Citrus Sinensis ID: 045430
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 309 | 2.2.26 [Sep-21-2011] | |||||||
| Q9STX2 | 388 | 3-oxo-Delta(4,5)-steroid | yes | no | 0.980 | 0.780 | 0.702 | 1e-130 | |
| Q6PQJ9 | 389 | 3-oxo-Delta(4,5)-steroid | N/A | no | 0.983 | 0.781 | 0.699 | 1e-126 | |
| O74913 | 405 | Uncharacterized protein C | yes | no | 0.944 | 0.720 | 0.257 | 9e-26 |
| >sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana GN=VEP1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/309 (70%), Positives = 264/309 (85%), Gaps = 6/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
+DT++KLS LTDVTH+FYVTW +R +E+ENCE NG+MLRNVL+++IP APNLRHVCLQTG
Sbjct: 86 EDTRSKLSPLTDVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPYAPNLRHVCLQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHY+GPF + R HD PFTED+PRL + NFYYTQEDILFEE++K + ++TWS+HR
Sbjct: 146 TKHYLGPFTNVDGPR-HDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIE---TVTWSIHR 201
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P++IFGFSPYS+MN+VGTLCVYAAICKHEG PLLFPGSK WEG+ ASDADLIAEQ IW
Sbjct: 202 PNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSKKAWEGFMTASDADLIAEQQIW 261
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFNC+N D+FKWKHLWK+LAEQF IE YG ++G+ + L E+M+GKE VW
Sbjct: 262 AAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEYGF-EEGKNLGLVEMMKGKERVW 320
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
E++VKENQLQ KL EV VWWFAD++L G ++DSMNKSKE+GFLGFRNS NSF++WID
Sbjct: 321 EEMVKENQLQEKKLEEVGVWWFADVIL-GVEGMIDSMNKSKEYGFLGFRNSNNSFISWID 379
Query: 301 KMKTYRIVP 309
K K ++IVP
Sbjct: 380 KYKAFKIVP 388
|
Involved in vascular strand development. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 21-acetyl cortexone, 2-cyclohexenone, but-1-en-3-one, ethyl acrylate, ethylmethacrylate, cortisone and canarigenone as substrates, lower activity with 3-methyl-2-cyclohexenone and 3,5,5-trimethyl-2-cyclohexenone as substrate, and no activity with canarigenin, canarigenin digitoxoside and pregnenolone. May be involved in the formation of 5-beta phytoecdysteroids. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3 |
| >sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1 SV=1 | Back alignment and function description |
|---|
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/309 (69%), Positives = 250/309 (80%), Gaps = 5/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
DD+QAKLS LTDVTH+FYVTWA+R TE ENCE N M RNVL +VIPN PNL+H+ LQTG
Sbjct: 86 DDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHY+GPFES+GKI HD P+TEDLPRL NFYY EDI+ EEVEK++G LTWSVHR
Sbjct: 146 RKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEG---LTWSVHR 202
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P IFGFSPYSMMN+VGTLCVYAAICKHEG L F G K W+GYS SDADLIAE HIW
Sbjct: 203 PGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIW 262
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFN SNGDVFKWKH WKVLAEQF + G ++G ++L+++M+GKE VW
Sbjct: 263 AAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV-GCGEYEEGVDLKLQDLMKGKEPVW 321
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
E+IV+EN L TKL +V +WWF D++L G LDSMNKSKEHGFLGFRNSKN+F++WID
Sbjct: 322 EEIVRENGLTPTKLKDVGIWWFGDVIL-GNECFLDSMNKSKEHGFLGFRNSKNAFISWID 380
Query: 301 KMKTYRIVP 309
K K Y+IVP
Sbjct: 381 KAKAYKIVP 389
|
Involved in cardenolide biosynthesis. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 4-androstene-3,17-dione, cortisol and cortisone as substrates, but not pregnenolone, 21-OH-pregnenolone or isoprogesterone. NADPH could not be replaced by NADH. Digitalis lanata (taxid: 49450) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 |
| >sp|O74913|YJ72_SCHPO Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.02c PE=4 SV=1 | Back alignment and function description |
|---|
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 153/345 (44%), Gaps = 53/345 (15%)
Query: 7 LSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSV-IPNAPNLRHVCLQTGGKHYV 65
L + + + ++ + E + CEVNG MLRN ++++ + + LR V L TG K Y
Sbjct: 70 LEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVILTTGLKFYG 129
Query: 66 GPFESFGKIRPHDTPFTEDLPRLNVT-----NFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
G++R P E R+ T NFYY QEDIL E +K +++
Sbjct: 130 ---LHLGEVR---LPMIETDIRVPETFSGTPNFYYVQEDILKEFSNGKK----WDYTIAM 179
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P+ I G S S MN T+ +YA +C+ P FPG++ + G+ S + LIA+ +W
Sbjct: 180 PNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIADFQLW 239
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIE--------NYGLPQDG-------- 224
E FN NGD+ W W +AE F +E ++ L +
Sbjct: 240 MTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYFGVEVPKNQFATDFTLSTEVTLSTPSPI 299
Query: 225 ------------------ERVRLEEIMRGK--EGVWEQIVKENQLQLTKLSEVAVWWFAD 264
++ L++ ++ K + W I + +L L EV W F D
Sbjct: 300 NLYEKELGIKHTPNSKIINQISLQQWVKQKKVQDAWRTIAEREKLNAHAL-EVGTWAFCD 358
Query: 265 MMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309
+ + ++ SM+K+++ G+ + ++ + F D++K + +P
Sbjct: 359 FLFGRTYNVISSMSKARKLGYTDYYDTFDGFKETFDELKKQKQIP 403
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 309 | ||||||
| 255538116 | 390 | conserved hypothetical protein [Ricinus | 0.983 | 0.779 | 0.737 | 1e-136 | |
| 358348859 | 390 | Progesterone 5-beta-reductase [Medicago | 0.987 | 0.782 | 0.728 | 1e-135 | |
| 358345490 | 809 | Progesterone 5-beta-reductase [Medicago | 0.980 | 0.374 | 0.726 | 1e-134 | |
| 388509364 | 390 | unknown [Medicago truncatula] | 0.987 | 0.782 | 0.721 | 1e-133 | |
| 358345496 | 390 | Progesterone 5-beta-reductase [Medicago | 0.987 | 0.782 | 0.721 | 1e-133 | |
| 356514451 | 388 | PREDICTED: uncharacterized protein C757. | 0.977 | 0.778 | 0.730 | 1e-132 | |
| 357456343 | 390 | Progesterone 5-beta-reductase [Medicago | 0.987 | 0.782 | 0.715 | 1e-132 | |
| 357437673 | 423 | hypothetical protein MTR_1g018610 [Medic | 0.977 | 0.713 | 0.720 | 1e-132 | |
| 124360762 | 387 | progesterone 5-beta-reductase, putative | 0.977 | 0.780 | 0.720 | 1e-131 | |
| 374085803 | 389 | putative progesterone 5-beta-reductase [ | 0.983 | 0.781 | 0.692 | 1e-131 |
| >gi|255538116|ref|XP_002510123.1| conserved hypothetical protein [Ricinus communis] gi|223550824|gb|EEF52310.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/308 (73%), Positives = 263/308 (85%), Gaps = 4/308 (1%)
Query: 2 DTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGG 61
+TQ+KLS+LTD+THIFYVTW +R +E ENCE+NG M RNVL++VIPNAPNLRH+CLQTG
Sbjct: 87 ETQSKLSQLTDITHIFYVTWTNRQSEDENCEINGLMFRNVLQAVIPNAPNLRHICLQTGA 146
Query: 62 KHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRP 121
KHYVGPFES GKI+ HD PFTEDLPRL+ NFYYT EDI+FEEV K++G LTWS+HRP
Sbjct: 147 KHYVGPFESLGKIQTHDPPFTEDLPRLDAPNFYYTLEDIMFEEVAKKEG---LTWSIHRP 203
Query: 122 HIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWA 181
IFGFSPYS+MN++GTLCVYA ICKHEG+PLLFPG+K W YSVASDADLIAE IWA
Sbjct: 204 DQIFGFSPYSLMNIIGTLCVYATICKHEGLPLLFPGTKAAWNCYSVASDADLIAEHQIWA 263
Query: 182 AVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWE 241
+VDPYA++EAFNC+NGDVFKWKH WKVLAEQF IE YG + +R+ L E+M+GKE VWE
Sbjct: 264 SVDPYAKDEAFNCNNGDVFKWKHFWKVLAEQFGIEEYGFEEGEKRLSLVEMMKGKEAVWE 323
Query: 242 QIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDK 301
+IV ENQLQ TKL EVAVWWF D+ML GG ++ SMNKSKEHGFLGFRNSKNSF +WIDK
Sbjct: 324 EIVSENQLQPTKLDEVAVWWFVDLML-GGEAVISSMNKSKEHGFLGFRNSKNSFASWIDK 382
Query: 302 MKTYRIVP 309
MK Y+IVP
Sbjct: 383 MKAYKIVP 390
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358348859|ref|XP_003638459.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|355504394|gb|AES85597.1| Progesterone 5-beta-reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/309 (72%), Positives = 265/309 (85%), Gaps = 4/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
++TQ KLS LTDVTHIFYV+W++RP+EAENCEVN AMLRNVL +VIPNAPNLRHV LQTG
Sbjct: 86 NETQTKLSVLTDVTHIFYVSWSNRPSEAENCEVNSAMLRNVLTAVIPNAPNLRHVSLQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
GKHY+GPF+ GKI H+ PFTEDLPRL+ NFYYTQEDILFEE +K++G L+WSVHR
Sbjct: 146 GKHYLGPFDLIGKINSHEPPFTEDLPRLDAPNFYYTQEDILFEETQKKEG---LSWSVHR 202
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P +IFGFSPYS+MN+VGTLCVYAAICKHEGVPL FPG+K WE YSVASDADLIAEQHIW
Sbjct: 203 PQVIFGFSPYSLMNLVGTLCVYAAICKHEGVPLKFPGTKGAWESYSVASDADLIAEQHIW 262
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFNCSNGDVF+WK LWKVLAEQF IE YG ++G R++L E+M+ K VW
Sbjct: 263 AAVDPYAKNEAFNCSNGDVFRWKQLWKVLAEQFGIEEYGFDEEGPRLKLSELMKDKGPVW 322
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
++IVKENQL+ TK+ EV WWF D+M GG +DSMNK+KEHGF+GFRN+KNS ++WID
Sbjct: 323 DEIVKENQLEATKIDEVGEWWFVDLMF-GGEGAVDSMNKAKEHGFVGFRNTKNSLISWID 381
Query: 301 KMKTYRIVP 309
K + Y+IVP
Sbjct: 382 KTRAYKIVP 390
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358345490|ref|XP_003636810.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|355502745|gb|AES83948.1| Progesterone 5-beta-reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/307 (72%), Positives = 263/307 (85%), Gaps = 4/307 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
++TQ KLS LTDVTHIFYV+W++RP+EAENCEVN AMLRNVL +VIPNAPNLRHV LQTG
Sbjct: 86 NETQTKLSVLTDVTHIFYVSWSNRPSEAENCEVNSAMLRNVLTAVIPNAPNLRHVSLQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
GKHY+GPF+ GKI H+ PFTEDLPRL+ NFYYTQEDILFEE +K++G L+WSVHR
Sbjct: 146 GKHYLGPFDLIGKINSHEPPFTEDLPRLDAPNFYYTQEDILFEETQKKEG---LSWSVHR 202
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P +IFGFSPYS+MN+VGTLCVYAAICKHEGVPL FPG+K WE YSVASDADLIAEQHIW
Sbjct: 203 PQVIFGFSPYSLMNLVGTLCVYAAICKHEGVPLKFPGTKGAWESYSVASDADLIAEQHIW 262
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFNCSNGDVF+WK LWKVLAEQF IE YG ++G R++L E+M+ K VW
Sbjct: 263 AAVDPYAKNEAFNCSNGDVFRWKQLWKVLAEQFGIEEYGFDEEGPRLKLSELMKDKGPVW 322
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
++IVKENQL+ TK+ EV WWF D+M GG +DSMNK+KEHGF+GFRN+KNS ++WID
Sbjct: 323 DEIVKENQLEATKIDEVGEWWFVDLMF-GGEGAVDSMNKAKEHGFVGFRNTKNSLISWID 381
Query: 301 KMKTYRI 307
K + Y+I
Sbjct: 382 KTRAYKI 388
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388509364|gb|AFK42748.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/309 (72%), Positives = 262/309 (84%), Gaps = 4/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
+DT KLS LTDVTH+FYV WASRPTEAENCE+NGAML+NVL +VIPNAPNLRHV +QTG
Sbjct: 86 NDTTTKLSVLTDVTHVFYVCWASRPTEAENCEINGAMLKNVLTAVIPNAPNLRHVSIQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
GKHYVGPFESFGKI+ H+ P+TED+PRL+ NFYYT ED+LFEE K++G ++WSVHR
Sbjct: 146 GKHYVGPFESFGKIKHHEPPYTEDMPRLDYHNFYYTLEDVLFEETGKKEG---VSWSVHR 202
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P +IFGFSPYSMMN++GT+CVYAAICKHEGVPL FPG+K WE Y +ASDADLIAEQHIW
Sbjct: 203 PLLIFGFSPYSMMNIIGTICVYAAICKHEGVPLRFPGTKLAWENYYMASDADLIAEQHIW 262
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AVDPYA+NEAFNCSNGDVF+WK LWKV+AEQF IE YG ++G R++L E+M+ K VW
Sbjct: 263 TAVDPYAKNEAFNCSNGDVFRWKQLWKVIAEQFGIEEYGFDEEGPRLKLTELMKDKGPVW 322
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
++IVKEN LQ+TKL EVA WWFAD GG DSMNKSKEHGFLGFRN+KNS +NWID
Sbjct: 323 DEIVKENGLQVTKLEEVAEWWFADACF-GGNGFTDSMNKSKEHGFLGFRNTKNSLINWID 381
Query: 301 KMKTYRIVP 309
+ + Y+IVP
Sbjct: 382 RTRAYKIVP 390
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358345496|ref|XP_003636813.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|358348865|ref|XP_003638462.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|355502748|gb|AES83951.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|355504397|gb|AES85600.1| Progesterone 5-beta-reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/309 (72%), Positives = 262/309 (84%), Gaps = 4/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
+D KLS LTDVTH+FYV WASRPTEAENCE+NGAML+NVL +VIPNAPNLRHV +QTG
Sbjct: 86 NDATTKLSVLTDVTHVFYVCWASRPTEAENCEINGAMLKNVLTAVIPNAPNLRHVSIQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
GKHYVGPFESFGKI+ H+ P+TED+PRL+ NFYYT ED+LFEE K++G ++WSVHR
Sbjct: 146 GKHYVGPFESFGKIKYHEPPYTEDMPRLDYHNFYYTLEDVLFEETGKKEG---VSWSVHR 202
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P +IFGFSPYSMMN++GT+CVYAAICKHEGVPL FPG+K WE Y +ASDADLIAEQHIW
Sbjct: 203 PLLIFGFSPYSMMNIIGTICVYAAICKHEGVPLRFPGTKLAWENYYMASDADLIAEQHIW 262
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFNCSNGDVF+WK LWKV+AEQF IE YG ++G R++L E+M+ K VW
Sbjct: 263 AAVDPYAKNEAFNCSNGDVFRWKQLWKVIAEQFGIEEYGFDEEGPRLKLTELMKDKGPVW 322
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
++IVKEN LQ+TKL EVA WWFAD GG DSMNKSKEHGFLGFRN+KNS +NWID
Sbjct: 323 DEIVKENGLQVTKLEEVAEWWFADACF-GGNGFTDSMNKSKEHGFLGFRNTKNSLINWID 381
Query: 301 KMKTYRIVP 309
+ + Y+IVP
Sbjct: 382 RTRAYKIVP 390
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356514451|ref|XP_003525919.1| PREDICTED: uncharacterized protein C757.02c-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/308 (73%), Positives = 259/308 (84%), Gaps = 6/308 (1%)
Query: 2 DTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGG 61
D +AKLS LTDVTH+F+V+W +R TEAENCEVNGAML+NVLR+VIPNAPNLRHV LQTGG
Sbjct: 87 DAEAKLSALTDVTHVFFVSWTNRSTEAENCEVNGAMLQNVLRAVIPNAPNLRHVSLQTGG 146
Query: 62 KHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRP 121
KHY+GPFE GKI H+ PF ED+PRL+ NFYYTQEDILFEE K++G LTWSVHRP
Sbjct: 147 KHYIGPFEFIGKIESHEPPFAEDMPRLDAPNFYYTQEDILFEETAKKEG---LTWSVHRP 203
Query: 122 HIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWA 181
+IFGFSPYS+MN++GTL VYAAICKHEGVPL FPG++ WE YS ASDADLIAEQHIWA
Sbjct: 204 QVIFGFSPYSLMNMIGTLSVYAAICKHEGVPLRFPGTRGAWESYSCASDADLIAEQHIWA 263
Query: 182 AVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWE 241
AVDPYARNEAFNCSNGDVF+WKHLWKVLAEQF IE YG ++G + L E+M+ K VW+
Sbjct: 264 AVDPYARNEAFNCSNGDVFRWKHLWKVLAEQFGIEEYGFEEEG--LSLSELMKDKGPVWD 321
Query: 242 QIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDK 301
+IV ENQL TKL EVA WWF D++ G +LDSMNK+KEHGFLGFRNSKNSF++WIDK
Sbjct: 322 EIVSENQLLPTKLDEVADWWFVDLIFSGEG-MLDSMNKAKEHGFLGFRNSKNSFISWIDK 380
Query: 302 MKTYRIVP 309
K Y+IVP
Sbjct: 381 TKAYKIVP 388
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357456343|ref|XP_003598452.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|355487500|gb|AES68703.1| Progesterone 5-beta-reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 221/309 (71%), Positives = 260/309 (84%), Gaps = 4/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
+D KLS LTDVTH+FYV WASRPTEAENCE+NG ML+N L +VIPNAPNLRHV +QTG
Sbjct: 86 NDATTKLSVLTDVTHVFYVCWASRPTEAENCEINGTMLKNALTAVIPNAPNLRHVSIQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
GKHYVGPFESFGKI+ H+ P+TED+PRL+ NFYYT ED+LFEE K++G ++WSVHR
Sbjct: 146 GKHYVGPFESFGKIKYHEPPYTEDMPRLDYHNFYYTLEDVLFEETGKKEG---VSWSVHR 202
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P +IFGFSPYSMMN++GT+CVYAAICKHEGVPL FPG+K WE Y +ASDADLIAEQHIW
Sbjct: 203 PLLIFGFSPYSMMNIIGTICVYAAICKHEGVPLRFPGTKLAWENYYMASDADLIAEQHIW 262
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFNCSNGDVF+WK LWKV+AEQF IE YG ++G R++L E+M+ K VW
Sbjct: 263 AAVDPYAKNEAFNCSNGDVFRWKQLWKVIAEQFGIEEYGFDEEGPRLKLTELMKDKGPVW 322
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
++IVKEN LQ+TKL EVA WWFAD GG DSMNKSKEHGFLGFRN+KNS +NWID
Sbjct: 323 DEIVKENGLQVTKLEEVAEWWFADACF-GGNGFTDSMNKSKEHGFLGFRNTKNSLINWID 381
Query: 301 KMKTYRIVP 309
+ + Y+IVP
Sbjct: 382 RTRAYKIVP 390
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357437673|ref|XP_003589112.1| hypothetical protein MTR_1g018610 [Medicago truncatula] gi|355478160|gb|AES59363.1| hypothetical protein MTR_1g018610 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/311 (72%), Positives = 265/311 (85%), Gaps = 9/311 (2%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
+D + KLS LTDVTHIFYV+W SRPTEA+NCEVNGAMLRNVL+++IPNAPNL HV LQTG
Sbjct: 120 NDVELKLSPLTDVTHIFYVSWTSRPTEAQNCEVNGAMLRNVLQALIPNAPNLSHVSLQTG 179
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHYVGPFE GKI+PH++PFTED+PRL+ NFYYT EDILFEEV K+KG TW ++R
Sbjct: 180 AKHYVGPFEIIGKIKPHESPFTEDVPRLDTPNFYYTLEDILFEEVGKKKG---TTWFINR 236
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P +IFGFSPYSMMN++GTLCVYAAICKHEG+PL FPGSK WE YS ASDA+LI+EQHIW
Sbjct: 237 PQVIFGFSPYSMMNLIGTLCVYAAICKHEGLPLRFPGSKGAWECYSTASDANLISEQHIW 296
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AVDP A+NEAFNCSNGDVF+WKHLWKVLAE+FEI++YG ++G +RL ++M+ K GVW
Sbjct: 297 GAVDPNAKNEAFNCSNGDVFRWKHLWKVLAERFEIDDYGF-EEGSELRLSDLMKDKGGVW 355
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMM--LDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNW 298
E+IV+EN+L TKL EV WWFAD M ++G +LDSMNKSKEHGFLGFRNSKNSF++W
Sbjct: 356 EEIVRENELLYTKLEEVGDWWFADFMFRVEG---VLDSMNKSKEHGFLGFRNSKNSFISW 412
Query: 299 IDKMKTYRIVP 309
IDK K Y+IVP
Sbjct: 413 IDKTKAYKIVP 423
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|124360762|gb|ABD33275.2| progesterone 5-beta-reductase, putative [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/311 (72%), Positives = 265/311 (85%), Gaps = 9/311 (2%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
+D + KLS LTDVTHIFYV+W SRPTEA+NCEVNGAMLRNVL+++IPNAPNL HV LQTG
Sbjct: 84 NDVELKLSPLTDVTHIFYVSWTSRPTEAQNCEVNGAMLRNVLQALIPNAPNLSHVSLQTG 143
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHYVGPFE GKI+PH++PFTED+PRL+ NFYYT EDILFEEV K+KG TW ++R
Sbjct: 144 AKHYVGPFEIIGKIKPHESPFTEDVPRLDTPNFYYTLEDILFEEVGKKKG---TTWFINR 200
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P +IFGFSPYSMMN++GTLCVYAAICKHEG+PL FPGSK WE YS ASDA+LI+EQHIW
Sbjct: 201 PQVIFGFSPYSMMNLIGTLCVYAAICKHEGLPLRFPGSKGAWECYSTASDANLISEQHIW 260
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AVDP A+NEAFNCSNGDVF+WKHLWKVLAE+FEI++YG ++G +RL ++M+ K GVW
Sbjct: 261 GAVDPNAKNEAFNCSNGDVFRWKHLWKVLAERFEIDDYGF-EEGSELRLSDLMKDKGGVW 319
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMM--LDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNW 298
E+IV+EN+L TKL EV WWFAD M ++G +LDSMNKSKEHGFLGFRNSKNSF++W
Sbjct: 320 EEIVRENELLYTKLEEVGDWWFADFMFRVEG---VLDSMNKSKEHGFLGFRNSKNSFISW 376
Query: 299 IDKMKTYRIVP 309
IDK K Y+IVP
Sbjct: 377 IDKTKAYKIVP 387
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|374085803|gb|AEY82380.1| putative progesterone 5-beta-reductase [Lunaria annua] | Back alignment and taxonomy information |
|---|
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/309 (69%), Positives = 267/309 (86%), Gaps = 5/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
DD ++KLS LTDVTH+FYVTW +RP+E ++CE NG+MLRNVLR+++PNAPNLRHVCLQTG
Sbjct: 86 DDARSKLSPLTDVTHVFYVTWTNRPSEHDSCEANGSMLRNVLRAIVPNAPNLRHVCLQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHY+GPF++ GK + HD PFTED+PRL + NFYYT EDILFEE++K++G ++WS+HR
Sbjct: 146 TKHYLGPFDNLGKSQHHDPPFTEDMPRLQIQNFYYTLEDILFEEIKKKEG---VSWSIHR 202
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P+ IFGFSPYS+MN+VGTLCVYAAICKHEG PL+FPGSK WEG++ ASDADL+AEQ IW
Sbjct: 203 PNTIFGFSPYSLMNIVGTLCVYAAICKHEGSPLVFPGSKKAWEGFTAASDADLVAEQQIW 262
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFNC+N D+FKWKH+WKVLAEQF IE YG ++G+ + L ++M+GKE VW
Sbjct: 263 AAVDPYAKNEAFNCNNADIFKWKHMWKVLAEQFGIEEYGF-EEGKNLGLVQMMKGKERVW 321
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
E++VKENQLQ +L EV VWWFAD++L GG ++DSMNKSKEHGFLGFRNS NSF +W+D
Sbjct: 322 EEMVKENQLQERRLEEVGVWWFADVIL-GGEGMIDSMNKSKEHGFLGFRNSNNSFSSWVD 380
Query: 301 KMKTYRIVP 309
K K ++IVP
Sbjct: 381 KYKAFKIVP 389
|
Source: Lunaria annua Species: Lunaria annua Genus: Lunaria Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 309 | ||||||
| TAIR|locus:2135932 | 388 | VEP1 "VEIN PATTERNING 1" [Arab | 0.980 | 0.780 | 0.689 | 4.1e-120 | |
| UNIPROTKB|Q48IK0 | 353 | PSPPH_2587 "Aldo-keto reductas | 0.935 | 0.818 | 0.415 | 8.1e-60 | |
| UNIPROTKB|Q882D3 | 353 | PSPTO_2695 "Uncharacterized pr | 0.974 | 0.852 | 0.406 | 8.1e-60 | |
| TAIR|locus:2178793 | 386 | AT5G58750 [Arabidopsis thalian | 0.980 | 0.784 | 0.345 | 5.4e-47 | |
| UNIPROTKB|Q4K649 | 386 | PFL_5207 "Uncharacterized prot | 0.948 | 0.759 | 0.325 | 3.5e-36 | |
| ASPGD|ASPL0000051603 | 376 | AN9028 [Emericella nidulans (t | 0.944 | 0.776 | 0.322 | 5.2e-33 | |
| POMBASE|SPCC757.02c | 405 | SPCC757.02c "epimarase (predic | 0.647 | 0.493 | 0.324 | 7.2e-29 | |
| ASPGD|ASPL0000017248 | 424 | AN4177 [Emericella nidulans (t | 0.695 | 0.507 | 0.291 | 3.1e-21 | |
| ASPGD|ASPL0000040978 | 437 | AN2921 [Emericella nidulans (t | 0.556 | 0.393 | 0.355 | 6.6e-20 |
| TAIR|locus:2135932 VEP1 "VEIN PATTERNING 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 213/309 (68%), Positives = 256/309 (82%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
+DT++KLS LTDVTH+FYVTW +R +E+ENCE NG+MLRNVL+++IP APNLRHVCLQTG
Sbjct: 86 EDTRSKLSPLTDVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPYAPNLRHVCLQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHY+GPF + R HD PFTED+PRL + NFYYTQEDILFEE++K + ++TWS+HR
Sbjct: 146 TKHYLGPFTNVDGPR-HDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIE---TVTWSIHR 201
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P++IFGFSPYS+MN+VGTLCVYAAICKHEG PLLFPGSK WEG+ ASDADLIAEQ IW
Sbjct: 202 PNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSKKAWEGFMTASDADLIAEQQIW 261
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFNC+N D+FKWKHLWK+LAEQF IE YG ++G+ + L E+M+GKE VW
Sbjct: 262 AAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEYGF-EEGKNLGLVEMMKGKERVW 320
Query: 241 EQIVKENQLQLTKLSEVAVWWFAXXXXXXXXXXXXSMNKSKEHGFLGFRNSKNSFVNWID 300
E++VKENQLQ KL EV VWWFA SMNKSKE+GFLGFRNS NSF++WID
Sbjct: 321 EEMVKENQLQEKKLEEVGVWWFADVILGVEGMID-SMNKSKEYGFLGFRNSNNSFISWID 379
Query: 301 KMKTYRIVP 309
K K ++IVP
Sbjct: 380 KYKAFKIVP 388
|
|
| UNIPROTKB|Q48IK0 PSPPH_2587 "Aldo-keto reductase family protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 123/296 (41%), Positives = 175/296 (59%)
Query: 14 THIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGK 73
TH+F TW+ + TEAEN VN AM+RNVL +V P A +++HV L TG KHY+GPFE++GK
Sbjct: 65 THVFITTWSRQATEAENIRVNAAMVRNVLDAVRP-AGSVKHVALVTGLKHYLGPFEAYGK 123
Query: 74 IRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM 133
TPF E RL++ NFYY QED +F EK TWSVHRPH + G + + M
Sbjct: 124 GTLPQTPFRETQARLDIENFYYAQEDEVFAAAEKD----GFTWSVHRPHTVTGVAVGNAM 179
Query: 134 NVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFN 193
N+ TL VYA+ICK G P +FPGS+ W+ + +DA +A Q +WAA P A N+AFN
Sbjct: 180 NMATTLAVYASICKATGRPFVFPGSRVQWDSLTDMTDARQLAHQQLWAATTPAAANQAFN 239
Query: 194 CSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTK 253
+NGDVF+W +W +AE F+++ P E LE M + W IV+E+QL+
Sbjct: 240 ITNGDVFRWSWMWGQIAEYFDLQPADFPS--EPAPLETQMADDQAAWTDIVREHQLKEGD 297
Query: 254 LSEVAVWWFAXXXXXXXXXXXXSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309
++ + W M+KS++ GF F+ S ++F +K++ R++P
Sbjct: 298 INRLISPWHTDADLGRPIEVVTDMSKSRKLGFTAFQASDDAFFEVFEKLRRDRLIP 353
|
|
| UNIPROTKB|Q882D3 PSPTO_2695 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 126/310 (40%), Positives = 182/310 (58%)
Query: 2 DTQAKLSKLTDV--THIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQT 59
D + + L D+ THIF TW+ + TEAEN VN AM+RNVL +V P A +++HV L T
Sbjct: 51 DPASVTAALADLRPTHIFITTWSRQATEAENIRVNAAMVRNVLDAVRP-AGSVKHVALVT 109
Query: 60 GGKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVH 119
G KHY+GPFE++GK TPF E PRL++ NFYY QED +F EK + TWSVH
Sbjct: 110 GLKHYLGPFEAYGKGTLPQTPFRESQPRLDIENFYYAQEDEVFAAAEKDR----FTWSVH 165
Query: 120 RPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHI 179
RPH + G + + MN+ TL VYA+ICK G P +FPGS+ W+ + +DA +A Q +
Sbjct: 166 RPHTVTGVAVGNAMNMATTLAVYASICKATGRPFVFPGSRVQWDSLTDMTDARQLAHQQL 225
Query: 180 WAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGV 239
WAA P A N+AFN +NGDVF+W +W +A F +E P + LE M +
Sbjct: 226 WAATTPAAANQAFNITNGDVFRWSWMWGQIAGYFGLEPADFPS--QPALLETQMADDQTA 283
Query: 240 WEQIVKENQLQLTKLSEVAVWWFAXXXXXXXXXXXXSMNKSKEHGFLGFRNSKNSFVNWI 299
W +I +E+QL+ + ++ + W M+KS++ GF F+ S ++F
Sbjct: 284 WTRIAQEHQLKESDINRLISPWHTDADLGRPIEVVTDMSKSRKLGFTAFQASDDAFFEVF 343
Query: 300 DKMKTYRIVP 309
+K++ R++P
Sbjct: 344 EKLRRDRLIP 353
|
|
| TAIR|locus:2178793 AT5G58750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 110/318 (34%), Positives = 174/318 (54%)
Query: 2 DTQAKLSKLTD-VTHIFYVTWASR-PTEAENCEV-NGAMLRNVLRSVIPNAPNLRHVCLQ 58
+T+ +LS L D V+H+F+VTW+ P + + C V N ML N L +++PNA L+H LQ
Sbjct: 73 ETKQRLSPLQDIVSHVFWVTWSGEFPLDTDECCVQNKTMLMNALDAILPNAKRLKHFSLQ 132
Query: 59 TGGKHYVGPFESFGKIRPHDTP---FTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSL 114
TG KHYV E R + ++E+ PR + NFYY ED+L E++ + S+
Sbjct: 133 TGMKHYVSLVEET-MARGEGSSLYYYSEECPRKSSGKNFYYVLEDLLKEKITRS----SV 187
Query: 115 TWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWE-GYSVASDADL 173
WSV RP ++ G S ++ N +G+LCVY A+CK+ +P +F G+++CWE Y SD++L
Sbjct: 188 VWSVQRPGLLMGSSSRTLYNFMGSLCVYGAMCKYLNLPFVFGGTRECWEESYIDGSDSNL 247
Query: 174 IAEQHIWAAVDPYARN--EAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEE 231
+AEQHI+AA R EAFN NG F WK +W + ++ ++ E
Sbjct: 248 VAEQHIFAATSGKVREKGEAFNAINGVGFTWKEIWPEIGKKLGVQVNETTMFDEGFWFGR 307
Query: 232 IMRGKEGVWEQIVKENQLQLTKLSEVAVWWFAXXXXXXXXXXXXSMNKSKEHGFLGFRNS 291
M ++ VW++IV + +L T++ ++A W+F K GF +
Sbjct: 308 EMVERKHVWDEIVVKEKLVRTEIEDLANWYFLDALFRCPFKLLGKREKVDRFGFKRKYRT 367
Query: 292 KNSFVNWIDKMKTYRIVP 309
+S + WID M+ +++P
Sbjct: 368 LDSVLYWIDVMRDEKLIP 385
|
|
| UNIPROTKB|Q4K649 PFL_5207 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 100/307 (32%), Positives = 153/307 (49%)
Query: 3 TQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGK 62
T + L VT + + ++ R + A N AML + L+++ LR V L GGK
Sbjct: 94 TARAFAGLGSVTDLVFCAYSERESMAATVAPNLAMLEHSLKALRQAGARLRQVVLIGGGK 153
Query: 63 HYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPH 122
Y G E G + TP E PR FY QED+L+ E E R+G W+V RP
Sbjct: 154 SY-G--EHLGSYK---TPAKESDPRFMGPIFYNDQEDLLWHEAE-REG---FAWTVLRPD 203
Query: 123 IIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAA 182
+ G S S MN++ + +AAI + +PL FPGS W A+D+ ++A+ +WA
Sbjct: 204 GVMGPSLNSPMNILTGIASFAAISQALNLPLRFPGSLQAWSALHQATDSRVLAQAVLWAL 263
Query: 183 VDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQ 242
P A+ + FN +NGD F+W+HLW +A F + + PQ + L M K +W +
Sbjct: 264 TSPNAQQQVFNVTNGDHFRWQHLWPQIAGFFGLAS-AAPQP---MNLGVQMADKAPLWAR 319
Query: 243 IVKENQLQLTKLSEVAVWWFAXXXXXXXXXXXXSMNKSKEHGFLGFRNSKNSFVNWIDKM 302
IV+E QL+ T ++A W F S K ++ GF G +S S + + ++
Sbjct: 320 IVQEQQLRPTPWEQIAAWPFVDGWLNTGYDMVQSTIKIRQAGFTGCIDSHQSVLEQLQRL 379
Query: 303 KTYRIVP 309
+ YR++P
Sbjct: 380 RDYRLIP 386
|
|
| ASPGD|ASPL0000051603 AN9028 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 102/316 (32%), Positives = 157/316 (49%)
Query: 8 SKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGP 67
S+ DVTH ++ ++ + AE E N ++ N L +++ A L++ LQTGGK+Y
Sbjct: 71 SQCADVTHAYFSSYVHKDDFAELNEANRSLFENFLNALVDVAKGLQNCTLQTGGKYYNV- 129
Query: 68 FESFGKIRPHDTPFTEDLPRL--NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIF 125
+RP P E PRL NFYY QED L EK++G + TW+V RP I
Sbjct: 130 -----HVRPVPWPAHEGHPRLVRAEENFYYHQEDFL---AEKQRGS-NWTWNVIRPEAII 180
Query: 126 GFSPY-SMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD 184
G++ + MN T+ +Y I K GV P + + G SDA LIA+ I+A+
Sbjct: 181 GYTTKPNGMNEALTIALYFLINKELGVEAPMPTNAAYFNGVDDVSDARLIADLTIYASTH 240
Query: 185 PYARNEAFNCSNGDVFKWKHLWKVLAEQFEIE---NYGLPQ----DGER---VRLEEIMR 234
NEAFN +NGDVF W+++W LA+ F + N + +GE + LE+ +
Sbjct: 241 KNCANEAFNVTNGDVFSWRYMWPRLADWFGAKASSNQSFNRTSFKEGETHLDLNLEQWAQ 300
Query: 235 GKEGVWEQIVKENQLQLTKLS-EVAVWWFAXXXXXXXXXXXXSMNKSKEHGFLGFRNSKN 293
K VW ++ + L+K S + W F S+NK+++ G+ G +S +
Sbjct: 301 DKREVWNRLCDKAGSPLSKASFDAGTWTFQDWVFQRTWSSPLSINKARKFGWTGHLDSFD 360
Query: 294 SFVNWIDKMKTYRIVP 309
SFV+ + K +P
Sbjct: 361 SFVDAFKRFKELGQIP 376
|
|
| POMBASE|SPCC757.02c SPCC757.02c "epimarase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 264 (98.0 bits), Expect = 7.2e-29, Sum P(2) = 7.2e-29
Identities = 70/216 (32%), Positives = 105/216 (48%)
Query: 7 LSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSV-IPNAPNLRHVCLQTGGKHYV 65
L + + + ++ + E + CEVNG MLRN ++++ + + LR V L TG K Y
Sbjct: 70 LEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVILTTGLKFY- 128
Query: 66 GPFESFGKIRPHDTPFTEDLPRLNVT-----NFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
G G++R P E R+ T NFYY QEDIL E +K +++
Sbjct: 129 GLH--LGEVR---LPMIETDIRVPETFSGTPNFYYVQEDILKEFSNGKKWD----YTIAM 179
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P+ I G S S MN T+ +YA +C+ P FPG++ + G+ S + LIA+ +W
Sbjct: 180 PNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIADFQLW 239
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIE 216
E FN NGD+ W W +AE F +E
Sbjct: 240 MTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYFGVE 275
|
|
| ASPGD|ASPL0000017248 AN4177 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 221 (82.9 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 69/237 (29%), Positives = 106/237 (44%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAP--NLRHVCLQ 58
DD LS ++ ++++ + + AE C +NG M+ N ++++ L+ L
Sbjct: 57 DDMAKTLSGIS-AEYVYFCAYMAHDDPAELCRINGTMISNFIQALEKTGAISKLKRFILT 115
Query: 59 TGGKHYVGPFESFGKIRPHDTPFTEDLPRLN--------VTNFYYTQEDILFEEVEKRKG 110
G K Y G + PF E+ P L NFY+TQ+ IL E + +G
Sbjct: 116 CGFKQYS---VHLGNAKQ---PFHEEDPVLEGEVGGETWPPNFYFTQQRILAEAAARSEG 169
Query: 111 PLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH-EGVPLLFPGSKDCWEGYSVAS 169
W V P + GF+ + MN + +Y + K G L FPG K + ++ +
Sbjct: 170 QWD--WVVTLPQDVLGFARGNFMNEATAVGLYCTVSKVLPGSELPFPGCKAGYFAFNTWT 227
Query: 170 DADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQF--EIENYGLPQDG 224
A+L A+ +WAA A N FN NGD W+ LW LA +F +I N P G
Sbjct: 228 SANLHAKFCLWAATAKGAGNNIFNVINGDTESWQDLWPRLARRFGCKIPNPMFPHGG 284
|
|
| ASPGD|ASPL0000040978 AN2921 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 217 (81.4 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 65/183 (35%), Positives = 84/183 (45%)
Query: 32 EVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNVT 91
+VN ML N L ++ + + +QTG KHY F I P P E R+++
Sbjct: 134 KVNSTMLNNFLGALQEANLHPKRFLIQTGAKHY-----GF-HIGPSTNPSFETDRRVSLE 187
Query: 92 -NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150
NFYY QED L G + W+V RP I G +N + L +YAAI H
Sbjct: 188 QNFYYLQEDALAAYCA---GT-GVGWNVVRPSYIIGAVRDGALNHMIGLAIYAAIQAHLN 243
Query: 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLA 210
PL FPG W+ S A L A WA + P A N+AFN +G F W W LA
Sbjct: 244 QPLYFPGDYIAWDREVCQSTALLNAYFEEWAVLTPDAENQAFNIQDGLPFTWGRFWPNLA 303
Query: 211 EQF 213
E +
Sbjct: 304 EWY 306
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9STX2 | VEP1_ARATH | 1, ., 3, ., 1, ., 3 | 0.7022 | 0.9805 | 0.7809 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 309 | |||
| cd08948 | 308 | cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta | 1e-113 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 2e-09 |
| >gnl|CDD|187652 cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 329 bits (845), Expect = e-113
Identities = 121/254 (47%), Positives = 147/254 (57%), Gaps = 12/254 (4%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
+AKL L DVTH+FY + RP EAE EVNGAMLRN L ++ P +PNL+HV LQTG
Sbjct: 59 TVLRAKLPGLEDVTHVFYAAYIERPDEAELVEVNGAMLRNFLDALEPASPNLKHVVLQTG 118
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHY F RP P ED PRL NFYY QED+LFE + + TWSV R
Sbjct: 119 TKHYGVHLGPFKTPRPE-EPAREDPPRLLPPNFYYDQEDLLFEAAKGKGW----TWSVLR 173
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P I GF+P + MN+ TL VYAAIC+ G PL FPGS W S A+DA L+A IW
Sbjct: 174 PDAIIGFAPGNAMNLALTLAVYAAICRELGAPLRFPGSPAAWNALSDATDARLLARFTIW 233
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYG-----LPQDGERVRLEEIMRG 235
AA P A NEAFN +NGDVF+WK LW LAE F +E + EE+M
Sbjct: 234 AATHPEAANEAFNVTNGDVFRWKELWPRLAEYFGLEGAPPEPEAEAGADKAPVWEELMAD 293
Query: 236 KE--GVWEQIVKEN 247
W+++V+ +
Sbjct: 294 HGLQAAWDELVERH 307
|
5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 2e-09
Identities = 37/193 (19%), Positives = 54/193 (27%), Gaps = 68/193 (35%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
D + + V + ++ A R T CEV+ RNVL + G
Sbjct: 51 RDLDSLSDAVQGVDVVIHLAGAPRDTRD-FCEVDVEGTRNVLEAAKEA-----------G 98
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KH++ F S TE P E +L E SL +++ R
Sbjct: 99 VKHFI--FISSLGAYGDLHEETEPSPSSPYLAVKAKTEAVLREA--------SLPYTIVR 148
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P +I+G +A
Sbjct: 149 PGVIYG----------------------------------------------DLARAIAN 162
Query: 181 AAVDPYARNEAFN 193
A V P +NE FN
Sbjct: 163 AVVTPGKKNETFN 175
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 309 | |||
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.98 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.97 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.97 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.97 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.97 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.97 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.97 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.97 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.97 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.97 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.97 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.97 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.97 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.97 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.97 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.97 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.97 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.97 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.97 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.96 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.96 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.96 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.96 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.96 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.96 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.96 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.96 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.95 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.95 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.95 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.94 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.93 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.93 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.93 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.9 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.9 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.89 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.89 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.89 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.87 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.87 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.86 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.85 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.84 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.83 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.82 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.82 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.78 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.77 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.73 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.71 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.7 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.67 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.59 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.59 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.56 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.55 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.54 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.39 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.36 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.26 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.09 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.08 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.06 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.04 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.02 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.01 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.98 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.96 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.93 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.92 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.92 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.8 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.78 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.76 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.72 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.72 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.68 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.64 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.63 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.62 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.58 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.57 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.53 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.53 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.49 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.48 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.46 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.44 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 98.43 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 98.43 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.43 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.43 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.41 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.41 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.39 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.39 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.36 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.36 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.35 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.34 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.3 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.29 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.26 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.25 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.23 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.22 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.19 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.19 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.16 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.15 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.13 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.12 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.12 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.11 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.11 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.1 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.09 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.02 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.02 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.01 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.01 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.01 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 98.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.99 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.98 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.98 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 97.98 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 97.98 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 97.98 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.97 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.95 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.94 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.92 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.91 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.9 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.88 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.88 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.86 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.86 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.86 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.85 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 97.83 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.8 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.78 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 97.77 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.77 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 97.77 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.74 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.73 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.69 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 97.66 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.64 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.64 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 97.63 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.6 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.59 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.59 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.58 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.57 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.56 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.55 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.52 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.52 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.49 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.47 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.45 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.43 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.41 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.4 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 97.4 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 97.37 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.36 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 97.36 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.34 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.34 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.33 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.3 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.29 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.24 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.21 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.21 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.2 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 97.2 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.2 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.18 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 97.15 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.14 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.12 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.09 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.07 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.02 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 97.01 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 96.99 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 96.98 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 96.95 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 96.91 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.87 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.86 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 96.85 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.85 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.81 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 96.81 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.78 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.78 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.78 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.78 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 96.73 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 96.71 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 96.62 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.61 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 96.58 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 96.57 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 96.57 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 96.55 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 96.54 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 96.53 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 96.48 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 96.38 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 96.34 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 96.34 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 96.32 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 96.22 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 95.99 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 95.98 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 95.87 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.82 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 95.77 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 95.75 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 95.68 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.64 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 95.61 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 95.57 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.53 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.47 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 95.38 | |
| PLN00106 | 323 | malate dehydrogenase | 95.35 | |
| PLN00015 | 308 | protochlorophyllide reductase | 95.17 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 95.01 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.01 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.01 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 94.77 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 94.77 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.73 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 94.69 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.68 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 94.59 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.49 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 94.19 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 93.49 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 93.47 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 93.37 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 93.1 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 93.08 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 92.24 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 91.93 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 91.82 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 90.62 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 90.42 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 90.28 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 89.66 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 89.18 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 88.83 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 87.58 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 86.64 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 86.5 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 86.4 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 84.99 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 82.46 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 81.95 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 80.34 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 80.08 |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=266.75 Aligned_cols=239 Identities=13% Similarity=0.021 Sum_probs=187.5
Q ss_pred CccEEEEeec-ccCC----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTW-ASRP----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~-~~~~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
.+|+|+|+|| .+++ +|+.|.++||.||.|||||+++... --||+|+||-.|||.- .. ....++|++|
T Consensus 74 ~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~-~frf~HISTDEVYG~l--~~-----~~~~FtE~tp 145 (340)
T COG1088 74 QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWG-KFRFHHISTDEVYGDL--GL-----DDDAFTETTP 145 (340)
T ss_pred CCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcc-cceEEEeccccccccc--cC-----CCCCcccCCC
Confidence 5899999999 4444 8899999999999999999999842 2489999999999964 11 1235999999
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccc
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWE 163 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~ 163 (309)
..|. | .||-+...+++.+.. .+| +|++|.|+.|.|||.+- ....+++.|..+| .|.|+|++|+|.
T Consensus 146 ~~PsSPYSASKAasD~lVray~~-TYg---lp~~ItrcSNNYGPyqf--pEKlIP~~I~nal---~g~~lpvYGdG~--- 213 (340)
T COG1088 146 YNPSSPYSASKAASDLLVRAYVR-TYG---LPATITRCSNNYGPYQF--PEKLIPLMIINAL---LGKPLPVYGDGL--- 213 (340)
T ss_pred CCCCCCcchhhhhHHHHHHHHHH-HcC---CceEEecCCCCcCCCcC--chhhhHHHHHHHH---cCCCCceecCCc---
Confidence 9987 6 456666667777777 589 99999999999999873 2233445454443 599999999999
Q ss_pred cceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHH
Q 045430 164 GYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQI 243 (309)
Q Consensus 164 ~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
|.||++||+|-++|+-+.+.+. ..||+|||+.+.+.+-.|+.+.|++.+|...+.- -.+..++.++
T Consensus 214 ~iRDWl~VeDh~~ai~~Vl~kg-~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~------~~li~~V~DR------- 279 (340)
T COG1088 214 QIRDWLYVEDHCRAIDLVLTKG-KIGETYNIGGGNERTNLEVVKTICELLGKDKPDY------RDLITFVEDR------- 279 (340)
T ss_pred ceeeeEEeHhHHHHHHHHHhcC-cCCceEEeCCCccchHHHHHHHHHHHhCccccch------hhheEeccCC-------
Confidence 8999999999999977777654 4599999999999999999999999999764420 0111234332
Q ss_pred HHHhCCCcccccccchhhHHHHHhhcccccccChhhHH-hcCCCCcCChHHHHHHHHHHHHHCCC
Q 045430 244 VKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSK-EHGFLGFRNSKNSFVNWIDKMKTYRI 307 (309)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar-~lGf~p~~~~~~gl~~t~~~~r~~~~ 307 (309)
|+. .++..+|.+|++ +|||.|++++++||++|++||.++.|
T Consensus 280 -------pGH----------------D~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~~ 321 (340)
T COG1088 280 -------PGH----------------DRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNEW 321 (340)
T ss_pred -------CCC----------------ccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhchH
Confidence 222 124568999975 58999999999999999999998764
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=271.38 Aligned_cols=240 Identities=11% Similarity=0.043 Sum_probs=174.3
Q ss_pred CCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
++++|+|||+|+... .++.++.++|+.||.|+|++|++. +++||||+||++|||.. ...|..|+
T Consensus 88 ~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v~~SS~~vyg~~---------~~~~~~e~ 156 (348)
T PRK15181 88 CKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA--HVSSFTYAASSSTYGDH---------PDLPKIEE 156 (348)
T ss_pred hhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeechHhhCCC---------CCCCCCCC
Confidence 346899999998432 266778999999999999999986 79999999999999953 25567787
Q ss_pred CCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--chhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 85 LPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--MNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 85 ~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
++..|. + .+|...|.++..+..+ .+ ++++++||++||||++... +..+.+..+... ..|.++.+.|+|
T Consensus 157 ~~~~p~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~---~~~~~i~~~g~g 229 (348)
T PRK15181 157 RIGRPLSPYAVTKYVNELYADVFARS-YE---FNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSL---LKDEPIYINGDG 229 (348)
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHH-hC---CCEEEEEecceeCcCCCCCCccccCHHHHHHHH---HcCCCcEEeCCC
Confidence 765544 2 3455566666666553 57 9999999999999987421 222222222222 236678888888
Q ss_pred cccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccH
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKE 237 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
. +.+|++||+|+|+++++++..+ ...|++|||++|+.+|++|+.+.+++.++...... ..... .+..
T Consensus 230 ~---~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~----~~~~~-~~~~--- 298 (348)
T PRK15181 230 S---TSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQ----SRAEP-IYKD--- 298 (348)
T ss_pred C---ceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccc----cCCCc-ccCC---
Confidence 7 7799999999999988877543 24689999999999999999999999998432110 00000 0000
Q ss_pred HHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 238 GVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
..+..+ ....+|++|+++ +||+|+++++||++++++|++..
T Consensus 299 -----------~~~~~~----------------~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~ 340 (348)
T PRK15181 299 -----------FRDGDV----------------KHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK 340 (348)
T ss_pred -----------CCCCcc----------------cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 001111 134689999987 79999999999999999999764
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=246.34 Aligned_cols=234 Identities=13% Similarity=0.116 Sum_probs=179.7
Q ss_pred CccEEEEeecc-----cCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWA-----SRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~-----~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
.+|.|+|+|+. +..+|-+|++.||.||.+||++|+++ ++++|||.||.+|||.+ ...|++|++|
T Consensus 67 ~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~--gv~~~vFSStAavYG~p---------~~~PI~E~~~ 135 (329)
T COG1087 67 KIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT--GVKKFIFSSTAAVYGEP---------TTSPISETSP 135 (329)
T ss_pred CCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh--CCCEEEEecchhhcCCC---------CCcccCCCCC
Confidence 68999999983 23488999999999999999999998 79999999999999986 4789999999
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC-------CcchhHHHHHHHHHHHhHhCCceeec
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-------SMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-------~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
..|. | .+|+..|++++.+++ ..+ |.+++||.+||-|.-+. +.-+..+++.+-.++. ....+.++
T Consensus 136 ~~p~NPYG~sKlm~E~iL~d~~~-a~~---~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G--~r~~l~if 209 (329)
T COG1087 136 LAPINPYGRSKLMSEEILRDAAK-ANP---FKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALG--KRDKLFIF 209 (329)
T ss_pred CCCCCcchhHHHHHHHHHHHHHH-hCC---CcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhc--CCceeEEe
Confidence 8877 6 567777888888777 477 99999999999998431 1112333332322322 22336666
Q ss_pred CCcccc---ccceeccCHHHHHHHHHHHhcCCCCCC--cceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHH
Q 045430 157 GSKDCW---EGYSVASDADLIAEQHIWAAVDPYARN--EAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEE 231 (309)
Q Consensus 157 G~~~~~---~~~~~~~~vd~la~a~i~aa~~~~a~g--~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~ 231 (309)
|+.-.. ...||.++|.|||+|+++|+..=...| ++||+++|..+|..|+++.+.+..|.+.+.-
T Consensus 210 G~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~----------- 278 (329)
T COG1087 210 GDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVE----------- 278 (329)
T ss_pred CCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCcee-----------
Confidence 743311 268999999999999999986411133 6999999999999999999999999664321
Q ss_pred HHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcC-ChHHHHHHHHHHHH
Q 045430 232 IMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFR-NSKNSFVNWIDKMK 303 (309)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~-~~~~gl~~t~~~~r 303 (309)
..+ +++++.. ..+.|.+|||+ |||+|++ ++++-++.+++|.+
T Consensus 279 ~~~--------------RR~GDpa----------------~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~ 322 (329)
T COG1087 279 IAP--------------RRAGDPA----------------ILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQ 322 (329)
T ss_pred eCC--------------CCCCCCc----------------eeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhh
Confidence 122 1133332 34789999987 7999999 99999999999997
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=244.58 Aligned_cols=241 Identities=13% Similarity=0.056 Sum_probs=186.1
Q ss_pred CCCCccEEEEeecc-cCC----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWA-SRP----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 9 ~~~~vd~V~H~A~~-~~~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
..+.+|+|+|.|+. +.+ ++-++...|+.+|.+|||+++..+ +++||||+||.+|||.+.+ ..-..|
T Consensus 77 ~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~~--------~~~~~E 147 (331)
T KOG0747|consen 77 ETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSDE--------DAVVGE 147 (331)
T ss_pred ccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCccc--------cccccc
Confidence 44589999999983 333 778899999999999999999875 8999999999999998621 222348
Q ss_pred CCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcc
Q 045430 84 DLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKD 160 (309)
Q Consensus 84 ~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~ 160 (309)
.++++|. | .+|.++|.+++.+-.+ ++ +|++++|-.+||||++-.. ..+.-|..+.. .+.+.++.|+|.
T Consensus 148 ~s~~nPtnpyAasKaAaE~~v~Sy~~s-y~---lpvv~~R~nnVYGP~q~~~----klipkFi~l~~-~~~~~~i~g~g~ 218 (331)
T KOG0747|consen 148 ASLLNPTNPYAASKAAAEMLVRSYGRS-YG---LPVVTTRMNNVYGPNQYPE----KLIPKFIKLAM-RGKEYPIHGDGL 218 (331)
T ss_pred cccCCCCCchHHHHHHHHHHHHHHhhc-cC---CcEEEEeccCccCCCcChH----HHhHHHHHHHH-hCCCcceecCcc
Confidence 8888776 5 4566677777777774 88 9999999999999997321 11233434432 477889999998
Q ss_pred ccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHH
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
++|++.||+|+++|+..++.. +..||+|||++..+.+..||.+.|.+.++...+..+ ..|.. .++.++
T Consensus 219 ---~~rs~l~veD~~ea~~~v~~K-g~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~--~~p~~--~~v~dR---- 286 (331)
T KOG0747|consen 219 ---QTRSYLYVEDVSEAFKAVLEK-GELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNID--TEPFI--FFVEDR---- 286 (331)
T ss_pred ---cceeeEeHHHHHHHHHHHHhc-CCccceeeccCcchhhHHHHHHHHHHHHHHhccCCC--CCCcc--eecCCC----
Confidence 889999999999997766655 567999999999999999999999999997655431 11111 233322
Q ss_pred HHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHC
Q 045430 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+... .+..+|.+|+++|||.|+++.++||+.|++||.++
T Consensus 287 ------------p~nd--------------~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~ 325 (331)
T KOG0747|consen 287 ------------PYND--------------LRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN 325 (331)
T ss_pred ------------Cccc--------------ccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence 2221 13468999999999999999999999999999874
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=258.34 Aligned_cols=231 Identities=13% Similarity=0.067 Sum_probs=170.0
Q ss_pred CCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
+.++|+|||||+... .++.+++++|+.||.||+++|++. +. ||||+||..|||.+ ...|.+|+
T Consensus 182 ~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~--g~-r~V~~SS~~VYg~~---------~~~p~~E~ 249 (436)
T PLN02166 182 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV--GA-RFLLTSTSEVYGDP---------LEHPQKET 249 (436)
T ss_pred ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh--CC-EEEEECcHHHhCCC---------CCCCCCcc
Confidence 468999999998432 266789999999999999999987 44 89999999999964 24578887
Q ss_pred C-----CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 85 L-----PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 85 ~-----p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
. |..|. + .+|+.+|+++.++..+ .+ ++++++||++||||++......+... +...+ ..+.++.+.
T Consensus 250 ~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~-~~---l~~~ilR~~~vYGp~~~~~~~~~i~~-~i~~~--l~~~~i~v~ 322 (436)
T PLN02166 250 YWGNVNPIGERSCYDEGKRTAETLAMDYHRG-AG---VEVRIARIFNTYGPRMCLDDGRVVSN-FVAQT--IRKQPMTVY 322 (436)
T ss_pred ccccCCCCCCCCchHHHHHHHHHHHHHHHHH-hC---CCeEEEEEccccCCCCCCCccchHHH-HHHHH--hcCCCcEEe
Confidence 4 33322 1 3456677777777663 67 99999999999999863111111111 11122 236677888
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++. +.+|++||+|++++++.++..+ .+++|||++++.+|+.|+.+.|++.+|.+.... +....
T Consensus 323 g~g~---~~rdfi~V~Dva~ai~~~~~~~--~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~-----------~~p~~ 386 (436)
T PLN02166 323 GDGK---QTRSFQYVSDLVDGLVALMEGE--HVGPFNLGNPGEFTMLELAEVVKETIDSSATIE-----------FKPNT 386 (436)
T ss_pred CCCC---eEEeeEEHHHHHHHHHHHHhcC--CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCee-----------eCCCC
Confidence 9887 6799999999999998888643 346999999999999999999999998643210 11100
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.+.. ....+|++|+++ +||+|++++++|++++++|+++.
T Consensus 387 --------------~~~~----------------~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~ 426 (436)
T PLN02166 387 --------------ADDP----------------HKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNR 426 (436)
T ss_pred --------------CCCc----------------cccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 0110 134689999998 69999999999999999999863
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-31 Score=248.13 Aligned_cols=245 Identities=13% Similarity=0.017 Sum_probs=173.9
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcC-------CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPN-------APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~-------~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
++|+|||+|+... .++.+++++|+.||.|++++|.+. .++++|||++||.++||.. . . ...
T Consensus 74 ~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~--~-~----~~~ 146 (355)
T PRK10217 74 QPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDL--H-S----TDD 146 (355)
T ss_pred CCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCC--C-C----CCC
Confidence 5899999998422 255779999999999999999752 1357899999999999953 1 0 245
Q ss_pred CCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
|++|+.+..|. + .+|+..|.++..++.+ .+ ++++++||++||||++... ......+ ... ..|.+++++
T Consensus 147 ~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~-~~---~~~~i~r~~~v~Gp~~~~~--~~~~~~~-~~~--~~~~~~~~~ 217 (355)
T PRK10217 147 FFTETTPYAPSSPYSASKASSDHLVRAWLRT-YG---LPTLITNCSNNYGPYHFPE--KLIPLMI-LNA--LAGKPLPVY 217 (355)
T ss_pred CcCCCCCCCCCChhHHHHHHHHHHHHHHHHH-hC---CCeEEEeeeeeeCCCCCcc--cHHHHHH-HHH--hcCCCceEe
Confidence 79999876554 2 3455667777776654 67 9999999999999987311 1111111 111 236677888
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|+++ +.+|++||+|+|++++.++..+ ..|++|||++++++|+.|+.+.+++.+|...+. .|.++... ...
T Consensus 218 g~g~---~~~~~i~v~D~a~a~~~~~~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~-----~~~~~~~~-~~~ 287 (355)
T PRK10217 218 GNGQ---QIRDWLYVEDHARALYCVATTG-KVGETYNIGGHNERKNLDVVETICELLEELAPN-----KPQGVAHY-RDL 287 (355)
T ss_pred CCCC---eeeCcCcHHHHHHHHHHHHhcC-CCCCeEEeCCCCcccHHHHHHHHHHHhcccccc-----cccccccc-ccc
Confidence 8888 6799999999999998888654 457999999999999999999999999964321 11111100 000
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+ ......+.. .....+|++|+++ +||+|+++++||++++++||++.
T Consensus 288 ------~-~~~~~~~~~----------------~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~ 334 (355)
T PRK10217 288 ------I-TFVADRPGH----------------DLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN 334 (355)
T ss_pred ------c-eecCCCCCC----------------CcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhC
Confidence 0 000000111 0134689999986 79999999999999999999764
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=254.30 Aligned_cols=244 Identities=14% Similarity=0.062 Sum_probs=165.0
Q ss_pred HHhccCCCCccEEEEeeccc-CC----Ch---HHHHHhHHHHHHHHHHHhCcCCCCCc-eEEEEeCCccccCCccccCCC
Q 045430 4 QAKLSKLTDVTHIFYVTWAS-RP----TE---AENCEVNGAMLRNVLRSVIPNAPNLR-HVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~-~~----~~---~~~~~vNv~gt~nll~a~~~~~~~v~-r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
.+.+.+. ++|+|||+|+.. .. ++ ...+++|+.||.|++++|++. +++ |||++||.++||......
T Consensus 129 ~~~l~~~-~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~--gv~~~~V~~SS~~vYG~~~~~~--- 202 (442)
T PLN02572 129 SEAFKSF-EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF--APDCHLVKLGTMGEYGTPNIDI--- 202 (442)
T ss_pred HHHHHhC-CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh--CCCccEEEEecceecCCCCCCC---
Confidence 3344443 589999999732 11 22 345789999999999999987 575 999999999999630000
Q ss_pred CCCCCCCC------CCC---CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc----------
Q 045430 75 RPHDTPFT------EDL---PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM---------- 132 (309)
Q Consensus 75 ~~~~~p~~------E~~---p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~---------- 132 (309)
...+++ |++ |..|. + .+|+..|.++..++.. .+ ++++++||++||||++...
T Consensus 203 --~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~-~g---l~~v~lR~~~vyGp~~~~~~~~~~li~~~ 276 (442)
T PLN02572 203 --EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA-WG---IRATDLNQGVVYGVRTDETMMDEELINRL 276 (442)
T ss_pred --cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh-cC---CCEEEEecccccCCCCccccccccccccc
Confidence 011121 333 22222 2 3455566666666653 68 9999999999999986321
Q ss_pred -----chhHHHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCC--cceeecCCCcccHHHH
Q 045430 133 -----MNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARN--EAFNCSNGDVFKWKHL 205 (309)
Q Consensus 133 -----~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g--~~fNI~~g~~~s~~el 205 (309)
+..+ +..+.. ....|.++.+.|+|. +.||++||+|+|++++.++..+...| ++|||++ +.+|+.|+
T Consensus 277 ~~~~~~~~~--i~~~~~-~~~~g~~i~v~g~G~---~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el 349 (442)
T PLN02572 277 DYDGVFGTA--LNRFCV-QAAVGHPLTVYGKGG---QTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNEL 349 (442)
T ss_pred CcccchhhH--HHHHHH-HHhcCCCceecCCCC---EEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHH
Confidence 0111 111111 112377888889888 77999999999999999887543445 5899986 67999999
Q ss_pred HHHHHHH---hccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh
Q 045430 206 WKVLAEQ---FEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE 282 (309)
Q Consensus 206 ~~~i~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~ 282 (309)
.+.|++. +|.+.... ..|.+ ..... .....+|++|+++
T Consensus 350 ~~~i~~~~~~~g~~~~~~---~~p~~----------------------~~~~~--------------~~~~~~d~~k~~~ 390 (442)
T PLN02572 350 AKLVTKAGEKLGLDVEVI---SVPNP----------------------RVEAE--------------EHYYNAKHTKLCE 390 (442)
T ss_pred HHHHHHHHHhhCCCCCee---eCCCC----------------------ccccc--------------ccccCccHHHHHH
Confidence 9999999 88553210 01100 00000 0134679999999
Q ss_pred cCCCCcC---ChHHHHHHHHHHHHHC
Q 045430 283 HGFLGFR---NSKNSFVNWIDKMKTY 305 (309)
Q Consensus 283 lGf~p~~---~~~~gl~~t~~~~r~~ 305 (309)
+||.|++ ++++|+.+|++|||+.
T Consensus 391 LGw~p~~~~~~l~~~l~~~~~~~~~~ 416 (442)
T PLN02572 391 LGLEPHLLSDSLLDSLLNFAVKYKDR 416 (442)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence 9999999 9999999999999863
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=253.11 Aligned_cols=230 Identities=15% Similarity=0.062 Sum_probs=167.1
Q ss_pred CCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
+.++|+|||+|+... .++.+++++|+.||.||+++|++. ++ ||||+||..|||.. ...|.+|+
T Consensus 181 l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~--g~-r~V~~SS~~VYg~~---------~~~p~~E~ 248 (442)
T PLN02206 181 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV--GA-RFLLTSTSEVYGDP---------LQHPQVET 248 (442)
T ss_pred hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh--CC-EEEEECChHHhCCC---------CCCCCCcc
Confidence 357899999998432 267789999999999999999987 55 89999999999864 24567787
Q ss_pred CC--CCCc-c-----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 85 LP--RLNV-T-----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 85 ~p--~~p~-p-----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.. ..|. + .+|+..|+++.++..+ .+ ++++++||++||||+.......+....+... ..+.++.++
T Consensus 249 ~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~-~g---~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~---l~~~~i~i~ 321 (442)
T PLN02206 249 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG-AN---VEVRIARIFNTYGPRMCIDDGRVVSNFVAQA---LRKEPLTVY 321 (442)
T ss_pred ccccCCCCCccchHHHHHHHHHHHHHHHHHH-hC---CCeEEEEeccccCCCCCccccchHHHHHHHH---HcCCCcEEe
Confidence 42 1222 2 2355566666666553 67 9999999999999985311111111111111 236677888
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++. +.+|++||+|+|+++++++..+ .+.+|||++++.+|+.|+.+.|++.+|.+.... +....
T Consensus 322 g~G~---~~rdfi~V~Dva~ai~~a~e~~--~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~-----------~~p~~ 385 (442)
T PLN02206 322 GDGK---QTRSFQFVSDLVEGLMRLMEGE--HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIE-----------FRPNT 385 (442)
T ss_pred CCCC---EEEeEEeHHHHHHHHHHHHhcC--CCceEEEcCCCceeHHHHHHHHHHHhCCCCcee-----------eCCCC
Confidence 8887 6799999999999999888654 345999999999999999999999998432210 00000
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.... ....+|++|+++ +||+|+++++||++++++||++
T Consensus 386 --------------~~~~----------------~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~ 424 (442)
T PLN02206 386 --------------EDDP----------------HKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQ 424 (442)
T ss_pred --------------CCCc----------------cccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence 0010 134689999987 6999999999999999999986
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=242.97 Aligned_cols=235 Identities=13% Similarity=0.073 Sum_probs=165.1
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCC-ccccCCccccCCCCCCCCCCCCCCCC-
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGG-KHYVGPFESFGKIRPHDTPFTEDLPR- 87 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~-~vYG~~~~~~~~~~~~~~p~~E~~p~- 87 (309)
++++|+|||+|+....++.+.+++|+.||.|++++|+++ +++||||+||. ++||.+. . ....+++|+++.
T Consensus 79 ~~~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~--~v~r~V~~SS~~avyg~~~---~---~~~~~~~E~~~~~ 150 (342)
T PLN02214 79 IDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEA--KVKRVVITSSIGAVYMDPN---R---DPEAVVDESCWSD 150 (342)
T ss_pred HhcCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeccceeeeccCC---C---CCCcccCcccCCC
Confidence 346899999999655677889999999999999999986 68999999996 6898531 0 012358888631
Q ss_pred -----CCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 88 -----LNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 88 -----~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
.|. + .+|+..|+++.++..+ .+ ++++++||++||||++........ ..++.. ..|.... .|+
T Consensus 151 ~~~~~~p~~~Y~~sK~~aE~~~~~~~~~-~g---~~~v~lRp~~vyGp~~~~~~~~~~-~~~~~~---~~g~~~~-~~~- 220 (342)
T PLN02214 151 LDFCKNTKNWYCYGKMVAEQAAWETAKE-KG---VDLVVLNPVLVLGPPLQPTINASL-YHVLKY---LTGSAKT-YAN- 220 (342)
T ss_pred hhhccccccHHHHHHHHHHHHHHHHHHH-cC---CcEEEEeCCceECCCCCCCCCchH-HHHHHH---HcCCccc-CCC-
Confidence 121 1 2345566666666553 57 999999999999998742211111 111111 1233332 343
Q ss_pred cccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHH
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGV 239 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
+.+|++||+|+|+++++|+.++.+ ++.|||++ ..+|++|+.+.|++.++.. . .|... ..
T Consensus 221 ----~~~~~i~V~Dva~a~~~al~~~~~-~g~yn~~~-~~~~~~el~~~i~~~~~~~-~------~~~~~---~~----- 279 (342)
T PLN02214 221 ----LTQAYVDVRDVALAHVLVYEAPSA-SGRYLLAE-SARHRGEVVEILAKLFPEY-P------LPTKC---KD----- 279 (342)
T ss_pred ----CCcCeeEHHHHHHHHHHHHhCccc-CCcEEEec-CCCCHHHHHHHHHHHCCCC-C------CCCCC---cc-----
Confidence 458999999999999999987644 56899997 4789999999999998521 1 11110 00
Q ss_pred HHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCCC
Q 045430 240 WEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309 (309)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~iP 309 (309)
..++.. ....+|++|+++|||+| .+++||+++|++||++.|++|
T Consensus 280 ---------~~~~~~----------------~~~~~d~~k~~~LG~~p-~~lee~i~~~~~~~~~~~~~~ 323 (342)
T PLN02214 280 ---------EKNPRA----------------KPYKFTNQKIKDLGLEF-TSTKQSLYDTVKSLQEKGHLA 323 (342)
T ss_pred ---------ccCCCC----------------CccccCcHHHHHcCCcc-cCHHHHHHHHHHHHHHcCCCC
Confidence 001111 12358999999899999 599999999999999999986
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=238.70 Aligned_cols=238 Identities=14% Similarity=0.082 Sum_probs=170.2
Q ss_pred HHhccCCCCccEEEEeecc-c-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 4 QAKLSKLTDVTHIFYVTWA-S-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~-~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.+.+.. .++|+|||+|+. . ..++.+++++|+.+|.|++++|++. +++||||+||..|||.. .
T Consensus 42 ~~~~~~-~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~SS~~vyg~~---------~ 109 (306)
T PLN02725 42 EAFFAK-EKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH--GVKKLLFLGSSCIYPKF---------A 109 (306)
T ss_pred HHHHhc-cCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc--CCCeEEEeCceeecCCC---------C
Confidence 334444 358999999973 2 1256779999999999999999987 68999999999999953 2
Q ss_pred CCCCCCCCCCC-Cc-c-cchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCC------CcchhHHHHHHHH
Q 045430 78 DTPFTEDLPRL-NV-T-NFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY------SMMNVVGTLCVYA 143 (309)
Q Consensus 78 ~~p~~E~~p~~-p~-p-~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~------~~~~~~~~~~i~~ 143 (309)
..|++|+++.. |. | ...|+ .|+++.++... .+ ++++++||++||||++. ...+.+ +..+.
T Consensus 110 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~~R~~~vyG~~~~~~~~~~~~~~~~--i~~~~ 183 (306)
T PLN02725 110 PQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQ-YG---WDAISGMPTNLYGPHDNFHPENSHVIPAL--IRRFH 183 (306)
T ss_pred CCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHH-hC---CCEEEEEecceeCCCCCCCCCCCcccHHH--HHHHH
Confidence 56899987332 11 3 22355 45555555443 57 99999999999999753 112111 11111
Q ss_pred HHHhHhCCceee-cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCC
Q 045430 144 AICKHEGVPLLF-PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQ 222 (309)
Q Consensus 144 ~l~~~~g~~~~~-~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~ 222 (309)
. ++..|.++.+ +|++. +.++++|++|+++++++++..+ ..++.|||++++.+|+.|+++.|++.+|.+....
T Consensus 184 ~-~~~~~~~~~~~~~~g~---~~~~~i~v~Dv~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~-- 256 (306)
T PLN02725 184 E-AKANGAPEVVVWGSGS---PLREFLHVDDLADAVVFLMRRY-SGAEHVNVGSGDEVTIKELAELVKEVVGFEGELV-- 256 (306)
T ss_pred H-HhhcCCCeEEEcCCCC---eeeccccHHHHHHHHHHHHhcc-ccCcceEeCCCCcccHHHHHHHHHHHhCCCCcee--
Confidence 1 1224666665 78777 6789999999999999888754 3457899999999999999999999998643211
Q ss_pred CCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHH
Q 045430 223 DGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKM 302 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~ 302 (309)
+... .+... ....+|++|++++||+|+++++|+++++++|+
T Consensus 257 ---------~~~~--------------~~~~~----------------~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~ 297 (306)
T PLN02725 257 ---------WDTS--------------KPDGT----------------PRKLMDSSKLRSLGWDPKFSLKDGLQETYKWY 297 (306)
T ss_pred ---------ecCC--------------CCCcc----------------cccccCHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 0000 00000 13468999999899999999999999999999
Q ss_pred HHC
Q 045430 303 KTY 305 (309)
Q Consensus 303 r~~ 305 (309)
+++
T Consensus 298 ~~~ 300 (306)
T PLN02725 298 LEN 300 (306)
T ss_pred Hhh
Confidence 875
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=247.31 Aligned_cols=250 Identities=14% Similarity=0.115 Sum_probs=162.9
Q ss_pred CCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC---
Q 045430 10 LTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF--- 81 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~--- 81 (309)
++++|+|||+|+... .++.+.+..|+.||.|++++|++. + +||||+||..+||...... .....|+
T Consensus 84 ~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~--~-~r~v~~SS~~vYg~~~~~~---~~e~~p~~~~ 157 (386)
T PLN02427 84 IKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN--N-KRLIHFSTCEVYGKTIGSF---LPKDHPLRQD 157 (386)
T ss_pred hhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc--C-CEEEEEeeeeeeCCCcCCC---CCcccccccc
Confidence 446899999998432 244566789999999999999875 4 8999999999999631000 0011222
Q ss_pred ------CCCCCCC---C--cccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCC---------cchhH
Q 045430 82 ------TEDLPRL---N--VTNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS---------MMNVV 136 (309)
Q Consensus 82 ------~E~~p~~---p--~p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~---------~~~~~ 136 (309)
+|+.+.. | .|.+.|+ .|.++.+++.+ .+ ++++|+||++||||++.. ..+.+
T Consensus 158 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g---~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~ 233 (386)
T PLN02427 158 PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-NG---LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 233 (386)
T ss_pred cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh-cC---CceEEecccceeCCCCCccccccccccccchH
Confidence 2322111 1 1222345 55555555443 57 999999999999997521 11112
Q ss_pred HHHHHH-HHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCC-CCCcceeecCC-CcccHHHHHHHHHHHh
Q 045430 137 GTLCVY-AAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY-ARNEAFNCSNG-DVFKWKHLWKVLAEQF 213 (309)
Q Consensus 137 ~~~~i~-~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~-a~g~~fNI~~g-~~~s~~el~~~i~~~~ 213 (309)
. ..+ ..+ ..+.++.+.|++. +.+|++||+|+|+++++++.++. ..|++|||+++ +.+|+.|+.+.|++.+
T Consensus 234 i--~~~~~~~--~~~~~~~~~g~g~---~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~ 306 (386)
T PLN02427 234 L--ACFSNNL--LRREPLKLVDGGQ---SQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVY 306 (386)
T ss_pred H--HHHHHHH--hcCCCeEEECCCC---ceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHh
Confidence 1 111 111 2367877788776 77999999999999999887653 46889999997 5899999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChH
Q 045430 214 EIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSK 292 (309)
Q Consensus 214 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~ 292 (309)
|.....+. ...... ...... ..... + .+ ...+.+|++|+|+ +||+|+++++
T Consensus 307 g~~~~~~~---~~~~~~-~~~~~~-----------~~~~~------~--~~-----~~~~~~d~~k~~~~lGw~p~~~l~ 358 (386)
T PLN02427 307 AKVSGEPA---LEEPTV-DVSSKE-----------FYGEG------Y--DD-----SDKRIPDMTIINKQLGWNPKTSLW 358 (386)
T ss_pred cccccccc---cccccc-ccCccc-----------ccCcc------c--cc-----hhhccCCHHHHHHhcCCCcCccHH
Confidence 95322110 000000 000000 00000 0 00 0144789999987 6999999999
Q ss_pred HHHHHHHHHHHH
Q 045430 293 NSFVNWIDKMKT 304 (309)
Q Consensus 293 ~gl~~t~~~~r~ 304 (309)
+|++++++|+++
T Consensus 359 ~gl~~~~~~~~~ 370 (386)
T PLN02427 359 DLLESTLTYQHK 370 (386)
T ss_pred HHHHHHHHHHHH
Confidence 999999999876
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=238.71 Aligned_cols=231 Identities=12% Similarity=0.115 Sum_probs=163.5
Q ss_pred CCccEEEEeeccc-CC--ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-RP--TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~--~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
.++|+|||+|+.. .. +.++++++|+.+|.|++++|++. ++ ||||+||..+||.. ...+.+|+.+.
T Consensus 67 ~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~-~~i~~SS~~vyg~~---------~~~~~~E~~~~ 134 (308)
T PRK11150 67 GDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGR---------TDDFIEEREYE 134 (308)
T ss_pred CCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc--CC-cEEEEcchHHhCcC---------CCCCCccCCCC
Confidence 4789999999842 22 45568999999999999999986 56 69999999999963 13468888776
Q ss_pred CCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC--cchhHHHHHHHHHHHhHhCCce-eecCCccc
Q 045430 88 LNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS--MMNVVGTLCVYAAICKHEGVPL-LFPGSKDC 161 (309)
Q Consensus 88 ~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~--~~~~~~~~~i~~~l~~~~g~~~-~~~G~~~~ 161 (309)
.|. + .+|+..|+++.++... .+ ++++++||++||||++.. .+..+.. .+...+. .|.++ .+.|++.
T Consensus 135 ~p~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~~lR~~~vyG~~~~~~~~~~~~~~-~~~~~~~--~~~~~~i~~g~~~- 206 (308)
T PRK11150 135 KPLNVYGYSKFLFDEYVRQILPE-AN---SQICGFRYFNVYGPREGHKGSMASVAF-HLNNQLN--NGENPKLFEGSEN- 206 (308)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH-cC---CCEEEEeeeeecCCCCCCCCccchhHH-HHHHHHh--cCCCCEEecCCCc-
Confidence 554 2 4456667777666553 57 999999999999998732 1221110 0111221 34443 3446655
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHH
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWE 241 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
..++++||+|+|+++++++.++ .+++|||++|+.+|+.|+++.|++.+|...... .+.+- .
T Consensus 207 --~~r~~i~v~D~a~a~~~~~~~~--~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~----~~~~~--~--------- 267 (308)
T PRK11150 207 --FKRDFVYVGDVAAVNLWFWENG--VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEY----IPFPD--K--------- 267 (308)
T ss_pred --eeeeeeeHHHHHHHHHHHHhcC--CCCeEEcCCCCceeHHHHHHHHHHHhCCCccee----ccCcc--c---------
Confidence 6799999999999999888653 357999999999999999999999998421100 11000 0
Q ss_pred HHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCc-CChHHHHHHHHHHHH
Q 045430 242 QIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGF-RNSKNSFVNWIDKMK 303 (309)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~-~~~~~gl~~t~~~~r 303 (309)
+. +.. ......|++|++++||+|+ .++++|++++++|+.
T Consensus 268 -------~~-~~~---------------~~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 268 -------LK-GRY---------------QAFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred -------cc-ccc---------------ceecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence 00 000 0123579999999999997 599999999999984
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=242.93 Aligned_cols=248 Identities=12% Similarity=0.123 Sum_probs=168.6
Q ss_pred CCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
++++|+|||+|+... .++...+++|+.||.|++++|++. + +||||+||+.+||.. ...|++|+
T Consensus 66 ~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~--~-~~~v~~SS~~vyg~~---------~~~~~~ee 133 (347)
T PRK11908 66 VKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY--G-KHLVFPSTSEVYGMC---------PDEEFDPE 133 (347)
T ss_pred HcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc--C-CeEEEEecceeeccC---------CCcCcCcc
Confidence 457899999998532 256778899999999999999986 5 799999999999953 13467776
Q ss_pred CCCC---C--cccchHHH-----HHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc------hhHHHHHHHHHHHhH
Q 045430 85 LPRL---N--VTNFYYTQ-----EDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM------NVVGTLCVYAAICKH 148 (309)
Q Consensus 85 ~p~~---p--~p~~~y~~-----e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~------~~~~~~~i~~~l~~~ 148 (309)
.+.. | .|.+.|+. |.++..++.+ .+ ++++++||++||||++.+.. ..+. ..++..+ .
T Consensus 134 ~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i-~~~~~~~--~ 206 (347)
T PRK11908 134 ASPLVYGPINKPRWIYACSKQLMDRVIWAYGME-EG---LNFTLFRPFNWIGPGLDSIYTPKEGSSRVV-TQFLGHI--V 206 (347)
T ss_pred ccccccCcCCCccchHHHHHHHHHHHHHHHHHH-cC---CCeEEEeeeeeeCCCccCCCccccCCcchH-HHHHHHH--h
Confidence 5321 1 13334554 4455555543 67 99999999999999863211 1111 1122222 2
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCC-CcccHHHHHHHHHHHhccccCCCCCCCC
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNG-DVFKWKHLWKVLAEQFEIENYGLPQDGE 225 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g-~~~s~~el~~~i~~~~G~~~~~~~~~~~ 225 (309)
.|.++.+.|++. +.++++||+|+|++++.++.++. +.|++|||+++ ..+|++|+.+.|++.+|...... ..
T Consensus 207 ~~~~~~~~~~g~---~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~---~~ 280 (347)
T PRK11908 207 RGEPISLVDGGS---QKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYA---ES 280 (347)
T ss_pred CCCceEEecCCc---eeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccccc---cc
Confidence 367777777776 77999999999999999887653 56899999987 57999999999999999542210 00
Q ss_pred CCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 226 RVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
+..+ .+.......+ ++..... ..++..|++|+++ +||+|+++++|+++++++|+++
T Consensus 281 ~~~~-~~~~~~~~~~------~~~~~~~----------------~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~ 337 (347)
T PRK11908 281 AKKV-KLVETTSGAY------YGKGYQD----------------VQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRG 337 (347)
T ss_pred cccc-ccccCCchhc------cCcCcch----------------hccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHH
Confidence 0000 0000000000 0000000 1144679999987 6999999999999999999976
Q ss_pred C
Q 045430 305 Y 305 (309)
Q Consensus 305 ~ 305 (309)
.
T Consensus 338 ~ 338 (347)
T PRK11908 338 H 338 (347)
T ss_pred H
Confidence 4
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=240.40 Aligned_cols=252 Identities=15% Similarity=0.042 Sum_probs=170.3
Q ss_pred HhccCCCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCC---ceEEEEeCCccccCCccccCCCCC
Q 045430 5 AKLSKLTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNL---RHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 5 ~~~~~~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v---~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
+.+.++ ++|+|||+|+... .++....++|+.||.|++++|++. ++ +||||+||..+||..
T Consensus 72 ~~~~~~-~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~--~~~~~~~~v~~SS~~vyg~~--------- 139 (343)
T TIGR01472 72 RIIDEI-KPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL--GLIKSVKFYQASTSELYGKV--------- 139 (343)
T ss_pred HHHHhC-CCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh--CCCcCeeEEEeccHHhhCCC---------
Confidence 334433 4799999998422 144567789999999999999886 44 489999999999964
Q ss_pred CCCCCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCCc
Q 045430 77 HDTPFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~~ 152 (309)
...|.+|+.|..|. + .+|+..|.+++.++.+ .+ +++++.|+.++|||+.+. ....... .....+. .|.+
T Consensus 140 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~~~~~~~~gp~~~~~~~~~~~~-~~~~~~~--~~~~ 212 (343)
T TIGR01472 140 QEIPQNETTPFYPRSPYAAAKLYAHWITVNYREA-YG---LFAVNGILFNHESPRRGENFVTRKIT-RAAAKIK--LGLQ 212 (343)
T ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-hC---CceEEEeecccCCCCCCccccchHHH-HHHHHHH--cCCC
Confidence 24578999887655 2 4466677777666653 57 999999999999997542 2221111 1111221 2443
Q ss_pred -eeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCC--C--CCCCC
Q 045430 153 -LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLP--Q--DGERV 227 (309)
Q Consensus 153 -~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~--~--~~~~~ 227 (309)
..+.|++. +.+|++||+|+|+++++++.++. +++|||++|+++|+.|+.+.+++.+|.+...-. . ...|.
T Consensus 213 ~~~~~g~g~---~~rd~i~V~D~a~a~~~~~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~ 287 (343)
T TIGR01472 213 EKLYLGNLD---AKRDWGHAKDYVEAMWLMLQQDK--PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCK 287 (343)
T ss_pred CceeeCCCc---cccCceeHHHHHHHHHHHHhcCC--CccEEecCCCceeHHHHHHHHHHHcCCCccccccccccccccc
Confidence 34568887 77999999999999998887643 468999999999999999999999996432100 0 00000
Q ss_pred CHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 228 RLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.......... +...+++.+ ....+|++|+++ +||+|+++++|||+++++++++
T Consensus 288 ~~~~~~~~~~--------~~~~~~~~~----------------~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 288 ETGKVHVEID--------PRYFRPTEV----------------DLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred ccCceeEEeC--------ccccCCCcc----------------chhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 0000000000 000001111 123679999987 6999999999999999999875
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=260.45 Aligned_cols=248 Identities=14% Similarity=0.102 Sum_probs=172.7
Q ss_pred CCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
++++|+|||+|+... .++.+++++|+.||.|+++||+++ + +||||+||..+||.. ...|++|+
T Consensus 380 l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~--~-~~~V~~SS~~vyg~~---------~~~~~~E~ 447 (660)
T PRK08125 380 IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY--N-KRIIFPSTSEVYGMC---------TDKYFDED 447 (660)
T ss_pred hcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc--C-CeEEEEcchhhcCCC---------CCCCcCcc
Confidence 457899999998432 256678899999999999999986 5 899999999999953 24578998
Q ss_pred CCCC---Cc--ccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc------hhHHHHHHHHHHHhH
Q 045430 85 LPRL---NV--TNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM------NVVGTLCVYAAICKH 148 (309)
Q Consensus 85 ~p~~---p~--p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~------~~~~~~~i~~~l~~~ 148 (309)
++.. |. |.+.|+ .|.++..++.+ .+ ++++++||++||||++.+.. ..+....+... .
T Consensus 448 ~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~-~g---~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~---~ 520 (660)
T PRK08125 448 TSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK-EG---LRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNL---V 520 (660)
T ss_pred ccccccCCCCCCccchHHHHHHHHHHHHHHHHh-cC---CceEEEEEceeeCCCccccccccccccchHHHHHHHh---c
Confidence 7541 21 223355 55556555543 57 99999999999999864311 11121222221 2
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC-cccHHHHHHHHHHHhccccCCCCCCCC
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD-VFKWKHLWKVLAEQFEIENYGLPQDGE 225 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~-~~s~~el~~~i~~~~G~~~~~~~~~~~ 225 (309)
.|.++.+.|++. +.+|++||+|+|++++.++.++. +.|++|||++++ .+|++|+.+.|++.+|.+.... ..
T Consensus 521 ~~~~i~~~g~g~---~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~---~~ 594 (660)
T PRK08125 521 EGSPIKLVDGGK---QKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRD---HF 594 (660)
T ss_pred CCCCeEEeCCCc---eeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccc---cC
Confidence 366777888887 77999999999999988887642 458999999986 7999999999999999542211 01
Q ss_pred CCCHHHHHhccH-HHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHH
Q 045430 226 RVRLEEIMRGKE-GVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMK 303 (309)
Q Consensus 226 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r 303 (309)
|... ...... ..+ .+..... .....+|++|+|+ +||+|+++++|+++++++||+
T Consensus 595 ~~~~--~~~~~~~~~~------~~~~~~~----------------~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~ 650 (660)
T PRK08125 595 PPFA--GFRVVESSSY------YGKGYQD----------------VEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFL 650 (660)
T ss_pred Cccc--cccccccccc------ccccccc----------------ccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 1100 000000 000 0000000 1134689999997 699999999999999999999
Q ss_pred HCC
Q 045430 304 TYR 306 (309)
Q Consensus 304 ~~~ 306 (309)
+..
T Consensus 651 ~~~ 653 (660)
T PRK08125 651 RTV 653 (660)
T ss_pred hcc
Confidence 864
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=237.50 Aligned_cols=254 Identities=12% Similarity=-0.021 Sum_probs=174.7
Q ss_pred HHhccCCCCccEEEEeeccc-C----CChHHHHHhHHHHHHHHHHHhCcC-------CCCCceEEEEeCCccccCCcccc
Q 045430 4 QAKLSKLTDVTHIFYVTWAS-R----PTEAENCEVNGAMLRNVLRSVIPN-------APNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~-~----~~~~~~~~vNv~gt~nll~a~~~~-------~~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
++.+++ .++|+|||+|+.. . .+++++.++|+.||.|++++|++. ..+++||||+||..+||... ..
T Consensus 66 ~~~~~~-~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~-~~ 143 (352)
T PRK10084 66 DRIFAQ-HQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLP-HP 143 (352)
T ss_pred HHHHHh-cCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCC-cc
Confidence 344443 2689999999843 1 146779999999999999999763 12478999999999998531 00
Q ss_pred CCC--CCCCCCCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHH
Q 045430 72 GKI--RPHDTPFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAIC 146 (309)
Q Consensus 72 ~~~--~~~~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~ 146 (309)
.+. .....+++|+.+..|. + .+|+..|.+++.++.. .+ ++++++||++||||++... . .... +...+
T Consensus 144 ~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~g---~~~vilr~~~v~Gp~~~~~-~-~~~~-~~~~~- 215 (352)
T PRK10084 144 DEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRT-YG---LPTIVTNCSNNYGPYHFPE-K-LIPL-VILNA- 215 (352)
T ss_pred ccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHH-hC---CCEEEEeccceeCCCcCcc-c-hHHH-HHHHH-
Confidence 000 0001247898877654 2 4456667777666653 67 9999999999999986321 1 1111 11121
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCC
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGER 226 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~ 226 (309)
..+.++++.|++. +.+|++||+|+|+++++++..+ ..|++|||++++++|+.|+.+.+++.+|...+.. .+
T Consensus 216 -~~~~~~~~~~~g~---~~~~~v~v~D~a~a~~~~l~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~----~~ 286 (352)
T PRK10084 216 -LEGKPLPIYGKGD---QIRDWLYVEDHARALYKVVTEG-KAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKA----TS 286 (352)
T ss_pred -hcCCCeEEeCCCC---eEEeeEEHHHHHHHHHHHHhcC-CCCceEEeCCCCcCcHHHHHHHHHHHhccccccc----cc
Confidence 2366777888887 6799999999999998887653 4589999999999999999999999999542211 11
Q ss_pred CCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 227 VRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.. ..+. ...-.+... ....+|++|+++ +||+|++++++|++++++|+++.
T Consensus 287 ~~--~~~~-----------~~~~~~~~~----------------~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 337 (352)
T PRK10084 287 YR--EQIT-----------YVADRPGHD----------------RRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN 337 (352)
T ss_pred hh--hhcc-----------ccccCCCCC----------------ceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence 10 0000 000001110 134689999987 79999999999999999999874
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=237.88 Aligned_cols=239 Identities=10% Similarity=-0.019 Sum_probs=170.1
Q ss_pred HHhccCCCCccEEEEeeccc-C----CChHHHHHhHHHHHHHHHHHhCcCCCCCc-----eEEEEeCCccccCCccccCC
Q 045430 4 QAKLSKLTDVTHIFYVTWAS-R----PTEAENCEVNGAMLRNVLRSVIPNAPNLR-----HVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~-~----~~~~~~~~vNv~gt~nll~a~~~~~~~v~-----r~v~~Ss~~vYG~~~~~~~~ 73 (309)
.+.+..+ ++|+|||+|+.. . .++...+++|+.||.|++++|++. +++ |||++||.++||..
T Consensus 76 ~~~~~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~--~~~~~~~~~~v~~Ss~~vyg~~------ 146 (340)
T PLN02653 76 RRWLDDI-KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH--GQETGRQIKYYQAGSSEMYGST------ 146 (340)
T ss_pred HHHHHHc-CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh--ccccccceeEEEeccHHHhCCC------
Confidence 3344443 479999999842 2 245567799999999999999876 454 89999999999963
Q ss_pred CCCCCCCCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHh
Q 045430 74 IRPHDTPFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~ 149 (309)
..|++|+.|..|. + .+|...|.++..++.+ .+ +.++..|+.++|||+... .+...... ....+ ..
T Consensus 147 ----~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~~~~~~~~gp~~~~~~~~~~~~~-~~~~~--~~ 215 (340)
T PLN02653 147 ----PPPQSETTPFHPRSPYAVAKVAAHWYTVNYREA-YG---LFACNGILFNHESPRRGENFVTRKITR-AVGRI--KV 215 (340)
T ss_pred ----CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-cC---CeEEEeeeccccCCCCCcccchhHHHH-HHHHH--Hc
Confidence 2389999987765 2 4456667777666553 67 889999999999997643 32221111 11122 13
Q ss_pred CCcee-ecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCC
Q 045430 150 GVPLL-FPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVR 228 (309)
Q Consensus 150 g~~~~-~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~ 228 (309)
|.+++ +.|++. +.+|++||+|+|+++++++.++ .+++|||++|+++|+.|+.+.+++.+|.+.... ..+.
T Consensus 216 ~~~~~~~~g~g~---~~rd~i~v~D~a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~----~~~~ 286 (340)
T PLN02653 216 GLQKKLFLGNLD---ASRDWGFAGDYVEAMWLMLQQE--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDH----VEID 286 (340)
T ss_pred CCCCceEeCCCc---ceecceeHHHHHHHHHHHHhcC--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcc----eeeC
Confidence 44443 458877 7799999999999999888764 257899999999999999999999999642111 0000
Q ss_pred HHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 229 LEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.. ...+..+ ....+|++|+++ +||+|+++++|||+++++|+++
T Consensus 287 -----~~------------~~~~~~~----------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~ 330 (340)
T PLN02653 287 -----PR------------YFRPAEV----------------DNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLE 330 (340)
T ss_pred -----cc------------cCCcccc----------------ccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 00 0011111 123579999987 6999999999999999999875
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=236.81 Aligned_cols=265 Identities=14% Similarity=0.067 Sum_probs=185.4
Q ss_pred cCCCCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~ 82 (309)
.+++++ .|+|||+...+ +.+..+++||.||+|++++|.+. +++|+||+||..|++... .-..-+
T Consensus 72 ~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~--~v~~lIYtSs~~Vvf~g~--------~~~n~~ 140 (361)
T KOG1430|consen 72 NAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL--GVKRLIYTSSAYVVFGGE--------PIINGD 140 (361)
T ss_pred hhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh--CCCEEEEecCceEEeCCe--------ecccCC
Confidence 366788 88888874322 57789999999999999999998 799999999999997531 113456
Q ss_pred CCCCCCCcccchHHHHHHHHHHHHh-cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccc
Q 045430 83 EDLPRLNVTNFYYTQEDILFEEVEK-RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDC 161 (309)
Q Consensus 83 E~~p~~p~p~~~y~~e~~~~~~~~~-~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~ 161 (309)
|+.|........|..+|..+|.... ..+++.+..|+|||..|||||+....+.+.. +.+ .|..+-..|+++
T Consensus 141 E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~------~~~-~g~~~f~~g~~~- 212 (361)
T KOG1430|consen 141 ESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVE------ALK-NGGFLFKIGDGE- 212 (361)
T ss_pred CCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHH------HHH-ccCceEEeeccc-
Confidence 6665432222235544444443321 1112239999999999999999766544331 222 355554567776
Q ss_pred cccceeccCHHHHHHHHHHHhc-----CCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 162 WEGYSVASDADLIAEQHIWAAV-----DPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~-----~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
+..|++|++|++.|+++|+. .+...||+|+|+|++++..-++|..|...||...+.. ...|.++..+++..
T Consensus 213 --~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~--~~~p~~l~~~~~~l 288 (361)
T KOG1430|consen 213 --NLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSS--IKLPLFLSYFLAYL 288 (361)
T ss_pred --cccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCce--eecchHHHHHHHHH
Confidence 56899999999999999874 2457799999999999888888889999999876521 24777777777654
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.+. ..+.++...+.+++. -++ ++ ....++|++||++ +||.|.+++++++.+++.|++..
T Consensus 289 ~e~---~~~~l~p~~p~lt~~----~v~-~~--~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~ 348 (361)
T KOG1430|consen 289 LEI---VYFLLRPYQPILTRF----RVA-LL--GVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASE 348 (361)
T ss_pred HHH---HHHhccCCCCCcChh----hee-ee--ccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence 332 223333123444431 111 11 2367999999986 79999999999999999998764
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=257.89 Aligned_cols=237 Identities=12% Similarity=0.046 Sum_probs=175.9
Q ss_pred CCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
.++|+|||+|+... .++.+++++|+.||.|++++|++.+ .++||||+||..+||.... . ...+.+|++
T Consensus 79 ~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~~vyg~~~~--~----~~~~~~E~~ 151 (668)
T PLN02260 79 EGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDE--D----ADVGNHEAS 151 (668)
T ss_pred cCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHHhCCCcc--c----cccCccccC
Confidence 57999999998432 2556789999999999999999873 4899999999999996410 0 112457877
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcccc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCW 162 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~ 162 (309)
+..|. + .+|...|.++.++..+ .+ ++++|+||++||||++... .+.+..+... ..|.+++++|++.
T Consensus 152 ~~~p~~~Y~~sK~~aE~~v~~~~~~-~~---l~~vilR~~~VyGp~~~~~--~~i~~~~~~a---~~g~~i~i~g~g~-- 220 (668)
T PLN02260 152 QLLPTNPYSATKAGAEMLVMAYGRS-YG---LPVITTRGNNVYGPNQFPE--KLIPKFILLA---MQGKPLPIHGDGS-- 220 (668)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHH-cC---CCEEEECcccccCcCCCcc--cHHHHHHHHH---hCCCCeEEecCCC--
Confidence 76654 3 4567778888777664 67 9999999999999987321 1111111111 2467888889887
Q ss_pred ccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHH
Q 045430 163 EGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQ 242 (309)
Q Consensus 163 ~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+.++++||+|+|+++.+++.. ...|++|||++++++|+.|+.+.|++.+|.+.... . .+..
T Consensus 221 -~~r~~ihV~Dva~a~~~~l~~-~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~----i-----~~~~-------- 281 (668)
T PLN02260 221 -NVRSYLYCEDVAEAFEVVLHK-GEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKS----I-----KFVE-------- 281 (668)
T ss_pred -ceEeeEEHHHHHHHHHHHHhc-CCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcce----e-----eecC--------
Confidence 779999999999998887754 34578999999999999999999999999653211 0 0000
Q ss_pred HHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCC
Q 045430 243 IVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYR 306 (309)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~ 306 (309)
..+... ....+|++|++++||+|+++++||++++++||++.+
T Consensus 282 --------~~p~~~--------------~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~ 323 (668)
T PLN02260 282 --------NRPFND--------------QRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNP 323 (668)
T ss_pred --------CCCCCc--------------ceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCh
Confidence 011110 134589999999999999999999999999999765
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=235.32 Aligned_cols=236 Identities=13% Similarity=0.046 Sum_probs=169.5
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++.+++++|+.+|.|++++|++. +++|||++||..+||.. ...|++|+.|
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~---------~~~~~~E~~~ 149 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH--GCKKLVFSSSATVYGQP---------EEVPCTEEFP 149 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCC---------CCCCCCCCCC
Confidence 6899999998421 256778999999999999999876 68999999999999853 2568999998
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC--------cchhHHHHHHHHHHHhHhCCceee
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS--------MMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~--------~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
..|. + .+|...|+++..++....+ ++.+++|+++|||+.+.. ....+ +..+..+......++.+
T Consensus 150 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~---~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 224 (352)
T PLN02240 150 LSATNPYGRTKLFIEEICRDIHASDPE---WKIILLRYFNPVGAHPSGRIGEDPKGIPNNL--MPYVQQVAVGRRPELTV 224 (352)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCC---CCEEEEeecCcCCCCccccccCCCCCCcchH--HHHHHHHHhCCCCceEE
Confidence 7654 2 3455566666665542246 899999999999985421 11111 11222332211223444
Q ss_pred cC------CccccccceeccCHHHHHHHHHHHhcC----CCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCC
Q 045430 156 PG------SKDCWEGYSVASDADLIAEQHIWAAVD----PYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGE 225 (309)
Q Consensus 156 ~G------~~~~~~~~~~~~~vd~la~a~i~aa~~----~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~ 225 (309)
.| +|. +.++++|++|+|++++.++.. +...|++|||++++++|++|+.+.+++.+|.+.+..
T Consensus 225 ~g~~~~~~~g~---~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~----- 296 (352)
T PLN02240 225 FGNDYPTKDGT---GVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLK----- 296 (352)
T ss_pred eCCCCCCCCCC---EEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCce-----
Confidence 44 455 779999999999998888753 234469999999999999999999999999653211
Q ss_pred CCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 226 RVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
..... +... ....+|++|+++ +||+|+++++++++++++||++
T Consensus 297 ------~~~~~--------------~~~~----------------~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~ 340 (352)
T PLN02240 297 ------LAPRR--------------PGDA----------------EEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASK 340 (352)
T ss_pred ------eCCCC--------------CCCh----------------hhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 00000 1110 123579999987 6999999999999999999998
Q ss_pred CCC
Q 045430 305 YRI 307 (309)
Q Consensus 305 ~~~ 307 (309)
++.
T Consensus 341 ~~~ 343 (352)
T PLN02240 341 NPY 343 (352)
T ss_pred Ccc
Confidence 764
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=232.66 Aligned_cols=236 Identities=11% Similarity=0.035 Sum_probs=165.8
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... ..+.+++++|+.++.|++++|++. +++|||++||+.+||.. ...|++|+.|
T Consensus 73 ~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~yg~~---------~~~~~~E~~~ 141 (338)
T PRK10675 73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNLIFSSSATVYGDQ---------PKIPYVESFP 141 (338)
T ss_pred CCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhhCCC---------CCCccccccC
Confidence 6899999998432 145678999999999999999987 68999999999999853 2567999987
Q ss_pred C-CCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcch------hHHHHHHHHHHHhHhCCceeec
Q 045430 87 R-LNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMN------VVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 87 ~-~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~------~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
. .|. + .+|...|.++.+++....+ ++++++|+++||||.+...+. .-..+..+..+......++.+.
T Consensus 142 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~---~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (338)
T PRK10675 142 TGTPQSPYGKSKLMVEQILTDLQKAQPD---WSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF 218 (338)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCC---CcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEe
Confidence 5 333 1 3355566666665543236 999999999999985422110 0000111222211111223333
Q ss_pred C------CccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCC
Q 045430 157 G------SKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVR 228 (309)
Q Consensus 157 G------~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~ 228 (309)
| ++. +.++++|++|+|+++++++.. +...|++|||++++.+|+.|+.+.+++.+|.+....
T Consensus 219 ~~~~~~~~g~---~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-------- 287 (338)
T PRK10675 219 GNDYPTEDGT---GVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYH-------- 287 (338)
T ss_pred CCcCCCCCCc---EEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCee--------
Confidence 3 344 679999999999999998864 233468999999999999999999999999653211
Q ss_pred HHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 229 LEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
..... +..+ ....+|++|+++ +||+|+++++++++++++|+++.
T Consensus 288 ---~~~~~--------------~~~~----------------~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~ 332 (338)
T PRK10675 288 ---FAPRR--------------EGDL----------------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_pred ---eCCCC--------------CCch----------------hhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence 00000 0111 123579999987 69999999999999999999873
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=238.10 Aligned_cols=235 Identities=11% Similarity=-0.026 Sum_probs=165.2
Q ss_pred CCCccEEEEeeccc------CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS------RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 10 ~~~vd~V~H~A~~~------~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
++++|+|||+|+.. ..++......|+.||.|++++|++. +++||||+||..+||.. ... ....|++|
T Consensus 83 ~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~--~vk~~V~~SS~~vYg~~--~~~---~~~~~~~E 155 (370)
T PLN02695 83 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN--GVKRFFYASSACIYPEF--KQL---ETNVSLKE 155 (370)
T ss_pred HhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh--CCCEEEEeCchhhcCCc--ccc---CcCCCcCc
Confidence 45789999999732 1244557789999999999999886 69999999999999853 100 01236777
Q ss_pred CC--CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--chhHHHHHHHHHHHhHhCCceeec
Q 045430 84 DL--PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--MNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 84 ~~--p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
+. |..|. + .+|...|+++..+..+ .+ ++++++||++||||+.... ...+....+...+ + .+.+++++
T Consensus 156 ~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~-~g---~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~ 229 (370)
T PLN02695 156 SDAWPAEPQDAYGLEKLATEELCKHYTKD-FG---IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAL-T-STDEFEMW 229 (370)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHH-hC---CCEEEEEECCccCCCCCccccccccHHHHHHHHH-c-CCCCeEEe
Confidence 65 33332 1 2344455555555553 68 9999999999999975311 0011111111122 1 24677888
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++. +.++++|++|+++++++++..+ .+++|||++++.+|+.|+.+.|++.+|.+.+.. ..|.
T Consensus 230 g~g~---~~r~~i~v~D~a~ai~~~~~~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~---~~~~--------- 292 (370)
T PLN02695 230 GDGK---QTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIK---HIPG--------- 292 (370)
T ss_pred CCCC---eEEeEEeHHHHHHHHHHHHhcc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCce---ecCC---------
Confidence 8887 7799999999999988877653 368999999999999999999999998643211 0000
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
+... ..+.+|++|+++ +||.|+++++++++++++|+++
T Consensus 293 --------------~~~~----------------~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~ 331 (370)
T PLN02695 293 --------------PEGV----------------RGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKE 331 (370)
T ss_pred --------------CCCc----------------cccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0000 022479999997 6999999999999999999976
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=230.32 Aligned_cols=195 Identities=17% Similarity=0.146 Sum_probs=144.2
Q ss_pred cCCCCccEEEEeecc-c--C-CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWA-S--R-PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~-~--~-~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
+.++|||+|||+|+. . . .+.++++++||.||+|||+||+++ ++|||||+||.+|++.... + .+-...+|
T Consensus 62 ~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~~~--~---~~~~~~dE 134 (280)
T PF01073_consen 62 EALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDNYK--G---DPIINGDE 134 (280)
T ss_pred HHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEeccC--C---CCcccCCc
Confidence 356778999999983 2 2 256779999999999999999987 7999999999999986210 0 01223578
Q ss_pred CCCCCCcccchHHHHHHHHHHHHhcCC------CcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 84 DLPRLNVTNFYYTQEDILFEEVEKRKG------PLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 84 ~~p~~p~p~~~y~~e~~~~~~~~~~~~------~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
+.|..+.+...|+.+|.++|....... +..+.+|+|||..||||++....+.+. ...+ .|..+...|
T Consensus 135 ~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~------~~~~-~g~~~~~~g 207 (280)
T PF01073_consen 135 DTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLV------KMVR-SGLFLFQIG 207 (280)
T ss_pred CCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhh------HHHH-hcccceeec
Confidence 776544444457766666665431111 113999999999999999976554332 1222 344445567
Q ss_pred CccccccceeccCHHHHHHHHHHHhcC-------CCCCCcceeecCCCccc-HHHHHHHHHHHhccccCC
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVD-------PYARNEAFNCSNGDVFK-WKHLWKVLAEQFEIENYG 219 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~-------~~a~g~~fNI~~g~~~s-~~el~~~i~~~~G~~~~~ 219 (309)
++. +..|++||+|+|+|+++|+.. +.+.||+|+|+|+++++ +.|++..+.+.+|.+.+.
T Consensus 208 ~~~---~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 208 DGN---NLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred CCC---ceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 766 678999999999999999752 24679999999999999 999999999999988664
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=223.00 Aligned_cols=230 Identities=15% Similarity=0.105 Sum_probs=173.3
Q ss_pred CCCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
+.+||+|||+|+...+ ++-+.+..|+.||.|+|--|++. + +||++.||+.|||.+. ..|..|+
T Consensus 89 ~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv--~-aR~l~aSTseVYgdp~---------~hpq~e~ 156 (350)
T KOG1429|consen 89 LKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV--G-ARFLLASTSEVYGDPL---------VHPQVET 156 (350)
T ss_pred HHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh--C-ceEEEeecccccCCcc---------cCCCccc
Confidence 4579999999994333 66778899999999999999998 3 8999999999999873 4455565
Q ss_pred CCC--CCc-ccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 85 LPR--LNV-TNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 85 ~p~--~p~-p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.-. .|. |.+-|. .|.++..|.++ .| +.+.|.|++|.|||...=.-.++.+-++-+++ .+.|+.++
T Consensus 157 ywg~vnpigpr~cydegKr~aE~L~~~y~k~-~g---iE~rIaRifNtyGPrm~~~dgrvvsnf~~q~l---r~epltv~ 229 (350)
T KOG1429|consen 157 YWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ-EG---IEVRIARIFNTYGPRMHMDDGRVVSNFIAQAL---RGEPLTVY 229 (350)
T ss_pred cccccCcCCchhhhhHHHHHHHHHHHHhhcc-cC---cEEEEEeeecccCCccccCCChhhHHHHHHHh---cCCCeEEE
Confidence 422 232 333344 55566666664 68 99999999999999763112444433444443 47899999
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|+|. |+|+|+||+|++++++..+..+.. +.|||+|.+.+|..||.+.+.+..|-..... ....
T Consensus 230 g~G~---qtRSF~yvsD~Vegll~Lm~s~~~--~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~-----------~~~~- 292 (350)
T KOG1429|consen 230 GDGK---QTRSFQYVSDLVEGLLRLMESDYR--GPVNIGNPGEFTMLELAEMVKELIGPVSEIE-----------FVEN- 292 (350)
T ss_pred cCCc---ceEEEEeHHHHHHHHHHHhcCCCc--CCcccCCccceeHHHHHHHHHHHcCCCccee-----------ecCC-
Confidence 9999 899999999999998887776543 4699999999999999999999886443321 1100
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
. +++. ..+..|++||++ |||.|.++|+|||..|+.|+|+
T Consensus 293 ------------~-~Ddp----------------~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~ 332 (350)
T KOG1429|consen 293 ------------G-PDDP----------------RKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRE 332 (350)
T ss_pred ------------C-CCCc----------------cccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence 0 1111 256789999987 7999999999999999999986
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=227.24 Aligned_cols=235 Identities=17% Similarity=0.177 Sum_probs=163.2
Q ss_pred CCccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+.. ..++.+.+++|+.||.|++++|.+.. +++|||++||..+|+.+....+ ...+++|+.
T Consensus 76 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~SS~~~~~~~~~~~~----~~~~~~E~~ 150 (325)
T PLN02989 76 DGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTSSMAAVLAPETKLG----PNDVVDETF 150 (325)
T ss_pred cCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecchhheecCCccCC----CCCccCcCC
Confidence 3589999999842 12446688999999999999998753 4789999999988865310000 134689998
Q ss_pred CCCCc----c-----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 86 PRLNV----T-----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 86 p~~p~----p-----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
+..|. + .+|+..|+++..+..+ .+ ++++++||++||||++....+.. ...+..+. .|.++ +
T Consensus 151 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~ilR~~~vyGp~~~~~~~~~--~~~i~~~~--~~~~~-~- 220 (325)
T PLN02989 151 FTNPSFAEERKQWYVLSKTLAEDAAWRFAKD-NE---IDLIVLNPGLVTGPILQPTLNFS--VAVIVELM--KGKNP-F- 220 (325)
T ss_pred CCchhHhcccccchHHHHHHHHHHHHHHHHH-cC---CeEEEEcCCceeCCCCCCCCCch--HHHHHHHH--cCCCC-C-
Confidence 77653 1 2344566666666553 57 99999999999999874322211 11222222 24332 2
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
+. +.++++||+|+|+++++++.++.. ++.||++ |+.+|++|+++.|++.++... . + ..
T Consensus 221 ~~-----~~r~~i~v~Dva~a~~~~l~~~~~-~~~~ni~-~~~~s~~ei~~~i~~~~~~~~--~-----~--------~~ 278 (325)
T PLN02989 221 NT-----THHRFVDVRDVALAHVKALETPSA-NGRYIID-GPVVTIKDIENVLREFFPDLC--I-----A--------DR 278 (325)
T ss_pred CC-----cCcCeeEHHHHHHHHHHHhcCccc-CceEEEe-cCCCCHHHHHHHHHHHCCCCC--C-----C--------CC
Confidence 22 447999999999999998876544 5699995 668999999999999987321 1 0 00
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCC
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRI 307 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~ 307 (309)
+..... . + .....+|++|++++||+|.++++||++++++|||+.|.
T Consensus 279 --------------~~~~~~-~-----~-----~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~ 324 (325)
T PLN02989 279 --------------NEDITE-L-----N-----SVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCL 324 (325)
T ss_pred --------------CCCccc-c-----c-----ccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 000000 0 0 01347899999999999999999999999999999875
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=229.61 Aligned_cols=240 Identities=13% Similarity=0.082 Sum_probs=161.5
Q ss_pred CCccEEEEeeccc---CCCh-HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC-
Q 045430 11 TDVTHIFYVTWAS---RPTE-AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL- 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~---~~~~-~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~- 85 (309)
+++|+|||+|+.. ..++ .+++++|+.||.|+++++.+.. +++||||+||.++||.. +.. ....|++|+.
T Consensus 79 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~--~~~---~~~~~~~E~~~ 152 (338)
T PLN00198 79 AGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSIN--KLS---GTGLVMNEKNW 152 (338)
T ss_pred hcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeecc--CCC---CCCceeccccC
Confidence 4689999999832 1233 3577999999999999998763 58999999999999853 100 0134566653
Q ss_pred --------CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 86 --------PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 86 --------p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
+..|. + .+|+..|.++.+++.+ .+ ++++++||++||||++....+... .+...+ ..+.++.
T Consensus 153 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~~~R~~~vyGp~~~~~~~~~~--~~~~~~--~~~~~~~ 224 (338)
T PLN00198 153 TDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE-NN---IDLITVIPTLMAGPSLTSDIPSSL--SLAMSL--ITGNEFL 224 (338)
T ss_pred CchhhhhhcCCccchhHHHHHHHHHHHHHHHHh-cC---ceEEEEeCCceECCCccCCCCCcH--HHHHHH--HcCCccc
Confidence 11122 1 3355566666666653 67 999999999999998642222111 111111 1355555
Q ss_pred ecC-Cccc-cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHH
Q 045430 155 FPG-SKDC-WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEI 232 (309)
Q Consensus 155 ~~G-~~~~-~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~ 232 (309)
+.| ++.+ +...+|++||+|+|+++++++..+.. ++.|| ++|..+|+.|+.+.|.+.++... . +.. +
T Consensus 225 ~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~-~~~~~-~~~~~~s~~el~~~i~~~~~~~~--~-----~~~---~ 292 (338)
T PLN00198 225 INGLKGMQMLSGSISITHVEDVCRAHIFLAEKESA-SGRYI-CCAANTSVPELAKFLIKRYPQYQ--V-----PTD---F 292 (338)
T ss_pred cccccccccccCCcceeEHHHHHHHHHHHhhCcCc-CCcEE-EecCCCCHHHHHHHHHHHCCCCC--C-----Ccc---c
Confidence 555 3332 12347999999999999988876533 45684 55678999999999998776311 1 100 0
Q ss_pred HhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCC
Q 045430 233 MRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIV 308 (309)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~i 308 (309)
.. .+.. ....+|.+|++++||+|+++++||++++++|||+.+++
T Consensus 293 ~~----------------~~~~----------------~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~~~ 336 (338)
T PLN00198 293 GD----------------FPSK----------------AKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLL 336 (338)
T ss_pred cc----------------cCCC----------------CccccChHHHHhCCceecCcHHHHHHHHHHHHHHcCCC
Confidence 00 0000 12357999999899999999999999999999999986
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=229.80 Aligned_cols=242 Identities=12% Similarity=0.017 Sum_probs=167.7
Q ss_pred HHhccCCCCccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 4 QAKLSKLTDVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.+.++.. ++|+|||+|+.. ..++.+.+++|+.|+.|++++|++.+ .++|||++||.++||.. . ..
T Consensus 68 ~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS~~vyg~~--~------~~ 137 (349)
T TIGR02622 68 RKAIAEF-KPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTSDKCYRND--E------WV 137 (349)
T ss_pred HHHHhhc-CCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEechhhhCCC--C------CC
Confidence 3444443 579999999832 12567788999999999999998753 37899999999999863 0 13
Q ss_pred CCCCCCCCCCCc-c--cchHHHHHHHHHHHHhc------CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 79 TPFTEDLPRLNV-T--NFYYTQEDILFEEVEKR------KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 79 ~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~------~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
.|.+|+.+..|. + .+|+..|.+++.+..+. .+ ++++++||++||||++... ..+.+..+ ..+ ..
T Consensus 138 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~---i~~~~lR~~~vyGp~~~~~-~~~~~~~~-~~~--~~ 210 (349)
T TIGR02622 138 WGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHG---IKIASARAGNVIGGGDWAE-DRLIPDVI-RAF--SS 210 (349)
T ss_pred CCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCC---CcEEEEccCcccCCCcchh-hhhhHHHH-HHH--hc
Confidence 478888876554 2 45666777776655421 26 9999999999999986211 11111111 111 23
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcC----CCCCCcceeecCC--CcccHHHHHHHHHHHhccccCCCCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD----PYARNEAFNCSNG--DVFKWKHLWKVLAEQFEIENYGLPQD 223 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~----~~a~g~~fNI~~g--~~~s~~el~~~i~~~~G~~~~~~~~~ 223 (309)
|.++++ +++. +.+|++|++|+|++++.++.. +...+++|||++| +++|..|++..+++.++.....+
T Consensus 211 g~~~~~-~~g~---~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~--- 283 (349)
T TIGR02622 211 NKIVII-RNPD---ATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEW--- 283 (349)
T ss_pred CCCeEE-CCCC---cccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCce---
Confidence 667665 4555 779999999999999887753 1234789999975 78999999999998877321111
Q ss_pred CCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHH
Q 045430 224 GERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKM 302 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~ 302 (309)
.... ... .+... ....+|++|+++ +||+|++++++|++++++|+
T Consensus 284 --~~~~---~~~--------------~~~~~----------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~ 328 (349)
T TIGR02622 284 --EDDS---DLN--------------HPHEA----------------RLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWY 328 (349)
T ss_pred --eecc---CCC--------------CCccc----------------ceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 0000 000 01111 134689999988 69999999999999999999
Q ss_pred HH
Q 045430 303 KT 304 (309)
Q Consensus 303 r~ 304 (309)
++
T Consensus 329 ~~ 330 (349)
T TIGR02622 329 KA 330 (349)
T ss_pred HH
Confidence 75
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=223.74 Aligned_cols=232 Identities=10% Similarity=0.018 Sum_probs=160.1
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||||+.... +++..+++|+.||.|++++|++. ++ ||||+||..|||.. ...|.+|+++
T Consensus 54 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~--g~-~~v~~Ss~~Vy~~~---------~~~p~~E~~~ 121 (299)
T PRK09987 54 RPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV--GA-WVVHYSTDYVFPGT---------GDIPWQETDA 121 (299)
T ss_pred CCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEccceEECCC---------CCCCcCCCCC
Confidence 58999999984322 55667899999999999999987 54 79999999999864 2568999988
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC--cccccc
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS--KDCWEG 164 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~--~~~~~~ 164 (309)
.. |.+.|+..|+..|....... .+++|+||++||||++.++.+. +...+ + .+.+++++|+ +. +
T Consensus 122 ~~--P~~~Yg~sK~~~E~~~~~~~---~~~~ilR~~~vyGp~~~~~~~~-----~~~~~-~-~~~~~~v~~d~~g~---~ 186 (299)
T PRK09987 122 TA--PLNVYGETKLAGEKALQEHC---AKHLIFRTSWVYAGKGNNFAKT-----MLRLA-K-EREELSVINDQFGA---P 186 (299)
T ss_pred CC--CCCHHHHHHHHHHHHHHHhC---CCEEEEecceecCCCCCCHHHH-----HHHHH-h-cCCCeEEeCCCcCC---C
Confidence 55 44568888887776653345 6789999999999986544322 11122 1 3667887777 43 3
Q ss_pred ceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCC-CCCCCCCHHHHHhccHHHHHHH
Q 045430 165 YSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLP-QDGERVRLEEIMRGKEGVWEQI 243 (309)
Q Consensus 165 ~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
.+++..+||+++++..++..+. .+++|||++++++||.|+...|.+.++..+...+ ..-.+.+.. ...
T Consensus 187 ~~~~~~~d~~~~~~~~~~~~~~-~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~-~~~--------- 255 (299)
T PRK09987 187 TGAELLADCTAHAIRVALNKPE-VAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTS-AYP--------- 255 (299)
T ss_pred CCHHHHHHHHHHHHHHhhccCC-CCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchh-hcC---------
Confidence 4455567778888776665432 3469999999999999999999886553221100 000111111 000
Q ss_pred HHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHH
Q 045430 244 VKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMK 303 (309)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r 303 (309)
.+-.+ ..+..+|++|+++ +||+|. +++||++++++.|-
T Consensus 256 --------~~~~r-------------p~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~~ 294 (299)
T PRK09987 256 --------TPARR-------------PHNSRLNTEKFQQNFALVLP-DWQVGVKRMLTELF 294 (299)
T ss_pred --------CCCCC-------------CCcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHHh
Confidence 00001 1255789999998 699986 99999999998763
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=222.25 Aligned_cols=257 Identities=16% Similarity=0.110 Sum_probs=174.4
Q ss_pred CCCccEEEEeeccc---CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS---RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 10 ~~~vd~V~H~A~~~---~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++++|+|||+|+.. ..++++++++|+.++.|+++++++. +++|||++||..+||.. . ...|.+|+.+
T Consensus 62 ~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~----~----~~~~~~e~~~ 131 (328)
T TIGR03466 62 VAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA--GVERVVYTSSVATLGVR----G----DGTPADETTP 131 (328)
T ss_pred HhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEechhhcCcC----C----CCCCcCccCC
Confidence 44689999999732 3367789999999999999999876 68999999999999852 0 2457899988
Q ss_pred CCCc-ccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcc
Q 045430 87 RLNV-TNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKD 160 (309)
Q Consensus 87 ~~p~-p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~ 160 (309)
..|. +...|+ .|+++.++..+ .+ ++++++||++||||++........ ++..... .+.+ .+. +
T Consensus 132 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~ilR~~~~~G~~~~~~~~~~~---~~~~~~~-~~~~-~~~-~-- 199 (328)
T TIGR03466 132 SSLDDMIGHYKRSKFLAEQAALEMAAE-KG---LPVVIVNPSTPIGPRDIKPTPTGR---IIVDFLN-GKMP-AYV-D-- 199 (328)
T ss_pred CCcccccChHHHHHHHHHHHHHHHHHh-cC---CCEEEEeCCccCCCCCCCCCcHHH---HHHHHHc-CCCc-eee-C--
Confidence 7654 223354 55666665553 57 999999999999998743222111 1111111 1222 222 2
Q ss_pred ccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHH
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
...+++|++|+|++++.++.++ ..|+.||++ ++.+|+.|+++.|++.+|.+.... ..|.++...+....+.+
T Consensus 200 ---~~~~~i~v~D~a~a~~~~~~~~-~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~~~~~~~~~~~~~ 271 (328)
T TIGR03466 200 ---TGLNLVHVDDVAEGHLLALERG-RIGERYILG-GENLTLKQILDKLAEITGRPAPRV---KLPRWLLLPVAWGAEAL 271 (328)
T ss_pred ---CCcceEEHHHHHHHHHHHHhCC-CCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHHHHH
Confidence 2258999999999999888764 468899996 688999999999999999764322 24444443333222222
Q ss_pred HHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHCCCC
Q 045430 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTYRIV 308 (309)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~~~i 308 (309)
..+ .+.. +.++. ..++. . ..+..+|++|+++ +||+|. ++++++.++++||++.|.+
T Consensus 272 ~~~---~~~~-~~~~~----~~~~~-~--~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~~ 328 (328)
T TIGR03466 272 ARL---TGKE-PRVTV----DGVRM-A--KKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGYL 328 (328)
T ss_pred HHh---cCCC-CCCCH----HHHHH-H--hccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCCC
Confidence 221 2221 11111 11111 1 1356799999987 799996 9999999999999998864
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-28 Score=226.80 Aligned_cols=234 Identities=16% Similarity=0.140 Sum_probs=157.7
Q ss_pred CCccEEEEeeccc-C--CCh-HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC-CCCCC
Q 045430 11 TDVTHIFYVTWAS-R--PTE-AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP-FTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~--~~~-~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p-~~E~~ 85 (309)
+++|+|||+|+.. . .++ .+++++|+.||.|++++|++.+ .++||||+||..+||.. . ...| .+|+.
T Consensus 76 ~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~--~------~~~~~~~E~~ 146 (351)
T PLN02650 76 RGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVE--E------HQKPVYDEDC 146 (351)
T ss_pred hCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccC--C------CCCCccCccc
Confidence 4689999999832 1 133 4688999999999999998863 37999999999888743 0 1233 46663
Q ss_pred CC------CC-cc-----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 86 PR------LN-VT-----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 86 p~------~p-~p-----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
.. .+ .| .+|+..|.++.+++.+ .+ ++++++||++||||++........ ...+....+...
T Consensus 147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g---i~~~ilRp~~v~Gp~~~~~~~~~~----~~~~~~~~~~~~ 218 (351)
T PLN02650 147 WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE-NG---LDFISIIPTLVVGPFISTSMPPSL----ITALSLITGNEA 218 (351)
T ss_pred CCchhhhhccccccchHHHHHHHHHHHHHHHHHH-cC---CeEEEECCCceECCCCCCCCCccH----HHHHHHhcCCcc
Confidence 21 11 12 2345566666666654 68 999999999999998743221111 111111123222
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHH
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIM 233 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~ 233 (309)
. .+.. +.+|++||+|+|+++++++..+.. ++.| +++++.+|+.|+.+.|++.++.... + ..+
T Consensus 219 ~-~~~~----~~r~~v~V~Dva~a~~~~l~~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~~~-~------~~~---- 280 (351)
T PLN02650 219 H-YSII----KQGQFVHLDDLCNAHIFLFEHPAA-EGRY-ICSSHDATIHDLAKMLREKYPEYNI-P------ARF---- 280 (351)
T ss_pred c-cCcC----CCcceeeHHHHHHHHHHHhcCcCc-CceE-EecCCCcCHHHHHHHHHHhCcccCC-C------CCC----
Confidence 2 2222 347999999999999998876544 4478 5566789999999999998762211 1 110
Q ss_pred hccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCCC
Q 045430 234 RGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309 (309)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~iP 309 (309)
.. . +... ....+|++|++++||+|++++++|++++++|+++.+++|
T Consensus 281 ~~-------------~-~~~~----------------~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~ 326 (351)
T PLN02650 281 PG-------------I-DEDL----------------KSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP 326 (351)
T ss_pred CC-------------c-Cccc----------------ccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 00 0 1111 133579999988999999999999999999999999875
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-28 Score=221.17 Aligned_cols=242 Identities=11% Similarity=0.002 Sum_probs=173.6
Q ss_pred HHHhccCCCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
+++++++. .+|+|||+|+... .++++++++|+.|+.+++++|.+...+ .|+|++||..+||.. . .
T Consensus 65 ~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~Ss~~v~g~~----~----~ 134 (317)
T TIGR01181 65 VSRLFTEH-QPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHE-FRFHHISTDEVYGDL----E----K 134 (317)
T ss_pred HHHHHhhc-CCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC-ceEEEeeccceeCCC----C----C
Confidence 33444432 4899999998432 256678999999999999999876322 289999999999964 1 1
Q ss_pred CCCCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
..|.+|+.+..|. + .+|...|.++.+++.+ .+ ++++++||+.||||+.... . +.+ .++..+ ..+.+++
T Consensus 135 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~i~R~~~i~G~~~~~~-~-~~~-~~~~~~--~~~~~~~ 205 (317)
T TIGR01181 135 GDAFTETTPLAPSSPYSASKAASDHLVRAYHRT-YG---LPALITRCSNNYGPYQFPE-K-LIP-LMITNA--LAGKPLP 205 (317)
T ss_pred CCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHH-hC---CCeEEEEeccccCCCCCcc-c-HHH-HHHHHH--hcCCCce
Confidence 2368888876554 1 3355667777766653 57 9999999999999975321 1 111 111222 2356777
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHh
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMR 234 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~ 234 (309)
++|++. +.++++|++|+++++..++.++ ..|++||+++++++|+.|+.+.|++.+|.+.... .+..
T Consensus 206 ~~~~g~---~~~~~i~v~D~a~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~----------~~~~ 271 (317)
T TIGR01181 206 VYGDGQ---QVRDWLYVEDHCRAIYLVLEKG-RVGETYNIGGGNERTNLEVVETILELLGKDEDLI----------THVE 271 (317)
T ss_pred EeCCCc---eEEeeEEHHHHHHHHHHHHcCC-CCCceEEeCCCCceeHHHHHHHHHHHhCCCcccc----------cccC
Confidence 778887 6799999999999988887653 4679999999999999999999999999542211 0000
Q ss_pred ccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHCCC
Q 045430 235 GKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTYRI 307 (309)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~~~ 307 (309)
.. +.. ..+..+|++|+++ +||+|++++++++.++++||++.++
T Consensus 272 ~~--------------~~~----------------~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~ 315 (317)
T TIGR01181 272 DR--------------PGH----------------DRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEW 315 (317)
T ss_pred CC--------------ccc----------------hhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccC
Confidence 00 000 0123589999986 6999999999999999999998765
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-28 Score=223.38 Aligned_cols=232 Identities=16% Similarity=0.132 Sum_probs=158.7
Q ss_pred CCccEEEEeeccc---CCChH-HHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCcc--ccCCccccCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS---RPTEA-ENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKH--YVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 11 ~~vd~V~H~A~~~---~~~~~-~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~v--YG~~~~~~~~~~~~~~p~~E~ 84 (309)
+++|+|||+|+.. ..++. +++++|+.||.|++++|.+. .+++|||++||.++ ||.. . . ....|++|+
T Consensus 75 ~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~v~~SS~~~~~y~~~--~-~---~~~~~~~E~ 147 (322)
T PLN02662 75 DGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV-PSVKRVVVTSSMAAVAYNGK--P-L---TPDVVVDET 147 (322)
T ss_pred cCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCCEEEEccCHHHhcCCCc--C-C---CCCCcCCcc
Confidence 4689999999842 22443 78899999999999999875 26899999999874 6532 0 0 013478998
Q ss_pred CCCCCc-c---cchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 85 LPRLNV-T---NFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 85 ~p~~p~-p---~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.+..|. + .+-|+ .|.++.++..+ .+ ++++++||++||||+......... ..+...+ .|.+ .
T Consensus 148 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~~lRp~~v~Gp~~~~~~~~~~-~~~~~~~---~~~~-~- 217 (322)
T PLN02662 148 WFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE-NG---IDMVTINPAMVIGPLLQPTLNTSA-EAILNLI---NGAQ-T- 217 (322)
T ss_pred cCCChhHhhcccchHHHHHHHHHHHHHHHHHH-cC---CcEEEEeCCcccCCCCCCCCCchH-HHHHHHh---cCCc-c-
Confidence 876552 1 12344 55555555553 57 999999999999998632211111 1111111 2333 1
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRG 235 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~ 235 (309)
.++ +.+|++||+|+|++++.++..+... +.||++ |+.+|++|+.+.|.+.++... .|... .
T Consensus 218 ~~~-----~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~-g~~~s~~e~~~~i~~~~~~~~-------~~~~~----~- 278 (322)
T PLN02662 218 FPN-----ASYRWVDVRDVANAHIQAFEIPSAS-GRYCLV-ERVVHYSEVVKILHELYPTLQ-------LPEKC----A- 278 (322)
T ss_pred CCC-----CCcCeEEHHHHHHHHHHHhcCcCcC-CcEEEe-CCCCCHHHHHHHHHHHCCCCC-------CCCCC----C-
Confidence 222 4589999999999999988776444 479997 678999999999999876321 11110 0
Q ss_pred cHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCC
Q 045430 236 KEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIV 308 (309)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~i 308 (309)
+. .+.. ....+|++|++++||++ +++++|++++++||+++|++
T Consensus 279 ------------~~-~~~~----------------~~~~~d~~k~~~lg~~~-~~~~~~l~~~~~~~~~~~~~ 321 (322)
T PLN02662 279 ------------DD-KPYV----------------PTYQVSKEKAKSLGIEF-IPLEVSLKDTVESLKEKGFL 321 (322)
T ss_pred ------------Cc-cccc----------------cccccChHHHHHhCCcc-ccHHHHHHHHHHHHHHcCCC
Confidence 00 0111 13468999999999997 69999999999999999986
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=227.86 Aligned_cols=226 Identities=13% Similarity=0.120 Sum_probs=167.8
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
..++|+|||+++. +..+++++++||++. +++||||+||..+||.. ...|..|+++..|
T Consensus 128 ~~~~d~Vi~~~~~-----------~~~~~~~ll~aa~~~--gvkr~V~~SS~~vyg~~---------~~~p~~E~~~~~p 185 (378)
T PLN00016 128 GAGFDVVYDNNGK-----------DLDEVEPVADWAKSP--GLKQFLFCSSAGVYKKS---------DEPPHVEGDAVKP 185 (378)
T ss_pred cCCccEEEeCCCC-----------CHHHHHHHHHHHHHc--CCCEEEEEccHhhcCCC---------CCCCCCCCCcCCC
Confidence 3579999998652 356899999999986 79999999999999853 2457888887655
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc-hhHHHHHHHHHHHhHhCCceeecCCccccccceec
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM-NVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA 168 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~-~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~ 168 (309)
. .+|...|.++++ .+ ++|+|+||++||||++.+.+ .. ++..+ ..+.+++++|++. +.+++
T Consensus 186 ~-~sK~~~E~~l~~-----~~---l~~~ilRp~~vyG~~~~~~~~~~-----~~~~~--~~~~~i~~~g~g~---~~~~~ 246 (378)
T PLN00016 186 K-AGHLEVEAYLQK-----LG---VNWTSFRPQYIYGPGNNKDCEEW-----FFDRL--VRGRPVPIPGSGI---QLTQL 246 (378)
T ss_pred c-chHHHHHHHHHH-----cC---CCeEEEeceeEECCCCCCchHHH-----HHHHH--HcCCceeecCCCC---eeece
Confidence 4 257777777642 47 99999999999999864321 11 11122 2366788888877 67899
Q ss_pred cCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhC
Q 045430 169 SDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQ 248 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (309)
+|++|+|++++.++.++...|++|||++++.+|+.|+++.|++.+|.+.... .+....+ . | +
T Consensus 247 i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~-----~~~~~~~-~-----~-------~ 308 (378)
T PLN00016 247 GHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIV-----HYDPKAV-G-----F-------G 308 (378)
T ss_pred ecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCcee-----ecCcccc-C-----c-------c
Confidence 9999999999998887766789999999999999999999999999764211 1111000 0 0 0
Q ss_pred CC-cccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHCCCC
Q 045430 249 LQ-LTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTYRIV 308 (309)
Q Consensus 249 l~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~~~i 308 (309)
.+ .-+.. ..+..+|++|+++ +||+|+++++|++.++++||++.|.+
T Consensus 309 ~~~~~p~~--------------~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 309 AKKAFPFR--------------DQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred cccccccc--------------ccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 00 01111 0134579999987 69999999999999999999998865
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-28 Score=222.12 Aligned_cols=233 Identities=11% Similarity=0.103 Sum_probs=161.3
Q ss_pred CCCccEEEEeeccc---CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS---RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 10 ~~~vd~V~H~A~~~---~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
+.++|+|||+|+.. ..++.+.+++|+.||.|++++|++. ++ |||++||..+||.. ..+.+|+.+
T Consensus 64 ~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~-~~v~~SS~~vy~~~----------~~~~~e~~~ 130 (314)
T TIGR02197 64 FGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK--GI-PFIYASSAATYGDG----------EAGFREGRE 130 (314)
T ss_pred cCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh--CC-cEEEEccHHhcCCC----------CCCcccccC
Confidence 35799999999843 2266778899999999999999886 55 79999999999853 345677664
Q ss_pred C-CCc-c--cchHHHHHHHHHHHHh-cCCCcceeEEeecCCceecccCCC--cchhHHHHHHHHHHHhHhCCceeec---
Q 045430 87 R-LNV-T--NFYYTQEDILFEEVEK-RKGPLSLTWSVHRPHIIFGFSPYS--MMNVVGTLCVYAAICKHEGVPLLFP--- 156 (309)
Q Consensus 87 ~-~p~-p--~~~y~~e~~~~~~~~~-~~~~~~~~~~ilRP~~VyGp~~~~--~~~~~~~~~i~~~l~~~~g~~~~~~--- 156 (309)
. .|. + .+|...|.++.++... ..+ ++++++||++||||++.. .+..+. ..++..+ ..+.++...
T Consensus 131 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~---~~~~~lR~~~vyG~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~ 204 (314)
T TIGR02197 131 LERPLNVYGYSKFLFDQYVRRRVLPEALS---AQVVGLRYFNVYGPREYHKGKMASVA-FHLFNQI--KAGGNVKLFKSS 204 (314)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhHhhccC---CceEEEEEeeccCCCCCCCCCcccHH-HHHHHHH--hcCCCeEEecCc
Confidence 3 232 1 2344455555554321 234 789999999999998632 111111 1122222 234555443
Q ss_pred ---CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHH
Q 045430 157 ---GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIM 233 (309)
Q Consensus 157 ---G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~ 233 (309)
|+|. +.++++|++|+++++++++.. ..+++|||++++++|+.|+.+.|++.+|.+.... ..|.+. .
T Consensus 205 ~~~~~g~---~~~~~i~v~D~a~~i~~~~~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~~--~- 273 (314)
T TIGR02197 205 EGFKDGE---QLRDFVYVKDVVDVNLWLLEN--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIE---YIPMPE--A- 273 (314)
T ss_pred cccCCCC---ceeeeEEHHHHHHHHHHHHhc--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcce---eccCcc--c-
Confidence 3444 679999999999999988866 3567999999999999999999999999653211 011110 0
Q ss_pred hccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHH
Q 045430 234 RGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMK 303 (309)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r 303 (309)
+. ... .....+|++|+++ +||+|+++++||++++++|++
T Consensus 274 ---------------~~-~~~---------------~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 274 ---------------LR-GKY---------------QYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred ---------------cc-ccc---------------ccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence 00 000 0134689999998 599999999999999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=216.01 Aligned_cols=235 Identities=16% Similarity=0.132 Sum_probs=169.9
Q ss_pred Cc-cEEEEeecccC-C-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 12 DV-THIFYVTWASR-P-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 12 ~v-d~V~H~A~~~~-~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
++ |.|||+|+... . ++.+++++|+.||+|++++|++. +++||||.||..+||.. + ...+++|+
T Consensus 63 ~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~--~~~~~v~~ss~~~~~~~--~------~~~~~~E~ 132 (314)
T COG0451 63 GVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA--GVKRFVFASSVSVVYGD--P------PPLPIDED 132 (314)
T ss_pred cCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCCCceECCC--C------CCCCcccc
Confidence 44 99999998432 2 23469999999999999999985 79999998888888753 1 24479998
Q ss_pred -CCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcch-hHHHHHHHHHHHhHhCCc-eeecCC
Q 045430 85 -LPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMN-VVGTLCVYAAICKHEGVP-LLFPGS 158 (309)
Q Consensus 85 -~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~-~~~~~~i~~~l~~~~g~~-~~~~G~ 158 (309)
.|..|. + .+|+..|+++.++.. ..+ ++++|+||++||||++...++ .+. ..+...+ ..+.+ +.+.++
T Consensus 133 ~~~~~p~~~Yg~sK~~~E~~~~~~~~-~~~---~~~~ilR~~~vyGp~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~ 205 (314)
T COG0451 133 LGPPRPLNPYGVSKLAAEQLLRAYAR-LYG---LPVVILRPFNVYGPGDKPDLSSGVV-SAFIRQL--LKGEPIIVIGGD 205 (314)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHH-HhC---CCeEEEeeeeeeCCCCCCCCCcCcH-HHHHHHH--HhCCCcceEeCC
Confidence 454443 1 334556666666665 367 999999999999999853222 121 1111122 23555 566777
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCC-cccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccH
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGD-VFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKE 237 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~-~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
+. +.++++|++|+++++++++.++... .|||++++ .+|..|+.+.+++.+|...... .+...
T Consensus 206 ~~---~~~~~i~v~D~a~~~~~~~~~~~~~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~----------~~~~~-- 268 (314)
T COG0451 206 GS---QTRDFVYVDDVADALLLALENPDGG--VFNIGSGTAEITVRELAEAVAEAVGSKAPLI----------VYIPL-- 268 (314)
T ss_pred Cc---eeEeeEeHHHHHHHHHHHHhCCCCc--EEEeCCCCCcEEHHHHHHHHHHHhCCCCcce----------eecCC--
Confidence 76 6689999999999999999876443 99999997 8999999999999999775421 00000
Q ss_pred HHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHCC
Q 045430 238 GVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTYR 306 (309)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~~ 306 (309)
...... .....+|++|+++ +||.|+.++++++.++++|+++.+
T Consensus 269 ------------~~~~~~--------------~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 269 ------------GRRGDL--------------REGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred ------------CCCCcc--------------cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 000100 1256789999986 799999999999999999998754
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-27 Score=216.62 Aligned_cols=232 Identities=18% Similarity=0.137 Sum_probs=158.4
Q ss_pred CCccEEEEeeccc---CCCh-HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccc--cCCccccCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS---RPTE-AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHY--VGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 11 ~~vd~V~H~A~~~---~~~~-~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vY--G~~~~~~~~~~~~~~p~~E~ 84 (309)
+++|+|||+|+.. ..++ .+++++|+.||.|++++|++. ++++||||+||..+| |.+ .. ....+++|+
T Consensus 76 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~~~~~--~~----~~~~~~~E~ 148 (322)
T PLN02986 76 EGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVLFRQP--PI----EANDVVDET 148 (322)
T ss_pred hCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhheecCCc--cC----CCCCCcCcc
Confidence 4689999999842 1233 457899999999999999875 369999999999875 321 00 013468888
Q ss_pred CCCCCc----ccc-----hHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 85 LPRLNV----TNF-----YYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 85 ~p~~p~----p~~-----~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
++..|. +.+ |..+|.++.++..+ .+ ++++++||++||||+.....+... .+...+ ..|.++
T Consensus 149 ~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~-~~---~~~~~lrp~~v~Gp~~~~~~~~~~--~~~~~~--~~g~~~-- 218 (322)
T PLN02986 149 FFSDPSLCRETKNWYPLSKILAENAAWEFAKD-NG---IDMVVLNPGFICGPLLQPTLNFSV--ELIVDF--INGKNL-- 218 (322)
T ss_pred cCCChHHhhccccchHHHHHHHHHHHHHHHHH-hC---CeEEEEcccceeCCCCCCCCCccH--HHHHHH--HcCCCC--
Confidence 765432 223 34456666666553 57 999999999999997532111110 011111 124442
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRG 235 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~ 235 (309)
.|. +.++++||+|+|+++++++..+.. ++.||++ |+.+|+.|+++.|++.++.. ..+ .. .
T Consensus 219 ~~~-----~~~~~v~v~Dva~a~~~al~~~~~-~~~yni~-~~~~s~~e~~~~i~~~~~~~-~~~------~~-----~- 278 (322)
T PLN02986 219 FNN-----RFYRFVDVRDVALAHIKALETPSA-NGRYIID-GPIMSVNDIIDILRELFPDL-CIA------DT-----N- 278 (322)
T ss_pred CCC-----cCcceeEHHHHHHHHHHHhcCccc-CCcEEEe-cCCCCHHHHHHHHHHHCCCC-CCC------CC-----C-
Confidence 232 558999999999999999987654 4589994 67899999999999998721 111 00 0
Q ss_pred cHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCC
Q 045430 236 KEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIV 308 (309)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~i 308 (309)
. +..... ....+|.+|++++||+|+ +++|++.+|++||++.|.|
T Consensus 279 ~--------------~~~~~~--------------~~~~~d~~~~~~lg~~~~-~l~e~~~~~~~~~~~~~~~ 322 (322)
T PLN02986 279 E--------------ESEMNE--------------MICKVCVEKVKNLGVEFT-PMKSSLRDTILSLKEKCLL 322 (322)
T ss_pred c--------------cccccc--------------cCCccCHHHHHHcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence 0 001100 012479999999999997 9999999999999999976
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-27 Score=213.43 Aligned_cols=237 Identities=11% Similarity=0.073 Sum_probs=167.1
Q ss_pred HHHhccCCCCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
+++.+.++ .+|+|||+|+.... ++++.+++|+.+|.|++++|++. +. |||++||..+||.. .
T Consensus 42 ~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~v~~Ss~~vy~~~---------~ 108 (287)
T TIGR01214 42 LERLLRAI-RPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH--GA-RLVHISTDYVFDGE---------G 108 (287)
T ss_pred HHHHHHhC-CCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeeeeecCC---------C
Confidence 44455543 46999999984322 45668899999999999999876 44 89999999999853 2
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHhCCceeec
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
..|++|+++..| .+.|+.+|...|...+..+ ++++|+||++||||++. ++... +...+ ..+.++.+.
T Consensus 109 ~~~~~E~~~~~~--~~~Y~~~K~~~E~~~~~~~---~~~~ilR~~~v~G~~~~~~~~~~-----~~~~~--~~~~~~~~~ 176 (287)
T TIGR01214 109 KRPYREDDATNP--LNVYGQSKLAGEQAIRAAG---PNALIVRTSWLYGGGGGRNFVRT-----MLRLA--GRGEELRVV 176 (287)
T ss_pred CCCCCCCCCCCC--cchhhHHHHHHHHHHHHhC---CCeEEEEeeecccCCCCCCHHHH-----HHHHh--hcCCCceEe
Confidence 568999987654 3468888877776553356 89999999999999863 33221 11121 124566666
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|+ +.++++|++|+|+++++++..+...+++|||++++.+|+.|+++.+++.+|.+.... +.+......
T Consensus 177 ~~-----~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~-----~~~~~~~~~-- 244 (287)
T TIGR01214 177 DD-----QIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLL-----HPQEVKPIS-- 244 (287)
T ss_pred cC-----CCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccc-----cCceeEeec--
Confidence 65 447899999999999999876556789999999999999999999999999765422 111000000
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHH
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWID 300 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~ 300 (309)
.. . +. .+... .....+|++|+|+ +|| +..++++++.++++
T Consensus 245 ~~---~------~~-~~~~~-------------~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~ 285 (287)
T TIGR01214 245 SK---E------YP-RPARR-------------PAYSVLDNTKLVKTLGT-PLPHWREALRAYLQ 285 (287)
T ss_pred HH---H------cC-CCCCC-------------CCccccchHHHHHHcCC-CCccHHHHHHHHHh
Confidence 00 0 00 01100 1134789999998 599 55699999998865
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=218.90 Aligned_cols=243 Identities=14% Similarity=0.096 Sum_probs=157.1
Q ss_pred CCccEEEEeecccC-------CChHHHH-----HhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASR-------PTEAENC-----EVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-------~~~~~~~-----~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
+++|+|||+|+... .++++++ +.|+.||.|++++|+++. +++|||++||.++||... ..+. ..
T Consensus 78 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~-~~~~---~~ 152 (353)
T PLN02896 78 KGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKD-SNGR---WR 152 (353)
T ss_pred cCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccc-cCCC---CC
Confidence 46899999998421 1344444 445699999999998763 589999999999998530 0000 02
Q ss_pred CCCCCCCC--CC----Cc-c-----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHH
Q 045430 79 TPFTEDLP--RL----NV-T-----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAIC 146 (309)
Q Consensus 79 ~p~~E~~p--~~----p~-p-----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~ 146 (309)
.|++|+.+ .. +. + .+|+..|.++..++.+ .+ ++++++||++||||+....++... ...+.
T Consensus 153 ~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~~lR~~~vyGp~~~~~~~~~~----~~~~~ 224 (353)
T PLN02896 153 AVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE-NG---IDLVSVITTTVAGPFLTPSVPSSI----QVLLS 224 (353)
T ss_pred CccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH-cC---CeEEEEcCCcccCCCcCCCCCchH----HHHHH
Confidence 46788732 11 11 2 2345566666666653 67 999999999999998743233211 11111
Q ss_pred hHhCCc--eeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCC
Q 045430 147 KHEGVP--LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDG 224 (309)
Q Consensus 147 ~~~g~~--~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~ 224 (309)
...|.+ +++.+........+|++||+|+|++++.++..+.. +..||+ +++++|+.|+.+.+++.++......
T Consensus 225 ~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~---- 298 (353)
T PLN02896 225 PITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA-EGRYIC-CVDSYDMSELINHLSKEYPCSNIQV---- 298 (353)
T ss_pred HhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc-CccEEe-cCCCCCHHHHHHHHHHhCCCCCccc----
Confidence 112322 22222111111347999999999999998876433 457865 5778999999999999987321100
Q ss_pred CCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHH
Q 045430 225 ERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
...... .... ...+|.+|++++||.|++++++|++++++||++
T Consensus 299 ------~~~~~~--------------~~~~-----------------~~~~~~~~~~~lGw~p~~~l~~~i~~~~~~~~~ 341 (353)
T PLN02896 299 ------RLDEEK--------------RGSI-----------------PSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVD 341 (353)
T ss_pred ------cccccc--------------cCcc-----------------ccccCHHHHHHcCCCccCCHHHHHHHHHHHHHH
Confidence 000000 0000 124688999989999999999999999999999
Q ss_pred CCCCC
Q 045430 305 YRIVP 309 (309)
Q Consensus 305 ~~~iP 309 (309)
++.+|
T Consensus 342 ~~~~~ 346 (353)
T PLN02896 342 HGFLP 346 (353)
T ss_pred CCCCC
Confidence 98765
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-26 Score=209.72 Aligned_cols=236 Identities=12% Similarity=0.070 Sum_probs=164.4
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++.+.+++|+.++.+++++|.+. +++|||++||..+||.. ...+++|+++
T Consensus 70 ~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~ss~~~~g~~---------~~~~~~e~~~ 138 (328)
T TIGR01179 70 KIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFIFSSSAAVYGEP---------SSIPISEDSP 138 (328)
T ss_pred CCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEEEecchhhcCCC---------CCCCccccCC
Confidence 6899999998421 145667899999999999999886 68999999999999853 2457899987
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc-----hhHHHHHHHHHHHhHhCCceeecC-
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM-----NVVGTLCVYAAICKHEGVPLLFPG- 157 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~-----~~~~~~~i~~~l~~~~g~~~~~~G- 157 (309)
..|. + .+|...|.++.+++.+..+ ++++|+||++||||.+...+ .....+..+.........++...|
T Consensus 139 ~~~~~~y~~sK~~~e~~~~~~~~~~~~---~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (328)
T TIGR01179 139 LGPINPYGRSKLMSERILRDLSKADPG---LSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGT 215 (328)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHhccC---CCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCC
Confidence 6644 2 2345566666665542246 99999999999999653211 000011111111111223343333
Q ss_pred -----CccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHH
Q 045430 158 -----SKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLE 230 (309)
Q Consensus 158 -----~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~ 230 (309)
++. +.++++|++|+++++..++... ...|++||+++++++|+.|+.+.+++.+|.+....
T Consensus 216 ~~~~~~g~---~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~---------- 282 (328)
T TIGR01179 216 DYPTPDGT---CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVE---------- 282 (328)
T ss_pred cccCCCCc---eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceE----------
Confidence 333 5689999999999988887542 24579999999999999999999999999654311
Q ss_pred HHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCC-hHHHHHHHHHHHHHC
Q 045430 231 EIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRN-SKNSFVNWIDKMKTY 305 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~-~~~gl~~t~~~~r~~ 305 (309)
..... .... .+..+|++|+++ +||+|.++ ++++++++++|++++
T Consensus 283 -~~~~~--------------~~~~----------------~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 283 -LAPRR--------------PGDP----------------ASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred -eCCCC--------------Cccc----------------cchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence 00000 0000 123579999987 69999998 999999999999763
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=201.19 Aligned_cols=241 Identities=13% Similarity=0.067 Sum_probs=182.6
Q ss_pred HhccCCCCccEEEEeecc-----cCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 5 AKLSKLTDVTHIFYVTWA-----SRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 5 ~~~~~~~~vd~V~H~A~~-----~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
+++-+..+.|+|+|+|+. +..++..|+..|+.||.||||+|+++ +++.+|+.||+.|||.+ ...
T Consensus 70 ~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~--~~~~~V~sssatvYG~p---------~~i 138 (343)
T KOG1371|consen 70 EKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH--NVKALVFSSSATVYGLP---------TKV 138 (343)
T ss_pred HHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc--CCceEEEecceeeecCc---------cee
Confidence 445566679999999984 23377889999999999999999998 59999999999999986 468
Q ss_pred CCCCCCCCC-Cc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceec--c----------cCCCcchhHHHHHHHH
Q 045430 80 PFTEDLPRL-NV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFG--F----------SPYSMMNVVGTLCVYA 143 (309)
Q Consensus 80 p~~E~~p~~-p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyG--p----------~~~~~~~~~~~~~i~~ 143 (309)
|++|++|.. |. | .+||..|+.+..+.. ..+ |..++||.++++| | .++++++.+..++++.
T Consensus 139 p~te~~~t~~p~~pyg~tK~~iE~i~~d~~~-~~~---~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr 214 (343)
T KOG1371|consen 139 PITEEDPTDQPTNPYGKTKKAIEEIIHDYNK-AYG---WKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGR 214 (343)
T ss_pred eccCcCCCCCCCCcchhhhHHHHHHHHhhhc-ccc---ceEEEEEeccccCccccCccCCCCccCcccccccccchhhcc
Confidence 999999877 44 3 557777777777766 367 9999999999999 3 1234555554444433
Q ss_pred HHHh--HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCC--CCcceeecCCCcccHHHHHHHHHHHhccccCC
Q 045430 144 AICK--HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYA--RNEAFNCSNGDVFKWKHLWKVLAEQFEIENYG 219 (309)
Q Consensus 144 ~l~~--~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a--~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~ 219 (309)
. +. ..|.+++.. +|. ..||.+++-|+|++++-|+..... .-.+||+++|...|..+|..++++.+|++.+.
T Consensus 215 ~-~~l~v~g~d~~t~-dgt---~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~ 289 (343)
T KOG1371|consen 215 R-PNLQVVGRDYTTI-DGT---IVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKK 289 (343)
T ss_pred c-ccceeecCccccc-CCC---eeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCc
Confidence 2 11 124454422 222 679999999999999998876433 23499999999999999999999999988764
Q ss_pred CCCCCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHH-hcCCCCcCChHHHHHHH
Q 045430 220 LPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSK-EHGFLGFRNSKNSFVNW 298 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar-~lGf~p~~~~~~gl~~t 298 (309)
. .+..+ +++.. ....|+++|+ +|||+|.+++++++++.
T Consensus 290 ~-----------~v~~R--------------~gdv~----------------~~ya~~~~a~~elgwk~~~~iee~c~dl 328 (343)
T KOG1371|consen 290 K-----------VVPRR--------------NGDVA----------------FVYANPSKAQRELGWKAKYGLQEMLKDL 328 (343)
T ss_pred c-----------ccCCC--------------CCCce----------------eeeeChHHHHHHhCCccccCHHHHHHHH
Confidence 3 22211 34432 2368999996 58999999999999999
Q ss_pred HHHHHHCC
Q 045430 299 IDKMKTYR 306 (309)
Q Consensus 299 ~~~~r~~~ 306 (309)
++|..+..
T Consensus 329 w~W~~~np 336 (343)
T KOG1371|consen 329 WRWQKQNP 336 (343)
T ss_pred HHHHhcCC
Confidence 99997653
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-24 Score=217.28 Aligned_cols=265 Identities=13% Similarity=0.053 Sum_probs=169.1
Q ss_pred cCCCCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
..++++|+|||||+.. ..++.++.++|+.||+|++++|++. ++++|||+||..+||.. ..+.+|+.
T Consensus 73 ~~l~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~~SS~~v~g~~----------~~~~~e~~ 140 (657)
T PRK07201 73 AELGDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL--QAATFHHVSSIAVAGDY----------EGVFREDD 140 (657)
T ss_pred HHhcCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc--CCCeEEEEeccccccCc----------cCcccccc
Confidence 3347899999999842 3366778999999999999999986 68999999999999853 23456655
Q ss_pred CCCCc-ccchHHHHHHHHHHHHh-cCCCcceeEEeecCCceecccCCCcchh-HHHHHHHHHHHhH--hCCceeecCCcc
Q 045430 86 PRLNV-TNFYYTQEDILFEEVEK-RKGPLSLTWSVHRPHIIFGFSPYSMMNV-VGTLCVYAAICKH--EGVPLLFPGSKD 160 (309)
Q Consensus 86 p~~p~-p~~~y~~e~~~~~~~~~-~~~~~~~~~~ilRP~~VyGp~~~~~~~~-~~~~~i~~~l~~~--~g~~~~~~G~~~ 160 (309)
...+. +..-|...|...|.... ..+ ++++|+||++||||+....... -....++..+.+. ....++..+.+.
T Consensus 141 ~~~~~~~~~~Y~~sK~~~E~~~~~~~g---~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (657)
T PRK07201 141 FDEGQGLPTPYHRTKFEAEKLVREECG---LPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG 217 (657)
T ss_pred chhhcCCCCchHHHHHHHHHHHHHcCC---CcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence 32222 22336666665554432 256 9999999999999865321110 0001111112111 111233444444
Q ss_pred ccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc---H
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK---E 237 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~---~ 237 (309)
...++++|||++++++.++..+...|++|||++++++|+.|+.+.|++.+|.+....+...+|.++...+... .
T Consensus 218 ---~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~ 294 (657)
T PRK07201 218 ---GRTNIVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPV 294 (657)
T ss_pred ---CeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchh
Confidence 4579999999999998888766677999999999999999999999999998751001123455444443321 1
Q ss_pred HHHHH-HHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-c-C--CCCcCChHHHHHHHHHHHH
Q 045430 238 GVWEQ-IVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-H-G--FLGFRNSKNSFVNWIDKMK 303 (309)
Q Consensus 238 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-l-G--f~p~~~~~~gl~~t~~~~r 303 (309)
..+.. +.+..++.+.. +++ +.+...+|.+|+++ | | +... .+.+.+.+.++++.
T Consensus 295 ~~~~~~~~~~~~~~~~~---------l~~---~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~ 352 (657)
T PRK07201 295 RRLRNAVATQLGIPPEV---------LDF---VNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWE 352 (657)
T ss_pred hHHHHHHHHhcCCCHHH---------HHh---ccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHH
Confidence 11111 22333333211 111 13467899999986 6 4 4333 57788888887553
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-25 Score=200.26 Aligned_cols=224 Identities=13% Similarity=0.055 Sum_probs=150.4
Q ss_pred CCCCccEEEEeecccCC-------ChHHHHHhHHHHHHHHHHHhCcCCCCC--ceEEEEeCCccccCCccccCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP-------TEAENCEVNGAMLRNVLRSVIPNAPNL--RHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v--~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.+.++|+|||+|+.... .+++++++|+.+|+|++++|+++ ++ ++|++.||..+||.. ...
T Consensus 54 ~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~i~~S~~~~yg~~---------~~~ 122 (292)
T TIGR01777 54 ALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA--EQKPKVFISASAVGYYGTS---------EDR 122 (292)
T ss_pred hcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc--CCCceEEEEeeeEEEeCCC---------CCC
Confidence 45689999999984321 23568899999999999999987 45 357777777889853 245
Q ss_pred CCCCCCCCCCcccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 80 PFTEDLPRLNVTNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 80 p~~E~~p~~p~p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
|++|+.++.|. .+|. .|..+.. .. ..+ ++++|+||++||||+++. .+.... .+....+.+
T Consensus 123 ~~~E~~~~~~~--~~~~~~~~~~e~~~~~-~~-~~~---~~~~ilR~~~v~G~~~~~-~~~~~~-----~~~~~~~~~-- 187 (292)
T TIGR01777 123 VFTEEDSPAGD--DFLAELCRDWEEAAQA-AE-DLG---TRVVLLRTGIVLGPKGGA-LAKMLP-----PFRLGLGGP-- 187 (292)
T ss_pred CcCcccCCCCC--ChHHHHHHHHHHHhhh-ch-hcC---CceEEEeeeeEECCCcch-hHHHHH-----HHhcCcccc--
Confidence 78999854332 2232 2333322 22 246 999999999999997532 221110 111111222
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHh
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMR 234 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~ 234 (309)
.|++. +.++++|++|+|+++.+++.++.. +++||+++++.+|+.|+.+.|++.+|.+...+ .|.+.++.+.
T Consensus 188 -~g~~~---~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~----~p~~~~~~~~ 258 (292)
T TIGR01777 188 -LGSGR---QWFSWIHIEDLVQLILFALENASI-SGPVNATAPEPVRNKEFAKALARALHRPAFFP----VPAFVLRALL 258 (292)
T ss_pred -cCCCC---cccccEeHHHHHHHHHHHhcCccc-CCceEecCCCccCHHHHHHHHHHHhCCCCcCc----CCHHHHHHHh
Confidence 36666 679999999999999998876543 56999999999999999999999999653321 3333222211
Q ss_pred ccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcC-ChHHHH
Q 045430 235 GKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFR-NSKNSF 295 (309)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~-~~~~gl 295 (309)
. . .+..+ ..++.++.+|+|++||+|++ +++|++
T Consensus 259 ~------~-------~~~~~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 259 G------E-------MADLL---------------LKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred c------h-------hhHHH---------------hCCcccccHHHHhcCCeeeCcChhhcC
Confidence 0 0 00000 12567899999999999999 588764
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.3e-24 Score=187.65 Aligned_cols=171 Identities=20% Similarity=0.256 Sum_probs=129.2
Q ss_pred HHHhccCCCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
+++.+++. ++|+|||+|+... .+..++++.|+.+++|++++|++. +++|||++||..+||.. .
T Consensus 57 ~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~sS~~~y~~~---------~ 124 (236)
T PF01370_consen 57 LEKLLEKA-NIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA--GVKRFIFLSSASVYGDP---------D 124 (236)
T ss_dssp HHHHHHHH-TESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH--TTSEEEEEEEGGGGTSS---------S
T ss_pred cccccccc-CceEEEEeeccccccccccccccccccccccccccccccccc--ccccccccccccccccc---------c
Confidence 34444443 6799999998531 266789999999999999999988 57999999999999964 2
Q ss_pred CCCCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceeccc-CCCcchhHHHHHHHHHHHhHhCCce
Q 045430 78 DTPFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFS-PYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~-~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
..|++|+++..|. + .+|...|+++.++..+ .+ ++++++||++||||+ +......+.. .+...+ ..|.++
T Consensus 125 ~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~-~~---~~~~~~R~~~vyG~~~~~~~~~~~~~-~~~~~~--~~~~~~ 197 (236)
T PF01370_consen 125 GEPIDEDSPINPLSPYGASKRAAEELLRDYAKK-YG---LRVTILRPPNVYGPGNPNNNSSSFLP-SLIRQA--LKGKPI 197 (236)
T ss_dssp SSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHH-HT---SEEEEEEESEEESTTSSSSSTSSHHH-HHHHHH--HTTSSE
T ss_pred ccccccccccccccccccccccccccccccccc-cc---cccccccccccccccccccccccccc-hhhHHh--hcCCcc
Confidence 5689999987544 2 3345566677766664 57 999999999999999 1111121111 122222 247788
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeec
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCS 195 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~ 195 (309)
.++|++. +.++++|++|+|+++++++.++.+.|++|||+
T Consensus 198 ~~~~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 198 KIPGDGS---QVRDFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp EEESTSS---CEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred cccCCCC---CccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 8999988 77999999999999999999877789999996
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.6e-23 Score=201.13 Aligned_cols=194 Identities=11% Similarity=0.041 Sum_probs=133.0
Q ss_pred CCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC----
Q 045430 11 TDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED---- 84 (309)
Q Consensus 11 ~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~---- 84 (309)
+++|+|||+|+.. ..++++..++|+.||+||+++|++.. +++||||+||..|||...+...+ ...|..++
T Consensus 111 ~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~k~~V~vST~~vyG~~~~~i~E---~~~~~~~~~~~~ 186 (491)
T PLN02996 111 KEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCV-KVKMLLHVSTAYVCGEKSGLILE---KPFHMGETLNGN 186 (491)
T ss_pred hCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEEeeeEEecCCCceeee---ecCCCccccccc
Confidence 4789999999843 33678899999999999999998753 68999999999999864211100 01110010
Q ss_pred -----------------------C---------------C--CCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCC
Q 045430 85 -----------------------L---------------P--RLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPH 122 (309)
Q Consensus 85 -----------------------~---------------p--~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~ 122 (309)
. + ..+.|++ |+.+|.++|.... ..+ +|++|+||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~-Y~~TK~~aE~lv~~~~~~---lpv~i~RP~ 262 (491)
T PLN02996 187 RKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNT-YVFTKAMGEMLLGNFKEN---LPLVIIRPT 262 (491)
T ss_pred ccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCc-hHhhHHHHHHHHHHhcCC---CCEEEECCC
Confidence 0 0 0111332 6655555554432 136 999999999
Q ss_pred ceecccCCCcchhH----HHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--C-CCCcceeec
Q 045430 123 IIFGFSPYSMMNVV----GTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--Y-ARNEAFNCS 195 (309)
Q Consensus 123 ~VyGp~~~~~~~~~----~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~-a~g~~fNI~ 195 (309)
+||||+.......+ ..-++...+ ..|....++|++. +.+|+++|||+|+|++.++..+ . ..+++|||+
T Consensus 263 ~V~G~~~~p~~gwi~~~~~~~~i~~~~--~~g~~~~~~gdg~---~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~ 337 (491)
T PLN02996 263 MITSTYKEPFPGWIEGLRTIDSVIVGY--GKGKLTCFLADPN---SVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVG 337 (491)
T ss_pred EeccCCcCCCCCcccchhhHHHHHHHh--ccceEeEEecCCC---eecceecccHHHHHHHHHHHHhhccCCCCcEEEec
Confidence 99999763322111 111222222 2366667889988 7899999999999999988642 2 246899999
Q ss_pred CC--CcccHHHHHHHHHHHhcccc
Q 045430 196 NG--DVFKWKHLWKVLAEQFEIEN 217 (309)
Q Consensus 196 ~g--~~~s~~el~~~i~~~~G~~~ 217 (309)
+| .++||.|+.+.+.++++..+
T Consensus 338 s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 338 SSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred CCCCCcccHHHHHHHHHHHhhhCC
Confidence 98 88999999999999998543
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=192.93 Aligned_cols=184 Identities=12% Similarity=0.087 Sum_probs=126.9
Q ss_pred CCCccEEEEeeccc-CC----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCC--ccccCCccccCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS-RP----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGG--KHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-~~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~--~vYG~~~~~~~~~~~~~~p~~ 82 (309)
++++|.|||+|+.. .. ....+.++|+.+|.|++++|++.. +++||||+||. .+||..... . .+.+++
T Consensus 126 i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~~vyg~~~~~-~----~~~~i~ 199 (367)
T PLN02686 126 FDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLACVWRQNYPH-D----LPPVID 199 (367)
T ss_pred HHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHHhcccccCCC-C----CCcccC
Confidence 34689999999842 21 224577899999999999998753 69999999996 478742000 0 013467
Q ss_pred CCCCCC---Cc-c-----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 83 EDLPRL---NV-T-----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 83 E~~p~~---p~-p-----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
|+.+.. +. | .+|+..|+++..++.. .+ ++++++||++||||++....... +...+ .|. +
T Consensus 200 E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~g---l~~v~lRp~~vyGp~~~~~~~~~----~~~~~---~g~-~ 267 (367)
T PLN02686 200 EESWSDESFCRDNKLWYALGKLKAEKAAWRAARG-KG---LKLATICPALVTGPGFFRRNSTA----TIAYL---KGA-Q 267 (367)
T ss_pred CCCCCChhhcccccchHHHHHHHHHHHHHHHHHh-cC---ceEEEEcCCceECCCCCCCCChh----HHHHh---cCC-C
Confidence 765321 11 2 2345566666666553 57 99999999999999864221111 11111 232 4
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHHHHHHHHHHhcccc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKHLWKVLAEQFEIEN 217 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~ 217 (309)
++.|++. .+++||+|+|+++++++..+ ...|++| |++|+.+|+.|+++.|++.+|.+.
T Consensus 268 ~~~g~g~-----~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~ 327 (367)
T PLN02686 268 EMLADGL-----LATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPI 327 (367)
T ss_pred ccCCCCC-----cCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCC
Confidence 5667654 46999999999999988742 3457788 888899999999999999999654
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=174.41 Aligned_cols=234 Identities=15% Similarity=0.076 Sum_probs=175.2
Q ss_pred CCccEEEEeeccc------CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS------RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 11 ~~vd~V~H~A~~~------~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
+.-+||+|+|+.. ...+-+|+++|+..--|+|..|-++ +++++|++-|+-+|-.. ...|++|+
T Consensus 54 ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~--gv~K~vsclStCIfPdk---------t~yPIdEt 122 (315)
T KOG1431|consen 54 EKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH--GVKKVVSCLSTCIFPDK---------TSYPIDET 122 (315)
T ss_pred cCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh--chhhhhhhcceeecCCC---------CCCCCCHH
Confidence 3568999999832 2366889999999999999999998 79999999999888431 37799999
Q ss_pred CCCC--Ccc-cchHHHHHHH-----HHHHHhcCCCcceeEEeecCCceecccCC-Cc-chhHHHHHHHHHH-HhHhCC-c
Q 045430 85 LPRL--NVT-NFYYTQEDIL-----FEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SM-MNVVGTLCVYAAI-CKHEGV-P 152 (309)
Q Consensus 85 ~p~~--p~p-~~~y~~e~~~-----~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~-~~~~~~~~i~~~l-~~~~g~-~ 152 (309)
+-.. |+| |+-|+--|.+ +.|.. ..| |.++.+-|.|||||.|+ |+ .+.+++--|+..- .+..|. +
T Consensus 123 mvh~gpphpsN~gYsyAKr~idv~n~aY~~-qhg---~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~ 198 (315)
T KOG1431|consen 123 MVHNGPPHPSNFGYSYAKRMIDVQNQAYRQ-QHG---RDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDE 198 (315)
T ss_pred HhccCCCCCCchHHHHHHHHHHHHHHHHHH-HhC---CceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCce
Confidence 8443 224 6667755522 33434 378 99999999999999884 32 2333332222211 122355 7
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCC--cccHHHHHHHHHHHhccccCCCCCCCCCCCHH
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGD--VFKWKHLWKVLAEQFEIENYGLPQDGERVRLE 230 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~--~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~ 230 (309)
++..|+|. -+|.|+|++|||+++||.+..- ..-|.-|++.|+ ++|++|+.+.+.+.+|..+...
T Consensus 199 ~~VwGsG~---PlRqFiys~DLA~l~i~vlr~Y-~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~---------- 264 (315)
T KOG1431|consen 199 LTVWGSGS---PLRQFIYSDDLADLFIWVLREY-EGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV---------- 264 (315)
T ss_pred EEEecCCC---hHHHHhhHhHHHHHHHHHHHhh-cCccceEeccCccceeEHHHHHHHHHHHhCCCceEE----------
Confidence 88999998 7799999999999999998752 234789999888 8999999999999999887632
Q ss_pred HHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCC-hHHHHHHHHHHHHH
Q 045430 231 EIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRN-SKNSFVNWIDKMKT 304 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~-~~~gl~~t~~~~r~ 304 (309)
|=.. .++ .++.-+.|.+|+|++||+++.+ +++|+.+|++||-+
T Consensus 265 -~Dtt---------------K~D---------------Gq~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~ 308 (315)
T KOG1431|consen 265 -WDTT---------------KSD---------------GQFKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLD 308 (315)
T ss_pred -eecc---------------CCC---------------CCcccccchHHHHHhCCCcccChHHHHHHHHHHHHHH
Confidence 0000 011 0235578999999999999998 99999999999965
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-22 Score=205.25 Aligned_cols=200 Identities=16% Similarity=0.196 Sum_probs=140.8
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++++|+|||+|+.... ..++|+.||.|++++|++. +++|||++||..
T Consensus 59 l~~vD~VVHlAa~~~~----~~~vNv~GT~nLLeAa~~~--gvkr~V~iSS~~--------------------------- 105 (854)
T PRK05865 59 MTGADVVAHCAWVRGR----NDHINIDGTANVLKAMAET--GTGRIVFTSSGH--------------------------- 105 (854)
T ss_pred HhCCCEEEECCCcccc----hHHHHHHHHHHHHHHHHHc--CCCeEEEECCcH---------------------------
Confidence 3468999999985432 5789999999999999987 689999999841
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
|...|+++.+ .+ ++++|+||++||||+..+.+ .+....++...|++. +.+|++
T Consensus 106 ----K~aaE~ll~~-----~g---l~~vILRp~~VYGP~~~~~i------------~~ll~~~v~~~G~~~---~~~dfI 158 (854)
T PRK05865 106 ----QPRVEQMLAD-----CG---LEWVAVRCALIFGRNVDNWV------------QRLFALPVLPAGYAD---RVVQVV 158 (854)
T ss_pred ----HHHHHHHHHH-----cC---CCEEEEEeceEeCCChHHHH------------HHHhcCceeccCCCC---ceEeee
Confidence 4566776642 47 99999999999999732211 111122333334444 567999
Q ss_pred CHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCC
Q 045430 170 DADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQL 249 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 249 (309)
|++|+|++++.++..+...+++|||++++.+|++|+.+.+.+... + .+.+......... . +
T Consensus 159 hVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~-----~----v~~~~~~~~~~~~----~------~ 219 (854)
T PRK05865 159 HSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMV-----P----IGSPVLRRVTSFA----E------L 219 (854)
T ss_pred eHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhhc-----c----CCchhhhhccchh----h------h
Confidence 999999999888865555678999999999999999998866431 0 1111110000000 0 0
Q ss_pred CcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 250 QLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
... .....+|++|+++ +||+|++++++|++++++|||.+
T Consensus 220 --~~~---------------~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 220 --ELL---------------HSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred --hcc---------------cCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 000 0133689999987 69999999999999999999863
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-21 Score=179.76 Aligned_cols=235 Identities=10% Similarity=0.023 Sum_probs=153.0
Q ss_pred CCCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
.++|+|+|||+++....++..+.++|+.|+.|+++||+++ +++||||+||..++... ..
T Consensus 61 al~g~d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~--gvkr~I~~Ss~~~~~~~----------~~--------- 119 (317)
T CHL00194 61 SFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAA--KIKRFIFFSILNAEQYP----------YI--------- 119 (317)
T ss_pred HHCCCCEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHc--CCCEEEEeccccccccC----------CC---------
Confidence 4567899999987444455678999999999999999987 79999999995332110 10
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceec
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA 168 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~ 168 (309)
|...+|+..|++++ ..+ ++|||+||+.+|+...... .. .+. .+.++.+.|. . +.+++
T Consensus 120 ~~~~~K~~~e~~l~-----~~~---l~~tilRp~~~~~~~~~~~---~~------~~~--~~~~~~~~~~-~---~~~~~ 176 (317)
T CHL00194 120 PLMKLKSDIEQKLK-----KSG---IPYTIFRLAGFFQGLISQY---AI------PIL--EKQPIWITNE-S---TPISY 176 (317)
T ss_pred hHHHHHHHHHHHHH-----HcC---CCeEEEeecHHhhhhhhhh---hh------hhc--cCCceEecCC-C---CccCc
Confidence 11123555666553 257 9999999998886311100 00 011 1345444333 3 55799
Q ss_pred cCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhC
Q 045430 169 SDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQ 248 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (309)
+|++|+|++++.++..+...|++|||++++.+|++|+.+.+++.+|.+... ...|.++.+.... |.. ..+
T Consensus 177 i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~---~~vp~~~~~~~~~----~~~---~~~ 246 (317)
T CHL00194 177 IDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKI---SRVPLFLLKLLRQ----ITG---FFE 246 (317)
T ss_pred cCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeE---EeCCHHHHHHHHH----HHh---hcc
Confidence 999999999998887776779999999999999999999999999986432 2245444433321 111 111
Q ss_pred CCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCc--CChHHHHHHHHHH
Q 045430 249 LQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGF--RNSKNSFVNWIDK 301 (309)
Q Consensus 249 l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~--~~~~~gl~~t~~~ 301 (309)
+. .+... ..-...++.+.-+..++.+++++ +|+.|. .+++++++++++.
T Consensus 247 ~~-~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 298 (317)
T CHL00194 247 WT-WNISD---RLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFER 298 (317)
T ss_pred cc-hhhHH---HHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHH
Confidence 11 11111 00011223333345568889987 599994 6899998888864
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-22 Score=183.27 Aligned_cols=226 Identities=12% Similarity=0.081 Sum_probs=147.2
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
..|+|||||+.+.. ++++.+++|+.++.++.++|.+. + -|+||+||..||++. ...|.+|+++
T Consensus 51 ~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~-~~li~~STd~VFdG~---------~~~~y~E~d~ 118 (286)
T PF04321_consen 51 KPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER--G-ARLIHISTDYVFDGD---------KGGPYTEDDP 118 (286)
T ss_dssp --SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T--EEEEEEEGGGS-SS---------TSSSB-TTS-
T ss_pred CCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc--C-CcEEEeeccEEEcCC---------cccccccCCC
Confidence 47999999986543 77889999999999999999987 4 489999999999653 2668999998
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
+. |.+.|+..|+..|...+... -.++|+|++.|||+...++...+. ..+ ..|.++....+ +.+
T Consensus 119 ~~--P~~~YG~~K~~~E~~v~~~~---~~~~IlR~~~~~g~~~~~~~~~~~-----~~~--~~~~~i~~~~d-----~~~ 181 (286)
T PF04321_consen 119 PN--PLNVYGRSKLEGEQAVRAAC---PNALILRTSWVYGPSGRNFLRWLL-----RRL--RQGEPIKLFDD-----QYR 181 (286)
T ss_dssp -----SSHHHHHHHHHHHHHHHH----SSEEEEEE-SEESSSSSSHHHHHH-----HHH--HCTSEEEEESS-----CEE
T ss_pred CC--CCCHHHHHHHHHHHHHHHhc---CCEEEEecceecccCCCchhhhHH-----HHH--hcCCeeEeeCC-----cee
Confidence 55 55779988888887754323 478999999999996666654332 122 24677777666 668
Q ss_pred eccCHHHHHHHHHHHhcCCC---CCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHH
Q 045430 167 VASDADLIAEQHIWAAVDPY---ARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQI 243 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~---a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
+.++++|+|++++.++.... ....+||+++++.+|+.|+...|++.+|.....+ .|.+... +.
T Consensus 182 ~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i----~~~~~~~-~~--------- 247 (286)
T PF04321_consen 182 SPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELI----KPVSSSE-FP--------- 247 (286)
T ss_dssp --EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEE----EEESSTT-ST---------
T ss_pred CCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceE----Eeccccc-CC---------
Confidence 99999999999998887532 2357999999999999999999999999886432 1111100 00
Q ss_pred HHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhc-CCCCcCChHHHHHHHHHHH
Q 045430 244 VKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEH-GFLGFRNSKNSFVNWIDKM 302 (309)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~l-Gf~p~~~~~~gl~~t~~~~ 302 (309)
.... .+.+..+|++|++++ |+++. +.++++++.++.|
T Consensus 248 --------~~~~-------------rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 248 --------RAAP-------------RPRNTSLDCRKLKNLLGIKPP-PWREGLEELVKQY 285 (286)
T ss_dssp --------TSSG-------------S-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred --------CCCC-------------CCCcccccHHHHHHccCCCCc-CHHHHHHHHHHHh
Confidence 0000 123668999999985 99986 8999999998865
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=171.92 Aligned_cols=241 Identities=16% Similarity=0.139 Sum_probs=161.9
Q ss_pred cCCCCccEEEEeecc-cC--C-ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWA-SR--P-TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~-~~--~-~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
++++|||.|||+|.. .. . ++.+.++.+|.||.|+|+||++.+ .||||||+||.++-...-...+ .+..++|
T Consensus 74 ~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~~~~~~----~~~vvdE 148 (327)
T KOG1502|consen 74 KAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYNGPNIG----ENSVVDE 148 (327)
T ss_pred HHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccCCcCCC----CCccccc
Confidence 356789999999983 22 2 344799999999999999999985 7999999999887754201111 3557888
Q ss_pred CCCCCCcc---------cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 84 DLPRLNVT---------NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 84 ~~p~~p~p---------~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
++=-.+.- .+|--+|+.+.+++.+ .+ ++.+.+-|+.|+||......+.. +....++ ..|..-.
T Consensus 149 ~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e-~~---~~lv~inP~lV~GP~l~~~l~~s--~~~~l~~--i~G~~~~ 220 (327)
T KOG1502|consen 149 ESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE-NG---LDLVTINPGLVFGPGLQPSLNSS--LNALLKL--IKGLAET 220 (327)
T ss_pred ccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh-CC---ccEEEecCCceECCCcccccchh--HHHHHHH--Hhccccc
Confidence 87432221 2233377777778775 57 99999999999999875422211 1111121 1243222
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHh
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMR 234 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~ 234 (309)
+++. ...+++|+|+|+|+++|.+.|.+.| .|.+.++. .++.|+.+.+.+.+-.... | .. -+
T Consensus 221 ~~n~------~~~~VdVrDVA~AHv~a~E~~~a~G-Ryic~~~~-~~~~ei~~~l~~~~P~~~i-p------~~----~~ 281 (327)
T KOG1502|consen 221 YPNF------WLAFVDVRDVALAHVLALEKPSAKG-RYICVGEV-VSIKEIADILRELFPDYPI-P------KK----NA 281 (327)
T ss_pred CCCC------ceeeEeHHHHHHHHHHHHcCcccCc-eEEEecCc-ccHHHHHHHHHHhCCCCCC-C------CC----CC
Confidence 3222 2458999999999999999987765 56666544 4488888888766543221 1 00 00
Q ss_pred ccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCCC
Q 045430 235 GKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309 (309)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~iP 309 (309)
+ -..+.+ ....+|.+|++++||....+++|.+.++++++++.|.++
T Consensus 282 ---~----------~~~~~~----------------~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l~ 327 (327)
T KOG1502|consen 282 ---E----------EHEGFL----------------TSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGLLL 327 (327)
T ss_pred ---c----------cccccc----------------cccccccHHHHhcccceecChHHHHHHHHHHHHHhcCCC
Confidence 0 000111 022579999999987777799999999999999999874
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=175.00 Aligned_cols=204 Identities=14% Similarity=0.089 Sum_probs=139.8
Q ss_pred CCccEEEEeeccc-CC----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-RP----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+.. .+ ++.+++++|+.||.|++++|.+. +++|||++||...+ .|.
T Consensus 73 ~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~--~~~~iV~~SS~~~~--------------~p~---- 132 (324)
T TIGR03589 73 RGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN--GVKRVVALSTDKAA--------------NPI---- 132 (324)
T ss_pred hcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCCC--------------CCC----
Confidence 4689999999842 22 56678999999999999999986 68999999996321 111
Q ss_pred CCCCcccchHHHHHHHHHHHH--hcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC-ceeecCCcccc
Q 045430 86 PRLNVTNFYYTQEDILFEEVE--KRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV-PLLFPGSKDCW 162 (309)
Q Consensus 86 p~~p~p~~~y~~e~~~~~~~~--~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~-~~~~~G~~~~~ 162 (309)
.+-..+|+..|.+++.+.. ...+ ++++++||++||||+. +..+ .+....+ .|. ++++. ++.
T Consensus 133 --~~Y~~sK~~~E~l~~~~~~~~~~~g---i~~~~lR~g~v~G~~~-~~i~------~~~~~~~-~~~~~~~i~-~~~-- 196 (324)
T TIGR03589 133 --NLYGATKLASDKLFVAANNISGSKG---TRFSVVRYGNVVGSRG-SVVP------FFKSLKE-EGVTELPIT-DPR-- 196 (324)
T ss_pred --CHHHHHHHHHHHHHHHHHhhccccC---cEEEEEeecceeCCCC-CcHH------HHHHHHH-hCCCCeeeC-CCC--
Confidence 0101446666666654322 1357 9999999999999874 3222 2222212 344 46654 444
Q ss_pred ccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHH
Q 045430 163 EGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQ 242 (309)
Q Consensus 163 ~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+.|+++||+|+|++++.++.+. ..|++|| +.+..+|+.|+.+.+.+.++......
T Consensus 197 -~~r~~i~v~D~a~a~~~al~~~-~~~~~~~-~~~~~~sv~el~~~i~~~~~~~~~~~---------------------- 251 (324)
T TIGR03589 197 -MTRFWITLEQGVNFVLKSLERM-LGGEIFV-PKIPSMKITDLAEAMAPECPHKIVGI---------------------- 251 (324)
T ss_pred -ceEeeEEHHHHHHHHHHHHhhC-CCCCEEc-cCCCcEEHHHHHHHHHhhCCeeEeCC----------------------
Confidence 6799999999999999988753 3578884 66778999999999988643221100
Q ss_pred HHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHH
Q 045430 243 IVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVN 297 (309)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~ 297 (309)
.++... .....|++|+++ +||.|++++++++..
T Consensus 252 -------~~g~~~---------------~~~~~~~~~~~~~lg~~~~~~l~~~~~~ 285 (324)
T TIGR03589 252 -------RPGEKL---------------HEVMITEDDARHTYELGDYYAILPSISF 285 (324)
T ss_pred -------CCCchh---------------HhhhcChhhhhhhcCCCCeEEEcccccc
Confidence 011100 123579999987 699999999999863
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-18 Score=163.54 Aligned_cols=183 Identities=17% Similarity=0.121 Sum_probs=124.1
Q ss_pred CCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 11 ~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
+++|+|||+|+.. ..+.+++.++|+.||.+++++|.+. ++++|+|+||.++|+.. ...+..|+.+..
T Consensus 87 ~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~--~~~~~v~iSS~~v~~~~---------~~~~~~~~~~~~ 155 (367)
T TIGR01746 87 ENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG--RAKPLHYVSTISVLAAI---------DLSTVTEDDAIV 155 (367)
T ss_pred hhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC--CCceEEEEccccccCCc---------CCCCcccccccc
Confidence 5789999999843 2366778899999999999999886 68899999999999853 122344554432
Q ss_pred Cc---c-----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHH-HHHHHHHhHhCCceeecCCc
Q 045430 89 NV---T-----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTL-CVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 89 p~---p-----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~-~i~~~l~~~~g~~~~~~G~~ 159 (309)
+. + .+|+..|.++.+... .+ ++++++||+.|||+......+....+ .+.... ...+. ++...
T Consensus 156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~--~g---~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~-~~~~~---~p~~~ 226 (367)
T TIGR01746 156 TPPPGLAGGYAQSKWVAELLVREASD--RG---LPVTIVRPGRILGNSYTGAINSSDILWRMVKGC-LALGA---YPDSP 226 (367)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHh--cC---CCEEEECCCceeecCCCCCCCchhHHHHHHHHH-HHhCC---CCCCC
Confidence 21 1 234445555554433 37 99999999999998442211111101 111111 11221 22221
Q ss_pred cccccceeccCHHHHHHHHHHHhcCCCC--CCcceeecCCCcccHHHHHHHHHHHhcccc
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVDPYA--RNEAFNCSNGDVFKWKHLWKVLAEQFEIEN 217 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~~~a--~g~~fNI~~g~~~s~~el~~~i~~~~G~~~ 217 (309)
. ...+++++||++++++.++..+.. .|++|||++++++||.|+++.+++ +|.+.
T Consensus 227 ~---~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~ 282 (367)
T TIGR01746 227 E---LTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL 282 (367)
T ss_pred c---cccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence 1 246899999999999988876543 289999999999999999999998 88654
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-19 Score=158.19 Aligned_cols=224 Identities=12% Similarity=0.108 Sum_probs=164.4
Q ss_pred CccEEEEeeccc-CC----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS-RP----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~-~~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
.-|.|+|+|+.. .+ +++.-+.+|..|..|+.++|++. | -++||+||--|+.+. ...|.+|+++
T Consensus 50 ~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--g-a~lVhiSTDyVFDG~---------~~~~Y~E~D~ 117 (281)
T COG1091 50 RPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV--G-ARLVHISTDYVFDGE---------KGGPYKETDT 117 (281)
T ss_pred CCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh--C-CeEEEeecceEecCC---------CCCCCCCCCC
Confidence 469999999843 22 55668899999999999999998 4 479999999888543 2578999998
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
++ |..+|+++|++-|.+.+..+ -..+|+|.++|||...+|+...+ ..+. ..|.++...-+ |..
T Consensus 118 ~~--P~nvYG~sKl~GE~~v~~~~---~~~~I~Rtswv~g~~g~nFv~tm------l~la-~~~~~l~vv~D-----q~g 180 (281)
T COG1091 118 PN--PLNVYGRSKLAGEEAVRAAG---PRHLILRTSWVYGEYGNNFVKTM------LRLA-KEGKELKVVDD-----QYG 180 (281)
T ss_pred CC--ChhhhhHHHHHHHHHHHHhC---CCEEEEEeeeeecCCCCCHHHHH------HHHh-hcCCceEEECC-----eee
Confidence 65 55689999999998875555 67899999999999776664221 1222 24677776555 778
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHH
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKE 246 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (309)
+.+|+.|+|+++..++... ..+.+|++++...+||-|+...|.+.+|..+... .|.... +
T Consensus 181 sPt~~~dlA~~i~~ll~~~-~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~----~~~~~~---~------------ 240 (281)
T COG1091 181 SPTYTEDLADAILELLEKE-KEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVI----EPIASA---E------------ 240 (281)
T ss_pred CCccHHHHHHHHHHHHhcc-ccCcEEEEeCCCcccHHHHHHHHHHHhCCCcccc----cccccc---c------------
Confidence 9999999999988877654 3334999999888999999999999999776422 111110 0
Q ss_pred hCCCcccccccchhhHHHHHhhcccccccChhhHHhc-CCCCcCChHHHHHHHHHH
Q 045430 247 NQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEH-GFLGFRNSKNSFVNWIDK 301 (309)
Q Consensus 247 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~l-Gf~p~~~~~~gl~~t~~~ 301 (309)
+ +.+..| +.+..+|+.|+.+. |+++. +-++++...++.
T Consensus 241 ~---~~~a~R-------------P~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~ 279 (281)
T COG1091 241 Y---PTPAKR-------------PANSSLDTKKLEKAFGLSLP-EWREALKALLDE 279 (281)
T ss_pred c---CccCCC-------------CcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence 0 112222 23557899999885 87776 677777665543
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.6e-19 Score=161.48 Aligned_cols=230 Identities=13% Similarity=0.009 Sum_probs=148.4
Q ss_pred CccEEEEeecccC--------CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR--------PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 12 ~vd~V~H~A~~~~--------~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
++|+|||+|+... .++.+++++|+.||.||+++|++. +++ +++.||..+||....+.. ....|++|
T Consensus 57 ~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~--gv~-~v~~sS~~vy~~~~~~p~---~~~~~~~E 130 (298)
T PLN02778 57 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER--GLV-LTNYATGCIFEYDDAHPL---GSGIGFKE 130 (298)
T ss_pred CCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCC-EEEEecceEeCCCCCCCc---ccCCCCCc
Confidence 6899999998431 256779999999999999999987 676 456677789874200000 01235888
Q ss_pred CCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccc
Q 045430 84 DLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWE 163 (309)
Q Consensus 84 ~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~ 163 (309)
++++.+ |.+.|+..|++.|..... - -...++|+..++|++.....+ +...+. .+.++...+
T Consensus 131 e~~p~~-~~s~Yg~sK~~~E~~~~~-y---~~~~~lr~~~~~~~~~~~~~~------fi~~~~--~~~~~~~~~------ 191 (298)
T PLN02778 131 EDTPNF-TGSFYSKTKAMVEELLKN-Y---ENVCTLRVRMPISSDLSNPRN------FITKIT--RYEKVVNIP------ 191 (298)
T ss_pred CCCCCC-CCCchHHHHHHHHHHHHH-h---hccEEeeecccCCcccccHHH------HHHHHH--cCCCeeEcC------
Confidence 776432 345688888888876532 2 356899999989976432111 111221 244433322
Q ss_pred cceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHH
Q 045430 164 GYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQI 243 (309)
Q Consensus 164 ~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
.+++|++|+++|++.++..+ . +++|||++++.+|+.|+.+.|++.+|..-. . ..+.+. . .+
T Consensus 192 --~s~~yv~D~v~al~~~l~~~-~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~-~----~~~~i~---~--~~----- 252 (298)
T PLN02778 192 --NSMTILDELLPISIEMAKRN-L-TGIYNFTNPGVVSHNEILEMYRDYIDPSFT-W----KNFTLE---E--QA----- 252 (298)
T ss_pred --CCCEEHHHHHHHHHHHHhCC-C-CCeEEeCCCCcccHHHHHHHHHHHhCCCce-e----ccccHH---H--HH-----
Confidence 37889999999988877543 2 469999999999999999999999995421 0 111111 0 00
Q ss_pred HHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhc-CCCCcCChHHHHHHHHHHHHHCC
Q 045430 244 VKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEH-GFLGFRNSKNSFVNWIDKMKTYR 306 (309)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~l-Gf~p~~~~~~gl~~t~~~~r~~~ 306 (309)
+ .....+ .+..+|.+|++++ +=.+. +.+++++..++.||+.+
T Consensus 253 -~-----~~~~~~--------------~~~~Ld~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 295 (298)
T PLN02778 253 -K-----VIVAPR--------------SNNELDTTKLKREFPELLP-IKESLIKYVFEPNKKTK 295 (298)
T ss_pred -H-----HHhCCC--------------ccccccHHHHHHhcccccc-hHHHHHHHHHHHHHhhh
Confidence 0 001111 1235899999985 53232 56799999999886643
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.1e-19 Score=162.56 Aligned_cols=178 Identities=13% Similarity=0.062 Sum_probs=121.8
Q ss_pred CCCCccEEEEeecccCC---ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
.+.++|.|||+++.... ++++.+++|+.||.|++++|.+.. +++|||++||..+|+.. ... .....|++|+.
T Consensus 75 ~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~~~--~~~--~~~~~~~~E~~ 149 (297)
T PLN02583 75 ALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVIWR--DDN--ISTQKDVDERS 149 (297)
T ss_pred HHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHheecc--ccc--CCCCCCCCccc
Confidence 34568999998763222 356789999999999999998753 58999999999876411 000 00244788987
Q ss_pred CCCCc----c-----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 86 PRLNV----T-----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 86 p~~p~----p-----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
+..+. + .+|+.+|+++.+++.+ .+ +++++|||++||||+...... .+ .+.+ ...
T Consensus 150 ~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~-~g---i~~v~lrp~~v~Gp~~~~~~~---------~~---~~~~-~~~ 212 (297)
T PLN02583 150 WSDQNFCRKFKLWHALAKTLSEKTAWALAMD-RG---VNMVSINAGLLMGPSLTQHNP---------YL---KGAA-QMY 212 (297)
T ss_pred CCCHHHHhhcccHHHHHHHHHHHHHHHHHHH-hC---CcEEEEcCCcccCCCCCCchh---------hh---cCCc-ccC
Confidence 64322 1 1234455555555443 57 999999999999998642211 01 1222 222
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFE 214 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G 214 (309)
+++ ..+++||+|+|+++++|++++.+.| .|+++++....+.++.+.+.+.+.
T Consensus 213 ~~~-----~~~~v~V~Dva~a~~~al~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p 264 (297)
T PLN02583 213 ENG-----VLVTVDVNFLVDAHIRAFEDVSSYG-RYLCFNHIVNTEEDAVKLAQMLSP 264 (297)
T ss_pred ccc-----CcceEEHHHHHHHHHHHhcCcccCC-cEEEecCCCccHHHHHHHHHHhCC
Confidence 332 2468999999999999998776655 799998877778889998888766
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-18 Score=169.93 Aligned_cols=186 Identities=12% Similarity=0.092 Sum_probs=129.0
Q ss_pred CCccEEEEeecc-c-CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCC-----
Q 045430 11 TDVTHIFYVTWA-S-RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE----- 83 (309)
Q Consensus 11 ~~vd~V~H~A~~-~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E----- 83 (309)
+++|+|||+|+. . ..++++..++|+.||+|++++|++.. ++++|||+||..|||...+.+.+. ..|..+
T Consensus 218 ~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~-~lk~fV~vSTayVyG~~~G~i~E~---~y~~~~~i~~~ 293 (605)
T PLN02503 218 KEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCK-KLKLFLQVSTAYVNGQRQGRIMEK---PFRMGDCIARE 293 (605)
T ss_pred hcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEEccCceeecCCCCeeeee---ecCcccccccc
Confidence 368999999994 3 33678899999999999999998753 689999999999999752222110 111000
Q ss_pred ---------------------------C---C----------------CCCCcccchHHHHHHHHHHHHh--cCCCccee
Q 045430 84 ---------------------------D---L----------------PRLNVTNFYYTQEDILFEEVEK--RKGPLSLT 115 (309)
Q Consensus 84 ---------------------------~---~----------------p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~ 115 (309)
. . -..+.||+ |..+|.++|.... ..+ +|
T Consensus 294 ~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNt-Yt~TK~lAE~lV~~~~~~---LP 369 (605)
T PLN02503 294 LGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDT-YVFTKAMGEMVINSMRGD---IP 369 (605)
T ss_pred cccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCCh-HHHHHHHHHHHHHHhcCC---CC
Confidence 0 0 00122454 7766766665542 135 99
Q ss_pred EEeecCCce----------ecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhc-C
Q 045430 116 WSVHRPHII----------FGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAV-D 184 (309)
Q Consensus 116 ~~ilRP~~V----------yGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~-~ 184 (309)
.+|+||+.| ||+++....+.+ ++. ..|.--.++|+++ ...|++.||++|++++.|+. +
T Consensus 370 v~IvRPsiV~st~~eP~pGw~d~~~~~~p~~----~~~----g~G~lr~~~~~~~---~~~DiVPVD~vvna~i~a~a~~ 438 (605)
T PLN02503 370 VVIIRPSVIESTWKDPFPGWMEGNRMMDPIV----LYY----GKGQLTGFLADPN---GVLDVVPADMVVNATLAAMAKH 438 (605)
T ss_pred EEEEcCCEecccccCCccccccCccccchhh----hhe----eccceeEEEeCCC---eeEeEEeecHHHHHHHHHHHhh
Confidence 999999999 776653222221 111 2354334778887 77999999999999998843 2
Q ss_pred C---CCCCcceeecCC--CcccHHHHHHHHHHHhcc
Q 045430 185 P---YARNEAFNCSNG--DVFKWKHLWKVLAEQFEI 215 (309)
Q Consensus 185 ~---~a~g~~fNI~~g--~~~s~~el~~~i~~~~G~ 215 (309)
. ...+++||++++ .+++|.++.+.+.+++..
T Consensus 439 ~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 439 GGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred hcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 2 234789999988 899999999999988774
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.9e-18 Score=162.41 Aligned_cols=172 Identities=13% Similarity=0.026 Sum_probs=125.1
Q ss_pred HHhccCCC-CccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCC
Q 045430 4 QAKLSKLT-DVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 4 ~~~~~~~~-~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~ 82 (309)
...+.++. ++|+||||++.......+.+++|+.++.|++++|++. +++|||++||..+|+. ..
T Consensus 127 ~~~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~--gv~r~V~iSS~~v~~p--------------~~ 190 (390)
T PLN02657 127 RKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREV--GAKHFVLLSAICVQKP--------------LL 190 (390)
T ss_pred HHHHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHc--CCCEEEEEeeccccCc--------------ch
Confidence 34444332 6899999987433334567899999999999999987 7999999999877642 11
Q ss_pred CCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcccc
Q 045430 83 EDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCW 162 (309)
Q Consensus 83 E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~ 162 (309)
+ ...+|...|+.+.+ . ..+ ++|+|+||+++||+... .+..+ ..|.++.++|+|.
T Consensus 191 ~------~~~sK~~~E~~l~~--~-~~g---l~~tIlRp~~~~~~~~~----------~~~~~--~~g~~~~~~GdG~-- 244 (390)
T PLN02657 191 E------FQRAKLKFEAELQA--L-DSD---FTYSIVRPTAFFKSLGG----------QVEIV--KDGGPYVMFGDGK-- 244 (390)
T ss_pred H------HHHHHHHHHHHHHh--c-cCC---CCEEEEccHHHhcccHH----------HHHhh--ccCCceEEecCCc--
Confidence 1 01235555665544 2 257 99999999999984211 11112 1367777788876
Q ss_pred ccce-eccCHHHHHHHHHHHhcCCCCCCcceeecCC-CcccHHHHHHHHHHHhccccC
Q 045430 163 EGYS-VASDADLIAEQHIWAAVDPYARNEAFNCSNG-DVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 163 ~~~~-~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g-~~~s~~el~~~i~~~~G~~~~ 218 (309)
..+ .++|++|+|++++.++..+...|++|||+++ +.+|+.|+.+.+++.+|.+..
T Consensus 245 -~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~ 301 (390)
T PLN02657 245 -LCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPK 301 (390)
T ss_pred -ccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence 333 5799999999999888776677899999985 689999999999999997643
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-16 Score=139.42 Aligned_cols=229 Identities=11% Similarity=0.071 Sum_probs=159.2
Q ss_pred CccEEEEeeccc--CC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS--RP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 12 ~vd~V~H~A~~~--~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
+||+|+++|+-+ .. ..++.++.=+..|+.|+|++.+...+.+.|+-.|-+..||.. ...+++|+
T Consensus 56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~---------~~~~~tE~ 126 (297)
T COG1090 56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHS---------GDRVVTEE 126 (297)
T ss_pred CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCC---------CceeeecC
Confidence 599999999932 22 335578999999999999998655467778888888899964 36689999
Q ss_pred CCCCCc-c-cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh-HhCCceeecCCccc
Q 045430 85 LPRLNV-T-NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK-HEGVPLLFPGSKDC 161 (309)
Q Consensus 85 ~p~~p~-p-~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~-~~g~~~~~~G~~~~ 161 (309)
+|.... . .--+.=|+...... ..+ ..+|++|.++|.|+.-+.+ ....+ +.+ ..|.+ .|+|.+
T Consensus 127 ~~~g~~Fla~lc~~WE~~a~~a~--~~g---tRvvllRtGvVLs~~GGaL-~~m~~------~fk~glGG~---~GsGrQ 191 (297)
T COG1090 127 SPPGDDFLAQLCQDWEEEALQAQ--QLG---TRVVLLRTGVVLSPDGGAL-GKMLP------LFKLGLGGK---LGSGRQ 191 (297)
T ss_pred CCCCCChHHHHHHHHHHHHhhhh--hcC---ceEEEEEEEEEecCCCcch-hhhcc------hhhhccCCc---cCCCCc
Confidence 764322 1 00122233333222 246 8999999999999865433 22221 222 34554 489996
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHH
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWE 241 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
| .+++++||++++++++.+++...| .||.+.+.|++.+++...|++.++++...+ +|-.+.+..-+
T Consensus 192 ~---~SWIhieD~v~~I~fll~~~~lsG-p~N~taP~PV~~~~F~~al~r~l~RP~~~~----vP~~~~rl~LG------ 257 (297)
T COG1090 192 W---FSWIHIEDLVNAILFLLENEQLSG-PFNLTAPNPVRNKEFAHALGRALHRPAILP----VPSFALRLLLG------ 257 (297)
T ss_pred e---eeeeeHHHHHHHHHHHHhCcCCCC-cccccCCCcCcHHHHHHHHHHHhCCCcccc----CcHHHHHHHhh------
Confidence 6 999999999999999998876655 999999999999999999999999776533 33222221110
Q ss_pred HHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcC-ChHHHHHHHHH
Q 045430 242 QIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFR-NSKNSFVNWID 300 (309)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~-~~~~gl~~t~~ 300 (309)
++.+.++. .+..=+.|+.+.||+-++ |+++++.+.++
T Consensus 258 -------------------e~a~~lL~---gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 258 -------------------EMADLLLG---GQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred -------------------hhHHHHhc---cchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 01111222 455667889899999777 78999988764
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.4e-15 Score=164.36 Aligned_cols=189 Identities=14% Similarity=0.084 Sum_probs=121.1
Q ss_pred CCccEEEEeecc-cC-CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCC-----CCCCCCCCC
Q 045430 11 TDVTHIFYVTWA-SR-PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKI-----RPHDTPFTE 83 (309)
Q Consensus 11 ~~vd~V~H~A~~-~~-~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~-----~~~~~p~~E 83 (309)
+++|+|||+|+. .. .+..++...|+.||+|++++|.+. ++++|+|+||.++||.. ..... .....++.|
T Consensus 1060 ~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~--~~~~~~~~~~~~~~~~~~e 1135 (1389)
T TIGR03443 1060 NEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTE--YYVNLSDELVQAGGAGIPE 1135 (1389)
T ss_pred hcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCcc--cccchhhhhhhccCCCCCc
Confidence 468999999984 32 255667789999999999999876 68999999999999742 10000 000113444
Q ss_pred CCCCCCc---c-----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 84 DLPRLNV---T-----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 84 ~~p~~p~---p-----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
+.+..+. + .+|+.+|.++.++.. .+ ++++|+||++|||++.....+....+.....-+...|.
T Consensus 1136 ~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~--~g---~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~---- 1206 (1389)
T TIGR03443 1136 SDDLMGSSKGLGTGYGQSKWVAEYIIREAGK--RG---LRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGL---- 1206 (1389)
T ss_pred ccccccccccCCCChHHHHHHHHHHHHHHHh--CC---CCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCC----
Confidence 4332211 1 234444555544332 47 99999999999999764322111111111111111222
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCcccHHHHHHHHHHHhccc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDVFKWKHLWKVLAEQFEIE 216 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~~s~~el~~~i~~~~G~~ 216 (309)
.++.. ..+|+++|||++++++.++.++. ..+.+||++++..++|.++++.+.+. |.+
T Consensus 1207 ~p~~~---~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~ 1265 (1389)
T TIGR03443 1207 IPNIN---NTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYD 1265 (1389)
T ss_pred cCCCC---CccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCC
Confidence 12222 45899999999999998887653 23579999999999999999999764 543
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.4e-16 Score=158.01 Aligned_cols=174 Identities=14% Similarity=0.080 Sum_probs=117.1
Q ss_pred CccEEEEeeccc----CC----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS----RP----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 12 ~vd~V~H~A~~~----~~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
+.|+|||||+.. .+ ++++++++|+.||+||+++|++. +++ +|+.||..|||....+.. ....|++|
T Consensus 428 ~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~--g~~-~v~~Ss~~v~~~~~~~~~---~~~~p~~E 501 (668)
T PLN02260 428 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN--GLL-MMNFATGCIFEYDAKHPE---GSGIGFKE 501 (668)
T ss_pred CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc--CCe-EEEEcccceecCCccccc---ccCCCCCc
Confidence 689999999843 11 56778999999999999999987 675 567788889864200000 01358899
Q ss_pred CCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccc
Q 045430 84 DLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWE 163 (309)
Q Consensus 84 ~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~ 163 (309)
++++.| +.+.|+..|+..|..... - -.+.++|+.++||++..+..+.+. .+.+ ...++.++
T Consensus 502 ~~~~~~-~~~~Yg~sK~~~E~~~~~-~---~~~~~~r~~~~~~~~~~~~~nfv~------~~~~-~~~~~~vp------- 562 (668)
T PLN02260 502 EDKPNF-TGSFYSKTKAMVEELLRE-Y---DNVCTLRVRMPISSDLSNPRNFIT------KISR-YNKVVNIP------- 562 (668)
T ss_pred CCCCCC-CCChhhHHHHHHHHHHHh-h---hhheEEEEEEecccCCCCccHHHH------HHhc-cceeeccC-------
Confidence 876543 234588777777766532 2 356888999999765322112111 1112 12233332
Q ss_pred cceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhc
Q 045430 164 GYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFE 214 (309)
Q Consensus 164 ~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G 214 (309)
.+..+++|++++++.++.. ..+.+|||++++.+||.|+...|++.++
T Consensus 563 --~~~~~~~~~~~~~~~l~~~--~~~giyni~~~~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 563 --NSMTVLDELLPISIEMAKR--NLRGIWNFTNPGVVSHNEILEMYKDYID 609 (668)
T ss_pred --CCceehhhHHHHHHHHHHh--CCCceEEecCCCcCcHHHHHHHHHHhcC
Confidence 2456778888887776653 2367999999999999999999999885
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=151.89 Aligned_cols=145 Identities=12% Similarity=0.039 Sum_probs=99.8
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
+.++|.|||+|+..... ...+|+.||.|++++|++. ++ |+||+||. ||.+ .
T Consensus 58 l~~~D~VIHLAa~~~~~---~~~vNv~Gt~nLleAA~~~--Gv-RiV~~SS~--~G~~----------~----------- 108 (699)
T PRK12320 58 AGEADAVIHLAPVDTSA---PGGVGITGLAHVANAAARA--GA-RLLFVSQA--AGRP----------E----------- 108 (699)
T ss_pred hcCCCEEEEcCccCccc---hhhHHHHHHHHHHHHHHHc--CC-eEEEEECC--CCCC----------c-----------
Confidence 45789999999854322 2368999999999999887 56 79999975 5632 1
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
.|...|.++.+ .+ ++++|+|+++||||+.......+. ..+... ...+.+ ..++
T Consensus 109 ---~~~~aE~ll~~-----~~---~p~~ILR~~nVYGp~~~~~~~r~I--~~~l~~-~~~~~p-------------I~vI 161 (699)
T PRK12320 109 ---LYRQAETLVST-----GW---APSLVIRIAPPVGRQLDWMVCRTV--ATLLRS-KVSARP-------------IRVL 161 (699)
T ss_pred ---cccHHHHHHHh-----cC---CCEEEEeCceecCCCCcccHhHHH--HHHHHH-HHcCCc-------------eEEE
Confidence 01234655432 45 899999999999996532222221 111110 011222 3458
Q ss_pred CHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHH
Q 045430 170 DADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQ 212 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~ 212 (309)
||||++++++.++..+. +.+|||++++.+|+.|+.+.++..
T Consensus 162 yVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 162 HLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred EHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHHHHHHHh
Confidence 99999999988886532 349999999999999998888555
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.2e-15 Score=133.97 Aligned_cols=169 Identities=17% Similarity=0.127 Sum_probs=111.4
Q ss_pred CccEEEEeecc-cC----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWA-SR----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~-~~----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+||. +. ..+.+..++||.||+|++++|.++ +++|||++||-++.- | .
T Consensus 77 ~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~--~v~~~v~ISTDKAv~-P----------t-------- 135 (293)
T PF02719_consen 77 KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH--GVERFVFISTDKAVN-P----------T-------- 135 (293)
T ss_dssp T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT--T-SEEEEEEECGCSS---------------------
T ss_pred CCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEccccccCC-C----------C--------
Confidence 79999999983 33 388999999999999999999997 799999999987652 1 0
Q ss_pred CCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccc
Q 045430 87 RLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGY 165 (309)
Q Consensus 87 ~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~ 165 (309)
.. ..+|.-+|+++..+... .+.....++++|++||.|-. ++..+. |..-- ..|.|+++.-. + -+
T Consensus 136 --nvmGatKrlaE~l~~~~~~~-~~~~~t~f~~VRFGNVlgS~-GSVip~------F~~Qi-~~g~PlTvT~p-~---mt 200 (293)
T PF02719_consen 136 --NVMGATKRLAEKLVQAANQY-SGNSDTKFSSVRFGNVLGSR-GSVIPL------FKKQI-KNGGPLTVTDP-D---MT 200 (293)
T ss_dssp --SHHHHHHHHHHHHHHHHCCT-SSSS--EEEEEEE-EETTGT-TSCHHH------HHHHH-HTTSSEEECET-T----E
T ss_pred --cHHHHHHHHHHHHHHHHhhh-CCCCCcEEEEEEecceecCC-CcHHHH------HHHHH-HcCCcceeCCC-C---cE
Confidence 00 12344445544444332 20112799999999999954 355443 32211 24889988543 2 67
Q ss_pred eeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhcccc
Q 045430 166 SVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIEN 217 (309)
Q Consensus 166 ~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~ 217 (309)
|.|..+++.++-++.|+... ..||+|..--|+++++.||...+.+..|...
T Consensus 201 Rffmti~EAv~Lvl~a~~~~-~~geifvl~mg~~v~I~dlA~~~i~~~g~~~ 251 (293)
T PF02719_consen 201 RFFMTIEEAVQLVLQAAALA-KGGEIFVLDMGEPVKILDLAEAMIELSGLEP 251 (293)
T ss_dssp EEEE-HHHHHHHHHHHHHH---TTEEEEE---TCEECCCHHHHHHHHTT-EE
T ss_pred EEEecHHHHHHHHHHHHhhC-CCCcEEEecCCCCcCHHHHHHHHHhhccccc
Confidence 99999999999988888642 3589999999999999999999999999754
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.9e-14 Score=128.04 Aligned_cols=252 Identities=13% Similarity=0.052 Sum_probs=166.6
Q ss_pred hccCCCCccEEEEeecc-----cCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 6 KLSKLTDVTHIFYVTWA-----SRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 6 ~~~~~~~vd~V~H~A~~-----~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.|+.+ .-|-|||+||- +-..|....++|..||.|+|||++..++.=-||...||+.-||.. ...|
T Consensus 73 ~l~~v-~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v---------~~~p 142 (345)
T COG1089 73 ILEEV-QPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLV---------QEIP 142 (345)
T ss_pred HHHhc-CchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCc---------ccCc
Confidence 34443 46899999983 222677788999999999999999886433589999999999964 3789
Q ss_pred CCCCCCCCCcccchHHHHHHH-----HHHHHhcCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhH-hCCc-
Q 045430 81 FTEDLPRLNVTNFYYTQEDIL-----FEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKH-EGVP- 152 (309)
Q Consensus 81 ~~E~~p~~p~p~~~y~~e~~~-----~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~-~g~~- 152 (309)
.+|+.|..|. |-|+..|+- ..|-. .+| +-.|.-+.+|==+|.-+ .+.. -.|-.++++. .|..
T Consensus 143 q~E~TPFyPr--SPYAvAKlYa~W~tvNYRe-sYg---l~AcnGILFNHESP~Rge~FVT----RKIt~ava~Ik~G~q~ 212 (345)
T COG1089 143 QKETTPFYPR--SPYAVAKLYAYWITVNYRE-SYG---LFACNGILFNHESPLRGETFVT----RKITRAVARIKLGLQD 212 (345)
T ss_pred cccCCCCCCC--CHHHHHHHHHHheeeehHh-hcC---ceeecceeecCCCCCCccceeh----HHHHHHHHHHHccccc
Confidence 9999998865 347766542 22322 478 88888888887777554 2322 2333344442 2332
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHH
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEI 232 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~ 232 (309)
-...|+-+ ..||+.|+.|-++++.+.++.+. .+.|+|+.|+..|.+|+.+...+..|....... ..
T Consensus 213 ~l~lGNld---AkRDWG~A~DYVe~mwlmLQq~~--PddyViATg~t~sVrefv~~Af~~~g~~l~w~g---------~g 278 (345)
T COG1089 213 KLYLGNLD---AKRDWGHAKDYVEAMWLMLQQEE--PDDYVIATGETHSVREFVELAFEMVGIDLEWEG---------TG 278 (345)
T ss_pred eEEecccc---ccccccchHHHHHHHHHHHccCC--CCceEEecCceeeHHHHHHHHHHHcCceEEEee---------cc
Confidence 33567776 78999999999999887776653 689999999999999999999999995543110 00
Q ss_pred HhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHH
Q 045430 233 MRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKM 302 (309)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~ 302 (309)
+...+ .-.+-|-..-.++.. -+...+.- -...|.+||++ |||.|+++++|-++..+++.
T Consensus 279 ~~e~g-----~da~~G~~~V~idp~-~fRPaEV~-----~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~d 338 (345)
T COG1089 279 VDEKG-----VDAKTGKIIVEIDPR-YFRPAEVD-----LLLGDPTKAKEKLGWRPEVSLEELVREMVEAD 338 (345)
T ss_pred ccccc-----cccccCceeEEECcc-ccCchhhh-----hhcCCHHHHHHHcCCccccCHHHHHHHHHHHH
Confidence 00000 000000000000000 00001100 13579999985 89999999999999988764
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.5e-15 Score=132.40 Aligned_cols=153 Identities=19% Similarity=0.091 Sum_probs=73.4
Q ss_pred CCccEEEEeec-cc-CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC--CCCCCC
Q 045430 11 TDVTHIFYVTW-AS-RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP--FTEDLP 86 (309)
Q Consensus 11 ~~vd~V~H~A~-~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p--~~E~~p 86 (309)
+.||+|||+|+ ++ ..+.+++.++||.||+|+++-|.+. ..++|+|+||..+.|.. .+.. ...+ ..|+..
T Consensus 86 ~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~--~~~~~~~iSTa~v~~~~---~~~~--~~~~~~~~~~~~ 158 (249)
T PF07993_consen 86 EEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG--KRKRFHYISTAYVAGSR---PGTI--EEKVYPEEEDDL 158 (249)
T ss_dssp HH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS--S---EEEEEEGGGTTS----TTT----SSS-HHH--EE
T ss_pred cccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc--cCcceEEeccccccCCC---CCcc--cccccccccccc
Confidence 36899999999 33 3377789999999999999999965 35699999995455532 0000 0000 122221
Q ss_pred CCC-c-c----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecc-cCCCcchhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 87 RLN-V-T----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGF-SPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 87 ~~p-~-p----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp-~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
..+ . + .+|+.+|+++.+...+ .+ +|++|+||+.|+|. ..+.....-..+..+.... ..|.....+++.
T Consensus 159 ~~~~~~~~gY~~SK~~aE~~l~~a~~~-~g---~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~-~~~~~p~~~~~~ 233 (249)
T PF07993_consen 159 DPPQGFPNGYEQSKWVAERLLREAAQR-HG---LPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCI-ALGAFPDLPGDP 233 (249)
T ss_dssp E--TTSEE-HHHHHHHHHHHHHHHHHH-H------EEEEEE-EEE-SSSSS---TTBHHHHHHHHHH-HH-EEES-SB--
T ss_pred hhhccCCccHHHHHHHHHHHHHHHHhc-CC---ceEEEEecCcccccCCCceeeccchHHHHHHHHH-HcCCcccccCCC
Confidence 111 1 2 3345566666665543 47 99999999999993 2221111110111222221 234433456665
Q ss_pred cccccceeccCHHHHHHHH
Q 045430 160 DCWEGYSVASDADLIAEQH 178 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~ 178 (309)
. ...|++.||.+|++|
T Consensus 234 ~---~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 234 D---ARLDLVPVDYVARAI 249 (249)
T ss_dssp ----TT--EEEHHHHHHHH
T ss_pred C---ceEeEECHHHHHhhC
Confidence 5 458999999999985
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-13 Score=124.16 Aligned_cols=156 Identities=15% Similarity=0.161 Sum_probs=106.7
Q ss_pred cCCCC-ccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 8 SKLTD-VTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 8 ~~~~~-vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
.+++| +|.|||++.... + .+..++|++++|+++ +++|||++||..++-. . +
T Consensus 62 ~~~~g~~d~v~~~~~~~~-~-------~~~~~~~~i~aa~~~--gv~~~V~~Ss~~~~~~-----------~-~------ 113 (285)
T TIGR03649 62 DGMEPEISAVYLVAPPIP-D-------LAPPMIKFIDFARSK--GVRRFVLLSASIIEKG-----------G-P------ 113 (285)
T ss_pred cCcCCceeEEEEeCCCCC-C-------hhHHHHHHHHHHHHc--CCCEEEEeeccccCCC-----------C-c------
Confidence 34567 999999986321 1 134667999999987 7999999998644311 0 0
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
.+...|.++++ ..+ ++||++||+.+|+......+. ..+ +..+ ++. .+.++ ..+
T Consensus 114 ------~~~~~~~~l~~----~~g---i~~tilRp~~f~~~~~~~~~~--------~~~-~~~~-~~~-~~~g~---~~~ 166 (285)
T TIGR03649 114 ------AMGQVHAHLDS----LGG---VEYTVLRPTWFMENFSEEFHV--------EAI-RKEN-KIY-SATGD---GKI 166 (285)
T ss_pred ------hHHHHHHHHHh----ccC---CCEEEEeccHHhhhhcccccc--------ccc-ccCC-eEE-ecCCC---Ccc
Confidence 01122444432 137 999999999988643111100 011 1112 332 33343 558
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccC
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~ 218 (309)
++++++|+|+++..++.++...|+.||+++++.+|+.|+++.+++.+|.+..
T Consensus 167 ~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~ 218 (285)
T TIGR03649 167 PFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKIT 218 (285)
T ss_pred CcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceE
Confidence 9999999999998888877667899999999999999999999999998754
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-13 Score=133.40 Aligned_cols=165 Identities=18% Similarity=0.131 Sum_probs=124.5
Q ss_pred ccEEEEeec-ccCC----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 13 VTHIFYVTW-ASRP----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 13 vd~V~H~A~-~~~~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
+|+|||+|| .+.| +|.|-+++||.||+|+++||.++ +|++||++||-++--.. ..
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~--~V~~~V~iSTDKAV~Pt----------Nv-------- 385 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN--GVKKFVLISTDKAVNPT----------NV-------- 385 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh--CCCEEEEEecCcccCCc----------hH--------
Confidence 999999998 4555 88999999999999999999998 79999999997655210 00
Q ss_pred CCcccchHHHHHHHHHHHHhcC--CCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccc
Q 045430 88 LNVTNFYYTQEDILFEEVEKRK--GPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGY 165 (309)
Q Consensus 88 ~p~p~~~y~~e~~~~~~~~~~~--~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~ 165 (309)
-..+|.-+|+++..+..... + -.++++|++||.|-+ ++..+ +|...- ..|.|+++. +.. -+
T Consensus 386 --mGaTKr~aE~~~~a~~~~~~~~~---T~f~~VRFGNVlGSr-GSViP------lFk~QI-~~GgplTvT-dp~---mt 448 (588)
T COG1086 386 --MGATKRLAEKLFQAANRNVSGTG---TRFCVVRFGNVLGSR-GSVIP------LFKKQI-AEGGPLTVT-DPD---MT 448 (588)
T ss_pred --hhHHHHHHHHHHHHHhhccCCCC---cEEEEEEecceecCC-CCCHH------HHHHHH-HcCCCcccc-CCC---ce
Confidence 01345555655555443111 3 789999999999965 35444 333322 247888874 333 67
Q ss_pred eeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhcc
Q 045430 166 SVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEI 215 (309)
Q Consensus 166 ~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~ 215 (309)
|.|..+.+.++..+.|... ...||+|-.--|+++++.||.+.+-+.+|.
T Consensus 449 RyfMTI~EAv~LVlqA~a~-~~gGeifvldMGepvkI~dLAk~mi~l~g~ 497 (588)
T COG1086 449 RFFMTIPEAVQLVLQAGAI-AKGGEIFVLDMGEPVKIIDLAKAMIELAGQ 497 (588)
T ss_pred eEEEEHHHHHHHHHHHHhh-cCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence 8999999999988888754 346899999999999999999999999993
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-12 Score=121.05 Aligned_cols=106 Identities=21% Similarity=0.111 Sum_probs=79.6
Q ss_pred CccEEEEeec-cc-CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTW-AS-RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 12 ~vd~V~H~A~-~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
.||+|||+|+ ++ .-+..++...||.||..+++-|..- +.|.|.|+||++|+.....+.. ..-.+|+++...
T Consensus 87 ~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g--k~Kp~~yVSsisv~~~~~~~~~-----~~~~~~~~~~~~ 159 (382)
T COG3320 87 NVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG--KPKPLHYVSSISVGETEYYSNF-----TVDFDEISPTRN 159 (382)
T ss_pred hcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC--CCceeEEEeeeeeccccccCCC-----cccccccccccc
Confidence 4899999998 44 4488999999999999999999765 5789999999999975422211 112223333221
Q ss_pred c--------ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccC
Q 045430 90 V--------TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSP 129 (309)
Q Consensus 90 ~--------p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~ 129 (309)
. ..|||.+|+++++... .| +|++|+||+.|-|...
T Consensus 160 ~~~~~~~GY~~SKwvaE~Lvr~A~~--rG---Lpv~I~Rpg~I~gds~ 202 (382)
T COG3320 160 VGQGLAGGYGRSKWVAEKLVREAGD--RG---LPVTIFRPGYITGDSR 202 (382)
T ss_pred ccCccCCCcchhHHHHHHHHHHHhh--cC---CCeEEEecCeeeccCc
Confidence 1 1678888888888776 37 9999999999999966
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.7e-12 Score=112.73 Aligned_cols=163 Identities=13% Similarity=0.077 Sum_probs=105.3
Q ss_pred CCccEEEEeecccC-CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR-PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
.++|+|||+++... .++.+.+++|..++.|+++++.+. +++|||++||..+||.. ...+..+.....
T Consensus 84 ~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~iV~iSS~~v~g~~---------~~~~~~~~~~~~- 151 (251)
T PLN00141 84 DDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKA--GVTRFILVSSILVNGAA---------MGQILNPAYIFL- 151 (251)
T ss_pred cCCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHc--CCCEEEEEccccccCCC---------cccccCcchhHH-
Confidence 47999999988532 233445689999999999999876 68999999999999853 122222221100
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
.+...+...+...|...+..+ ++|+++||+.+++..... .....++... ....+
T Consensus 152 ~~~~~~~~~k~~~e~~l~~~g---i~~~iirpg~~~~~~~~~-------------------~~~~~~~~~~----~~~~i 205 (251)
T PLN00141 152 NLFGLTLVAKLQAEKYIRKSG---INYTIVRPGGLTNDPPTG-------------------NIVMEPEDTL----YEGSI 205 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---CcEEEEECCCccCCCCCc-------------------eEEECCCCcc----ccCcc
Confidence 011112233433332221357 999999999999854211 1111122211 12357
Q ss_pred CHHHHHHHHHHHhcCCCCCCcceeecC---CCcccHHHHHHHHHH
Q 045430 170 DADLIAEQHIWAAVDPYARNEAFNCSN---GDVFKWKHLWKVLAE 211 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~a~g~~fNI~~---g~~~s~~el~~~i~~ 211 (309)
+.+|+|+++..++..+...+.++.|.+ +...++.++...|++
T Consensus 206 ~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 206 SRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred cHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 899999999999887766678888885 333889999888764
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.4e-11 Score=105.02 Aligned_cols=165 Identities=11% Similarity=0.048 Sum_probs=121.2
Q ss_pred CccEEEEeecccCC-ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCc
Q 045430 12 DVTHIFYVTWASRP-TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNV 90 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~ 90 (309)
...+|+.+-+-..+ ..=+|.++|+.+.+.+...|++. ||+||||+|+..+- ++-.+..
T Consensus 130 ~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~--GVerfIhvS~Lgan----------------v~s~Sr~--- 188 (391)
T KOG2865|consen 130 HSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEA--GVERFIHVSCLGAN----------------VKSPSRM--- 188 (391)
T ss_pred hCcEEEEeeccccccCCcccccccchHHHHHHHHHHhh--Chhheeehhhcccc----------------ccChHHH---
Confidence 35788888774333 22348899999999999999998 89999999998411 1100100
Q ss_pred ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccC
Q 045430 91 TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASD 170 (309)
Q Consensus 91 p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~ 170 (309)
..+|+..|+.+++.. -+.||+||..|||--|+=+ .-|.++-|.. .+++..|.|. +.....+|
T Consensus 189 LrsK~~gE~aVrdaf--------PeAtIirPa~iyG~eDrfl-------n~ya~~~rk~-~~~pL~~~Ge--kT~K~PVy 250 (391)
T KOG2865|consen 189 LRSKAAGEEAVRDAF--------PEATIIRPADIYGTEDRFL-------NYYASFWRKF-GFLPLIGKGE--KTVKQPVY 250 (391)
T ss_pred HHhhhhhHHHHHhhC--------CcceeechhhhcccchhHH-------HHHHHHHHhc-CceeeecCCc--ceeeccEE
Confidence 245777888777632 3579999999999887522 2334444433 3567777665 24457889
Q ss_pred HHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhcc
Q 045430 171 ADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEI 215 (309)
Q Consensus 171 vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~ 215 (309)
|-|+|.+|+-|+..|.+.|.+|-..+.+.+.+.||++.+-+..-.
T Consensus 251 V~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~ 295 (391)
T KOG2865|consen 251 VVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMARE 295 (391)
T ss_pred EehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhh
Confidence 999999999999889899999999999999999999988776654
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.6e-10 Score=100.86 Aligned_cols=169 Identities=8% Similarity=0.030 Sum_probs=103.2
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
+...++|+|||+|+.... +.++.+++|+.|+.++++++ ++. +.+|||++||...+..
T Consensus 72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~iv~~sS~~~~~~-------- 141 (276)
T PRK06482 72 AALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ--GGGRIVQVSSEGGQIA-------- 141 (276)
T ss_pred HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEEcCcccccC--------
Confidence 345678999999984321 22446789999999999997 443 4689999999643321
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCce---ecccCCC--cchh--HHHHHHHHH
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHII---FGFSPYS--MMNV--VGTLCVYAA 144 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~V---yGp~~~~--~~~~--~~~~~i~~~ 144 (309)
.| .... ..+|...|.+++.++.+ ..+ ++++++||+.+ ||++... .... ......+..
T Consensus 142 ----~~------~~~~Y~~sK~a~~~~~~~l~~~~~~~g---i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (276)
T PRK06482 142 ----YP------GFSLYHATKWGIEGFVEAVAQEVAPFG---IEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRR 208 (276)
T ss_pred ----CC------CCchhHHHHHHHHHHHHHHHHHhhccC---cEEEEEeCCccccCCcccccccCCCccccchhhHHHHH
Confidence 11 0011 13455556555554432 247 99999999988 7765421 1100 000111111
Q ss_pred HHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhc
Q 045430 145 ICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFE 214 (309)
Q Consensus 145 l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G 214 (309)
.. .+.++. -..+++|++++++.++..+. .+..||+++++..+..|+...+.+.++
T Consensus 209 ~~--~~~~~~------------~~~d~~~~~~a~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 209 AL--ADGSFA------------IPGDPQKMVQAMIASADQTP-APRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred HH--hhccCC------------CCCCHHHHHHHHHHHHcCCC-CCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 00 011111 12468999999999887543 356899999998888877777766664
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.1e-10 Score=99.05 Aligned_cols=154 Identities=10% Similarity=-0.023 Sum_probs=95.4
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHH----HHHHHHHh-CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAM----LRNVLRSV-IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~g----t~nll~a~-~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.++|+|||+|+.... ..++.+++|+.+ ++++++++ ++. +.+|||++||...+..
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~~~~iv~~ss~~~~~~---------- 150 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD--RGGVVIYMGSVHSHEA---------- 150 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc--CCcEEEEEcchhhcCC----------
Confidence 468999999984211 234567899999 88888888 543 5799999999643321
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc--
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP-- 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~-- 152 (309)
.|... . -..+|...+.+++.++.+ ..+ +.++++||+.|+||...+.+... .+..+..
T Consensus 151 --~~~~~--~---y~~sk~a~~~~~~~la~~~~~~~---i~v~~v~pg~v~~~~~~~~~~~~---------~~~~~~~~~ 211 (262)
T PRK13394 151 --SPLKS--A---YVTAKHGLLGLARVLAKEGAKHN---VRSHVVCPGFVRTPLVDKQIPEQ---------AKELGISEE 211 (262)
T ss_pred --CCCCc--c---cHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCcccchhhhhhhHhh---------hhccCCChH
Confidence 11110 0 013455555555554432 146 99999999999998643322110 0000000
Q ss_pred ---eeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC
Q 045430 153 ---LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD 198 (309)
Q Consensus 153 ---~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~ 198 (309)
-.+.+.+. ..+++++++|+++++++++..+. ..|+.|++.+|.
T Consensus 212 ~~~~~~~~~~~---~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 212 EVVKKVMLGKT---VDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred HHHHHHHhcCC---CCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 01122222 45789999999999998886543 348999999874
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.6e-10 Score=95.03 Aligned_cols=125 Identities=15% Similarity=0.209 Sum_probs=81.6
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++++|+|||+++.... .+..+++++++|++. +++|||++||..+|+.. ........+ +
T Consensus 58 l~~~d~vi~~~~~~~~--------~~~~~~~~~~a~~~~--~~~~~v~~s~~~~~~~~----------~~~~~~~~~--~ 115 (183)
T PF13460_consen 58 LKGADAVIHAAGPPPK--------DVDAAKNIIEAAKKA--GVKRVVYLSSAGVYRDP----------PGLFSDEDK--P 115 (183)
T ss_dssp HTTSSEEEECCHSTTT--------HHHHHHHHHHHHHHT--TSSEEEEEEETTGTTTC----------TSEEEGGTC--G
T ss_pred hhhcchhhhhhhhhcc--------ccccccccccccccc--ccccceeeeccccCCCC----------Ccccccccc--c
Confidence 3478999999974333 289999999999987 79999999999999853 111111111 1
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
.+..|+.......+... ..+ ++|+++||+.+||+... .. .+...+ +. ....++
T Consensus 116 ~~~~~~~~~~~~e~~~~-~~~---~~~~ivrp~~~~~~~~~-~~------------------~~~~~~-~~---~~~~~i 168 (183)
T PF13460_consen 116 IFPEYARDKREAEEALR-ESG---LNWTIVRPGWIYGNPSR-SY------------------RLIKEG-GP---QGVNFI 168 (183)
T ss_dssp GGHHHHHHHHHHHHHHH-HST---SEEEEEEESEEEBTTSS-SE------------------EEESST-ST---TSHCEE
T ss_pred chhhhHHHHHHHHHHHH-hcC---CCEEEEECcEeEeCCCc-ce------------------eEEecc-CC---CCcCcC
Confidence 11223333333333333 357 99999999999998743 11 111112 22 335889
Q ss_pred CHHHHHHHHHHHhc
Q 045430 170 DADLIAEQHIWAAV 183 (309)
Q Consensus 170 ~vd~la~a~i~aa~ 183 (309)
+++|+|++++.+++
T Consensus 169 ~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 169 SREDVAKAIVEALE 182 (183)
T ss_dssp EHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999998875
|
... |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.3e-10 Score=97.69 Aligned_cols=151 Identities=11% Similarity=0.010 Sum_probs=92.0
Q ss_pred CCCccEEEEeecccC--C-------ChHHHHHhHHHHHHHHHHHhCcCCC-CCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR--P-------TEAENCEVNGAMLRNVLRSVIPNAP-NLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~--~-------~~~~~~~vNv~gt~nll~a~~~~~~-~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
+.++|+|||+|+... + ++++.+++|+.|+.++++++...-. .-.+++..|| +++
T Consensus 83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~--~~~-------------- 146 (249)
T PRK09135 83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD--IHA-------------- 146 (249)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC--hhh--------------
Confidence 346899999998421 1 2455789999999999999964210 1123444443 222
Q ss_pred CCCCCCCCCCc---ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 80 PFTEDLPRLNV---TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 80 p~~E~~p~~p~---p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
+.|..|. ..+|+..|.+++.+..+. .+ +.++++||+.||||.+...++... .. .. ..+.++
T Consensus 147 ----~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~---i~~~~v~pg~~~~~~~~~~~~~~~---~~-~~--~~~~~~-- 211 (249)
T PRK09135 147 ----ERPLKGYPVYCAAKAALEMLTRSLALELAPE---VRVNAVAPGAILWPEDGNSFDEEA---RQ-AI--LARTPL-- 211 (249)
T ss_pred ----cCCCCCchhHHHHHHHHHHHHHHHHHHHCCC---CeEEEEEeccccCccccccCCHHH---HH-HH--HhcCCc--
Confidence 1111122 145677777777766532 25 899999999999998754332211 00 11 112221
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcC-CCCCCcceeecCCCccc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVD-PYARNEAFNCSNGDVFK 201 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~-~~a~g~~fNI~~g~~~s 201 (309)
. -...++|+|+++.+++.. +...|++|||++|..++
T Consensus 212 ~----------~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 212 K----------RIGTPEDIAEAVRFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred C----------CCcCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence 1 112479999998676654 34569999999998765
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.7e-09 Score=96.41 Aligned_cols=157 Identities=11% Similarity=0.007 Sum_probs=95.0
Q ss_pred CCCCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
.+.++|+|||+|+.... + .++.+++|+.|+.++++++ ++. ++++||++||...+...
T Consensus 75 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~~~~v~~ss~~~~~~~-------- 144 (255)
T TIGR01963 75 EFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ--GWGRIINIASAHGLVAS-------- 144 (255)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEEcchhhcCCC--------
Confidence 45678999999984211 2 2446789999988888876 443 57899999998666421
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
|..+ +. ..+|...+.+++.++.+ ..+ ++++++||+.|+||...+.+. ...+..+.+.
T Consensus 145 ----~~~~--~y---~~sk~a~~~~~~~~~~~~~~~~---i~v~~i~pg~v~~~~~~~~~~---------~~~~~~~~~~ 203 (255)
T TIGR01963 145 ----PFKS--AY---VAAKHGLIGLTKVLALEVAAHG---ITVNAICPGYVRTPLVEKQIA---------DQAKTRGIPE 203 (255)
T ss_pred ----CCCc--hh---HHHHHHHHHHHHHHHHHhhhcC---eEEEEEecCccccHHHHHHHH---------hhhcccCCCc
Confidence 1110 00 12344445454443321 146 999999999999985322111 0000001100
Q ss_pred e-----ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 154 L-----FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 154 ~-----~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
. ..+.+. ..+++++++|+|+++++++..+ ...|+.||+++|..
T Consensus 204 ~~~~~~~~~~~~---~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 204 EQVIREVMLPGQ---PTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT 253 (255)
T ss_pred hHHHHHHHHccC---ccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence 0 001111 4468999999999999988754 23589999998764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.2e-09 Score=89.31 Aligned_cols=215 Identities=12% Similarity=0.086 Sum_probs=135.4
Q ss_pred ChHHHHHhHHH-----HHHHHHHHhCcCCCCCc-eEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCcccchHHHHH
Q 045430 26 TEAENCEVNGA-----MLRNVLRSVIPNAPNLR-HVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQED 99 (309)
Q Consensus 26 ~~~~~~~vNv~-----gt~nll~a~~~~~~~v~-r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~p~~~y~~e~ 99 (309)
.+...++-||. -|..|.+|+.++ |... -+|++|+.++|-.. ...-.+|+++-. .+.|-+-.
T Consensus 91 RWsp~fqkev~gSRi~~t~~la~aI~~a-Pq~~~~~Vlv~gva~y~pS---------~s~eY~e~~~~q---gfd~~srL 157 (315)
T KOG3019|consen 91 RWSPEFQKEVKGSRIRVTSKLADAINNA-PQEARPTVLVSGVAVYVPS---------ESQEYSEKIVHQ---GFDILSRL 157 (315)
T ss_pred hcCHHHHHHhhcceeeHHHHHHHHHhcC-CCCCCCeEEEEeeEEeccc---------cccccccccccC---ChHHHHHH
Confidence 44445555554 467788888775 5554 69999999999632 234477887643 22232221
Q ss_pred -HHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHH
Q 045430 100 -ILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQH 178 (309)
Q Consensus 100 -~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~ 178 (309)
+..|.++.+ +.++...+++|-+.|.|-+.+.+..+..+ |. -..|.|+ |+|. |.+.++++|||+.-+
T Consensus 158 ~l~WE~aA~~-~~~~~r~~~iR~GvVlG~gGGa~~~M~lp---F~---~g~GGPl---GsG~---Q~fpWIHv~DL~~li 224 (315)
T KOG3019|consen 158 CLEWEGAALK-ANKDVRVALIRIGVVLGKGGGALAMMILP---FQ---MGAGGPL---GSGQ---QWFPWIHVDDLVNLI 224 (315)
T ss_pred HHHHHHHhhc-cCcceeEEEEEEeEEEecCCcchhhhhhh---hh---hccCCcC---CCCC---eeeeeeehHHHHHHH
Confidence 112222211 22238999999999999876544333221 11 1346663 7888 559999999999999
Q ss_pred HHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccc
Q 045430 179 IWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVA 258 (309)
Q Consensus 179 i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (309)
..|++++.-.| +.|-.-..+.+..|+.+.+.+.|+++.-.| +|-.+...+. |.+.-.+
T Consensus 225 ~~ale~~~v~G-ViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~p----vP~fvvqA~f-------------G~erA~~---- 282 (315)
T KOG3019|consen 225 YEALENPSVKG-VINGVAPNPVRNGEFCQQLGSALSRPSWLP----VPDFVVQALF-------------GPERATV---- 282 (315)
T ss_pred HHHHhcCCCCc-eecccCCCccchHHHHHHHHHHhCCCcccC----CcHHHHHHHh-------------CccceeE----
Confidence 99988765544 778888899999999999999999776433 3322222221 2111111
Q ss_pred hhhHHHHHhhcccccccChhhHHhcCCCCcC-ChHHHHHHH
Q 045430 259 VWWFADMMLDGGFLLLDSMNKSKEHGFLGFR-NSKNSFVNW 298 (309)
Q Consensus 259 ~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~-~~~~gl~~t 298 (309)
++. -+-+=..|+.++||+-++ .+.+++++.
T Consensus 283 -------vLe---GqKV~Pqral~~Gf~f~yp~vk~Al~~i 313 (315)
T KOG3019|consen 283 -------VLE---GQKVLPQRALELGFEFKYPYVKDALRAI 313 (315)
T ss_pred -------Eee---CCcccchhHhhcCceeechHHHHHHHHH
Confidence 111 234567888899999887 466777654
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.3e-10 Score=105.83 Aligned_cols=189 Identities=15% Similarity=0.127 Sum_probs=116.1
Q ss_pred CCCccEEEEeecccCC--ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP--TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~--~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
.+.|++|||+||...- ..+--..+|+.||+|+++-|++. ++++-|||+||.-+. ..-.+..+ ...|..|..+.
T Consensus 104 ~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~n-~~~~~i~E---~~y~~~~~~~~ 178 (467)
T KOG1221|consen 104 ADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYSN-CNVGHIEE---KPYPMPETCNP 178 (467)
T ss_pred HhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhhee-cccccccc---cccCccccCCH
Confidence 4578999999995433 33456799999999999999986 489999999997554 11111111 11222221111
Q ss_pred C----------------------C-cccch----HHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHH---
Q 045430 88 L----------------------N-VTNFY----YTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVG--- 137 (309)
Q Consensus 88 ~----------------------p-~p~~~----y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~--- 137 (309)
. + .||+| --+|.++.++ ..+ +|.+|+||+.|...-.-.+.+.+.
T Consensus 179 ~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~---~~~---lPivIiRPsiI~st~~EP~pGWidn~~ 252 (467)
T KOG1221|consen 179 EKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE---AEN---LPLVIIRPSIITSTYKEPFPGWIDNLN 252 (467)
T ss_pred HHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh---ccC---CCeEEEcCCceeccccCCCCCccccCC
Confidence 1 1 13442 1144444433 245 999999999998763211111110
Q ss_pred -HHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhc-CCCCCC----cceeecCC--CcccHHHHHHHH
Q 045430 138 -TLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAV-DPYARN----EAFNCSNG--DVFKWKHLWKVL 209 (309)
Q Consensus 138 -~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~-~~~a~g----~~fNI~~g--~~~s~~el~~~i 209 (309)
+.++.... +.|.--.+.++.+ ...|++-||.+|.++|.++- +..... .+||++++ .+++|.++.+..
T Consensus 253 gp~g~i~g~--gkGvlr~~~~d~~---~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~ 327 (467)
T KOG1221|consen 253 GPDGVIIGY--GKGVLRCFLVDPK---AVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELA 327 (467)
T ss_pred CCceEEEEe--ccceEEEEEEccc---cccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHH
Confidence 01111111 1243334555655 67899999999999997662 222223 39999975 459999999998
Q ss_pred HHHhc
Q 045430 210 AEQFE 214 (309)
Q Consensus 210 ~~~~G 214 (309)
.+++-
T Consensus 328 ~~~~~ 332 (467)
T KOG1221|consen 328 LRYFE 332 (467)
T ss_pred HHhcc
Confidence 88876
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.1e-09 Score=91.69 Aligned_cols=149 Identities=11% Similarity=0.007 Sum_probs=95.7
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|.|||+|+.... ++++..++|+.++.++++++. +. +.++||++||...|+..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~i~~SS~~~~~~~--------- 150 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ--RGGRIVNISSVAGLPGW--------- 150 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCEEEEECccccCCCC---------
Confidence 3578999999984322 234568999999999999973 33 57899999998777421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
. + ... ..+|...+.++..++.+ ..+ +.++++||+.++|+......... .... ....
T Consensus 151 -~-~-------~~~y~~sK~~~~~~~~~~~~~~~~~~---i~~~~i~pg~~~~~~~~~~~~~~-------~~~~--~~~~ 209 (249)
T PRK12825 151 -P-G-------RSNYAAAKAGLVGLTKALARELAEYG---ITVNMVAPGDIDTDMKEATIEEA-------REAK--DAET 209 (249)
T ss_pred -C-C-------chHHHHHHHHHHHHHHHHHHHHhhcC---eEEEEEEECCccCCccccccchh-------HHhh--hccC
Confidence 0 0 000 12344455555444432 147 99999999999998653322110 0000 0011
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
+ ...+++++|+++++.+++.++ ...|+.|+|++|..+
T Consensus 210 ~----------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 210 P----------LGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred C----------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence 1 123678899999999988654 346999999998654
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-08 Score=101.14 Aligned_cols=157 Identities=12% Similarity=0.043 Sum_probs=98.3
Q ss_pred CCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
+.++|+|||+|+... .++...+++|+.|+.|++++|++. +++|||++||..++.. ..+. . .
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a--gVgRIV~VSSiga~~~-----------g~p~--~-~ 220 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA--KVNHFILVTSLGTNKV-----------GFPA--A-I 220 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh--CCCEEEEEccchhccc-----------Cccc--c-c
Confidence 457899999998532 245567899999999999999886 6899999999865311 1110 0 1
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccc
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWE 163 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~ 163 (309)
.... . ..+...|+++. ..+ ++|+||||+.++++.+..... .+ +.....+.
T Consensus 221 ~~sk~~~~~~KraaE~~L~-----~sG---IrvTIVRPG~L~tp~d~~~~t--------------~~--v~~~~~d~--- 273 (576)
T PLN03209 221 LNLFWGVLCWKRKAEEALI-----ASG---LPYTIVRPGGMERPTDAYKET--------------HN--LTLSEEDT--- 273 (576)
T ss_pred hhhHHHHHHHHHHHHHHHH-----HcC---CCEEEEECCeecCCccccccc--------------cc--eeeccccc---
Confidence 1111 0 11222333332 257 999999999999886532100 00 11111110
Q ss_pred cceeccCHHHHHHHHHHHhcCCC-CCCcceeecCCCc---ccHHHHHHHH
Q 045430 164 GYSVASDADLIAEQHIWAAVDPY-ARNEAFNCSNGDV---FKWKHLWKVL 209 (309)
Q Consensus 164 ~~~~~~~vd~la~a~i~aa~~~~-a~g~~fNI~~g~~---~s~~el~~~i 209 (309)
...-.+.-+|||++++.++.++. ..+++|.|.++.. .++.++|..|
T Consensus 274 ~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 274 LFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred cCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence 11123567889999999887654 5689999998753 5566666554
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.4e-09 Score=94.04 Aligned_cols=174 Identities=10% Similarity=-0.108 Sum_probs=103.9
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
.+.++|+|||+|+.... ++++.+++|+.++.++++++ ++. +.++||++||...+...
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~vsS~~~~~~~-------- 143 (275)
T PRK08263 74 HFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ--RSGHIIQISSIGGISAF-------- 143 (275)
T ss_pred HcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCEEEEEcChhhcCCC--------
Confidence 34578999999984321 34557899999998888876 343 46799999998766531
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
... .++ -.+|...+.+.+.++.+ ..+ ++++++||+.+..+..+..+........+..+....
T Consensus 144 -~~~-----~~Y---~~sKaa~~~~~~~la~e~~~~g---i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---- 207 (275)
T PRK08263 144 -PMS-----GIY---HASKWALEGMSEALAQEVAEFG---IKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREEL---- 207 (275)
T ss_pred -CCc-----cHH---HHHHHHHHHHHHHHHHHhhhhC---cEEEEEecCCccCCccccccccCCCchhhhhHHHHH----
Confidence 000 000 12345555444444331 257 999999999887653321100000001111111100
Q ss_pred eecCCccccccceec-cCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhc
Q 045430 154 LFPGSKDCWEGYSVA-SDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFE 214 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~-~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G 214 (309)
+... ....+ .+++|++++++.++.++...++.|+.+.+..+++.++.+.+.++-+
T Consensus 208 ---~~~~---~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 208 ---AEQW---SERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred ---HHHH---HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 0000 22345 7899999999998887666666555555577999999998877644
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.3e-08 Score=87.92 Aligned_cols=241 Identities=13% Similarity=0.096 Sum_probs=144.8
Q ss_pred CccEEEEeeccc-CC---ChHHH-HHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS-RP---TEAEN-CEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 12 ~vd~V~H~A~~~-~~---~~~~~-~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
.-|-|||+|+-+ .. +..+| .+|...||.+||+|++... .+| ||-..||+.-||.. ...|-+|.
T Consensus 106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~V-rfYQAstSElyGkv---------~e~PQsE~ 175 (376)
T KOG1372|consen 106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKV-RFYQASTSELYGKV---------QEIPQSET 175 (376)
T ss_pred CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccce-eEEecccHhhcccc---------cCCCcccC
Confidence 457899999832 22 44554 4888999999999987652 133 68889999999954 37799999
Q ss_pred CCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceec-------------ccCC-CcchhHHHHHHHHHHHhH-h
Q 045430 85 LPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFG-------------FSPY-SMMNVVGTLCVYAAICKH-E 149 (309)
Q Consensus 85 ~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyG-------------p~~~-~~~~~~~~~~i~~~l~~~-~ 149 (309)
.|..|. +-|+..|+- + -|.++-..--|+ |+.+ |+. +..|-.++.|. +
T Consensus 176 TPFyPR--SPYa~aKmy--------~----~WivvNyREAYnmfAcNGILFNHESPRRGenFV----TRKItRsvakI~~ 237 (376)
T KOG1372|consen 176 TPFYPR--SPYAAAKMY--------G----YWIVVNYREAYNMFACNGILFNHESPRRGENFV----TRKITRSVAKISL 237 (376)
T ss_pred CCCCCC--ChhHHhhhh--------h----eEEEEEhHHhhcceeeccEeecCCCCccccchh----hHHHHHHHHHhhh
Confidence 988765 447666542 2 133333322222 2222 222 23444555552 2
Q ss_pred CCc-eeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCC
Q 045430 150 GVP-LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVR 228 (309)
Q Consensus 150 g~~-~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~ 228 (309)
|+. -...|+-. ..||+-++.|-++|+.+.++++. -+-|-|+.|+..|.+|+.+.--..+|....-- +.-..
T Consensus 238 gqqe~~~LGNL~---a~RDWGhA~dYVEAMW~mLQ~d~--PdDfViATge~hsVrEF~~~aF~~ig~~l~We---g~gv~ 309 (376)
T KOG1372|consen 238 GQQEKIELGNLS---ALRDWGHAGDYVEAMWLMLQQDS--PDDFVIATGEQHSVREFCNLAFAEIGEVLNWE---GEGVD 309 (376)
T ss_pred cceeeEEecchh---hhcccchhHHHHHHHHHHHhcCC--CCceEEecCCcccHHHHHHHHHHhhCcEEeec---ccccc
Confidence 332 23457766 78999999999999877776653 36999999999999999998888888432210 00000
Q ss_pred HHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHH----HHH
Q 045430 229 LEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWID----KMK 303 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~----~~r 303 (309)
. +. +..-|.-.-.++. ..+..... --.+-|.+||++ |||+|++...+-.++.++ -||
T Consensus 310 ~---~~---------~n~~g~v~V~v~~-kYyRPtEV-----d~LqGdasKAk~~LgW~pkv~f~eLVkeMv~~DieLm~ 371 (376)
T KOG1372|consen 310 E---VG---------KNDDGVVRVKVDP-KYYRPTEV-----DTLQGDASKAKKTLGWKPKVTFPELVKEMVASDIELMK 371 (376)
T ss_pred c---cc---------ccCCceEEEEecc-cccCcchh-----hhhcCChHHHHHhhCCCCccCHHHHHHHHHHhHHHHHh
Confidence 0 00 0000000000000 00000000 024679999987 799999998887776653 455
Q ss_pred HCC
Q 045430 304 TYR 306 (309)
Q Consensus 304 ~~~ 306 (309)
.+.
T Consensus 372 ~np 374 (376)
T KOG1372|consen 372 RNP 374 (376)
T ss_pred hCC
Confidence 543
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.5e-09 Score=92.45 Aligned_cols=155 Identities=9% Similarity=-0.057 Sum_probs=90.7
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHH----HHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAM----LRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~g----t~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|+.... +.++.+++|+.+ ++++++++++. +.+|||++||...+...
T Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~iss~~~~~~~--------- 147 (258)
T PRK12429 79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ--GGGRIINMASVHGLVGS--------- 147 (258)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc--CCeEEEEEcchhhccCC---------
Confidence 3578999999983211 224467899999 55555555554 57899999997555321
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.. ..+. ..++.+.+.+++.++.+ ..+ +.++++||+.|+||.....+. ......+.+..
T Consensus 148 ~~-----~~~y---~~~k~a~~~~~~~l~~~~~~~~---i~v~~~~pg~v~~~~~~~~~~---------~~~~~~~~~~~ 207 (258)
T PRK12429 148 AG-----KAAY---VSAKHGLIGLTKVVALEGATHG---VTVNAICPGYVDTPLVRKQIP---------DLAKERGISEE 207 (258)
T ss_pred CC-----cchh---HHHHHHHHHHHHHHHHHhcccC---eEEEEEecCCCcchhhhhhhh---------hhccccCCChH
Confidence 00 0000 12344445444433321 246 999999999999986432111 00000011100
Q ss_pred -----ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 -----FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 -----~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..+... ..+++++++|+|+++++++..+ ...|+.|++.+|-
T Consensus 208 ~~~~~~~~~~~---~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 208 EVLEDVLLPLV---PQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGW 255 (258)
T ss_pred HHHHHHHhccC---CccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence 011111 3357999999999988887643 3458999999873
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.6e-08 Score=90.53 Aligned_cols=164 Identities=11% Similarity=-0.007 Sum_probs=103.8
Q ss_pred CCCCccEEEEeecccCC------ChHH---HHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP------TEAE---NCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~~~~---~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|+|||+|+...+ ++++ ..++|+.++.++++++... ..+.++||++||...+...
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 143 (257)
T PRK07074 74 ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL---------- 143 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC----------
Confidence 33568999999984321 2333 3579999999999888431 0135789999996433210
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.. +. ..+|.+.+.+++.++.+ ..+ +.++++||+.|+++.......... .++..
T Consensus 144 ~~---------~~y~~sK~a~~~~~~~~a~~~~~~g---i~v~~v~pg~v~t~~~~~~~~~~~--~~~~~---------- 199 (257)
T PRK07074 144 GH---------PAYSAAKAGLIHYTKLLAVEYGRFG---IRANAVAPGTVKTQAWEARVAANP--QVFEE---------- 199 (257)
T ss_pred CC---------cccHHHHHHHHHHHHHHHHHHhHhC---eEEEEEEeCcCCcchhhcccccCh--HHHHH----------
Confidence 10 11 23466666666655532 246 999999999999875322111000 00000
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHHHHHHHH
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKHLWKVLA 210 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~el~~~i~ 210 (309)
...+....++++++|+++++++++..+ ...|+.+++.+|...+..|+.+.+.
T Consensus 200 ----~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~ 253 (257)
T PRK07074 200 ----LKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLT 253 (257)
T ss_pred ----HHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhc
Confidence 000112357899999999999988643 3459999999999998888887763
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.4e-09 Score=92.21 Aligned_cols=158 Identities=17% Similarity=0.169 Sum_probs=97.7
Q ss_pred CCCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
...++|+|||+|+... .++.+.+++|+.|+.++++++......-.|||++||...+.. +..+..
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~-------------~~~~~~ 147 (248)
T PRK07806 81 EFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFI-------------PTVKTM 147 (248)
T ss_pred hCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcC-------------ccccCC
Confidence 3457899999997432 255667899999999999999864212258999999643211 111222
Q ss_pred CCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCc-cc
Q 045430 86 PRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK-DC 161 (309)
Q Consensus 86 p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~-~~ 161 (309)
|.... ..+|...|.+++.++.+ ..+ +.+++++|+.+-|+-...+. .+ .. ++.. ..
T Consensus 148 ~~~~~Y~~sK~a~e~~~~~l~~~~~~~~---i~v~~v~pg~~~~~~~~~~~------------~~--~~----~~~~~~~ 206 (248)
T PRK07806 148 PEYEPVARSKRAGEDALRALRPELAEKG---IGFVVVSGDMIEGTVTATLL------------NR--LN----PGAIEAR 206 (248)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhhccC---eEEEEeCCccccCchhhhhh------------cc--CC----HHHHHHH
Confidence 21101 13466667666665432 246 89999998877654211100 00 00 0100 00
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcc
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVF 200 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~ 200 (309)
+.....+++++|+|++++.++..+...|++|||++++.+
T Consensus 207 ~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~~ 245 (248)
T PRK07806 207 REAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGADYF 245 (248)
T ss_pred HhhhcccCCHHHHHHHHHHHhhccccCccEEEecCccce
Confidence 011236889999999999999876678999999998754
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1e-07 Score=86.44 Aligned_cols=169 Identities=8% Similarity=0.017 Sum_probs=103.7
Q ss_pred CCCccEEEEeecccC---C----C---hHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASR---P----T---EAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~---~----~---~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..++|+|||+|+... + + +.+.+++|+.++.++++++.+.. .+-.+||++||...+...
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 153 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH---------- 153 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC----------
Confidence 346899999998321 1 2 34467899999999998875431 123589999998766421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
| .... ..+|.+.|.+++.+..+ ..+ +.++++||+.|.++-....... . ....-. ....|
T Consensus 154 --~------~~~~Y~~sK~a~~~~~~~~~~~~~~~~---i~v~~i~Pg~v~t~~~~~~~~~-~---~~~~~~-~~~~~-- 215 (276)
T PRK05875 154 --R------WFGAYGVTKSAVDHLMKLAADELGPSW---VRVNSIRPGLIRTDLVAPITES-P---ELSADY-RACTP-- 215 (276)
T ss_pred --C------CCcchHHHHHHHHHHHHHHHHHhcccC---eEEEEEecCccCCccccccccC-H---HHHHHH-HcCCC--
Confidence 1 0011 13466666666665542 245 9999999999977643211110 0 000000 00111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCcc----cHHHHHHHHHHHhccc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDVF----KWKHLWKVLAEQFEIE 216 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~~----s~~el~~~i~~~~G~~ 216 (309)
...+.+++|+|+++++++..+. ..|++||+.+|..+ +..|+.+.+....|..
T Consensus 216 ----------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 273 (276)
T PRK05875 216 ----------LPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR 273 (276)
T ss_pred ----------CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence 1234569999999998887643 34899999998776 7777777766555543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.3e-09 Score=92.73 Aligned_cols=167 Identities=16% Similarity=0.214 Sum_probs=100.3
Q ss_pred cCCCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
+.++|+|.||.+-.... ..-.....|+++||+++ +|||||+.|-...+- +....
T Consensus 60 ~al~g~d~v~~~~~~~~-------~~~~~~~~~li~Aa~~a--gVk~~v~ss~~~~~~-----------------~~~~~ 113 (233)
T PF05368_consen 60 AALKGVDAVFSVTPPSH-------PSELEQQKNLIDAAKAA--GVKHFVPSSFGADYD-----------------ESSGS 113 (233)
T ss_dssp HHHTTCSEEEEESSCSC-------CCHHHHHHHHHHHHHHH--T-SEEEESEESSGTT-----------------TTTTS
T ss_pred HHHcCCceEEeecCcch-------hhhhhhhhhHHHhhhcc--ccceEEEEEeccccc-----------------ccccc
Confidence 34567899997766332 23456678999999998 799999765442221 11111
Q ss_pred CCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcccccccee
Q 045430 88 LNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSV 167 (309)
Q Consensus 88 ~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~ 167 (309)
.|. ...+.....+.++.++ .+ ++||++||+.-+........... .+ +.....+.++++++ ....
T Consensus 114 ~p~-~~~~~~k~~ie~~l~~-~~---i~~t~i~~g~f~e~~~~~~~~~~-------~~-~~~~~~~~~~~~~~---~~~~ 177 (233)
T PF05368_consen 114 EPE-IPHFDQKAEIEEYLRE-SG---IPYTIIRPGFFMENLLPPFAPVV-------DI-KKSKDVVTLPGPGN---QKAV 177 (233)
T ss_dssp TTH-HHHHHHHHHHHHHHHH-CT---SEBEEEEE-EEHHHHHTTTHHTT-------CS-CCTSSEEEEETTST---SEEE
T ss_pred ccc-chhhhhhhhhhhhhhh-cc---ccceeccccchhhhhhhhhcccc-------cc-cccceEEEEccCCC---cccc
Confidence 122 1123222233333333 47 99999999975543221111000 01 10111355666655 3344
Q ss_pred c-cCHHHHHHHHHHHhcCCCC--CCcceeecCCCcccHHHHHHHHHHHhcccc
Q 045430 168 A-SDADLIAEQHIWAAVDPYA--RNEAFNCSNGDVFKWKHLWKVLAEQFEIEN 217 (309)
Q Consensus 168 ~-~~vd~la~a~i~aa~~~~a--~g~~fNI~~g~~~s~~el~~~i~~~~G~~~ 217 (309)
+ ++.+|++++...++.+|.. .|+.++++. +.+|++|+.+.+.+.+|.+.
T Consensus 178 ~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 178 PVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp EEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHHTSEE
T ss_pred ccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHHCCcc
Confidence 4 5999999998888887643 478888875 88999999999999999764
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.8e-08 Score=87.91 Aligned_cols=150 Identities=10% Similarity=0.036 Sum_probs=92.3
Q ss_pred CCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
.++|+|||+|+.... + .+..+++|+.++.++++++.+......+||++||..+|... .
T Consensus 89 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~----------~--- 155 (254)
T PRK12746 89 SEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF----------T--- 155 (254)
T ss_pred CCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC----------C---
Confidence 368999999984221 1 24456899999999999987642233589999998777521 0
Q ss_pred CCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 82 TEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 82 ~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
...++ ..+|++.+.+++.+..+ ..+ +.++++||+.|+++-.......- -+..+.. ..
T Consensus 156 -~~~~Y---~~sK~a~~~~~~~~~~~~~~~~---i~v~~v~pg~~~t~~~~~~~~~~----~~~~~~~----------~~ 214 (254)
T PRK12746 156 -GSIAY---GLSKGALNTMTLPLAKHLGERG---ITVNTIMPGYTKTDINAKLLDDP----EIRNFAT----------NS 214 (254)
T ss_pred -CCcch---HhhHHHHHHHHHHHHHHHhhcC---cEEEEEEECCccCcchhhhccCh----hHHHHHH----------hc
Confidence 00010 13466666665544432 246 99999999999987532211100 0000000 00
Q ss_pred cccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCC
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNG 197 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g 197 (309)
. ....+++++|+++++.+++..+. ..|++|||.+|
T Consensus 215 ~---~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 215 S---VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred C---CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 0 12345689999999887776542 35899999876
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.7e-08 Score=87.75 Aligned_cols=155 Identities=7% Similarity=-0.072 Sum_probs=96.5
Q ss_pred CCCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
+.++|+|||+|+.... +. ++.+++|+.++.++++++.+.-..-++||++||...|+.. .+
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~ 150 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA-----------YG 150 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC-----------CC
Confidence 4578999999984211 22 4567999999999999887542123589999998777521 00
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
. .. ..+|.+.|.++..++.+. .+ ..+.+++|+.|.++.......... ...+ . +...
T Consensus 151 ~-------~~Y~~sK~~~~~~~~~l~~~~~~~---i~v~~v~Pg~i~t~~~~~~~~~~~------~~~~----~--~~~~ 208 (252)
T PRK06077 151 L-------SIYGAMKAAVINLTKYLALELAPK---IRVNAIAPGFVKTKLGESLFKVLG------MSEK----E--FAEK 208 (252)
T ss_pred c-------hHHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeCCccChHHHhhhhccc------ccHH----H--HHHh
Confidence 0 00 134555565655555431 25 889999999998764322111000 0000 0 0001
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcc
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVF 200 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~ 200 (309)
.. ....+++++|+|++++.++..+...|++|||.+|..+
T Consensus 209 ~~---~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~~ 247 (252)
T PRK06077 209 FT---LMGKILDPEEVAEFVAAILKIESITGQVFVLDSGESL 247 (252)
T ss_pred cC---cCCCCCCHHHHHHHHHHHhCccccCCCeEEecCCeec
Confidence 00 1236799999999999988766677999999998653
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.5e-08 Score=87.79 Aligned_cols=162 Identities=12% Similarity=0.066 Sum_probs=93.3
Q ss_pred CCCccEEEEeeccc-CC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCC-ceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWAS-RP---------TEAENCEVNGAMLRNVLRSVIPN--APNL-RHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v-~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|.|||+|+.. .. +.++.+++|+.++.++++++... ..+. ++|+++||...+..
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~---------- 153 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG---------- 153 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC----------
Confidence 35789999999843 11 23567899999999999987431 1123 56888877533211
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.| ...+. ..+|...|.++..++.+ ..+ ++++++||++|+|+...+.+.. ..+..+.++.
T Consensus 154 --~~--~~~~y---~~~K~a~~~~~~~l~~~~~~~~---i~~~~l~pg~v~~~~~~~~~~~---------~~~~~~~~~~ 214 (264)
T PRK12829 154 --YP--GRTPY---AASKWAVVGLVKSLAIELGPLG---IRVNAILPGIVRGPRMRRVIEA---------RAQQLGIGLD 214 (264)
T ss_pred --CC--CCchh---HHHHHHHHHHHHHHHHHHhhcC---eEEEEEecCCcCChHHHHHhhh---------hhhccCCChh
Confidence 00 00000 13355556665555432 146 9999999999999865332210 0000011100
Q ss_pred -ecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcc
Q 045430 155 -FPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVF 200 (309)
Q Consensus 155 -~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~ 200 (309)
+.+..........+++++|+++++.+++.. +...|+.|||++|..+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~~ 263 (264)
T PRK12829 215 EMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVEY 263 (264)
T ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCccc
Confidence 000000000123578999999998877753 2346899999998753
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.72 E-value=6.8e-08 Score=85.78 Aligned_cols=151 Identities=12% Similarity=0.017 Sum_probs=93.8
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..+|+|||+|+.... ++.+.+++|+.++.++++++... ..+.++||++||...++.+ .
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~----------~- 150 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG----------Y- 150 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC----------C-
Confidence 468999999974221 33557899999999999987421 1146899999998666211 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
+ ..+. ..+|...+.++..++.+ ..+ ++++++||++++||...+...... . ..+ . .+.|+
T Consensus 151 ~------~~~~y~~sK~a~~~~~~~~~~~~~~~~---i~~~~i~pg~~~~~~~~~~~~~~~-~---~~~-~-~~~~~--- 212 (251)
T PRK12826 151 P------GLAHYAASKAGLVGFTRALALELAARN---ITVNSVHPGGVDTPMAGNLGDAQW-A---EAI-A-AAIPL--- 212 (251)
T ss_pred C------CccHHHHHHHHHHHHHHHHHHHHHHcC---eEEEEEeeCCCCcchhhhcCchHH-H---HHH-H-hcCCC---
Confidence 0 0001 13345555555554432 247 999999999999997643322110 0 011 0 11121
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..+++++|+++++..++..+ ...|+.|+|.+|..
T Consensus 213 ---------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~ 248 (251)
T PRK12826 213 ---------GRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGAT 248 (251)
T ss_pred ---------CCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence 13567899999988877653 24699999987653
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.2e-08 Score=87.95 Aligned_cols=161 Identities=10% Similarity=0.007 Sum_probs=96.4
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC---CCCceEEEEeCCcc-ccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA---PNLRHVCLQTGGKH-YVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~---~~v~r~v~~Ss~~v-YG~~~~~~~~~~~ 76 (309)
...+|+|+|+|+.... ++++.+++|+.++.++++++.... ..-.+||++||... +|.+
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------- 148 (257)
T PRK07067 78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA--------- 148 (257)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC---------
Confidence 4578999999984211 334568999999999999986420 01147999999632 2210
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh-HhCCc
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK-HEGVP 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~-~~g~~ 152 (309)
..+. ..+|.+.+.+++..+.+ ..+ +.++++||+.|+|+........ +..... ..+..
T Consensus 149 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~i~pg~v~t~~~~~~~~~------~~~~~~~~~~~~ 209 (257)
T PRK07067 149 ----------LVSHYCATKAAVISYTQSAALALIRHG---INVNAIAPGVVDTPMWDQVDAL------FARYENRPPGEK 209 (257)
T ss_pred ----------CCchhhhhHHHHHHHHHHHHHHhcccC---eEEEEEeeCcccchhhhhhhhh------hhhccCCCHHHH
Confidence 0011 13456666665554432 256 9999999999999753221110 000000 00000
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
....+.+. ....+.+++|+|+++++++..+ ...|++|||.+|+.+|
T Consensus 210 ~~~~~~~~---~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 210 KRLVGEAV---PLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred HHHHhhcC---CCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEeCC
Confidence 01112222 3467889999999999988753 2459999999887653
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.9e-07 Score=83.59 Aligned_cols=160 Identities=11% Similarity=-0.072 Sum_probs=94.9
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccc-cCCccccCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHY-VGPFESFGK 73 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vY-G~~~~~~~~ 73 (309)
..+.++|+|+|+|+...+ +.++.+++|+.++.++++++ ++. +.++||++||...+ |.+
T Consensus 77 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~------ 148 (280)
T PRK06914 77 KEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ--KSGKIINISSISGRVGFP------ 148 (280)
T ss_pred HhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCEEEEECcccccCCCC------
Confidence 344578999999984321 22446789999999888885 443 46899999996433 311
Q ss_pred CCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcch---hH----HH-HHHHH
Q 045430 74 IRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMN---VV----GT-LCVYA 143 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~---~~----~~-~~i~~ 143 (309)
. . .+. -.+|...+.+++..+.+ ..+ ++++++||+.++++....... .. .. ...+.
T Consensus 149 ----~--~---~~Y---~~sK~~~~~~~~~l~~~~~~~~---i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (280)
T PRK06914 149 ----G--L---SPY---VSSKYALEGFSESLRLELKPFG---IDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMK 213 (280)
T ss_pred ----C--C---chh---HHhHHHHHHHHHHHHHHhhhhC---CEEEEEecCCcccchhhccccccccccccccchHHHHH
Confidence 0 0 000 13455566655554421 247 999999999998873211000 00 00 00000
Q ss_pred HHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHH
Q 045430 144 AICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWK 203 (309)
Q Consensus 144 ~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~ 203 (309)
.+.. .... ....+.+++|+|+++++++.++.. +..||++++..+++.
T Consensus 214 ~~~~-------~~~~-----~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 214 KIQK-------HINS-----GSDTFGNPIDVANLIVEIAESKRP-KLRYPIGKGVKLMIL 260 (280)
T ss_pred HHHH-------HHhh-----hhhccCCHHHHHHHHHHHHcCCCC-CcccccCCchHHHHH
Confidence 1100 0001 123567899999999999987654 367999988877544
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.9e-07 Score=81.93 Aligned_cols=150 Identities=10% Similarity=0.040 Sum_probs=96.1
Q ss_pred CCccEEEEeecccC-----C-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASR-----P-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..+|+|||+|+... + ++++.+++|+.++.++++++... ..+-++||++||..+|+..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 152 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS--------- 152 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc---------
Confidence 46899999998421 0 23446789999999999998753 1124699999998776421
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. + -..+|.+.|.+++.+..+ ..+ +..++++|+.|..+......+.. +..... .+.+..
T Consensus 153 -~-------~---Y~~sK~a~~~~~~~l~~~~~~~~---i~v~~v~pg~~~t~~~~~~~~~~----~~~~~~--~~~~~~ 212 (250)
T PRK07774 153 -N-------F---YGLAKVGLNGLTQQLARELGGMN---IRVNAIAPGPIDTEATRTVTPKE----FVADMV--KGIPLS 212 (250)
T ss_pred -c-------c---cHHHHHHHHHHHHHHHHHhCccC---eEEEEEecCcccCccccccCCHH----HHHHHH--hcCCCC
Confidence 0 0 024567777776666543 246 99999999998877653322111 111111 122211
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
-+..++|+++++++++..+ ...|++||+.+|+.++
T Consensus 213 ------------~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 213 ------------RMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred ------------CCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence 1235789999998887653 2468999999987653
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.2e-07 Score=84.43 Aligned_cols=151 Identities=10% Similarity=0.026 Sum_probs=91.1
Q ss_pred CCCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
+.++|+|||+|+.... ++ ++.+++|+.++.++++++... ..+..+||++||...|+..
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~----------- 153 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR----------- 153 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----------
Confidence 4578999999984211 22 335799999999999886421 0135689999998777521
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
| .... ..+|...|.+++.++.. ..+ ++++++||+.+.++.......... ..+ +.+.. ..
T Consensus 154 -~------~~~~Y~~sK~a~~~l~~~~~~~~~~~g---i~v~~v~pG~~~t~~~~~~~~~~~-~~~---~~~~~----~~ 215 (274)
T PRK07775 154 -P------HMGAYGAAKAGLEAMVTNLQMELEGTG---VRASIVHPGPTLTGMGWSLPAEVI-GPM---LEDWA----KW 215 (274)
T ss_pred -C------CcchHHHHHHHHHHHHHHHHHHhcccC---eEEEEEeCCcccCcccccCChhhh-hHH---HHHHH----Hh
Confidence 1 0001 13466667666665542 136 999999998875542111111110 001 11100 01
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeec
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCS 195 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~ 195 (309)
.+. ....++++||+|++++.++.++. .+.+||+.
T Consensus 216 ~~~-----~~~~~~~~~dva~a~~~~~~~~~-~~~~~~~~ 249 (274)
T PRK07775 216 GQA-----RHDYFLRASDLARAITFVAETPR-GAHVVNME 249 (274)
T ss_pred ccc-----ccccccCHHHHHHHHHHHhcCCC-CCCeeEEe
Confidence 111 22568999999999998887653 46799998
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.3e-07 Score=82.25 Aligned_cols=158 Identities=11% Similarity=0.023 Sum_probs=97.6
Q ss_pred HHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CC-CceEEEEeCCccccCCcccc
Q 045430 4 QAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PN-LRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~-v~r~v~~Ss~~vYG~~~~~~ 71 (309)
.+.++...++|+|||+|+.... ++++.+++|+.++.++++++.+.. .+ .+|||++||...|...
T Consensus 69 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 144 (245)
T PRK07060 69 RAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL---- 144 (245)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC----
Confidence 3444445568999999984211 234456899999999999886531 11 3689999998766421
Q ss_pred CCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 72 GKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
.. ..+. ..+|...|.+++.++.+ ..+ ++++.+||++|+++.....+.... ....+..
T Consensus 145 -----~~-----~~~y---~~sK~a~~~~~~~~a~~~~~~~---i~v~~v~pg~v~~~~~~~~~~~~~---~~~~~~~-- 203 (245)
T PRK07060 145 -----PD-----HLAY---CASKAALDAITRVLCVELGPHG---IRVNSVNPTVTLTPMAAEAWSDPQ---KSGPMLA-- 203 (245)
T ss_pred -----CC-----CcHh---HHHHHHHHHHHHHHHHHHhhhC---eEEEEEeeCCCCCchhhhhccCHH---HHHHHHh--
Confidence 00 0000 13466677766665542 246 999999999999986432111100 0000000
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
. . ....+++++|++++++.++..+ ...|+.+++.+|.
T Consensus 204 --~--~--------~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 204 --A--I--------PLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY 242 (245)
T ss_pred --c--C--------CCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence 0 1 1134678999999999888754 3459999998764
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.4e-07 Score=82.37 Aligned_cols=150 Identities=13% Similarity=-0.008 Sum_probs=91.6
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
...+|+|||+|+.... .+++.+++|+.++.++++++.... .+-.+||++||...+.. .
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~ 150 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG-----------G 150 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC-----------C
Confidence 4568999999984221 335568999999999999986420 02368999999644321 1
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.+. .++ ..+|.+.+.+++....+ ..+ +.+++++|+.|.++........ ....+ . .
T Consensus 151 ~~~---~~Y---~~sK~a~~~~~~~l~~~~~~~~---i~v~~v~pg~v~t~~~~~~~~~-----~~~~~---~------~ 207 (247)
T PRK12935 151 FGQ---TNY---SAAKAGMLGFTKSLALELAKTN---VTVNAICPGFIDTEMVAEVPEE-----VRQKI---V------A 207 (247)
T ss_pred CCC---cch---HHHHHHHHHHHHHHHHHHHHcC---cEEEEEEeCCCcChhhhhccHH-----HHHHH---H------H
Confidence 000 010 13455555554444332 146 9999999999987542221110 00000 0 0
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCC-CCCcceeecCCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPY-ARNEAFNCSNGD 198 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~-a~g~~fNI~~g~ 198 (309)
+. ..+++.+++|+++++++++.... ..|+.|||.+|.
T Consensus 208 ~~-----~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 208 KI-----PKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred hC-----CCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence 11 23567899999999999886432 468999999874
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.4e-07 Score=80.09 Aligned_cols=150 Identities=11% Similarity=0.028 Sum_probs=92.1
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..+|.|+|+|+.... ++.+.+++|+.++.++++++... ..+.+|||++||...... ..
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-----------~~ 149 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-----------NP 149 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC-----------CC
Confidence 467999999974211 23456899999999999998531 115689999999743321 10
Q ss_pred CCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 80 PFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 80 p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
+. .+. ..+|...+.+++..+.+ ..+ +.++++||+.++|+........ +.+..... +
T Consensus 150 ~~---~~y---~~sk~~~~~~~~~l~~~~~~~~---i~~~~i~pg~~~~~~~~~~~~~---------~~~~~~~~--~-- 207 (246)
T PRK05653 150 GQ---TNY---SAAKAGVIGFTKALALELASRG---ITVNAVAPGFIDTDMTEGLPEE---------VKAEILKE--I-- 207 (246)
T ss_pred CC---cHh---HhHHHHHHHHHHHHHHHHhhcC---eEEEEEEeCCcCCcchhhhhHH---------HHHHHHhc--C--
Confidence 00 000 12355555555554432 246 9999999999999876421110 11100001 1
Q ss_pred CccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCc
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDV 199 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~ 199 (309)
....+++++|+++++.+++.. ....|+.|+|++|..
T Consensus 208 ------~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 245 (246)
T PRK05653 208 ------PLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGMY 245 (246)
T ss_pred ------CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence 113467789999998888754 234689999998863
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=7.9e-07 Score=79.39 Aligned_cols=152 Identities=10% Similarity=-0.019 Sum_probs=93.2
Q ss_pred CCccEEEEeecccC-----------CChHHHHHhHHHHHHHHHHHhCcC----C-C---CCceEEEEeCCccccCCcccc
Q 045430 11 TDVTHIFYVTWASR-----------PTEAENCEVNGAMLRNVLRSVIPN----A-P---NLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----------~~~~~~~~vNv~gt~nll~a~~~~----~-~---~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
..+|+|||+|+... .++++.+++|+.++.++++++... . . ..++||++||...+...
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 154 (256)
T PRK12745 79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---- 154 (256)
T ss_pred CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC----
Confidence 56899999998421 133456899999999999887432 1 1 16789999998665421
Q ss_pred CCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 72 GKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
. ...++ ..+|...|.+++.++.+ ..+ ++++++||+.|+++......... ..... .
T Consensus 155 ------~----~~~~Y---~~sK~a~~~~~~~l~~~~~~~g---i~v~~i~pg~v~t~~~~~~~~~~------~~~~~-~ 211 (256)
T PRK12745 155 ------P----NRGEY---CISKAGLSMAAQLFAARLAEEG---IGVYEVRPGLIKTDMTAPVTAKY------DALIA-K 211 (256)
T ss_pred ------C----CCccc---HHHHHHHHHHHHHHHHHHHHhC---CEEEEEecCCCcCccccccchhH------Hhhhh-h
Confidence 0 00111 13455566555555432 257 99999999999987543221111 01100 0
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
+ ..+ ...+.+++|+++++.+++... ...|++|||.+|...
T Consensus 212 ~-~~~----------~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 212 G-LVP----------MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred c-CCC----------cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence 1 111 134568899999988777543 245899999887543
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=8.7e-07 Score=81.67 Aligned_cols=154 Identities=12% Similarity=0.060 Sum_probs=95.7
Q ss_pred CCCCccEEEEeecccC--C--------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASR--P--------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.+.++|+|||+|+... . ++++.+++|+.|+.++++++...-..-.+||++||...|+.. ..
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~ 201 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS---------PT 201 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC---------CC
Confidence 3457899999998421 1 345578999999999999986531112589999999887532 01
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. ..+ ..+|.+.+.+++.++.+ ..+ +.+++|+|+.|.+|...+ .... . . + ...+...+
T Consensus 202 ~-----~~Y---~asK~a~~~~~~~la~el~~~g---I~v~~v~PG~i~t~~~~~~~~~~-~---~---~-~~~~~~~p- 261 (300)
T PRK06128 202 L-----LDY---ASTKAAIVAFTKALAKQVAEKG---IRVNAVAPGPVWTPLQPSGGQPP-E---K---I-PDFGSETP- 261 (300)
T ss_pred c-----hhH---HHHHHHHHHHHHHHHHHhhhcC---cEEEEEEECcCcCCCcccCCCCH-H---H---H-HHHhcCCC-
Confidence 0 000 13455556555554432 247 999999999999985322 1110 0 0 0 00111111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
...+...+|+++++++.+... ...|++|+|.+|..+
T Consensus 262 ---------~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 262 ---------MKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred ---------CCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence 123557889999988877643 235999999998754
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.3e-07 Score=79.32 Aligned_cols=143 Identities=13% Similarity=0.049 Sum_probs=91.6
Q ss_pred CCCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|.|||+|+.... + ..+.+++|+.++.++++++.+. ..+.+|||++||...|+.. .
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~ 149 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG----------P 149 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC----------C
Confidence 4478999999984211 2 2345789999999999987531 1147899999999887631 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
..+. ..+|...+.++...+.+ ..+ +.++++||+.|+++..... .+.
T Consensus 150 --------~~~~y~~sk~a~~~~~~~~a~~~~~~~---i~~~~i~pg~v~~~~~~~~------------------~~~-- 198 (239)
T PRK12828 150 --------GMGAYAAAKAGVARLTEALAAELLDRG---ITVNAVLPSIIDTPPNRAD------------------MPD-- 198 (239)
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHhhhcC---eEEEEEecCcccCcchhhc------------------CCc--
Confidence 0011 12344445555443321 246 9999999999998732100 010
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
+. ...+++++|+|+++++++..+ ...|+.+++.+|+..
T Consensus 199 -~~------~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~~~ 238 (239)
T PRK12828 199 -AD------FSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGVAL 238 (239)
T ss_pred -hh------hhcCCCHHHHHHHHHHHhCcccccccceEEEecCCEeC
Confidence 11 123678999999988888654 335899999987643
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.3e-06 Score=76.71 Aligned_cols=151 Identities=7% Similarity=-0.050 Sum_probs=88.9
Q ss_pred CCCCccEEEEeeccc---CC-------ChHHHHHhHHHHHHHHHH----HhCcCCCCCceEEEEeCCccccCCccccCCC
Q 045430 9 KLTDVTHIFYVTWAS---RP-------TEAENCEVNGAMLRNVLR----SVIPNAPNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~---~~-------~~~~~~~vNv~gt~nll~----a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
...++|+|||+|+.. .+ +.++.+++|+.++.++++ .+++. +..+||++||...|+..
T Consensus 81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~~sS~~~~~~~------- 151 (260)
T PRK12823 81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ--GGGAIVNVSSIATRGIN------- 151 (260)
T ss_pred HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCeEEEEcCccccCCC-------
Confidence 345789999999732 11 224456899987765544 44443 45789999998776521
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc---------chhHHHHHHHH
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM---------MNVVGTLCVYA 143 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~---------~~~~~~~~i~~ 143 (309)
.. ++ ..+|.+.+.+++.++.+ ..+ +.++++||++|++|..... ...... .+..
T Consensus 152 ---~~------~Y---~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~ 215 (260)
T PRK12823 152 ---RV------PY---SAAKGGVNALTASLAFEYAEHG---IRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQ-QIVD 215 (260)
T ss_pred ---CC------cc---HHHHHHHHHHHHHHHHHhcccC---cEEEEEecCccCCcchhhHHhhccccccccccHH-HHHH
Confidence 10 11 14566666666665542 146 9999999999999731100 000000 0001
Q ss_pred HHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 144 AICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 144 ~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.+. .+.|+. -+.+++|+|+++++++..+ ...|++|||.+|+
T Consensus 216 ~~~--~~~~~~------------~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 216 QTL--DSSLMK------------RYGTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred HHh--ccCCcc------------cCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 110 122221 2336899999988877543 2468999998775
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=9.2e-07 Score=90.72 Aligned_cols=159 Identities=10% Similarity=0.051 Sum_probs=97.6
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCC-ceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNL-RHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v-~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..++|+|||+|+.... .++..+++|+.|+.++++++.+. ..+. .+||++||...+... .
T Consensus 496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~---------~ 566 (681)
T PRK08324 496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG---------P 566 (681)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC---------C
Confidence 4579999999984321 23456899999999997777432 0033 689999997555311 0
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCcee-cccCCC-cchhHHHHHHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIF-GFSPYS-MMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~Vy-Gp~~~~-~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. ... ..+|-..+.+++.++.+ ..+ +.+++++|+.|| |.+... .+... . .+..+.+
T Consensus 567 ~---------~~~Y~asKaa~~~l~~~la~e~~~~g---Irvn~v~Pg~v~~~t~~~~~~~~~~-------~-~~~~g~~ 626 (681)
T PRK08324 567 N---------FGAYGAAKAAELHLVRQLALELGPDG---IRVNGVNPDAVVRGSGIWTGEWIEA-------R-AAAYGLS 626 (681)
T ss_pred C---------cHHHHHHHHHHHHHHHHHHHHhcccC---eEEEEEeCceeecCCccccchhhhh-------h-hhhccCC
Confidence 0 000 12345556666655542 245 999999999999 664321 11000 0 0111222
Q ss_pred e----eecCCccccccceeccCHHHHHHHHHHHhc--CCCCCCcceeecCCCcc
Q 045430 153 L----LFPGSKDCWEGYSVASDADLIAEQHIWAAV--DPYARNEAFNCSNGDVF 200 (309)
Q Consensus 153 ~----~~~G~~~~~~~~~~~~~vd~la~a~i~aa~--~~~a~g~~fNI~~g~~~ 200 (309)
. .+.+.+. ..+.+++++|+|+++++++. .....|++|||.+|..-
T Consensus 627 ~~~~~~~~~~~~---~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 627 EEELEEFYRARN---LLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred hHHHHHHHHhcC---CcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence 1 1233333 45788999999999998874 34566999999988654
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.1e-06 Score=76.21 Aligned_cols=150 Identities=13% Similarity=0.109 Sum_probs=90.7
Q ss_pred CCCccEEEEeecccCC----------ChHHHHHhHHHHHHHHHHHhCcCC-----CCCceEEEEeCCcc-ccCCccccCC
Q 045430 10 LTDVTHIFYVTWASRP----------TEAENCEVNGAMLRNVLRSVIPNA-----PNLRHVCLQTGGKH-YVGPFESFGK 73 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~-----~~v~r~v~~Ss~~v-YG~~~~~~~~ 73 (309)
...+|+|+|+|+.... ++++.+++|+.++.++++++.+.- ..-.+||++||... ||.+
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------ 151 (248)
T PRK06123 78 LGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP------ 151 (248)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC------
Confidence 3468999999984311 223568999999999988875431 00136999999754 4421
Q ss_pred CCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc-chhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM-MNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~~~~i~~~l~~~~g 150 (309)
.. . ..+ ..+|.+.+.+++..+.+ ..+ +.++++||++|+||..... .+. .+..+ + ..
T Consensus 152 ----~~-~---~~Y---~~sKaa~~~~~~~la~~~~~~~---i~v~~i~pg~v~~~~~~~~~~~~-----~~~~~-~-~~ 210 (248)
T PRK06123 152 ----GE-Y---IDY---AASKGAIDTMTIGLAKEVAAEG---IRVNAVRPGVIYTEIHASGGEPG-----RVDRV-K-AG 210 (248)
T ss_pred ----CC-c---cch---HHHHHHHHHHHHHHHHHhcccC---eEEEEEecCcccCchhhccCCHH-----HHHHH-H-hc
Confidence 10 0 000 13566677766655542 246 9999999999999853211 111 11111 1 12
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.|+.. ..+++|+++++++++... ...|+.|||.+|+
T Consensus 211 ~p~~~------------~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg~ 248 (248)
T PRK06123 211 IPMGR------------GGTAEEVARAILWLLSDEASYTTGTFIDVSGGR 248 (248)
T ss_pred CCCCC------------CcCHHHHHHHHHHHhCccccCccCCEEeecCCC
Confidence 23211 136789999999887643 2468999998653
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.3e-07 Score=80.83 Aligned_cols=157 Identities=12% Similarity=0.065 Sum_probs=92.7
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCC-CceEEEEeCCc-cccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APN-LRHVCLQTGGK-HYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~-v~r~v~~Ss~~-vYG~~~~~~~~~~~ 76 (309)
...+|.|||+|+.... ++++.+++|+.++.++++++.+. ..+ -.++|++||.. .||.+
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~--------- 149 (259)
T PRK12384 79 FGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK--------- 149 (259)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC---------
Confidence 3578999999984211 23446799999988887776542 113 25899998864 33321
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHhCCc-
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHEGVP- 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~g~~- 152 (309)
+..++ ..+|.+.+.+++..+.+ ..+ +.++++||+.|+++... +.++ .+. +..+.+
T Consensus 150 ------~~~~Y---~~sKaa~~~l~~~la~e~~~~g---i~v~~v~pg~~~~~~~~~~~~~------~~~---~~~~~~~ 208 (259)
T PRK12384 150 ------HNSGY---SAAKFGGVGLTQSLALDLAEYG---ITVHSLMLGNLLKSPMFQSLLP------QYA---KKLGIKP 208 (259)
T ss_pred ------CCchh---HHHHHHHHHHHHHHHHHHHHcC---cEEEEEecCCcccchhhhhhhH------HHH---HhcCCCh
Confidence 01111 13455555555444431 257 99999999999886431 1111 111 111110
Q ss_pred ---eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 ---LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ---~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
....+++. ..+.+++++|+++++++.+..+ ...|++|||.+|+.
T Consensus 209 ~~~~~~~~~~~---~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 209 DEVEQYYIDKV---PLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred HHHHHHHHHhC---cccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 01111222 4467889999999998777643 24699999999875
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.3e-06 Score=77.46 Aligned_cols=146 Identities=11% Similarity=0.044 Sum_probs=91.0
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC-----cCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI-----PNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~-----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
..++|.|||+|+.... ++...+++|+.++.++++++. +. +.++||++||...|...
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~iv~~sS~~~~~~~-------- 154 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR--RGGRIVNIASVAGVRGN-------- 154 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--CCeEEEEECCchhcCCC--------
Confidence 3578999999984321 234467999999999999987 33 46899999998776421
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
... .+. ..+|...+.+++..+.+ ..+ +.++++||+.|+++........ . .+.+ ..++
T Consensus 155 -~~~-----~~y---~~sK~a~~~~~~~l~~~~~~~~---i~~~~i~pg~v~t~~~~~~~~~------~-~~~~--~~~~ 213 (249)
T PRK12827 155 -RGQ-----VNY---AASKAGLIGLTKTLANELAPRG---ITVNAVAPGAINTPMADNAAPT------E-HLLN--PVPV 213 (249)
T ss_pred -CCC-----chh---HHHHHHHHHHHHHHHHHhhhhC---cEEEEEEECCcCCCcccccchH------H-HHHh--hCCC
Confidence 010 000 13455555555544432 246 9999999999999865332210 0 0101 1111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.-+..++|+++++++++... ...|+.+++.+|.
T Consensus 214 ------------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 214 ------------QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred ------------cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence 12346788999988777542 3458999997663
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.6e-06 Score=75.70 Aligned_cols=152 Identities=12% Similarity=0.055 Sum_probs=90.2
Q ss_pred CCCccEEEEeecccC------CC---hHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASR------PT---EAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~------~~---~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|+... .+ .++.+++|+.++.++++++. +. +.++||++||...|+..
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~ii~iss~~~~~~~--------- 146 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER--GAGRIVNIASDAARVGS--------- 146 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEECchhhccCC---------
Confidence 346899999997321 12 24468999999999988875 33 46899999998877632
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH-HHHHHHHHHHhHhCCc
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV-GTLCVYAAICKHEGVP 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~-~~~~i~~~l~~~~g~~ 152 (309)
... +. ..+|.+.+.+++.++.+ ..+ ++++++||+.++++.-....... ..-.+...+ . ...+
T Consensus 147 ~~~---------~~Y~~sK~a~~~~~~~la~~~~~~~---i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 212 (250)
T TIGR03206 147 SGE---------AVYAACKGGLVAFSKTMAREHARHG---ITVNVVCPGPTDTALLDDICGGAENPEKLREAF-T-RAIP 212 (250)
T ss_pred CCC---------chHHHHHHHHHHHHHHHHHHHhHhC---cEEEEEecCcccchhHHhhhhccCChHHHHHHH-H-hcCC
Confidence 010 11 13344445555544432 136 99999999999987422111000 000000011 0 1111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
. ..+...+|+|++++.++..+ ...|++|++.+|.
T Consensus 213 --~----------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 213 --L----------GRLGQPDDLPGAILFFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred --c----------cCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence 1 12345688999998887643 3469999998763
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.2e-06 Score=77.92 Aligned_cols=99 Identities=13% Similarity=0.050 Sum_probs=63.6
Q ss_pred CCCCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|+|||+|+.... + .++.+++|+.|+.++++++... ..+.+|||++||...+...
T Consensus 75 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~---------- 144 (277)
T PRK06180 75 TFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM---------- 144 (277)
T ss_pred HhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC----------
Confidence 34568999999984221 2 2445899999999999985321 1145799999998665421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceeccc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFS 128 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~ 128 (309)
| .... ..+|...|.+++..+.+ ..+ ++++++||+.|.++.
T Consensus 145 --~------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 145 --P------GIGYYCGSKFALEGISESLAKEVAPFG---IHVTAVEPGSFRTDW 187 (277)
T ss_pred --C------CcchhHHHHHHHHHHHHHHHHHhhhhC---cEEEEEecCCcccCc
Confidence 0 0000 12345555555444432 247 999999999998864
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=2e-06 Score=76.95 Aligned_cols=156 Identities=10% Similarity=0.007 Sum_probs=93.9
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+|||+|+.... +.++.+++|+.++.++++++.+.. .+.+|||++||...+...
T Consensus 84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------- 153 (255)
T PRK07523 84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR---------- 153 (255)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC----------
Confidence 34568999999984321 224457899999999999986531 135799999997443211
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
| ...+. ..+|.+.+.+++.++.+ ..+ +.++++||+.+.++.......... +...+.+ ..|
T Consensus 154 --~--~~~~y---~~sK~a~~~~~~~~a~e~~~~g---i~v~~i~pg~~~t~~~~~~~~~~~---~~~~~~~--~~~--- 215 (255)
T PRK07523 154 --P--GIAPY---TATKGAVGNLTKGMATDWAKHG---LQCNAIAPGYFDTPLNAALVADPE---FSAWLEK--RTP--- 215 (255)
T ss_pred --C--CCccH---HHHHHHHHHHHHHHHHHhhHhC---eEEEEEEECcccCchhhhhccCHH---HHHHHHh--cCC---
Confidence 0 00000 12344455555544431 257 999999999999975322111100 1111111 112
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
...+..++|+|+++++++..+ ...|+++++.+|..+|
T Consensus 216 ---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 216 ---------AGRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred ---------CCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 123557899999988888643 3458999999887654
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.4e-06 Score=75.99 Aligned_cols=153 Identities=8% Similarity=-0.058 Sum_probs=90.3
Q ss_pred CCCCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccc-cCCccccCCC
Q 045430 9 KLTDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHY-VGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vY-G~~~~~~~~~ 74 (309)
...++|+|||+|+.... +. ++.+++|+.++.++.+++ ++. +.++|+++||...+ |.+
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~ii~~sS~~~~~~~~------- 148 (252)
T PRK06138 78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ--GGGSIVNTASQLALAGGR------- 148 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--CCeEEEEECChhhccCCC-------
Confidence 34578999999984221 22 335789999997776665 443 46899999997444 321
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
.. +. ..+|...+.+++.++.+ ..+ +.++++||+.|+++.....+.....-..+...
T Consensus 149 ---~~---------~~Y~~sK~a~~~~~~~l~~~~~~~~---i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~------ 207 (252)
T PRK06138 149 ---GR---------AAYVASKGAIASLTRAMALDHATDG---IRVNAVAPGTIDTPYFRRIFARHADPEALREA------ 207 (252)
T ss_pred ---Cc---------cHHHHHHHHHHHHHHHHHHHHHhcC---eEEEEEEECCccCcchhhhhccccChHHHHHH------
Confidence 10 11 13456666665555432 146 99999999999998543221100000000000
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD 198 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~ 198 (309)
+.+. . ....+.+++|+++++++++..+. ..|+.+.+.+|.
T Consensus 208 ---~~~~-~---~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~ 249 (252)
T PRK06138 208 ---LRAR-H---PMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGGW 249 (252)
T ss_pred ---HHhc-C---CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence 0000 0 11235789999999999887643 458888887653
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=3e-06 Score=74.09 Aligned_cols=148 Identities=13% Similarity=0.038 Sum_probs=89.6
Q ss_pred HHHhccCCCCccEEEEeecccCC------C---hHHHHHhHHHH----HHHHHHHhCcCCCCCceEEEEeCCccccCCcc
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP------T---EAENCEVNGAM----LRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~------~---~~~~~~vNv~g----t~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~ 69 (309)
+++.+..+.++|+|||+|+.... + +.+.+++|+.+ ++++++++++. .+|+|++||...++..
T Consensus 62 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~v~~ss~~~~~~~-- 136 (227)
T PRK08219 62 IAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---HGHVVFINSGAGLRAN-- 136 (227)
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEcchHhcCcC--
Confidence 44555566679999999984321 2 23457899988 66666666553 4789999998777532
Q ss_pred ccCCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 70 SFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
... .+ -..+|+..+.++..++....+. +.++.++|+.+.++..... ....
T Consensus 137 -------~~~-----~~---y~~~K~a~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~-------------~~~~ 186 (227)
T PRK08219 137 -------PGW-----GS---YAASKFALRALADALREEEPGN--VRVTSVHPGRTDTDMQRGL-------------VAQE 186 (227)
T ss_pred -------CCC-----ch---HHHHHHHHHHHHHHHHHHhcCC--ceEEEEecCCccchHhhhh-------------hhhh
Confidence 010 00 0234666776666654421121 7888888887655432111 0111
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSN 196 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~ 196 (309)
+.. . ....+++++|++++++.++.++ ..+.+||+.-
T Consensus 187 ~~~--~--------~~~~~~~~~dva~~~~~~l~~~-~~~~~~~~~~ 222 (227)
T PRK08219 187 GGE--Y--------DPERYLRPETVAKAVRFAVDAP-PDAHITEVVV 222 (227)
T ss_pred ccc--c--------CCCCCCCHHHHHHHHHHHHcCC-CCCccceEEE
Confidence 111 1 1135688999999999888765 3568888863
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.41 E-value=6e-06 Score=72.64 Aligned_cols=147 Identities=10% Similarity=0.023 Sum_probs=88.6
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCc-cccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGK-HYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~-vYG~~~~~~~~~~~~~ 78 (309)
..+|.|+|+|+.... ++++.+++|+.++.++++++.... .+.++||++||.. +||.+ .
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~----------~ 144 (239)
T TIGR01830 75 GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA----------G 144 (239)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC----------C
Confidence 468999999984321 335568999999999999986531 1457999999964 45432 1
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
. ... ..+|...+.+++..+.+ ..+ +.++++||+.+.++........ ....+. ...+ +
T Consensus 145 ~-----~~y---~~~k~a~~~~~~~l~~~~~~~g---~~~~~i~pg~~~~~~~~~~~~~-----~~~~~~--~~~~--~- 203 (239)
T TIGR01830 145 Q-----ANY---AASKAGVIGFTKSLAKELASRN---ITVNAVAPGFIDTDMTDKLSEK-----VKKKIL--SQIP--L- 203 (239)
T ss_pred C-----chh---HHHHHHHHHHHHHHHHHHhhcC---eEEEEEEECCCCChhhhhcChH-----HHHHHH--hcCC--c-
Confidence 0 000 12345455555444332 246 9999999998876533222111 111111 1112 1
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
.-+.+++|+++++++++..+ ...|++|||..|
T Consensus 204 ---------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 204 ---------GRFGTPEEVANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred ---------CCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 11346899999988888543 356899999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.6e-06 Score=76.66 Aligned_cols=150 Identities=15% Similarity=0.003 Sum_probs=87.1
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+|||+|+.... ++++.+++|+.|+.++++++. +.+ .-.+||++||...|...
T Consensus 80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~-~~g~iv~isS~~~~~~~-------- 150 (275)
T PRK05876 80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQG-TGGHVVFTASFAGLVPN-------- 150 (275)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCChhhccCC--------
Confidence 34568999999984211 234467999999999999874 221 13689999998766421
Q ss_pred CCCCCCCCCCCCCCc-ccchHH----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYT----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
. .... ..+|.+ .|.+..|+.. .+ +.+++++|+.|.++...+..... .......
T Consensus 151 --~--------~~~~Y~asK~a~~~~~~~l~~e~~~--~g---i~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~~ 208 (275)
T PRK05876 151 --A--------GLGAYGVAKYGVVGLAETLAREVTA--DG---IGVSVLCPMVVETNLVANSERIR-------GAACAQS 208 (275)
T ss_pred --C--------CCchHHHHHHHHHHHHHHHHHHhhh--cC---cEEEEEEeCccccccccchhhhc-------Ccccccc
Confidence 0 0000 123443 2223333322 47 99999999999887543221100 0000001
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSN 196 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~ 196 (309)
......|... ..+++++++|+|+.++.++.+ |+.|.+.+
T Consensus 209 ~~~~~~~~~~---~~~~~~~~~dva~~~~~ai~~----~~~~~~~~ 247 (275)
T PRK05876 209 STTGSPGPLP---LQDDNLGVDDIAQLTADAILA----NRLYVLPH 247 (275)
T ss_pred cccccccccc---ccccCCCHHHHHHHHHHHHHc----CCeEEecC
Confidence 1112233333 346788999999999888754 45666653
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.4e-06 Score=75.68 Aligned_cols=153 Identities=12% Similarity=-0.006 Sum_probs=94.2
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCC--CCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAP--NLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~--~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
...+|+|||+|+.... ++++.+++|+.++.++++++..... .-.++|++||...+...
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~----------- 153 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN----------- 153 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC-----------
Confidence 3468999999984211 2355789999999999998865421 23578888776544311
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
|.. .++ ..+|.+.|.+.+.++.+. .+ +.++.++|+.|+....... ..|....+ +.+ .|
T Consensus 154 -p~~--~~Y---~~sK~a~~~~~~~la~~~~~~---i~v~~i~PG~v~t~~~~~~-------~~~~~~~~--~~~---~~ 212 (258)
T PRK09134 154 -PDF--LSY---TLSKAALWTATRTLAQALAPR---IRVNAIGPGPTLPSGRQSP-------EDFARQHA--ATP---LG 212 (258)
T ss_pred -CCc--hHH---HHHHHHHHHHHHHHHHHhcCC---cEEEEeecccccCCcccCh-------HHHHHHHh--cCC---CC
Confidence 100 000 134555555555554421 24 8899999998876432211 11111111 111 11
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHH
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWK 203 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~ 203 (309)
....++|+|++++.++.++...|+.|++.+|..++|.
T Consensus 213 ---------~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 213 ---------RGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred ---------CCcCHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence 1256899999999999877778999999999877665
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.7e-06 Score=79.40 Aligned_cols=153 Identities=11% Similarity=0.082 Sum_probs=94.2
Q ss_pred CCCCccEEEEeeccc-C--C----C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 9 KLTDVTHIFYVTWAS-R--P----T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~-~--~----~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
....+|+|||+|+.. . . + +.+.+++|+.++.++++++...-..-.+||++||...|... ..
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~---------~~ 191 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN---------ET 191 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC---------CC
Confidence 345689999999842 1 1 2 24468999999999999987531012589999999887532 01
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
. ..+ ..+|.+.+.+++..+.+ ..+ +.++.+||+.|+.+.-...... . .+.. .
T Consensus 192 ~-----~~Y---~~sK~a~~~l~~~la~~~~~~g---Irv~~i~pG~v~T~~~~~~~~~-~------~~~~-~------- 245 (290)
T PRK06701 192 L-----IDY---SATKGAIHAFTRSLAQSLVQKG---IRVNAVAPGPIWTPLIPSDFDE-E------KVSQ-F------- 245 (290)
T ss_pred c-----chh---HHHHHHHHHHHHHHHHHhhhcC---eEEEEEecCCCCCcccccccCH-H------HHHH-H-------
Confidence 0 000 13455555555554442 146 9999999999988743211110 0 0000 0
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+... ....+..++|+|+++++.+... ...|+.|+|.+|..
T Consensus 246 ~~~~---~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~~ 287 (290)
T PRK06701 246 GSNT---PMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGVI 287 (290)
T ss_pred HhcC---CcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCcc
Confidence 1111 2235678899999988877643 24689999988753
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.36 E-value=4.9e-06 Score=73.43 Aligned_cols=149 Identities=13% Similarity=0.050 Sum_probs=88.0
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCc-cccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGK-HYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~-vYG~~~~~~~~~~~~ 77 (309)
..++|+|||+|+.... .+++.+.+|+.++.++++++.... .+.+|||++||.. +||.+
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~---------- 150 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP---------- 150 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC----------
Confidence 3468999999984221 223457899999999999987531 1357899999963 33321
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. . .+ -..+|...+.+++.++.+ ..+ +.++++||+.|.++...+...... .... ...+.
T Consensus 151 ~--~---~~---y~~sk~a~~~~~~~~a~~~~~~~---i~~~~v~pg~~~~~~~~~~~~~~~------~~~~-~~~~~-- 210 (248)
T PRK05557 151 G--Q---AN---YAASKAGVIGFTKSLARELASRG---ITVNAVAPGFIETDMTDALPEDVK------EAIL-AQIPL-- 210 (248)
T ss_pred C--C---ch---hHHHHHHHHHHHHHHHHHhhhhC---eEEEEEecCccCCccccccChHHH------HHHH-hcCCC--
Confidence 1 0 00 013345555555444331 246 999999999886654332211110 0000 11111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
..+.+++|+++++.+++.. ....|+.|||.+|-
T Consensus 211 ----------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 211 ----------GRLGQPEEIASAVAFLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred ----------CCCcCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence 1345789999998877754 33568999998763
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.6e-06 Score=77.55 Aligned_cols=160 Identities=10% Similarity=0.045 Sum_probs=93.7
Q ss_pred CCCCccEEEEeeccc-C--C-------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWAS-R--P-------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~-~--~-------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.+..+|+|||+|+.. . + ++++.+++|+.++.++++++.... ..-++||++||...+... .
T Consensus 79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~---------~ 149 (258)
T PRK07890 79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ---------P 149 (258)
T ss_pred HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC---------C
Confidence 445789999999842 1 1 234568999999999999986431 012589999997554321 0
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .+. ..+|.+.+.+++.++.+ ..+ +.++++||+.|+||...+.+.. ..+..+.+..
T Consensus 150 ~---------~~~Y~~sK~a~~~l~~~~a~~~~~~~---i~v~~v~pg~v~~~~~~~~~~~---------~~~~~~~~~~ 208 (258)
T PRK07890 150 K---------YGAYKMAKGALLAASQSLATELGPQG---IRVNSVAPGYIWGDPLKGYFRH---------QAGKYGVTVE 208 (258)
T ss_pred C---------cchhHHHHHHHHHHHHHHHHHHhhcC---cEEEEEeCCccCcHHHHHHhhh---------cccccCCCHH
Confidence 0 011 24466666666655532 246 9999999999999864322110 0010000000
Q ss_pred -ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 -FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 -~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+...-........+.+++|+++++++++... ...|+++.+..|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 209 QIYAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred HHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence 0000000012234678999999998888642 3458887777664
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.5e-06 Score=76.14 Aligned_cols=150 Identities=12% Similarity=0.028 Sum_probs=85.3
Q ss_pred CCccEEEEeecccC---------CC---hHHHHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccccCCccccCCC
Q 045430 11 TDVTHIFYVTWASR---------PT---EAENCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---------~~---~~~~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
.++|+|||+|+... .+ ....+++|+.++.+++++ +++. +.+|||++||...+..+
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~~sS~~~~~~~------- 152 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ--GGGNLVNISSIYGVVAP------- 152 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc--CCceEEEEechhhhccc-------
Confidence 45899999996321 12 244578888776655544 4443 46799999997655422
Q ss_pred CCCCCCCCCCCCCCC-cc--cchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 75 RPHDTPFTEDLPRLN-VT--NFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p-~p--~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
..+..|+.+..+ .. .+|.+.+.+.+..+.+ ..+ +.+++++|+.++++.+... ... .+
T Consensus 153 ---~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~---i~v~~i~Pg~~~~~~~~~~---------~~~-~~-- 214 (256)
T PRK09186 153 ---KFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSN---IRVNCVSPGGILDNQPEAF---------LNA-YK-- 214 (256)
T ss_pred ---cchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCC---eEEEEEecccccCCCCHHH---------HHH-HH--
Confidence 112233332211 11 2344444444433331 246 9999999999887532111 001 11
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
. .. ++ ..++.++|+|+++++++..+ ...|+.+++.+|.
T Consensus 215 ~-~~--~~--------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 254 (256)
T PRK09186 215 K-CC--NG--------KGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF 254 (256)
T ss_pred h-cC--Cc--------cCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence 0 11 11 23567899999999888643 2458888888774
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=7.5e-06 Score=71.92 Aligned_cols=160 Identities=9% Similarity=0.008 Sum_probs=94.9
Q ss_pred HHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
+.+.+..+..+|++||+|+.... +.++.+++|+.++.+++++.... +.++||++||...|+..
T Consensus 60 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~g~iv~~ss~~~~~~~------ 131 (230)
T PRK07041 60 VDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA--PGGSLTFVSGFAAVRPS------ 131 (230)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc--CCeEEEEECchhhcCCC------
Confidence 44555556678999999984211 34557899999999999966543 46899999998777521
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
.. .+. ..+|.+.+.+.+..+.+..+ +..+.++|+.|-.+...+.... .....+... + ...+
T Consensus 132 ---~~---------~~~Y~~sK~a~~~~~~~la~e~~~---irv~~i~pg~~~t~~~~~~~~~-~~~~~~~~~-~-~~~~ 193 (230)
T PRK07041 132 ---AS---------GVLQGAINAALEALARGLALELAP---VRVNTVSPGLVDTPLWSKLAGD-AREAMFAAA-A-ERLP 193 (230)
T ss_pred ---Cc---------chHHHHHHHHHHHHHHHHHHHhhC---ceEEEEeecccccHHHHhhhcc-chHHHHHHH-H-hcCC
Confidence 00 001 12345555555555543234 7788888887755421110000 000011111 0 1111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVF 200 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~ 200 (309)
. . -+...+|+|+++++++..+...|+.|+|.+|..+
T Consensus 194 --~--~--------~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg~~~ 229 (230)
T PRK07041 194 --A--R--------RVGQPEDVANAILFLAANGFTTGSTVLVDGGHAI 229 (230)
T ss_pred --C--C--------CCcCHHHHHHHHHHHhcCCCcCCcEEEeCCCeec
Confidence 1 0 1235789999999888765566999999988653
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=8.5e-06 Score=72.43 Aligned_cols=151 Identities=7% Similarity=-0.066 Sum_probs=91.4
Q ss_pred CCccEEEEeecccC--C----Ch---HHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR--P----TE---AENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~--~----~~---~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..+|+|||+|+... + +. +..+++|+.++.++++++.+.. .+.++||++||...+... ..
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------~~- 150 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL---------EN- 150 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC---------CC-
Confidence 46899999998422 1 22 2246899999999998886531 135699999997544311 00
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.+. ..+|...|.+++..+.+ ..+ +.++++||+.|..+.......... +.... .. ..+.
T Consensus 151 --------~~~y~~sK~a~~~~~~~~~~~~~~~~---i~v~~i~pg~v~t~~~~~~~~~~~---~~~~~---~~-~~~~- 211 (250)
T PRK08063 151 --------YTTVGVSKAALEALTRYLAVELAPKG---IAVNAVSGGAVDTDALKHFPNREE---LLEDA---RA-KTPA- 211 (250)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHHhHhC---eEEEeEecCcccCchhhhccCchH---HHHHH---hc-CCCC-
Confidence 001 13456666666555432 246 999999999998765322111000 00011 00 1110
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~ 199 (309)
..++.++|+|+++++++..+. ..|+.|++.+|..
T Consensus 212 ---------~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 212 ---------GRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred ---------CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence 135678999999998886542 4589999988764
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.7e-06 Score=75.91 Aligned_cols=152 Identities=9% Similarity=-0.005 Sum_probs=88.1
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHH----hCcCC----CCCceEEEEeCCccccCCccccC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRS----VIPNA----PNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a----~~~~~----~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
..++|+|||+|+.... +++..+++|+.|+.+++++ +.+.. ....++|++||...|...
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----- 155 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP----- 155 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----
Confidence 3468999999985321 2234589999999996666 33221 112589999998776521
Q ss_pred CCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCC--CcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 73 KIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKG--PLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~--~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
.. .+. ..+|.+.+.++..+..+ .+ ...+.+..+.|+.|. +.+.. ...
T Consensus 156 ----~~---------~~~Y~~sK~a~~~~~~~l~~e-~~~~~~~irv~~v~pg~i~----t~~~~------------~~~ 205 (287)
T PRK06194 156 ----PA---------MGIYNVSKHAVVSLTETLYQD-LSLVTDQVGASVLCPYFVP----TGIWQ------------SER 205 (287)
T ss_pred ----CC---------CcchHHHHHHHHHHHHHHHHH-HhhcCCCeEEEEEEeCccc----Ccccc------------ccc
Confidence 00 011 13455566665555442 22 000334444443322 12211 112
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhcc
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEI 215 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~ 215 (309)
+.+..+.|++. +++++.|++|.+++.+.. + .++..|+.+.+.+.++.
T Consensus 206 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-------~---------~~s~~dva~~i~~~~~~ 252 (287)
T PRK06194 206 NRPADLANTAP---PTRSQLIAQAMSQKAVGS-------G---------KVTAEEVAQLVFDAIRA 252 (287)
T ss_pred cCchhcccCcc---ccchhhHHHHHHHhhhhc-------c---------CCCHHHHHHHHHHHHHc
Confidence 44666677776 779999999988764321 1 17889999999887753
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.8e-05 Score=70.86 Aligned_cols=153 Identities=10% Similarity=0.004 Sum_probs=90.1
Q ss_pred CCCccEEEEeecccC--C-------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASR--P-------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~--~-------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...+|+|||+|+... + .+++.+++|+.++.++++++... ..+.++||++||...+...
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~---------- 156 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGN---------- 156 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCC----------
Confidence 356899999998421 1 22446789999999999987543 1146799999998666421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. +. .+.... ..+|...|.+++.++.+ ..+ +.+++++|+.+-.+......+.. ...+. .+.|+.
T Consensus 157 ~-~~---~~~~~~Y~~sKa~~~~~~~~~a~~~~~~g---i~v~~v~Pg~~~t~~~~~~~~~~-----~~~~~--~~~~~~ 222 (259)
T PRK08213 157 P-PE---VMDTIAYNTSKGAVINFTRALAAEWGPHG---IRVNAIAPGFFPTKMTRGTLERL-----GEDLL--AHTPLG 222 (259)
T ss_pred C-cc---ccCcchHHHHHHHHHHHHHHHHHHhcccC---EEEEEEecCcCCCcchhhhhHHH-----HHHHH--hcCCCC
Confidence 1 10 000001 13456667666666543 246 99999999888665432222111 01111 122322
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.. ...+++++.+.+++... ...|+.+++.+|.
T Consensus 223 ~~------------~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~ 256 (259)
T PRK08213 223 RL------------GDDEDLKGAALLLASDASKHITGQILAVDGGV 256 (259)
T ss_pred CC------------cCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 22 23567888777776533 3468999988764
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=8.5e-06 Score=72.31 Aligned_cols=148 Identities=9% Similarity=-0.001 Sum_probs=90.7
Q ss_pred CCccEEEEeecccC-------------C-----ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCcc
Q 045430 11 TDVTHIFYVTWASR-------------P-----TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-------------~-----~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~ 69 (309)
.++|+|||+|+... . +....+++|+.++.+++.++... ...-.+||++||...||.+
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-- 158 (253)
T PRK08217 81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM-- 158 (253)
T ss_pred CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC--
Confidence 46899999998321 1 22346789999998777654321 0012469999998777632
Q ss_pred ccCCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh
Q 045430 70 SFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK 147 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~ 147 (309)
.. .+. ..+|.+.+.+++..+.+ ..+ +..+.+||+.|.++......+... ..+ .
T Consensus 159 --------~~-----~~Y---~~sK~a~~~l~~~la~~~~~~~---i~v~~v~pg~v~t~~~~~~~~~~~-----~~~-~ 213 (253)
T PRK08217 159 --------GQ-----TNY---SASKAGVAAMTVTWAKELARYG---IRVAAIAPGVIETEMTAAMKPEAL-----ERL-E 213 (253)
T ss_pred --------CC-----chh---HHHHHHHHHHHHHHHHHHHHcC---cEEEEEeeCCCcCccccccCHHHH-----HHH-H
Confidence 10 000 13466666666555432 246 999999999998875433222110 000 0
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCC
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGD 198 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~ 198 (309)
.+.|+ ..+..++|+|+++.+++......|++|++.+|-
T Consensus 214 -~~~~~------------~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 214 -KMIPV------------GRLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred -hcCCc------------CCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 11121 234467899999998886655679999999874
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.8e-05 Score=70.07 Aligned_cols=151 Identities=10% Similarity=0.054 Sum_probs=88.0
Q ss_pred CCCccEEEEeeccc-CC---------ChHHHHHhHHHHHHHHHHHhCcC-----CCCCceEEEEeCCccccCCccccCCC
Q 045430 10 LTDVTHIFYVTWAS-RP---------TEAENCEVNGAMLRNVLRSVIPN-----APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~-----~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
...+|+|||+|+.. .. +.+..+++|+.++.++++++... ..+-++||++||...+...
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~------- 149 (247)
T PRK09730 77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA------- 149 (247)
T ss_pred CCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC-------
Confidence 45789999999842 11 22357899999998887765432 0112569999997554321
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. .+..++ ..+|...+.+++..+.+ ..+ ++++++||+.||||........ ..+..+. .+.|
T Consensus 150 ---~---~~~~~Y---~~sK~~~~~~~~~l~~~~~~~~---i~v~~i~pg~~~~~~~~~~~~~----~~~~~~~--~~~~ 211 (247)
T PRK09730 150 ---P---GEYVDY---AASKGAIDTLTTGLSLEVAAQG---IRVNCVRPGFIYTEMHASGGEP----GRVDRVK--SNIP 211 (247)
T ss_pred ---C---Ccccch---HhHHHHHHHHHHHHHHHHHHhC---eEEEEEEeCCCcCcccccCCCH----HHHHHHH--hcCC
Confidence 1 000011 13455666555544331 247 9999999999999864221100 0011111 1222
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+. -..+++|+++++++++..+ ...|+.|+|.+|
T Consensus 212 ~~------------~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 212 MQ------------RGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred CC------------CCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence 21 1126789999998888643 356888888775
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=7.6e-05 Score=69.22 Aligned_cols=106 Identities=8% Similarity=-0.100 Sum_probs=61.9
Q ss_pred CCCCccEEEEeecccC-------CChHHHHHhHHHHHHHHHH----HhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASR-------PTEAENCEVNGAMLRNVLR----SVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~-------~~~~~~~~vNv~gt~nll~----a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|+|||+|+... +.++..+++|+.|+.++++ ++++. +..|||++||...+... ..
T Consensus 96 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~--~~~~iV~vSS~~~~~~~---~~----- 165 (315)
T PRK06196 96 SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG--AGARVVALSSAGHRRSP---IR----- 165 (315)
T ss_pred cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCeEEEECCHHhccCC---CC-----
Confidence 3457999999998421 1345678999999665555 44443 34799999997544321 00
Q ss_pred CCCCCCCCCCCCcccchHHHHHH-----HHHHHHh--cCCCcceeEEeecCCceecccC
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDI-----LFEEVEK--RKGPLSLTWSVHRPHIIFGFSP 129 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~-----~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~ 129 (309)
.....+..+.. +..-|+..|. .+..+.. ..+ +.++++||+.|.++..
T Consensus 166 ~~~~~~~~~~~--~~~~Y~~SK~a~~~~~~~la~~~~~~g---i~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 166 WDDPHFTRGYD--KWLAYGQSKTANALFAVHLDKLGKDQG---VRAFSVHPGGILTPLQ 219 (315)
T ss_pred ccccCccCCCC--hHHHHHHHHHHHHHHHHHHHHHhcCCC---cEEEEeeCCcccCCcc
Confidence 00011111111 2223555544 3333221 246 9999999999999854
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.6e-05 Score=69.23 Aligned_cols=153 Identities=8% Similarity=0.028 Sum_probs=88.8
Q ss_pred CCCCccEEEEeecccCC------Ch---HHHHHhHHH----HHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP------TE---AENCEVNGA----MLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~~---~~~~~vNv~----gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
...++|+|||+|+.... +. +..+++|+. +++++++++++. +.++||++||...|+..
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~~ss~~~~~~~-------- 145 (251)
T PRK07069 76 AMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS--QPASIVNISSVAAFKAE-------- 145 (251)
T ss_pred HcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc--CCcEEEEecChhhccCC--------
Confidence 34578999999984321 22 335688988 899999999876 46899999998777532
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh----cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
...+ .. ..+|...+.+++..+.+ ..+ +.++.++|+.|.+|...+.......-..+..+. .+.
T Consensus 146 -~~~~-----~Y---~~sK~a~~~~~~~la~e~~~~~~~---i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~ 211 (251)
T PRK07069 146 -PDYT-----AY---NASKAAVASLTKSIALDCARRGLD---VRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLA--RGV 211 (251)
T ss_pred -CCCc-----hh---HHHHHHHHHHHHHHHHHhcccCCc---EEEEEEeecccCCcchhHHhhhccchhHHHHHh--ccC
Confidence 0110 00 12345555444443321 134 889999999998875422111000000000000 011
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
....+.+++|+++++++++..+ ...|+...+.+|
T Consensus 212 ------------~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 212 ------------PLGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred ------------CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 1123457899999988877543 345777777655
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.6e-06 Score=74.99 Aligned_cols=158 Identities=11% Similarity=0.052 Sum_probs=92.2
Q ss_pred CCccEEEEeeccc-CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC-----
Q 045430 11 TDVTHIFYVTWAS-RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED----- 84 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~----- 84 (309)
.++|+|||+|+.. ..+.+..+++|+.++.++++++...-..-.|||++||...|+.+ ...|..|.
T Consensus 47 ~~iD~li~nAG~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~---------~~~~~~~~~~~~~ 117 (241)
T PRK12428 47 GRIDALFNIAGVPGTAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWP---------QRLELHKALAATA 117 (241)
T ss_pred CCCeEEEECCCCCCCCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccc---------cchHHHHhhhccc
Confidence 3689999999954 34677889999999999999986531112699999999998743 12222221
Q ss_pred -----------CCCCCc-c--cchHHHHHHHHHHH-H--hcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh
Q 045430 85 -----------LPRLNV-T--NFYYTQEDILFEEV-E--KRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK 147 (309)
Q Consensus 85 -----------~p~~p~-p--~~~y~~e~~~~~~~-~--~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~ 147 (309)
.|..+. + .+|.+.+.+.+..+ . +..+ +.++.|+|+.|.++-......... ...+.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~g---irvn~v~PG~v~T~~~~~~~~~~~----~~~~~~ 190 (241)
T PRK12428 118 SFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARG---IRVNCVAPGPVFTPILGDFRSMLG----QERVDS 190 (241)
T ss_pred hHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccC---eEEEEeecCCccCcccccchhhhh----hHhhhh
Confidence 111111 1 22344444444444 2 1246 999999999998874322111000 000000
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
.. . ...-+...+|+|+++++.+..+ ...|+...+..|
T Consensus 191 ----~~-~--------~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg 229 (241)
T PRK12428 191 ----DA-K--------RMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG 229 (241)
T ss_pred ----cc-c--------ccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCc
Confidence 00 0 1112456789999988877543 245777777655
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=9.6e-06 Score=71.94 Aligned_cols=150 Identities=11% Similarity=0.032 Sum_probs=91.3
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|+.... +.++.+++|+.++.++++++.... .+-.|||++||...+... ..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~ 152 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA---------PK 152 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC---------CC
Confidence 3578999999984321 224457899999999999975431 123589999997655421 00
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. .. ..+|...+.+++..+.+ ..+ +.++.++|+.|..+........ . ....+ + .+.
T Consensus 153 ~---------~~y~~sK~~~~~~~~~l~~~~~~~~---i~v~~v~pg~v~t~~~~~~~~~-~---~~~~~-~-~~~---- 210 (250)
T PRK12939 153 L---------GAYVASKGAVIGMTRSLARELGGRG---ITVNAIAPGLTATEATAYVPAD-E---RHAYY-L-KGR---- 210 (250)
T ss_pred c---------chHHHHHHHHHHHHHHHHHHHhhhC---EEEEEEEECCCCCccccccCCh-H---HHHHH-H-hcC----
Confidence 0 01 13455556655544331 246 9999999998877643221110 0 00000 0 011
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
....+++++|+++++++++..+ ...|+.+++.+|.
T Consensus 211 --------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 211 --------ALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred --------CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 2234678999999999988654 3468999998874
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.4e-05 Score=69.39 Aligned_cols=153 Identities=13% Similarity=0.067 Sum_probs=86.1
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeC-CccccCCccccCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG-GKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss-~~vYG~~~~~~~~~~~~~~ 79 (309)
..++|+|||+|+.... ++++.+++|+.++.++++++...-..-.++|++|| ...||.+ .
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~----------~- 146 (249)
T PRK06500 78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP----------N- 146 (249)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC----------C-
Confidence 3468999999984211 23457899999999999999742101246676666 4444421 0
Q ss_pred CCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc-chhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM-MNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
..++ ..+|.+.|.+++.++.+ ..+ ++++++||+.+++|..... ......-.+...+. .+.|+.
T Consensus 147 ----~~~Y---~~sK~a~~~~~~~la~e~~~~g---i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~-- 212 (249)
T PRK06500 147 ----SSVY---AASKAALLSLAKTLSGELLPRG---IRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQ--ALVPLG-- 212 (249)
T ss_pred ----ccHH---HHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCcCCCHHHHhhccCccchHHHHHHHH--hcCCCC--
Confidence 0000 13456666666554432 246 9999999999999742110 00000000000110 122221
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
-+.+++|+++++.+.+..+ ...|+...|.+|
T Consensus 213 ----------~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 213 ----------RFGTPEEIAKAVLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred ----------CCcCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence 1246889999988877643 234777777665
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.3e-05 Score=67.36 Aligned_cols=161 Identities=14% Similarity=0.074 Sum_probs=91.4
Q ss_pred cCCCCccEEEEeecccC--------C---ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccC
Q 045430 8 SKLTDVTHIFYVTWASR--------P---TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~--------~---~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
+...++|+|+|+|+... . ++++.+++|+.++.++++++ ++. +..+||++||...+...
T Consensus 73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~ii~isS~~~~~~~----- 145 (260)
T PRK06523 73 ERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR--GSGVIIHVTSIQRRLPL----- 145 (260)
T ss_pred HHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc--CCcEEEEEecccccCCC-----
Confidence 34457899999998421 1 34557899999998776654 333 34689999998655321
Q ss_pred CCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH-----HHHHHH-H
Q 045430 73 KIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG-----TLCVYA-A 144 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~-----~~~i~~-~ 144 (309)
.+... +-..+|.+.+.+++..+.+ ..+ +.+++++|+.|.++.......... ....+. .
T Consensus 146 ---------~~~~~--~Y~~sK~a~~~l~~~~a~~~~~~g---i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 211 (260)
T PRK06523 146 ---------PESTT--AYAAAKAALSTYSKSLSKEVAPKG---VRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQI 211 (260)
T ss_pred ---------CCCcc--hhHHHHHHHHHHHHHHHHHHhhcC---cEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHH
Confidence 00000 0013455556555554432 246 999999999998875321110000 000000 0
Q ss_pred HHhH-hCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 145 ICKH-EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 145 l~~~-~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
+.+. .+.|+ .-+...+|+++++.+++..+ ...|+.+.|.+|...|
T Consensus 212 ~~~~~~~~p~------------~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 212 IMDSLGGIPL------------GRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HHHHhccCcc------------CCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 0000 11111 12346788999988888643 3568999999886554
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.12 E-value=3.2e-05 Score=68.34 Aligned_cols=150 Identities=9% Similarity=-0.044 Sum_probs=85.9
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccc-cCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHY-VGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vY-G~~~~~~~~~~~ 76 (309)
...++|.|||+|+...+ ++++.+++|+.++.++++++.+. ..+.++||++||...+ |.+
T Consensus 77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------- 147 (245)
T PRK12936 77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP--------- 147 (245)
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC---------
Confidence 34568999999984221 33557899999999998886432 0135789999996443 321
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.. ... ..+|.+.+.+++..+.+ ..+ +.++++||+.+..+........ .........+
T Consensus 148 -~~-----~~Y---~~sk~a~~~~~~~la~~~~~~~---i~v~~i~pg~~~t~~~~~~~~~---------~~~~~~~~~~ 206 (245)
T PRK12936 148 -GQ-----ANY---CASKAGMIGFSKSLAQEIATRN---VTVNCVAPGFIESAMTGKLNDK---------QKEAIMGAIP 206 (245)
T ss_pred -CC-----cch---HHHHHHHHHHHHHHHHHhhHhC---eEEEEEEECcCcCchhcccChH---------HHHHHhcCCC
Confidence 10 000 12344433343333221 246 9999999998765432221110 0000000111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~ 198 (309)
...+...+|+++++++++..+. ..|+.|++.+|.
T Consensus 207 ----------~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 207 ----------MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred ----------CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 1124458889999887775432 359999999874
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.2e-05 Score=69.62 Aligned_cols=156 Identities=8% Similarity=-0.082 Sum_probs=89.2
Q ss_pred CCCCccEEEEeecccC-C---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASR-P---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~-~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
....+|+|||+|+... . ++++.+++|+.++.++++++.... .+.++||++||...++..
T Consensus 78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 148 (251)
T PRK07231 78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR--------- 148 (251)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC---------
Confidence 3457899999998421 1 234578999998777776665320 146899999998777531
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
... .+. ..+|...+.+++.++.+ ..+ +.++.+||+.|.++.......... ..+. . .+.
T Consensus 149 ~~~-----~~y---~~sk~~~~~~~~~~a~~~~~~~---i~v~~i~pg~~~t~~~~~~~~~~~--~~~~---~----~~~ 208 (251)
T PRK07231 149 PGL-----GWY---NASKGAVITLTKALAAELGPDK---IRVNAVAPVVVETGLLEAFMGEPT--PENR---A----KFL 208 (251)
T ss_pred CCc-----hHH---HHHHHHHHHHHHHHHHHhhhhC---eEEEEEEECccCCCcchhhhcccC--hHHH---H----HHh
Confidence 010 000 12344445444444332 136 999999999996653221111000 0000 0 000
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~ 199 (309)
.+. ....+.+++|+|+++++++..+. ..|+.+.+.+|..
T Consensus 209 -~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~ 249 (251)
T PRK07231 209 -ATI-----PLGRLGTPEDIANAALFLASDEASWITGVTLVVDGGRC 249 (251)
T ss_pred -cCC-----CCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCcc
Confidence 000 11245689999999999886542 3488888877653
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.8e-05 Score=69.94 Aligned_cols=152 Identities=14% Similarity=0.092 Sum_probs=91.4
Q ss_pred cCCCCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 8 SKLTDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
+...++|+++|+|+... + ++++.+++|+.|+.++++++...-..-.+||++||...|... .
T Consensus 124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~---------~ 194 (294)
T PRK07985 124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS---------P 194 (294)
T ss_pred HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC---------C
Confidence 34567899999998421 1 335578999999999999986531112589999998777531 0
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCC--cchhHHHHHHHHHHHhHhCCce
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYS--MMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~--~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
.. .++ ..+|.+.+.+++..+.+ ..+ +++.+++|++|+++.... .... .+..+ +...
T Consensus 195 ~~-----~~Y---~asKaal~~l~~~la~el~~~g---Irvn~i~PG~v~t~~~~~~~~~~~-----~~~~~----~~~~ 254 (294)
T PRK07985 195 HL-----LDY---AATKAAILNYSRGLAKQVAEKG---IRVNIVAPGPIWTALQISGGQTQD-----KIPQF----GQQT 254 (294)
T ss_pred Cc-----chh---HHHHHHHHHHHHHHHHHHhHhC---cEEEEEECCcCccccccccCCCHH-----HHHHH----hccC
Confidence 10 000 12344444444444332 247 999999999999984311 1110 00011 1111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+. ..+...+|+|+++++.+..+ ...|+++.|.+|.
T Consensus 255 ~~----------~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 255 PM----------KRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred CC----------CCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence 11 12446888999988887643 3458999988774
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.9e-05 Score=67.76 Aligned_cols=148 Identities=13% Similarity=0.054 Sum_probs=87.5
Q ss_pred CCCccEEEEeecccC------C---ChHHHHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASR------P---TEAENCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~------~---~~~~~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...+|+|||+|+... . ++++.+++|+.++.+++.+ +++. +..+||++||...++..
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~iss~~~~~~~--------- 146 (245)
T PRK12824 78 EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ--GYGRIINISSVNGLKGQ--------- 146 (245)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh--CCeEEEEECChhhccCC---------
Confidence 446899999998421 1 3345679999999888554 4444 46799999998666421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
... +. ..+|.+.+.+++.++.+ ..+ +..++++|+.+.++........ ....+.. ..++
T Consensus 147 ~~~---------~~Y~~sK~a~~~~~~~l~~~~~~~~---i~v~~v~pg~~~t~~~~~~~~~-----~~~~~~~--~~~~ 207 (245)
T PRK12824 147 FGQ---------TNYSAAKAGMIGFTKALASEGARYG---ITVNCIAPGYIATPMVEQMGPE-----VLQSIVN--QIPM 207 (245)
T ss_pred CCC---------hHHHHHHHHHHHHHHHHHHHHHHhC---eEEEEEEEcccCCcchhhcCHH-----HHHHHHh--cCCC
Confidence 010 11 12344444444443321 246 9999999999988743222111 1111111 1111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..+..++++++++.+++..+ ...|+.+++.+|..
T Consensus 208 ------------~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK12824 208 ------------KRLGTPEEIAAAVAFLVSEAAGFITGETISINGGLY 243 (245)
T ss_pred ------------CCCCCHHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence 22345788999987777532 34699999999864
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00017 Score=64.69 Aligned_cols=169 Identities=9% Similarity=0.035 Sum_probs=114.4
Q ss_pred HhccCCCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 5 AKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 5 ~~~~~~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
..+.+++|+|.++++........ .+....+....++.+++. . ++++++++|...+...
T Consensus 56 ~l~~a~~G~~~~~~i~~~~~~~~-~~~~~~~~~~~~~a~~a~-~--~~~~~~~~s~~~~~~~------------------ 113 (275)
T COG0702 56 SLVAGAKGVDGVLLISGLLDGSD-AFRAVQVTAVVRAAEAAG-A--GVKHGVSLSVLGADAA------------------ 113 (275)
T ss_pred HHHHHhccccEEEEEeccccccc-chhHHHHHHHHHHHHHhc-C--CceEEEEeccCCCCCC------------------
Confidence 34456788999999987433333 677777777778888876 2 5788998887632210
Q ss_pred CCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcccccc
Q 045430 85 LPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEG 164 (309)
Q Consensus 85 ~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~ 164 (309)
+ + +.|..++...|......+ ++++++||...|....... .. .....+.++...+.+
T Consensus 114 ~---~---~~~~~~~~~~e~~l~~sg---~~~t~lr~~~~~~~~~~~~---~~-------~~~~~~~~~~~~~~~----- 169 (275)
T COG0702 114 S---P---SALARAKAAVEAALRSSG---IPYTTLRRAAFYLGAGAAF---IE-------AAEAAGLPVIPRGIG----- 169 (275)
T ss_pred C---c---cHHHHHHHHHHHHHHhcC---CCeEEEecCeeeeccchhH---HH-------HHHhhCCceecCCCC-----
Confidence 0 1 124444444443332357 9999999877776443211 00 112234454434443
Q ss_pred ceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCC
Q 045430 165 YSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYG 219 (309)
Q Consensus 165 ~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~ 219 (309)
....++++|++++...++..+...+++|.++..+..+..++...+....|.+...
T Consensus 170 ~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 170 RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred ceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence 3688899999999888777776779999999999999999999999999987654
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00012 Score=67.39 Aligned_cols=55 Identities=11% Similarity=0.025 Sum_probs=40.7
Q ss_pred CCCCccEEEEeecccCC-------ChHHHHHhHHHH----HHHHHHHhCcCCCCCceEEEEeCCcccc
Q 045430 9 KLTDVTHIFYVTWASRP-------TEAENCEVNGAM----LRNVLRSVIPNAPNLRHVCLQTGGKHYV 65 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~-------~~~~~~~vNv~g----t~nll~a~~~~~~~v~r~v~~Ss~~vYG 65 (309)
....+|+|||+|+...+ +.+..+++|+.| |+.+++.+++. +.+|||++||...+.
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~--~~~~iV~vSS~~~~~ 157 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV--PGSRVVTVSSGGHRI 157 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEECCHHHhc
Confidence 34568999999984211 335568999999 77788888765 357999999987553
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.2e-05 Score=67.40 Aligned_cols=160 Identities=10% Similarity=-0.066 Sum_probs=91.6
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
...+|+|||+|+.... ++.+.+++|+.++.++++++...- .+-.+||++||......
T Consensus 74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~------------ 141 (252)
T PRK08220 74 TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP------------ 141 (252)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC------------
Confidence 3468999999984211 334468999999999999975310 13468999999744321
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
......+ ..+|...+.+++..+.+ ..+ +.++++||+.|+++.....+.... ............+
T Consensus 142 --~~~~~~Y---~~sK~a~~~~~~~la~e~~~~~---i~v~~i~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~--- 207 (252)
T PRK08220 142 --RIGMAAY---GASKAALTSLAKCVGLELAPYG---VRCNVVSPGSTDTDMQRTLWVDED---GEQQVIAGFPEQF--- 207 (252)
T ss_pred --CCCCchh---HHHHHHHHHHHHHHHHHhhHhC---eEEEEEecCcCcchhhhhhccchh---hhhhhhhhHHHHH---
Confidence 1111110 13456666665554432 256 999999999999985432211000 0000000000000
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
..+. ....+..++|+|+++++++.. ....|++.-+.+|.
T Consensus 208 ~~~~---~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 208 KLGI---PLGKIARPQEIANAVLFLASDLASHITLQDIVVDGGA 248 (252)
T ss_pred hhcC---CCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence 0001 224678899999999988864 24557877777664
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0001 Score=64.69 Aligned_cols=150 Identities=10% Similarity=0.012 Sum_probs=86.6
Q ss_pred CccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 12 ~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
++|+|||+|+.... +..+.+++|+.++.++++++... ..+.+|||++||..+||.+ ..
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~- 136 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL----------DR- 136 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC----------Cc-
Confidence 68999999984321 22346789999988886665321 0146799999999877642 10
Q ss_pred CCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 81 FTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 81 ~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
.++ ..+|-+.+.+++..+.+ ..+ +.++++||+.|..+......+... .....+. ...+ .
T Consensus 137 ----~~Y---~~sK~a~~~~~~~~a~e~~~~g---i~v~~i~pg~~~t~~~~~~~~~~~--~~~~~~~--~~~~--~--- 197 (234)
T PRK07577 137 ----TSY---SAAKSALVGCTRTWALELAEYG---ITVNAVAPGPIETELFRQTRPVGS--EEEKRVL--ASIP--M--- 197 (234)
T ss_pred ----hHH---HHHHHHHHHHHHHHHHHHHhhC---cEEEEEecCcccCcccccccccch--hHHHHHh--hcCC--C---
Confidence 000 12344445444443321 247 999999999998764322111000 0000000 0111 0
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
......+|+|++++.++..+ ...|+.+++.+|.
T Consensus 198 -------~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 198 -------RRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred -------CCCcCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence 12346788999998888654 3458999997764
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.9e-05 Score=69.24 Aligned_cols=150 Identities=9% Similarity=0.081 Sum_probs=89.0
Q ss_pred CccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 12 ~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~ 82 (309)
++|+|+|+|+.... + ++..+++|+.|+.++++++...-..-.+||++||...+... |
T Consensus 88 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~-- 153 (252)
T PRK12747 88 KFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL------------P-- 153 (252)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC------------C--
Confidence 69999999984311 2 24467899999999998876531112589999998655321 0
Q ss_pred CCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcc
Q 045430 83 EDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKD 160 (309)
Q Consensus 83 E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~ 160 (309)
+..++ -.+|.+.+.+++..+.+ ..+ +.++.+.|+.|.++-..+....- ....+.+ ...+
T Consensus 154 ~~~~Y---~~sKaa~~~~~~~la~e~~~~g---irvn~v~Pg~v~t~~~~~~~~~~----~~~~~~~-~~~~-------- 214 (252)
T PRK12747 154 DFIAY---SMTKGAINTMTFTLAKQLGARG---ITVNAILPGFIKTDMNAELLSDP----MMKQYAT-TISA-------- 214 (252)
T ss_pred CchhH---HHHHHHHHHHHHHHHHHHhHcC---CEEEEEecCCccCchhhhcccCH----HHHHHHH-hcCc--------
Confidence 00000 13455655555544332 246 99999999999887432221100 0001100 0001
Q ss_pred ccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+..++|+|+++.+++... ...|+.+.+.+|.
T Consensus 215 ----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~ 250 (252)
T PRK12747 215 ----FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS 250 (252)
T ss_pred ----ccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence 123567899999998877542 2458888887663
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=7.6e-05 Score=66.95 Aligned_cols=136 Identities=11% Similarity=-0.026 Sum_probs=80.8
Q ss_pred CCCccEEEEeecccCC-------Ch---HHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP-------TE---AENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~-------~~---~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
+.++|+|||+|+.... +. .+.+++|+.++.++++++.... .+.+++|++||...|+.. .
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~ 145 (263)
T PRK06181 76 FGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV----------P 145 (263)
T ss_pred cCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC----------C
Confidence 4578999999984221 22 3358999999999999985320 134789999998777531 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
+ .+. ..+|...+.+++.+..+ ..+ +.++++||+.|..+...... ...+.+...
T Consensus 146 -~-------~~~Y~~sK~~~~~~~~~l~~~~~~~~---i~~~~i~pg~v~t~~~~~~~-------------~~~~~~~~~ 201 (263)
T PRK06181 146 -T-------RSGYAASKHALHGFFDSLRIELADDG---VAVTVVCPGFVATDIRKRAL-------------DGDGKPLGK 201 (263)
T ss_pred -C-------ccHHHHHHHHHHHHHHHHHHHhhhcC---ceEEEEecCccccCcchhhc-------------ccccccccc
Confidence 0 000 12233334444333221 246 99999999988765332111 011222111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVD 184 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~ 184 (309)
.+. +..++++++|+|++++.++..
T Consensus 202 ~~~-----~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 202 SPM-----QESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred ccc-----cccCCCCHHHHHHHHHHHhhC
Confidence 111 224789999999999988864
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=6.9e-05 Score=67.08 Aligned_cols=146 Identities=13% Similarity=0.033 Sum_probs=86.3
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC-C-CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN-A-PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~-~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
...+|+|||+|+.... +.++.+++|+.++.++++++... . .+-.+||++||...|+..
T Consensus 93 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------- 161 (256)
T PRK12748 93 LGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM----------- 161 (256)
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC-----------
Confidence 3568999999984311 22445899999999999998532 1 124689999998766521
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.....+ -.+|.+.+.+++..+.+ ..+ +.++.++|+.+..+..... +.+... + .++
T Consensus 162 ---~~~~~Y---~~sK~a~~~~~~~la~e~~~~~---i~v~~i~Pg~~~t~~~~~~------------~~~~~~-~-~~~ 218 (256)
T PRK12748 162 ---PDELAY---AATKGAIEAFTKSLAPELAEKG---ITVNAVNPGPTDTGWITEE------------LKHHLV-P-KFP 218 (256)
T ss_pred ---CCchHH---HHHHHHHHHHHHHHHHHHHHhC---eEEEEEEeCcccCCCCChh------------HHHhhh-c-cCC
Confidence 001100 13456666665544432 246 9999999987755422110 000000 1 111
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
.. .+...+++++++.+++... ...|+.+++.+|
T Consensus 219 ~~--------~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 219 QG--------RVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred CC--------CCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 11 1234688999988777543 245899999766
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=8.6e-05 Score=66.92 Aligned_cols=97 Identities=8% Similarity=-0.014 Sum_probs=63.7
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...+|+|||+|+.... +.++.+++|+.|+.++++++ ++. +.+|||++||...+...
T Consensus 71 ~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~~~iv~isS~~~~~~~--------- 139 (270)
T PRK06179 71 AGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ--GSGRIINISSVLGFLPA--------- 139 (270)
T ss_pred CCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEECCccccCCC---------
Confidence 4568999999985321 23557899999999999885 443 57899999997555321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccC
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSP 129 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~ 129 (309)
|. ... ..+|.+.+.++.....+ ..+ ++++++||+.|.++..
T Consensus 140 ---~~------~~~Y~~sK~a~~~~~~~l~~el~~~g---i~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 140 ---PY------MALYAASKHAVEGYSESLDHEVRQFG---IRVSLVEPAYTKTNFD 183 (270)
T ss_pred ---CC------ccHHHHHHHHHHHHHHHHHHHHhhhC---cEEEEEeCCCcccccc
Confidence 10 001 12344445444443321 247 9999999999988744
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=9.8e-05 Score=65.47 Aligned_cols=151 Identities=14% Similarity=0.108 Sum_probs=85.7
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
+...++|+|||+|+.... ++++.+++|+.++.++++++... ..+.+|||++||.....
T Consensus 77 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------- 145 (246)
T PRK12938 77 AEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----------- 145 (246)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC-----------
Confidence 344578999999985321 33556899999977765554321 11568999999863221
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
..+ .... ..+|...+.+.+..+.+ ..+ +.++.++|+.+.+|......+. .+..+. ...++
T Consensus 146 -~~~------~~~~y~~sK~a~~~~~~~l~~~~~~~g---i~v~~i~pg~~~t~~~~~~~~~-----~~~~~~--~~~~~ 208 (246)
T PRK12938 146 -GQF------GQTNYSTAKAGIHGFTMSLAQEVATKG---VTVNTVSPGYIGTDMVKAIRPD-----VLEKIV--ATIPV 208 (246)
T ss_pred -CCC------CChhHHHHHHHHHHHHHHHHHHhhhhC---eEEEEEEecccCCchhhhcChH-----HHHHHH--hcCCc
Confidence 100 0000 12344444444333321 246 9999999999988753322111 111111 11111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..+...+++++++.+++..+ ...|+.+++..|.
T Consensus 209 ------------~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g~ 243 (246)
T PRK12938 209 ------------RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL 243 (246)
T ss_pred ------------cCCcCHHHHHHHHHHHcCcccCCccCcEEEECCcc
Confidence 23446788999988777543 3568999987653
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=8.1e-05 Score=66.56 Aligned_cols=160 Identities=11% Similarity=0.041 Sum_probs=92.4
Q ss_pred CCCCccEEEEeecccCC--------ChHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP--------TEAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
...++|+|||+|+.... ++++.+++|+.++.++.+++... ..+..+||++||...+... .
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~- 148 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ----------G- 148 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC----------C-
Confidence 34578999999984211 23456899999999998887532 1123689999997554311 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH-HHHHHHHHHhHhCCceee
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG-TLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~-~~~i~~~l~~~~g~~~~~ 155 (309)
+ .+. ..+|.+.+.+++..+.+ ..+ +.++.+||+.|+++.......... .-..+..+ . ..+++
T Consensus 149 ~-------~~~Y~~sK~a~~~~~~~l~~e~~~~~---i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---~-~~~~~ 214 (258)
T PRK08628 149 G-------TSGYAAAKGAQLALTREWAVALAKDG---VRVNAVIPAEVMTPLYENWIATFDDPEAKLAAI---T-AKIPL 214 (258)
T ss_pred C-------CchhHHHHHHHHHHHHHHHHHHhhcC---eEEEEEecCccCCHHHHHHhhhccCHHHHHHHH---H-hcCCc
Confidence 0 011 13455566666655432 246 999999999999985321100000 00000000 0 01111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHH
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWK 203 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~ 203 (309)
+ ..+...+|+|+++++++..+ ...|+.+.+.+|. ..++
T Consensus 215 -~--------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~-~~~~ 254 (258)
T PRK08628 215 -G--------HRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY-VHLD 254 (258)
T ss_pred -c--------ccCCCHHHHHHHHHHHhChhhccccCceEEecCCc-cccc
Confidence 1 13567899999999988653 3568888886553 4433
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.1e-05 Score=67.90 Aligned_cols=152 Identities=9% Similarity=0.003 Sum_probs=90.9
Q ss_pred CCCCccEEEEeecccCC-----------ChHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP-----------TEAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
....+|+|||+|+...+ ++++.+++|+.++.++++++... ...-.+||++||...+...
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~--------- 151 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE--------- 151 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC---------
Confidence 34568999999984321 23457899999999999999632 0013689999987655321
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
... .++ ..+|.+.+.+++..+.+. .+ +.++.++|+.|.++....... ..+ ..... . ..+
T Consensus 152 ~~~-----~~Y---~~sKaa~~~~~~~la~~~~~~---i~v~~i~Pg~i~t~~~~~~~~--~~~---~~~~~--~-~~~- 211 (255)
T PRK05717 152 PDT-----EAY---AASKGGLLALTHALAISLGPE---IRVNAVSPGWIDARDPSQRRA--EPL---SEADH--A-QHP- 211 (255)
T ss_pred CCC-----cch---HHHHHHHHHHHHHHHHHhcCC---CEEEEEecccCcCCccccccc--hHH---HHHHh--h-cCC-
Confidence 000 000 134566666666665532 34 899999999999975422110 000 00000 0 111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
. ..+..++|+++++.+++... ...|+.+.+.+|.
T Consensus 212 -~--------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 212 -A--------GRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred -C--------CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCc
Confidence 1 13457889999988777542 2458888886654
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=97.98 E-value=7.1e-06 Score=57.66 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=24.2
Q ss_pred ccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 272 LLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 272 ~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
...+|++||++ |||+|++||+++++.+++|++++
T Consensus 24 ~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n 58 (62)
T PF13950_consen 24 HLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN 58 (62)
T ss_dssp EE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred hhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence 35799999987 79999999999999999999874
|
... |
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00012 Score=65.64 Aligned_cols=157 Identities=10% Similarity=-0.012 Sum_probs=90.4
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
....+|+|||+|+.... ++++.+++|+.++.++++++...-..-.++++++|+.+....
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~------------ 153 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT------------ 153 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC------------
Confidence 34578999999985211 234467999999999999986531112467766444322210
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
|. ... -.+|.+.|.+++.++.+ ..+ +++++++|+.|.++...+....-. . ..........++
T Consensus 154 ~~------~~~Y~~sK~a~~~~~~~la~e~~~~~---i~v~~v~pg~v~t~~~~~~~~~~~----~-~~~~~~~~~~~~- 218 (257)
T PRK12744 154 PF------YSAYAGSKAPVEHFTRAASKEFGARG---ISVTAVGPGPMDTPFFYPQEGAEA----V-AYHKTAAALSPF- 218 (257)
T ss_pred CC------cccchhhHHHHHHHHHHHHHHhCcCc---eEEEEEecCccccchhccccccch----h-hccccccccccc-
Confidence 00 011 24577777777666553 136 999999999997763211100000 0 000000000011
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~g~~ 199 (309)
...-+.+++|+++++++++... ...|+++++.+|..
T Consensus 219 -------~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 219 -------SKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGYT 255 (257)
T ss_pred -------ccCCCCCHHHHHHHHHHhhcccceeecceEeecCCcc
Confidence 1124678999999999888742 23589999998754
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00012 Score=64.80 Aligned_cols=149 Identities=10% Similarity=0.007 Sum_probs=87.4
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
...++|+|||+|+.... ++++.+++|+.++.++++++.+.-..-.+||++||...+...
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------ 147 (245)
T PRK12937 80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL------------ 147 (245)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC------------
Confidence 34578999999984221 234457899999999998886531122589999886544311
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc-chhHHHHHHHHHHHhHhCCceee
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM-MNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
| .... ..+|.+.+.+++..+.+ ..+ +.+++++|+.|-.+...+. .... ...+.+ ..|+
T Consensus 148 ~------~~~~Y~~sK~a~~~~~~~~a~~~~~~~---i~v~~i~pg~~~t~~~~~~~~~~~-----~~~~~~--~~~~-- 209 (245)
T PRK12937 148 P------GYGPYAASKAAVEGLVHVLANELRGRG---ITVNAVAPGPVATELFFNGKSAEQ-----IDQLAG--LAPL-- 209 (245)
T ss_pred C------CCchhHHHHHHHHHHHHHHHHHhhhcC---eEEEEEEeCCccCchhcccCCHHH-----HHHHHh--cCCC--
Confidence 0 0001 13466666666555432 246 9999999988766531111 1100 001111 1111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
.-+.+++|+++++++++..+ ...|+.+++.+|
T Consensus 210 ----------~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 210 ----------ERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred ----------CCCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence 12335788999988877653 245899999765
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=7.1e-05 Score=65.81 Aligned_cols=173 Identities=13% Similarity=0.070 Sum_probs=107.1
Q ss_pred CccEEEEeec-ccCC---ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTW-ASRP---TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 12 ~vd~V~H~A~-~~~~---~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
.+|..||..+ ++.. +-.--.+||++|.-|+++.+.++ ++ ++..-|++.++|.. . +..|.-.-.--
T Consensus 110 RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~--kL-~iFVPSTIGAFGPt--S------PRNPTPdltIQ 178 (366)
T KOG2774|consen 110 RIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH--KL-KVFVPSTIGAFGPT--S------PRNPTPDLTIQ 178 (366)
T ss_pred ccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc--Ce-eEeecccccccCCC--C------CCCCCCCeeee
Confidence 5899999966 3322 33446799999999999999987 56 46667889888853 1 11121111111
Q ss_pred CCcccchHHHHH----HHHHHHHhcCCCcceeEEeecCCceecccC---C-CcchhHHHHHHHH-HHHhHhCCc-eeecC
Q 045430 88 LNVTNFYYTQED----ILFEEVEKRKGPLSLTWSVHRPHIIFGFSP---Y-SMMNVVGTLCVYA-AICKHEGVP-LLFPG 157 (309)
Q Consensus 88 ~p~p~~~y~~e~----~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~---~-~~~~~~~~~~i~~-~l~~~~g~~-~~~~G 157 (309)
. |.+-|+.+| ++-|+...++| +++--+|++.|+...+ + .-|. +++|- ++. .|.- +..--
T Consensus 179 R--PRTIYGVSKVHAEL~GEy~~hrFg---~dfr~~rfPg~is~~~pgggttdya----~A~f~~Al~--~gk~tCylrp 247 (366)
T KOG2774|consen 179 R--PRTIYGVSKVHAELLGEYFNHRFG---VDFRSMRFPGIISATKPGGGTTDYA----IAIFYDALQ--KGKHTCYLRP 247 (366)
T ss_pred c--CceeechhHHHHHHHHHHHHhhcC---ccceecccCcccccCCCCCCcchhH----HHHHHHHHH--cCCcccccCC
Confidence 1 334455443 34454443588 9999999998887622 1 2233 33333 332 2322 22211
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHHHHHHHHHH
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKHLWKVLAEQ 212 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~el~~~i~~~ 212 (309)
+ ...-+.|..|+-++.+..+..+ .-.-++||++ +-.+|-+|+...|.+.
T Consensus 248 d-----trlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt-~~sftpee~~~~~~~~ 298 (366)
T KOG2774|consen 248 D-----TRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVT-GFSFTPEEIADAIRRV 298 (366)
T ss_pred C-----ccCceeehHHHHHHHHHHHhCCHHHhhhheeeec-eeccCHHHHHHHHHhh
Confidence 2 3357889999888887766554 3456899999 4678888988888654
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00013 Score=64.66 Aligned_cols=151 Identities=11% Similarity=0.030 Sum_probs=90.9
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCC-CceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APN-LRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~-v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...++|+|+|+|+.... ++++.+++|+.++.++++++... ..+ -.++|++||...|+..
T Consensus 77 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 147 (248)
T TIGR01832 77 EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG--------- 147 (248)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC---------
Confidence 44578999999984321 33456799999999999987532 112 4689999998877531
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
... +. ..+|.+.+.+++..+.+ ..+ +.+++++|+.|..+.......... ....+ .. .+
T Consensus 148 ~~~---------~~Y~~sKaa~~~~~~~la~e~~~~g---i~v~~v~pg~v~t~~~~~~~~~~~---~~~~~---~~-~~ 208 (248)
T TIGR01832 148 IRV---------PSYTASKHGVAGLTKLLANEWAAKG---INVNAIAPGYMATNNTQALRADED---RNAAI---LE-RI 208 (248)
T ss_pred CCC---------chhHHHHHHHHHHHHHHHHHhCccC---cEEEEEEECcCcCcchhccccChH---HHHHH---Hh-cC
Confidence 011 11 13456666665555543 146 999999999998764322111000 00000 00 11
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+ ...+...+|+|+++++++..+ ...|+++.+.+|
T Consensus 209 --~--------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 209 --P--------AGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred --C--------CCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence 1 124567899999988888643 235877777655
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.6e-05 Score=67.97 Aligned_cols=151 Identities=9% Similarity=-0.052 Sum_probs=90.2
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccc-cCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHY-VGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vY-G~~~~~~~~~~~~ 77 (309)
..++|+|+|+|+.... +.++.+++|+.|+.++++++... ..+.+|||++||.... |.+
T Consensus 87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 156 (255)
T PRK06841 87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE---------- 156 (255)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC----------
Confidence 3568999999984321 22346899999999999997642 0135799999997433 211
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|-.+.....+.... .. .+ . .+.|
T Consensus 157 ~-----~~~Y---~~sK~a~~~~~~~la~e~~~~g---i~v~~v~pg~v~t~~~~~~~~~~~---~~-~~-~-~~~~--- 216 (255)
T PRK06841 157 R-----HVAY---CASKAGVVGMTKVLALEWGPYG---ITVNAISPTVVLTELGKKAWAGEK---GE-RA-K-KLIP--- 216 (255)
T ss_pred C-----CchH---HHHHHHHHHHHHHHHHHHHhhC---eEEEEEEeCcCcCcccccccchhH---HH-HH-H-hcCC---
Confidence 1 0100 13455555444444332 246 999999999987764322111000 00 00 0 1111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
...+.+++|+++++++++..+ ...|+.+.+.+|..
T Consensus 217 ---------~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~~ 253 (255)
T PRK06841 217 ---------AGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGYT 253 (255)
T ss_pred ---------CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence 124668999999999888654 34589999887753
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00031 Score=61.81 Aligned_cols=158 Identities=10% Similarity=0.028 Sum_probs=92.4
Q ss_pred HHhccCCCCccEEEEeeccc---CC-------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCcccc
Q 045430 4 QAKLSKLTDVTHIFYVTWAS---RP-------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~---~~-------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
++.++.+..+|+|+|+|+.. .+ ++++.+++|+.++.++++++...- .+-.+||++||...+...
T Consensus 59 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 134 (235)
T PRK06550 59 EPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG---- 134 (235)
T ss_pred HHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC----
Confidence 34445566789999999842 11 234468999999999999875320 023589999997554311
Q ss_pred CCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 72 GKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
| ....+ ..+|.+.+.+.+..+.+ ..+ +.+++++|+.|.++.....+.... +...+. .
T Consensus 135 --------~--~~~~Y---~~sK~a~~~~~~~la~~~~~~g---i~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~--~ 193 (235)
T PRK06550 135 --------G--GGAAY---TASKHALAGFTKQLALDYAKDG---IQVFGIAPGAVKTPMTAADFEPGG---LADWVA--R 193 (235)
T ss_pred --------C--CCccc---HHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCCccCcccccccCchH---HHHHHh--c
Confidence 0 00000 13455555554444432 246 999999999998875322111000 001111 1
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..| ...+...+|+|+++++++..+ ...|+++.+.+|.
T Consensus 194 ~~~------------~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~ 232 (235)
T PRK06550 194 ETP------------IKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGW 232 (235)
T ss_pred cCC------------cCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCce
Confidence 111 123456789999999988543 3468888887663
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00022 Score=63.76 Aligned_cols=155 Identities=9% Similarity=-0.026 Sum_probs=86.7
Q ss_pred CCCCccEEEEeecccC--C-------ChHHHHHhHHHHH----HHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASR--P-------TEAENCEVNGAML----RNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~--~-------~~~~~~~vNv~gt----~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
...++|+|||+|+... + +++..+++|+.++ +.++..+++. +-.+||++||...|+.+
T Consensus 76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~g~iv~isS~~~~~~~-------- 145 (255)
T PRK06463 76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS--KNGAIVNIASNAGIGTA-------- 145 (255)
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc--CCcEEEEEcCHHhCCCC--------
Confidence 3457899999998421 1 2345679999995 4455555543 34699999998777531
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. +.. +. ..+|.+.+.+++..+.+ ..+ +.++.++|+.|--+-..+....-........+ . ...+
T Consensus 146 --~----~~~---~~Y~asKaa~~~~~~~la~e~~~~~---i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~-~~~~ 211 (255)
T PRK06463 146 --A----EGT---TFYAITKAGIIILTRRLAFELGKYG---IRVNAVAPGWVETDMTLSGKSQEEAEKLRELF-R-NKTV 211 (255)
T ss_pred --C----CCc---cHhHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCCCCCchhhcccCccchHHHHHHH-H-hCCC
Confidence 0 000 00 13455555555554432 246 99999999987443210000000000000000 0 0111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
...+...+++++++++++..+ ...|+.+.+..|..
T Consensus 212 ------------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~ 248 (255)
T PRK06463 212 ------------LKTTGKPEDIANIVLFLASDDARYITGQVIVADGGRI 248 (255)
T ss_pred ------------cCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence 123456889999999887643 24589999987764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00017 Score=64.63 Aligned_cols=150 Identities=13% Similarity=0.048 Sum_probs=89.2
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC---CCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA---PNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~---~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
....+|+|||+|+.... ++++.+++|+.++.++++++.... ..-.|||++||.....
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----------- 145 (256)
T PRK12743 77 RLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT----------- 145 (256)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC-----------
Confidence 34568999999984211 234568999999999999876531 0125899999963221
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
|... .+. ..+|.+.+.+++..+.+ ..+ +.++.|+|+.|+++..+....... .. ...+.+
T Consensus 146 ---~~~~----~~~Y~~sK~a~~~l~~~la~~~~~~~---i~v~~v~Pg~~~t~~~~~~~~~~~-----~~--~~~~~~- 207 (256)
T PRK12743 146 ---PLPG----ASAYTAAKHALGGLTKAMALELVEHG---ILVNAVAPGAIATPMNGMDDSDVK-----PD--SRPGIP- 207 (256)
T ss_pred ---CCCC----cchhHHHHHHHHHHHHHHHHHhhhhC---eEEEEEEeCCccCccccccChHHH-----HH--HHhcCC-
Confidence 1110 011 13456666665554432 246 999999999999875322111100 00 001111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
. + .+...+|++.++.+++..+ ...|+++++..|.
T Consensus 208 -~-~---------~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 208 -L-G---------RPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred -C-C---------CCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 1 1 1346788999988887643 2458899987764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00014 Score=64.31 Aligned_cols=131 Identities=11% Similarity=0.032 Sum_probs=77.7
Q ss_pred CCCCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|.|||+|+.... + .++.+++|+.++.++++++... ..+.+++|++||...+... .
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------~ 151 (239)
T PRK07666 81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA---------A 151 (239)
T ss_pred HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC---------C
Confidence 34579999999984211 2 2456899999999999887632 1146789999997655421 0
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. .. + -..+|...+.++...+.+ ..+ ++++++||+.|..+..... + +..
T Consensus 152 ~--~~---~---Y~~sK~a~~~~~~~~a~e~~~~g---i~v~~v~pg~v~t~~~~~~-----------------~--~~~ 201 (239)
T PRK07666 152 V--TS---A---YSASKFGVLGLTESLMQEVRKHN---IRVTALTPSTVATDMAVDL-----------------G--LTD 201 (239)
T ss_pred C--Cc---c---hHHHHHHHHHHHHHHHHHhhccC---cEEEEEecCcccCcchhhc-----------------c--ccc
Confidence 0 00 0 012333334444333321 247 9999999999877532100 0 010
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
+.. ..++..+|+|++++.++..+
T Consensus 202 -~~~------~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 202 -GNP------DKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred -cCC------CCCCCHHHHHHHHHHHHhCC
Confidence 111 23467899999988877654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00023 Score=64.56 Aligned_cols=162 Identities=10% Similarity=-0.008 Sum_probs=91.2
Q ss_pred CCCccEEEEeecccCC-----------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCcc-ccCCccccCCCC
Q 045430 10 LTDVTHIFYVTWASRP-----------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKH-YVGPFESFGKIR 75 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~v-YG~~~~~~~~~~ 75 (309)
..++|+|||+|+.... ++++.+++|+.|+.++++++...- .+-.++|++||... +|.+
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------- 163 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-------- 163 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC--------
Confidence 3468999999984211 235578999999999999875320 02247888887543 3321
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcch-hHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMN-VVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~-~~~~~~i~~~l~~~~g~~ 152 (309)
.. .++ ..+|.+.|.+++..+.+ ..+ +.+..++|+.|..+......+ ....-..+..+.......
T Consensus 164 --~~-----~~Y---~~sK~a~~~~~~~la~e~~~~g---i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (280)
T PLN02253 164 --GP-----HAY---TGSKHAVLGLTRSVAAELGKHG---IRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKN 230 (280)
T ss_pred --CC-----ccc---HHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcC
Confidence 00 000 13566666666655542 246 999999999998764211110 000000000000000000
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
.+.. ....+++|+|+++++++..+ ...|+.+++.+|...+
T Consensus 231 ~~l~---------~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~ 272 (280)
T PLN02253 231 ANLK---------GVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCT 272 (280)
T ss_pred CCCc---------CCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhc
Confidence 0000 12357999999999887643 2458999998775544
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.86 E-value=5.6e-05 Score=68.38 Aligned_cols=158 Identities=15% Similarity=-0.046 Sum_probs=82.8
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHH----HHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAM----LRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~g----t~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|+.... +++..+++|+.+ ++++++.+++. +.+|+|++||...+..
T Consensus 72 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~g~iv~isS~~~~~~---------- 139 (273)
T PRK06182 72 EGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ--RSGRIINISSMGGKIY---------- 139 (273)
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc--CCCEEEEEcchhhcCC----------
Confidence 4578999999984321 335567999988 55666666655 4679999999643211
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHH--hcCCCcceeEEeecCCceecccCCCcchhHH-H--HHHHHHHHhHhC
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVE--KRKGPLSLTWSVHRPHIIFGFSPYSMMNVVG-T--LCVYAAICKHEG 150 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~--~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~-~--~~i~~~l~~~~g 150 (309)
.|. ... ..+|.+.+.+.+.... ...+ ++++++||+.|.++.......... . ..-|.......
T Consensus 140 --~~~------~~~Y~~sKaa~~~~~~~l~~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~- 207 (273)
T PRK06182 140 --TPL------GAWYHATKFALEGFSDALRLEVAPFG---IDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAV- 207 (273)
T ss_pred --CCC------ccHhHHHHHHHHHHHHHHHHHhcccC---CEEEEEecCCcccccchhhhhhhcccccccchHHHHHHH-
Confidence 110 000 1234444444332221 1257 999999999998864311100000 0 00000000000
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNG 197 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g 197 (309)
........ ....+.+.+++|++++.++.... ....|+++-+
T Consensus 208 --~~~~~~~~---~~~~~~~~~~vA~~i~~~~~~~~-~~~~~~~g~~ 248 (273)
T PRK06182 208 --AASMRSTY---GSGRLSDPSVIADAISKAVTARR-PKTRYAVGFG 248 (273)
T ss_pred --HHHHHHhh---ccccCCCHHHHHHHHHHHHhCCC-CCceeecCcc
Confidence 00000000 12456789999999988886432 2357777643
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00017 Score=63.65 Aligned_cols=149 Identities=11% Similarity=0.004 Sum_probs=87.2
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|+.... +.++.+++|+.++.++++++... ..+.++||++||...+... ..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~---------~~ 151 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA---------SC 151 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC---------CC
Confidence 3468999999984211 22456899999988888877532 1135789999997555321 01
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. +. ..+|...+.++...+.+ ..+ +.++++||+.|-.+..+...+... ..+ ....
T Consensus 152 ~---------~~y~~sK~a~~~~~~~~~~~~~~~g---i~~~~v~pg~v~t~~~~~~~~~~~-----~~~----~~~~-- 208 (247)
T PRK05565 152 E---------VLYSASKGAVNAFTKALAKELAPSG---IRVNAVAPGAIDTEMWSSFSEEDK-----EGL----AEEI-- 208 (247)
T ss_pred c---------cHHHHHHHHHHHHHHHHHHHHHHcC---eEEEEEEECCccCccccccChHHH-----HHH----HhcC--
Confidence 0 00 12233333333332221 247 999999999997765433322100 000 0000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
....+...+|+++++++++... ...|+.++|.+|.
T Consensus 209 --------~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~ 245 (247)
T PRK05565 209 --------PLGRLGKPEEIAKVVLFLASDDASYITGQIITVDGGW 245 (247)
T ss_pred --------CCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence 1123457899999988888643 3468999998774
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00012 Score=68.10 Aligned_cols=55 Identities=4% Similarity=-0.127 Sum_probs=39.6
Q ss_pred CCccEEEEeecccCC----------ChHHHHHhHHHHHHHHHHHhCcC----CCCCceEEEEeCCcccc
Q 045430 11 TDVTHIFYVTWASRP----------TEAENCEVNGAMLRNVLRSVIPN----APNLRHVCLQTGGKHYV 65 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~----~~~v~r~v~~Ss~~vYG 65 (309)
..+|+|||+|++... +++..+++|+.|+.++++++... ..+..|||++||..+|+
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 358999999984211 23456899999999998877532 11235999999988764
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00046 Score=61.70 Aligned_cols=153 Identities=9% Similarity=0.009 Sum_probs=89.2
Q ss_pred CCCCccEEEEeecccC--C-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASR--P-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~--~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|+|+|+|+... + +++..+++|+.++.++++++... ..+.++||++||...++.. .
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------~ 155 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV---------R 155 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC---------C
Confidence 3457899999998421 1 33446899999999998887431 0135789999998666421 0
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. ...+ ..+|.+.+.+++..+.+ ..+ +.++.++|+.|.++...+.+..-. .+.... ...|+
T Consensus 156 ~-----~~~Y---~~sK~a~~~~~~~la~e~~~~~---i~v~~i~Pg~i~t~~~~~~~~~~~---~~~~~~--~~~~~-- 217 (257)
T PRK09242 156 S-----GAPY---GMTKAALLQMTRNLAVEWAEDG---IRVNAVAPWYIRTPLTSGPLSDPD---YYEQVI--ERTPM-- 217 (257)
T ss_pred C-----Ccch---HHHHHHHHHHHHHHHHHHHHhC---eEEEEEEECCCCCcccccccCChH---HHHHHH--hcCCC--
Confidence 0 0000 13455556555544432 246 999999999998875433221100 011100 11121
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.-+...+|++.++.+++... ...|+.+++.+|.
T Consensus 218 ----------~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~ 252 (257)
T PRK09242 218 ----------RRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGGF 252 (257)
T ss_pred ----------CCCcCHHHHHHHHHHHhCcccccccCCEEEECCCe
Confidence 11234677898888777542 2458888886553
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00011 Score=65.39 Aligned_cols=137 Identities=11% Similarity=0.041 Sum_probs=77.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHH----HHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNV----LRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nl----l~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..+|.|+|+|+.... +.++.+++|+.|+.++ ++++++. +.+++|++||...+..
T Consensus 73 ~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~~~iv~~ss~~~~~~----------- 139 (256)
T PRK08017 73 NRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH--GEGRIVMTSSVMGLIS----------- 139 (256)
T ss_pred CCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc--CCCEEEEEcCcccccC-----------
Confidence 468999999984321 2345789999998775 6666665 4689999998633221
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHH--hcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVE--KRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~--~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.| ...+. ..+|...|.+...+.. ...+ ++++++||+.+..+-..+... . + ...+ +
T Consensus 140 -~~--~~~~Y---~~sK~~~~~~~~~l~~~~~~~~---i~v~~v~pg~~~t~~~~~~~~----------~-~-~~~~--~ 196 (256)
T PRK08017 140 -TP--GRGAY---AASKYALEAWSDALRMELRHSG---IKVSLIEPGPIRTRFTDNVNQ----------T-Q-SDKP--V 196 (256)
T ss_pred -CC--CccHH---HHHHHHHHHHHHHHHHHHhhcC---CEEEEEeCCCcccchhhcccc----------h-h-hccc--h
Confidence 10 00000 1234444544433221 1246 999999997664432111100 0 0 0111 1
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPY 186 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~ 186 (309)
...+. ..+++++++|+++++..++.++.
T Consensus 197 ~~~~~---~~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 197 ENPGI---AARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred hhhHH---HhhcCCCHHHHHHHHHHHHhCCC
Confidence 11121 33567899999999998886543
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00034 Score=62.42 Aligned_cols=156 Identities=10% Similarity=-0.057 Sum_probs=92.2
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...+|+|||+|+.... ++++.+++|+.++.++++++... ..+-.+||++||...+...
T Consensus 73 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------- 142 (252)
T PRK07856 73 HGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS---------- 142 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC----------
Confidence 3568999999984211 23457899999999999987542 1124689999997555321
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
....++ -.+|.+.+.+++..+.+. ++ .+.++.++|+.|..+.....+..- ..+..+. ...| .
T Consensus 143 ----~~~~~Y---~~sK~a~~~l~~~la~e~-~~-~i~v~~i~Pg~v~t~~~~~~~~~~---~~~~~~~--~~~~--~-- 204 (252)
T PRK07856 143 ----PGTAAY---GAAKAGLLNLTRSLAVEW-AP-KVRVNAVVVGLVRTEQSELHYGDA---EGIAAVA--ATVP--L-- 204 (252)
T ss_pred ----CCCchh---HHHHHHHHHHHHHHHHHh-cC-CeEEEEEEeccccChHHhhhccCH---HHHHHHh--hcCC--C--
Confidence 001110 134566677776666532 21 188999999988766322111100 0011110 1111 1
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
.-+...+|+++++++.+..+ ...|+.+.|.+|...+
T Consensus 205 --------~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 205 --------GRLATPADIAWACLFLASDLASYVSGANLEVHGGGERP 242 (252)
T ss_pred --------CCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence 12346788999988877543 3568999998877654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0004 Score=61.08 Aligned_cols=156 Identities=8% Similarity=-0.036 Sum_probs=89.9
Q ss_pred HHHhccCCCCccEEEEeecccC--C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASR--P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~--~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
+.+.+.....+|+|+|+|+... . ++++.+++|+.++.+++.++...-..-.++|++||......
T Consensus 66 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~------- 138 (237)
T PRK12742 66 VIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM------- 138 (237)
T ss_pred HHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC-------
Confidence 3344445556899999998421 1 33557899999999997666543112368999999643211
Q ss_pred CCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 74 IRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
|.....++ ..+|.+.|.+++..+.+ ..+ +.+++++|+.|..+......+ ....+.+
T Consensus 139 ------~~~~~~~Y---~~sKaa~~~~~~~la~~~~~~g---i~v~~v~Pg~~~t~~~~~~~~------~~~~~~~---- 196 (237)
T PRK12742 139 ------PVAGMAAY---AASKSALQGMARGLARDFGPRG---ITINVVQPGPIDTDANPANGP------MKDMMHS---- 196 (237)
T ss_pred ------CCCCCcch---HHhHHHHHHHHHHHHHHHhhhC---eEEEEEecCcccCCccccccH------HHHHHHh----
Confidence 11111110 14566677666554442 246 999999999887653211111 1111111
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
..+. .-+...+|+++++.+++... ...|+.+++.+|
T Consensus 197 ~~~~----------~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 197 FMAI----------KRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred cCCC----------CCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence 1111 11246788999988877543 345888888655
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00047 Score=61.60 Aligned_cols=154 Identities=13% Similarity=0.081 Sum_probs=90.1
Q ss_pred cCCCCccEEEEeecccCC--------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP--------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
+....+|+|||+|+.... ++++.+++|+.++.++++++... ..+-.+||++||....-.
T Consensus 84 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------- 152 (255)
T PRK06113 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK----------- 152 (255)
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC-----------
Confidence 344678999999984221 22334799999999999998631 002358999999754321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
..+ .+. -.+|.+.+.+++..+.+ ..+ +.++++.|+.|--+.-...+. -....... ...++
T Consensus 153 ~~~-------~~~Y~~sK~a~~~~~~~la~~~~~~~---i~v~~v~pg~~~t~~~~~~~~----~~~~~~~~--~~~~~- 215 (255)
T PRK06113 153 NIN-------MTSYASSKAAASHLVRNMAFDLGEKN---IRVNGIAPGAILTDALKSVIT----PEIEQKML--QHTPI- 215 (255)
T ss_pred CCC-------cchhHHHHHHHHHHHHHHHHHhhhhC---eEEEEEecccccccccccccC----HHHHHHHH--hcCCC-
Confidence 000 011 13456666666555432 245 888888898876543211110 00111111 11111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.-+...+|+++++++++... ...|+++++.+|...
T Consensus 216 -----------~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~~ 252 (255)
T PRK06113 216 -----------RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ 252 (255)
T ss_pred -----------CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCccc
Confidence 12457889999999888643 345999999988654
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00034 Score=61.60 Aligned_cols=147 Identities=14% Similarity=0.063 Sum_probs=82.7
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...+|+|||+|+...+ ++.+.+++|+.++.++++++ ++. +.++||++||...+..
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~---------- 143 (242)
T TIGR01829 76 LGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER--GWGRIINISSVNGQKG---------- 143 (242)
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEcchhhcCC----------
Confidence 4568999999984321 23445789999987765554 443 4679999998633321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
.+ . .+. ..+|...+.+++..+.+ ..+ +.++.++|+.+.++.......... ..+. .+.++
T Consensus 144 --~~--~----~~~y~~sk~a~~~~~~~la~~~~~~~---i~v~~i~pg~~~t~~~~~~~~~~~-----~~~~--~~~~~ 205 (242)
T TIGR01829 144 --QF--G----QTNYSAAKAGMIGFTKALAQEGATKG---VTVNTISPGYIATDMVMAMREDVL-----NSIV--AQIPV 205 (242)
T ss_pred --CC--C----cchhHHHHHHHHHHHHHHHHHhhhhC---eEEEEEeeCCCcCccccccchHHH-----HHHH--hcCCC
Confidence 00 0 001 12233333333333221 246 999999999998875432221110 0111 11121
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..+...+++++++.+++..+ ...|+.+.|.+|.
T Consensus 206 ------------~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 206 ------------GRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL 240 (242)
T ss_pred ------------CCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence 11234577898877766543 3458999998874
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00019 Score=64.09 Aligned_cols=156 Identities=7% Similarity=-0.073 Sum_probs=90.5
Q ss_pred CCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|.|||+|+.... +. ++.+++|+.++.++++++... ...-.+||++||...|+.. ..
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~---------~~ 153 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ---------PF 153 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC---------CC
Confidence 468999999984321 22 446799999999998887532 1113579999999877632 01
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH-HHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV-GTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~-~~~~i~~~l~~~~g~~~~~ 155 (309)
. .++ ..+|.+.|.+.+..+.+ ..+ +.++.++|+.++++......... .....+ +.... ...+
T Consensus 154 ~-----~~Y---~~sK~a~~~~~~~~a~e~~~~~---i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~--~~~~~-~~~~- 218 (260)
T PRK06198 154 L-----AAY---CASKGALATLTRNAAYALLRNR---IRVNGLNIGWMATEGEDRIQREFHGAPDDW--LEKAA-ATQP- 218 (260)
T ss_pred c-----chh---HHHHHHHHHHHHHHHHHhcccC---eEEEEEeeccccCcchhhhhhhccCCChHH--HHHHh-ccCC-
Confidence 0 000 13345555554443331 246 99999999999998642110000 000000 00000 0111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..-+.+++++++++++++..+ ...|+.+++.++..
T Consensus 219 ---------~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~~ 255 (260)
T PRK06198 219 ---------FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSVW 255 (260)
T ss_pred ---------ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCccc
Confidence 123567899999999877543 34689999987653
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00022 Score=62.56 Aligned_cols=142 Identities=13% Similarity=0.085 Sum_probs=86.3
Q ss_pred ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCcc--cchHHHHHHHHH
Q 045430 26 TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNVT--NFYYTQEDILFE 103 (309)
Q Consensus 26 ~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~p--~~~y~~e~~~~~ 103 (309)
....+.++|-+...|.+.|+.++ |++||||+|- .-||.+ + ..|.. ..|-.+|..+..
T Consensus 130 n~~~m~~ing~ani~a~kaa~~~--gv~~fvyISa-~d~~~~----------~--------~i~rGY~~gKR~AE~Ell~ 188 (283)
T KOG4288|consen 130 NIILMDRINGTANINAVKAAAKA--GVPRFVYISA-HDFGLP----------P--------LIPRGYIEGKREAEAELLK 188 (283)
T ss_pred chHHHHHhccHhhHHHHHHHHHc--CCceEEEEEh-hhcCCC----------C--------ccchhhhccchHHHHHHHH
Confidence 34567899999999999999987 7999999986 345432 1 11111 234445554443
Q ss_pred HHHhcCCCcceeEEeecCCceecccCC-Cc-chhHHHHHHHHHHHhHh---CCceeecCCccccccceeccCHHHHHHHH
Q 045430 104 EVEKRKGPLSLTWSVHRPHIIFGFSPY-SM-MNVVGTLCVYAAICKHE---GVPLLFPGSKDCWEGYSVASDADLIAEQH 178 (309)
Q Consensus 104 ~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~-~~~~~~~~i~~~l~~~~---g~~~~~~G~~~~~~~~~~~~~vd~la~a~ 178 (309)
+.+ ..-+||||+.+||.++- .+ .++-....-.-.+.+.. -..+++.|. -..-.+.++++|-+.
T Consensus 189 ----~~~---~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~-----l~~ppvnve~VA~aa 256 (283)
T KOG4288|consen 189 ----KFR---FRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGP-----LLAPPVNVESVALAA 256 (283)
T ss_pred ----hcC---CCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccccc-----ccCCCcCHHHHHHHH
Confidence 244 66699999999999662 22 11111111111111211 112566666 557788999999999
Q ss_pred HHHhcCCCCCCcceeecCCCcccHHHHHHHH
Q 045430 179 IWAAVDPYARNEAFNCSNGDVFKWKHLWKVL 209 (309)
Q Consensus 179 i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i 209 (309)
+-|+.+|.-. ..+++.|+-+.-
T Consensus 257 l~ai~dp~f~---------Gvv~i~eI~~~a 278 (283)
T KOG4288|consen 257 LKAIEDPDFK---------GVVTIEEIKKAA 278 (283)
T ss_pred HHhccCCCcC---------ceeeHHHHHHHH
Confidence 9888877432 346666665543
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00025 Score=63.21 Aligned_cols=98 Identities=9% Similarity=0.002 Sum_probs=60.8
Q ss_pred CCCCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCC
Q 045430 9 KLTDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
...++|+|+|+|+... + +.++.+++|+.|+.++++++ .+. +.++||++||...+..
T Consensus 71 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS~~~~~~-------- 140 (248)
T PRK10538 71 EWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER--NHGHIINIGSTAGSWP-------- 140 (248)
T ss_pred HcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEECCcccCCC--------
Confidence 3457999999998421 1 23456899999966655554 443 5689999999754421
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceeccc
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFS 128 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~ 128 (309)
.....+. ..+|...+.+.+..+.+ ..+ +.+++++|+.|.|+.
T Consensus 141 ------~~~~~~Y---~~sK~~~~~~~~~l~~~~~~~~---i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 141 ------YAGGNVY---GATKAFVRQFSLNLRTDLHGTA---VRVTDIEPGLVGGTE 184 (248)
T ss_pred ------CCCCchh---HHHHHHHHHHHHHHHHHhcCCC---cEEEEEeCCeecccc
Confidence 1000000 13455555555554432 245 999999999998764
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00051 Score=61.31 Aligned_cols=153 Identities=10% Similarity=-0.039 Sum_probs=88.6
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+|||+|+.... ++++.+++|+.++.++.+++.+. ..+.++||++||...+..
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------- 153 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA----------- 153 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC-----------
Confidence 34568999999984211 33446899999999999766431 014679999999754321
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.| ...+. ..+|.+.+.+++..+.+ ..+ +.++.|+|+.|.++.......-. .....+. ...+.
T Consensus 154 -~~--~~~~Y---~~sK~a~~~~~~~la~e~~~~~---i~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~----~~~~~ 217 (256)
T PRK06124 154 -RA--GDAVY---PAAKQGLTGLMRALAAEFGPHG---ITSNAIAPGYFATETNAAMAADP---AVGPWLA----QRTPL 217 (256)
T ss_pred -CC--CccHh---HHHHHHHHHHHHHHHHHHHHhC---cEEEEEEECCccCcchhhhccCh---HHHHHHH----hcCCC
Confidence 11 11110 13455555554443321 246 99999999999987532211100 0001111 11111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~ 198 (309)
..+..++|+++++++++..+. ..|+.+.+.+|.
T Consensus 218 ----------~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~ 252 (256)
T PRK06124 218 ----------GRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGY 252 (256)
T ss_pred ----------CCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCc
Confidence 135678999999998886542 348887776654
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00025 Score=63.30 Aligned_cols=161 Identities=11% Similarity=0.067 Sum_probs=86.5
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...++|+|||+|+.... +.++.+++|+.++.++++++.+. .+.-.+||++||...+...
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 146 (256)
T PRK08643 76 TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN--------- 146 (256)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC---------
Confidence 34568999999974211 22446789999988777766432 1112589999997544211
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.. ...+ -.+|...+.+++.++.+ ..+ +.++.++|+.|..|.-.... ..+....+.+..
T Consensus 147 ~~-----~~~Y---~~sK~a~~~~~~~la~e~~~~g---i~v~~i~Pg~v~t~~~~~~~---------~~~~~~~~~~~~ 206 (256)
T PRK08643 147 PE-----LAVY---SSTKFAVRGLTQTAARDLASEG---ITVNAYAPGIVKTPMMFDIA---------HQVGENAGKPDE 206 (256)
T ss_pred CC-----Cchh---HHHHHHHHHHHHHHHHHhcccC---cEEEEEeeCCCcChhhhHHH---------hhhccccCCCch
Confidence 00 0000 13455555555544432 246 99999999999776421100 000000011100
Q ss_pred ecCCcc--ccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 155 FPGSKD--CWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~--~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+ +... .-....-+...+++++++.+++..+ ...|+.+.|.+|..
T Consensus 207 ~-~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~~ 254 (256)
T PRK08643 207 W-GMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGMV 254 (256)
T ss_pred H-HHHHHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCee
Confidence 0 0000 0000112456889999988877543 35688888876643
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00048 Score=62.14 Aligned_cols=143 Identities=9% Similarity=-0.092 Sum_probs=78.5
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|+.... +.++.+++|+.++.++.+++ ++. +..+||++||...+...
T Consensus 75 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~--------- 143 (270)
T PRK05650 75 WGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ--KSGRIVNIASMAGLMQG--------- 143 (270)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC--CCCEEEEECChhhcCCC---------
Confidence 3568999999984221 22336789988887766664 444 46899999998665421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
| . .+. ..+|.+.+.+.+.+..+ ..+ +.+++++|+.|..+.......... .+.+.....+
T Consensus 144 ---~--~----~~~Y~~sKaa~~~~~~~l~~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~------~~~~~~~~~~ 205 (270)
T PRK05650 144 ---P--A----MSSYNVAKAGVVALSETLLVELADDE---IGVHVVCPSFFQTNLLDSFRGPNP------AMKAQVGKLL 205 (270)
T ss_pred ---C--C----chHHHHHHHHHHHHHHHHHHHhcccC---cEEEEEecCccccCcccccccCch------hHHHHHHHHh
Confidence 0 0 000 01233322223333321 246 999999999998774332211000 0000000000
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSN 196 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~ 196 (309)
....+.++|+|++++.++.+ ++.+.+..
T Consensus 206 -----------~~~~~~~~~vA~~i~~~l~~----~~~~~~~~ 233 (270)
T PRK05650 206 -----------EKSPITAADIADYIYQQVAK----GEFLILPH 233 (270)
T ss_pred -----------hcCCCCHHHHHHHHHHHHhC----CCEEEecC
Confidence 01346789999999988864 23455543
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00068 Score=60.09 Aligned_cols=150 Identities=11% Similarity=0.075 Sum_probs=84.4
Q ss_pred CCCCccEEEEeecccCC-------C---hHHHHHhHHHHHHHHHHHhCcCC-CC----CceEEEEeCCcc-ccCCccccC
Q 045430 9 KLTDVTHIFYVTWASRP-------T---EAENCEVNGAMLRNVLRSVIPNA-PN----LRHVCLQTGGKH-YVGPFESFG 72 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~-------~---~~~~~~vNv~gt~nll~a~~~~~-~~----v~r~v~~Ss~~v-YG~~~~~~~ 72 (309)
.+..+|+|||+|+.... + .+..+++|+.++.++++++.+.. .. -.+||++||... +|.+
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----- 151 (248)
T PRK06947 77 AFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP----- 151 (248)
T ss_pred hcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-----
Confidence 34578999999984211 2 23458999999988876543321 00 135999998754 3321
Q ss_pred CCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHh
Q 045430 73 KIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~ 149 (309)
. +. .++ ..+|.+.+.+++..+.+ ..+ +.++++||+.|..+... .-... .. +..
T Consensus 152 -----~-~~---~~Y---~~sK~~~~~~~~~la~~~~~~~---i~v~~i~Pg~v~t~~~~~~~~~~--------~~-~~~ 207 (248)
T PRK06947 152 -----N-EY---VDY---AGSKGAVDTLTLGLAKELGPHG---VRVNAVRPGLIETEIHASGGQPG--------RA-ARL 207 (248)
T ss_pred -----C-CC---ccc---HhhHHHHHHHHHHHHHHhhhhC---cEEEEEeccCcccccccccCCHH--------HH-HHH
Confidence 0 00 000 13466666555554432 246 99999999999887421 11110 00 001
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNG 197 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g 197 (309)
+...+. . . ...++|+++.+++++..+. ..|+.+.+.+|
T Consensus 208 ~~~~~~--~-----~---~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 208 GAQTPL--G-----R---AGEADEVAETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred hhcCCC--C-----C---CcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence 111111 1 1 2357889999888876542 46887777654
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00078 Score=60.19 Aligned_cols=151 Identities=12% Similarity=0.004 Sum_probs=85.5
Q ss_pred CCCccEEEEeecccCC-----------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCC-ccccCCccccCC
Q 045430 10 LTDVTHIFYVTWASRP-----------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGG-KHYVGPFESFGK 73 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~-----------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~-~vYG~~~~~~~~ 73 (309)
...+|+|||+|+...+ .+++.+++|+.|+.++++++. +. +-.++|++||. .+||.+
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~~sS~~~~~g~~------ 148 (255)
T PRK06057 77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ--GKGSIINTASFVAVMGSA------ 148 (255)
T ss_pred cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh--CCcEEEEEcchhhccCCC------
Confidence 3468999999984211 134578899999988877764 22 24589988885 355521
Q ss_pred CCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 74 IRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
... ..+ ..+|.+.+.+.+..+.+ ..+ +.++++||+.|.+|.....+..-. ....+.. .
T Consensus 149 ---~~~-----~~Y---~~sKaal~~~~~~l~~~~~~~g---i~v~~i~pg~v~t~~~~~~~~~~~-----~~~~~~~-~ 208 (255)
T PRK06057 149 ---TSQ-----ISY---TASKGGVLAMSRELGVQFARQG---IRVNALCPGPVNTPLLQELFAKDP-----ERAARRL-V 208 (255)
T ss_pred ---CCC-----cch---HHHHHHHHHHHHHHHHHHHhhC---cEEEEEeeCCcCCchhhhhccCCH-----HHHHHHH-h
Confidence 000 000 12344333344432221 246 999999999998875432211000 0011101 0
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.++ . -.+..++++++++.+.+... ...|+.|.|.+|.
T Consensus 209 ~~~---~-------~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (255)
T PRK06057 209 HVP---M-------GRFAEPEEIAAAVAFLASDDASFITASTFLVDGGI 247 (255)
T ss_pred cCC---C-------CCCcCHHHHHHHHHHHhCccccCccCcEEEECCCe
Confidence 111 1 14577899999987766543 3458999887664
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00017 Score=63.60 Aligned_cols=105 Identities=12% Similarity=-0.092 Sum_probs=66.5
Q ss_pred HHHhccCCCCccEEEEeecc-cCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccc
Q 045430 3 TQAKLSKLTDVTHIFYVTWA-SRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFES 70 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~-~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~ 70 (309)
+++.++.+..+|.|||+|+. ... ++.+.+++|+.++.++++++... ..+..+||++||...|...
T Consensus 64 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~--- 140 (238)
T PRK08264 64 VAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF--- 140 (238)
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC---
Confidence 44555566678999999985 211 23446789999999999997532 0145789999998766421
Q ss_pred cCCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 71 FGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 71 ~~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
. +. . +-..+|...+.+....+.+ ..+ ++++++||+.|.++
T Consensus 141 -------~-~~---~---~y~~sK~a~~~~~~~l~~~~~~~~---i~~~~v~pg~v~t~ 182 (238)
T PRK08264 141 -------P-NL---G---TYSASKAAAWSLTQALRAELAPQG---TRVLGVHPGPIDTD 182 (238)
T ss_pred -------C-Cc---h---HhHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeCCccccc
Confidence 0 00 0 0012345555554444332 146 99999999988664
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00041 Score=59.62 Aligned_cols=144 Identities=13% Similarity=0.064 Sum_probs=83.5
Q ss_pred HHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
+++.+..+.++|+|||+|+.... ++.+.+++|+.++.++++++...-.+-.+|+++||.....
T Consensus 46 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-------- 117 (199)
T PRK07578 46 IRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-------- 117 (199)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC--------
Confidence 45555666789999999984211 2344578999999999998764311235789888763221
Q ss_pred CCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh-cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 74 IRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK-RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~-~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
|......+ ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|= .+. . . .+..
T Consensus 118 ------~~~~~~~Y---~~sK~a~~~~~~~la~e~~~g---i~v~~i~Pg~v~----t~~-~---------~----~~~~ 167 (199)
T PRK07578 118 ------PIPGGASA---ATVNGALEGFVKAAALELPRG---IRINVVSPTVLT----ESL-E---------K----YGPF 167 (199)
T ss_pred ------CCCCchHH---HHHHHHHHHHHHHHHHHccCC---eEEEEEcCCccc----Cch-h---------h----hhhc
Confidence 11000000 02233344444433332 246 999999998762 221 0 0 0111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeec
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCS 195 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~ 195 (309)
+++. ..+..+|+|++++.++.. ...||+|+++
T Consensus 168 --~~~~--------~~~~~~~~a~~~~~~~~~-~~~g~~~~~~ 199 (199)
T PRK07578 168 --FPGF--------EPVPAARVALAYVRSVEG-AQTGEVYKVG 199 (199)
T ss_pred --CCCC--------CCCCHHHHHHHHHHHhcc-ceeeEEeccC
Confidence 2222 245788999998877764 3568898874
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00018 Score=65.34 Aligned_cols=93 Identities=13% Similarity=0.025 Sum_probs=59.1
Q ss_pred CccEEEEeecccCC---------ChHHHHHhHHHH----HHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 12 DVTHIFYVTWASRP---------TEAENCEVNGAM----LRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 12 ~vd~V~H~A~~~~~---------~~~~~~~vNv~g----t~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.+|+|||+|+.... +.++.+++|+.| ++++++++++. +..|||++||...+..
T Consensus 76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~--~~g~iv~isS~~~~~~------------ 141 (277)
T PRK05993 76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ--GQGRIVQCSSILGLVP------------ 141 (277)
T ss_pred CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc--CCCEEEEECChhhcCC------------
Confidence 68999999984321 224468999999 77788888776 5689999999643321
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHH--hcCCCcceeEEeecCCceecc
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVE--KRKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~--~~~~~~~~~~~ilRP~~VyGp 127 (309)
.| .... ..+|.+.+.+...... +..+ +.++++||+.|-.+
T Consensus 142 ~~------~~~~Y~asK~a~~~~~~~l~~el~~~g---i~v~~v~Pg~v~T~ 184 (277)
T PRK05993 142 MK------YRGAYNASKFAIEGLSLTLRMELQGSG---IHVSLIEPGPIETR 184 (277)
T ss_pred CC------ccchHHHHHHHHHHHHHHHHHHhhhhC---CEEEEEecCCccCc
Confidence 00 0011 1334455555443332 1257 99999999988554
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0013 Score=58.60 Aligned_cols=152 Identities=9% Similarity=0.032 Sum_probs=89.4
Q ss_pred CCCCccEEEEeecccC--C-------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASR--P-------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~--~-------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+|+|+|+... + ++++.+++|+.++.++++++.... .+..|||++||....... .
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~ 153 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR---------D 153 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC---------C
Confidence 3456899999998421 1 334578999999999888876431 135789999997433110 0
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .+. ..+|.+.+.+++..+.+ ..+ +.++.++|+.+..+.......... +....+ ...|+
T Consensus 154 ~---------~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~pG~~~t~~~~~~~~~~~----~~~~~~-~~~p~- 215 (254)
T PRK08085 154 T---------ITPYAASKGAVKMLTRGMCVELARHN---IQVNGIAPGYFKTEMTKALVEDEA----FTAWLC-KRTPA- 215 (254)
T ss_pred C---------CcchHHHHHHHHHHHHHHHHHHHhhC---eEEEEEEeCCCCCcchhhhccCHH----HHHHHH-hcCCC-
Confidence 1 011 13466666666665442 247 999999999998874322111000 000001 11121
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
.-+...+|+++++++.+.. ....|+..-+.+|.
T Consensus 216 -----------~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~ 250 (254)
T PRK08085 216 -----------ARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGM 250 (254)
T ss_pred -----------CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence 1244678899988887764 23468877776553
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0012 Score=62.04 Aligned_cols=140 Identities=11% Similarity=0.032 Sum_probs=77.7
Q ss_pred CCCCccEEEEeecccCC------Ch---HHHHHhHHHHHHH----HHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP------TE---AENCEVNGAMLRN----VLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~n----ll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|++||+|+.... +. +..+++|+.|+.+ ++..+++. +..+||++||...|...
T Consensus 82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~--~~g~iV~isS~~~~~~~-------- 151 (334)
T PRK07109 82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR--DRGAIIQVGSALAYRSI-------- 151 (334)
T ss_pred HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEeCChhhccCC--------
Confidence 34578999999984211 22 3356777666555 55555554 35789999999777531
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHH----HHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEE----VEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~----~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
|. ... ..+|.+.+.+.... ..+..+ +.+++++|+.|-.|.... .. ...+
T Consensus 152 ----~~------~~~Y~asK~a~~~~~~~l~~el~~~~~~---I~v~~v~Pg~v~T~~~~~----~~---------~~~~ 205 (334)
T PRK07109 152 ----PL------QSAYCAAKHAIRGFTDSLRCELLHDGSP---VSVTMVQPPAVNTPQFDW----AR---------SRLP 205 (334)
T ss_pred ----Cc------chHHHHHHHHHHHHHHHHHHHHhhcCCC---eEEEEEeCCCccCchhhh----hh---------hhcc
Confidence 10 000 02233333332222 221246 999999999987653211 00 0001
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSN 196 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~ 196 (309)
.. .. ....+...+|+|+++++++.++ ++.++|+.
T Consensus 206 ~~-~~--------~~~~~~~pe~vA~~i~~~~~~~---~~~~~vg~ 239 (334)
T PRK07109 206 VE-PQ--------PVPPIYQPEVVADAILYAAEHP---RRELWVGG 239 (334)
T ss_pred cc-cc--------CCCCCCCHHHHHHHHHHHHhCC---CcEEEeCc
Confidence 00 00 0113456899999999999765 34666664
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00081 Score=60.40 Aligned_cols=163 Identities=8% Similarity=-0.087 Sum_probs=90.1
Q ss_pred CCCCccEEEEeecccC--C----C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASR--P----T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~--~----~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+|||+|+... + + +++.+++|+.|+.++++++... ..+-.+||++||...+...
T Consensus 69 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 138 (258)
T PRK06398 69 KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT---------- 138 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC----------
Confidence 4457899999998421 1 2 3445799999999998887532 0134799999998666421
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
. ....+ ..+|.+.+.+.+..+.+. .. +.++.++|+.|-.+-..........- -.....+ .+...
T Consensus 139 ~----~~~~Y---~~sKaal~~~~~~la~e~~~~---i~vn~i~PG~v~T~~~~~~~~~~~~~-~~~~~~~----~~~~~ 203 (258)
T PRK06398 139 R----NAAAY---VTSKHAVLGLTRSIAVDYAPT---IRCVAVCPGSIRTPLLEWAAELEVGK-DPEHVER----KIREW 203 (258)
T ss_pred C----CCchh---hhhHHHHHHHHHHHHHHhCCC---CEEEEEecCCccchHHhhhhhccccC-ChhhhHH----HHHhh
Confidence 0 00010 145677777776666531 23 88899999887554211100000000 0000000 00000
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+... ....+...+|+|+++++.+..+ ...|+.+.+..|..
T Consensus 204 ~~~~---~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~~ 245 (258)
T PRK06398 204 GEMH---PMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGLR 245 (258)
T ss_pred hhcC---CcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCccc
Confidence 0000 1123557899999988877643 34688888877753
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0017 Score=58.00 Aligned_cols=153 Identities=7% Similarity=-0.064 Sum_probs=86.4
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+|||+|+.... ++++.+++|+.++.++++++... ..+-.+||++||...+... .
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~ 153 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN---------R 153 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---------C
Confidence 34568999999984321 33456889999998877765321 0134689999997644311 0
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
..+ .+. ..+|.+.+.+++..+.+ ..+ +.+++++|+.|.++-.... .... ....+.+ ..|+
T Consensus 154 ~~~-------~~~Y~~sKaa~~~l~~~la~e~~~~g---i~v~~v~PG~i~t~~~~~~-~~~~---~~~~~~~--~~p~- 216 (254)
T PRK06114 154 GLL-------QAHYNASKAGVIHLSKSLAMEWVGRG---IRVNSISPGYTATPMNTRP-EMVH---QTKLFEE--QTPM- 216 (254)
T ss_pred CCC-------cchHHHHHHHHHHHHHHHHHHHhhcC---eEEEEEeecCccCcccccc-cchH---HHHHHHh--cCCC-
Confidence 100 011 12344444444444432 257 9999999999988643211 0000 0011111 1121
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
| -+..++|+++++++.+... ...|+++.|..|.
T Consensus 217 --~---------r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~ 251 (254)
T PRK06114 217 --Q---------RMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGF 251 (254)
T ss_pred --C---------CCcCHHHHHHHHHHHcCccccCcCCceEEECcCE
Confidence 1 1345788999988877542 3568998887664
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0014 Score=58.34 Aligned_cols=151 Identities=9% Similarity=-0.079 Sum_probs=86.2
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC----C------CCCceEEEEeCCccccCCcc
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN----A------PNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~----~------~~v~r~v~~Ss~~vYG~~~~ 69 (309)
....+|+|+|+|+.... +++..+++|+.++.++++++... . ..-.++|++||...+...
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-- 160 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL-- 160 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC--
Confidence 34568999999984211 33456899999999999887521 1 012589999997655321
Q ss_pred ccCCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh
Q 045430 70 SFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK 147 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~ 147 (309)
| ...++ ..+|...+.+++.++.+ ..+ +.++++||+.|+++...+.... . ....+.+
T Consensus 161 ----------~--~~~~Y---~~sK~a~~~~~~~la~~~~~~~---i~v~~v~pG~v~t~~~~~~~~~-~---~~~~~~~ 218 (258)
T PRK06949 161 ----------P--QIGLY---CMSKAAVVHMTRAMALEWGRHG---INVNAICPGYIDTEINHHHWET-E---QGQKLVS 218 (258)
T ss_pred ----------C--CccHH---HHHHHHHHHHHHHHHHHHHhcC---eEEEEEeeCCCcCCcchhccCh-H---HHHHHHh
Confidence 0 00000 12345555555444332 246 9999999999999865332110 0 0011111
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
.++. ..+.-.+|+++++.+++..+ ...|+..-+.+|
T Consensus 219 ----~~~~----------~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg 256 (258)
T PRK06949 219 ----MLPR----------KRVGKPEDLDGLLLLLAADESQFINGAIISADDG 256 (258)
T ss_pred ----cCCC----------CCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence 1111 13344678999988877632 245776666544
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0018 Score=58.26 Aligned_cols=153 Identities=10% Similarity=0.004 Sum_probs=86.0
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.+.++|+|||+|+.... ++++.+++|+.++.++++++... ..+.++||++||...+.
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~----------- 152 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL----------- 152 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------
Confidence 34578999999984211 33557899999999999998631 01347899999863221
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
|. +..+. ..+|.+.+.+++....+. .. +.++.++|+.|-.+.-....... .+...+ .+. .+
T Consensus 153 ---~~----~~~~~Y~~sK~a~~~~~~~~~~e~~~~---i~v~~i~Pg~v~t~~~~~~~~~~---~~~~~~---~~~-~~ 215 (263)
T PRK07814 153 ---AG----RGFAAYGTAKAALAHYTRLAALDLCPR---IRVNAIAPGSILTSALEVVAAND---ELRAPM---EKA-TP 215 (263)
T ss_pred ---CC----CCCchhHHHHHHHHHHHHHHHHHHCCC---ceEEEEEeCCCcCchhhhccCCH---HHHHHH---Hhc-CC
Confidence 10 00001 133455555555555431 23 78899999887654211100000 000000 010 11
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
......++|+++++++++... ...|+.+.+.+|..
T Consensus 216 ----------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~ 252 (263)
T PRK07814 216 ----------LRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGLT 252 (263)
T ss_pred ----------CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCcc
Confidence 112457889999999988642 34688888866543
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0012 Score=59.84 Aligned_cols=152 Identities=6% Similarity=-0.011 Sum_probs=88.0
Q ss_pred CCCCccEEEEeecccCC------------------------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeC
Q 045430 9 KLTDVTHIFYVTWASRP------------------------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTG 60 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------------------------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss 60 (309)
....+|+|||+|+...+ ++++.+++|+.++..++.++ .+. +-.+||++||
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~ii~isS 161 (278)
T PRK08277 84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR--KGGNIINISS 161 (278)
T ss_pred HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCcEEEEEcc
Confidence 34578999999983211 23446789999988665554 333 3468999999
Q ss_pred CccccCCccccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH
Q 045430 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG 137 (309)
Q Consensus 61 ~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~ 137 (309)
...|... .. .+. ..+|.+.+.+++..+.+ ..+ +.+..|+|+.|..+.....+..-
T Consensus 162 ~~~~~~~---------~~---------~~~Y~~sK~a~~~l~~~la~e~~~~g---irvn~v~Pg~v~t~~~~~~~~~~- 219 (278)
T PRK08277 162 MNAFTPL---------TK---------VPAYSAAKAAISNFTQWLAVHFAKVG---IRVNAIAPGFFLTEQNRALLFNE- 219 (278)
T ss_pred chhcCCC---------CC---------CchhHHHHHHHHHHHHHHHHHhCccC---eEEEEEEeccCcCcchhhhhccc-
Confidence 8777521 00 011 13456666666655543 246 99999999999887432211000
Q ss_pred HHHHHHHH-HhH-hCCceeecCCccccccceeccCHHHHHHHHHHHhcC-C--CCCCcceeecCC
Q 045430 138 TLCVYAAI-CKH-EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD-P--YARNEAFNCSNG 197 (309)
Q Consensus 138 ~~~i~~~l-~~~-~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~-~--~a~g~~fNI~~g 197 (309)
-..+... .+. ...| ..-+...+|+|+++++.+.. . ...|+...|..|
T Consensus 220 -~~~~~~~~~~~~~~~p------------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 220 -DGSLTERANKILAHTP------------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred -cccchhHHHHHhccCC------------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 0000000 000 0111 12345678899999887765 3 245888888766
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00096 Score=58.63 Aligned_cols=143 Identities=8% Similarity=-0.101 Sum_probs=83.9
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..++|+|||+|+.... +.++.+++|+.++.++++++.+.. .+.++||++||...+... .
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~- 148 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF----------A- 148 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC----------C-
Confidence 4578999999984211 234568999999999998876431 135689999997544311 0
Q ss_pred CCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 80 PFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 80 p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
..... ..+|.+.+.+.+..+.+ ..+ ++++++||+.|..+..... + .
T Consensus 149 ---~~~~y---~~sk~a~~~~~~~~~~~~~~~g---i~v~~v~pg~~~t~~~~~~-------------------~----~ 196 (237)
T PRK07326 149 ---GGAAY---NASKFGLVGFSEAAMLDLRQYG---IKVSTIMPGSVATHFNGHT-------------------P----S 196 (237)
T ss_pred ---CCchH---HHHHHHHHHHHHHHHHHhcccC---cEEEEEeeccccCcccccc-------------------c----c
Confidence 00000 12233334344433321 246 9999999998866432110 0 0
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecCCCcc
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSNGDVF 200 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~g~~~ 200 (309)
.... ..+..+|++++++.++..+ ...+....+.++.+.
T Consensus 197 ~~~~-----~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~~~~~ 235 (237)
T PRK07326 197 EKDA-----WKIQPEDIAQLVLDLLKMPPRTLPSKIEVRPSRPP 235 (237)
T ss_pred hhhh-----ccCCHHHHHHHHHHHHhCCccccccceEEecCCCC
Confidence 0010 1256889999998888765 344566666666554
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0012 Score=58.70 Aligned_cols=157 Identities=9% Similarity=-0.027 Sum_probs=86.0
Q ss_pred CCCCccEEEEeecccC------C---ChHHHHHhHHHHHHHHHHHhCc----CCCCCceEEEEeCCcc-ccCCccccCCC
Q 045430 9 KLTDVTHIFYVTWASR------P---TEAENCEVNGAMLRNVLRSVIP----NAPNLRHVCLQTGGKH-YVGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~------~---~~~~~~~vNv~gt~nll~a~~~----~~~~v~r~v~~Ss~~v-YG~~~~~~~~~ 74 (309)
....+|+|||+|+... . +.++.+++|+.++.++++++.. .+. -++||++||... +|.+
T Consensus 74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------- 145 (254)
T TIGR02415 74 KFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH-GGKIINAASIAGHEGNP------- 145 (254)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-CeEEEEecchhhcCCCC-------
Confidence 3456899999998421 1 2245689999999877766543 221 268999988643 3321
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. ..++ ..+|...+.+++..+.+ ..+ +.+++++|+.|..+....... ...+..+.
T Consensus 146 ---~-----~~~Y---~~sK~a~~~~~~~l~~~~~~~~---i~v~~v~Pg~i~t~~~~~~~~---------~~~~~~~~- 201 (254)
T TIGR02415 146 ---I-----LSAY---SSTKFAVRGLTQTAAQELAPKG---ITVNAYCPGIVKTPMWEEIDE---------ETSEIAGK- 201 (254)
T ss_pred ---C-----Ccch---HHHHHHHHHHHHHHHHHhcccC---eEEEEEecCcccChhhhhhhh---------hhhhcccC-
Confidence 0 0000 13456666666554432 236 999999999986654221110 00010011
Q ss_pred eeecCCcccc---ccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC
Q 045430 153 LLFPGSKDCW---EGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~---~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~ 198 (309)
++......+ ....-+..++|+++++.+++..+. ..|+...+.+|.
T Consensus 202 -~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~ 251 (254)
T TIGR02415 202 -PIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGGM 251 (254)
T ss_pred -chHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCCc
Confidence 111000000 112236778999999998887542 346666665553
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0023 Score=57.28 Aligned_cols=151 Identities=9% Similarity=-0.010 Sum_probs=88.4
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|++||+|+.... ++++.+++|+.++.++++++... ..+-.++|++||...|... ..
T Consensus 89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~ 159 (258)
T PRK06935 89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG---------KF 159 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC---------CC
Confidence 3468999999984211 33446789999988777665432 1135789999998776421 01
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. +. ..+|.+.+.+++..+.+ ..+ +.+++++|+.|..+........-. ....+.+ .++.
T Consensus 160 ~---------~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~i~PG~v~t~~~~~~~~~~~---~~~~~~~----~~~~ 220 (258)
T PRK06935 160 V---------PAYTASKHGVAGLTKAFANELAAYN---IQVNAIAPGYIKTANTAPIRADKN---RNDEILK----RIPA 220 (258)
T ss_pred c---------hhhHHHHHHHHHHHHHHHHHhhhhC---eEEEEEEeccccccchhhcccChH---HHHHHHh----cCCC
Confidence 0 11 13466666665555442 246 999999999987763211110000 0001111 1111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.-+...+|++...++.+... ...|+++.+.+|.
T Consensus 221 ----------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~ 255 (258)
T PRK06935 221 ----------GRWGEPDDLMGAAVFLASRASDYVNGHILAVDGGW 255 (258)
T ss_pred ----------CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence 12455678999888877543 3468999888764
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.001 Score=58.95 Aligned_cols=99 Identities=9% Similarity=-0.040 Sum_probs=60.6
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|+|||+|++... ...+.+++|+.++.++++++... ..+.++||++||...+...
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 147 (248)
T PRK08251 78 ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL---------- 147 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----------
Confidence 44578999999985322 12346789999999998887421 1146799999996543211
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
..+. .. ..+|.+.+.++..+..+ ..+ +.++.++|+.|.++
T Consensus 148 ~~~~-------~~Y~~sK~a~~~~~~~l~~~~~~~~---i~v~~v~pg~v~t~ 190 (248)
T PRK08251 148 PGVK-------AAYAASKAGVASLGEGLRAELAKTP---IKVSTIEPGYIRSE 190 (248)
T ss_pred CCCc-------ccHHHHHHHHHHHHHHHHHHhcccC---cEEEEEecCcCcch
Confidence 1000 00 12344444444444432 135 89999999998764
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00077 Score=60.35 Aligned_cols=98 Identities=9% Similarity=-0.138 Sum_probs=60.8
Q ss_pred CCCCccEEEEeecccC-------C---ChHHHHHhHHHHHHHHHH----HhCcCCCCCceEEEEeCCccccCCccccCCC
Q 045430 9 KLTDVTHIFYVTWASR-------P---TEAENCEVNGAMLRNVLR----SVIPNAPNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~-------~---~~~~~~~vNv~gt~nll~----a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
....+|+|||+|+... . ++++.+++|+.|+.++++ ++++. +..+||++||...+...
T Consensus 75 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~--~~~~iv~isS~~~~~~~------- 145 (257)
T PRK07024 75 AHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA--RRGTLVGIASVAGVRGL------- 145 (257)
T ss_pred hCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc--CCCEEEEEechhhcCCC-------
Confidence 3445899999998421 1 234578999999999777 45444 35789999986544211
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHHHHHHHHH--hcCCCcceeEEeecCCceeccc
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQEDILFEEVE--KRKGPLSLTWSVHRPHIIFGFS 128 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~--~~~~~~~~~~~ilRP~~VyGp~ 128 (309)
| ....+ ..+|.+.+.++..... +..+ ++++++||+.|.++.
T Consensus 146 -----~--~~~~Y---~asK~a~~~~~~~l~~e~~~~g---i~v~~v~Pg~v~t~~ 188 (257)
T PRK07024 146 -----P--GAGAY---SASKAAAIKYLESLRVELRPAG---VRVVTIAPGYIRTPM 188 (257)
T ss_pred -----C--CCcch---HHHHHHHHHHHHHHHHHhhccC---cEEEEEecCCCcCch
Confidence 0 00000 1334555555544332 1257 999999999998753
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0013 Score=65.16 Aligned_cols=153 Identities=12% Similarity=0.048 Sum_probs=90.7
Q ss_pred CCCCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
....+|++||+|+... + ++++.+++|+.|+.++++++...-.+-.+||++||...+...
T Consensus 340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 408 (520)
T PRK06484 340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL----------- 408 (520)
T ss_pred HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC-----------
Confidence 3456899999998531 1 234568999999999998876542123689999998655321
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
| ..+. ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|..+.......... ..+..+.+ ..|+
T Consensus 409 -~------~~~~Y~asKaal~~l~~~la~e~~~~g---I~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~~~--~~~~-- 472 (520)
T PRK06484 409 -P------PRNAYCASKAAVTMLSRSLACEWAPAG---IRVNTVAPGYIETPAVLALKASGR--ADFDSIRR--RIPL-- 472 (520)
T ss_pred -C------CCchhHHHHHHHHHHHHHHHHHhhhhC---eEEEEEEeCCccCchhhhhccccH--HHHHHHHh--cCCC--
Confidence 0 0011 13455555555544432 246 999999999998764322110000 00111111 1121
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.-+..++|+|+++++++..+ ...|+.+.+.+|.
T Consensus 473 ----------~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 473 ----------GRLGDPEEVAEAIAFLASPAASYVNGATLTVDGGW 507 (520)
T ss_pred ----------CCCcCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 12346889999988887643 3568999987664
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0023 Score=57.67 Aligned_cols=153 Identities=10% Similarity=-0.014 Sum_probs=86.1
Q ss_pred cCCCCccEEEEeecccCC------C--------------hHHHHHhHHHHHHHHHHHhCcCCC--------CCceEEEEe
Q 045430 8 SKLTDVTHIFYVTWASRP------T--------------EAENCEVNGAMLRNVLRSVIPNAP--------NLRHVCLQT 59 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~------~--------------~~~~~~vNv~gt~nll~a~~~~~~--------~v~r~v~~S 59 (309)
+...++|+|||+|+.... + ..+.+++|+.++.++++++..... .-.++|.+|
T Consensus 80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~ 159 (267)
T TIGR02685 80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC 159 (267)
T ss_pred HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence 344579999999984211 1 234689999999999887643210 112466665
Q ss_pred CCccccCCccccCCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH
Q 045430 60 GGKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG 137 (309)
Q Consensus 60 s~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~ 137 (309)
|..... |.....++ ..+|.+.+.+++..+.+ ..+ +.++.|+|+.|..|.+.. ..
T Consensus 160 s~~~~~--------------~~~~~~~Y---~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~~~~~~~~~--~~-- 215 (267)
T TIGR02685 160 DAMTDQ--------------PLLGFTMY---TMAKHALEGLTRSAALELAPLQ---IRVNGVAPGLSLLPDAMP--FE-- 215 (267)
T ss_pred hhhccC--------------CCcccchh---HHHHHHHHHHHHHHHHHHhhhC---eEEEEEecCCccCccccc--hh--
Confidence 542211 11000000 14466666665554432 246 999999999997664311 10
Q ss_pred HHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 138 TLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 138 ~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
..... ....++. ..+...+++++++++++..+ ...|+.+++.+|...
T Consensus 216 ---~~~~~----~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~ 264 (267)
T TIGR02685 216 ---VQEDY----RRKVPLG---------QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264 (267)
T ss_pred ---HHHHH----HHhCCCC---------cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence 00011 1111211 12346788999999888643 346899999877543
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0031 Score=56.33 Aligned_cols=151 Identities=5% Similarity=-0.082 Sum_probs=87.8
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CC-CceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PN-LRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~-v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
....+|++||+|+.... ++++.+++|+.++.++++++...- .+ =.++|++||...+...
T Consensus 82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 152 (253)
T PRK08993 82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG--------- 152 (253)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC---------
Confidence 34568999999984321 345578999999999998875420 01 1579999998777531
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
... +. ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|--+-.......-. ..+.....+
T Consensus 153 ~~~---------~~Y~~sKaa~~~~~~~la~e~~~~g---i~v~~v~pG~v~T~~~~~~~~~~~-------~~~~~~~~~ 213 (253)
T PRK08993 153 IRV---------PSYTASKSGVMGVTRLMANEWAKHN---INVNAIAPGYMATNNTQQLRADEQ-------RSAEILDRI 213 (253)
T ss_pred CCC---------cchHHHHHHHHHHHHHHHHHhhhhC---eEEEEEeeCcccCcchhhhccchH-------HHHHHHhcC
Confidence 011 11 13466666665554432 246 999999999986542211100000 000000112
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+. .-+.-.+++|+.+++.+... ...|+.+.+.+|
T Consensus 214 p~----------~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 214 PA----------GRWGLPSDLMGPVVFLASSASDYINGYTIAVDGG 249 (253)
T ss_pred CC----------CCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 21 11345688999988888643 345888877554
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0061 Score=54.25 Aligned_cols=151 Identities=10% Similarity=-0.016 Sum_probs=84.7
Q ss_pred CCCCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHH----HhCcCCCCCceEEEEeCCccccCCccccCCC
Q 045430 9 KLTDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLR----SVIPNAPNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~----a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
....+|++||+|+... + +.++.+++|+.++.++.. .+++. +-.+||++||...++..
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~~~iv~~sS~~~~~~~------- 150 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR--GGGSLIFTSTFVGHTAG------- 150 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEEechHhhccC-------
Confidence 3457899999998521 1 234468999987766654 44443 34689999998655321
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
.| ..+. ..+|.+.+.+++..+.+ ..+ +.++.++|+.|-.+-......... +....+ ...
T Consensus 151 ----~~------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~----~~~~~~-~~~ 212 (254)
T PRK07478 151 ----FP------GMAAYAASKAGLIGLTQVLAAEYGAQG---IRVNALLPGGTDTPMGRAMGDTPE----ALAFVA-GLH 212 (254)
T ss_pred ----CC------CcchhHHHHHHHHHHHHHHHHHHhhcC---EEEEEEeeCcccCcccccccCCHH----HHHHHH-hcC
Confidence 00 0011 13455555555544432 246 999999999986552111100000 000000 001
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+ ..-+...+|+++++++++..+ ...|+++.+..|.
T Consensus 213 ~------------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~ 249 (254)
T PRK07478 213 A------------LKRMAQPEEIAQAALFLASDAASFVTGTALLVDGGV 249 (254)
T ss_pred C------------CCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCch
Confidence 1 112446888999998888643 3458888886553
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.005 Score=54.19 Aligned_cols=148 Identities=9% Similarity=-0.012 Sum_probs=84.1
Q ss_pred ccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC-----cCCCCCceEEEEeCCccc-cCCcccc
Q 045430 7 LSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI-----PNAPNLRHVCLQTGGKHY-VGPFESF 71 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~-----~~~~~v~r~v~~Ss~~vY-G~~~~~~ 71 (309)
+.....+|.++|+|+.... ++++.+++|+.++.++++++. +. +.++||++||...+ |.+
T Consensus 71 ~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~---- 144 (239)
T TIGR01831 71 IAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR--QGGRIITLASVSGVMGNR---- 144 (239)
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc--CCeEEEEEcchhhccCCC----
Confidence 3345578999999984211 345578999999999998762 22 34689999996543 321
Q ss_pred CCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 72 GKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
.. ..+ ..+|++.+.+.+..+.+ ..+ +.++.++|+.|.++........ ..... .
T Consensus 145 ------~~-----~~Y---~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~------~~~~~--~ 199 (239)
T TIGR01831 145 ------GQ-----VNY---SAAKAGLIGATKALAVELAKRK---ITVNCIAPGLIDTEMLAEVEHD------LDEAL--K 199 (239)
T ss_pred ------CC-----cch---HHHHHHHHHHHHHHHHHHhHhC---eEEEEEEEccCccccchhhhHH------HHHHH--h
Confidence 10 000 12455554444333321 246 9999999999977643221110 00110 1
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
..|+ .-+...+|+++++++.+..+ ...|+...|.+|
T Consensus 200 ~~~~------------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg 237 (239)
T TIGR01831 200 TVPM------------NRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG 237 (239)
T ss_pred cCCC------------CCCCCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence 1121 11335688999999988643 244666555544
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0024 Score=57.41 Aligned_cols=155 Identities=9% Similarity=0.036 Sum_probs=87.9
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCc-cccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGK-HYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~-vYG~~~~~~~~~~~ 76 (309)
.+..+|+|+|+|+.... +..+.+++|+.|+..+++++... ..+..+||++||.. .+|.+
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 154 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE--------- 154 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC---------
Confidence 34568999999985321 22345789999988877776431 01357899999863 22211
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH--HHHHHHH-HHHhHhC
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV--GTLCVYA-AICKHEG 150 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~--~~~~i~~-~l~~~~g 150 (309)
. . +. ..+|.+.+.+++.++.+ ..+ +.++.|+|+.|..+......... .....+. .+.+ .
T Consensus 155 -~------~---~~Y~~sKaal~~l~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~ 219 (265)
T PRK07097 155 -T------V---SAYAAAKGGLKMLTKNIASEYGEAN---IQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIA--K 219 (265)
T ss_pred -C------C---ccHHHHHHHHHHHHHHHHHHhhhcC---ceEEEEEeccccccchhhhhhccccccchhHHHHHHh--c
Confidence 0 0 11 13455556665555542 246 99999999999887432111000 0000000 0000 0
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.| ..-+...+|+|+.+++++..+ ...|+.+++.+|..
T Consensus 220 ~~------------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~ 258 (265)
T PRK07097 220 TP------------AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGIL 258 (265)
T ss_pred CC------------ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCce
Confidence 11 112446788999988888652 35688888887754
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0027 Score=56.25 Aligned_cols=148 Identities=10% Similarity=0.053 Sum_probs=88.2
Q ss_pred ccEEEEeeccc--------CC-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCC
Q 045430 13 VTHIFYVTWAS--------RP-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 13 vd~V~H~A~~~--------~~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
+|.|||+|+.. .+ +..+.+++|+.++.++++++... ..+..++|++||..... +
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~-------- 152 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-P-------- 152 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-C--------
Confidence 89999999742 00 22346899999999999998532 11347899999863221 1
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
..|.. ++ ..+|.+.|.+++..+.+ ..+ +.++.++|+.|--+......+. ..+..+. ...
T Consensus 153 --~~~~~---~Y---~~sK~a~~~l~~~la~~~~~~~---i~v~~i~pG~v~t~~~~~~~~~----~~~~~~~----~~~ 213 (253)
T PRK08642 153 --VVPYH---DY---TTAKAALLGLTRNLAAELGPYG---ITVNMVSGGLLRTTDASAATPD----EVFDLIA----ATT 213 (253)
T ss_pred --CCCcc---ch---HHHHHHHHHHHHHHHHHhCccC---eEEEEEeecccCCchhhccCCH----HHHHHHH----hcC
Confidence 11110 00 24567777777776653 245 8999999998865421111110 0111111 112
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
++ ..+...+|+++++++++..+ ...|+.+.|.+|.
T Consensus 214 ~~----------~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~ 250 (253)
T PRK08642 214 PL----------RKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL 250 (253)
T ss_pred Cc----------CCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence 21 12567788999988888643 4568999888764
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0044 Score=55.07 Aligned_cols=152 Identities=8% Similarity=-0.062 Sum_probs=85.7
Q ss_pred CCCCccEEEEeeccc---CC----C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWAS---RP----T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~---~~----~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.+..+|+|+|+|+.. .+ + ++..+++|+.++.++++++... ..+..++|++||...+..
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------- 151 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP---------- 151 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC----------
Confidence 344689999999732 11 2 3446899999998888776322 114578999998643321
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.....++ ..+|.+.+.+++.++.+ ..+ ++++.+.|+.|-.+-........ ..+.... ...+
T Consensus 152 ----~~~~~~Y---~~sK~al~~~~~~l~~e~~~~g---i~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~----~~~~ 214 (252)
T PRK07035 152 ----GDFQGIY---SITKAAVISMTKAFAKECAPFG---IRVNALLPGLTDTKFASALFKND---AILKQAL----AHIP 214 (252)
T ss_pred ----CCCCcch---HHHHHHHHHHHHHHHHHHhhcC---EEEEEEeeccccCcccccccCCH---HHHHHHH----ccCC
Confidence 1000000 13466666666655542 246 99999999887544211111100 1111111 0111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+ ..+...+++|+++++.+... ...|+++++.+|
T Consensus 215 ~----------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 215 L----------RRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred C----------CCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 1 12346788999988877643 345888888655
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0041 Score=56.08 Aligned_cols=125 Identities=12% Similarity=0.013 Sum_probs=72.8
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+++|+|+.... +..+.+++|+.|+.++++++. +. +..+||++||...+...
T Consensus 76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~--------- 144 (273)
T PRK07825 76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR--GRGHVVNVASLAGKIPV--------- 144 (273)
T ss_pred cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEcCccccCCC---------
Confidence 3578999999984211 234467999998888776653 33 46799999997554321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
| .... ..+|.+.+.+......+ ..+ +.++++||+.|-.+ +. + +.+
T Consensus 145 ---~------~~~~Y~asKaa~~~~~~~l~~el~~~g---i~v~~v~Pg~v~t~----~~-------------~--~~~- 192 (273)
T PRK07825 145 ---P------GMATYCASKHAVVGFTDAARLELRGTG---VHVSVVLPSFVNTE----LI-------------A--GTG- 192 (273)
T ss_pred ---C------CCcchHHHHHHHHHHHHHHHHHhhccC---cEEEEEeCCcCcch----hh-------------c--ccc-
Confidence 0 0000 12333333332222211 257 99999999876332 11 0 111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
+. .....+.++|+|++++.++.++
T Consensus 193 ---~~-----~~~~~~~~~~va~~~~~~l~~~ 216 (273)
T PRK07825 193 ---GA-----KGFKNVEPEDVAAAIVGTVAKP 216 (273)
T ss_pred ---cc-----cCCCCCCHHHHHHHHHHHHhCC
Confidence 11 0123567999999999888764
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0022 Score=57.64 Aligned_cols=154 Identities=8% Similarity=-0.007 Sum_probs=86.0
Q ss_pred CCCccEEEEeecccC-----C---ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR-----P---TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----~---~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
...+|++||+|+... . ++++.+++|+.++.++++++...- .+-.++|++||....... ..
T Consensus 78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------~~-- 146 (261)
T PRK08265 78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ---------TG-- 146 (261)
T ss_pred hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC---------CC--
Confidence 356899999998421 1 334567999999999988765421 123689999987543211 01
Q ss_pred CCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 81 FTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 81 ~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
...+ ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|..+-..+...... ..+.. ......
T Consensus 147 ---~~~Y---~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~~~t~~~~~~~~~~~--~~~~~----~~~~~~---- 207 (261)
T PRK08265 147 ---RWLY---PASKAAIRQLTRSMAMDLAPDG---IRVNSVSPGWTWSRVMDELSGGDR--AKADR----VAAPFH---- 207 (261)
T ss_pred ---Cchh---HHHHHHHHHHHHHHHHHhcccC---EEEEEEccCCccChhhhhhcccch--hHHHH----hhcccC----
Confidence 0000 13455555555444432 246 999999999876542111100000 00000 000000
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...-+...+|+|+++.+++..+ ...|+.+.|.+|.
T Consensus 208 -----p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 208 -----LLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGY 244 (261)
T ss_pred -----CCCCccCHHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence 0112346889999999888643 3468999998875
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0045 Score=54.88 Aligned_cols=137 Identities=10% Similarity=0.070 Sum_probs=80.2
Q ss_pred CCCccEEEEeeccc-C--C-------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 10 LTDVTHIFYVTWAS-R--P-------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-~--~-------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
...+|+|||+|+.. . + .+++.+++|+.|+.++++++. +. +.++||++||...+...
T Consensus 90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~--~~~~iv~~ss~~~~~~~-------- 159 (247)
T PRK08945 90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS--PAASLVFTSSSVGRQGR-------- 159 (247)
T ss_pred hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC--CCCEEEEEccHhhcCCC--------
Confidence 34689999999842 1 1 235578999999999888874 33 46899999997543211
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
... .++ ..+|.+.+.++..++.+ ..+ +.+++++|+.|-.+-....
T Consensus 160 -~~~-----~~Y---~~sK~a~~~~~~~~~~~~~~~~---i~~~~v~pg~v~t~~~~~~--------------------- 206 (247)
T PRK08945 160 -ANW-----GAY---AVSKFATEGMMQVLADEYQGTN---LRVNCINPGGTRTAMRASA--------------------- 206 (247)
T ss_pred -CCC-----ccc---HHHHHHHHHHHHHHHHHhcccC---EEEEEEecCCccCcchhhh---------------------
Confidence 010 000 13455556655554432 135 8899999987755321100
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeec
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCS 195 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~ 195 (309)
++.... ..+...+++++.+++++..+. ..|+++-..
T Consensus 207 -~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 244 (247)
T PRK08945 207 -FPGEDP-----QKLKTPEDIMPLYLYLMGDDSRRKNGQSFDAQ 244 (247)
T ss_pred -cCcccc-----cCCCCHHHHHHHHHHHhCccccccCCeEEeCC
Confidence 000000 124567889999998875432 346665443
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0031 Score=56.40 Aligned_cols=157 Identities=13% Similarity=0.102 Sum_probs=85.6
Q ss_pred CCCCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+|||+|+.... + .++.+++|+.++.++++++... ..+..+||++||......
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------- 147 (263)
T PRK08226 79 KEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----------- 147 (263)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc-----------
Confidence 34568999999984211 2 2336899999999999987532 113468999998643211
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH---HHHHHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV---GTLCVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~---~~~~i~~~l~~~~g~~ 152 (309)
..| ....+ ..+|.+.+.+++.++.+ ..+ +.++.++|+.|.++-........ ..-..+..+. .+.|
T Consensus 148 ~~~--~~~~Y---~~sK~a~~~~~~~la~~~~~~~---i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~p 217 (263)
T PRK08226 148 ADP--GETAY---ALTKAAIVGLTKSLAVEYAQSG---IRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMA--KAIP 217 (263)
T ss_pred CCC--CcchH---HHHHHHHHHHHHHHHHHhcccC---cEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHh--ccCC
Confidence 000 00000 12344455555554432 136 99999999999887321110000 0000011110 1111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+ .-+...+++++++++.+... ...|+.+-+.+|.
T Consensus 218 ~------------~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~ 253 (263)
T PRK08226 218 L------------RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGS 253 (263)
T ss_pred C------------CCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCc
Confidence 1 12346788999888877532 3458888776664
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0019 Score=66.36 Aligned_cols=159 Identities=9% Similarity=-0.005 Sum_probs=87.2
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
...++|+|||+|+.... ++...+++|+.+..+++.++ ++.+ .-.+||++||...+...
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~-~~g~IV~iSS~~a~~~~-------- 560 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQG-LGGNIVFIASKNAVYAG-------- 560 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEeChhhcCCC--------
Confidence 34578999999985321 23446789998877665443 3321 12589999996543211
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCcee-cccCC-CcchhHHHHHHHHHHHhHhC
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIF-GFSPY-SMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~Vy-Gp~~~-~~~~~~~~~~i~~~l~~~~g 150 (309)
.. ... ..+|.+.+.+++.++.+ ..+ +.++.++|+.|+ |.+.. ..+... .. +..+
T Consensus 561 -~~---------~~aY~aSKaA~~~l~r~lA~el~~~g---IrVn~V~Pg~V~~~s~~~~~~~~~~------~~--~~~~ 619 (676)
T TIGR02632 561 -KN---------ASAYSAAKAAEAHLARCLAAEGGTYG---IRVNTVNPDAVLQGSGIWDGEWREE------RA--AAYG 619 (676)
T ss_pred -CC---------CHHHHHHHHHHHHHHHHHHHHhcccC---eEEEEEECCceecCcccccccchhh------hh--hccc
Confidence 00 001 13455566666655543 246 999999999997 43221 110000 00 0001
Q ss_pred Cce----eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 151 VPL----LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 151 ~~~----~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.+. .+..... .....++.+|+|+++.+++... ...|+++++.+|..-
T Consensus 620 ~~~~~~~~~~~~r~---~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~~ 672 (676)
T TIGR02632 620 IPADELEEHYAKRT---LLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVPA 672 (676)
T ss_pred CChHHHHHHHHhcC---CcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCchh
Confidence 100 0000111 2234578899999988776532 345899999887543
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0063 Score=54.07 Aligned_cols=151 Identities=9% Similarity=-0.025 Sum_probs=86.9
Q ss_pred CCccEEEEeecccCC----------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP----------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..+|+|||+|+.... ++++.+++|+.++.++++++... ..+..++|++||...++.. ..
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------~~ 153 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA---------PK 153 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC---------CC
Confidence 468999999984211 33446789999998776654321 0134789999998777531 00
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.+. ..+|.+.+.+++..+.+ ..+ +.++.++|+.|-.+.....+.... .....+ . ...+.
T Consensus 154 ---------~~~Y~~sKaa~~~~~~~la~e~~~~~---i~v~~i~PG~v~t~~~~~~~~~~~--~~~~~~---~-~~~~~ 215 (253)
T PRK06172 154 ---------MSIYAASKHAVIGLTKSAAIEYAKKG---IRVNAVCPAVIDTDMFRRAYEADP--RKAEFA---A-AMHPV 215 (253)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhcccC---eEEEEEEeCCccChhhhhhcccCh--HHHHHH---h-ccCCC
Confidence 011 13455555555555442 146 999999999885443211110000 000000 0 01111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.-+...+++++.+++++... ...|+.+++.+|.
T Consensus 216 ----------~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 216 ----------GRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred ----------CCccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 12346788999999888643 3569999998875
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0017 Score=57.86 Aligned_cols=90 Identities=13% Similarity=0.052 Sum_probs=55.1
Q ss_pred CccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 12 DVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 12 ~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
++|.|||+|+.... + .+..+++|+.++.++.++ +.+. +.+|||++||...+...
T Consensus 73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~~SS~~~~~~~----------- 139 (257)
T PRK09291 73 DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR--GKGKVVFTSSMAGLITG----------- 139 (257)
T ss_pred CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEEcChhhccCC-----------
Confidence 79999999984321 2 234678999987766554 4444 45899999997433211
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCce
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHII 124 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~V 124 (309)
|. ... ..+|...|.+....... ..+ +++++|||+.+
T Consensus 140 -~~------~~~Y~~sK~a~~~~~~~l~~~~~~~g---i~~~~v~pg~~ 178 (257)
T PRK09291 140 -PF------TGAYCASKHALEAIAEAMHAELKPFG---IQVATVNPGPY 178 (257)
T ss_pred -CC------cchhHHHHHHHHHHHHHHHHHHHhcC---cEEEEEecCcc
Confidence 10 001 13455556554443321 257 99999999876
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0046 Score=55.67 Aligned_cols=150 Identities=13% Similarity=0.060 Sum_probs=85.1
Q ss_pred CCCccEEEEeecccC--C-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR--P-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~--~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|+... + ++++.+++|+.|+.++++++... ..+ .+||++||...+...
T Consensus 84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~~----------- 151 (264)
T PRK07576 84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVPM----------- 151 (264)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccCC-----------
Confidence 457899999997321 1 22345789999999999987642 112 589999997544210
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceeccc-CCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFS-PYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~-~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
+..+. ..+|.+.+.+++....+ ..+ +.++.++|+.|.+.. .....+- ..+... ....++
T Consensus 152 -------~~~~~Y~asK~a~~~l~~~la~e~~~~g---i~v~~v~pg~~~~t~~~~~~~~~----~~~~~~---~~~~~~ 214 (264)
T PRK07576 152 -------PMQAHVCAAKAGVDMLTRTLALEWGPEG---IRVNSIVPGPIAGTEGMARLAPS----PELQAA---VAQSVP 214 (264)
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEecccccCcHHHhhcccC----HHHHHH---HHhcCC
Confidence 00011 13455555565554432 246 899999999887532 1111110 000000 000111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
. ......+|+|+++++++..+ ...|+.+.+.+|.
T Consensus 215 ~----------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~ 250 (264)
T PRK07576 215 L----------KRNGTKQDIANAALFLASDMASYITGVVLPVDGGW 250 (264)
T ss_pred C----------CCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCc
Confidence 1 12345788999988888643 2457877777664
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0034 Score=55.17 Aligned_cols=144 Identities=10% Similarity=0.015 Sum_probs=82.6
Q ss_pred CCCccEEEEeecccCC-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~ 82 (309)
..++|.|+|+|+.... +.+..+++|+.+..++++++...-..-.+||++||......+ .|
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~-- 145 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----------SP-- 145 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----------CC--
Confidence 3568999999874321 223457899999888888875531112579999886432111 00
Q ss_pred CCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 83 EDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 83 E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
..+. ..+|+..+.++.....+ ..+ ++++++||++|+|+-.... .+ + ..+ .. +
T Consensus 146 ----~~~~Y~~sK~~~~~~~~~~~~~~~~~g---i~v~~i~pg~v~~~~~~~~--------~~----~--~~~-~~-~-- 200 (238)
T PRK05786 146 ----DQLSYAVAKAGLAKAVEILASELLGRG---IRVNGIAPTTISGDFEPER--------NW----K--KLR-KL-G-- 200 (238)
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHhhcC---eEEEEEecCccCCCCCchh--------hh----h--hhc-cc-c--
Confidence 0001 13345555444443332 247 9999999999998742110 00 1 000 10 1
Q ss_pred cccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCC
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNG 197 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g 197 (309)
..++..+++++.+++++..+. ..|+.+.+.++
T Consensus 201 ------~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 201 ------DDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG 234 (238)
T ss_pred ------CCCCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence 123456789999998886532 45888888554
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0073 Score=53.12 Aligned_cols=146 Identities=7% Similarity=-0.068 Sum_probs=83.9
Q ss_pred CCCccEEEEeeccc-CC--------ChHHHHHhHHHHHHHHHHHhCcC----CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWAS-RP--------TEAENCEVNGAMLRNVLRSVIPN----APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-~~--------~~~~~~~vNv~gt~nll~a~~~~----~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|++||+|+.. .. +.++.+++|+.++.++..++... ..+-.++|++||.....
T Consensus 72 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~----------- 140 (236)
T PRK06483 72 TDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK----------- 140 (236)
T ss_pred CCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-----------
Confidence 34689999999842 11 23446799999998776665432 11135899998863221
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceec-ccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFG-FSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyG-p~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
..| ..+. ..+|.+.+.+++.++.+. .+ +.+..|+|+.|.- ..+...+ .... ....++
T Consensus 141 -~~~------~~~~Y~asKaal~~l~~~~a~e~~~~---irvn~v~Pg~~~~~~~~~~~~--------~~~~--~~~~~~ 200 (236)
T PRK06483 141 -GSD------KHIAYAASKAALDNMTLSFAAKLAPE---VKVNSIAPALILFNEGDDAAY--------RQKA--LAKSLL 200 (236)
T ss_pred -CCC------CCccHHHHHHHHHHHHHHHHHHHCCC---cEEEEEccCceecCCCCCHHH--------HHHH--hccCcc
Confidence 100 0011 134566666666666532 24 8999999998732 2211100 0011 011222
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~ 198 (309)
.. ....+|+++++.+.+......|+++.+.+|.
T Consensus 201 ~~------------~~~~~~va~~~~~l~~~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 201 KI------------EPGEEEIIDLVDYLLTSCYVTGRSLPVDGGR 233 (236)
T ss_pred cc------------CCCHHHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence 11 2246789999888886555678999887664
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0084 Score=52.84 Aligned_cols=133 Identities=12% Similarity=0.015 Sum_probs=79.5
Q ss_pred CCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..+|+|||+|+... + ++.+.+++|+.|+.++++++... ..+-.++|++||.. |.. .
T Consensus 86 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~--~~~----------~ 153 (239)
T PRK08703 86 GKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESH--GET----------P 153 (239)
T ss_pred CCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccc--ccc----------C
Confidence 46899999998421 1 22346799999999988887542 11346899998852 211 1
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHhc---CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEKR---KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~---~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.| .... ..+|.+.+.+++..+.+. .+ +.+++++|+.|++|......
T Consensus 154 ~~------~~~~Y~~sKaa~~~~~~~la~e~~~~~~---i~v~~v~pG~v~t~~~~~~~--------------------- 203 (239)
T PRK08703 154 KA------YWGGFGASKAALNYLCKVAADEWERFGN---LRANVLVPGPINSPQRIKSH--------------------- 203 (239)
T ss_pred CC------CccchHHhHHHHHHHHHHHHHHhccCCC---eEEEEEecCcccCccccccC---------------------
Confidence 11 0011 145666676666555431 25 89999999999987532111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEA 191 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~ 191 (309)
+|... ......+|++.++.+.+.. ....|++
T Consensus 204 -~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 236 (239)
T PRK08703 204 -PGEAK-----SERKSYGDVLPAFVWWASAESKGRSGEI 236 (239)
T ss_pred -CCCCc-----cccCCHHHHHHHHHHHhCccccCcCCeE
Confidence 11111 1234677899888888863 2344554
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0018 Score=57.11 Aligned_cols=130 Identities=9% Similarity=-0.106 Sum_probs=78.3
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
...+|.|||+|+.... +.++.+++|+.++.++++++... ..+..+||++||...|+.. ..
T Consensus 81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~ 151 (241)
T PRK07454 81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF---------PQ 151 (241)
T ss_pred cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC---------CC
Confidence 3468999999984211 33456899999988887776321 1145789999999777531 01
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.+. ..+|+..+.+.+..+.+ ..+ ++++++||+.|-.+-..... ....+
T Consensus 152 ---------~~~Y~~sK~~~~~~~~~~a~e~~~~g---i~v~~i~pg~i~t~~~~~~~-----------------~~~~~ 202 (241)
T PRK07454 152 ---------WGAYCVSKAALAAFTKCLAEEERSHG---IRVCTITLGAVNTPLWDTET-----------------VQADF 202 (241)
T ss_pred ---------ccHHHHHHHHHHHHHHHHHHHhhhhC---CEEEEEecCcccCCcccccc-----------------ccccc
Confidence 001 13355555554443321 247 99999999998665321100 00000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
. . .-.+..+|+|++++.++..+
T Consensus 203 ~-~-------~~~~~~~~va~~~~~l~~~~ 224 (241)
T PRK07454 203 D-R-------SAMLSPEQVAQTILHLAQLP 224 (241)
T ss_pred c-c-------ccCCCHHHHHHHHHHHHcCC
Confidence 0 0 12357899999999988765
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.016 Score=51.54 Aligned_cols=153 Identities=9% Similarity=0.003 Sum_probs=84.4
Q ss_pred CCCCccEEEEeecccC--C-------ChHHHHHhHHHHHHHHHHHhCcC--CCC-CceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASR--P-------TEAENCEVNGAMLRNVLRSVIPN--APN-LRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~--~-------~~~~~~~vNv~gt~nll~a~~~~--~~~-v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...++|+|+|+|+... + +++..+++|+.++.++++++.+. ..+ -.+||++||...+..
T Consensus 75 ~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~---------- 144 (252)
T PRK07677 75 KFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA---------- 144 (252)
T ss_pred HhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC----------
Confidence 3457899999997321 1 23557899999999999998432 111 368999988743321
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh---cCCCcceeEEeecCCceecccC-CCcchhHHHHHHHHHHHhHhCCc
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK---RKGPLSLTWSVHRPHIIFGFSP-YSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~---~~~~~~~~~~ilRP~~VyGp~~-~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. + ...++ -.+|.+.+.+.+..+.+ ..+ +.++.++|+.|.+... ......- .....+. ...+
T Consensus 145 -~-~--~~~~Y---~~sKaa~~~~~~~la~e~~~~~g---i~v~~v~PG~v~~~~~~~~~~~~~---~~~~~~~--~~~~ 209 (252)
T PRK07677 145 -G-P--GVIHS---AAAKAGVLAMTRTLAVEWGRKYG---IRVNAIAPGPIERTGGADKLWESE---EAAKRTI--QSVP 209 (252)
T ss_pred -C-C--CCcch---HHHHHHHHHHHHHHHHHhCcccC---eEEEEEeecccccccccccccCCH---HHHHHHh--ccCC
Confidence 0 0 00010 13455555554443332 247 9999999999985421 1110000 0001110 0111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+ .-+...+|+++++.+++..+ ...|+.+.+.+|.
T Consensus 210 --~----------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 210 --L----------GRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred --C----------CCCCCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence 1 12345677998877776542 3558888887664
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0067 Score=54.20 Aligned_cols=157 Identities=9% Similarity=-0.025 Sum_probs=87.6
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|++||+|+.... +++..+++|+.++.++++++... ..+-.+||++||...+...
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 152 (260)
T PRK07063 83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII---------- 152 (260)
T ss_pred HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC----------
Confidence 34578999999984211 33446789999999988886532 0134689999997544311
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH-HHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV-GTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~-~~~~i~~~l~~~~g~~~~ 154 (309)
| ...++ ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|-.+-........ ..... ..+... ..+
T Consensus 153 --~--~~~~Y---~~sKaa~~~~~~~la~el~~~g---Irvn~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~-~~~ 218 (260)
T PRK07063 153 --P--GCFPY---PVAKHGLLGLTRALGIEYAARN---VRVNAIAPGYIETQLTEDWWNAQPDPAAA---RAETLA-LQP 218 (260)
T ss_pred --C--CchHH---HHHHHHHHHHHHHHHHHhCccC---eEEEEEeeCCccChhhhhhhhccCChHHH---HHHHHh-cCC
Confidence 0 00000 13456666665555442 246 99999999988544211100000 00000 000000 111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
. .-+...+|+++++++++..+ ...|+...+..|..
T Consensus 219 ~----------~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~ 255 (260)
T PRK07063 219 M----------KRIGRPEEVAMTAVFLASDEAPFINATCITIDGGRS 255 (260)
T ss_pred C----------CCCCCHHHHHHHHHHHcCccccccCCcEEEECCCee
Confidence 1 11345788999999887643 35688888877654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0098 Score=53.09 Aligned_cols=151 Identities=11% Similarity=0.013 Sum_probs=86.2
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
....+|+++|+|+.... +++..+++|+.++.++.+++... ...-.++|++||...|...
T Consensus 80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~--------- 150 (251)
T PRK12481 80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG--------- 150 (251)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC---------
Confidence 34578999999984221 33446799999998888876432 1112589999998766421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
... +. ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|-.+........ . .....+. . .+
T Consensus 151 ~~~---------~~Y~asK~a~~~l~~~la~e~~~~g---irvn~v~PG~v~t~~~~~~~~~-~--~~~~~~~--~--~~ 211 (251)
T PRK12481 151 IRV---------PSYTASKSAVMGLTRALATELSQYN---INVNAIAPGYMATDNTAALRAD-T--ARNEAIL--E--RI 211 (251)
T ss_pred CCC---------cchHHHHHHHHHHHHHHHHHHhhcC---eEEEEEecCCCccCchhhcccC-h--HHHHHHH--h--cC
Confidence 011 11 13455555555444432 257 9999999998854421111000 0 0000110 0 11
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNG 197 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g 197 (309)
|. ..+...+|+++++.+.+.. ....|+...+..|
T Consensus 212 p~----------~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 212 PA----------SRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred CC----------CCCcCHHHHHHHHHHHhCccccCcCCceEEECCC
Confidence 11 1234578899998888753 2356888888665
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0029 Score=56.06 Aligned_cols=105 Identities=14% Similarity=0.001 Sum_probs=62.2
Q ss_pred HHHhccCCC-CccEEEEeeccc--CC----C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCc-cccCCcccc
Q 045430 3 TQAKLSKLT-DVTHIFYVTWAS--RP----T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGK-HYVGPFESF 71 (309)
Q Consensus 3 ~~~~~~~~~-~vd~V~H~A~~~--~~----~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~-vYG~~~~~~ 71 (309)
+++.+..+. +.|.++|.|+.. .+ + .++.+++|+.|+.++++++...-.+-+++|++||.. .++.+
T Consensus 61 ~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~---- 136 (240)
T PRK06101 61 TKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP---- 136 (240)
T ss_pred HHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC----
Confidence 334444332 468899998732 11 2 245789999999999999875311235789888853 22211
Q ss_pred CCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHH--hcCCCcceeEEeecCCceeccc
Q 045430 72 GKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVE--KRKGPLSLTWSVHRPHIIFGFS 128 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~--~~~~~~~~~~~ilRP~~VyGp~ 128 (309)
. . .++ -.+|.+.+.+.+.+.. +..+ +.++++||+.|+++-
T Consensus 137 ------~---~--~~Y---~asK~a~~~~~~~l~~e~~~~g---i~v~~v~pg~i~t~~ 178 (240)
T PRK06101 137 ------R---A--EAY---GASKAAVAYFARTLQLDLRPKG---IEVVTVFPGFVATPL 178 (240)
T ss_pred ------C---C--chh---hHHHHHHHHHHHHHHHHHHhcC---ceEEEEeCCcCCCCC
Confidence 0 0 000 1334555554443332 1257 999999999998864
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.014 Score=52.76 Aligned_cols=156 Identities=8% Similarity=-0.027 Sum_probs=86.3
Q ss_pred CCCCccEEEEeecccC---C----C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASR---P----T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~---~----~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
....+|++||+|+... . + ++..+++|+.++.++++++... ..+ .++|++||...+...
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 148 (272)
T PRK08589 79 QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD--------- 148 (272)
T ss_pred HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC---------
Confidence 3456899999998421 1 2 2345689999987777765432 113 589999998665421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH-HHHHHHHHHhHhCCc
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG-TLCVYAAICKHEGVP 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~-~~~i~~~l~~~~g~~ 152 (309)
.. ... ..+|.+.+.+++..+.+ ..+ +.++.+.|+.|..+...+....-. ... ..........
T Consensus 149 ~~---------~~~Y~asKaal~~l~~~la~e~~~~g---I~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~ 214 (272)
T PRK08589 149 LY---------RSGYNAAKGAVINFTKSIAIEYGRDG---IRANAIAPGTIETPLVDKLTGTSEDEAG--KTFRENQKWM 214 (272)
T ss_pred CC---------CchHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEecCcccCchhhhhcccchhhHH--HHHhhhhhcc
Confidence 00 011 13455555555555432 246 999999999987653221110000 000 0000000000
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.+ ..-+...+|+++++++.+..+ ...|+.+.+.+|.
T Consensus 215 ~~----------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 215 TP----------LGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred CC----------CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence 01 012346889999988877642 3468888887664
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0042 Score=55.56 Aligned_cols=97 Identities=12% Similarity=0.038 Sum_probs=60.1
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCcc-ccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKH-YVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~v-YG~~~~~~~~~~~~ 77 (309)
...+|+|+|+|+.... +.++.+++|+.++.++++++... ..+..+||++||... ||..
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------- 144 (260)
T PRK08267 75 GGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP---------- 144 (260)
T ss_pred CCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC----------
Confidence 3468999999984321 23557899999999998887431 013478999988643 3321
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
.. ... ..+|...+.+.+..+.+ ..+ ++++++||+.|-.+
T Consensus 145 ~~-----~~Y---~~sKaa~~~~~~~l~~~~~~~~---i~v~~i~pg~~~t~ 185 (260)
T PRK08267 145 GL-----AVY---SATKFAVRGLTEALDLEWRRHG---IRVADVMPLFVDTA 185 (260)
T ss_pred Cc-----hhh---HHHHHHHHHHHHHHHHHhcccC---cEEEEEecCCcCCc
Confidence 10 000 12345555555444432 246 99999999987553
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0027 Score=57.39 Aligned_cols=99 Identities=11% Similarity=-0.057 Sum_probs=60.0
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
...++|+|||+|+.... +.++.+++|+.|+.++++++... ..+..++|++||...+...
T Consensus 69 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 137 (274)
T PRK05693 69 EHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT----------- 137 (274)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC-----------
Confidence 34679999999984211 23446799999999999887431 0123679999886443211
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
|. ..++ ..+|.+.+.+......+ ..+ +.++++||+.|..+
T Consensus 138 -~~--~~~Y---~~sK~al~~~~~~l~~e~~~~g---i~v~~v~pg~v~t~ 179 (274)
T PRK05693 138 -PF--AGAY---CASKAAVHALSDALRLELAPFG---VQVMEVQPGAIASQ 179 (274)
T ss_pred -CC--ccHH---HHHHHHHHHHHHHHHHHhhhhC---eEEEEEecCccccc
Confidence 10 0000 12344444444333321 257 99999999999765
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.014 Score=52.02 Aligned_cols=135 Identities=17% Similarity=0.127 Sum_probs=83.7
Q ss_pred HHhccCCCCccEEEEeecc--cCC-------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccc
Q 045430 4 QAKLSKLTDVTHIFYVTWA--SRP-------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFES 70 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~--~~~-------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~ 70 (309)
....+....+|.+|+.|++ ..+ +|+.++++|+.|+.|...|+. +. +-.++|.+||.+.--.
T Consensus 73 ~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r--~~G~IiN~~SiAG~~~---- 146 (246)
T COG4221 73 EALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER--KSGHIINLGSIAGRYP---- 146 (246)
T ss_pred HHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc--CCceEEEecccccccc----
Confidence 4445567789999999984 222 667789999999999888864 33 2348999999752110
Q ss_pred cCCCCCCCCCCCCCCCCCCcccchHHHHHH--------HHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHH
Q 045430 71 FGKIRPHDTPFTEDLPRLNVTNFYYTQEDI--------LFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVY 142 (309)
Q Consensus 71 ~~~~~~~~~p~~E~~p~~p~p~~~y~~e~~--------~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~ 142 (309)
. |. .+-|.+.|. |+.... ..+ +.++.+-|+.|=.- .++
T Consensus 147 --------y---------~~-~~vY~ATK~aV~~fs~~LR~e~~-g~~---IRVt~I~PG~v~~~----~~s-------- 192 (246)
T COG4221 147 --------Y---------PG-GAVYGATKAAVRAFSLGLRQELA-GTG---IRVTVISPGLVETT----EFS-------- 192 (246)
T ss_pred --------C---------CC-CccchhhHHHHHHHHHHHHHHhc-CCC---eeEEEecCceecce----ecc--------
Confidence 0 01 111444433 333333 246 89999999876332 111
Q ss_pred HHHHhHhCCceeecCCccccc---cceeccCHHHHHHHHHHHhcCCCC
Q 045430 143 AAICKHEGVPLLFPGSKDCWE---GYSVASDADLIAEQHIWAAVDPYA 187 (309)
Q Consensus 143 ~~l~~~~g~~~~~~G~~~~~~---~~~~~~~vd~la~a~i~aa~~~~a 187 (309)
.+++.|+..... .-...+..+|+|+++.++++.|..
T Consensus 193 ---------~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 193 ---------TVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred ---------cccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence 234455443221 123578899999999999988753
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.031 Score=49.97 Aligned_cols=152 Identities=10% Similarity=-0.028 Sum_probs=80.9
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHH----HhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLR----SVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~----a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+++|+|+...+ ++++.+++|+.++.++++ .+.+.+ .-.++|++||...+.
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS~~~~~---------- 150 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSSVHEQI---------- 150 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEccccccC----------
Confidence 34568999999985321 223467999888765554 444432 125899999963321
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
|.....++ ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|..+.....+..-. ....+ . ...
T Consensus 151 ----~~~~~~~Y---~~sKaa~~~~~~~la~e~~~~g---i~v~~v~pg~v~t~~~~~~~~~~~---~~~~~---~-~~~ 213 (261)
T PRK08936 151 ----PWPLFVHY---AASKGGVKLMTETLAMEYAPKG---IRVNNIGPGAINTPINAEKFADPK---QRADV---E-SMI 213 (261)
T ss_pred ----CCCCCccc---HHHHHHHHHHHHHHHHHHhhcC---eEEEEEEECcCCCCccccccCCHH---HHHHH---H-hcC
Confidence 11000010 12344444443333221 247 999999999998774322111100 00011 0 011
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+. .-+...+++++.+++++..+ ...|+.+.+..|.
T Consensus 214 ~~----------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~ 250 (261)
T PRK08936 214 PM----------GYIGKPEEIAAVAAWLASSEASYVTGITLFADGGM 250 (261)
T ss_pred CC----------CCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCc
Confidence 11 12445788999988877643 3457777776553
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.012 Score=54.29 Aligned_cols=145 Identities=11% Similarity=0.013 Sum_probs=80.8
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC---------CCCceEEEEeCCccccCCcccc
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA---------PNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~---------~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
...+|+|||+|+...+ +++..+++|+.|+.++++++...- ..-.++|++||...+...
T Consensus 87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 162 (306)
T PRK07792 87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP---- 162 (306)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----
Confidence 4579999999985321 334578999999999998864210 012489999997554321
Q ss_pred CCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhH
Q 045430 72 GKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH 148 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~ 148 (309)
.. .+. ..+|.+.+.+.+..+.+ ..+ +.+..+.|+. .+.+.. .+..
T Consensus 163 -----~~---------~~~Y~asKaal~~l~~~la~e~~~~g---I~vn~i~Pg~-----~t~~~~---------~~~~- 210 (306)
T PRK07792 163 -----VG---------QANYGAAKAGITALTLSAARALGRYG---VRANAICPRA-----RTAMTA---------DVFG- 210 (306)
T ss_pred -----CC---------CchHHHHHHHHHHHHHHHHHHhhhcC---eEEEEECCCC-----CCchhh---------hhcc-
Confidence 00 011 12344455554443332 246 8888888852 111110 0000
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..+-... .......+++++.++.+++... ...|++|.+.+|.
T Consensus 211 -~~~~~~~-------~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~ 254 (306)
T PRK07792 211 -DAPDVEA-------GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPM 254 (306)
T ss_pred -ccchhhh-------hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCe
Confidence 0000000 1123346889999887777542 3568999997664
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0091 Score=54.20 Aligned_cols=54 Identities=17% Similarity=-0.018 Sum_probs=39.3
Q ss_pred CCCccEEEEeecccC--CChHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccc
Q 045430 10 LTDVTHIFYVTWASR--PTEAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHY 64 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~--~~~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vY 64 (309)
...+|+|||+|++.. .++++.+++|+.|+.++++++... ..+ .++|++||....
T Consensus 74 ~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS~~~~ 130 (275)
T PRK06940 74 LGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIASQSGH 130 (275)
T ss_pred cCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEecccc
Confidence 457999999999542 367789999999999999988653 112 356667776443
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.024 Score=50.64 Aligned_cols=146 Identities=10% Similarity=-0.044 Sum_probs=81.3
Q ss_pred CCCCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.+..+|+|||.|+.... + +++.+++|+.+...+..++.... .+-.+||++||...+..
T Consensus 93 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------- 161 (256)
T PRK12859 93 QLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP----------- 161 (256)
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC-----------
Confidence 34468999999984211 2 34468999999888854442210 02358999999754321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.| ..+. ..+|++.+.+.+..+.+ ..+ +.++.++|+.|-.+. +... ....+ . ..++
T Consensus 162 -~~------~~~~Y~~sK~a~~~l~~~la~~~~~~~---i~v~~v~PG~i~t~~----~~~~----~~~~~---~-~~~~ 219 (256)
T PRK12859 162 -MV------GELAYAATKGAIDALTSSLAAEVAHLG---ITVNAINPGPTDTGW----MTEE----IKQGL---L-PMFP 219 (256)
T ss_pred -CC------CchHHHHHHHHHHHHHHHHHHHhhhhC---eEEEEEEEccccCCC----CCHH----HHHHH---H-hcCC
Confidence 00 0011 13456666665554432 246 999999998875532 1110 00001 0 0111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+ ..+...+|+|+++++.+..+ ...|+.+.+.+|
T Consensus 220 ~----------~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 220 F----------GRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred C----------CCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 1 12345788999988877543 345777776655
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0088 Score=58.28 Aligned_cols=149 Identities=9% Similarity=-0.002 Sum_probs=81.2
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|+...+ +++..+++|+.|+.++++++.... ..-.+||++||...+... ..
T Consensus 282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~---------~~ 352 (450)
T PRK08261 282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN---------RG 352 (450)
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC---------CC
Confidence 3468999999984321 334467999999999999986531 112689999997544211 00
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
. ..+ ..+|.+.+.+++.++.+ ..+ +..+.+.|+.|--+-. ..++.. . ++....+.
T Consensus 353 ~-----~~Y---~asKaal~~~~~~la~el~~~g---i~v~~v~PG~i~t~~~-~~~~~~--------~-~~~~~~~~-- 409 (450)
T PRK08261 353 Q-----TNY---AASKAGVIGLVQALAPLLAERG---ITINAVAPGFIETQMT-AAIPFA--------T-REAGRRMN-- 409 (450)
T ss_pred C-----hHH---HHHHHHHHHHHHHHHHHHhhhC---cEEEEEEeCcCcchhh-hccchh--------H-HHHHhhcC--
Confidence 0 000 12233333344443321 246 8999999987632111 111100 0 00000110
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
......-.+|+++++++.+... ...|++++|.++
T Consensus 410 -------~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~ 445 (450)
T PRK08261 410 -------SLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQ 445 (450)
T ss_pred -------CcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 0011123567999998887542 345899888654
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.004 Score=54.41 Aligned_cols=98 Identities=12% Similarity=-0.026 Sum_probs=61.8
Q ss_pred CccEEEEeeccc--C-----C----ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCc-cccCCccccCCCCCCC
Q 045430 12 DVTHIFYVTWAS--R-----P----TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGK-HYVGPFESFGKIRPHD 78 (309)
Q Consensus 12 ~vd~V~H~A~~~--~-----~----~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~-vYG~~~~~~~~~~~~~ 78 (309)
.+|+|||+|+.. . . +++..+++|+.++.++++++...- ..-.++|++||.. +||.. .
T Consensus 70 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~ 139 (222)
T PRK06953 70 ALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA----------T 139 (222)
T ss_pred CCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc----------c
Confidence 589999999842 1 1 235578999999999999986421 0124688888853 45421 1
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecc
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp 127 (309)
.....+ -..+|.+.+.+++....+..+ ..++.++|+.|.-+
T Consensus 140 --~~~~~~---Y~~sK~a~~~~~~~~~~~~~~---i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 140 --GTTGWL---YRASKAALNDALRAASLQARH---ATCIALHPGWVRTD 180 (222)
T ss_pred --CCCccc---cHHhHHHHHHHHHHHhhhccC---cEEEEECCCeeecC
Confidence 100011 123466677777766554345 88999999987654
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.035 Score=49.70 Aligned_cols=155 Identities=12% Similarity=0.055 Sum_probs=80.3
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+|+|+|+.... ++.+.+++|+.+..+++++ +++. +-.+||++||...+...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~-------- 153 (265)
T PRK07062 84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS--AAASIVCVNSLLALQPE-------- 153 (265)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc--CCcEEEEeccccccCCC--------
Confidence 34568999999984211 2344578887776655554 4443 34699999997554311
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh-HH----HHHHHHHHHh
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV-VG----TLCVYAAICK 147 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~-~~----~~~i~~~l~~ 147 (309)
| .... -.+|.+.+.+.+..+.+ ..+ +.++.++|+.|--+.....+.. .. .-..+..+.+
T Consensus 154 ----~------~~~~y~asKaal~~~~~~la~e~~~~g---i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
T PRK07062 154 ----P------HMVATSAARAGLLNLVKSLATELAPKG---VRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALAR 220 (265)
T ss_pred ----C------CchHhHHHHHHHHHHHHHHHHHhhhcC---eEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhh
Confidence 0 0001 02233333333322221 247 9999999998865432111100 00 0000000000
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
..+.| ..-+...+++|+++.+.+.. ....|+++.|.+|.
T Consensus 221 ~~~~p------------~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~ 261 (265)
T PRK07062 221 KKGIP------------LGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF 261 (265)
T ss_pred cCCCC------------cCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence 01111 11244677899998887753 23568999987663
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0094 Score=53.79 Aligned_cols=99 Identities=14% Similarity=0.027 Sum_probs=59.7
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...++|+|||+|+.... +.+..+++|+.++.++++++... ...-.+||++||...+..
T Consensus 75 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~---------- 144 (272)
T PRK07832 75 AHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA---------- 144 (272)
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC----------
Confidence 34568999999984211 23446899999999999996421 012368999999743321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceeccc
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFS 128 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~ 128 (309)
.| .... ..+|.+.+.+....+.+ ..+ +++++++|+.|.++.
T Consensus 145 --~~------~~~~Y~~sK~a~~~~~~~l~~e~~~~~---i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 145 --LP------WHAAYSASKFGLRGLSEVLRFDLARHG---IGVSVVVPGAVKTPL 188 (272)
T ss_pred --CC------CCcchHHHHHHHHHHHHHHHHHhhhcC---cEEEEEecCcccCcc
Confidence 11 0001 12343333333222211 256 999999999998875
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.013 Score=53.71 Aligned_cols=98 Identities=10% Similarity=-0.029 Sum_probs=60.3
Q ss_pred CCCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
...+|+|+|+|++... ++ ++.+++|+.|+.++++++...- ..-.+||++||...+...
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 150 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA------------ 150 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC------------
Confidence 3568999999985211 22 4468999999999999875420 012589999998666421
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceeccc
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFS 128 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~ 128 (309)
| .... ..+|.+.+.+.+....+ ..+ +.++++.|+.|..+.
T Consensus 151 ~------~~~~Y~asKaal~~~~~~l~~e~~~~g---i~v~~v~Pg~v~T~~ 193 (296)
T PRK05872 151 P------GMAAYCASKAGVEAFANALRLEVAHHG---VTVGSAYLSWIDTDL 193 (296)
T ss_pred C------CchHHHHHHHHHHHHHHHHHHHHHHHC---cEEEEEecCcccchh
Confidence 0 0000 12344444443333221 246 999999999887653
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.017 Score=51.39 Aligned_cols=151 Identities=8% Similarity=-0.060 Sum_probs=85.4
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CC-CceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PN-LRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~-v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...+|++||+|+.... ++++.+++|+.++.++++++...- .+ -.++|++||...+-.
T Consensus 84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------- 152 (253)
T PRK05867 84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII----------- 152 (253)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC-----------
Confidence 3578999999984321 234457899999999999875320 01 146888887643210
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
..|- ....+ ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|-.+-...... ...... ...|+
T Consensus 153 ~~~~-~~~~Y---~asKaal~~~~~~la~e~~~~g---I~vn~i~PG~v~t~~~~~~~~------~~~~~~--~~~~~-- 215 (253)
T PRK05867 153 NVPQ-QVSHY---CASKAAVIHLTKAMAVELAPHK---IRVNSVSPGYILTELVEPYTE------YQPLWE--PKIPL-- 215 (253)
T ss_pred CCCC-Cccch---HHHHHHHHHHHHHHHHHHhHhC---eEEEEeecCCCCCcccccchH------HHHHHH--hcCCC--
Confidence 1010 00000 13455566665555432 247 999999999986543211111 000111 11111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
| -+...+|+|+++++.+... ...|+.+.+..|.
T Consensus 216 -~---------r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 216 -G---------RLGRPEELAGLYLYLASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred -C---------CCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence 1 2346788999988877542 3458999888774
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.021 Score=53.52 Aligned_cols=131 Identities=8% Similarity=-0.073 Sum_probs=75.9
Q ss_pred CCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|++||+|++... + .++.+++|+.|+.++..++. +. +-.+||++||...|...
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~--~~g~iV~isS~~~~~~~---------- 150 (330)
T PRK06139 83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ--GHGIFINMISLGGFAAQ---------- 150 (330)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc--CCCEEEEEcChhhcCCC----------
Confidence 568999999984211 2 23468999999999877753 32 23589999997655321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--c-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--R-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
|. ... ..+|.+...+......+ . .+ +.++.+.|+.|..|...+..+. .+...
T Consensus 151 --p~------~~~Y~asKaal~~~~~sL~~El~~~~g---I~V~~v~Pg~v~T~~~~~~~~~-------------~~~~~ 206 (330)
T PRK06139 151 --PY------AAAYSASKFGLRGFSEALRGELADHPD---IHVCDVYPAFMDTPGFRHGANY-------------TGRRL 206 (330)
T ss_pred --CC------chhHHHHHHHHHHHHHHHHHHhCCCCC---eEEEEEecCCccCccccccccc-------------ccccc
Confidence 10 000 12233322223322221 1 36 9999999999988753221110 01111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY 186 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~ 186 (309)
. ....+...+++|++++.++.++.
T Consensus 207 ~---------~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 207 T---------PPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred c---------CCCCCCCHHHHHHHHHHHHhCCC
Confidence 0 01124578999999999887653
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.046 Score=49.16 Aligned_cols=155 Identities=11% Similarity=0.074 Sum_probs=83.0
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHH----HHHhCcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNV----LRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nl----l~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+++|+|+.... ++++.+++|+.+...+ +..+++. +-.|+|++||...+...
T Consensus 83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~--~~g~Ii~isS~~~~~~~--------- 151 (263)
T PRK08339 83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK--GFGRIIYSTSVAIKEPI--------- 151 (263)
T ss_pred hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEEcCccccCCC---------
Confidence 4568999999984211 3344678997765554 4555443 35789999998654311
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHH------HHHHh
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVY------AAICK 147 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~------~~l~~ 147 (309)
| ..+. -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|-.+- ......-... ....+
T Consensus 152 ---~------~~~~y~asKaal~~l~~~la~el~~~g---IrVn~v~PG~v~T~~----~~~~~~~~~~~~~~~~~~~~~ 215 (263)
T PRK08339 152 ---P------NIALSNVVRISMAGLVRTLAKELGPKG---ITVNGIMPGIIRTDR----VIQLAQDRAKREGKSVEEALQ 215 (263)
T ss_pred ---C------cchhhHHHHHHHHHHHHHHHHHhcccC---eEEEEEEeCcCccHH----HHHHHHhhhhccCCCHHHHHH
Confidence 0 0000 02344444444433332 246 999999999885542 1100000000 00000
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
......|. .-+...+|+|+++++++..+ ...|+.+.+.+|...|
T Consensus 216 ~~~~~~p~----------~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 216 EYAKPIPL----------GRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred HHhccCCc----------ccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 00011111 12456788999998887543 3468999887776544
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.039 Score=49.37 Aligned_cols=149 Identities=9% Similarity=-0.027 Sum_probs=80.6
Q ss_pred CCCccEEEEeecccC--------C----C---hHHHHHhHHHHHHHH----HHHhCcCCCCCceEEEEeCCccccCCccc
Q 045430 10 LTDVTHIFYVTWASR--------P----T---EAENCEVNGAMLRNV----LRSVIPNAPNLRHVCLQTGGKHYVGPFES 70 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~--------~----~---~~~~~~vNv~gt~nl----l~a~~~~~~~v~r~v~~Ss~~vYG~~~~~ 70 (309)
...+|+++|+|+... + + ....+++|+.+...+ +..+++. +-.+||++||...+-.
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~---- 158 (260)
T PRK08416 85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV--GGGSIISLSSTGNLVY---- 158 (260)
T ss_pred cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc--CCEEEEEEeccccccC----
Confidence 456899999997421 1 1 223567787765554 4444443 3468999999643211
Q ss_pred cCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh
Q 045430 71 FGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK 147 (309)
Q Consensus 71 ~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~ 147 (309)
.| .. +. ..+|.+.+.+++..+.+ ..+ +.++.|.|+.|--+-......... ......
T Consensus 159 --------~~---~~---~~Y~asK~a~~~~~~~la~el~~~g---i~v~~v~PG~i~T~~~~~~~~~~~---~~~~~~- 217 (260)
T PRK08416 159 --------IE---NY---AGHGTSKAAVETMVKYAATELGEKN---IRVNAVSGGPIDTDALKAFTNYEE---VKAKTE- 217 (260)
T ss_pred --------CC---Cc---ccchhhHHHHHHHHHHHHHHhhhhC---eEEEEEeeCcccChhhhhccCCHH---HHHHHH-
Confidence 00 00 11 14566666666555543 146 999999998774331111100000 000000
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...| . .-+...+|+++++++++..+ ...|+.+.+.+|.
T Consensus 218 -~~~~--~----------~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~ 257 (260)
T PRK08416 218 -ELSP--L----------NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT 257 (260)
T ss_pred -hcCC--C----------CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence 0111 1 12456888999988887643 3568998887663
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.011 Score=54.33 Aligned_cols=96 Identities=8% Similarity=-0.032 Sum_probs=58.5
Q ss_pred CCCCccEEEEeecccCC--------Ch---HHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCC
Q 045430 9 KLTDVTHIFYVTWASRP--------TE---AENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~--------~~---~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
...++|+|||+|+.... ++ +..+++|+.|+.++++++. +. +..++|++||..+++..
T Consensus 114 ~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS~~~~~~~------ 185 (293)
T PRK05866 114 RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER--GDGHIINVATWGVLSEA------ 185 (293)
T ss_pred HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcEEEEECChhhcCCC------
Confidence 34578999999985321 11 3367899999888877754 33 45799999997655421
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceec
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFG 126 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyG 126 (309)
.| .... ..+|++.+.+++....+ ..+ +.++.++|+.|=.
T Consensus 186 -----~p------~~~~Y~asKaal~~l~~~la~e~~~~g---I~v~~v~pg~v~T 227 (293)
T PRK05866 186 -----SP------LFSVYNASKAALSAVSRVIETEWGDRG---VHSTTLYYPLVAT 227 (293)
T ss_pred -----CC------CcchHHHHHHHHHHHHHHHHHHhcccC---cEEEEEEcCcccC
Confidence 11 0011 12344544444443321 246 9999999987643
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.038 Score=49.37 Aligned_cols=149 Identities=9% Similarity=-0.030 Sum_probs=83.9
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...+|+|||+|+.... ++.+.+++|+.++.++++++... ...-.++|++||...+-
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------ 162 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------ 162 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------
Confidence 3468999999984311 23446789999999988886532 11124788877753221
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. ......+ -.+|.+.+.+++..+.+ ..+ +.++.++|+.++.|........ ..+..+. ...++
T Consensus 163 ~--~~~~~~Y---~~sKaal~~~~~~la~e~~~~g---I~v~~i~Pg~~~t~~~~~~~~~----~~~~~~~--~~~~~-- 226 (262)
T PRK07831 163 A--QHGQAHY---AAAKAGVMALTRCSALEAAEYG---VRINAVAPSIAMHPFLAKVTSA----ELLDELA--AREAF-- 226 (262)
T ss_pred C--CCCCcch---HHHHHHHHHHHHHHHHHhCccC---eEEEEEeeCCccCcccccccCH----HHHHHHH--hcCCC--
Confidence 1 1000000 13456666666555542 246 9999999999988743211110 0111111 11221
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSN 196 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~ 196 (309)
+ -+...+|+++++++.+... ...|+.+.|..
T Consensus 227 -~---------r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 227 -G---------RAAEPWEVANVIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred -C---------CCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence 1 1335678999998877643 34588777665
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0094 Score=52.69 Aligned_cols=96 Identities=6% Similarity=-0.102 Sum_probs=58.3
Q ss_pred CccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 12 ~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.+|.|+|+|+.... +. .+.+++|+.++.++++++... ..+.++||++||..... ..|
T Consensus 76 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~ 143 (243)
T PRK07102 76 LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR------------GRA 143 (243)
T ss_pred cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC------------CCC
Confidence 46999999974211 22 346799999999999887542 01357899999863221 100
Q ss_pred CCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 81 FTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 81 ~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
...+. ..+|.+.+.+.+....+ ..+ +.+++++|+.|+++
T Consensus 144 --~~~~Y---~~sK~a~~~~~~~l~~el~~~g---i~v~~v~pg~v~t~ 184 (243)
T PRK07102 144 --SNYVY---GSAKAALTAFLSGLRNRLFKSG---VHVLTVKPGFVRTP 184 (243)
T ss_pred --CCccc---HHHHHHHHHHHHHHHHHhhccC---cEEEEEecCcccCh
Confidence 00000 12344444444443321 246 99999999999885
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0064 Score=60.57 Aligned_cols=96 Identities=7% Similarity=-0.151 Sum_probs=59.5
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCc----CCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIP----NAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~----~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...+|+|||+|++... +.+..+++|+.|+.++++++.. .+ .-.|||++||.+.|+..
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~--------- 459 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG-TGGHIVNVASAAAYAPS--------- 459 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEECChhhccCC---------
Confidence 3468999999985321 2234678999999998887532 21 12589999999888632
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceec
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFG 126 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyG 126 (309)
... .++ ..+|.+.+.+....+.+ ..+ +.++.++|+.|-.
T Consensus 460 ~~~-----~~Y---~~sKaa~~~~~~~l~~e~~~~g---i~v~~v~Pg~v~t 500 (582)
T PRK05855 460 RSL-----PAY---ATSKAAVLMLSECLRAELAAAG---IGVTAICPGFVDT 500 (582)
T ss_pred CCC-----cHH---HHHHHHHHHHHHHHHHHhcccC---cEEEEEEeCCCcc
Confidence 000 000 12344444444333321 246 9999999998844
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0068 Score=54.34 Aligned_cols=97 Identities=7% Similarity=-0.033 Sum_probs=61.1
Q ss_pred CCCCccEEEEeecccCC------------------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCc
Q 045430 9 KLTDVTHIFYVTWASRP------------------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPF 68 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------------------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~ 68 (309)
....+|+|+|+|+...+ ++++.+++|+.++.++++++...- .+-.+||++||...+...
T Consensus 74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~- 152 (266)
T PRK06171 74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS- 152 (266)
T ss_pred HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-
Confidence 34578999999984211 224467999999999999886431 123579999998655321
Q ss_pred cccCCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCcee
Q 045430 69 ESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIF 125 (309)
Q Consensus 69 ~~~~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~Vy 125 (309)
... .++ ..+|.+.+.+++..+.+ ..+ +.+++++|+.|-
T Consensus 153 --------~~~-----~~Y---~~sK~a~~~l~~~la~e~~~~g---i~v~~v~pG~~~ 192 (266)
T PRK06171 153 --------EGQ-----SCY---AATKAALNSFTRSWAKELGKHN---IRVVGVAPGILE 192 (266)
T ss_pred --------CCC-----chh---HHHHHHHHHHHHHHHHHhhhcC---eEEEEEeccccc
Confidence 000 000 13455556555554432 246 999999999874
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.006 Score=62.18 Aligned_cols=96 Identities=8% Similarity=-0.043 Sum_probs=61.3
Q ss_pred CCCCccEEEEeecccCC-----------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCC
Q 045430 9 KLTDVTHIFYVTWASRP-----------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~-----------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
...++|+|+|+|+.... +.+..+++|+.|+.+++.++ ++. +..+||++||..+|+..
T Consensus 445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~isS~~~~~~~------ 516 (657)
T PRK07201 445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER--RFGHVVNVSSIGVQTNA------ 516 (657)
T ss_pred hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCCEEEEECChhhcCCC------
Confidence 34568999999984211 22446799999988887665 333 46799999999877631
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
.. .+. ..+|.+.+.++..++.+ ..+ +.+++++|+.|..+
T Consensus 517 ---~~---------~~~Y~~sK~a~~~~~~~la~e~~~~~---i~v~~v~pg~v~T~ 558 (657)
T PRK07201 517 ---PR---------FSAYVASKAALDAFSDVAASETLSDG---ITFTTIHMPLVRTP 558 (657)
T ss_pred ---CC---------cchHHHHHHHHHHHHHHHHHHHHhhC---CcEEEEECCcCccc
Confidence 01 011 12344444444433321 246 99999999998765
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.015 Score=52.14 Aligned_cols=50 Identities=8% Similarity=-0.019 Sum_probs=35.9
Q ss_pred CCccEEEEeecccCC------ChH---HHHHhHHHHHHH----HHHHhCcCCCCCceEEEEeCCc
Q 045430 11 TDVTHIFYVTWASRP------TEA---ENCEVNGAMLRN----VLRSVIPNAPNLRHVCLQTGGK 62 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~~~---~~~~vNv~gt~n----ll~a~~~~~~~v~r~v~~Ss~~ 62 (309)
.++|+++|+|+...+ ++. +.+++|+.++.+ +++++++. +..+||++||..
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~--~~~~iv~isS~~ 148 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ--GFGQIIAMSSVA 148 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc--CCceEEEEechh
Confidence 479999999885322 111 347999988766 56677665 468999999974
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.009 Score=49.13 Aligned_cols=52 Identities=10% Similarity=-0.134 Sum_probs=39.8
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCcc
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKH 63 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~v 63 (309)
...+|+|+|+|+.... +++..+++|+.++.++++++.+. +.+++|++||...
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ii~~ss~~~ 139 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--PLDFFVLFSSVAG 139 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC--CcceEEEEccHHH
Confidence 3568999999984211 33556899999999999999765 5789999988643
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.013 Score=51.86 Aligned_cols=96 Identities=9% Similarity=-0.058 Sum_probs=57.7
Q ss_pred CCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..+|++||+|+... + ++++.+++|+.|+.++++++.+.. .+.++||++||...+... .
T Consensus 76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~ 145 (243)
T PRK07023 76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY----------A 145 (243)
T ss_pred CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC----------C
Confidence 46899999998421 1 224567999999666555543221 135799999998766421 0
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHh-cCCCcceeEEeecCCceec
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEK-RKGPLSLTWSVHRPHIIFG 126 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~-~~~~~~~~~~ilRP~~VyG 126 (309)
+ ...+ ..+|...|.+++.++.+ ..+ +.+.+++|+.+=.
T Consensus 146 -~---~~~Y---~~sK~a~~~~~~~~~~~~~~~---i~v~~v~pg~~~t 184 (243)
T PRK07023 146 -G---WSVY---CATKAALDHHARAVALDANRA---LRIVSLAPGVVDT 184 (243)
T ss_pred -C---chHH---HHHHHHHHHHHHHHHhcCCCC---cEEEEecCCcccc
Confidence 0 0000 13345556666555542 245 9999999987733
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.029 Score=51.23 Aligned_cols=156 Identities=12% Similarity=0.099 Sum_probs=84.8
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC----C----CCCceEEEEeCCccccCCcccc
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN----A----PNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~----~----~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
....+|++||+|++... +++..+++|+.|+.++++++... . +.-.+||++||...+...
T Consensus 89 ~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---- 164 (286)
T PRK07791 89 TFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS---- 164 (286)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC----
Confidence 44678999999985321 33557899999998888776421 0 012489999986543211
Q ss_pred CCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 72 GKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
| ....+ -.+|.+.+.+.+..+.+ ..+ +.+..|.|+ + .+.+... .+..+.+
T Consensus 165 --------~--~~~~Y---~asKaal~~l~~~la~el~~~g---IrVn~v~Pg-~----~T~~~~~-----~~~~~~~-- 216 (286)
T PRK07791 165 --------V--GQGNY---SAAKAGIAALTLVAAAELGRYG---VTVNAIAPA-A----RTRMTET-----VFAEMMA-- 216 (286)
T ss_pred --------C--Cchhh---HHHHHHHHHHHHHHHHHHHHhC---eEEEEECCC-C----CCCcchh-----hHHHHHh--
Confidence 0 00000 12344444443333321 247 999999996 3 2222111 0111100
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHHHHH
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKHLWK 207 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~el~~ 207 (309)
.+ + .+. ......+|+++++++.+... ...|+.+.+.+|...-+ +-|+
T Consensus 217 -~~-~---~~~-----~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~-~~~~ 265 (286)
T PRK07791 217 -KP-E---EGE-----FDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKISVA-EGWR 265 (286)
T ss_pred -cC-c---ccc-----cCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceEEe-chhh
Confidence 11 1 110 12456899999999887642 35688888876655422 4444
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0054 Score=57.33 Aligned_cols=56 Identities=11% Similarity=0.143 Sum_probs=47.0
Q ss_pred cCCCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCcccc
Q 045430 8 SKLTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYV 65 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG 65 (309)
++++|+|+|+|+|+... .+..+....|+.++++++++++++ +++|+|+++|--+-+
T Consensus 72 ~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~--~~~~iviv~SNPvdv 130 (321)
T PTZ00325 72 KALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS--APKAIVGIVSNPVNS 130 (321)
T ss_pred HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEecCcHHH
Confidence 56778999999999532 266889999999999999999998 689999999964443
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.025 Score=50.46 Aligned_cols=159 Identities=10% Similarity=0.026 Sum_probs=84.2
Q ss_pred HHhccCCCCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccC
Q 045430 4 QAKLSKLTDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
++.++.+..+|++||+|+.... + ++..+++|+.+..++++++...- .+-.++|++||....
T Consensus 73 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-------- 144 (259)
T PRK06125 73 EQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-------- 144 (259)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc--------
Confidence 3444455679999999984221 2 24457899999988888763210 022579999886221
Q ss_pred CCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 73 KIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
.|... . .. -.+|.+.+.+.+..+.+ ..+ +.++.+.|+.|-.+.....+ .. .
T Consensus 145 ------~~~~~-~---~~y~ask~al~~~~~~la~e~~~~g---i~v~~i~PG~v~t~~~~~~~---------~~----~ 198 (259)
T PRK06125 145 ------NPDAD-Y---ICGSAGNAALMAFTRALGGKSLDDG---VRVVGVNPGPVATDRMLTLL---------KG----R 198 (259)
T ss_pred ------CCCCC-c---hHhHHHHHHHHHHHHHHHHHhCccC---eEEEEEecCccccHHHHHHH---------Hh----h
Confidence 11000 0 00 01233444444443321 246 99999999877654211000 00 0
Q ss_pred CCceeecCCcccc------ccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCW------EGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~------~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+.. ..++...| ....-+..++|+|+++++++..+ ...|+.+.+.+|.
T Consensus 199 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~ 253 (259)
T PRK06125 199 ARA--ELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGI 253 (259)
T ss_pred hhc--ccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCe
Confidence 000 00111000 00112457889999988887643 3458888887764
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.027 Score=52.21 Aligned_cols=108 Identities=9% Similarity=-0.039 Sum_probs=61.4
Q ss_pred CCCCccEEEEeecccCC--------ChHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP--------TEAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
....+|++||.|+.... ..+..+.+|+.|...+.+.+... ..+-.|+|++||...+... . ...
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~---~-----~~~ 161 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGA---I-----NWD 161 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCC---c-----Ccc
Confidence 34568999999984211 33456899999977666665421 0023589999998665321 0 112
Q ss_pred CCCCCCCCCCcc---cchHHHHHHHHHHHHh----cCCCcceeEEeecCCceecc
Q 045430 80 PFTEDLPRLNVT---NFYYTQEDILFEEVEK----RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 80 p~~E~~p~~p~p---~~~y~~e~~~~~~~~~----~~~~~~~~~~ilRP~~VyGp 127 (309)
+++++.+..+.. .+|.+.+.+..+++.+ ..+ +.++.+.|+.|-..
T Consensus 162 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~g---I~v~~v~PG~v~T~ 213 (313)
T PRK05854 162 DLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWG---ITSNLAHPGVAPTN 213 (313)
T ss_pred cccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCC---eEEEEEecceeccC
Confidence 344444332221 2333344444444321 135 89999999988543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.04 Score=51.11 Aligned_cols=56 Identities=5% Similarity=-0.136 Sum_probs=37.7
Q ss_pred CCCccEEEEeecccCC-------Ch---HHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCcccc
Q 045430 10 LTDVTHIFYVTWASRP-------TE---AENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYV 65 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~-------~~---~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG 65 (309)
..++|++||+|++..+ ++ +..+++|+.|+..++.++ ++...+-.|||++||...+.
T Consensus 79 ~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 79 GRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT 148 (314)
T ss_pred CCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence 3468999999984211 22 335799999977775554 33311236999999998875
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.031 Score=52.15 Aligned_cols=53 Identities=19% Similarity=0.093 Sum_probs=37.1
Q ss_pred CccEEEEeecccC----C----Ch---HHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccc
Q 045430 12 DVTHIFYVTWASR----P----TE---AENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHY 64 (309)
Q Consensus 12 ~vd~V~H~A~~~~----~----~~---~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vY 64 (309)
++|++||+|+... . ++ ++.+++|+.|+.++++++... ..+-.++|++||...+
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~ 197 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAI 197 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 5779999998531 1 22 336799999999988886421 0034689999998665
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.017 Score=50.52 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=57.6
Q ss_pred CccEEEEeecccCC-----------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP-----------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
++|+|||+|+...+ +....+.+|+.++.++++++.... .+-.+++++||. +|.. ..
T Consensus 71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~----------~~ 138 (225)
T PRK08177 71 RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSV----------EL 138 (225)
T ss_pred CCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--cccc----------cc
Confidence 69999999984211 223356889999999988875431 122467777764 5431 11
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
+..+..+ . -.+|.+.+.+++.++.+ ..+ +.++.++|+.|=.+
T Consensus 139 ~~~~~~~---~Y~~sK~a~~~~~~~l~~e~~~~~---i~v~~i~PG~i~t~ 183 (225)
T PRK08177 139 PDGGEMP---LYKASKAALNSMTRSFVAELGEPT---LTVLSMHPGWVKTD 183 (225)
T ss_pred CCCCCcc---chHHHHHHHHHHHHHHHHHhhcCC---eEEEEEcCCceecC
Confidence 1111111 1 13355566666555432 245 89999999987443
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.021 Score=51.15 Aligned_cols=155 Identities=12% Similarity=0.039 Sum_probs=86.7
Q ss_pred cCCCCccEEEEeeccc---CC-----------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCcccc
Q 045430 8 SKLTDVTHIFYVTWAS---RP-----------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~---~~-----------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
+.+..+|++||+|+.. .+ ++++.+++|+.++.++++++... ..+ .++|++||...+-..
T Consensus 75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~---- 149 (262)
T TIGR03325 75 AAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPN---- 149 (262)
T ss_pred HHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCC----
Confidence 3446789999999842 11 13457899999999999998653 112 478888886444210
Q ss_pred CCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc-chhHH----HHHHHHHH
Q 045430 72 GKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM-MNVVG----TLCVYAAI 145 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~----~~~i~~~l 145 (309)
... +. ..+|.+.+.+++..+.+ .++. ..+..+.|+.|..+-.... ..... .......+
T Consensus 150 -----~~~---------~~Y~~sKaa~~~l~~~la~e-~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~ 213 (262)
T TIGR03325 150 -----GGG---------PLYTAAKHAVVGLVKELAFE-LAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDML 213 (262)
T ss_pred -----CCC---------chhHHHHHHHHHHHHHHHHh-hccC-eEEEEEecCCCcCCCccccccccccccccccchhhhh
Confidence 000 11 13566677777776664 2211 8899999998875421110 00000 00000000
Q ss_pred HhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC---CCCCcceeecCC
Q 045430 146 CKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP---YARNEAFNCSNG 197 (309)
Q Consensus 146 ~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~~g 197 (309)
+ ..+|. .-+...+++|+++++++..+ ...|+++.+.+|
T Consensus 214 -~---~~~p~----------~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 214 -K---SVLPI----------GRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred -h---hcCCC----------CCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence 0 01111 12445778999888776542 246888888765
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.27 Score=44.55 Aligned_cols=153 Identities=10% Similarity=-0.031 Sum_probs=85.2
Q ss_pred CCCCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+++|+|++.. + +++..+++|+.++.++++++...-.+=.++|++||.....
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~---------- 154 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK---------- 154 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc----------
Confidence 3456899999998531 1 2344679999999999988764311125899998853221
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
..| .... -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+-.... .. +..+.......
T Consensus 155 --~~p------~~~~Y~asKaal~~l~~~la~el~~~g---IrVn~v~PG~v~T~~~~~~-~~------~~~~~~~~~~~ 216 (272)
T PRK08159 155 --VMP------HYNVMGVAKAALEASVKYLAVDLGPKN---IRVNAISAGPIKTLAASGI-GD------FRYILKWNEYN 216 (272)
T ss_pred --CCC------cchhhhhHHHHHHHHHHHHHHHhcccC---eEEEEeecCCcCCHHHhcC-Cc------chHHHHHHHhC
Confidence 111 0001 13455555444444332 246 9999999998865311000 00 00000000001
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.++ .-+...+|+|+++++.+..+ ...|+.+.+..|..
T Consensus 217 ~p~----------~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~ 255 (272)
T PRK08159 217 APL----------RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYH 255 (272)
T ss_pred Ccc----------cccCCHHHHHHHHHHHhCccccCccceEEEECCCce
Confidence 111 12356788999998888643 34688888887743
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.022 Score=50.94 Aligned_cols=155 Identities=7% Similarity=-0.077 Sum_probs=87.7
Q ss_pred cCCCCccEEEEeecccC---C----C-------hHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccC
Q 045430 8 SKLTDVTHIFYVTWASR---P----T-------EAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~---~----~-------~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
+....+|++||+|++.. + + +++.+++|+.++.++++++...- ..-.++|++||...|...
T Consensus 76 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----- 150 (263)
T PRK06200 76 DAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG----- 150 (263)
T ss_pred HhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----
Confidence 34557899999998421 1 2 33457899999999888876420 011479999998766421
Q ss_pred CCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCC-cch----hHHH-HHHHHH
Q 045430 73 KIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYS-MMN----VVGT-LCVYAA 144 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~-~~~----~~~~-~~i~~~ 144 (309)
... +. ..+|.+.+.+++..+.+. .+ +.+..+.|+.|.-+-... .+. .... -.....
T Consensus 151 ----~~~---------~~Y~~sK~a~~~~~~~la~el~~~---Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~ 214 (263)
T PRK06200 151 ----GGG---------PLYTASKHAVVGLVRQLAYELAPK---IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADM 214 (263)
T ss_pred ----CCC---------chhHHHHHHHHHHHHHHHHHHhcC---cEEEEEeCCccccCCcCccccCCCCcccccccchhHH
Confidence 010 11 134666666666665531 24 899999999885542110 000 0000 000000
Q ss_pred HHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC---CCCCcceeecCC
Q 045430 145 ICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP---YARNEAFNCSNG 197 (309)
Q Consensus 145 l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~~g 197 (309)
+ .... ...-+...+|+++++++++..+ ...|+++.+.+|
T Consensus 215 ~----~~~~----------p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 215 I----AAIT----------PLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred h----hcCC----------CCCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence 0 0001 1123456788999988877643 246899988766
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.072 Score=51.15 Aligned_cols=29 Identities=14% Similarity=0.107 Sum_probs=25.6
Q ss_pred HHhHHHHHHHHHHHhCcCCCCCceEEEEeCC
Q 045430 31 CEVNGAMLRNVLRSVIPNAPNLRHVCLQTGG 61 (309)
Q Consensus 31 ~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~ 61 (309)
..|--.|+.|+++||+.+ +|+|||++||+
T Consensus 174 ~~VD~~g~knlvdA~~~a--Gvk~~vlv~si 202 (411)
T KOG1203|consen 174 EKVDYEGTKNLVDACKKA--GVKRVVLVGSI 202 (411)
T ss_pred ceecHHHHHHHHHHHHHh--CCceEEEEEee
Confidence 468889999999999887 89999999775
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.16 Score=45.50 Aligned_cols=153 Identities=10% Similarity=-0.020 Sum_probs=82.8
Q ss_pred CCCCccEEEEeeccc------CC-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWAS------RP-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~------~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+++|+|+.. .+ ++++.+++|+.++.++++++...-..=.+||++||.....
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~---------- 153 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR---------- 153 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc----------
Confidence 345689999999842 11 2244679999999988888654210115899999863221
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
..| ....+ -.+|.+.+.+.+..+.+ ..+ +.++.+.|+.|--+-.......-. ....+. ...|+
T Consensus 154 --~~~--~~~~Y---~asKaal~~l~~~la~el~~~g---I~Vn~i~PG~v~T~~~~~~~~~~~---~~~~~~--~~~p~ 218 (258)
T PRK07370 154 --AIP--NYNVM---GVAKAALEASVRYLAAELGPKN---IRVNAISAGPIRTLASSAVGGILD---MIHHVE--EKAPL 218 (258)
T ss_pred --CCc--ccchh---hHHHHHHHHHHHHHHHHhCcCC---eEEEEEecCcccCchhhccccchh---hhhhhh--hcCCc
Confidence 110 00000 13355555554444432 246 999999999885542111000000 000110 01111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.-+...+|+++++.+.+..+ ...|+++.|..|.
T Consensus 219 ------------~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~ 253 (258)
T PRK07370 219 ------------RRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGY 253 (258)
T ss_pred ------------CcCCCHHHHHHHHHHHhChhhccccCcEEEECCcc
Confidence 12345688999988877643 3458888886653
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.3 Score=43.50 Aligned_cols=152 Identities=9% Similarity=-0.041 Sum_probs=83.6
Q ss_pred CCCCccEEEEeecccC------C----C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASR------P----T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~------~----~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+++|+|+... + + ++..+++|+.+...++.++...-..-.++|++||.....
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~---------- 149 (252)
T PRK06079 80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER---------- 149 (252)
T ss_pred HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc----------
Confidence 3456899999998421 1 2 244578999998888877654311125899998863221
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
..| ....+ ..+|.+.+.+.+..+.+ ..+ +.++.|.|+.|-.+-.......- ..+..+. . ..
T Consensus 150 --~~~--~~~~Y---~asKaal~~l~~~la~el~~~g---I~vn~i~PG~v~T~~~~~~~~~~---~~~~~~~--~--~~ 212 (252)
T PRK06079 150 --AIP--NYNVM---GIAKAALESSVRYLARDLGKKG---IRVNAISAGAVKTLAVTGIKGHK---DLLKESD--S--RT 212 (252)
T ss_pred --cCC--cchhh---HHHHHHHHHHHHHHHHHhhhcC---cEEEEEecCcccccccccCCChH---HHHHHHH--h--cC
Confidence 111 00000 13455555555444432 246 99999999988654211111000 0111111 1 11
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
|. .-+...+|+|+++++.+..+ ...|++..+..|
T Consensus 213 p~----------~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 213 VD----------GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred cc----------cCCCCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence 11 12455788999988887642 345888887665
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.046 Score=48.90 Aligned_cols=53 Identities=9% Similarity=-0.021 Sum_probs=37.1
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCc
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGK 62 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~ 62 (309)
...+|+|||+|+.... +.++.+++|+.|+.++++++... ..+..++|++||..
T Consensus 78 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~ 141 (263)
T PRK09072 78 MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTF 141 (263)
T ss_pred cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChh
Confidence 4578999999984221 22446789999999999987532 11246788888853
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.053 Score=47.94 Aligned_cols=145 Identities=7% Similarity=-0.051 Sum_probs=74.9
Q ss_pred EEEEeecccCC-------C---hHHHHHhHHHHHHHH----HHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 15 HIFYVTWASRP-------T---EAENCEVNGAMLRNV----LRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 15 ~V~H~A~~~~~-------~---~~~~~~vNv~gt~nl----l~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
+++|+|+...+ + ..+.+++|+.+...+ +..+++.+ +-++||++||..++... |
T Consensus 83 ~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~------------~ 149 (251)
T PRK06924 83 HLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWK-VDKRVINISSGAAKNPY------------F 149 (251)
T ss_pred EEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccC-CCceEEEecchhhcCCC------------C
Confidence 88999874211 2 234578899885544 44444422 34689999997543210 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh----cCCCcceeEEeecCCceecccCCCcchhHHH--HHHHHHHHhHhCCce
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGT--LCVYAAICKHEGVPL 153 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~--~~i~~~l~~~~g~~~ 153 (309)
.... ..+|.+.+.+++.++.+ ..+ +.+..|+|+.|-.+.. ..... ...+..+..... .
T Consensus 150 ------~~~~Y~~sKaa~~~~~~~la~e~~~~~~~---i~v~~v~Pg~v~t~~~----~~~~~~~~~~~~~~~~~~~--~ 214 (251)
T PRK06924 150 ------GWSAYCSSKAGLDMFTQTVATEQEEEEYP---VKIVAFSPGVMDTNMQ----AQIRSSSKEDFTNLDRFIT--L 214 (251)
T ss_pred ------CcHHHhHHHHHHHHHHHHHHHHhhhcCCC---eEEEEecCCccccHhH----HHHHhcCcccchHHHHHHH--H
Confidence 0001 13455566665544432 246 8899999987754321 10000 000000000000 0
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcC-CCCCCcceeecC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVD-PYARNEAFNCSN 196 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~-~~a~g~~fNI~~ 196 (309)
. .. .-+..++|+|+.++.++.. +...|+.+.|.+
T Consensus 215 -~-~~-------~~~~~~~dva~~~~~l~~~~~~~~G~~~~v~~ 249 (251)
T PRK06924 215 -K-EE-------GKLLSPEYVAKALRNLLETEDFPNGEVIDIDE 249 (251)
T ss_pred -h-hc-------CCcCCHHHHHHHHHHHHhcccCCCCCEeehhh
Confidence 0 01 1246789999999888875 334577766653
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.27 Score=43.93 Aligned_cols=151 Identities=11% Similarity=-0.011 Sum_probs=81.2
Q ss_pred CCCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...+|+++|+|+... + ++++.+++|+.++.++++++...-..=.++|++||....
T Consensus 86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~------------ 153 (258)
T PRK07533 86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE------------ 153 (258)
T ss_pred cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc------------
Confidence 356899999998431 1 234567999999999988765431111478998885221
Q ss_pred CCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.+......+ ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|-.+-.......-. ...... ...|+
T Consensus 154 --~~~~~~~~Y---~asKaal~~l~~~la~el~~~g---I~Vn~v~PG~v~T~~~~~~~~~~~---~~~~~~--~~~p~- 219 (258)
T PRK07533 154 --KVVENYNLM---GPVKAALESSVRYLAAELGPKG---IRVHAISPGPLKTRAASGIDDFDA---LLEDAA--ERAPL- 219 (258)
T ss_pred --cCCccchhh---HHHHHHHHHHHHHHHHHhhhcC---cEEEEEecCCcCChhhhccCCcHH---HHHHHH--hcCCc-
Confidence 111000000 12344444443333321 246 899999999885542111100000 000110 11121
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
..+...+|+++++++++..+ ...|+.+.+..|
T Consensus 220 -----------~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 220 -----------RRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred -----------CCCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence 12346788999998888642 356888887655
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.53 Score=42.56 Aligned_cols=152 Identities=9% Similarity=-0.008 Sum_probs=82.6
Q ss_pred CCCCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccccCCccccCCC
Q 045430 9 KLTDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
....+|+++|+|++.. + +++..+++|+.++.+++.++... ..+ .++|++||.+...
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~-G~Iv~isS~~~~~--------- 151 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG-GSMLTLTYGGSTR--------- 151 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC-ceEEEEcCCCccc---------
Confidence 3457899999998431 1 22345689999998888776432 112 5799998864321
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
..| ...++ -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|-.+-....... -.....+.+ ..|
T Consensus 152 ---~~~--~~~~Y---~asKaAl~~l~r~la~el~~~g---IrVn~v~PG~i~T~~~~~~~~~---~~~~~~~~~--~~p 215 (271)
T PRK06505 152 ---VMP--NYNVM---GVAKAALEASVRYLAADYGPQG---IRVNAISAGPVRTLAGAGIGDA---RAIFSYQQR--NSP 215 (271)
T ss_pred ---cCC--ccchh---hhhHHHHHHHHHHHHHHHhhcC---eEEEEEecCCccccccccCcch---HHHHHHHhh--cCC
Confidence 111 00000 12344444444333332 246 9999999998866421111000 001111111 112
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+ | -+...+|+|+++++.+..+ ...|+...+..|.
T Consensus 216 ~---~---------r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 216 L---R---------RTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred c---c---------ccCCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence 1 1 1235788999988887643 2458888887764
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.015 Score=49.57 Aligned_cols=54 Identities=13% Similarity=-0.009 Sum_probs=36.3
Q ss_pred CCccEEEEeecccCC------ChHH---HHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCcc-ccC
Q 045430 11 TDVTHIFYVTWASRP------TEAE---NCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKH-YVG 66 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~~~~---~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~v-YG~ 66 (309)
..++.|||+|+...+ ++++ .+..-+.|+.||.++.... .+++||+.||.+. +|.
T Consensus 80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--~l~~~i~~SSis~~~G~ 143 (181)
T PF08659_consen 80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--PLDFFILFSSISSLLGG 143 (181)
T ss_dssp S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--TTSEEEEEEEHHHHTT-
T ss_pred CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--CCCeEEEECChhHhccC
Confidence 478999999984211 4444 4688899999999999875 6899999999764 564
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.027 Score=52.67 Aligned_cols=51 Identities=10% Similarity=0.137 Sum_probs=43.5
Q ss_pred cCCCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeC
Q 045430 8 SKLTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss 60 (309)
++++++|+|+|+|+... .+..+....|+..++++++++.+++ .+++|+++|
T Consensus 82 ~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~--p~aivivvS 135 (323)
T PLN00106 82 DALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC--PNALVNIIS 135 (323)
T ss_pred HHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEeC
Confidence 35678899999999532 3778899999999999999999984 688999988
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.15 Score=47.04 Aligned_cols=55 Identities=4% Similarity=-0.217 Sum_probs=36.4
Q ss_pred CCCccEEEEeeccc-C--C-------ChHHHHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccc
Q 045430 10 LTDVTHIFYVTWAS-R--P-------TEAENCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHY 64 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-~--~-------~~~~~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vY 64 (309)
..++|++||+|++. . + +.+..+++|+.|+.+++.+ +++...+-.|||++||...+
T Consensus 73 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 73 GRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred CCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 35789999999852 1 1 2234679999997777555 43321003699999998654
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.41 Score=41.46 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=87.9
Q ss_pred HHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC----CCCCceEEEEeCCccccCCcc
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN----APNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~----~~~v~r~v~~Ss~~vYG~~~~ 69 (309)
+++.++....+++++.||++..+ +|++.+.+|..|+..+-+|+.+. +-+--++|-+||+ .|-.
T Consensus 81 l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSI--VGki-- 156 (256)
T KOG1200|consen 81 LEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSI--VGKI-- 156 (256)
T ss_pred HHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhh--hccc--
Confidence 45666777789999999997544 78889999999988877765433 1011279999985 2211
Q ss_pred ccCCCCCCCCCCCCCCCCCCcccchHHHH--------H-HHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHH
Q 045430 70 SFGKIRPHDTPFTEDLPRLNVTNFYYTQE--------D-ILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLC 140 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~p~~~y~~e--------~-~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~ 140 (309)
+.+ ..+.|++. + ..+|.+. .+ +.+.++-|+.|=-| |....+--
T Consensus 157 --GN~----------------GQtnYAAsK~GvIgftktaArEla~--kn---IrvN~VlPGFI~tp-----MT~~mp~~ 208 (256)
T KOG1200|consen 157 --GNF----------------GQTNYAASKGGVIGFTKTAARELAR--KN---IRVNVVLPGFIATP-----MTEAMPPK 208 (256)
T ss_pred --ccc----------------cchhhhhhcCceeeeeHHHHHHHhh--cC---ceEeEeccccccCh-----hhhhcCHH
Confidence 100 01224432 2 3444444 46 99999999987554 22222222
Q ss_pred HHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 141 VYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 141 i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+...++. ..|+--.| ..+++|...++.+... ...|+.+-|+.|
T Consensus 209 v~~ki~~--~iPmgr~G------------~~EevA~~V~fLAS~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 209 VLDKILG--MIPMGRLG------------EAEEVANLVLFLASDASSYITGTTLEVTGG 253 (256)
T ss_pred HHHHHHc--cCCccccC------------CHHHHHHHHHHHhccccccccceeEEEecc
Confidence 3333332 33432223 3455676666666432 345889988876
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.58 Score=41.88 Aligned_cols=152 Identities=10% Similarity=-0.018 Sum_probs=80.7
Q ss_pred CCCCccEEEEeecccC------C----Ch---HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASR------P----TE---AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~------~----~~---~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+++|+|++.. + +. ...+++|+.++.++++++...-..=.++|++||....-
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~---------- 153 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER---------- 153 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc----------
Confidence 4456899999998421 1 22 23468999998887777654310115899999863221
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
|......+ -.+|.+.+.+.+..+.+ ..+ +.++.|.|+.|-.+........-. ....+. ...|+
T Consensus 154 ----~~~~~~~Y---~asKaal~~l~~~la~el~~~g---Irvn~v~PG~v~T~~~~~~~~~~~---~~~~~~--~~~p~ 218 (257)
T PRK08594 154 ----VVQNYNVM---GVAKASLEASVKYLANDLGKDG---IRVNAISAGPIRTLSAKGVGGFNS---ILKEIE--ERAPL 218 (257)
T ss_pred ----CCCCCchh---HHHHHHHHHHHHHHHHHhhhcC---CEEeeeecCcccCHhHhhhccccH---HHHHHh--hcCCc
Confidence 11000000 13455555554444332 246 999999998886542110000000 000000 01111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
.-+...+|+++++++++..+ ...|+...+..|
T Consensus 219 ------------~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 219 ------------RRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred ------------cccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence 12346788999988877542 245888888655
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.73 Score=41.30 Aligned_cols=151 Identities=9% Similarity=-0.007 Sum_probs=82.7
Q ss_pred CCCccEEEEeecccC------C--------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 10 LTDVTHIFYVTWASR------P--------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~------~--------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
...+|+++|+|+... + +++..+++|+.++..+.+++...-.+=.++|++||....-
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~---------- 151 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER---------- 151 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc----------
Confidence 457899999998421 1 2233578999999888888654311125899999864321
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
|. |..+. ..+|.+.+.+.+..+.+ ..+ +.++.|.|+.|--+-....... . ..+..+.+ ..|
T Consensus 152 ----~~----~~~~~Y~asKaal~~l~~~la~el~~~g---IrVn~i~PG~v~T~~~~~~~~~-~--~~~~~~~~--~~p 215 (260)
T PRK06997 152 ----VV----PNYNTMGLAKASLEASVRYLAVSLGPKG---IRANGISAGPIKTLAASGIKDF-G--KILDFVES--NAP 215 (260)
T ss_pred ----CC----CCcchHHHHHHHHHHHHHHHHHHhcccC---eEEEEEeeCccccchhccccch-h--hHHHHHHh--cCc
Confidence 11 00001 13455555444444332 246 9999999998854321111000 0 01111110 112
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+ .-+...+|+++++.+.+..+ ...|+++.+.+|.
T Consensus 216 ~------------~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 216 L------------RRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGF 251 (260)
T ss_pred c------------cccCCHHHHHHHHHHHhCccccCcceeEEEEcCCh
Confidence 1 12346788999988887642 3568888886653
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.71 Score=39.62 Aligned_cols=148 Identities=14% Similarity=0.122 Sum_probs=85.4
Q ss_pred cCCCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
+++.|.|.||-.-+...++.++....- .+.++++++.+ ++.|++.+-+..---. .+.-.=.|.|.
T Consensus 58 ~~l~g~DaVIsA~~~~~~~~~~~~~k~---~~~li~~l~~a--gv~RllVVGGAGSL~i----------d~g~rLvD~p~ 122 (211)
T COG2910 58 SDLAGHDAVISAFGAGASDNDELHSKS---IEALIEALKGA--GVPRLLVVGGAGSLEI----------DEGTRLVDTPD 122 (211)
T ss_pred hhhcCCceEEEeccCCCCChhHHHHHH---HHHHHHHHhhc--CCeeEEEEcCccceEE----------cCCceeecCCC
Confidence 467788999855333434333333222 66778888776 7899999877521110 01112233433
Q ss_pred CCcccchHHH----HHHHHHHHHhcCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHhCCceeecCCcccc
Q 045430 88 LNVTNFYYTQ----EDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHEGVPLLFPGSKDCW 162 (309)
Q Consensus 88 ~p~p~~~y~~----e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~ 162 (309)
- |.-||.. -+.+...-. ..+ +.||-+=|...|=||++ +-|. .-|..+.+.-.|+
T Consensus 123 f--P~ey~~~A~~~ae~L~~Lr~-~~~---l~WTfvSPaa~f~PGerTg~yr-------------lggD~ll~n~~G~-- 181 (211)
T COG2910 123 F--PAEYKPEALAQAEFLDSLRA-EKS---LDWTFVSPAAFFEPGERTGNYR-------------LGGDQLLVNAKGE-- 181 (211)
T ss_pred C--chhHHHHHHHHHHHHHHHhh-ccC---cceEEeCcHHhcCCccccCceE-------------eccceEEEcCCCc--
Confidence 2 3334442 222322222 245 99999999999999884 3332 1233455544554
Q ss_pred ccceeccCHHHHHHHHHHHhcCCCCCCcceeec
Q 045430 163 EGYSVASDADLIAEQHIWAAVDPYARNEAFNCS 195 (309)
Q Consensus 163 ~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~ 195 (309)
+.++..|-|-|++--+++|.-.+|-|-|.
T Consensus 182 ----SrIS~aDYAiA~lDe~E~~~h~rqRftv~ 210 (211)
T COG2910 182 ----SRISYADYAIAVLDELEKPQHIRQRFTVA 210 (211)
T ss_pred ----eeeeHHHHHHHHHHHHhcccccceeeeec
Confidence 55667778888887777776667777653
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.047 Score=48.26 Aligned_cols=148 Identities=11% Similarity=0.071 Sum_probs=85.1
Q ss_pred CCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..+|+++|+|+... + ++...+++|+.++..++.++...-..=.++|++||.......
T Consensus 72 g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~---------- 141 (241)
T PF13561_consen 72 GRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM---------- 141 (241)
T ss_dssp SSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS----------
T ss_pred CCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC----------
Confidence 67899999997422 1 224467999999999988875431112679999987443211
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--c-CCCcceeEEeecCCceecccCCCcchhHHHH-HHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--R-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTL-CVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~-~i~~~l~~~~g~~ 152 (309)
|.... ..+|-+.+.+.+..+.+ . .+ +.+..|.|+.|-.+.. ...... ..+..+. ...|
T Consensus 142 --------~~~~~y~~sKaal~~l~r~lA~el~~~~g---IrVN~V~pG~i~t~~~----~~~~~~~~~~~~~~--~~~p 204 (241)
T PF13561_consen 142 --------PGYSAYSASKAALEGLTRSLAKELAPKKG---IRVNAVSPGPIETPMT----ERIPGNEEFLEELK--KRIP 204 (241)
T ss_dssp --------TTTHHHHHHHHHHHHHHHHHHHHHGGHGT---EEEEEEEESSBSSHHH----HHHHTHHHHHHHHH--HHST
T ss_pred --------ccchhhHHHHHHHHHHHHHHHHHhccccC---eeeeeecccceeccch----hccccccchhhhhh--hhhc
Confidence 00000 12344455555554432 2 46 9999999988765421 111000 0111111 1122
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+ .-+...+|+|+++++++... ...||+..|.+|
T Consensus 205 l------------~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 205 L------------GRLGTPEEVANAVLFLASDAASYITGQVIPVDGG 239 (241)
T ss_dssp T------------SSHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred c------------CCCcCHHHHHHHHHHHhCccccCccCCeEEECCC
Confidence 2 12336788999999888643 356899888766
|
... |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.85 Score=40.81 Aligned_cols=152 Identities=8% Similarity=-0.058 Sum_probs=82.8
Q ss_pred CCCCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+++|.|+... + ++++.+++|+.+...++.++...-..=.++|++||.....
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~---------- 152 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK---------- 152 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc----------
Confidence 3456899999998421 1 2344679999999998887643210115899999864321
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
..| ....+ -.+|.+.+.+.+..+.+ ..+ +.+..+.|+.|-.+-........ .....+.+ ..|+
T Consensus 153 --~~~--~~~~Y---~asKaal~~l~~~la~el~~~g---IrVn~v~PG~v~T~~~~~~~~~~---~~~~~~~~--~~p~ 217 (260)
T PRK06603 153 --VIP--NYNVM---GVAKAALEASVKYLANDMGENN---IRVNAISAGPIKTLASSAIGDFS---TMLKSHAA--TAPL 217 (260)
T ss_pred --CCC--cccch---hhHHHHHHHHHHHHHHHhhhcC---eEEEEEecCcCcchhhhcCCCcH---HHHHHHHh--cCCc
Confidence 111 00000 13455554444433332 256 99999999988554211000000 00111111 1121
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
..+...+|+|+++++.+..+ ...|+.+.|..|
T Consensus 218 ------------~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 218 ------------KRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred ------------CCCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence 12345788999999988643 345888888765
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.057 Score=48.83 Aligned_cols=96 Identities=11% Similarity=0.001 Sum_probs=57.8
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+|||+|+.... +.+..+++|+.++.++++++...- .+-.++|++||.....
T Consensus 87 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------ 154 (273)
T PRK08278 87 RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD------------ 154 (273)
T ss_pred HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc------------
Confidence 33578999999984221 224467899999999999986420 0124688887742110
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHI 123 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~ 123 (309)
.... +.... -.+|++.|.+++.++.+ ..+ +.++.+.|+.
T Consensus 155 ~~~~----~~~~~Y~~sK~a~~~~~~~la~el~~~~---I~v~~i~Pg~ 196 (273)
T PRK08278 155 PKWF----APHTAYTMAKYGMSLCTLGLAEEFRDDG---IAVNALWPRT 196 (273)
T ss_pred cccc----CCcchhHHHHHHHHHHHHHHHHHhhhcC---cEEEEEeCCC
Confidence 1000 11111 14567777776666543 245 8999999973
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.58 Score=42.42 Aligned_cols=153 Identities=11% Similarity=0.004 Sum_probs=81.4
Q ss_pred CCCCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+++|+|++.. + +++..+++|+.|..++..++...-..=.++|++||.....
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~---------- 149 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK---------- 149 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc----------
Confidence 3456899999998521 1 2344679999998888777654210115899999863221
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
..|- ...+ -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|-.+....... +....+......
T Consensus 150 --~~~~--~~~Y---~asKaal~~l~~~la~el~~~g---IrVn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~ 212 (274)
T PRK08415 150 --YVPH--YNVM---GVAKAALESSVRYLAVDLGKKG---IRVNAISAGPIKTLAASGIGD-------FRMILKWNEINA 212 (274)
T ss_pred --CCCc--chhh---hhHHHHHHHHHHHHHHHhhhcC---eEEEEEecCccccHHHhccch-------hhHHhhhhhhhC
Confidence 1110 0000 12344433333333321 256 999999999886542111000 000000000011
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
|. .-+...+|+|+++++.+..+ ...|+.+.+.+|.
T Consensus 213 pl----------~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 213 PL----------KKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred ch----------hccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence 11 12345788999988887642 3458888887764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.11 Score=51.52 Aligned_cols=98 Identities=9% Similarity=-0.032 Sum_probs=61.1
Q ss_pred CCCccEEEEeecccC----C-------ChHHHHHhHHHHHHHHHHHhCcCC--CCC-ceEEEEeCCccccCCccccCCCC
Q 045430 10 LTDVTHIFYVTWASR----P-------TEAENCEVNGAMLRNVLRSVIPNA--PNL-RHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~----~-------~~~~~~~vNv~gt~nll~a~~~~~--~~v-~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
..++|+++|+|+... + ++++.+++|+.++.++++++...- .+- .++|++||......
T Consensus 77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~--------- 147 (520)
T PRK06484 77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA--------- 147 (520)
T ss_pred hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC---------
Confidence 356899999998521 1 335578999999999988876431 012 38999999754421
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
..+..++ -.+|.+.+.+.+..+.+ ..+ +.++.++|+.|-.+
T Consensus 148 -----~~~~~~Y---~asKaal~~l~~~la~e~~~~~---i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 148 -----LPKRTAY---SASKAAVISLTRSLACEWAAKG---IRVNAVLPGYVRTQ 190 (520)
T ss_pred -----CCCCchH---HHHHHHHHHHHHHHHHHhhhhC---eEEEEEccCCcCch
Confidence 1111111 13455555554444332 246 99999999988655
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=1.4 Score=39.39 Aligned_cols=150 Identities=11% Similarity=0.027 Sum_probs=79.5
Q ss_pred CCCCccEEEEeecccC------C----ChHH---HHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccccCCccccCCC
Q 045430 9 KLTDVTHIFYVTWASR------P----TEAE---NCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~------~----~~~~---~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
....+|+++|+|++.. + ++++ .+++|+.++.++..++... ..+ .++|++|+....+.
T Consensus 82 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~-g~Iv~is~~~~~~~-------- 152 (256)
T PRK07889 82 HVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG-GSIVGLDFDATVAW-------- 152 (256)
T ss_pred HcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC-ceEEEEeecccccC--------
Confidence 3457999999998531 1 2333 4799999988888776532 112 47888875421110
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
| .... -.+|.+.+.+.+..+.+ ..+ +.++.|.|+.|--+-......... ....+. ...
T Consensus 153 -----~------~~~~Y~asKaal~~l~~~la~el~~~g---Irvn~v~PG~v~T~~~~~~~~~~~---~~~~~~--~~~ 213 (256)
T PRK07889 153 -----P------AYDWMGVAKAALESTNRYLARDLGPRG---IRVNLVAAGPIRTLAAKAIPGFEL---LEEGWD--ERA 213 (256)
T ss_pred -----C------ccchhHHHHHHHHHHHHHHHHHhhhcC---eEEEeeccCcccChhhhcccCcHH---HHHHHH--hcC
Confidence 0 0000 12344444443333321 246 999999999886542111100000 000010 011
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
|+ | +-+...+|+|+++++++..+ ...|+++++..|
T Consensus 214 p~---~--------~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 214 PL---G--------WDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred cc---c--------cccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence 11 1 12346788999988887643 345888888765
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.099 Score=44.49 Aligned_cols=102 Identities=9% Similarity=0.008 Sum_probs=66.0
Q ss_pred cHHHhccCCCCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 2 DTQAKLSKLTDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 2 ~~~~~~~~~~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.+.+...+.+|.|+.|-+=+.. ..-.+.|+++...-...+.+++++. |+|+|+++||..+--.. ..
T Consensus 73 Kl~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~--Gck~fvLvSS~GAd~sS----------rF 140 (238)
T KOG4039|consen 73 KLSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK--GCKTFVLVSSAGADPSS----------RF 140 (238)
T ss_pred HHHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC--CCeEEEEEeccCCCccc----------ce
Confidence 3555667888999988664532 2245668999999888999999886 89999999997322110 00
Q ss_pred CCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC
Q 045430 80 PFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS 131 (309)
Q Consensus 80 p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~ 131 (309)
.- +..|=.-|+-+-|. .. -.++|+||+.+-|-++.+
T Consensus 141 -------lY--~k~KGEvE~~v~eL---~F----~~~~i~RPG~ll~~R~es 176 (238)
T KOG4039|consen 141 -------LY--MKMKGEVERDVIEL---DF----KHIIILRPGPLLGERTES 176 (238)
T ss_pred -------ee--eeccchhhhhhhhc---cc----cEEEEecCcceecccccc
Confidence 00 11122234444432 12 358999999999987743
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.54 Score=41.02 Aligned_cols=144 Identities=9% Similarity=-0.018 Sum_probs=78.8
Q ss_pred ccCCCCccEEEEeecccC-----C-------Ch---HHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCcc
Q 045430 7 LSKLTDVTHIFYVTWASR-----P-------TE---AENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~-----~-------~~---~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~ 69 (309)
.+.+.++|+|||+|+... + +. ...+++|+.++.++..++...- -+..+++++||. .|..
T Consensus 62 ~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~--~~~~-- 137 (235)
T PRK09009 62 SEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAK--VGSI-- 137 (235)
T ss_pred HHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeec--cccc--
Confidence 345567899999998431 0 21 2357889888887777664321 024688888873 2311
Q ss_pred ccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--c--CCCcceeEEeecCCceecccCCCcchhHHHHHHHHH
Q 045430 70 SFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--R--KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAA 144 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~--~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~ 144 (309)
+. +..+.... ..+|.+.+.+.+..+.+ . .+ +.+..+.|+.|..+.....
T Consensus 138 ----------~~-~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~---i~v~~v~PG~v~t~~~~~~------------ 191 (235)
T PRK09009 138 ----------SD-NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKH---GVVLALHPGTTDTALSKPF------------ 191 (235)
T ss_pred ----------cc-CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCC---eEEEEEcccceecCCCcch------------
Confidence 00 00111111 13455555555444432 1 35 8889999998865432110
Q ss_pred HHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeec
Q 045430 145 ICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCS 195 (309)
Q Consensus 145 l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~ 195 (309)
. ...| . ......+++|++++.++..+ ...|+.+.+.
T Consensus 192 --~-~~~~--~----------~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 229 (235)
T PRK09009 192 --Q-QNVP--K----------GKLFTPEYVAQCLLGIIANATPAQSGSFLAYD 229 (235)
T ss_pred --h-hccc--c----------CCCCCHHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence 0 0111 1 12356788999998888653 2356666544
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.55 Score=41.80 Aligned_cols=160 Identities=5% Similarity=-0.114 Sum_probs=80.3
Q ss_pred CCCCccEEEEeecccC----C----ChH---HHHHhHHHHHHH----HHHHhCcCCCCCceEEEEeCCccccCCccccCC
Q 045430 9 KLTDVTHIFYVTWASR----P----TEA---ENCEVNGAMLRN----VLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~----~----~~~---~~~~vNv~gt~n----ll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
...++|+|||+|+... . +.+ +...+|+.++.. ++..+.+.. +-.+||++||..++...
T Consensus 73 ~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~g~iv~isS~~~~~~~------ 145 (259)
T PRK08340 73 LLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK-MKGVLVYLSSVSVKEPM------ 145 (259)
T ss_pred hcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC-CCCEEEEEeCcccCCCC------
Confidence 4457899999998421 1 222 235678766544 344433221 24689999998554311
Q ss_pred CCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh-HHHHHH-HHH-HHhH
Q 045430 74 IRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV-VGTLCV-YAA-ICKH 148 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~-~~~~~i-~~~-l~~~ 148 (309)
| ..... ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|-.+........ ...... +.. ..+.
T Consensus 146 ------~--~~~~y---~~sKaa~~~~~~~la~e~~~~g---I~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (259)
T PRK08340 146 ------P--PLVLA---DVTRAGLVQLAKGVSRTYGGKG---IRAYTVLLGSFDTPGARENLARIAEERGVSFEETWERE 211 (259)
T ss_pred ------C--CchHH---HHHHHHHHHHHHHHHHHhCCCC---EEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHH
Confidence 0 00000 13455555555554442 246 8999999987754422100000 000000 000 0000
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.-...| ..-+...+|+|+++.+++..+ ...|++..+.+|..
T Consensus 212 ~~~~~p----------~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~ 254 (259)
T PRK08340 212 VLERTP----------LKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMT 254 (259)
T ss_pred HhccCC----------ccCCCCHHHHHHHHHHHcCcccccccCceEeecCCcC
Confidence 000111 112456889999998888643 34688888877643
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.37 E-value=2.2 Score=38.19 Aligned_cols=152 Identities=8% Similarity=-0.020 Sum_probs=80.9
Q ss_pred CCCCccEEEEeecccCC-----------Ch---HHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCC
Q 045430 9 KLTDVTHIFYVTWASRP-----------TE---AENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~-----------~~---~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
....+|+++|+|++... +. +..+++|+.++..+.+++...- .+-.++|++||...+-
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~-------- 152 (261)
T PRK08690 81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR-------- 152 (261)
T ss_pred HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc--------
Confidence 34579999999985321 22 2245889998877777653210 0115799998864331
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
..| .... -.+|.+.+.+.+..+.+ ..+ +.++.|.|+.|--+-........ .....+ .
T Consensus 153 ----~~~------~~~~Y~asKaal~~l~~~la~e~~~~g---IrVn~i~PG~v~T~~~~~~~~~~---~~~~~~---~- 212 (261)
T PRK08690 153 ----AIP------NYNVMGMAKASLEAGIRFTAACLGKEG---IRCNGISAGPIKTLAASGIADFG---KLLGHV---A- 212 (261)
T ss_pred ----CCC------CcccchhHHHHHHHHHHHHHHHhhhcC---eEEEEEecCcccchhhhcCCchH---HHHHHH---h-
Confidence 100 0011 12355555444443321 246 99999999988554211110000 000011 0
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...++ ..+...+|+|+++++.+..+ ...|+.+-+..|.
T Consensus 213 ~~~p~----------~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 213 AHNPL----------RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred hcCCC----------CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence 01111 12456888999999888643 3458888776654
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.07 Score=62.21 Aligned_cols=50 Identities=12% Similarity=0.034 Sum_probs=39.7
Q ss_pred CccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCcc
Q 045430 12 DVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKH 63 (309)
Q Consensus 12 ~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~v 63 (309)
++|.|+|.|++..+ +++..+++|+.|+.+++.++... .+++||++||...
T Consensus 2121 ~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~--~~~~IV~~SSvag 2179 (2582)
T TIGR02813 2121 QITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAE--NIKLLALFSSAAG 2179 (2582)
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEechhh
Confidence 69999999985321 33446899999999999999765 4689999999754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.32 Score=43.33 Aligned_cols=93 Identities=8% Similarity=-0.088 Sum_probs=53.7
Q ss_pred ccEEEEeeccc-C--C------C---hHHHHHhHHHHHHHHHHHhCcC---CCC-CceEEEEeCCccccCCccccCCCCC
Q 045430 13 VTHIFYVTWAS-R--P------T---EAENCEVNGAMLRNVLRSVIPN---APN-LRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 13 vd~V~H~A~~~-~--~------~---~~~~~~vNv~gt~nll~a~~~~---~~~-v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.|+|||+|+.. . . + .++.+++|+.|+..+..++... .++ -.+||++||...+..
T Consensus 88 ~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~---------- 157 (256)
T TIGR01500 88 RLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP---------- 157 (256)
T ss_pred eEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC----------
Confidence 36999999842 1 1 1 2347899999987776665432 111 257999999754421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceec
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFG 126 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyG 126 (309)
.| ..+. -.+|.+.+.+.+..+.+ ..+ +.++.+.|+.|-.
T Consensus 158 --~~------~~~~Y~asKaal~~l~~~la~e~~~~~---i~v~~v~PG~v~T 199 (256)
T TIGR01500 158 --FK------GWALYCAGKAARDMLFQVLALEEKNPN---VRVLNYAPGVLDT 199 (256)
T ss_pred --CC------CchHHHHHHHHHHHHHHHHHHHhcCCC---eEEEEecCCcccc
Confidence 00 0000 12345555555444432 245 8999999988743
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.71 Score=41.22 Aligned_cols=38 Identities=11% Similarity=0.037 Sum_probs=29.2
Q ss_pred CCCccEEEEeecccC---C---ChHHHHHhHHHHHHHHHHHhCc
Q 045430 10 LTDVTHIFYVTWASR---P---TEAENCEVNGAMLRNVLRSVIP 47 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~---~---~~~~~~~vNv~gt~nll~a~~~ 47 (309)
+.++|++||+|+... . ++++.+++|+.|+.++++++..
T Consensus 77 ~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 77 LASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred cCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 456899999998521 1 4456789999999999998754
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.93 E-value=0.52 Score=41.20 Aligned_cols=132 Identities=10% Similarity=-0.019 Sum_probs=76.8
Q ss_pred CccEEEEeeccc----C----------CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 12 DVTHIFYVTWAS----R----------PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 12 ~vd~V~H~A~~~----~----------~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.+|.+||+|+.. . .++++.+++|+.++-++++++...-..-.++|++||.. .+
T Consensus 69 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~---~~---------- 135 (223)
T PRK05884 69 HLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN---PP---------- 135 (223)
T ss_pred cCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC---CC----------
Confidence 589999998631 0 02344679999999999998754310115899998863 11
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.. ..+ -.+|.+.+.+.+..+.+ ..+ ..++.|.|+.|..+. + +... ..+
T Consensus 136 ~~-----~~Y---~asKaal~~~~~~la~e~~~~g---I~v~~v~PG~v~t~~----~-------------~~~~-~~p- 185 (223)
T PRK05884 136 AG-----SAE---AAIKAALSNWTAGQAAVFGTRG---ITINAVACGRSVQPG----Y-------------DGLS-RTP- 185 (223)
T ss_pred Cc-----ccc---HHHHHHHHHHHHHHHHHhhhcC---eEEEEEecCccCchh----h-------------hhcc-CCC-
Confidence 10 000 13344444444333321 256 999999998874321 1 0000 001
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
....+|+++.+.+.+..+ ...|++..+.+|.
T Consensus 186 ------------~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~ 218 (223)
T PRK05884 186 ------------PPVAAEIARLALFLTTPAARHITGQTLHVSHGA 218 (223)
T ss_pred ------------CCCHHHHHHHHHHHcCchhhccCCcEEEeCCCe
Confidence 015688999988877542 3458888886654
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.095 Score=43.15 Aligned_cols=52 Identities=6% Similarity=-0.131 Sum_probs=40.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccc
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHY 64 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vY 64 (309)
..+|++||+|+.... ..++.+++|+.+..++.+++... +-.++|++||....
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~g~iv~~sS~~~~ 139 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ--GGGKIVNISSIAGV 139 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH--TTEEEEEEEEGGGT
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehheec--cccceEEecchhhc
Confidence 378999999984322 23457899999999999998873 46889999997544
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=90.62 E-value=1 Score=41.70 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=57.3
Q ss_pred CccEEEEeecccCC------ChH---HHHHhHHHHHHHHHHHhCcCCC---CCceEEEEeCCccc-cCCccccCCCCCCC
Q 045430 12 DVTHIFYVTWASRP------TEA---ENCEVNGAMLRNVLRSVIPNAP---NLRHVCLQTGGKHY-VGPFESFGKIRPHD 78 (309)
Q Consensus 12 ~vd~V~H~A~~~~~------~~~---~~~~vNv~gt~nll~a~~~~~~---~v~r~v~~Ss~~vY-G~~~~~~~~~~~~~ 78 (309)
.+|++||||+...+ +++ ..+++|-.||.|+..++..+-. +..|++++||.... |.. +
T Consensus 112 ~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~----G------ 181 (331)
T KOG1210|consen 112 PIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIY----G------ 181 (331)
T ss_pred CcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcc----c------
Confidence 48999999985433 333 3579999999999888654311 23488888886433 211 0
Q ss_pred CCCCCCCCCCCcccchHHHHH---HHHHHHHhcCCCcceeEEeecCCceecccC
Q 045430 79 TPFTEDLPRLNVTNFYYTQED---ILFEEVEKRKGPLSLTWSVHRPHIIFGFSP 129 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~---~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~ 129 (309)
.+ +..| +|++--- .+++... +.+ +.++..-|+..--||-
T Consensus 182 --ys---aYs~---sK~alrgLa~~l~qE~i-~~~---v~Vt~~~P~~~~tpGf 223 (331)
T KOG1210|consen 182 --YS---AYSP---SKFALRGLAEALRQELI-KYG---VHVTLYYPPDTLTPGF 223 (331)
T ss_pred --cc---cccc---HHHHHHHHHHHHHHHHh-hcc---eEEEEEcCCCCCCCcc
Confidence 11 1111 3444222 2333333 257 8999888887776653
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=90.42 E-value=0.5 Score=44.27 Aligned_cols=52 Identities=15% Similarity=0.115 Sum_probs=40.0
Q ss_pred cCCCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeC
Q 045430 8 SKLTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTG 60 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss 60 (309)
++++++|+|||+|+... .+..+..+.|+...+.+.+.+.+.+ |+. .++.+|.
T Consensus 74 ~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~-iiivvsN 129 (325)
T cd01336 74 EAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNV-KVLVVGN 129 (325)
T ss_pred HHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCe-EEEEecC
Confidence 45778999999999542 2568899999999999999998885 443 3555554
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=90.28 E-value=1.7 Score=39.08 Aligned_cols=151 Identities=9% Similarity=-0.016 Sum_probs=80.2
Q ss_pred CCCCccEEEEeecccCC-----------ChH---HHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccccCCccccCC
Q 045430 9 KLTDVTHIFYVTWASRP-----------TEA---ENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~-----------~~~---~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
....+|+++|+|++... +.+ ..+++|+.+...+.+++... ..+ .++|++||....-
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~iss~~~~~-------- 151 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG-SALLTLSYLGAER-------- 151 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC-cEEEEEecCCCCC--------
Confidence 44568999999984211 122 34688999887777775322 112 5799998863221
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
..| .... -.+|.+.+.+.+..+.+ ..+ +.+..|-|+.|--+-....-.. . ....... ..
T Consensus 152 ----~~~------~~~~Y~asKaal~~l~~~la~el~~~g---IrVn~i~PG~v~T~~~~~~~~~-~--~~~~~~~--~~ 213 (262)
T PRK07984 152 ----AIP------NYNVMGLAKASLEANVRYMANAMGPEG---VRVNAISAGPIRTLAASGIKDF-R--KMLAHCE--AV 213 (262)
T ss_pred ----CCC------CcchhHHHHHHHHHHHHHHHHHhcccC---cEEeeeecCcccchHHhcCCch-H--HHHHHHH--Hc
Confidence 110 0001 13455555555554442 246 8999999988744311000000 0 0001110 11
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.|+ .-+...+|+++++++.+..+ ...|+...+..|.
T Consensus 214 ~p~------------~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~ 251 (262)
T PRK07984 214 TPI------------RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251 (262)
T ss_pred CCC------------cCCCCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence 111 12356788999988887642 3458887776653
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=89.66 E-value=1.9 Score=40.00 Aligned_cols=151 Identities=9% Similarity=-0.085 Sum_probs=82.9
Q ss_pred CCCccEEEEeeccc----CC-------ChHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWAS----RP-------TEAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~----~~-------~~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...+|.+||+|+.. .+ +++..+++|+.+..+++.++... ..+ .++|++||....-.
T Consensus 118 ~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~-G~II~isS~a~~~~----------- 185 (303)
T PLN02730 118 FGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPG-GASISLTYIASERI----------- 185 (303)
T ss_pred cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEechhhcCC-----------
Confidence 45689999999631 12 33446799999999888886543 112 58999998743321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--c-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--R-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
.|- .. .. ..+|.+.+.+.+..+.+ . .+ +.+..|-|+.|--+-... +.... ..+... ....
T Consensus 186 -~p~--~~---~~Y~asKaAl~~l~~~la~El~~~~g---IrVn~V~PG~v~T~~~~~-~~~~~--~~~~~~----~~~~ 249 (303)
T PLN02730 186 -IPG--YG---GGMSSAKAALESDTRVLAFEAGRKYK---IRVNTISAGPLGSRAAKA-IGFID--DMIEYS----YANA 249 (303)
T ss_pred -CCC--Cc---hhhHHHHHHHHHHHHHHHHHhCcCCC---eEEEEEeeCCccCchhhc-ccccH--HHHHHH----HhcC
Confidence 000 00 00 13455555555554442 1 36 999999998775432111 10000 000000 0111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+. ..+...+++++++++.+..+ ...|+.+.+..|-
T Consensus 250 pl----------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~ 286 (303)
T PLN02730 250 PL----------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL 286 (303)
T ss_pred CC----------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence 11 12346788999999888643 3458888776553
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=89.18 E-value=1.2 Score=40.80 Aligned_cols=57 Identities=7% Similarity=-0.055 Sum_probs=40.1
Q ss_pred hccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccc
Q 045430 6 KLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHY 64 (309)
Q Consensus 6 ~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vY 64 (309)
.+....++|+.++.|++... +....+++|+-|+-.+..++. +.+ =.|+|.+||+.-+
T Consensus 85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~--~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN--DGHIVVISSIAGK 154 (282)
T ss_pred HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC--CCeEEEEeccccc
Confidence 34577789999999995322 223367999998877766653 332 3589999998554
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.83 E-value=5.1 Score=35.38 Aligned_cols=96 Identities=8% Similarity=-0.003 Sum_probs=53.8
Q ss_pred CCCCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+++|+|+.... +. .+..++|+.+..+++.+ +.+.. .=.++|++||...+-
T Consensus 74 ~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~~~~~---------- 142 (246)
T PRK05599 74 LAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT-APAAIVAFSSIAGWR---------- 142 (246)
T ss_pred hcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC-CCCEEEEEecccccc----------
Confidence 34578999999985321 11 23456788777665544 33321 125899999974331
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceec
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFG 126 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyG 126 (309)
..| ..+. -.+|.+.+.+.+..+.+ ..+ +.++.+-|+.|..
T Consensus 143 --~~~------~~~~Y~asKaa~~~~~~~la~el~~~~---I~v~~v~PG~v~T 185 (246)
T PRK05599 143 --ARR------ANYVYGSTKAGLDAFCQGLADSLHGSH---VRLIIARPGFVIG 185 (246)
T ss_pred --CCc------CCcchhhHHHHHHHHHHHHHHHhcCCC---ceEEEecCCcccc
Confidence 111 0011 13455555554444432 245 8888899988754
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=87.58 E-value=3.3 Score=38.23 Aligned_cols=151 Identities=9% Similarity=-0.012 Sum_probs=80.7
Q ss_pred CCCCccEEEEeeccc----CC-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWAS----RP-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~----~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+++|.|+.. .+ +++..+++|+.|..++..++...-..=.++|.+||....-
T Consensus 116 ~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~------------ 183 (299)
T PRK06300 116 DFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMR------------ 183 (299)
T ss_pred HcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcC------------
Confidence 445799999999742 12 2344579999999999888765311114688888753321
Q ss_pred CCCCCCCCCCCC-c-ccchHHHHHHHHHHHHh--c-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLN-V-TNFYYTQEDILFEEVEK--R-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p-~-p~~~y~~e~~~~~~~~~--~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
..| ... . -.+|.+.+.+.+..+.+ . .+ +.+..|.|+.|--+..... .... .....+. ...|
T Consensus 184 ~~p------~~~~~Y~asKaAl~~lt~~la~el~~~~g---IrVn~V~PG~v~T~~~~~~-~~~~--~~~~~~~--~~~p 249 (299)
T PRK06300 184 AVP------GYGGGMSSAKAALESDTKVLAWEAGRRWG---IRVNTISAGPLASRAGKAI-GFIE--RMVDYYQ--DWAP 249 (299)
T ss_pred cCC------CccHHHHHHHHHHHHHHHHHHHHhCCCCC---eEEEEEEeCCccChhhhcc-cccH--HHHHHHH--hcCC
Confidence 111 000 0 12344444444433332 1 36 9999999988754321110 0000 0000110 0111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+ .-+...+++++++++.+..+ ...|+++.+.+|
T Consensus 250 ~------------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 284 (299)
T PRK06300 250 L------------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284 (299)
T ss_pred C------------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 1 12345788999988877542 345888888655
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=86.64 E-value=1.1 Score=41.93 Aligned_cols=51 Identities=18% Similarity=0.163 Sum_probs=40.3
Q ss_pred cCCCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEe
Q 045430 8 SKLTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQT 59 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~S 59 (309)
++++++|+|+|+|+.+. .+..+....|+.-.+++...+.+.+ |+. .++.+|
T Consensus 72 ~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~-iiivvs 126 (323)
T cd00704 72 EAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTV-KVLVVG 126 (323)
T ss_pred HHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 46778999999999542 2667899999999999999999984 653 355555
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=86.50 E-value=1.2 Score=41.39 Aligned_cols=51 Identities=12% Similarity=0.184 Sum_probs=42.5
Q ss_pred cCCCCccEEEEeecc-cCC--ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeC
Q 045430 8 SKLTDVTHIFYVTWA-SRP--TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~-~~~--~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss 60 (309)
++++++|.|+-+|+. ..+ +..+....|+..++++++++.++ +.+++|.++|
T Consensus 65 ~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~--~~~~ivivvs 118 (312)
T PRK05086 65 PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT--CPKACIGIIT 118 (312)
T ss_pred HHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEcc
Confidence 456779999999985 333 56789999999999999999998 5788988887
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=86.40 E-value=5 Score=37.26 Aligned_cols=93 Identities=14% Similarity=0.012 Sum_probs=58.4
Q ss_pred HhccCCCCccEEEEeeccc---CC-------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccc
Q 045430 5 AKLSKLTDVTHIFYVTWAS---RP-------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFES 70 (309)
Q Consensus 5 ~~~~~~~~vd~V~H~A~~~---~~-------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~ 70 (309)
+.+++ .|.-.|+|.||+. .+ +.....++|.-||-.+-.+. +++ =.|+|.+||.. |
T Consensus 100 ~~l~~-~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a---rGRvVnvsS~~--G----- 168 (322)
T KOG1610|consen 100 KHLGE-DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA---RGRVVNVSSVL--G----- 168 (322)
T ss_pred Hhccc-ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc---cCeEEEecccc--c-----
Confidence 33443 3578899999843 22 33446799999988776664 443 25999999962 1
Q ss_pred cCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCC
Q 045430 71 FGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPH 122 (309)
Q Consensus 71 ~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~ 122 (309)
..|. |.... -.|||+.|.+....-.+ ..| ++++|+=|+
T Consensus 169 -------R~~~----p~~g~Y~~SK~aVeaf~D~lR~EL~~fG---V~VsiiePG 209 (322)
T KOG1610|consen 169 -------RVAL----PALGPYCVSKFAVEAFSDSLRRELRPFG---VKVSIIEPG 209 (322)
T ss_pred -------CccC----cccccchhhHHHHHHHHHHHHHHHHhcC---cEEEEeccC
Confidence 1111 01011 15788888775443221 388 999999999
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=84.99 E-value=5.1 Score=36.90 Aligned_cols=54 Identities=9% Similarity=-0.071 Sum_probs=34.6
Q ss_pred CCCCccEEEEee-ccc------CC-------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCc
Q 045430 9 KLTDVTHIFYVT-WAS------RP-------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGK 62 (309)
Q Consensus 9 ~~~~vd~V~H~A-~~~------~~-------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~ 62 (309)
....+|+++|+| +.. .+ ++.+.+++|+.++..++.++...- .+=.+||++||..
T Consensus 92 ~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~ 161 (305)
T PRK08303 92 EQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT 161 (305)
T ss_pred HcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence 445789999999 631 11 223356889988888777664321 0125899999853
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.46 E-value=8.3 Score=33.76 Aligned_cols=91 Identities=5% Similarity=-0.147 Sum_probs=50.5
Q ss_pred CccEEEEeecc-cC--C----ChHH---HHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 12 DVTHIFYVTWA-SR--P----TEAE---NCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 12 ~vd~V~H~A~~-~~--~----~~~~---~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.+|++||+|+. .. + +.++ .+++|+.++.+++.+ +++.+ +-.++|++||...+.
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~~~~~------------ 149 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN-KKGVIVNVISHDDHQ------------ 149 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCceEEEEecCCCCC------------
Confidence 68999999962 21 1 3333 346687777666544 33321 124799999853221
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
. .+. ..+|-+.+.+.+..+.+ ..+ +.+..|.|+.|-..
T Consensus 150 ~---------~~~Y~asKaal~~~~~~la~el~~~~---Irvn~v~PG~i~t~ 190 (227)
T PRK08862 150 D---------LTGVESSNALVSGFTHSWAKELTPFN---IRVGGVVPSIFSAN 190 (227)
T ss_pred C---------cchhHHHHHHHHHHHHHHHHHHhhcC---cEEEEEecCcCcCC
Confidence 0 011 13344444443333321 256 99999999987554
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=81.95 E-value=2.4 Score=39.66 Aligned_cols=52 Identities=17% Similarity=0.075 Sum_probs=40.5
Q ss_pred cCCCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeC
Q 045430 8 SKLTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTG 60 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss 60 (309)
++++++|.|+|+|+... .+..+....|+...+.+.+.+.+++ |+ -.++.+|-
T Consensus 71 ~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~-~iiivvsN 126 (324)
T TIGR01758 71 VAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKD-CKVLVVGN 126 (324)
T ss_pred HHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCC-eEEEEeCC
Confidence 56778999999999542 2568899999999999999999884 54 34555554
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=80.34 E-value=2.1 Score=40.12 Aligned_cols=109 Identities=11% Similarity=0.049 Sum_probs=70.8
Q ss_pred cCCCCccEEEEeeccc---CCChHHHHHhHHHHHHHHHHHhCcCCC-CCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWAS---RPTEAENCEVNGAMLRNVLRSVIPNAP-NLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~---~~~~~~~~~vNv~gt~nll~a~~~~~~-~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
++++++|+|+.+|+.. ..+..+....|+...+.+.+.+.+++| +. .++.+|-+-=.-. .. +.+
T Consensus 74 ~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~-iiivvsNPvD~~t-----------~~-~~k 140 (322)
T cd01338 74 VAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDV-KVLVVGNPCNTNA-----------LI-AMK 140 (322)
T ss_pred HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCe-EEEEecCcHHHHH-----------HH-HHH
Confidence 4677899999999853 226677899999999999999999873 43 4666654210000 00 111
Q ss_pred CCC-CCCc---ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc
Q 045430 84 DLP-RLNV---TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM 133 (309)
Q Consensus 84 ~~p-~~p~---p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~ 133 (309)
.++ ..+. ..++...+.+....+.+ .+ .+...+|..+|||+...+.+
T Consensus 141 ~sg~~p~~~ViG~t~LDs~Rl~~~la~~-lg---v~~~~v~~~~V~GeHG~s~v 190 (322)
T cd01338 141 NAPDIPPDNFTAMTRLDHNRAKSQLAKK-AG---VPVTDVKNMVIWGNHSPTQY 190 (322)
T ss_pred HcCCCChHheEEehHHHHHHHHHHHHHH-hC---cChhHeEEEEEEeCCcccEE
Confidence 111 1111 13566777776666664 67 89999999999999643433
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.08 E-value=11 Score=34.28 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=72.4
Q ss_pred CCccEEEEeeccc--CC-------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWAS--RP-------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~--~~-------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..||..+.+||.. .+ ..++++++|+.++..+-.++ .+. +=.++|-++|...|-..
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~--~~G~IiNI~S~ag~~p~---------- 150 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER--GAGHIINIGSAAGLIPT---------- 150 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCceEEEEechhhcCCC----------
Confidence 4699999999843 21 33558899999877665554 343 23579999998666310
Q ss_pred CCCCCCCCCCCCcccchHHHHHH--------HHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDI--------LFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~--------~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
|. .+-|.++|. +++..+ ..| +.++.|-|+.|.= ++.. . +
T Consensus 151 -----------p~-~avY~ATKa~v~~fSeaL~~EL~-~~g---V~V~~v~PG~~~T----~f~~-~----------~-- 197 (265)
T COG0300 151 -----------PY-MAVYSATKAFVLSFSEALREELK-GTG---VKVTAVCPGPTRT----EFFD-A----------K-- 197 (265)
T ss_pred -----------cc-hHHHHHHHHHHHHHHHHHHHHhc-CCC---eEEEEEecCcccc----cccc-c----------c--
Confidence 11 233555543 333333 367 9999999976543 2221 0 0
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD 184 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~ 184 (309)
+.... ..+ -..-+...+++|+..+.++.+
T Consensus 198 ~~~~~-~~~-----~~~~~~~~~~va~~~~~~l~~ 226 (265)
T COG0300 198 GSDVY-LLS-----PGELVLSPEDVAEAALKALEK 226 (265)
T ss_pred ccccc-ccc-----chhhccCHHHHHHHHHHHHhc
Confidence 00100 000 013456788899998888765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 309 | ||||
| 2v6f_A | 364 | Structure Of Progesterone 5beta-Reductase From Digi | 1e-123 |
| >pdb|2V6F|A Chain A, Structure Of Progesterone 5beta-Reductase From Digitalis Lanata Length = 364 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 309 | |||
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 1e-112 |
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 329 bits (845), Expect = e-112
Identities = 217/309 (70%), Positives = 251/309 (81%), Gaps = 5/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
DD+QAKLS LTDVTH+FYVTWA+R TE ENCE N M RNVL +VIPN PNL+H+ LQTG
Sbjct: 61 DDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTG 120
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHY+GPFES+GKI HD P+TEDLPRL NFYY EDI+ EEVEK++G LTWSVHR
Sbjct: 121 RKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEG---LTWSVHR 177
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P IFGFSPYSMMN+VGTLCVYAAICKHEG L F G K W+GYS SDADLIAE HIW
Sbjct: 178 PGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIW 237
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFN SNGDVFKWKH WKVLAEQF +E G ++G ++L+++M+GKE VW
Sbjct: 238 AAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVE-CGEYEEGVDLKLQDLMKGKEPVW 296
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
E+IV+EN L TKL +V +WWF D++L G LDSMNKSKEHGFLGFRNSKN+F++WID
Sbjct: 297 EEIVRENGLTPTKLKDVGIWWFGDVIL-GNECFLDSMNKSKEHGFLGFRNSKNAFISWID 355
Query: 301 KMKTYRIVP 309
K K Y+IVP
Sbjct: 356 KAKAYKIVP 364
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 309 | |||
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.98 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.98 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.98 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.98 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.97 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.97 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.97 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.97 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.97 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.97 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.97 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.97 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.97 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.97 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.97 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.97 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.97 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.97 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.97 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.97 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.97 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.96 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.96 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.96 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.96 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.96 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.96 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.96 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.96 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.96 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.95 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.95 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.95 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.95 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.93 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.93 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.93 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.92 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.91 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.9 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.89 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.86 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.86 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.85 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.81 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.78 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.78 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.77 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.77 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.77 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.76 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.75 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.74 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.72 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.7 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.7 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.64 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.63 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.61 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.59 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.55 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.54 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.53 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.51 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.47 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.44 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.26 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.25 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.17 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.13 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.07 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.07 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.06 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.06 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.02 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.01 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.96 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.95 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.94 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.94 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.93 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.92 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.9 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.88 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.87 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.86 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.85 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.85 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.84 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.83 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.83 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.83 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.83 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.81 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.81 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.81 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.8 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.79 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.78 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.78 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.78 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.77 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.75 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.74 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.74 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.74 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.73 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.73 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.72 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.72 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.72 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.7 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.7 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.69 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.69 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.69 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.69 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.69 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.68 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.68 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.67 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.67 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.66 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.66 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.65 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.65 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.63 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.63 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.63 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.63 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.62 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.62 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.61 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.61 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.6 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.6 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.59 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.58 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.57 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.57 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.57 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.56 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.56 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.56 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.55 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.55 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.54 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.54 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.53 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.53 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.53 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.52 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.52 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.52 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.52 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.51 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.51 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.5 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.5 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.5 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.49 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.48 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.48 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.48 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.47 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.47 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.47 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.47 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.47 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.45 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.45 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.45 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.45 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.45 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.44 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.44 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.44 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.43 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.43 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.43 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.42 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.42 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.42 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.42 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.41 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.41 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.41 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.4 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.4 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.4 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.4 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.39 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.39 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.39 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.38 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.36 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.36 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.36 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.36 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.36 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.36 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.33 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.32 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.3 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.29 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.29 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.27 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.27 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.25 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.25 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.23 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.22 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.22 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.22 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.22 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.22 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.2 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 98.18 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.18 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.17 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.17 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.17 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.16 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.16 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.15 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.15 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.13 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.11 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.11 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.1 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.09 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.09 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.09 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.07 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.99 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 97.98 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 97.96 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.96 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.91 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 97.89 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.88 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 97.85 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 97.82 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.8 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 97.79 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 97.78 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 97.77 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.76 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 97.75 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.73 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 97.71 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 97.65 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.65 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.64 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.63 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.53 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.52 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.46 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 97.44 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.36 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 97.34 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.33 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 97.23 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.19 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 97.15 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.13 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 97.08 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.08 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 97.03 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 96.84 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 96.78 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 96.76 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 96.62 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 96.5 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 96.43 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 96.39 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 96.39 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 96.3 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 96.23 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 96.06 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 95.91 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 95.78 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 95.68 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 95.31 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 94.18 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 93.39 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 92.31 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 87.95 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 85.98 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 80.93 |
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=317.01 Aligned_cols=294 Identities=68% Similarity=1.170 Sum_probs=236.4
Q ss_pred HHHhccCCCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEE-------EEeCCccccCCccccCCCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVC-------LQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v-------~~Ss~~vYG~~~~~~~~~~ 75 (309)
+.++++++..+|+|||+|+....++.+++++|+.||.|++++|++..++++||| |+||..+||.. .
T Consensus 63 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~--~----- 135 (364)
T 2v6g_A 63 SQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKI--E----- 135 (364)
T ss_dssp HHHHHTTCTTCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTS--C-----
T ss_pred HHHHHhcCCCCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhcccc--c-----
Confidence 455666655599999999976678888999999999999999998755799998 79999999863 0
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
....|++|++|..|.++.||.+|+++.+++.+..+ ++++|+||++||||++.+..+.+.+..++..+++..|.++.+
T Consensus 136 ~~~~~~~E~~~~~~~~~~y~~~E~~~~~~~~~~~~---~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 212 (364)
T 2v6g_A 136 SHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEG---LTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRF 212 (364)
T ss_dssp CCCSSBCTTSCCCSSCCHHHHHHHHHHHHHTTSTT---CEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCC
T ss_pred cCCCCCCccccCCccchhhHHHHHHHHHHhhcCCC---ceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceec
Confidence 02468999998766556689999999988753235 999999999999998876555555555666664335778888
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRG 235 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+|++.++....++++|+|+|++++.++.++...|++|||++++++|+.|+++.|++.+|.+.... ....|.++.++++.
T Consensus 213 ~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~p~~~~~~~~~ 291 (364)
T 2v6g_A 213 TGCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEY-EEGVDLKLQDLMKG 291 (364)
T ss_dssp CSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCC-CTTCCCCHHHHTTT
T ss_pred CCCcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCC-CCCCCccHHHHHhh
Confidence 89987665678999999999999999987666789999999999999999999999999875432 01478888888888
Q ss_pred cHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccc-cccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCCC
Q 045430 236 KEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFL-LLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309 (309)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~iP 309 (309)
..+.|+.+.++.++.+..+.+...|.+.+..+. .+ ..+|++|++++||+|.++++++++++++||++.|+||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp 364 (364)
T 2v6g_A 292 KEPVWEEIVRENGLTPTKLKDVGIWWFGDVILG--NECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 364 (364)
T ss_dssp CHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHT--SCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHhCCCccccccccccchhhhccc--cchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 888899888888866554433334665555443 46 6899999988999999999999999999999999998
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=269.04 Aligned_cols=239 Identities=12% Similarity=0.051 Sum_probs=180.2
Q ss_pred CCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
++++|+|||+|+... .++.+++++|+.||.|++++|++. +++||||+||.++||.. ...|++|+
T Consensus 98 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~---------~~~~~~E~ 166 (351)
T 3ruf_A 98 MKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA--QVQSFTYAASSSTYGDH---------PALPKVEE 166 (351)
T ss_dssp TTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTC---------CCSSBCTT
T ss_pred hcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEecHHhcCCC---------CCCCCccC
Confidence 347899999998532 266778999999999999999987 69999999999999964 35689999
Q ss_pred CCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--chhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 85 LPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--MNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 85 ~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
++..|. + .+|+..|+++.+++.+ .+ ++++|+||++||||+.... +..+... +...+ ..|.++.++|++
T Consensus 167 ~~~~p~~~Y~~sK~~~E~~~~~~~~~-~g---~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~g~g 239 (351)
T 3ruf_A 167 NIGNPLSPYAVTKYVNEIYAQVYART-YG---FKTIGLRYFNVFGRRQDPNGAYAAVIPK-WTAAM--LKGDDVYINGDG 239 (351)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCCEEEEECSEESTTCCCCSTTCCHHHH-HHHHH--HHTCCCEEESSS
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH-hC---CCEEEEeeCceeCcCCCCCcchhhHHHH-HHHHH--HcCCCcEEeCCC
Confidence 987655 2 3456667777776654 57 9999999999999987422 1111111 11122 236778888888
Q ss_pred cccccceeccCHHHHHHHHHHHhcC-CCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHH
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVD-PYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEG 238 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~-~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
. +.++++|++|+|++++.++.. +...|++|||++++.+|+.|+++.|++.+|.+..... .+.. +.
T Consensus 240 ~---~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~---~~~~---~~----- 305 (351)
T 3ruf_A 240 E---TSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDK---LSIK---YR----- 305 (351)
T ss_dssp C---CEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC--------E---EE-----
T ss_pred C---eEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccc---cccc---cc-----
Confidence 7 779999999999999998876 4567999999999999999999999999998433210 0000 00
Q ss_pred HHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 239 VWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
...+.. ..+..+|++|+++ +||+|++++++|++++++||++.
T Consensus 306 ---------~~~~~~----------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 306 ---------EFRSGD----------------VRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF 348 (351)
T ss_dssp ---------CCCTTC----------------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCc----------------cceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 000111 1256799999998 79999999999999999999863
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=263.15 Aligned_cols=234 Identities=18% Similarity=0.130 Sum_probs=180.4
Q ss_pred CCCccEEEEeeccc-CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS-RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
++++|+|||+|+.. ..++.+++++|+.||+|++++|++. +++||||+||..+||.. ...|++|+++..
T Consensus 60 ~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~r~v~~SS~~vyg~~---------~~~~~~E~~~~~ 128 (311)
T 3m2p_A 60 LNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYEN--NISNIVYASTISAYSDE---------TSLPWNEKELPL 128 (311)
T ss_dssp TTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCCG---------GGCSBCTTSCCC
T ss_pred hcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCC---------CCCCCCCCCCCC
Confidence 34789999999853 3377889999999999999999987 69999999999999964 256899999876
Q ss_pred Cc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC--cchhHHHHHHHHHHHhHhCCceeecCCccccc
Q 045430 89 NV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS--MMNVVGTLCVYAAICKHEGVPLLFPGSKDCWE 163 (309)
Q Consensus 89 p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~--~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~ 163 (309)
|. + .+|+..|+++++++.+ .+ ++++|+||++||||+... .... +...+ ..|.++.++|++.
T Consensus 129 p~~~Y~~sK~~~E~~~~~~~~~-~g---~~~~ilRp~~v~G~~~~~~~~~~~-----~~~~~--~~~~~~~~~g~~~--- 194 (311)
T 3m2p_A 129 PDLMYGVSKLACEHIGNIYSRK-KG---LCIKNLRFAHLYGFNEKNNYMINR-----FFRQA--FHGEQLTLHANSV--- 194 (311)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHH-SC---CEEEEEEECEEECSCC--CCHHHH-----HHHHH--HTCCCEEESSBCC---
T ss_pred CCchhHHHHHHHHHHHHHHHHH-cC---CCEEEEeeCceeCcCCCCCCHHHH-----HHHHH--HcCCCeEEecCCC---
Confidence 64 2 3456677777777664 68 999999999999998752 2221 11222 2477888888887
Q ss_pred cceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHH
Q 045430 164 GYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQI 243 (309)
Q Consensus 164 ~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
+.++++|++|+|++++.++.++. .|++|||++++.+|+.|+++.|++.+|.+..... .|.+ .
T Consensus 195 ~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~---~~~~-------~------- 256 (311)
T 3m2p_A 195 AKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDALTNYEVANTINNAFGNKDNLLV---KNPN-------A------- 256 (311)
T ss_dssp CCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEE---CSSS-------B-------
T ss_pred eEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCcccHHHHHHHHHHHhCCCCccee---cCCC-------C-------
Confidence 67999999999999999887765 7899999999999999999999999997654210 1111 0
Q ss_pred HHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHCCCCC
Q 045430 244 VKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTYRIVP 309 (309)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~~~iP 309 (309)
+.. ..+..+|++|+++ +||+|+++++++++++++||++.+-.|
T Consensus 257 -------~~~----------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~ 300 (311)
T 3m2p_A 257 -------NEG----------------IHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDVP 300 (311)
T ss_dssp -------CCS----------------CCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-----
T ss_pred -------CCC----------------cCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccCc
Confidence 011 1256799999998 899999999999999999999876543
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=261.48 Aligned_cols=233 Identities=12% Similarity=0.089 Sum_probs=176.2
Q ss_pred CCccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+.. ..++++.+++|+.||.|++++|++. +++||||+||..+||.. ...|++|+.
T Consensus 62 ~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~vyg~~---------~~~~~~E~~ 130 (313)
T 3ehe_A 62 KGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA--GVSRIVFTSTSTVYGEA---------KVIPTPEDY 130 (313)
T ss_dssp TTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGGCSC---------SSSSBCTTS
T ss_pred cCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCchHHhCcC---------CCCCCCCCC
Confidence 3789999999832 2377889999999999999999887 68999999999999964 356899999
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcccc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCW 162 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~ 162 (309)
|..|. + .+|...|.+++.++.+ .+ ++++++||++||||++.... + ..+...+.+ .+.++.+.|++.
T Consensus 131 ~~~~~~~Y~~sK~~~e~~~~~~~~~-~g---~~~~ilRp~~v~G~~~~~~~--~--~~~~~~~~~-~~~~~~~~~~g~-- 199 (313)
T 3ehe_A 131 PTHPISLYGASKLACEALIESYCHT-FD---MQAWIYRFANVIGRRSTHGV--I--YDFIMKLKR-NPEELEILGNGE-- 199 (313)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-TT---CEEEEEECSCEESTTCCCSH--H--HHHHHHHHH-CTTEEEESTTSC--
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHh-cC---CCEEEEeeccccCcCCCcCh--H--HHHHHHHHc-CCCceEEeCCCC--
Confidence 87654 2 3456667777777664 58 99999999999999875311 1 111112211 235677889887
Q ss_pred ccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHH
Q 045430 163 EGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQ 242 (309)
Q Consensus 163 ~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+.++++|++|+|+++++++. +...|++|||++|+++|+.|+++.|++.+|.+.... .... ...|
T Consensus 200 -~~~~~i~v~Dva~a~~~~~~-~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~------~~~~------~~~~-- 263 (313)
T 3ehe_A 200 -QNKSYIYISDCVDAMLFGLR-GDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFR------FTGG------DRGW-- 263 (313)
T ss_dssp -CEECCEEHHHHHHHHHHHTT-CCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEE------EC--------------
T ss_pred -eEEeEEEHHHHHHHHHHHhc-cCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceE------ECCC------ccCC--
Confidence 67999999999999998887 456689999999999999999999999999764321 0000 0000
Q ss_pred HHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHC
Q 045430 243 IVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+... .+..+|++|++++||+|+++++|+++++++||++.
T Consensus 264 --------~~~~----------------~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~ 302 (313)
T 3ehe_A 264 --------KGDV----------------PVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVED 302 (313)
T ss_dssp ------------------------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHHH
T ss_pred --------cccc----------------ceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHhC
Confidence 0110 13478999998899999999999999999999874
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=260.44 Aligned_cols=243 Identities=15% Similarity=0.051 Sum_probs=178.6
Q ss_pred HHhccCCCCccEEEEeecccC------CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 4 QAKLSKLTDVTHIFYVTWASR------PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~~------~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.+.+++. ++|+|||+|+... .++.+++++|+.||+|++++|++. +++||||+||..+||.. .
T Consensus 54 ~~~~~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~v~~SS~~vyg~~---------~ 121 (319)
T 4b8w_A 54 RALFEKV-QPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV--GARKVVSCLSTCIFPDK---------T 121 (319)
T ss_dssp HHHHHHS-CCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEECCGGGSCSS---------C
T ss_pred HHHHhhc-CCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEEcchhhcCCC---------C
Confidence 3444442 5899999998532 377789999999999999999987 69999999999999964 3
Q ss_pred CCCCCCCC----CCCCcc----cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--chhHHHHHHHHHHH-
Q 045430 78 DTPFTEDL----PRLNVT----NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--MNVVGTLCVYAAIC- 146 (309)
Q Consensus 78 ~~p~~E~~----p~~p~p----~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--~~~~~~~~i~~~l~- 146 (309)
..|++|++ +..|.. .+|...|+++.+++.+ .+ ++++|+||++||||++... ...+.+..+...+.
T Consensus 122 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~ 197 (319)
T 4b8w_A 122 TYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQ-YG---CTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLA 197 (319)
T ss_dssp CSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHH
T ss_pred CCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHh-hC---CCEEEEeeccccCCCCCCCCccccccHHHHHHHHHH
Confidence 66899998 333321 1234456666666553 57 9999999999999987421 11111111111100
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCC
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGE 225 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~ 225 (309)
...|.+++++|++. +.++++|++|+|++++.++.++ ...|++|||++++++|+.|+++.|++.+|.+....
T Consensus 198 ~~~~~~~~~~~~g~---~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~----- 269 (319)
T 4b8w_A 198 KSSGSALTVWGTGN---PRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVT----- 269 (319)
T ss_dssp HHHTCCEEEESCSC---CEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEE-----
T ss_pred hccCCceEEeCCCC---eeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEE-----
Confidence 12477888888887 7799999999999999998764 34578999999999999999999999999764321
Q ss_pred CCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 226 RVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
+... .+... ....+|++|+++ +||.|.++++++++++++||++
T Consensus 270 ------~~~~--------------~~~~~----------------~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~ 313 (319)
T 4b8w_A 270 ------FDTT--------------KSDGQ----------------FKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTD 313 (319)
T ss_dssp ------EETT--------------SCCCC----------------SCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHH
T ss_pred ------eCCC--------------CCcCc----------------ccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0000 00110 134789999998 7999999999999999999997
Q ss_pred CC
Q 045430 305 YR 306 (309)
Q Consensus 305 ~~ 306 (309)
..
T Consensus 314 ~~ 315 (319)
T 4b8w_A 314 NY 315 (319)
T ss_dssp SC
T ss_pred HH
Confidence 53
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-34 Score=259.25 Aligned_cols=239 Identities=12% Similarity=-0.006 Sum_probs=175.3
Q ss_pred CCCccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
+++ |+|||+|+.. ..++.+.+++|+.||.|++++|++. +++||||+||..+||.. ...|++|+
T Consensus 61 ~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~vyg~~---------~~~~~~e~ 128 (312)
T 3ko8_A 61 IKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT--GVRTVVFASSSTVYGDA---------DVIPTPEE 128 (312)
T ss_dssp CCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSC---------SSSSBCTT
T ss_pred cCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeCcHHHhCCC---------CCCCCCCC
Confidence 344 9999999842 2267788999999999999999887 68999999999999964 35689999
Q ss_pred CCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccc
Q 045430 85 LPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDC 161 (309)
Q Consensus 85 ~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~ 161 (309)
.|..|. + .+|...|.+++.++.+ .+ ++++++||++||||+....+ + ..+...+.+ .+.++.+.|++.
T Consensus 129 ~~~~p~~~Y~~sK~~~e~~~~~~~~~-~g---~~~~~lrp~~v~g~~~~~~~--~--~~~~~~~~~-~~~~~~~~~~g~- 198 (312)
T 3ko8_A 129 EPYKPISVYGAAKAAGEVMCATYARL-FG---VRCLAVRYANVVGPRLRHGV--I--YDFIMKLRR-NPNVLEVLGDGT- 198 (312)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEECTTCCSSH--H--HHHHHHHHH-CTTEEEEC-----
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH-hC---CCEEEEeeccccCcCCCCCh--H--HHHHHHHHh-CCCCeEEcCCCC-
Confidence 887654 2 3455667777776664 57 99999999999999875311 1 011112211 235677788887
Q ss_pred cccceeccCHHHHHHHHHHHhcC---CCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHH
Q 045430 162 WEGYSVASDADLIAEQHIWAAVD---PYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEG 238 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~---~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+.++++|++|+|++++.++.+ +...|++|||++++.+|+.|+.+.|++.+|.+.... ..|... . ..
T Consensus 199 --~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~~----~--~~ 267 (312)
T 3ko8_A 199 --QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIR---LVPSTP----D--GR 267 (312)
T ss_dssp --CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEE---EC-------------
T ss_pred --eEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCcee---ecCccc----c--cc
Confidence 679999999999999999876 456789999999999999999999999999765321 011100 0 00
Q ss_pred HHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHCCC
Q 045430 239 VWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTYRI 307 (309)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~~~ 307 (309)
+. +... ....+|++|+++ +||+|+++++|+++++++||++.+|
T Consensus 268 ---------~~-~~~~----------------~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 311 (312)
T 3ko8_A 268 ---------GW-PGDV----------------KYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKELW 311 (312)
T ss_dssp -------------CCC----------------SEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred ---------CC-CCCc----------------cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhc
Confidence 00 1111 145789999966 7999999999999999999999876
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=260.77 Aligned_cols=235 Identities=13% Similarity=0.043 Sum_probs=175.8
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+.... ++.+++++|+.+|.|++++|++. +++||||+||..+||.. ...|++|+.+
T Consensus 78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~---------~~~~~~e~~~ 146 (341)
T 3enk_A 78 PITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER--AVKRIVFSSSATVYGVP---------ERSPIDETFP 146 (341)
T ss_dssp CCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGBCSC---------SSSSBCTTSC
T ss_pred CCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEecceEecCC---------CCCCCCCCCC
Confidence 68999999985322 56678999999999999999987 68999999999999864 3668999998
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--------chhHHHHHHHHHHHhHhCCceee
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--------MNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--------~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
..|. + .+|...|.+++.++.+..+ ++++++||++||||++... ...+.. .+.........++++
T Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~---~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 221 (341)
T 3enk_A 147 LSATNPYGQTKLMAEQILRDVEAADPS---WRVATLRYFNPVGAHESGLIGEDPAGIPNNLMP--YVAQVAVGKLEKLRV 221 (341)
T ss_dssp CBCSSHHHHHHHHHHHHHHHHHHHCTT---CEEEEEEECEEECCCTTSSCCCCCSSSCSSHHH--HHHHHHHTSSSCEEE
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCC---ceEEEEeeccccCCccccccCCCcccCccchHH--HHHHHHhcCCCceEE
Confidence 7654 2 3455566666666654345 9999999999999965211 111111 112222222356666
Q ss_pred cC------CccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCC
Q 045430 156 PG------SKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERV 227 (309)
Q Consensus 156 ~G------~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~ 227 (309)
.| ++. +.++++||+|+|++++.++.+ +...|++|||++|+++|+.|+.+.|++.+|.+.+..
T Consensus 222 ~g~~~~~~~g~---~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~------- 291 (341)
T 3enk_A 222 FGSDYPTPDGT---GVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYE------- 291 (341)
T ss_dssp ECSCSSSTTSS---CEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEE-------
T ss_pred eCCccCCCCCC---eeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCccee-------
Confidence 67 666 779999999999999988875 345689999999999999999999999999764321
Q ss_pred CHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHCC
Q 045430 228 RLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTYR 306 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~~ 306 (309)
..... +... .+..+|++|+++ +||+|+++++||++++++||++..
T Consensus 292 ----~~~~~--------------~~~~----------------~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~ 337 (341)
T 3enk_A 292 ----LVARR--------------PGDV----------------AECYANPAAAAETIGWKAERDLERMCADHWRWQENNP 337 (341)
T ss_dssp ----EECCC--------------TTCC----------------SEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHST
T ss_pred ----eCCCC--------------CCCc----------------cccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcC
Confidence 00000 1111 145789999986 799999999999999999999864
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-33 Score=258.42 Aligned_cols=231 Identities=12% Similarity=0.001 Sum_probs=176.3
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++.+++++|+.||.|++++|++. +++||||+||..|||.. . ...|++|++|
T Consensus 98 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vy~~~----~----~~~~~~E~~~ 167 (346)
T 4egb_A 98 DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY--PHIKLVQVSTDEVYGSL----G----KTGRFTEETP 167 (346)
T ss_dssp TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS--TTSEEEEEEEGGGGCCC----C----SSCCBCTTSC
T ss_pred CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCchHHhCCC----C----cCCCcCCCCC
Confidence 4899999998432 256778999999999999999987 68999999999999964 1 2568999998
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccc
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWE 163 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~ 163 (309)
..|. + .+|+..|.++.+++.+ .+ ++++++||++||||++... . ... .+...+ ..|.+++++|++.
T Consensus 168 ~~p~~~Y~~sK~~~E~~~~~~~~~-~g---~~~~ilRp~~v~G~~~~~~-~-~~~-~~~~~~--~~~~~~~~~~~~~--- 235 (346)
T 4egb_A 168 LAPNSPYSSSKASADMIALAYYKT-YQ---LPVIVTRCSNNYGPYQYPE-K-LIP-LMVTNA--LEGKKLPLYGDGL--- 235 (346)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECEEESTTCCTT-S-HHH-HHHHHH--HTTCCCEEETTSC---
T ss_pred CCCCChhHHHHHHHHHHHHHHHHH-hC---CCEEEEeecceeCcCCCcc-c-hHH-HHHHHH--HcCCCceeeCCCC---
Confidence 7665 2 3456677777777664 57 9999999999999987421 1 111 111122 2467788888887
Q ss_pred cceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHH
Q 045430 164 GYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQI 243 (309)
Q Consensus 164 ~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
+.++++|++|+|++++.++..+. .|++|||++++++|+.|+++.+++.+|.+...+. +....
T Consensus 236 ~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~------- 297 (346)
T 4egb_A 236 NVRDWLHVTDHCSAIDVVLHKGR-VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIE----------YVTDR------- 297 (346)
T ss_dssp CEECEEEHHHHHHHHHHHHHHCC-TTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCE----------EECC--------
T ss_pred eEEeeEEHHHHHHHHHHHHhcCC-CCCEEEECCCCceeHHHHHHHHHHHhCCCccccc----------ccCCC-------
Confidence 77999999999999999887664 7899999999999999999999999997654220 01000
Q ss_pred HHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 244 VKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+.. ..+..+|++|+++ +||+|.++++||++++++||++.
T Consensus 298 -------~~~----------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (346)
T 4egb_A 298 -------LGH----------------DRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKN 337 (346)
T ss_dssp --------CC----------------CSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred -------CCC----------------cceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 011 1244689999986 79999999999999999999885
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-33 Score=260.57 Aligned_cols=246 Identities=13% Similarity=0.089 Sum_probs=173.6
Q ss_pred CCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+.... ++.+++++|+.||.|++++|++. + +||||+||.+|||.. ...|++|++
T Consensus 90 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~-~~~v~~SS~~vyg~~---------~~~~~~e~~ 157 (372)
T 3slg_A 90 KKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY--G-KHLVFPSTSEVYGMC---------ADEQFDPDA 157 (372)
T ss_dssp HHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH--T-CEEEEECCGGGGBSC---------CCSSBCTTT
T ss_pred ccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh--C-CcEEEeCcHHHhCCC---------CCCCCCccc
Confidence 378999999985432 66788999999999999999987 6 899999999999964 255788887
Q ss_pred CCC---C--cccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc------hhHHHHHHHHHHHhHh
Q 045430 86 PRL---N--VTNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM------NVVGTLCVYAAICKHE 149 (309)
Q Consensus 86 p~~---p--~p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~------~~~~~~~i~~~l~~~~ 149 (309)
+.. | .|.+.|+ .|+++++++. . + ++++|+||++||||++.+.+ ..+... +...+ ..
T Consensus 158 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~-~-g---~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~--~~ 229 (372)
T 3slg_A 158 SALTYGPINKPRWIYACSKQLMDRVIWGYGM-E-G---LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQ-FLGHI--VR 229 (372)
T ss_dssp CCEEECCTTCTTHHHHHHHHHHHHHHHHHHT-T-T---CEEEEEEECSEECSSCCCTTCSBSCSCHHHHH-HHHHH--HH
T ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHHHHH-C-C---CCEEEEccccccCCCcccccccccccchHHHH-HHHHH--Hc
Confidence 541 1 1323354 5555555544 2 7 99999999999999875311 111111 11222 24
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecC-CCcccHHHHHHHHHHHhccccCCCCCCCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSN-GDVFKWKHLWKVLAEQFEIENYGLPQDGER 226 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~-g~~~s~~el~~~i~~~~G~~~~~~~~~~~~ 226 (309)
|.+++++|++. +.++++|++|+|++++.++..+. ..|++|||++ ++.+|+.|+++.|++.+|.+....
T Consensus 230 ~~~~~~~~~g~---~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~------ 300 (372)
T 3slg_A 230 GENISLVDGGS---QKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYA------ 300 (372)
T ss_dssp TCCEEEGGGGC---CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTH------
T ss_pred CCCcEEeCCCc---eEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccc------
Confidence 77888888887 77999999999999999998764 6799999999 589999999999999999764321
Q ss_pred CCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 227 VRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
..... ..+.+... ..+.........+..+|++|+++ +||+|+++++++++++++||++.
T Consensus 301 -----~~~~~----------~~~~~~~~-----~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 301 -----DSAKR----------VKLVETTS-----GAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp -----HHHHT----------CCEEEC------------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred -----ccccc----------ceeeeccc-----cccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 01000 00000000 00000000012356889999987 79999999999999999999864
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=249.99 Aligned_cols=234 Identities=9% Similarity=0.001 Sum_probs=172.6
Q ss_pred CccEEEEeecccC------CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR------PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 12 ~vd~V~H~A~~~~------~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
++|+|||+|+... .++.+++++|+.+|.|++++|++. +++||||+||..+||.. ...|++|++
T Consensus 55 ~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~vyg~~---------~~~~~~E~~ 123 (321)
T 1e6u_A 55 RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKL---------AKQPMAESE 123 (321)
T ss_dssp CCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTT---------CCSSBCGGG
T ss_pred CCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccHHHcCCC---------CCCCcCccc
Confidence 6899999998543 266789999999999999999986 68999999999999964 256899987
Q ss_pred C----CCCc--c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--chhHHHHHHHHHHHhH--hC-Cc
Q 045430 86 P----RLNV--T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--MNVVGTLCVYAAICKH--EG-VP 152 (309)
Q Consensus 86 p----~~p~--p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--~~~~~~~~i~~~l~~~--~g-~~ 152 (309)
+ ..|. + .+|+..|.++.+++.+ .+ ++++++||++||||++... ....... +...+.+. .| .+
T Consensus 124 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~ilrp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~ 198 (321)
T 1e6u_A 124 LLQGTLEPTNEPYAIAKIAGIKLCESYNRQ-YG---RDYRSVMPTNLYGPHDNFHPSNSHVIPA-LLRRFHEATAQKAPD 198 (321)
T ss_dssp TTSSCCCGGGHHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEESTTCCCCTTCSSHHHH-HHHHHHHHHHHTCSE
T ss_pred cccCCCCCCCCccHHHHHHHHHHHHHHHHH-hC---CCEEEEEeCCcCCcCCCCCCCCCccHHH-HHHHHHHhhhcCCCc
Confidence 3 3321 1 2234456666665543 47 9999999999999987411 0011111 11122111 24 57
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCCCC--------CCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYA--------RNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDG 224 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a--------~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~ 224 (309)
++++|++. +.++++|++|+|++++.++.++.. .|++|||++++++|+.|+++.|++.+|.+.....
T Consensus 199 ~~~~~~g~---~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--- 272 (321)
T 1e6u_A 199 VVVWGSGT---PMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF--- 272 (321)
T ss_dssp EEEESCSC---CEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEE---
T ss_pred eEEcCCCC---EEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEe---
Confidence 77778877 679999999999999999887644 2789999999999999999999999997643110
Q ss_pred CCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHH
Q 045430 225 ERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.| . ++.. ..+..+|++|++++||+|+++++++++++++||++
T Consensus 273 ~~--------~--------------~~~~----------------~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~ 314 (321)
T 1e6u_A 273 DA--------S--------------KPDG----------------TPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLE 314 (321)
T ss_dssp ET--------T--------------SCCC----------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHH
T ss_pred CC--------C--------------CCCC----------------cccccCCHHHHHhcCCccCCcHHHHHHHHHHHHHH
Confidence 00 0 0000 01457899999889999999999999999999987
Q ss_pred C
Q 045430 305 Y 305 (309)
Q Consensus 305 ~ 305 (309)
+
T Consensus 315 ~ 315 (321)
T 1e6u_A 315 N 315 (321)
T ss_dssp T
T ss_pred H
Confidence 5
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-32 Score=248.24 Aligned_cols=229 Identities=10% Similarity=0.019 Sum_probs=176.6
Q ss_pred CCccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
.++|+|||+|+.. ..++.++++ |+.||.|++++|++. +++||||+||..+||.. ...|++|++
T Consensus 68 ~~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~--~v~~~v~~SS~~v~~~~---------~~~~~~E~~ 135 (321)
T 3vps_A 68 SDVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV--GVPKVVVGSTCEVYGQA---------DTLPTPEDS 135 (321)
T ss_dssp TTEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSC---------SSSSBCTTS
T ss_pred ccCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc--CCCeEEEecCHHHhCCC---------CCCCCCCCC
Confidence 3799999999843 235566777 999999999999987 69999999999999964 356899999
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcce-eEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSL-TWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDC 161 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~-~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~ 161 (309)
|..|. + .+|+..|+++.+++.+ .+ + +++|+||++||||+.... .... .+...+. .+.+++++|++.
T Consensus 136 ~~~p~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~~ilRp~~v~G~~~~~~--~~~~-~~~~~~~--~~~~~~~~~~~~- 205 (321)
T 3vps_A 136 PLSPRSPYAASKVGLEMVAGAHQRA-SV---APEVGIVRFFNVYGPGERPD--ALVP-RLCANLL--TRNELPVEGDGE- 205 (321)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHS-SS---SCEEEEEEECEEECTTCCTT--SHHH-HHHHHHH--HHSEEEEETTSC-
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHH-cC---CCceEEEEeccccCcCCCCC--ChHH-HHHHHHH--cCCCeEEeCCCC-
Confidence 87654 2 3456677777777764 57 8 999999999999987531 1111 1111221 356778888887
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHH
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWE 241 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
+.++++|++|+|++++.++.++.. | +|||++|+.+|+.|+++.|+ .+|.+..... .|..
T Consensus 206 --~~~~~v~v~Dva~~~~~~~~~~~~-g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~---~~~~------------- 264 (321)
T 3vps_A 206 --QRRDFTYITDVVDKLVALANRPLP-S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVAR---KQPR------------- 264 (321)
T ss_dssp --CEECEEEHHHHHHHHHHGGGSCCC-S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEE---ECCC-------------
T ss_pred --ceEceEEHHHHHHHHHHHHhcCCC-C-eEEecCCCcccHHHHHHHHH-HhCCCCcccc---CCCC-------------
Confidence 679999999999999998887655 7 99999999999999999999 9997644210 1100
Q ss_pred HHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCC-cCChHHHHHHHHHHHHHCCC
Q 045430 242 QIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLG-FRNSKNSFVNWIDKMKTYRI 307 (309)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p-~~~~~~gl~~t~~~~r~~~~ 307 (309)
+.. ..+..+|++|+++ +||+| +++++++++++++||++.++
T Consensus 265 ---------~~~----------------~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~ 307 (321)
T 3vps_A 265 ---------PNE----------------ITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDL 307 (321)
T ss_dssp ---------TTC----------------CSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred ---------CCC----------------cceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence 011 1255799999998 79999 99999999999999998875
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-32 Score=252.41 Aligned_cols=234 Identities=11% Similarity=0.020 Sum_probs=172.4
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++++++++|+.||.|++++|++. +++||||+||..+||.. ...|++|+++
T Consensus 81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~---------~~~~~~E~~~ 149 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH--GVKNLVFSSSATVYGNP---------QYLPLDEAHP 149 (348)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGCSC---------SSSSBCTTSC
T ss_pred CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCC---------CCCCcCCCCC
Confidence 7899999998532 266789999999999999999886 68999999999999864 2568999998
Q ss_pred CCC-c-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--------chhHHHHHHHHHHHhHhCCcee
Q 045430 87 RLN-V-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--------MNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 87 ~~p-~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--------~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
..| . + .+|...|.++++++.+..+ ++++++||++||||++... ...+. ..+....+..+.+++
T Consensus 150 ~~p~~~~Y~~sK~~~e~~~~~~~~~~~~---~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~ 224 (348)
T 1ek6_A 150 TGGCTNPYGKSKFFIEEMIRDLCQADKT---WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLM--PYVSQVAIGRREALN 224 (348)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHCTT---CEEEEEEECEEECCCTTSSCCCCCSSSCCSHH--HHHHHHHHTSSSCEE
T ss_pred CCCCCCchHHHHHHHHHHHHHHHhcCCC---cceEEEeeccccCCCcccccCcCcccchhhHH--HHHHHHHHhcCCCeE
Confidence 765 2 2 3355566666666543235 9999999999999954110 11111 112222222356677
Q ss_pred ecC------CccccccceeccCHHHHHHHHHHHhcCCC-CCC-cceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCC
Q 045430 155 FPG------SKDCWEGYSVASDADLIAEQHIWAAVDPY-ARN-EAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGER 226 (309)
Q Consensus 155 ~~G------~~~~~~~~~~~~~vd~la~a~i~aa~~~~-a~g-~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~ 226 (309)
++| ++. +.++++|++|+|++++.++.++. ..| ++|||++++++|+.|+++.|++.+|.+.+.. ..|
T Consensus 225 ~~g~~~~~~~g~---~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~ 298 (348)
T 1ek6_A 225 VFGNDYDTEDGT---GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK---VVA 298 (348)
T ss_dssp EECSCSSSSSSS---CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEE---EEC
T ss_pred EeCCcccCCCCc---eEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCcee---eCC
Confidence 766 444 67999999999999999887542 345 9999999999999999999999999753311 001
Q ss_pred CCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 227 VRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.. ++.. .+..+|++|+++ +||+|+++++++++++++||++.
T Consensus 299 --------~~--------------~~~~----------------~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~ 340 (348)
T 1ek6_A 299 --------RR--------------EGDV----------------AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN 340 (348)
T ss_dssp --------CC--------------TTCC----------------SEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred --------CC--------------Cccc----------------hhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Confidence 00 0111 134789999987 79999999999999999999875
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-32 Score=247.81 Aligned_cols=230 Identities=16% Similarity=0.076 Sum_probs=172.9
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCC-ccccCCccccCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGG-KHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~-~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
++|+|||+|+... .++.+.+++|+.||.|++++|++. +++|||++||. .+||.. . ...|.+|++
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~~g~~--~------~~~~~~E~~ 135 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY--GVEKLVFASTGGAIYGEV--P------EGERAEETW 135 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEHHHHHCCC--C------TTCCBCTTS
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCChhhcCCC--C------CCCCcCCCC
Confidence 6899999998532 266778999999999999999876 68999999999 999852 0 246899998
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc-hhHHHHHHHHHHHhHhCCceeec-----
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM-NVVGTLCVYAAICKHEGVPLLFP----- 156 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~-~~~~~~~i~~~l~~~~g~~~~~~----- 156 (309)
|..|. + .+|...|.+++.++.+ .+ ++++++||++||||++.... ..+... +...+. .|.++.++
T Consensus 136 ~~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~lrp~~v~Gp~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 208 (311)
T 2p5y_A 136 PPRPKSPYAASKAAFEHYLSVYGQS-YG---LKWVSLRYGNVYGPRQDPHGEAGVVAI-FAERVL--KGLPVTLYARKTP 208 (311)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECEEECTTCCSSSTTHHHHH-HHHHHH--HTCCEEEECSSST
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHH-cC---CCEEEEeeccccCcCCCCCCcCcHHHH-HHHHHH--cCCCcEEEecccC
Confidence 76554 2 3455666666666654 57 99999999999999874321 111111 111221 36676666
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++. +.++++|++|+|+++++++..+ |++|||++|+.+|+.|+++.|++.+|.+.... ..|..
T Consensus 209 ~~g~---~~~~~i~v~Dva~a~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~-------- 271 (311)
T 2p5y_A 209 GDEG---CVRDYVYVGDVAEAHALALFSL---EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQ---PAPPR-------- 271 (311)
T ss_dssp TSCC---CEECEEEHHHHHHHHHHHHHHC---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEE---EECCC--------
T ss_pred CCCC---eEEeeEEHHHHHHHHHHHHhCC---CCEEEeCCCCCccHHHHHHHHHHHhCCCCCce---eCCCC--------
Confidence 7776 6789999999999999888754 89999999999999999999999999754311 01100
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHC
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+... .+..+|++|++++||+|+++++||++++++||+++
T Consensus 272 --------------~~~~----------------~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 310 (311)
T 2p5y_A 272 --------------PGDL----------------ERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRGA 310 (311)
T ss_dssp --------------TTCC----------------SBCCBCCHHHHTTTCCCSSCHHHHHHHHHHHHHTC
T ss_pred --------------ccch----------------hhccCCHHHHHHCCCCCCCCHHHHHHHHHHHHHhh
Confidence 0111 13478999998899999999999999999999874
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.8e-32 Score=249.90 Aligned_cols=233 Identities=13% Similarity=0.058 Sum_probs=172.6
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++++++++|+.||.|++++|++. +++||||+||..+||.. ...|++|++|
T Consensus 67 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~---------~~~~~~E~~~ 135 (330)
T 2c20_A 67 NIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF--KVDKFIFSSTAATYGEV---------DVDLITEETM 135 (330)
T ss_dssp CEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGGCSC---------SSSSBCTTSC
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc--CCCEEEEeCCceeeCCC---------CCCCCCcCCC
Confidence 7899999998532 266778999999999999999886 68999999999999864 2568999998
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc-------chhHHHHHHHHHHHhHhCCceeec
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM-------MNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~-------~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
..|. + .+|...|.++++++.+ .+ ++++++||++||||++... ..... ..+.......+.+++++
T Consensus 136 ~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 209 (330)
T 2c20_A 136 TNPTNTYGETKLAIEKMLHWYSQA-SN---LRYKIFRYFNVAGATPNGIIGEDHRPETHLI--PLVLQVALGQREKIMMF 209 (330)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHT-SS---CEEEEEECSEEECCCTTCSSCCCCSSCCSHH--HHHHHHHTTSSSCEEEE
T ss_pred CCCCChHHHHHHHHHHHHHHHHHH-hC---CcEEEEecCcccCCCCcCccccccccccchH--HHHHHHHhhcCCCeEEe
Confidence 7654 2 3455567777766653 57 9999999999999974211 11111 11112112223456666
Q ss_pred C------CccccccceeccCHHHHHHHHHHHhcCCCC--CCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCC
Q 045430 157 G------SKDCWEGYSVASDADLIAEQHIWAAVDPYA--RNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVR 228 (309)
Q Consensus 157 G------~~~~~~~~~~~~~vd~la~a~i~aa~~~~a--~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~ 228 (309)
| ++. +.++++|++|+|++++.++.++.. .+++|||++++++|+.|+++.|++.+|.+.+.. ..|
T Consensus 210 g~~~~~~~g~---~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~-- 281 (330)
T 2c20_A 210 GDDYNTPDGT---CIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAE---VAP-- 281 (330)
T ss_dssp CSCCSSSSSS---CEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEE---EEC--
T ss_pred CCccccCCCc---eeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCcee---eCC--
Confidence 6 454 678999999999999988875422 378999999999999999999999999764311 000
Q ss_pred HHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcC-ChHHHHHHHHHHHHHC
Q 045430 229 LEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFR-NSKNSFVNWIDKMKTY 305 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~-~~~~gl~~t~~~~r~~ 305 (309)
.. ++.. ....+|++|+++ +||+|++ +++++++++++||+++
T Consensus 282 ------~~--------------~~~~----------------~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~ 324 (330)
T 2c20_A 282 ------RR--------------AGDP----------------ARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQ 324 (330)
T ss_dssp ------CC--------------SSCC----------------SEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHC
T ss_pred ------CC--------------CCcc----------------cccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHh
Confidence 00 0110 134789999987 7999999 9999999999999875
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-31 Score=249.56 Aligned_cols=235 Identities=13% Similarity=0.052 Sum_probs=175.7
Q ss_pred CCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+... .++++++++|+.||.|++++|.+. +++||||+||..+||.. ...|++|++
T Consensus 101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~---------~~~~~~E~~ 169 (352)
T 1sb8_A 101 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDH---------PGLPKVEDT 169 (352)
T ss_dssp TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTC---------CCSSBCTTC
T ss_pred cCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCC---------CCCCCCCCC
Confidence 37899999998533 267788999999999999999886 68999999999999863 256899999
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--chhHHHHHHHHHHHhHhCCceeecCCcc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--MNVVGTLCVYAAICKHEGVPLLFPGSKD 160 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--~~~~~~~~i~~~l~~~~g~~~~~~G~~~ 160 (309)
+..|. + .+|...|.++..++.+ .+ ++++++||++||||+.... +...... +...+ ..|.++.++|++.
T Consensus 170 ~~~~~~~Y~~sK~~~e~~~~~~~~~-~g---~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~g~g~ 242 (352)
T 1sb8_A 170 IGKPLSPYAVTKYVNELYADVFSRC-YG---FSTIGLRYFNVFGRRQDPNGAYAAVIPK-WTSSM--IQGDDVYINGDGE 242 (352)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCCEEEEECCEECTTCCCCSTTCCHHHH-HHHHH--HHTCCCEEESSSC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHH-cC---CCEEEEEECceeCcCCCCCcchhhHHHH-HHHHH--HCCCCcEEeCCCC
Confidence 86554 2 3345566666666553 57 9999999999999986421 1111111 11122 2367777788877
Q ss_pred ccccceeccCHHHHHHHHHHHhcC-CCCCCcceeecCCCcccHHHHHHHHHHHh---ccccCCCCCCCCCCCHHHHHhcc
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVD-PYARNEAFNCSNGDVFKWKHLWKVLAEQF---EIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~-~~a~g~~fNI~~g~~~s~~el~~~i~~~~---G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
+.++++|++|+|++++.++.. +...|++|||++++++|+.|+++.|++.+ |.+.... |. +..
T Consensus 243 ---~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~-----~~----~~~-- 308 (352)
T 1sb8_A 243 ---TSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHRE-----PV----YRD-- 308 (352)
T ss_dssp ---CEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCC-----CE----EEC--
T ss_pred ---ceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCC-----ce----ecC--
Confidence 679999999999999988875 34568999999999999999999999999 8654321 10 000
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
..+... .+..+|++|+++ +||+|+++++|+++++++||++.
T Consensus 309 ------------~~~~~~----------------~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 309 ------------FREGDV----------------RHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350 (352)
T ss_dssp ------------CCTTCC----------------SBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ------------CCccch----------------hhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 001111 145789999987 79999999999999999999763
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-32 Score=252.21 Aligned_cols=232 Identities=13% Similarity=0.052 Sum_probs=176.8
Q ss_pred CCccEEEEeecccCC---ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
+++|+|||+|+.... ++++++++|+.||.|++++|++. +++||||+||..|||.. . ....|++|+++.
T Consensus 76 ~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~V~~SS~~vyg~~--~-----~~~~~~~E~~~~ 146 (347)
T 4id9_A 76 MGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA--GVRRFVFASSGEVYPEN--R-----PEFLPVTEDHPL 146 (347)
T ss_dssp TTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGTTTT--S-----CSSSSBCTTSCC
T ss_pred hCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHHhCCC--C-----CCCCCcCCCCCC
Confidence 478999999985433 44778999999999999999886 69999999999999963 0 135689999987
Q ss_pred CCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCcee-------------cccCCCc---------chhHHHHHHH
Q 045430 88 LNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIF-------------GFSPYSM---------MNVVGTLCVY 142 (309)
Q Consensus 88 ~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~Vy-------------Gp~~~~~---------~~~~~~~~i~ 142 (309)
.|. + .+|+..|+++..++.+ .+ ++++|+||++|| ||++... ..... ..+.
T Consensus 147 ~~~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~-~~~~ 221 (347)
T 4id9_A 147 CPNSPYGLTKLLGEELVRFHQRS-GA---METVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAI-AELL 221 (347)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHH-SS---SEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHH-HHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHh-cC---CceEEEccceEeecccccccccccCCCCcccccccccccccchhHH-HHHH
Confidence 654 2 3456677777776664 67 999999999999 8874211 01111 0111
Q ss_pred HHHHhHhCCceeecCCccccccceec----cCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccC
Q 045430 143 AAICKHEGVPLLFPGSKDCWEGYSVA----SDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 143 ~~l~~~~g~~~~~~G~~~~~~~~~~~----~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~ 218 (309)
..+ ..|.++.+.|++. +.+++ +|++|+|++++.++.++...|++|||++++.+|+.|+++.+++.+|.+..
T Consensus 222 ~~~--~~~~~~~~~g~~~---~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 296 (347)
T 4id9_A 222 QSR--DIGEPSHILARNE---NGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIV 296 (347)
T ss_dssp HHH--CCSSCCEEEEECT---TCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEE
T ss_pred HHH--HcCCCeEEeCCCC---cccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCc
Confidence 111 2467777778777 56788 99999999999999887567999999999999999999999999997644
Q ss_pred CCCCCCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHH
Q 045430 219 GLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVN 297 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~ 297 (309)
... .| ..+ .+..+|++|+++ |||+|++++++++++
T Consensus 297 ~~~---~p------------------------~~~-----------------~~~~~d~~k~~~~lG~~p~~~~~~~l~~ 332 (347)
T 4id9_A 297 TVD---FP------------------------GDG-----------------VYYHTSNERIRNTLGFEAEWTMDRMLEE 332 (347)
T ss_dssp EEE---CS------------------------SCC-----------------CBCCBCCHHHHHHHCCCCCCCHHHHHHH
T ss_pred eee---CC------------------------Ccc-----------------cccccCHHHHHHHhCCCCCCCHHHHHHH
Confidence 210 00 011 034689999997 799999999999999
Q ss_pred HHHHHHHC
Q 045430 298 WIDKMKTY 305 (309)
Q Consensus 298 t~~~~r~~ 305 (309)
+++||++.
T Consensus 333 ~~~~~~~~ 340 (347)
T 4id9_A 333 AATARRQR 340 (347)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99999864
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-31 Score=247.55 Aligned_cols=229 Identities=11% Similarity=0.047 Sum_probs=174.1
Q ss_pred CCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
.++|+|||+|+... .++++++++|+.||.|++++|.+. +++||||+||.++||.. ...|++|++
T Consensus 75 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~--~~~~~v~~SS~~vyg~~---------~~~~~~E~~ 143 (337)
T 1r6d_A 75 RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA--GVGRVVHVSTNQVYGSI---------DSGSWTESS 143 (337)
T ss_dssp TTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGCCC---------SSSCBCTTS
T ss_pred cCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecchHHhCCC---------CCCCCCCCC
Confidence 57899999998533 266789999999999999999987 68999999999999963 245799998
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC--cchhHHHHHHHHHHHhHhCCceeecCCcc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS--MMNVVGTLCVYAAICKHEGVPLLFPGSKD 160 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~--~~~~~~~~~i~~~l~~~~g~~~~~~G~~~ 160 (309)
|..|. + .+|...|.++..++.+ .+ ++++++||++||||++.. ..+. +...+ ..|.+++++|++.
T Consensus 144 ~~~~~~~Y~~sK~~~e~~~~~~~~~-~g---~~~~ilrp~~v~G~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~ 212 (337)
T 1r6d_A 144 PLEPNSPYAASKAGSDLVARAYHRT-YG---LDVRITRCCNNYGPYQHPEKLIPL-----FVTNL--LDGGTLPLYGDGA 212 (337)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECEEECTTCCTTSHHHH-----HHHHH--HTTCCEEEETTSC
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHH-HC---CCEEEEEeeeeECCCCCCCChHHH-----HHHHH--hcCCCcEEeCCCC
Confidence 76554 2 3455566666666553 57 999999999999998732 2111 11121 2366777778877
Q ss_pred ccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHH
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+.++++|++|+|++++.++.++ ..|++|||++++++|+.|+++.|++.+|.+.+... +....
T Consensus 213 ---~~~~~i~v~Dva~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~---- 274 (337)
T 1r6d_A 213 ---NVREWVHTDDHCRGIALVLAGG-RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVR----------KVADR---- 274 (337)
T ss_dssp ---CEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEE----------EECCC----
T ss_pred ---eeEeeEeHHHHHHHHHHHHhCC-CCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccce----------ecCCC----
Confidence 6789999999999999888654 46899999999999999999999999997532110 00000
Q ss_pred HHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+.. ..+..+|++|+++ +||+|.++++++++++++||++.
T Consensus 275 ----------~~~----------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 314 (337)
T 1r6d_A 275 ----------KGH----------------DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (337)
T ss_dssp ----------TTC----------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred ----------CCC----------------cceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence 000 0134689999987 79999999999999999999875
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=242.40 Aligned_cols=226 Identities=11% Similarity=0.030 Sum_probs=173.5
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++.+.+++|+.||.|++++|++. ++ ||||+||..+||.. ...|++|+++
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~v~~SS~~vy~~~---------~~~~~~E~~~ 123 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV--GA-KLVYISTDYVFQGD---------RPEGYDEFHN 123 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH--TC-EEEEEEEGGGSCCC---------CSSCBCTTSC
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEchhhhcCCC---------CCCCCCCCCC
Confidence 6899999998532 477889999999999999999987 56 79999999999864 3578999998
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
..| .+.|+..|...|...+... .+++++||++||||+..+..... ...+ ..+.+++++|+ +.+
T Consensus 124 ~~p--~~~Y~~sK~~~E~~~~~~~---~~~~ilR~~~v~G~~~~~~~~~~-----~~~~--~~~~~~~~~~~-----~~~ 186 (287)
T 3sc6_A 124 PAP--INIYGASKYAGEQFVKELH---NKYFIVRTSWLYGKYGNNFVKTM-----IRLG--KEREEISVVAD-----QIG 186 (287)
T ss_dssp CCC--CSHHHHHHHHHHHHHHHHC---SSEEEEEECSEECSSSCCHHHHH-----HHHH--TTCSEEEEECS-----CEE
T ss_pred CCC--CCHHHHHHHHHHHHHHHhC---CCcEEEeeeeecCCCCCcHHHHH-----HHHH--HcCCCeEeecC-----ccc
Confidence 654 4568877777776554345 67899999999999876543321 1111 13677887776 558
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHH
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKE 246 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (309)
+++|++|+|++++.++.++. +++|||++++.+|+.|+.+.+++.+|.+... .+.+...+
T Consensus 187 ~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-----~~~~~~~~-------------- 245 (287)
T 3sc6_A 187 SPTYVADLNVMINKLIHTSL--YGTYHVSNTGSCSWFEFAKKIFSYANMKVNV-----LPVSTEEF-------------- 245 (287)
T ss_dssp CCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCEEHHHHHHHHHHHHTCCCEE-----EEECHHHH--------------
T ss_pred CceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcccHHHHHHHHHHHcCCCcce-----eeeehhhc--------------
Confidence 99999999999999988765 7899999999999999999999999976432 12222111
Q ss_pred hCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHH
Q 045430 247 NQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 247 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
...... ..+..+|++|++++||.|.++++++++++++|+++
T Consensus 246 -~~~~~~----------------~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 246 -GAAAAR----------------PKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp -CCSSCC----------------CSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred -CcccCC----------------CCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 000011 12457899999988999999999999999999875
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=247.12 Aligned_cols=254 Identities=12% Similarity=0.029 Sum_probs=169.0
Q ss_pred CCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++++|+|||+|+... .++++++++|+.||.|++++|.+. +++||||+||..+||.. . + ...| +|++|
T Consensus 75 ~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~--~-~----~~~~-~E~~~ 144 (342)
T 2x4g_A 75 LRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA--RVPRILYVGSAYAMPRH--P-Q----GLPG-HEGLF 144 (342)
T ss_dssp TTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH--TCSCEEEECCGGGSCCC--T-T----SSCB-CTTCC
T ss_pred HcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHhhCcC--C-C----CCCC-CCCCC
Confidence 457899999998432 366779999999999999999987 68999999999999864 0 0 1245 99998
Q ss_pred CCC----c-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccC-CCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 87 RLN----V-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSP-YSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 87 ~~p----~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~-~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
..| . + .+|+..|.++++++. . + ++++++||++||||+. ...... +...+. .|.++.+ |+
T Consensus 145 ~~p~~~~~~~Y~~sK~~~e~~~~~~~~-~-g---~~~~ilrp~~v~g~~~~~~~~~~-----~~~~~~--~~~~~~~-~~ 211 (342)
T 2x4g_A 145 YDSLPSGKSSYVLCKWALDEQAREQAR-N-G---LPVVIGIPGMVLGELDIGPTTGR-----VITAIG--NGEMTHY-VA 211 (342)
T ss_dssp CSSCCTTSCHHHHHHHHHHHHHHHHHH-T-T---CCEEEEEECEEECSCCSSCSTTH-----HHHHHH--TTCCCEE-EC
T ss_pred CCccccccChHHHHHHHHHHHHHHHhh-c-C---CcEEEEeCCceECCCCccccHHH-----HHHHHH--cCCCccc-cC
Confidence 776 3 1 234455666665554 3 7 9999999999999986 311221 111222 3555555 44
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHH
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEG 238 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+.++++|++|+|++++.++.++.. |++|||++++ +|+.|+++.+++.+|.+... ..|.+....+....+
T Consensus 212 -----~~~~~i~v~Dva~~~~~~~~~~~~-g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~----~~p~~~~~~~~~~~~ 280 (342)
T 2x4g_A 212 -----GQRNVIDAAEAGRGLLMALERGRI-GERYLLTGHN-LEMADLTRRIAELLGQPAPQ----PMSMAMARALATLGR 280 (342)
T ss_dssp -----CEEEEEEHHHHHHHHHHHHHHSCT-TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE----EECHHHHHHHHHHHH
T ss_pred -----CCcceeeHHHHHHHHHHHHhCCCC-CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC----cCCHHHHHHHHHHHH
Confidence 568999999999999998876654 8999999999 99999999999999976431 133332222211111
Q ss_pred HHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCC-CCcCChHHHHHHHHHHHHHCCCCC
Q 045430 239 VWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGF-LGFRNSKNSFVNWIDKMKTYRIVP 309 (309)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf-~p~~~~~~gl~~t~~~~r~~~~iP 309 (309)
. +.+..+. ++++.. ... ..+..+..+|++|+++ +|| +| ++++++++++++||++.|+++
T Consensus 281 ~---~~~~~~~-~~~~~~----~~~---~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~~ 341 (342)
T 2x4g_A 281 L---RYRVSGQ-LPLLDE----TAI---EVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYFN 341 (342)
T ss_dssp C---------------------------CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCCC
T ss_pred H---HHHhhCC-CCCCCH----HHH---HHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCCC
Confidence 1 0001111 112111 000 0012367899999998 699 99 999999999999999999985
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-32 Score=244.57 Aligned_cols=213 Identities=14% Similarity=0.083 Sum_probs=167.0
Q ss_pred ccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCccc
Q 045430 13 VTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNVTN 92 (309)
Q Consensus 13 vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~p~ 92 (309)
+|+|||+|+....+++++.++|+.+|.|++++|++. +++||||+||..+||.. ...|++|++|..| .
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~---------~~~~~~E~~~~~p--~ 130 (286)
T 3gpi_A 64 PEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGA--PLQHVFFVSSTGVYGQE---------VEEWLDEDTPPIA--K 130 (286)
T ss_dssp CSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTS--CCCEEEEEEEGGGCCCC---------CSSEECTTSCCCC--C
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhC--CCCEEEEEcccEEEcCC---------CCCCCCCCCCCCC--C
Confidence 999999999655567889999999999999999976 79999999999999964 3568999998654 4
Q ss_pred chHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccCHH
Q 045430 93 FYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDAD 172 (309)
Q Consensus 93 ~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd 172 (309)
+.|+..|...|.. . .. ++++|+||++||||+...++. .+ .. . ...|++. +.++++|++
T Consensus 131 ~~Y~~sK~~~E~~-~-~~---~~~~ilR~~~v~G~~~~~~~~---------~~---~~-~-~~~~~~~---~~~~~i~v~ 188 (286)
T 3gpi_A 131 DFSGKRMLEAEAL-L-AA---YSSTILRFSGIYGPGRLRMIR---------QA---QT-P-EQWPARN---AWTNRIHRD 188 (286)
T ss_dssp SHHHHHHHHHHHH-G-GG---SSEEEEEECEEEBTTBCHHHH---------HT---TC-G-GGSCSSB---CEECEEEHH
T ss_pred ChhhHHHHHHHHH-H-hc---CCeEEEecccccCCCchhHHH---------HH---Hh-c-ccCCCcC---ceeEEEEHH
Confidence 5799999988877 4 34 899999999999998752211 11 12 2 2346665 668999999
Q ss_pred HHHHHHHHHhcCC--CCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCCC
Q 045430 173 LIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQ 250 (309)
Q Consensus 173 ~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 250 (309)
|+|++++.++.++ ...|++||+++|+++|+.|+++.|++.+|.+.... ..+ .
T Consensus 189 Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~-------~---------------- 242 (286)
T 3gpi_A 189 DGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAG---ATP-------P---------------- 242 (286)
T ss_dssp HHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCS---CCC-------C----------------
T ss_pred HHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCC---CCc-------c----------------
Confidence 9999999998764 46789999999999999999999999999765422 000 0
Q ss_pred cccccccchhhHHHHHhhcccccccChhhHHhcCCCCcC-ChHHHHHHHHHHHHH
Q 045430 251 LTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFR-NSKNSFVNWIDKMKT 304 (309)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~-~~~~gl~~t~~~~r~ 304 (309)
.. .+..+|++|++++||+|++ +++||++++++|+..
T Consensus 243 -~~-----------------~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~ 279 (286)
T 3gpi_A 243 -VQ-----------------GNKKLSNARLLASGYQLIYPDYVSGYGALLAAMRE 279 (286)
T ss_dssp -BC-----------------SSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC
T ss_pred -cC-----------------CCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhc
Confidence 00 1457899999988999999 799999999999864
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=244.60 Aligned_cols=232 Identities=9% Similarity=0.062 Sum_probs=154.5
Q ss_pred CccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 12 ~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
++|+|||+|+... .++++++++|+.||.|++++|++. ++ ||||+||..+||.. ...|++|+++..
T Consensus 68 ~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g~~---------~~~~~~E~~~~~ 135 (310)
T 1eq2_A 68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGR---------TSDFIESREYEK 135 (310)
T ss_dssp SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGTTC---------CSCBCSSGGGCC
T ss_pred CCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeHHHhCCC---------CCCCCCCCCCCC
Confidence 5899999998432 377889999999999999999987 67 99999999999863 245799998766
Q ss_pred Cc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--chhHHHHHHHHHHHhHhCCceeecCCccccc
Q 045430 89 NV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--MNVVGTLCVYAAICKHEGVPLLFPGSKDCWE 163 (309)
Q Consensus 89 p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~ 163 (309)
|. + .+|...|.++.+++.+ .+ ++++++||++||||++... +..... .+...+ ..|.++.++|++.
T Consensus 136 p~~~Y~~sK~~~e~~~~~~~~~-~g---~~~~~lrp~~v~G~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~g~--- 205 (310)
T 1eq2_A 136 PLNVYGYSKFLFDEYVRQILPE-AN---SQIVGFRYFNVYGPREGHKGSMASVAF-HLNTQL--NNGESPKLFEGSE--- 205 (310)
T ss_dssp CSSHHHHHHHHHHHHHHHHGGG-CS---SCEEEEEECEEESSSCGGGGGGSCHHH-HHHHHH--HC--------------
T ss_pred CCChhHHHHHHHHHHHHHHHHH-cC---CCEEEEeCCcEECcCCCCCCccchHHH-HHHHHH--HcCCCcEEecCCC---
Confidence 54 2 3345566666665553 57 9999999999999986411 111111 111222 1356666777776
Q ss_pred c-ceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHH
Q 045430 164 G-YSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQ 242 (309)
Q Consensus 164 ~-~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+ .++++|++|+|++++.++.++. |++|||++++++|+.|+++.+++.+|.+ . +. ..+.+. .+
T Consensus 206 ~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~-~~--~~~~~~--~~--------- 268 (310)
T 1eq2_A 206 NFKRDFVYVGDVADVNLWFLENGV--SGIFNLGTGRAESFQAVADATLAYHKKG-Q-IE--YIPFPD--KL--------- 268 (310)
T ss_dssp --CBCEEEHHHHHHHHHHHHHHCC--CEEEEESCSCCBCHHHHHHHC---------------------------------
T ss_pred cceEccEEHHHHHHHHHHHHhcCC--CCeEEEeCCCccCHHHHHHHHHHHcCCC-C-ce--eCCCCh--hh---------
Confidence 6 6899999999999999887664 8999999999999999999999999976 2 10 011110 00
Q ss_pred HHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCC-CCcCChHHHHHHHHHHHHHC
Q 045430 243 IVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGF-LGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf-~p~~~~~~gl~~t~~~~r~~ 305 (309)
.... .....+|++|++++|| .|.++++++++++++||+++
T Consensus 269 --------~~~~---------------~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 269 --------KGRY---------------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp -----------C---------------CCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHTC--
T ss_pred --------hccc---------------ccccccchHHHHhcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 0000 1134689999999999 89999999999999999764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=246.71 Aligned_cols=234 Identities=11% Similarity=0.011 Sum_probs=167.7
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++.+++++|+.||.|++++|++. +++|||++||..+||.. ...|++|+.+
T Consensus 73 ~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~---------~~~~~~e~~~ 141 (338)
T 1udb_A 73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDN---------PKIPYVESFP 141 (338)
T ss_dssp TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSC---------CSSSBCTTSC
T ss_pred CCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccHHHhCCC---------CCCCcCcccC
Confidence 5899999998532 256778999999999999999886 68999999999999864 2568999987
Q ss_pred CCCc--c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--------chhHHHHHHHHHHHhHhCCcee
Q 045430 87 RLNV--T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--------MNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 87 ~~p~--p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--------~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
..|. + .+|...|.+++.++.+..+ ++++++||++||||.+... ...+. ..+..+....+.++.
T Consensus 142 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~---~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~ 216 (338)
T 1udb_A 142 TGTPQSPYGKSKLMVEQILTDLQKAQPD---WSIALLRYFNPVGAHPSGDMGEDPQGIPNNLM--PYIAQVAVGRRDSLA 216 (338)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHSTT---CEEEEEEECEEECCCTTSSSCCCCCSSCCSHH--HHHHHHHHTSSSCEE
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHhcCC---CceEEEeeceecCCCcccccccccccchhhHH--HHHHHHHHhcCCCcE
Confidence 6542 1 3345566666666553227 9999999999999954111 11111 112222222244555
Q ss_pred ecC------CccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCC
Q 045430 155 FPG------SKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGER 226 (309)
Q Consensus 155 ~~G------~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~ 226 (309)
+.| ++. +.++++||+|+|++++.++.++ ...+++|||++++++|+.|+.+.|++.+|.+.+.. ..|
T Consensus 217 ~~g~~~~~~~g~---~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~ 290 (338)
T 1udb_A 217 IFGNDYPTEDGT---GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYH---FAP 290 (338)
T ss_dssp EECSCSSSSSSS---CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEE---EEC
T ss_pred EecCcccCCCCc---eeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcce---eCC
Confidence 554 344 6789999999999999888653 22348999999999999999999999999653211 000
Q ss_pred CCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 227 VRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
. .++.. ....+|++|+++ +||+|+++++|+++++++||++.
T Consensus 291 --------~--------------~~~~~----------------~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~ 332 (338)
T 1udb_A 291 --------R--------------REGDL----------------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_dssp --------C--------------CTTCC----------------SBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred --------C--------------CCCch----------------hhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhc
Confidence 0 00111 134689999987 69999999999999999999875
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-31 Score=242.29 Aligned_cols=234 Identities=12% Similarity=0.053 Sum_probs=173.1
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++++++++|+.||.|++++|++.. +++||||+||..+||... . ...|++|++|
T Consensus 74 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~---~----~~~~~~E~~~ 145 (321)
T 2pk3_A 74 KPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSN-LDCRILTIGSSEEYGMIL---P----EESPVSEENQ 145 (321)
T ss_dssp CCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-CCCEEEEEEEGGGTBSCC---G----GGCSBCTTSC
T ss_pred CCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEccHHhcCCCC---C----CCCCCCCCCC
Confidence 4899999998532 3678899999999999999996642 589999999999998520 0 1458999987
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC--cchhHHHHHHHHHHHh-HhC--CceeecCC
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS--MMNVVGTLCVYAAICK-HEG--VPLLFPGS 158 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~--~~~~~~~~~i~~~l~~-~~g--~~~~~~G~ 158 (309)
..|. + .+|...|.+++.++.+ .+ ++++++||++||||+... .++. +...+.+ ..| .++...|+
T Consensus 146 ~~~~~~Y~~sK~~~E~~~~~~~~~-~g---i~~~ilrp~~v~g~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~ 216 (321)
T 2pk3_A 146 LRPMSPYGVSKASVGMLARQYVKA-YG---MDIIHTRTFNHIGPGQSLGFVTQD-----FAKQIVDIEMEKQEPIIKVGN 216 (321)
T ss_dssp CBCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEECTTCCTTSHHHH-----HHHHHHHHHTTSSCSEEEESC
T ss_pred CCCCCccHHHHHHHHHHHHHHHHH-cC---CCEEEEEeCcccCcCCCCCchHHH-----HHHHHHHHhcCCCCCeEEeCC
Confidence 6544 2 3355566666666553 57 999999999999998743 1111 1111111 115 46667777
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHH
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEG 238 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+. +.++++|++|+|++++.++..+ ..|++|||++|+.+|+.|+.+.|++.+|.+.... ..|. .
T Consensus 217 ~~---~~~~~v~v~Dva~a~~~~~~~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~---~~p~--------~-- 279 (321)
T 2pk3_A 217 LE---AVRDFTDVRDIVQAYWLLSQYG-KTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTE---LNPL--------Q-- 279 (321)
T ss_dssp SS---CEEEEEEHHHHHHHHHHHHHHC-CTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEE---ECGG--------G--
T ss_pred CC---cEEeeEEHHHHHHHHHHHHhCC-CCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCcee---eccc--------c--
Confidence 76 6789999999999999988765 4689999999999999999999999999754321 0110 0
Q ss_pred HHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 239 VWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
..+... .+..+|++|+++ +||+|+++++|+++++++||+++
T Consensus 280 ----------~~~~~~----------------~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 321 (321)
T 2pk3_A 280 ----------LRPSEV----------------PTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQA 321 (321)
T ss_dssp ----------CCSSCC----------------SBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHTC
T ss_pred ----------CCCccc----------------chhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhcC
Confidence 001111 245789999988 69999999999999999999864
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-31 Score=242.16 Aligned_cols=232 Identities=10% Similarity=-0.017 Sum_probs=171.6
Q ss_pred CCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
.++|+|||+|+... .++++++++|+.||.|++++|.+.. ..+||||+||..+||.. ...|++|++
T Consensus 74 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~---------~~~~~~E~~ 143 (336)
T 2hun_A 74 RKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDEVYGDI---------LKGSFTEND 143 (336)
T ss_dssp HTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCCC---------SSSCBCTTB
T ss_pred hCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHHHHCCC---------CCCCcCCCC
Confidence 46899999998532 2667799999999999999998873 24799999999999963 245899998
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcccc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCW 162 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~ 162 (309)
+..|. + .+|...|.++++++.+ .+ ++++++||++||||+.... . .... +...+ ..|.+++++|++.
T Consensus 144 ~~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~ilrp~~v~g~~~~~~-~-~~~~-~~~~~--~~~~~~~~~~~~~-- 212 (336)
T 2hun_A 144 RLMPSSPYSATKAASDMLVLGWTRT-YN---LNASITRCTNNYGPYQFPE-K-LIPK-TIIRA--SLGLKIPIYGTGK-- 212 (336)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-TT---CEEEEEEECEEESTTCCTT-S-HHHH-HHHHH--HTTCCEEEETC----
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHH-hC---CCEEEEeeeeeeCcCCCcC-c-hHHH-HHHHH--HcCCCceEeCCCC--
Confidence 76554 2 3455566777666654 57 9999999999999986321 1 1111 11122 2366778878877
Q ss_pred ccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHH
Q 045430 163 EGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQ 242 (309)
Q Consensus 163 ~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+.++++|++|+|++++.++..+ ..|++|||++|+++|+.|+++.|++.+|.+.+.. . +....
T Consensus 213 -~~~~~i~v~Dva~~~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~-----~-----~~~~~------ 274 (336)
T 2hun_A 213 -NVRDWLYVEDHVRAIELVLLKG-ESREIYNISAGEEKTNLEVVKIILRLMGKGEELI-----E-----LVEDR------ 274 (336)
T ss_dssp --CEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTE-----E-----EECCC------
T ss_pred -ceeeeEEHHHHHHHHHHHHhCC-CCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccc-----c-----ccCCC------
Confidence 6789999999999999888654 4689999999999999999999999999753211 0 00000
Q ss_pred HHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 243 IVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
++. ..+..+|++|+++ +||+|.++++++++++++||++.
T Consensus 275 --------~~~----------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 275 --------PGH----------------DLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp --------TTC----------------CCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred --------CCc----------------hhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 011 0134689999987 79999999999999999999875
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=251.05 Aligned_cols=249 Identities=10% Similarity=0.025 Sum_probs=172.3
Q ss_pred HhccCCCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 5 AKLSKLTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 5 ~~~~~~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
++++....+|+|||+|+... .++++++++|+.||.|++++|++. +++||||+||..+||.... +.......
T Consensus 86 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~iv~~SS~~v~g~~~~--~~~~~~~~ 161 (397)
T 1gy8_A 86 GVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIFSSSAAIFGNPTM--GSVSTNAE 161 (397)
T ss_dssp HHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGTBSCCC-------CCC
T ss_pred HHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh--CCCEEEEECCHHHhCCCCc--cccccccc
Confidence 34443323999999998532 266789999999999999999886 6899999999999986410 00000146
Q ss_pred CCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc-------chhHHHHHH---HHHHH
Q 045430 80 PFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM-------MNVVGTLCV---YAAIC 146 (309)
Q Consensus 80 p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~-------~~~~~~~~i---~~~l~ 146 (309)
|++|+++..|. + .+|...|.++..++.+ .+ ++++++||++||||++... ...+....+ ...+.
T Consensus 162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~-~g---i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
T 1gy8_A 162 PIDINAKKSPESPYGESKLIAERMIRDCAEA-YG---IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIA 237 (397)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHS
T ss_pred CcCccCCCCCCCchHHHHHHHHHHHHHHHHH-HC---CcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHH
Confidence 89999986554 2 3345566666666653 47 9999999999999974210 111111111 00211
Q ss_pred hHhC----------CceeecC------CccccccceeccCHHHHHHHHHHHhcCCCCC-----C---cceeecCCCcccH
Q 045430 147 KHEG----------VPLLFPG------SKDCWEGYSVASDADLIAEQHIWAAVDPYAR-----N---EAFNCSNGDVFKW 202 (309)
Q Consensus 147 ~~~g----------~~~~~~G------~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~-----g---~~fNI~~g~~~s~ 202 (309)
+... .+++++| ++. +.++++||+|+|++++.++..+... + ++|||++++++|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~ 314 (397)
T 1gy8_A 238 PDQRLTIHEDASTDKRMPIFGTDYPTPDGT---CVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSV 314 (397)
T ss_dssp CC-----------CCCEEEECSCSSSTTSS---CEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEH
T ss_pred hcCccccccccccCCCceeecCcccCCCCC---eeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccH
Confidence 1111 2566666 455 6799999999999999888654332 3 8999999999999
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh
Q 045430 203 KHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE 282 (309)
Q Consensus 203 ~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~ 282 (309)
.|+++.|++.+|.+.+.. ..| .. ++.. ....+|++|+++
T Consensus 315 ~e~~~~i~~~~g~~~~~~---~~~--------~~--------------~~~~----------------~~~~~d~~k~~~ 353 (397)
T 1gy8_A 315 REVIEVARKTTGHPIPVR---ECG--------RR--------------EGDP----------------AYLVAASDKARE 353 (397)
T ss_dssp HHHHHHHHHHHCCCCCEE---EEC--------CC--------------TTCC----------------SEECBCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCee---eCC--------CC--------------CCcc----------------cccccCHHHHHH
Confidence 999999999999753211 000 00 0110 134789999986
Q ss_pred -cCCCCcC-ChHHHHHHHHHHHHHC
Q 045430 283 -HGFLGFR-NSKNSFVNWIDKMKTY 305 (309)
Q Consensus 283 -lGf~p~~-~~~~gl~~t~~~~r~~ 305 (309)
|||+|++ +++++++++++||++.
T Consensus 354 ~lG~~p~~~~l~e~l~~~~~~~~~~ 378 (397)
T 1gy8_A 354 VLGWKPKYDTLEAIMETSWKFQRTH 378 (397)
T ss_dssp HTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HhCCCCCcCCHHHHHHHHHHHHHhc
Confidence 7999999 9999999999999876
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-31 Score=246.91 Aligned_cols=231 Identities=7% Similarity=-0.017 Sum_probs=171.6
Q ss_pred CCCccEEEEeeccc---CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS---RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 10 ~~~vd~V~H~A~~~---~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
..++|+|||+|+.. ..++++++++|+.||.|++++|++. +++ |||+||..+||.. ..|++|+++
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~--~~~-~V~~SS~~vyg~~----------~~~~~E~~~ 154 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK--KAK-VIYASSAGVYGNT----------KAPNVVGKN 154 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT--TCE-EEEEEEGGGGCSC----------CSSBCTTSC
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc--CCc-EEEeCcHHHhCCC----------CCCCCCCCC
Confidence 46899999999843 3478889999999999999999886 577 9999999999964 338999998
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc--hhHHHHHHHHHHHhHhCCceeecCCcccccc
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM--NVVGTLCVYAAICKHEGVPLLFPGSKDCWEG 164 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~--~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~ 164 (309)
..|. +.|+..|...|........ .++++++||++||||++.... ..+.. .+...+ ..|.++.++|++. +
T Consensus 155 ~~p~--~~Y~~sK~~~E~~~~~~~~-~~~~~~lR~~~v~Gp~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~g~---~ 225 (362)
T 3sxp_A 155 ESPE--NVYGFSKLCMDEFVLSHSN-DNVQVGLRYFNVYGPREFYKEKTASMVL-QLALGA--MAFKEVKLFEFGE---Q 225 (362)
T ss_dssp CCCS--SHHHHHHHHHHHHHHHTTT-TSCEEEEEECSEESTTCGGGGGGSCHHH-HHHHHH--HTTSEEECSGGGC---C
T ss_pred CCCC--ChhHHHHHHHHHHHHHHhc-cCCEEEEEeCceeCcCCCCCCcchhHHH-HHHHHH--HhCCCeEEECCCC---e
Confidence 6643 4577666665554322110 178999999999999874211 11111 111222 2467777778887 6
Q ss_pred ceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHH
Q 045430 165 YSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIV 244 (309)
Q Consensus 165 ~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
.++++|++|+|++++.++..+ ..| +|||++|+++|+.|+++.|++.+| +.... ..|.+. .
T Consensus 226 ~~~~i~v~Dva~ai~~~~~~~-~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~---~~~~~~----~---------- 285 (362)
T 3sxp_A 226 LRDFVYIEDVIQANVKAMKAQ-KSG-VYNVGYSQARSYNEIVSILKEHLG-DFKVT---YIKNPY----A---------- 285 (362)
T ss_dssp EEECEEHHHHHHHHHHHTTCS-SCE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEE---CCC------------------
T ss_pred EEccEEHHHHHHHHHHHHhcC-CCC-EEEeCCCCCccHHHHHHHHHHHcC-CCceE---ECCCCC----c----------
Confidence 799999999999999988765 456 999999999999999999999999 43311 111110 0
Q ss_pred HHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 245 KENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.. ..+..+|++|+++ +||+|.++++++++++++||++.
T Consensus 286 -------~~----------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 324 (362)
T 3sxp_A 286 -------FF----------------QKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI 324 (362)
T ss_dssp --------------------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred -------Cc----------------ccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 00 1245799999976 79999999999999999999764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=242.76 Aligned_cols=234 Identities=11% Similarity=-0.015 Sum_probs=171.4
Q ss_pred CccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCC-ceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNL-RHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 12 ~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v-~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
++|+|||+|+.. ..++.+++++|+.||.|++++|++. ++ +||||+||..+||.. ...|++|++
T Consensus 86 ~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~v~~SS~~v~g~~---------~~~~~~E~~ 154 (335)
T 1rpn_A 86 QPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF--SPETRFYQASTSEMFGLI---------QAERQDENT 154 (335)
T ss_dssp CCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH--CTTSEEEEEEEGGGGCSC---------SSSSBCTTS
T ss_pred CCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEEeCHHHhCCC---------CCCCCCccc
Confidence 479999999843 2367789999999999999999887 55 899999999999964 245899999
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCC-ceeecCCcc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGV-PLLFPGSKD 160 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~-~~~~~G~~~ 160 (309)
+..|. + .+|...|.++++++.+ .+ ++++++||++||||+... ...... ..++..+ ..|. +....|++.
T Consensus 155 ~~~p~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~i~r~~~v~Gp~~~~~~~~~~~-~~~~~~~--~~g~~~~~~~g~g~ 227 (335)
T 1rpn_A 155 PFYPRSPYGVAKLYGHWITVNYRES-FG---LHASSGILFNHESPLRGIEFVTRKV-TDAVARI--KLGKQQELRLGNVD 227 (335)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECCEECTTSCTTSHHHHH-HHHHHHH--HTTSCSCEEESCTT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHH-cC---CcEEEEeeCcccCCCCCCCcchHHH-HHHHHHH--HcCCCceEEeCCCc
Confidence 87654 2 3455566666666653 57 999999999999998643 321111 1111122 1344 333467776
Q ss_pred ccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHH
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+.++++|++|+|++++.++.++. +++|||++++++|+.|+++.|++.+|.+.... .++.. .
T Consensus 228 ---~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~----~~~~~---~------- 288 (335)
T 1rpn_A 228 ---AKRDWGFAGDYVEAMWLMLQQDK--ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDF----LKIDP---A------- 288 (335)
T ss_dssp ---CEEECEEHHHHHHHHHHHHHSSS--CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGT----EEECG---G-------
T ss_pred ---ceeceEEHHHHHHHHHHHHhcCC--CCEEEEeCCCCccHHHHHHHHHHHhCCCcccc----ccccc---c-------
Confidence 67999999999999999987653 58999999999999999999999999753211 11100 0
Q ss_pred HHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
...+... ....+|++|+++ +||+|+++++|+++++++||++.
T Consensus 289 -------~~~~~~~----------------~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 331 (335)
T 1rpn_A 289 -------FFRPAEV----------------DVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRR 331 (335)
T ss_dssp -------GCCSSCC----------------CBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred -------ccCCCcc----------------hhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence 0001111 135689999987 79999999999999999999763
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=244.74 Aligned_cols=248 Identities=12% Similarity=0.047 Sum_probs=172.6
Q ss_pred CCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+... .++.+++++|+.||.|++++|++. + +||||+||..+||.. ...|++|++
T Consensus 66 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~v~~SS~~v~g~~---------~~~~~~e~~ 133 (345)
T 2bll_A 66 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY--R-KRIIFPSTSEVYGMC---------SDKYFDEDH 133 (345)
T ss_dssp HHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT--T-CEEEEECCGGGGBTC---------CCSSBCTTT
T ss_pred cCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh--C-CeEEEEecHHHcCCC---------CCCCcCCcc
Confidence 36899999998543 266778999999999999999886 5 899999999999964 245788887
Q ss_pred CCC---C--ccc-----chHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc------hhHHHHHHHHHHHhHh
Q 045430 86 PRL---N--VTN-----FYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM------NVVGTLCVYAAICKHE 149 (309)
Q Consensus 86 p~~---p--~p~-----~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~------~~~~~~~i~~~l~~~~ 149 (309)
+.. | .|. +|...|.++++++.+ .+ ++++++||++||||+..... ...... +...+ ..
T Consensus 134 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~--~~ 206 (345)
T 2bll_A 134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK-EG---LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQ-LILNL--VE 206 (345)
T ss_dssp CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECSEECSSCCCTTCSBSCBCHHHHH-HHHHH--HH
T ss_pred cccccCcccCcccccHHHHHHHHHHHHHHHHh-cC---CCEEEEcCCcccCCCcccccccccccccHHHH-HHHHH--Hc
Confidence 642 2 122 234456666665553 57 99999999999999864210 111111 11122 23
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC-cccHHHHHHHHHHHhccccCCCCCCCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD-VFKWKHLWKVLAEQFEIENYGLPQDGER 226 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~-~~s~~el~~~i~~~~G~~~~~~~~~~~~ 226 (309)
|.++.++|++. +.++++|++|+|++++.++.++. ..|++|||++++ .+|+.|+++.|++.+|.+..... .|
T Consensus 207 ~~~~~~~~~g~---~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~---~~ 280 (345)
T 2bll_A 207 GSPIKLIDGGK---QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH---FP 280 (345)
T ss_dssp TCCEEEGGGSC---CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGG---SC
T ss_pred CCCcEEECCCC---EEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCccccc---Cc
Confidence 67777778776 67899999999999999987653 568999999996 89999999999999997643211 11
Q ss_pred CCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 227 VRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.............+ +..... ..+..+|++|+++ |||+|++++++|++++++||++.
T Consensus 281 ~~~~~~~~~~~~~~-------~~~~~~----------------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~ 337 (345)
T 2bll_A 281 PFAGFRVVESSSYY-------GKGYQD----------------VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337 (345)
T ss_dssp CCCCEEEC-----------------------------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhc-------cccccc----------------hhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHc
Confidence 11000000000000 000000 1245789999987 79999999999999999999875
Q ss_pred C
Q 045430 306 R 306 (309)
Q Consensus 306 ~ 306 (309)
.
T Consensus 338 ~ 338 (345)
T 2bll_A 338 V 338 (345)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=244.15 Aligned_cols=232 Identities=9% Similarity=0.069 Sum_probs=171.7
Q ss_pred CccEEEEeeccc---CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS---RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 12 ~vd~V~H~A~~~---~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
++|+|||+|+.. ..++++++++|+.||.|++++|.+. ++ ||||+||..+||.. ...|++|+++..
T Consensus 115 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~-r~V~~SS~~v~g~~---------~~~~~~E~~~~~ 182 (357)
T 2x6t_A 115 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGR---------TSDFIESREYEK 182 (357)
T ss_dssp SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGCSC---------SSCCCSSGGGCC
T ss_pred CCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEcchHHhCCC---------CCCCcCCcCCCC
Confidence 699999999843 2377889999999999999999986 67 99999999999863 245899998766
Q ss_pred Cc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--chhHHHHHHHHHHHhHhCCceeecCCccccc
Q 045430 89 NV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--MNVVGTLCVYAAICKHEGVPLLFPGSKDCWE 163 (309)
Q Consensus 89 p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~ 163 (309)
|. + .+|+..|.++.+++.+ .+ ++++++||++||||++... ...... .+...+ ..|.++.++|++.
T Consensus 183 p~~~Y~~sK~~~E~~~~~~~~~-~g---~~~~ilRp~~v~Gp~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~--- 252 (357)
T 2x6t_A 183 PLNVFGYSKFLFDEYVRQILPE-AN---SQIVGFRYFNVYGPREGHKGSMASVAF-HLNTQL--NNGESPKLFEGSE--- 252 (357)
T ss_dssp CSSHHHHHHHHHHHHHHHHGGG-CS---SCEEEEEECEEESSSCTTCGGGSCHHH-HHHHHH--HTTCCCEEETTGG---
T ss_pred CCChhHHHHHHHHHHHHHHHHH-cC---CCEEEEecCeEECCCCCCCcccchHHH-HHHHHH--HcCCCcEEeCCCC---
Confidence 54 2 3345566666665553 57 9999999999999986421 111111 111222 2366677778876
Q ss_pred c-ceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHH
Q 045430 164 G-YSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQ 242 (309)
Q Consensus 164 ~-~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+ .++++|++|+|++++.++.++. |++|||++|+.+|+.|+++.|++.+|.+ . +. ..+.+. .+.
T Consensus 253 ~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~-~~--~~~~~~--~~~-------- 316 (357)
T 2x6t_A 253 NFKRDFVYVGDVADVNLWFLENGV--SGIFNLGTGRAESFQAVADATLAYHKKG-Q-IE--YIPFPD--KLK-------- 316 (357)
T ss_dssp GCEECEEEHHHHHHHHHHHHHHCC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-C-CE--EECCCG--GGT--------
T ss_pred cceEccEEHHHHHHHHHHHHhcCC--CCeEEecCCCcccHHHHHHHHHHHcCCC-C-ce--ecCCCc--ccc--------
Confidence 6 6899999999999999887654 8999999999999999999999999976 2 10 011111 000
Q ss_pred HHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCC-CCcCChHHHHHHHHHHHHHC
Q 045430 243 IVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGF-LGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf-~p~~~~~~gl~~t~~~~r~~ 305 (309)
... .....+|++|++++|| .|.++++|+++++++||+++
T Consensus 317 ---------~~~---------------~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 317 ---------GRY---------------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD 356 (357)
T ss_dssp ---------TSC---------------CSBCCCCCHHHHHTTCCCCCCCHHHHHHHHHHHHC--
T ss_pred ---------ccc---------------ccccccCHHHHHHcCCCCCCCCHHHHHHHHHHHHhhc
Confidence 000 1135689999999999 89999999999999999763
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=238.60 Aligned_cols=231 Identities=9% Similarity=-0.034 Sum_probs=167.1
Q ss_pred CccEEEEeecccC----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 12 ~vd~V~H~A~~~~----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
++|+|||+|+... .++++++++|+.||.|++++|++. +++||||+||..+||.. . ...+.+|+.|.
T Consensus 68 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~----~----~~~~~~e~~~~ 137 (312)
T 2yy7_A 68 KITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK--KIKKIFWPSSIAVFGPT----T----PKENTPQYTIM 137 (312)
T ss_dssp TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT--SCSEEECCEEGGGCCTT----S----CSSSBCSSCBC
T ss_pred CCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHHhCCC----C----CCCCccccCcC
Confidence 7899999998432 367789999999999999999986 68999999999999863 0 24578898876
Q ss_pred CCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC--C-cchhHHHHHHHHHHHhHhCCceeecCCccc
Q 045430 88 LNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY--S-MMNVVGTLCVYAAICKHEGVPLLFPGSKDC 161 (309)
Q Consensus 88 ~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~--~-~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~ 161 (309)
.|. + .+|...|.++.+++.+ .+ ++++++||++||||+.. . ....+. ..+... ..+.+++.+|++.
T Consensus 138 ~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~lrp~~v~g~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~- 208 (312)
T 2yy7_A 138 EPSTVYGISKQAGERWCEYYHNI-YG---VDVRSIRYPGLISWSTPPGGGTTDYAV--DIFYKA--IADKKYECFLSSE- 208 (312)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHH-HC---CEEECEEECEEECSSSCCCSCTTTHHH--HHHHHH--HHTSEEEESSCTT-
T ss_pred CCCchhHHHHHHHHHHHHHHHHh-cC---CcEEEEeCCeEecCCCCCCCchhhhHH--HHHHHH--HcCCCeEEecCCC-
Confidence 554 2 3455566666666553 57 99999999999997632 1 111111 122221 1234566677776
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCC---CCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHH
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYA---RNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEG 238 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a---~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+.++++|++|+|++++.++.++.. .|++|||++ +.+|+.|+++.|++.+|...... .|. ...
T Consensus 209 --~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~~i~~----~~~--------~~~ 273 (312)
T 2yy7_A 209 --TKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFTITY----EPD--------FRQ 273 (312)
T ss_dssp --CCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTTCEEEE----CCC--------THH
T ss_pred --ceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCCCceEe----ccC--------ccc
Confidence 679999999999999999887643 258999996 88999999999999998311100 110 000
Q ss_pred HHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHH
Q 045430 239 VWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMK 303 (309)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r 303 (309)
.+ . ...+..+|++|+++ +||+|+++++||++++++|||
T Consensus 274 ---~~-----------~-------------~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 274 ---KI-----------A-------------DSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp ---HH-----------H-------------TTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred ---cc-----------c-------------ccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 00 0 01134789999987 799999999999999999985
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=243.29 Aligned_cols=234 Identities=13% Similarity=-0.023 Sum_probs=165.7
Q ss_pred CCCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCC-
Q 045430 9 KLTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFT- 82 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~- 82 (309)
.++++|+|||+|+... .++.+++++|+.||.|++++|++. ++++||||+||..+||.. ...|++
T Consensus 96 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~V~~SS~~vyg~~---------~~~~~~~ 165 (377)
T 2q1s_A 96 LQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHF-KRLKKVVYSAAGCSIAEK---------TFDDAKA 165 (377)
T ss_dssp CCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTC-SSCCEEEEEEEC----------------------
T ss_pred HhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCCHHHcCCC---------CCCCcCc
Confidence 3458999999998542 267789999999999999999875 258999999999999964 245788
Q ss_pred -CCC---CC-CCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccC---------CCc--chhHHHHHHHH
Q 045430 83 -EDL---PR-LNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSP---------YSM--MNVVGTLCVYA 143 (309)
Q Consensus 83 -E~~---p~-~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~---------~~~--~~~~~~~~i~~ 143 (309)
|++ |. .|. + .+|...|.++++++.+ .+ ++++++||++||||+. ... +..... .+..
T Consensus 166 ~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g---i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~-~~~~ 240 (377)
T 2q1s_A 166 TEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQ-HQ---LPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTP-TFIY 240 (377)
T ss_dssp -CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHH-HHHH
T ss_pred ccccccccccCCCCchHHHHHHHHHHHHHHHHH-hC---CCEEEEeeccEECCCCcccccccccCcccccccHHH-HHHH
Confidence 887 54 433 2 3455567777666653 47 9999999999999986 210 011111 1111
Q ss_pred HHHhHhCCceeecCCccccccceeccCHHHHHHH-HHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCC
Q 045430 144 AICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQ-HIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQ 222 (309)
Q Consensus 144 ~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a-~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~ 222 (309)
.+ ..|.++.++|++. +.++++|++|+|++ ++.++..+. .| +|||++++++|+.|+++.|++.+|.+....
T Consensus 241 ~~--~~g~~~~~~g~g~---~~~~~i~v~Dva~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-- 311 (377)
T 2q1s_A 241 KA--LKGMPLPLENGGV---ATRDFIFVEDVANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNTELD-- 311 (377)
T ss_dssp HH--HTTCCCCCSGGGC---CEECCEEHHHHHHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCC--
T ss_pred HH--HcCCCeEEeCCCC---eEEeeEEHHHHHHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCce--
Confidence 22 2366777788877 67999999999999 988887754 67 999999999999999999999999764321
Q ss_pred CCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhccc-ccccChhhHHh-cCCCCcCChHHHHHHHHH
Q 045430 223 DGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGF-LLLDSMNKSKE-HGFLGFRNSKNSFVNWID 300 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~ 300 (309)
..|.. +... . +..+|++|+++ +||+|.++++|+++++++
T Consensus 312 -~~p~~----------------------~~~~----------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~ 352 (377)
T 2q1s_A 312 -RLPKR----------------------PWDN----------------SGKRFGSPEKARRELGFSADVSIDDGLRKTIE 352 (377)
T ss_dssp -CCCCC----------------------GGGC----------------C-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHH
T ss_pred -eCCCC----------------------cccc----------------ccccccCHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 11210 0110 1 45789999986 799999999999999999
Q ss_pred HHHHC
Q 045430 301 KMKTY 305 (309)
Q Consensus 301 ~~r~~ 305 (309)
||+++
T Consensus 353 ~~~~~ 357 (377)
T 2q1s_A 353 WTKAN 357 (377)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99874
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-30 Score=237.30 Aligned_cols=231 Identities=13% Similarity=0.034 Sum_probs=168.8
Q ss_pred CCCccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
+.++|+|||+|+.. ..++.+++++|+.||.|++++|++. ++ ||||+||..+||.. ...|++|+
T Consensus 89 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g~~---------~~~~~~E~ 156 (343)
T 2b69_A 89 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV--GA-RLLLASTSEVYGDP---------EVHPQSED 156 (343)
T ss_dssp CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH--TC-EEEEEEEGGGGBSC---------SSSSBCTT
T ss_pred hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh--CC-cEEEECcHHHhCCC---------CCCCCccc
Confidence 45799999999843 2367788999999999999999887 55 99999999999864 24578888
Q ss_pred C-----CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 85 L-----PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 85 ~-----p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
. |..|. + .+|...|.++.+++.+ .+ ++++++||++||||+........... ++..+ ..|.++.++
T Consensus 157 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~ilrp~~v~G~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ 229 (343)
T 2b69_A 157 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQ-EG---VEVRVARIFNTFGPRMHMNDGRVVSN-FILQA--LQGEPLTVY 229 (343)
T ss_dssp CCCBCCSSSTTHHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECCEECTTCCTTCCCHHHH-HHHHH--HHTCCEEEE
T ss_pred ccccCCCCCCCCchHHHHHHHHHHHHHHHHH-hC---CcEEEEEEcceeCcCCCCCcccHHHH-HHHHH--HcCCCceEc
Confidence 4 32222 1 2344456666665553 57 99999999999999763211111111 11121 236677777
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++. +.++++|++|+|++++.++..+ .+++|||++++++|+.|+++.|++.+|.+.... ..|..
T Consensus 230 ~~~~---~~~~~v~v~Dva~a~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~---~~p~~-------- 293 (343)
T 2b69_A 230 GSGS---QTRAFQYVSDLVNGLVALMNSN--VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ---FLSEA-------- 293 (343)
T ss_dssp SSSC---CEEECEEHHHHHHHHHHHHTSS--CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEE---EECCC--------
T ss_pred CCCC---eEEeeEeHHHHHHHHHHHHhcC--CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCce---eCCCC--------
Confidence 8877 6789999999999999888654 378999999999999999999999999764321 01100
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
...+ ....+|++|+++ +||+|.++++|+++++++||++.
T Consensus 294 -------------~~~~-----------------~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 333 (343)
T 2b69_A 294 -------------QDDP-----------------QKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 333 (343)
T ss_dssp -------------TTCC-----------------CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred -------------CCCC-----------------ceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 0011 134689999987 79999999999999999999863
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=239.86 Aligned_cols=237 Identities=9% Similarity=-0.032 Sum_probs=172.8
Q ss_pred CCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCcc-cc--CCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFE-SF--GKIRPHDTPFT 82 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~-~~--~~~~~~~~p~~ 82 (309)
+++|+|||+|+... .++++++++|+.||.|++++|.+. ++ ||||+||..+||.... .. ........|++
T Consensus 74 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~ 150 (348)
T 1oc2_A 74 AKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY--DI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFT 150 (348)
T ss_dssp TTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH--TC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBC
T ss_pred hcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh--CC-eEEEecccceeCCCcccccccccccccCCCcC
Confidence 45699999998542 266778999999999999999987 56 9999999999985300 00 00000126899
Q ss_pred CCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC--cchhHHHHHHHHHHHhHhCCceeecC
Q 045430 83 EDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS--MMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 83 E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~--~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
|++|..|. + .+|+..|.++..++.+ .+ ++++++||++||||+... .... +...+ ..|.+++++|
T Consensus 151 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~g---i~~~ilrp~~v~G~~~~~~~~~~~-----~~~~~--~~~~~~~~~~ 219 (348)
T 1oc2_A 151 AETNYNPSSPYSSTKAASDLIVKAWVRS-FG---VKATISNCSNNYGPYQHIEKFIPR-----QITNI--LAGIKPKLYG 219 (348)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEESTTCCTTSHHHH-----HHHHH--HHTCCCEEET
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHHHH-hC---CCEEEEeeceeeCCCCCccchHHH-----HHHHH--HcCCCceEec
Confidence 99876554 2 3455567777666653 57 999999999999998742 2111 11122 1366777778
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccH
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKE 237 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
++. +.++++|++|+|++++.++..+ ..|++|||++|+++|+.|+.+.|++.+|.+.+.. + +....
T Consensus 220 ~~~---~~~~~i~v~Dva~~~~~~~~~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-----~-----~~~~~- 284 (348)
T 1oc2_A 220 EGK---NVRDWIHTNDHSTGVWAILTKG-RMGETYLIGADGEKNNKEVLELILEKMGQPKDAY-----D-----HVTDR- 284 (348)
T ss_dssp TSC---CEEECEEHHHHHHHHHHHHHHC-CTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCS-----E-----EECCC-
T ss_pred CCC---ceEeeEEHHHHHHHHHHHhhCC-CCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcccc-----c-----cCCCC-
Confidence 776 6789999999999999888654 4689999999999999999999999999764321 0 01000
Q ss_pred HHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCC-hHHHHHHHHHHHHHC
Q 045430 238 GVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRN-SKNSFVNWIDKMKTY 305 (309)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~-~~~gl~~t~~~~r~~ 305 (309)
+.. ..+..+|++|+++ +||+|+++ ++++++++++||++.
T Consensus 285 -------------~~~----------------~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 285 -------------AGH----------------DLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 325 (348)
T ss_dssp -------------TTC----------------CCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred -------------CCc----------------ccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence 000 0134689999987 79999998 999999999999875
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=236.19 Aligned_cols=237 Identities=10% Similarity=0.053 Sum_probs=173.8
Q ss_pred CccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+.. ..++++++++|+.||.|++++|++. ++ ||||+||..+||.. ...|++|+++
T Consensus 54 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~vy~~~---------~~~~~~E~~~ 121 (299)
T 1n2s_A 54 RPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET--GA-WVVHYSTDYVFPGT---------GDIPWQETDA 121 (299)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT--TC-EEEEEEEGGGSCCC---------TTCCBCTTSC
T ss_pred CCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc--CC-cEEEEecccEEeCC---------CCCCCCCCCC
Confidence 489999999843 2477889999999999999999986 56 89999999999964 2568999988
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
..| .+.|+..|...|...+... .+++++||++||||++.+..... ...+ ..|.++.+.|+ +.+
T Consensus 122 ~~p--~~~Y~~sK~~~E~~~~~~~---~~~~ilRp~~v~G~~~~~~~~~~-----~~~~--~~~~~~~~~~~-----~~~ 184 (299)
T 1n2s_A 122 TSP--LNVYGKTKLAGEKALQDNC---PKHLIFRTSWVYAGKGNNFAKTM-----LRLA--KERQTLSVIND-----QYG 184 (299)
T ss_dssp CCC--SSHHHHHHHHHHHHHHHHC---SSEEEEEECSEECSSSCCHHHHH-----HHHH--HHCSEEEEECS-----CEE
T ss_pred CCC--ccHHHHHHHHHHHHHHHhC---CCeEEEeeeeecCCCcCcHHHHH-----HHHH--hcCCCEEeecC-----ccc
Confidence 654 4468888777776553345 68999999999999875433221 1122 13667777776 558
Q ss_pred eccCHHHHHHHHHHHhcCC--CC-CCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHH
Q 045430 167 VASDADLIAEQHIWAAVDP--YA-RNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQI 243 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~--~a-~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
+++|++|+|++++.++.++ .. .|++|||++++.+|+.|+.+.+++.+|.+....+ .+ ....+.. ..|
T Consensus 185 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~---~~--~~~~~~~--~~~--- 254 (299)
T 1n2s_A 185 APTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLA---LT--ELNAVPT--SAY--- 254 (299)
T ss_dssp CCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCC---CC--EEEEECS--TTS---
T ss_pred CCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccc---cc--ccccccc--ccc---
Confidence 9999999999999988765 23 4899999999999999999999999997743210 00 0000000 000
Q ss_pred HHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHCCCC
Q 045430 244 VKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTYRIV 308 (309)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~~~i 308 (309)
...... ..+..+|++|+++ +||+|+ +++|+++++++||++.+-|
T Consensus 255 ----~~~~~~----------------~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~~i 299 (299)
T 1n2s_A 255 ----PTPASR----------------PGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTTTTI 299 (299)
T ss_dssp ----CCSSCC----------------CSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSCCC-
T ss_pred ----cCcCCC----------------CCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Confidence 000000 1256899999997 699998 8999999999999987754
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=239.67 Aligned_cols=247 Identities=11% Similarity=-0.019 Sum_probs=174.6
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCc-------eEEEEeCCccccCCcc--ccCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLR-------HVCLQTGGKHYVGPFE--SFGKIRPH 77 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~-------r~v~~Ss~~vYG~~~~--~~~~~~~~ 77 (309)
++|+|||+|+... .++++++++|+.||.|++++|.+...+++ ||||+||.++||.... .... ...
T Consensus 73 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~-~~~ 151 (361)
T 1kew_A 73 QPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN-SVT 151 (361)
T ss_dssp CCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT-TSC
T ss_pred CCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccc-ccc
Confidence 6899999998543 26678999999999999999987522466 9999999999985300 0000 000
Q ss_pred CCCCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
..|++|++|..|. + .+|...|.+++.++.+ .+ ++++++||++||||+.... .. .. .+...+ ..|.+++
T Consensus 152 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~g---i~~~~vrp~~v~G~~~~~~-~~-~~-~~~~~~--~~~~~~~ 222 (361)
T 1kew_A 152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRT-YG---LPTIVTNCSNNYGPYHFPE-KL-IP-LVILNA--LEGKPLP 222 (361)
T ss_dssp CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECEEESTTCCTT-SH-HH-HHHHHH--HHTCCEE
T ss_pred CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH-hC---CcEEEEeeceeECCCCCcc-cH-HH-HHHHHH--HcCCCce
Confidence 1279999876544 2 3455566666666653 57 9999999999999986421 11 10 111122 1366777
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHh
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMR 234 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~ 234 (309)
++|++. +.++++|++|+|+++++++..+ ..|++|||++|+++|+.|+.+.|++.+|.+.+.. .| ....+.
T Consensus 223 ~~~~~~---~~~~~i~v~Dva~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~----~p--~~~~~~ 292 (361)
T 1kew_A 223 IYGKGD---QIRDWLYVEDHARALHMVVTEG-KAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKA----TS--YREQIT 292 (361)
T ss_dssp EETTSC---CEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCS----SC--GGGGEE
T ss_pred EcCCCc---eeEeeEEHHHHHHHHHHHHhCC-CCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccc----cc--ccccee
Confidence 778877 6789999999999999988654 4689999999999999999999999999764422 11 100000
Q ss_pred ccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 235 GKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
. + +.... . ..+..+|++|+++ +||+|+++++++++++++||++.
T Consensus 293 ~-------------~-~~~~~----~---------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 293 Y-------------V-ADRPG----H---------DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp E-------------E-CCCTT----C---------CCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred e-------------c-CCCCc----c---------cceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence 0 0 00000 0 1245789999987 79999999999999999999875
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-30 Score=241.97 Aligned_cols=232 Identities=11% Similarity=0.026 Sum_probs=164.3
Q ss_pred CccEEEEeecccC-----CChH---HHHHhHHHHHHHHHHHhCcCCCCC-ceEEEEeCCccccCCccccCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEA---ENCEVNGAMLRNVLRSVIPNAPNL-RHVCLQTGGKHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~---~~~~vNv~gt~nll~a~~~~~~~v-~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~ 82 (309)
++|+|||+|+... .+++ +++++|+.||.|++++|++. ++ +|||++||.++||.. ..|++
T Consensus 100 ~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~~~V~~SS~~vyg~~----------~~~~~ 167 (404)
T 1i24_A 100 EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF--GEECHLVKLGTMGEYGTP----------NIDIE 167 (404)
T ss_dssp CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEECCGGGGCCC----------SSCBC
T ss_pred CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh--CCCcEEEEeCcHHHhCCC----------CCCCC
Confidence 3899999998432 2333 37799999999999999886 46 699999999999963 34677
Q ss_pred CC--------------CCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc-------------
Q 045430 83 ED--------------LPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM------------- 132 (309)
Q Consensus 83 E~--------------~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~------------- 132 (309)
|+ .+..|. + .+|+..|.++.+++.. .+ ++++++||++||||++...
T Consensus 168 E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~g---i~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~ 243 (404)
T 1i24_A 168 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA-WG---IRATDLNQGVVYGVKTDETEMHEELRNRLDYD 243 (404)
T ss_dssp SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred ccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHh-cC---CeEEEEecceeeCCCCCccccccccccccccc
Confidence 75 233322 1 2344455555555543 47 9999999999999986310
Q ss_pred --chhHHHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCC--cceeecCCCcccHHHHHHH
Q 045430 133 --MNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARN--EAFNCSNGDVFKWKHLWKV 208 (309)
Q Consensus 133 --~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g--~~fNI~~g~~~s~~el~~~ 208 (309)
+...... +...+ ..|.++.++|++. +.++++||+|+|+++++++.++.+.| ++|||++ +++|+.|+++.
T Consensus 244 ~~~~~~~~~-~~~~~--~~g~~~~~~g~g~---~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~ 316 (404)
T 1i24_A 244 AVFGTALNR-FCVQA--AVGHPLTVYGKGG---QTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASL 316 (404)
T ss_dssp TTTCCHHHH-HHHHH--HHTCCEEEETTSC---CEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHH
T ss_pred cchhhHHHH-HHHHH--HcCCeeEEeCCCC---ceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHH
Confidence 0111111 11122 2367777778877 67999999999999999998766567 7999998 88999999999
Q ss_pred HHHH---hccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCC
Q 045430 209 LAEQ---FEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGF 285 (309)
Q Consensus 209 i~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf 285 (309)
|++. +|.+.... ..|.+. .... .....+|++|++++||
T Consensus 317 i~~~~~~~g~~~~~~---~~p~~~----------------------~~~~--------------~~~~~~d~~k~~~LG~ 357 (404)
T 1i24_A 317 VTKAGSKLGLDVKKM---TVPNPR----------------------VEAE--------------EHYYNAKHTKLMELGL 357 (404)
T ss_dssp HHHHHHTTTCCCCEE---EECCSS----------------------CSCS--------------SCCCCBCCCHHHHTTC
T ss_pred HHHHHHhhCCCcccc---ccCccc----------------------Cccc--------------cceEecCHHHHHHcCC
Confidence 9998 66543211 011100 0000 0134689999998999
Q ss_pred CCcCChHHHHHHHHHHHHHC
Q 045430 286 LGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 286 ~p~~~~~~gl~~t~~~~r~~ 305 (309)
+|+++++++++++++|++..
T Consensus 358 ~p~~~~~~~l~~~~~~~~~~ 377 (404)
T 1i24_A 358 EPHYLSDSLLDSLLNFAVQF 377 (404)
T ss_dssp CCCCCCHHHHHHHHHHHHHT
T ss_pred CcCcCHHHHHHHHHHHHHhh
Confidence 99999999999999998653
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-30 Score=240.48 Aligned_cols=235 Identities=11% Similarity=-0.037 Sum_probs=170.7
Q ss_pred CCccEEEEeeccc------CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS------RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 11 ~~vd~V~H~A~~~------~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
+++|+|||+|+.. ..++++++++|+.||.|++++|++. +++||||+||..+||..... . ....|++|+
T Consensus 92 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~~V~~SS~~v~~~~~~~-~---~~~~~~~E~ 165 (379)
T 2c5a_A 92 EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQL-E---TTNVSLKES 165 (379)
T ss_dssp TTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSS-S---SSSCEECGG
T ss_pred CCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeehheeCCCCCC-C---ccCCCcCcc
Confidence 4789999999843 3467889999999999999999886 68999999999999853100 0 012468888
Q ss_pred C--CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchh--HHHHHHHHHHHhHhCCc-eeec
Q 045430 85 L--PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNV--VGTLCVYAAICKHEGVP-LLFP 156 (309)
Q Consensus 85 ~--p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~--~~~~~i~~~l~~~~g~~-~~~~ 156 (309)
+ +..|. + .+|...|.++++++.+ .+ ++++++||++||||++...... ... .++..+. .+.+ ++++
T Consensus 166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g---i~~~ilrp~~v~G~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~ 238 (379)
T 2c5a_A 166 DAWPAEPQDAFGLEKLATEELCKHYNKD-FG---IECRIGRFHNIYGPFGTWKGGREKAPA-AFCRKAQ--TSTDRFEMW 238 (379)
T ss_dssp GGSSBCCSSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEECTTSCCSSSCCCHHH-HHHHHHH--HCSSCEEEE
T ss_pred cCCCCCCCChhHHHHHHHHHHHHHHHHH-HC---CCEEEEEeCceeCcCCCcccccccHHH-HHHHHHH--hCCCceEEe
Confidence 7 33322 1 2344556666666553 57 9999999999999976421110 111 1111221 3555 7778
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++. +.++++|++|+|++++.++.++ .+++|||++++.+|+.|+++.|++.+|.+.... ..|.+
T Consensus 239 g~g~---~~~~~i~v~Dva~ai~~~l~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~---~~p~~-------- 302 (379)
T 2c5a_A 239 GDGL---QTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH---HIPGP-------- 302 (379)
T ss_dssp SCSC---CEECCEEHHHHHHHHHHHHHSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE---EECCC--------
T ss_pred CCCC---eeEEEEEHHHHHHHHHHHhhcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCCcee---eCCCC--------
Confidence 8877 6789999999999999988765 578999999999999999999999999764321 01110
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.+. ....+|++|+++ +||+|+++++++++++++||++.
T Consensus 303 --------------~~~-----------------~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 341 (379)
T 2c5a_A 303 --------------EGV-----------------RGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 341 (379)
T ss_dssp --------------CCC-----------------SBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred --------------CCc-----------------ccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 000 134689999987 69999999999999999999863
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-30 Score=236.79 Aligned_cols=242 Identities=13% Similarity=0.075 Sum_probs=169.4
Q ss_pred ccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCc-eEEEEeCCccccCCcccc-CC----C--CCCCC
Q 045430 13 VTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLR-HVCLQTGGKHYVGPFESF-GK----I--RPHDT 79 (309)
Q Consensus 13 vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~-r~v~~Ss~~vYG~~~~~~-~~----~--~~~~~ 79 (309)
+|+|||+|+... .++++++++|+.||.|++++|.+. +++ ||||+||..+||...... .+ . .....
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~--~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~ 151 (347)
T 1orr_A 74 PDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY--NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPN 151 (347)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTT
T ss_pred CCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCceEEEeccHHHhCCCCcCCccccccccccccccc
Confidence 899999998532 267788999999999999999987 565 999999999998631000 00 0 00012
Q ss_pred CCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc-chhHHHHHHHHHHHhHh-C--Cc
Q 045430 80 PFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM-MNVVGTLCVYAAICKHE-G--VP 152 (309)
Q Consensus 80 p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~~~~i~~~l~~~~-g--~~ 152 (309)
+++|+.+..|. + .+|...|.++++++.+ .+ ++++++||++||||+.... ........+. .+.+.. + .+
T Consensus 152 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g---i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 226 (347)
T 1orr_A 152 GYDESTQLDFHSPYGCSKGAADQYMLDYARI-FG---LNTVVFRHSSMYGGRQFATYDQGWVGWFCQ-KAVEIKNGINKP 226 (347)
T ss_dssp CBCTTSCCCCCHHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEECTTCCCBTTBCHHHHHHH-HHHHHHTTCCCC
T ss_pred CccccCCCCCCCchHHHHHHHHHHHHHHHHH-hC---CcEEEEccCceeCcCCCCCCcCcHHHHHHH-HHHhCcccCCCC
Confidence 47777765543 2 3455567777666654 57 9999999999999976321 1111111111 111211 1 16
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcC-CCCCCcceeecCCC--cccHHHHHHHHHHHhccccCCCCCCCCCCCH
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVD-PYARNEAFNCSNGD--VFKWKHLWKVLAEQFEIENYGLPQDGERVRL 229 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~-~~a~g~~fNI~~g~--~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~ 229 (309)
+..+|++. +.+++++++|+|++++.++.. +...|++|||++|+ ++|+.|+++.|++.+|.+.... ..|.
T Consensus 227 ~~~~g~g~---~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~-- 298 (347)
T 1orr_A 227 FTISGNGK---QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFT---NLPV-- 298 (347)
T ss_dssp EEEESSSC---CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEE---EECC--
T ss_pred eEEecCCc---ceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCce---eCCC--
Confidence 77778877 779999999999999998875 33568999999987 4999999999999999764321 0110
Q ss_pred HHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 230 EEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
. +... ....+|++|+++ +||+|+++++|+++++++|+++.
T Consensus 299 ------~--------------~~~~----------------~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 339 (347)
T 1orr_A 299 ------R--------------ESDQ----------------RVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI 339 (347)
T ss_dssp ------C--------------SSCC----------------SEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred ------C--------------CCCc----------------ceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHH
Confidence 0 0110 134689999987 69999999999999999999874
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=235.89 Aligned_cols=256 Identities=13% Similarity=0.028 Sum_probs=169.9
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCC---ceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNL---RHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v---~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
++|+|||+|+... .++.+.+++|+.||.|++++|.+. ++ +|||++||..+||.. ...|++|
T Consensus 78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~iv~~SS~~v~g~~---------~~~~~~E 146 (372)
T 1db3_A 78 QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL--GLEKKTRFYQASTSELYGLV---------QEIPQKE 146 (372)
T ss_dssp CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT--TCTTTCEEEEEEEGGGGTTC---------CSSSBCT
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh--CCCCCcEEEEeCChhhhCCC---------CCCCCCc
Confidence 4799999998432 256678899999999999999886 56 799999999999864 2458999
Q ss_pred CCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCC-ceeecCC
Q 045430 84 DLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGV-PLLFPGS 158 (309)
Q Consensus 84 ~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~-~~~~~G~ 158 (309)
+++..|. + .+|...|.+++.++.+ .+ ++++++||+++|||+.+. ....... .+...+ ..|. ++.+.|+
T Consensus 147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~~r~~~~~gp~~~~~~~~~~~~-~~~~~~--~~g~~~~~~~g~ 219 (372)
T 1db3_A 147 TTPFYPRSPYAVAKLYAYWITVNYRES-YG---MYACNGILFNHESPRRGETFVTRKIT-RAIANI--AQGLESCLYLGN 219 (372)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECCEECTTSCTTSHHHHHH-HHHHHH--HTTSCCCEEESC
T ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHH-hC---CCeEEEEECCccCCCCCCcchhhHHH-HHHHHH--HcCCCCceeecC
Confidence 9886654 2 3345566666666553 57 999999999999998643 2211111 111122 1344 3345677
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCC-HHHHHhccH
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVR-LEEIMRGKE 237 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~-~~~~~~~~~ 237 (309)
+. +.++++||+|+|++++.++.++. +++|||++++++|+.|+++.|++.+|.+..... ...|.+ +...+....
T Consensus 220 ~~---~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~p~~~~~~~~~~~~ 293 (372)
T 1db3_A 220 MD---SLRDWGHAKDYVKMQWMMLQQEQ--PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEG-TGVEEKGIVVSVTGHD 293 (372)
T ss_dssp TT---CEECCEEHHHHHHHHHHTTSSSS--CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEES-CGGGCEEEEEEECSSS
T ss_pred CC---ceeeeeEHHHHHHHHHHHHhcCC--CceEEEcCCCceeHHHHHHHHHHHhCCCccccc-cccccccccccccccc
Confidence 76 67999999999999988876643 589999999999999999999999997643110 001110 000000000
Q ss_pred --HHHHHHHHH-hCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 238 --GVWEQIVKE-NQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 238 --~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
..| +... ....+..+.. . ......+|++|+++ +||+|.++++||++++++||++
T Consensus 294 ~~~~~--~~~~~~~~~~~~~~~---~--------~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~ 351 (372)
T 1db3_A 294 APGVK--PGDVIIAVDPRYFRP---A--------EVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE 351 (372)
T ss_dssp CTTCC--TTCEEEEECGGGCCC---C--------C-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred ccccc--cccceeeccccccCC---C--------chhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHH
Confidence 000 0000 0000000000 0 01245689999987 7999999999999999999965
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-30 Score=231.07 Aligned_cols=224 Identities=10% Similarity=0.030 Sum_probs=168.4
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++.+++++|+.||.|++++|++. ++ ||||+||..+||.. ...|++|+++
T Consensus 63 ~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~--~~-~iv~~SS~~v~~~~---------~~~~~~E~~~ 130 (292)
T 1vl0_A 63 KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV--GA-EIVQISTDYVFDGE---------AKEPITEFDE 130 (292)
T ss_dssp CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--TC-EEEEEEEGGGSCSC---------CSSCBCTTSC
T ss_pred CCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEechHHeECCC---------CCCCCCCCCC
Confidence 6899999998543 367789999999999999999987 56 99999999999864 2468999998
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
..| .+.|+..|...|...+..+ .+++++||++|||| ..+..... ...+ ..+.++.+.|+ +.+
T Consensus 131 ~~~--~~~Y~~sK~~~E~~~~~~~---~~~~~lR~~~v~G~-~~~~~~~~-----~~~~--~~~~~~~~~~~-----~~~ 192 (292)
T 1vl0_A 131 VNP--QSAYGKTKLEGENFVKALN---PKYYIVRTAWLYGD-GNNFVKTM-----INLG--KTHDELKVVHD-----QVG 192 (292)
T ss_dssp CCC--CSHHHHHHHHHHHHHHHHC---SSEEEEEECSEESS-SSCHHHHH-----HHHH--HHCSEEEEESS-----CEE
T ss_pred CCC--ccHHHHHHHHHHHHHHhhC---CCeEEEeeeeeeCC-CcChHHHH-----HHHH--hcCCcEEeecC-----eee
Confidence 654 3468877777766543345 68999999999999 43432211 1121 13667766665 558
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHH
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKE 246 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (309)
++++++|+|++++.++..+ .|++|||++++.+|+.|+.+.|++.+|.+.... ..|... .
T Consensus 193 ~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~~---~------------- 251 (292)
T 1vl0_A 193 TPTSTVDLARVVLKVIDEK--NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVT---PCTTEE---F------------- 251 (292)
T ss_dssp CCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEE---EECSTT---S-------------
T ss_pred CCccHHHHHHHHHHHHhcC--CCcEEEecCCCCccHHHHHHHHHHHhCCCCcee---eccccc---c-------------
Confidence 9999999999999988765 689999999999999999999999999764311 011110 0
Q ss_pred hCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 247 NQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 247 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
...... ..+..+|++|+++ +||+|+ +++++++++++||++
T Consensus 252 -~~~~~~----------------~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 252 -PRPAKR----------------PKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQM 292 (292)
T ss_dssp -CCSSCC----------------CSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHTC
T ss_pred -CcccCC----------------CccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhcC
Confidence 000000 1145789999998 699999 999999999999974
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=236.39 Aligned_cols=234 Identities=12% Similarity=0.025 Sum_probs=167.4
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++.+++++|+.||.|++++|.+.+ +++||||+||..+||.. . ...|++|+++
T Consensus 80 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~vyg~~----~----~~~~~~E~~~ 150 (357)
T 1rkx_A 80 QPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSDKCYDNK----E----WIWGYRENEA 150 (357)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCGGGBCCC----C----SSSCBCTTSC
T ss_pred CCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEecCHHHhCCC----C----cCCCCCCCCC
Confidence 4899999998432 2667789999999999999998862 38999999999999964 0 1357899887
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhc--------CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKR--------KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~--------~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
..|. + .+|+..|.++..++.+. .+ ++++++||++||||++...... .. .+...+ ..|.++.+
T Consensus 151 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~g---i~~~~lrp~~v~G~~~~~~~~~-~~-~~~~~~--~~g~~~~~ 223 (357)
T 1rkx_A 151 MGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG---TAVATVRAGNVIGGGDWALDRI-VP-DILRAF--EQSQPVII 223 (357)
T ss_dssp BCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC---CEEEEEECCCEECTTCCCSSCH-HH-HHHHHH--HTTCCEEC
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCC---ceEEEEeeceeeCCCCCccccH-HH-HHHHHH--hcCCCEEE
Confidence 6544 2 34555666666655421 27 9999999999999987321111 11 111222 23666665
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcC----CCCCCcceeecCC--CcccHHHHHHHHHHHhccccCCCCCCCCCCCH
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVD----PYARNEAFNCSNG--DVFKWKHLWKVLAEQFEIENYGLPQDGERVRL 229 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~----~~a~g~~fNI~~g--~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~ 229 (309)
+ ++. +.++++||+|+|++++.++.+ +...|++|||+++ +++|+.|+++.|++.+|.+.... .+
T Consensus 224 ~-~~~---~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~----~~--- 292 (357)
T 1rkx_A 224 R-NPH---AIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ----LD--- 292 (357)
T ss_dssp S-CTT---CEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE----C----
T ss_pred C-CCC---CeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccc----cC---
Confidence 4 344 668999999999999988863 2356899999974 68999999999999999754311 00
Q ss_pred HHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 230 EEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
... .+.. ..+..+|++|+++ +||+|+++++++++++++||++.
T Consensus 293 ----~~~-------------~~~~----------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 336 (357)
T 1rkx_A 293 ----GNA-------------HPHE----------------AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW 336 (357)
T ss_dssp -----------------------C----------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ----CCC-------------CCcC----------------cccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence 000 0000 1145789999987 79999999999999999999763
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=226.97 Aligned_cols=236 Identities=11% Similarity=0.035 Sum_probs=166.9
Q ss_pred cCCCCccEEEEeeccc--CC-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWAS--RP-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~--~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++++|.|+|+|+.+ .. ...++.++|+.+|+||++++++.....++||++||..+||.. ..
T Consensus 47 ~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~---------~~ 117 (298)
T 4b4o_A 47 SGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPS---------LT 117 (298)
T ss_dssp HCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCC---------SS
T ss_pred hhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCC---------CC
Confidence 4678899999999732 11 235578999999999999998775456679999999999964 35
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHH--hcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVE--KRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~--~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.+.+|++|..|. .+|...+...+... ...+ ++++++||++||||+++....+ ....+ .|.. ...
T Consensus 118 ~~~~E~~p~~~~--~~~~~~~~~~e~~~~~~~~~---~~~~~~r~~~v~g~~~~~~~~~-------~~~~~-~~~~-~~~ 183 (298)
T 4b4o_A 118 AEYDEDSPGGDF--DFFSNLVTKWEAAARLPGDS---TRQVVVRSGVVLGRGGGAMGHM-------LLPFR-LGLG-GPI 183 (298)
T ss_dssp CCBCTTCCCSCS--SHHHHHHHHHHHHHCCSSSS---SEEEEEEECEEECTTSHHHHHH-------HHHHH-TTCC-CCB
T ss_pred CcccccCCcccc--chhHHHHHHHHHHHHhhccC---CceeeeeeeeEEcCCCCchhHH-------HHHHh-cCCc-cee
Confidence 689999986543 34443333333322 1256 9999999999999986322111 11112 3443 345
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++. +.++++||||+|+++++++.++.. +++||+++++++|++|+.+.|++.+|.+...+ +|.++.+.+.+.
T Consensus 184 g~g~---~~~~~ihv~Dva~a~~~~~~~~~~-~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~p----vP~~~~~~~~g~ 255 (298)
T 4b4o_A 184 GSGH---QFFPWIHIGDLAGILTHALEANHV-HGVLNGVAPSSATNAEFAQTFGAALGRRAFIP----LPSAVVQAVFGR 255 (298)
T ss_dssp TTSC---SBCCEEEHHHHHHHHHHHHHCTTC-CEEEEESCSCCCBHHHHHHHHHHHHTCCCCCC----BCHHHHHHHHCH
T ss_pred cccC---ceeecCcHHHHHHHHHHHHhCCCC-CCeEEEECCCccCHHHHHHHHHHHhCcCCccc----CCHHHHHHHhcc
Confidence 8887 669999999999999999987755 45999999999999999999999999764322 444333332111
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcC-ChHHHHHHHHHH
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFR-NSKNSFVNWIDK 301 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~-~~~~gl~~t~~~ 301 (309)
+ ....++. ++.++++|++++||++++ +++++|++.++.
T Consensus 256 ~------------------------~~~~~l~---~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~~ 294 (298)
T 4b4o_A 256 Q------------------------RAIMLLE---GQKVIPRRTLATGYQYSFPELGAALKEIAEN 294 (298)
T ss_dssp H------------------------HHHHHHC---CCCBCCHHHHHTTCCCSCCSHHHHHHHHHHC
T ss_pred h------------------------hHHHhhC---CCEEcHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 0 0011122 456788999999999998 689999987763
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=234.38 Aligned_cols=251 Identities=13% Similarity=-0.036 Sum_probs=171.9
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCC---ceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNL---RHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v---~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
++|+|||+|+... .++++.+++|+.||.|++++|.+. ++ +||||+||..+||.. ...|++|
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~~~~iv~~SS~~~~~~~---------~~~~~~E 170 (375)
T 1t2a_A 102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC--GLINSVKFYQASTSELYGKV---------QEIPQKE 170 (375)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT--TCTTTCEEEEEEEGGGTCSC---------SSSSBCT
T ss_pred CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh--CCCccceEEEecchhhhCCC---------CCCCCCc
Confidence 4799999998532 266778999999999999999886 56 899999999999864 2568999
Q ss_pred CCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHhCC-ceeecCC
Q 045430 84 DLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHEGV-PLLFPGS 158 (309)
Q Consensus 84 ~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~g~-~~~~~G~ 158 (309)
+++..|. + .+|...|.+++.++.+ .+ ++++++||++||||+.. +....... .++..+. .|. +..+.|+
T Consensus 171 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~i~r~~~~~gp~~~~~~~~~~~~-~~~~~~~--~g~~~~~~~g~ 243 (375)
T 1t2a_A 171 TTPFYPRSPYGAAKLYAYWIVVNFREA-YN---LFAVNGILFNHESPRRGANFVTRKIS-RSVAKIY--LGQLECFSLGN 243 (375)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEECTTSCTTSHHHHHH-HHHHHHH--HTSCSCEEESC
T ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHH-hC---CCEEEEecccccCCCCCCCcchHHHH-HHHHHHH--cCCCceeEeCC
Confidence 9886654 1 3345566666666553 57 99999999999999764 22211111 1111221 243 3345677
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHH
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEG 238 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+. +.++++|++|+|++++.++.++. +++|||++++++|+.|+++.|++.+|.+.... .+.+|.++.......
T Consensus 244 ~~---~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~p~~~~~~~~~~-- 315 (375)
T 1t2a_A 244 LD---AKRDWGHAKDYVEAMWLMLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWE-GKNENEVGRCKETGK-- 315 (375)
T ss_dssp TT---CEECCEEHHHHHHHHHHHHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEE-SCGGGCEEEETTTCC--
T ss_pred CC---ceeeeEEHHHHHHHHHHHHhcCC--CceEEEeCCCcccHHHHHHHHHHHhCCCcccc-ccccccccccccccc--
Confidence 76 67999999999999999887653 58999999999999999999999999764311 011222211000000
Q ss_pred HHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 239 VWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.+ ..+.+..+.. . ......+|++|+++ +||+|+++++|+++++++|+++.
T Consensus 316 ---~~---~~~~~~~~~~---~--------~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 366 (375)
T 1t2a_A 316 ---VH---VTVDLKYYRP---T--------EVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVEL 366 (375)
T ss_dssp ---EE---EEECGGGSCS---S--------CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ---ce---eecCcccCCc---c--------cchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence 00 0000000000 0 01245789999987 79999999999999999999763
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.8e-29 Score=226.46 Aligned_cols=233 Identities=10% Similarity=-0.018 Sum_probs=166.1
Q ss_pred CccEEEEeecccC----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 12 ~vd~V~H~A~~~~----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
++|+|||+|+... .++++++++|+.||.|++++|++. +++||||+||..+||.. . ...|.+|+.|.
T Consensus 62 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~----~----~~~~~~e~~~~ 131 (317)
T 3ajr_A 62 SIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH--RVEKVVIPSTIGVFGPE----T----PKNKVPSITIT 131 (317)
T ss_dssp TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCTT----S----CSSSBCSSSCC
T ss_pred CCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc--CCCEEEEecCHHHhCCC----C----CCCCccccccC
Confidence 7899999998432 266778999999999999999886 68999999999999853 0 13568888876
Q ss_pred CCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccC--CC-cchhHHHHHHHHHHHhHhCCceeecCCccc
Q 045430 88 LNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSP--YS-MMNVVGTLCVYAAICKHEGVPLLFPGSKDC 161 (309)
Q Consensus 88 ~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~--~~-~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~ 161 (309)
.|. + .+|...|.++..+..+ .+ ++++++||++|||+.. +. ....+ +..+... ..+.++..++++.
T Consensus 132 ~p~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~lR~~~~~g~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~- 202 (317)
T 3ajr_A 132 RPRTMFGVTKIAAELLGQYYYEK-FG---LDVRSLRYPGIISYKAEPTAGTTDYA--VEIFYYA--VKREKYKCYLAPN- 202 (317)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEECSSSCCCSCSSTHH--HHHHHHH--HTTCCEEECSCTT-
T ss_pred CCCchHHHHHHHHHHHHHHHHHh-cC---CeEEEEecCcEeccCCCCCCcchhHH--HHHHHHH--HhCCCceeecCcc-
Confidence 554 2 3455566666665553 57 9999999999999753 11 11212 1122221 1234556666666
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCC---CCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHH
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYA---RNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEG 238 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a---~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+.++++|++|+|++++.++.++.. .|++|||++ +.+|+.|+++.|++.+|...... .|. . ..
T Consensus 203 --~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~~i~~----~~~-~-------~~ 267 (317)
T 3ajr_A 203 --RALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPEFEIEY----KED-F-------RD 267 (317)
T ss_dssp --CCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCSCCEEE----CCC-H-------HH
T ss_pred --ceeeeeEHHHHHHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCcccccc----ccc-c-------ch
Confidence 668999999999999988876543 368999996 67999999999999887211100 010 0 00
Q ss_pred HHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 239 VWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.+ .. .+...+|++|+++ +||+|+++++++++++++||++.
T Consensus 268 ---~~-------~~-----------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 308 (317)
T 3ajr_A 268 ---KI-------AA-----------------TWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEK 308 (317)
T ss_dssp ---HH-------HT-----------------TSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ---hh-------cc-----------------ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 00 00 1134689999987 79999999999999999999874
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=232.23 Aligned_cols=229 Identities=11% Similarity=-0.006 Sum_probs=159.9
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++++++++|+.||.|++++|.+. ++ ||||+||..+||.. ..|++|+++
T Consensus 60 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~~~~----------~~~~~E~~~ 126 (315)
T 2ydy_A 60 QPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV--GA-FLIYISSDYVFDGT----------NPPYREEDI 126 (315)
T ss_dssp CCSEEEECC-------------------CHHHHHHHHHHHHH--TC-EEEEEEEGGGSCSS----------SCSBCTTSC
T ss_pred CCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEchHHHcCCC----------CCCCCCCCC
Confidence 4899999998432 256778999999999999999986 55 99999999999852 567999987
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC---CcchhHHHHHHHHHHHhHhCCceeecCCccccc
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY---SMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWE 163 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~---~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~ 163 (309)
..| .+.|+..|...|...+..+ ++++++||++||||++. ++...+. ..+. ..|.++.+.|+
T Consensus 127 ~~~--~~~Y~~sK~~~e~~~~~~~---~~~~~lR~~~v~G~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~----- 190 (315)
T 2ydy_A 127 PAP--LNLYGKTKLDGEKAVLENN---LGAAVLRIPILYGEVEKLEESAVTVMF-----DKVQ-FSNKSANMDHW----- 190 (315)
T ss_dssp CCC--CSHHHHHHHHHHHHHHHHC---TTCEEEEECSEECSCSSGGGSTTGGGH-----HHHH-CCSSCEEEECS-----
T ss_pred CCC--cCHHHHHHHHHHHHHHHhC---CCeEEEeeeeeeCCCCcccccHHHHHH-----HHHH-hcCCCeeeccC-----
Confidence 554 4568877777666543346 78899999999999875 3333221 1121 03556665554
Q ss_pred cceeccCHHHHHHHHHHHhcCC---CCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHH
Q 045430 164 GYSVASDADLIAEQHIWAAVDP---YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240 (309)
Q Consensus 164 ~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+.+++++++|+|++++.++.++ ...|++|||++++++|+.|+++.|++.+|.+.... .+.+. + ...
T Consensus 191 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~----~~~~~--~-~~~---- 259 (315)
T 2ydy_A 191 QQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHL----RPITD--S-PVL---- 259 (315)
T ss_dssp SBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTE----EEECS--C-CCS----
T ss_pred ceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhhe----ecccc--c-ccc----
Confidence 5689999999999999887643 35689999999999999999999999999764311 11110 0 000
Q ss_pred HHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHC
Q 045430 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.... ..+..+|++|++++||+|.++++++++++++||++.
T Consensus 260 --------~~~~-----------------~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~ 299 (315)
T 2ydy_A 260 --------GAQR-----------------PRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID 299 (315)
T ss_dssp --------SSCC-----------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred --------ccCC-----------------CcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence 0000 124578999999889999999999999999999875
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-29 Score=229.78 Aligned_cols=241 Identities=10% Similarity=-0.017 Sum_probs=170.5
Q ss_pred CCccEEEEeecccC----CChHHHHHhHHHHHHHHHHHhCcCCC---CCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR----PTEAENCEVNGAMLRNVLRSVIPNAP---NLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 11 ~~vd~V~H~A~~~~----~~~~~~~~vNv~gt~nll~a~~~~~~---~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
.++|+|||+|+... .++.+.+++|+.||.|++++|++... +++|||++||..+||.. ...|++|
T Consensus 85 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~---------~~~~~~E 155 (342)
T 2hrz_A 85 ARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP---------LPYPIPD 155 (342)
T ss_dssp TCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS---------CCSSBCT
T ss_pred cCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC---------CCCCcCC
Confidence 37899999998532 36777899999999999999987520 17899999999999863 2458999
Q ss_pred CCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceec-ccCCC-cchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 84 DLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFG-FSPYS-MMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 84 ~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyG-p~~~~-~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
++|..|. + .+|...|.++.+++.+ .+ ++++++|+++||| |+... ....... .+...+ ..|.++.++++
T Consensus 156 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~ir~~~v~g~pg~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~ 228 (342)
T 2hrz_A 156 EFHTTPLTSYGTQKAICELLLSDYSRR-GF---FDGIGIRLPTICIRPGKPNAAASGFFS-NILREP--LVGQEAVLPVP 228 (342)
T ss_dssp TCCCCCSSHHHHHHHHHHHHHHHHHHT-TS---CEEEEEEECEETTCCSSCCCSGGGHHH-HHHHHH--HTTCCEEECSC
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHh-cC---CCceeEEeeeEEecCCCCcchhHHHHH-HHHHHH--hcCCCeeccCC
Confidence 9987654 2 3455566666666653 57 9999999999999 77532 1111111 111121 23666666666
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCC---CCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhc
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYA---RNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRG 235 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a---~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+. ..++++|++|+|++++.++..+.. .+++|||+ |+.+|+.|+++.|++.+|.+..... ...|.+. .
T Consensus 229 ~~---~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~-~~~~~~~---~-- 298 (342)
T 2hrz_A 229 ES---IRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALI-RREPNEM---I-- 298 (342)
T ss_dssp TT---CEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTE-EECCCHH---H--
T ss_pred Cc---cceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccce-eeccCcc---h--
Confidence 54 557889999999999998876543 57899996 5789999999999999997642110 0011000 0
Q ss_pred cHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCC
Q 045430 236 KEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRI 307 (309)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~ 307 (309)
..+ .. .+...+|++|++++||+|+++++|+++++++||+ .|.
T Consensus 299 -----~~~-----------------------~~-~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~-~~~ 340 (342)
T 2hrz_A 299 -----MRM-----------------------CE-GWAPGFEAKRARELGFTAESSFEEIIQVHIEDEL-GGS 340 (342)
T ss_dssp -----HHH-----------------------HT-TSCCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS-TTC
T ss_pred -----hhh-----------------------hc-ccccccChHHHHHcCCCCCCCHHHHHHHHHHHhc-CCC
Confidence 000 00 1133589999988999999999999999999998 444
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=254.82 Aligned_cols=240 Identities=13% Similarity=0.069 Sum_probs=170.2
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+.... ++.+++++|+.||.|++++|++. +++|||++||..+||... .. ....|++|+++
T Consensus 84 ~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~iV~~SS~~vyg~~~-~~----~~~~~~~E~~~ 156 (699)
T 1z45_A 84 KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY--NVSKFVFSSSATVYGDAT-RF----PNMIPIPEECP 156 (699)
T ss_dssp CCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCCGG-GS----TTCCSBCTTSC
T ss_pred CCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECcHHHhCCCc-cc----cccCCccccCC
Confidence 78999999985331 55678999999999999999886 689999999999998530 00 01357899987
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcc--------hhHHHHHHHHHHHhHhCCcee
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMM--------NVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~--------~~~~~~~i~~~l~~~~g~~~~ 154 (309)
..|. + .+|+..|.++++++.+. .+ ++++|+||++||||++...+ ..+. ..+..+.+..+.++.
T Consensus 157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~g---~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~ 231 (699)
T 1z45_A 157 LGPTNPYGHTKYAIENILNDLYNSDKKS---WKFAILRYFNPIGAHPSGLIGEDPLGIPNNLL--PYMAQVAVGRREKLY 231 (699)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHSTTS---CEEEEEEECEEECCCTTSSCCCCCSSSCCSHH--HHHHHHHTTSSSCCC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCC---CcEEEEEeccccCCCcccccccccccchhHHH--HHHHHHHhcCCCceE
Confidence 6554 2 34555666666655421 47 99999999999999653211 1111 122222222234666
Q ss_pred ecC------CccccccceeccCHHHHHHHHHHHhcCC------CCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCC
Q 045430 155 FPG------SKDCWEGYSVASDADLIAEQHIWAAVDP------YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQ 222 (309)
Q Consensus 155 ~~G------~~~~~~~~~~~~~vd~la~a~i~aa~~~------~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~ 222 (309)
++| ++. +.++++||+|+|++++.++..+ ...+++|||++++.+|+.|+++.|++.+|.+.+..
T Consensus 232 ~~g~~~~~~~g~---~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~-- 306 (699)
T 1z45_A 232 IFGDDYDSRDGT---PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK-- 306 (699)
T ss_dssp CC------CCSS---CEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---
T ss_pred EeCCcccCCCCC---eeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCce--
Confidence 666 455 6799999999999999888632 23468999999999999999999999999764321
Q ss_pred CCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHH
Q 045430 223 DGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDK 301 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~ 301 (309)
..... .... .+..+|++|+++ +||+|+++++||++++++|
T Consensus 307 ---------~~~~~--------------~~~~----------------~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w 347 (699)
T 1z45_A 307 ---------VTGRR--------------AGDV----------------LNLTAKPDRAKRELKWQTELQVEDSCKDLWKW 347 (699)
T ss_dssp -------------------------------C----------------CCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHH
T ss_pred ---------ecCCC--------------CCcc----------------ccccCCHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 11100 0111 145789999986 7999999999999999999
Q ss_pred HHHCCC
Q 045430 302 MKTYRI 307 (309)
Q Consensus 302 ~r~~~~ 307 (309)
|+++++
T Consensus 348 ~~~~~~ 353 (699)
T 1z45_A 348 TTENPF 353 (699)
T ss_dssp HHHCTT
T ss_pred HHhCCc
Confidence 998753
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=233.83 Aligned_cols=232 Identities=10% Similarity=-0.021 Sum_probs=167.9
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCc-----eEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLR-----HVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~-----r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
++|+|||+|+... .++.+++++|+.||.|++++|.+. +++ ||||+||..+||.. .. |+
T Consensus 106 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~--~~~~~~~~~~v~~SS~~vyg~~---------~~-~~ 173 (381)
T 1n7h_A 106 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH--TIDSGRTVKYYQAGSSEMFGST---------PP-PQ 173 (381)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH--HHHHCCCCEEEEEEEGGGGTTS---------CS-SB
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh--CCccCCccEEEEeCcHHHhCCC---------CC-CC
Confidence 4799999998533 266778999999999999999886 566 99999999999964 24 89
Q ss_pred CCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCCc-eeec
Q 045430 82 TEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGVP-LLFP 156 (309)
Q Consensus 82 ~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~~-~~~~ 156 (309)
+|+++..|. + .+|...|.++..++.+ .+ ++++++||.++|||+... ...... ..+...+. .|.+ ..+.
T Consensus 174 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~~~r~~~~~gp~~~~~~~~~~~-~~~~~~~~--~g~~~~~~~ 246 (381)
T 1n7h_A 174 SETTPFHPRSPYAASKCAAHWYTVNYREA-YG---LFACNGILFNHESPRRGENFVTRKI-TRALGRIK--VGLQTKLFL 246 (381)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEECTTSCTTSHHHHH-HHHHHHHH--HTSCCCEEE
T ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHHH-hC---CcEEEEEeCceeCCCCCCcchhHHH-HHHHHHHH--cCCCCeEEe
Confidence 999886554 1 3345566666665553 57 999999999999998743 221111 11111221 2433 3345
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGK 236 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++. +.++++|++|+|++++.++.++. +++|||++|+.+|+.|+++.|++.+|.+.... .++.. .
T Consensus 247 g~~~---~~~~~v~v~Dva~a~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~----~~~~~---~--- 311 (381)
T 1n7h_A 247 GNLQ---ASRDWGFAGDYVEAMWLMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDY----VEIDQ---R--- 311 (381)
T ss_dssp SCTT---CEEECEEHHHHHHHHHHHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGT----EEECG---G---
T ss_pred CCCC---ceeeeEEHHHHHHHHHHHHhCCC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccc----cccCc---c---
Confidence 7766 67899999999999999887653 58999999999999999999999999753211 00000 0
Q ss_pred HHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 237 EGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
...+... ....+|++|+++ +||+|+++++++++++++||++
T Consensus 312 -----------~~~~~~~----------------~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~ 353 (381)
T 1n7h_A 312 -----------YFRPAEV----------------DNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLE 353 (381)
T ss_dssp -----------GSCSSCC----------------CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred -----------cCCcccc----------------ccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 0001111 134689999987 6999999999999999999865
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=226.08 Aligned_cols=221 Identities=14% Similarity=0.026 Sum_probs=162.8
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++++|+|||+|+..... ...++|++++|++...+++||||+||..+||.. ...|++|+++..|
T Consensus 61 ~~~~d~vi~~a~~~~~~--------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~---------~~~~~~E~~~~~p 123 (286)
T 3ius_A 61 LDGVTHLLISTAPDSGG--------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDH---------DGAWVDETTPLTP 123 (286)
T ss_dssp CTTCCEEEECCCCBTTB--------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCC---------TTCEECTTSCCCC
T ss_pred cCCCCEEEECCCccccc--------cHHHHHHHHHHHhhcCCceEEEEeecceecCCC---------CCCCcCCCCCCCC
Confidence 67899999999854332 124689999998843379999999999999964 3568999998664
Q ss_pred cccchHHHHHHHHHHHHhcC-CCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceec
Q 045430 90 VTNFYYTQEDILFEEVEKRK-GPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA 168 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~-~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~ 168 (309)
. +.|+..|...|...... + ++++|+||++||||++..+.. + ..|.++.+++++ +.+++
T Consensus 124 ~--~~Y~~sK~~~E~~~~~~~~---~~~~ilRp~~v~G~~~~~~~~----------~--~~~~~~~~~~~~----~~~~~ 182 (286)
T 3ius_A 124 T--AARGRWRVMAEQQWQAVPN---LPLHVFRLAGIYGPGRGPFSK----------L--GKGGIRRIIKPG----QVFSR 182 (286)
T ss_dssp C--SHHHHHHHHHHHHHHHSTT---CCEEEEEECEEEBTTBSSSTT----------S--SSSCCCEEECTT----CCBCE
T ss_pred C--CHHHHHHHHHHHHHHhhcC---CCEEEEeccceECCCchHHHH----------H--hcCCccccCCCC----cccce
Confidence 4 45777777666554334 7 999999999999998654321 1 135666666553 56899
Q ss_pred cCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhC
Q 045430 169 SDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQ 248 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (309)
+|++|+|++++.++.++. .|++|||++++++|+.|+++.+++.+|.+.+.. .+.... ..
T Consensus 183 i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~----~~~~~~----~~------------ 241 (286)
T 3ius_A 183 IHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPA----VDFDKA----DL------------ 241 (286)
T ss_dssp EEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCE----EEGGGS----CC------------
T ss_pred EEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcc----cchhhh----cc------------
Confidence 999999999999998765 689999999999999999999999999764421 111100 00
Q ss_pred CCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcC-ChHHHHHHHHHHH
Q 045430 249 LQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFR-NSKNSFVNWIDKM 302 (309)
Q Consensus 249 l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~-~~~~gl~~t~~~~ 302 (309)
++. ....+ ..+..+|++|+++ +||+|++ +++|+++++++.+
T Consensus 242 ---~~~--------~~~~~--~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~~ 284 (286)
T 3ius_A 242 ---TPM--------ARSFY--SENKRVRNDRIKEELGVRLKYPNYRVGLEALQADA 284 (286)
T ss_dssp ---CHH--------HHHTT--SCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHTC
T ss_pred ---Chh--------HHHhh--cCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHhc
Confidence 010 00000 1366899999998 6999999 8999999998754
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=224.90 Aligned_cols=250 Identities=11% Similarity=-0.016 Sum_probs=171.1
Q ss_pred CccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCC-ceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNL-RHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 12 ~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v-~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
++|+|||+|+.. ..++++++++|+.||.|++++|.+. ++ +|||++||..+||.. ...|++|+.
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~~~~iv~~SS~~vyg~~---------~~~~~~e~~ 143 (345)
T 2z1m_A 75 QPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV--KPDTKFYQASTSEMFGKV---------QEIPQTEKT 143 (345)
T ss_dssp CCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH--CTTCEEEEEEEGGGGCSC---------SSSSBCTTS
T ss_pred CCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCceEEEEechhhcCCC---------CCCCCCccC
Confidence 469999999853 3467889999999999999999876 56 899999999999964 256899998
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHhCCc-eeecCCcc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHEGVP-LLFPGSKD 160 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~g~~-~~~~G~~~ 160 (309)
+..|. + .+|...|.+++.++.+ .+ ++++++|+.++|||+.. +.+..... .....+. .|.+ ..+.|++.
T Consensus 144 ~~~~~~~Y~~sK~~~e~~~~~~~~~-~~---~~~~~~r~~~~~gpg~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~ 216 (345)
T 2z1m_A 144 PFYPRSPYAVAKLFGHWITVNYREA-YN---MFACSGILFNHESPLRGIEFVTRKIT-YSLARIK--YGLQDKLVLGNLN 216 (345)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECCEECTTSCTTSHHHHHH-HHHHHHH--TTSCSCEEESCTT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHH-hC---CceEeeeeeeecCCCCCCcchhHHHH-HHHHHHH--cCCCCeeeeCCCC
Confidence 76554 2 3455566666666553 57 99999999999999864 23221111 1111111 2432 33457766
Q ss_pred ccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHH
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+.++++|++|+|+++++++.++. +++|||++++.+|+.|+.+.|++.+|.+.... ..++|.++.. .....
T Consensus 217 ---~~~~~~~v~Dva~a~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~p~~~~~--~~~~~-- 286 (345)
T 2z1m_A 217 ---AKRDWGYAPEYVEAMWLMMQQPE--PDDYVIATGETHTVREFVEKAAKIAGFDIEWV-GEGINEKGID--RNTGK-- 286 (345)
T ss_dssp ---CEECCEEHHHHHHHHHHHHTSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEE-SCGGGCEEEE--TTTCC--
T ss_pred ---ceeeeEEHHHHHHHHHHHHhCCC--CceEEEeCCCCccHHHHHHHHHHHhCCCcccc-cccccccccc--ccccc--
Confidence 66899999999999999887653 47999999999999999999999999764311 0012221110 00000
Q ss_pred HHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.+ ....+..... . ......+|++|+++ +||+|+++++++++++++|+++
T Consensus 287 -~~---~~~~~~~~~~---~--------~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~ 336 (345)
T 2z1m_A 287 -VI---VEVSEEFFRP---A--------EVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLK 336 (345)
T ss_dssp -EE---EEECGGGSCS---S--------CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred -cc---cccCcccCCC---C--------CcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHH
Confidence 00 0000000000 0 01245689999987 7999999999999999999976
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=228.49 Aligned_cols=220 Identities=14% Similarity=0.057 Sum_probs=164.6
Q ss_pred CccEEEEeecccCC---ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC--CCCCCCC
Q 045430 12 DVTHIFYVTWASRP---TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT--PFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~~---~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~--p~~E~~p 86 (309)
++|+|||+|+.... ...+ +++|+.||.|++++|.+. +++|||++||..+||.. ... |++|++
T Consensus 88 ~~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~~~~---------~~~~~~~~E~~- 154 (330)
T 2pzm_A 88 KPTHVVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKA--GVKRLLNFQTALCYGRP---------ATVPIPIDSPT- 154 (330)
T ss_dssp CCSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHH--TCSEEEEEEEGGGGCSC---------SSSSBCTTCCC-
T ss_pred CCCEEEECCccCCCccccChh-HHHHHHHHHHHHHHHHHc--CCCEEEEecCHHHhCCC---------ccCCCCcCCCC-
Confidence 78999999985332 1122 899999999999999976 68999999999999853 123 889987
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHhCCceeecCCccccccc
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGY 165 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~ 165 (309)
. |.+.|+..|...|...+..+ ++++++||++||||+.. +.... +...+. .|. ..+|++. .
T Consensus 155 -~--~~~~Y~~sK~~~e~~~~~~~---~~~~~iR~~~v~gp~~~~~~~~~-----~~~~~~--~~~--~~~~~~~----~ 215 (330)
T 2pzm_A 155 -A--PFTSYGISKTAGEAFLMMSD---VPVVSLRLANVTGPRLAIGPIPT-----FYKRLK--AGQ--KCFCSDT----V 215 (330)
T ss_dssp -C--CCSHHHHHHHHHHHHHHTCS---SCEEEEEECEEECTTCCSSHHHH-----HHHHHH--TTC--CCCEESC----E
T ss_pred -C--CCChHHHHHHHHHHHHHHcC---CCEEEEeeeeeECcCCCCCHHHH-----HHHHHH--cCC--EEeCCCC----E
Confidence 2 33468888877776654346 99999999999999862 22211 111221 233 3344432 4
Q ss_pred eeccCHHHHHH-HHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHH
Q 045430 166 SVASDADLIAE-QHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIV 244 (309)
Q Consensus 166 ~~~~~vd~la~-a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
+++++++|+|+ ++++++..+. |++|||++|+++|+.|+++.|++.+|.+ . + ...|.+
T Consensus 216 ~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~-~--~~~~~~---------------- 273 (330)
T 2pzm_A 216 RDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGHSIKEVFDVVLDYVGAT-L-A--EPVPVV---------------- 273 (330)
T ss_dssp ECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-C-S--SCCCEE----------------
T ss_pred ecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCCCHHHHHHHHHHHhCCC-C-c--eeCCCC----------------
Confidence 79999999999 9888877654 9999999999999999999999999987 2 2 011110
Q ss_pred HHhCCCcccccccchhhHHHHHhhcccccccChhhH-----HhcCCCCcCChHHHHHHHHHHHHHCCCC
Q 045430 245 KENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKS-----KEHGFLGFRNSKNSFVNWIDKMKTYRIV 308 (309)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Ka-----r~lGf~p~~~~~~gl~~t~~~~r~~~~i 308 (309)
+ . ..+..+|++|+ +++||+|.++++++++++++||++.|++
T Consensus 274 ------~-~----------------~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 319 (330)
T 2pzm_A 274 ------A-P----------------GADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYGVT 319 (330)
T ss_dssp ------C-C----------------CTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred ------c-c----------------hhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHHhhCcc
Confidence 0 0 01346788888 8899999999999999999999999987
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-28 Score=224.88 Aligned_cols=228 Identities=13% Similarity=0.075 Sum_probs=164.9
Q ss_pred ccEEEEeecccCC---ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 13 VTHIFYVTWASRP---TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 13 vd~V~H~A~~~~~---~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
+|+|||+|+.... ...+ +++|+.||.|++++|.+. +++|||++||..+||.. ... ... |++|++ .
T Consensus 90 ~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~g~~--~~~---~~~-~~~E~~--~- 157 (333)
T 2q1w_A 90 PDAVVHTAASYKDPDDWYND-TLTNCVGGSNVVQAAKKN--NVGRFVYFQTALCYGVK--PIQ---QPV-RLDHPR--N- 157 (333)
T ss_dssp CSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGCSC--CCS---SSB-CTTSCC--C-
T ss_pred CcEEEECceecCCCccCChH-HHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCC--ccc---CCC-CcCCCC--C-
Confidence 8999999985332 1122 899999999999999886 68999999999999821 000 023 889987 2
Q ss_pred ccc-chHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHhCCceeecCCcccccccee
Q 045430 90 VTN-FYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSV 167 (309)
Q Consensus 90 ~p~-~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~ 167 (309)
|. +.|+..|...|...+..- .+++++||++||||+.. +..+. ++..+. .|. +++| +. +.++
T Consensus 158 -p~~~~Y~~sK~~~E~~~~~s~---~~~~ilR~~~v~gp~~~~~~~~~-----~~~~~~--~~~--~~~~-~~---~~~~ 220 (333)
T 2q1w_A 158 -PANSSYAISKSANEDYLEYSG---LDFVTFRLANVVGPRNVSGPLPI-----FFQRLS--EGK--KCFV-TK---ARRD 220 (333)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHT---CCEEEEEESEEESTTCCSSHHHH-----HHHHHH--TTC--CCEE-EE---CEEC
T ss_pred -CCCCchHHHHHHHHHHHHhhh---CCeEEEeeceEECcCCcCcHHHH-----HHHHHH--cCC--eeeC-CC---ceEe
Confidence 33 468888887776653202 27899999999999842 22211 112221 233 3344 44 6689
Q ss_pred ccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHh
Q 045430 168 ASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKEN 247 (309)
Q Consensus 168 ~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (309)
+++++|+|++++.++..+. |++|||++|+.+|+.|+++.|++.+|.+ ... ..|.+. .
T Consensus 221 ~i~v~Dva~ai~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~---~~~~~~-----~------------ 277 (333)
T 2q1w_A 221 FVFVKDLARATVRAVDGVG--HGAYHFSSGTDVAIKELYDAVVEAMALP-SYP---EPEIRE-----L------------ 277 (333)
T ss_dssp EEEHHHHHHHHHHHHTTCC--CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCC---CCEEEE-----C------------
T ss_pred eEEHHHHHHHHHHHHhcCC--CCEEEeCCCCCccHHHHHHHHHHHhCCC-Cce---eCCCCC-----c------------
Confidence 9999999999999887654 8999999999999999999999999987 321 122110 0
Q ss_pred CCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCCC
Q 045430 248 QLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309 (309)
Q Consensus 248 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~iP 309 (309)
. ...+ ..+..+|++|++++||+|.++++++++++++||++.|++|
T Consensus 278 -~-~~~~---------------~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~~~~ 322 (333)
T 2q1w_A 278 -G-PDDA---------------PSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSG 322 (333)
T ss_dssp -C-TTSC---------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred -c-cccc---------------cccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHHCCCC
Confidence 0 0000 1256899999988899999999999999999999999886
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=244.36 Aligned_cols=249 Identities=12% Similarity=0.061 Sum_probs=173.9
Q ss_pred CCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+.... ++.+++++|+.||.|++++|.+. + +||||+||.++||.. ...|++|++
T Consensus 381 ~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~--~-~r~V~~SS~~vyg~~---------~~~~~~E~~ 448 (660)
T 1z7e_A 381 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY--R-KRIIFPSTSEVYGMC---------SDKYFDEDH 448 (660)
T ss_dssp HHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT--T-CEEEEECCGGGGBTC---------CSSSBCTTT
T ss_pred cCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh--C-CEEEEEecHHHcCCC---------CCcccCCCc
Confidence 368999999985432 66778999999999999999886 5 899999999999864 245789988
Q ss_pred CC---CC--cccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc------hhHHHHHHHHHHHhHh
Q 045430 86 PR---LN--VTNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM------NVVGTLCVYAAICKHE 149 (309)
Q Consensus 86 p~---~p--~p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~------~~~~~~~i~~~l~~~~ 149 (309)
+. .| .|.+.|+ .|.++.+++.+ .+ ++++++||++||||+..... ...... +...+ ..
T Consensus 449 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~-~g---i~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~-~~~~~--~~ 521 (660)
T 1z7e_A 449 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK-EG---LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQ-LILNL--VE 521 (660)
T ss_dssp CCEEECCTTCTTHHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECSEESTTSSCHHHHTTTCSCHHHH-HHHHH--HH
T ss_pred cccccCcccCCCCCcHHHHHHHHHHHHHHHHH-cC---CCEEEECCCcccCCCccccccccccccchHHH-HHHHH--Hc
Confidence 63 11 1222344 55566555543 57 99999999999999864210 111111 11122 23
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC-cccHHHHHHHHHHHhccccCCCCCCCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD-VFKWKHLWKVLAEQFEIENYGLPQDGER 226 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~-~~s~~el~~~i~~~~G~~~~~~~~~~~~ 226 (309)
|.++.++|++. +.++++|++|+|++++.++..+. ..|++|||++++ ++|+.|+++.+++.+|.+..... .|
T Consensus 522 g~~~~~~g~g~---~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~---~p 595 (660)
T 1z7e_A 522 GSPIKLIDGGK---QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH---FP 595 (660)
T ss_dssp TCCEEEEGGGC---CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGG---SC
T ss_pred CCCcEEeCCCC---eEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccc---cC
Confidence 67777777776 67999999999999999887653 468999999997 89999999999999997543210 11
Q ss_pred CCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 227 VRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
............. ++..... ..+..+|++|+++ +||+|+++++++++++++||+++
T Consensus 596 ~~~~~~~~~~~~~-------~~~~~~~----------------~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~ 652 (660)
T 1z7e_A 596 PFAGFRVVESSSY-------YGKGYQD----------------VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 652 (660)
T ss_dssp CCCCEEEECTHHH-------HCTTCCC----------------CSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTT
T ss_pred ccccccchhcccc-------ccccccc----------------hhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhh
Confidence 1100000000000 0100000 1245789999987 79999999999999999999987
Q ss_pred CC
Q 045430 306 RI 307 (309)
Q Consensus 306 ~~ 307 (309)
..
T Consensus 653 ~~ 654 (660)
T 1z7e_A 653 VD 654 (660)
T ss_dssp SC
T ss_pred cc
Confidence 64
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.4e-28 Score=223.67 Aligned_cols=239 Identities=13% Similarity=0.098 Sum_probs=157.7
Q ss_pred CCccEEEEeecccC---CCh-HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCc-cccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR---PTE-AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGK-HYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~~~-~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~-vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+... .++ .+++++|+.||.|++++|.+.. +++||||+||.+ +||.+ ..+ ...|++|++
T Consensus 79 ~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~--~~~----~~~~~~E~~ 151 (338)
T 2rh8_A 79 AGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQ--LDG----TGLVVDEKN 151 (338)
T ss_dssp TTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHH--HTC----SCCCCCTTT
T ss_pred cCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCC--cCC----CCcccChhh
Confidence 46899999998422 233 3488999999999999998862 489999999987 45532 000 123788876
Q ss_pred CCC--------C---c-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 86 PRL--------N---V-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 86 p~~--------p---~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
+.. | . ..+|...|.++.++..+ .+ ++++++||++||||+.....+... .....+ ..|.+.
T Consensus 152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g---i~~~~lrp~~v~Gp~~~~~~~~~~--~~~~~~--~~g~~~ 223 (338)
T 2rh8_A 152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE-NN---IDLITVIPTLMAGSSLTSDVPSSI--GLAMSL--ITGNEF 223 (338)
T ss_dssp TTCC-------CCCCCCTTSCCHHHHHHHHHHHH-HT---CCEEEEEECEEESCCSSSSCCHHH--HHHHHH--HHTCHH
T ss_pred ccchhhccccCCccchHHHHHHHHHHHHHHHHHH-cC---CcEEEEeCCceECCCCCCCCCchH--HHHHHH--HcCCcc
Confidence 321 1 1 14567788888887653 57 999999999999998743222211 111111 123332
Q ss_pred eecCCccc---cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHH
Q 045430 154 LFPGSKDC---WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLE 230 (309)
Q Consensus 154 ~~~G~~~~---~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~ 230 (309)
.+ +.... .....+++||+|+|+++++++.++.. ++.||++++ .+|+.|+.+.|++.++... .|..+
T Consensus 224 ~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~~~-~~s~~e~~~~l~~~~~~~~-------~~~~~- 292 (338)
T 2rh8_A 224 LI-NGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESA-SGRYICCAA-NTSVPELAKFLSKRYPQYK-------VPTDF- 292 (338)
T ss_dssp HH-HHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTC-CEEEEECSE-EECHHHHHHHHHHHCTTSC-------CCCCC-
T ss_pred cc-ccccccccccCcccEEEHHHHHHHHHHHHcCCCc-CCcEEEecC-CCCHHHHHHHHHHhCCCCC-------CCCCC-
Confidence 22 21110 01234899999999999998876544 457999865 5899999999998775211 11110
Q ss_pred HHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCCC
Q 045430 231 EIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~iP 309 (309)
. .. ++. ....+|++|++++||+|+++++||++++++||++.|++|
T Consensus 293 ---~-------------~~-~~~-----------------~~~~~d~~k~~~lG~~p~~~l~~gl~~~~~~~~~~~~~~ 337 (338)
T 2rh8_A 293 ---G-------------DF-PPK-----------------SKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337 (338)
T ss_dssp ---T-------------TS-CSS-----------------CSCCCCCHHHHHHTCCCSCCHHHHHHHHHHHHHHTTCC-
T ss_pred ---C-------------CC-CcC-----------------cceeechHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 0 00 011 024689999977999999999999999999999999986
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=211.22 Aligned_cols=233 Identities=12% Similarity=0.018 Sum_probs=154.4
Q ss_pred CCccEEEEeecccC---CC-hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccc-cCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR---PT-EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHY-VGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~~-~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vY-G~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+... .+ ..+++++|+.||.|++++|.+. .+++||||+||..+| +.+ . ...|++|++
T Consensus 73 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~-~~~~~iV~~SS~~~~~~~~--~------~~~~~~e~~ 143 (322)
T 2p4h_X 73 EGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNS-KTVKRFIYTSSGSAVSFNG--K------DKDVLDESD 143 (322)
T ss_dssp TTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTC-SSCCEEEEEEEGGGTSCSS--S------CCSEECTTC
T ss_pred cCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccHHHcccCC--C------CCeecCCcc
Confidence 46899999997321 12 2458999999999999999876 258999999998854 432 0 134688876
Q ss_pred CCCC------cccc-hHHH-----HHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 86 PRLN------VTNF-YYTQ-----EDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 86 p~~p------~p~~-~y~~-----e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
+..+ .|.. .|+. |.++.++..+ .+ ++++++||++||||+......... .....+ ..|.+.
T Consensus 144 ~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~g---i~~~~lrp~~v~g~~~~~~~~~~~--~~~~~~--~~g~~~ 215 (322)
T 2p4h_X 144 WSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ-NG---IDVVTLILPFIVGRFVCPKLPDSI--EKALVL--VLGKKE 215 (322)
T ss_dssp CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH-TT---CCEEEEEECEEESCCCSSSCCHHH--HHHTHH--HHSCGG
T ss_pred ccchhhhcccCcccccHHHHHHHHHHHHHHHHHh-cC---CcEEEEcCCceECCCCCCCCCchH--HHHHHH--HhCCCc
Confidence 4321 1111 3554 4445554443 57 999999999999998643222111 011111 124443
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHH
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIM 233 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~ 233 (309)
.++ . . + .+++|++|+|+++++++..+...|+ || .+++.+|+.|+.+.|++.++.. . .|... ..
T Consensus 216 ~~~-~-~---~-~~~i~v~Dva~a~~~~~~~~~~~g~-~~-~~~~~~s~~e~~~~i~~~~~~~--~-----~~~~~--~~ 278 (322)
T 2p4h_X 216 QIG-V-T---R-FHMVHVDDVARAHIYLLENSVPGGR-YN-CSPFIVPIEEMSQLLSAKYPEY--Q-----ILTVD--EL 278 (322)
T ss_dssp GCC-E-E---E-EEEEEHHHHHHHHHHHHHSCCCCEE-EE-CCCEEEEHHHHHHHHHHHCTTS--C-----CCCTT--TT
T ss_pred cCc-C-C---C-cCEEEHHHHHHHHHHHhhCcCCCCC-EE-EcCCCCCHHHHHHHHHHhCCCC--C-----CCCCc--cc
Confidence 332 2 2 2 3899999999999998876555565 99 5568899999999998876421 1 11110 00
Q ss_pred hccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCC
Q 045430 234 RGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIV 308 (309)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~i 308 (309)
. +.. +. ....+|++|++++||+|++++++|++++++||++.|+|
T Consensus 279 ~-------------~~~-~~-----------------~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 322 (322)
T 2p4h_X 279 K-------------EIK-GA-----------------RLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322 (322)
T ss_dssp T-------------TCC-CE-----------------ECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHHHTCC
T ss_pred c-------------CCC-CC-----------------cceecccHHHHHhCCccCCCHHHHHHHHHHHHHhcCCC
Confidence 0 000 11 14578999998899999999999999999999998875
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.9e-27 Score=215.53 Aligned_cols=234 Identities=15% Similarity=0.125 Sum_probs=154.7
Q ss_pred CCccEEEEeecccC---CCh-HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCc-cccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR---PTE-AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGK-HYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~~~-~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~-vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+... .++ .+++++|+.||.|++++|.+.. .++||||+||.. +||.. . ...+++|++
T Consensus 76 ~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~~~~~----~----~~~~~~E~~ 146 (337)
T 2c29_D 76 KGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTVNIQE----H----QLPVYDESC 146 (337)
T ss_dssp TTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGTSCSS----S----CCSEECTTC
T ss_pred cCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhcccCC----C----CCcccCccc
Confidence 46899999998422 233 3588999999999999998862 389999999987 45532 1 134578886
Q ss_pred CCCC-------cccchHHH-----HHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 86 PRLN-------VTNFYYTQ-----EDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 86 p~~p-------~p~~~y~~-----e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
+..+ .|.+.|+. |.++.+++.. .+ ++++++||++||||+....+...... .+.. ..|.+.
T Consensus 147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g---i~~~~lrp~~v~Gp~~~~~~~~~~~~-~~~~---~~g~~~ 218 (337)
T 2c29_D 147 WSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE-NN---IDFITIIPTLVVGPFIMSSMPPSLIT-ALSP---ITGNEA 218 (337)
T ss_dssp CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH-HT---CCEEEEEECEEESCCSCSSCCHHHHH-HTHH---HHTCGG
T ss_pred CCchhhhcccCCccchHHHHHHHHHHHHHHHHHH-cC---CcEEEEeCCceECCCCCCCCCchHHH-HHHH---HcCCCc
Confidence 4221 02223554 5555554443 57 99999999999999864322221100 0000 123332
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHH
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIM 233 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~ 233 (309)
. .+.+. ...++|++|+|+++++++.++.. +..||++++ .+|+.|+.+.|++.++.. . .|..+
T Consensus 219 ~-~~~~~----~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~~~-~~s~~e~~~~i~~~~~~~--~-----~~~~~---- 280 (337)
T 2c29_D 219 H-YSIIR----QGQFVHLDDLCNAHIYLFENPKA-EGRYICSSH-DCIILDLAKMLREKYPEY--N-----IPTEF---- 280 (337)
T ss_dssp G-HHHHT----EEEEEEHHHHHHHHHHHHHCTTC-CEEEEECCE-EEEHHHHHHHHHHHCTTS--C-----CCSCC----
T ss_pred c-ccccC----CCCEEEHHHHHHHHHHHhcCccc-CceEEEeCC-CCCHHHHHHHHHHHCCCc--c-----CCCCC----
Confidence 1 22221 23599999999999998876544 457887764 589999999999877421 1 11110
Q ss_pred hccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHCCCCC
Q 045430 234 RGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309 (309)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~~~iP 309 (309)
. +. +... ....+|++|++++||+|+++++||++++++||++.|++|
T Consensus 281 ~-------------~~-~~~~----------------~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 326 (337)
T 2c29_D 281 K-------------GV-DENL----------------KSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLP 326 (337)
T ss_dssp T-------------TC-CTTC----------------CCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHHHTTSSC
T ss_pred C-------------cc-cCCC----------------ccccccHHHHHHcCCCcCCCHHHHHHHHHHHHHHcCCCC
Confidence 0 00 0111 145689999977899999999999999999999999886
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-26 Score=226.63 Aligned_cols=234 Identities=9% Similarity=-0.033 Sum_probs=153.8
Q ss_pred cCCCCccEEEEeecccC------CChHHHHHhHHHHHHHHHHH-hCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWASR------PTEAENCEVNGAMLRNVLRS-VIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~------~~~~~~~~vNv~gt~nll~a-~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
..++++|+|||+|+... .++.+++++|+.||+||+++ +++. +++||||+||..+||.. . ...|
T Consensus 197 ~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~--~~~r~V~~SS~~vyg~~--~------~~~~ 266 (516)
T 3oh8_A 197 DLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAEST--QCTTMISASAVGFYGHD--R------GDEI 266 (516)
T ss_dssp TTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCS--SCCEEEEEEEGGGGCSE--E------EEEE
T ss_pred HhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcC--CCCEEEEeCcceEecCC--C------CCCc
Confidence 35578999999998431 24566899999999999999 5443 78999999999999932 0 2457
Q ss_pred CCCCCCCCCcccchHHH-----HHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 81 FTEDLPRLNVTNFYYTQ-----EDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 81 ~~E~~p~~p~p~~~y~~-----e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
++|+++. |.++|+. |.++.. +. ..+ ++++|+||++||||+.+ ..+. +....+ .|... .
T Consensus 267 ~~E~~~~---~~~~y~~~~~~~E~~~~~-~~-~~g---i~~~ilRp~~v~Gp~~~-~~~~------~~~~~~-~g~~~-~ 329 (516)
T 3oh8_A 267 LTEESES---GDDFLAEVCRDWEHATAP-AS-DAG---KRVAFIRTGVALSGRGG-MLPL------LKTLFS-TGLGG-K 329 (516)
T ss_dssp ECTTSCC---CSSHHHHHHHHHHHTTHH-HH-HTT---CEEEEEEECEEEBTTBS-HHHH------HHHTTC----CC-C
T ss_pred cCCCCCC---CcChHHHHHHHHHHHHHH-HH-hCC---CCEEEEEeeEEECCCCC-hHHH------HHHHHH-hCCCc-c
Confidence 9999876 2334553 333322 23 257 99999999999999852 2221 111111 23332 4
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRG 235 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~ 235 (309)
.|++. +.++++|++|+|++++.++.++. .+++|||++++++|+.|+++.|++.+|.+...+ .|.++.+...
T Consensus 330 ~g~g~---~~~~~i~v~Dva~ai~~~l~~~~-~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~----~p~~~~~~~~- 400 (516)
T 3oh8_A 330 FGDGT---SWFSWIAIDDLTDIYYRAIVDAQ-ISGPINAVAPNPVSNADMTKILATSMHRPAFIQ----IPSLGPKILL- 400 (516)
T ss_dssp CTTSC---CEECEEEHHHHHHHHHHHHHCTT-CCEEEEESCSCCEEHHHHHHHTTC------------------------
T ss_pred cCCCC---ceEceEeHHHHHHHHHHHHhCcc-cCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCC----CCHHHHHHHh-
Confidence 57777 66999999999999999998765 356999999999999999999999999764211 2222211110
Q ss_pred cHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCC-hHHHHHHHHHHH
Q 045430 236 KEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRN-SKNSFVNWIDKM 302 (309)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~-~~~gl~~t~~~~ 302 (309)
| ...... .+ ..+..++.+|++++||+|+++ ++++|++++++.
T Consensus 401 ------------g--~~~~~~--------~~---~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 401 ------------G--SQGAEE--------LA---LASQRTAPAALENLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp ----------------CCGGG--------GG---GCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTCC
T ss_pred ------------C--CchhHH--------Hh---hcCCeechHHHHHCCCCCCCCCHHHHHHHHhCcc
Confidence 0 000000 00 125578899999999999997 999999998753
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-26 Score=209.27 Aligned_cols=235 Identities=11% Similarity=0.006 Sum_probs=159.2
Q ss_pred CCCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 10 ~~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
++++|+|||+|+.. ..++.+++++|+.||.|++++|.+.. +++||||+||..+||... .. ....|++|++..
T Consensus 81 ~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~iv~~SS~~~~~~~~--~~---~~~~~~~E~~~~ 154 (342)
T 1y1p_A 81 IKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSSTVSALIPK--PN---VEGIYLDEKSWN 154 (342)
T ss_dssp TTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECCGGGTCCCC--TT---CCCCEECTTCCC
T ss_pred HcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCC-CCcEEEEeccHHHhcCCC--CC---CCCcccCccccC
Confidence 45789999999843 23778899999999999999997532 689999999999997530 00 012678998721
Q ss_pred -------------CCc-ccc-----hHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchh-HHHHHHHHHHH
Q 045430 88 -------------LNV-TNF-----YYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNV-VGTLCVYAAIC 146 (309)
Q Consensus 88 -------------~p~-p~~-----~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~-~~~~~i~~~l~ 146 (309)
.|. |.+ |...|.++..++.+. .+ ++++++||++||||........ .... +...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~---~~~~~~rp~~v~g~~~~~~~~~~~~~~-~~~~~- 229 (342)
T 1y1p_A 155 LESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPH---FTLNAVLPNYTIGTIFDPETQSGSTSG-WMMSL- 229 (342)
T ss_dssp HHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCS---SEEEEEEESEEECCCSCTTTCCCHHHH-HHHHH-
T ss_pred chhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCC---ceEEEEcCCceECCCCCCCCCCccHHH-HHHHH-
Confidence 111 323 444555555555421 25 8999999999999976432110 1111 11122
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCC
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGER 226 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~ 226 (309)
..|.++.+.|++ +.++++|++|+|++++.++.++...|+.| +.+|+.+|+.|+.+.|++.+|.+ ..+ .+
T Consensus 230 -~~~~~~~~~~~~----~~~~~v~v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~-~~~----~~ 298 (342)
T 1y1p_A 230 -FNGEVSPALALM----PPQYYVSAVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK-TFP----AD 298 (342)
T ss_dssp -HTTCCCHHHHTC----CSEEEEEHHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS-CCC----CC
T ss_pred -HcCCCccccccC----CcCCEeEHHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc-cCC----CC
Confidence 135565545543 45799999999999999887765567655 45677899999999999999965 111 10
Q ss_pred CCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCC---CCcCChHHHHHHHHHHH
Q 045430 227 VRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGF---LGFRNSKNSFVNWIDKM 302 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf---~p~~~~~~gl~~t~~~~ 302 (309)
. . . ... ....+|++|+++ +|| .+..++++|++++++||
T Consensus 299 ~------~-------------~--~~~-----------------~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~ 340 (342)
T 1y1p_A 299 F------P-------------D--QGQ-----------------DLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSE 340 (342)
T ss_dssp C------C-------------C--CCC-----------------CCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCS
T ss_pred C------C-------------c--ccc-----------------ccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHh
Confidence 0 0 0 000 023679999987 587 57789999999999998
Q ss_pred HH
Q 045430 303 KT 304 (309)
Q Consensus 303 r~ 304 (309)
++
T Consensus 341 ~~ 342 (342)
T 1y1p_A 341 TA 342 (342)
T ss_dssp CC
T ss_pred hC
Confidence 63
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=208.70 Aligned_cols=249 Identities=15% Similarity=-0.009 Sum_probs=162.1
Q ss_pred CCCCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
...++|+|||+|+.. ..++.+.+++|+.||.|++++|.+ +++||||+||.++ |..... . ....|++|+++
T Consensus 147 ~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~-G~~~~~-~---~~~~~~~E~~~ 218 (427)
T 4f6c_A 147 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GTYFDI-D---TEDVTFSEADV 218 (427)
T ss_dssp CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGG-GSEECS-S---CSCCEECTTCS
T ss_pred CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHh-CCCccC-C---CCCcccccccc
Confidence 456899999999843 236778999999999999999987 4799999999999 653111 0 13568999997
Q ss_pred CCCc-ccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcch-----hHHHHHHHHHHHhHhCCceee
Q 045430 87 RLNV-TNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMN-----VVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 87 ~~p~-p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~-----~~~~~~i~~~l~~~~g~~~~~ 155 (309)
..+. |.+.|+ .|.+++++.. .+ ++++|+||++||||+....+. .... .+...+ ..+.+++.
T Consensus 219 ~~~~~~~~~Y~~sK~~~E~~~~~~~~--~g---~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~ 290 (427)
T 4f6c_A 219 YKGQLLTSPYTRSKFYSELKVLEAVN--NG---LDGRIVRVGNLTSPYNGRWHMRNIKTNRFS-MVMNDL--LQLDCIGV 290 (427)
T ss_dssp CSSCCCCSHHHHHHHHHHHHHHHHHH--TT---CCEEEEEECCEESCSSSCCCCTTGGGCHHH-HHHHHH--HHSSEEEH
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHHH--cC---CCEEEEeCCeeecCCCCCccccCcchHHHH-HHHHHH--HhcCCCCC
Confidence 5443 433454 5555555432 57 999999999999998753211 0110 111111 12444443
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRG 235 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+.+. +.+++++++|+|++++.++..+. .|++|||++++++||.|+++.|++ +|.+. +++..|.
T Consensus 291 -~~~~---~~~~~v~v~DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g~~~---------~~~~~~~-- 353 (427)
T 4f6c_A 291 -SMAE---MPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KEIEL---------VSDESFN-- 353 (427)
T ss_dssp -HHHT---CEECCEEHHHHHHHHHHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SCCEE---------ECHHHHH--
T ss_pred -cccc---ceEEEeeHHHHHHHHHHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cCCcc---------cCHHHHH--
Confidence 3333 67899999999999999988766 899999999999999999999998 77221 2222232
Q ss_pred cHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhH----HhcCCCCcCChHHHHHHHHHHHHH
Q 045430 236 KEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKS----KEHGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Ka----r~lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
......++.+ +.. +. .+.. ......+|.++. +++||++....++.+++.++++++
T Consensus 354 ------~~l~~~~~~~--~~~---~~-~~~~--~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~ 412 (427)
T 4f6c_A 354 ------EILQKQDMYE--TIG---LT-SVDR--EQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT 412 (427)
T ss_dssp ------HHHHHTTCHH--HHH---HH-HHHH--TSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred ------HHHHhcCchh--hhh---hh-hccc--cCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 2222223221 110 00 0100 112344555554 557999888888899999998876
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=210.29 Aligned_cols=249 Identities=14% Similarity=-0.030 Sum_probs=160.6
Q ss_pred CCCCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
...++|+|||+|+.. ..++.++.++|+.||+|++++|.+ +.+||||+||.++ |..... . ....|++|+++
T Consensus 228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~v-G~~~~~-~---~~~~~~~E~~~ 299 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GTYFDI-D---TEDVTFSEADV 299 (508)
T ss_dssp CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCT-TSEECT-T---CSCCEECTTCS
T ss_pred CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhh-ccCCcc-C---CcCcccccccc
Confidence 456899999999843 236778999999999999999987 4699999999999 643111 0 13568999987
Q ss_pred CCCc-ccc-----hHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcch-----hHHHHHHHHHHHhHhCCceee
Q 045430 87 RLNV-TNF-----YYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMN-----VVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 87 ~~p~-p~~-----~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~-----~~~~~~i~~~l~~~~g~~~~~ 155 (309)
..+. |.. |+.+|+++.++.. .+ ++++|+||++|||++.+..+. ... ..+...+ ..+..++.
T Consensus 300 ~~~~~~~~~Y~~sK~~~E~~~~~~~~--~g---i~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~i~~~--~~~~~~~~ 371 (508)
T 4f6l_B 300 YKGQLLTSPYTRSKFYSELKVLEAVN--NG---LDGRIVRVGNLTSPYNGRWHMRNIKTNRF-SMVMNDL--LQLDCIGV 371 (508)
T ss_dssp CSSBCCCSHHHHHHHHHHHHHHHHHH--TT---CEEEEEEECCEESCSSSCCCCTTCTTCHH-HHHHHHH--TTCSEEET
T ss_pred cccccCCCcHHHHHHHHHHHHHHHHH--cC---CCEEEEecceeccCCCCCcccCCcchHHH-HHHHHHH--HHcCCCCC
Confidence 5433 333 3455666655433 57 999999999999998754311 111 1111111 12333433
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRG 235 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+++. +.+++++|+|+|++++.++..+. .|++|||++++++||.|+++.|++.. .+ ++++..|..
T Consensus 372 -~~g~---~~~~~v~v~DvA~ai~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~-~~---------~~~~~~w~~- 435 (508)
T 4f6l_B 372 -SMAE---MPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE-IE---------LVSDESFNE- 435 (508)
T ss_dssp -TGGG---SEEECEEHHHHHHHHHHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC-CE---------EECHHHHHH-
T ss_pred -CccC---ceEEEEcHHHHHHHHHHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC-Cc---------ccCHHHHHH-
Confidence 3344 67999999999999999988765 78999999999999999999998765 22 122323332
Q ss_pred cHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhh----HHhcCCCCcCChHHHHHHHHHHHHH
Q 045430 236 KEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNK----SKEHGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~K----ar~lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.....++. ++.. +.. +.. ......+|.++ ++++||++....++.+++.++++++
T Consensus 436 -------~l~~~~~~--~~~~---~~~-~~~--~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~ 493 (508)
T 4f6l_B 436 -------ILQKQDMY--ETIG---LTS-VDR--EQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT 493 (508)
T ss_dssp -------HHHTTCCH--HHHH---HHH-TGG--GSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHH
T ss_pred -------HHHhcCCc--cchh---ccc-ccc--cCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence 22222221 1100 000 000 01234455554 4567999998889999999999876
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=191.81 Aligned_cols=209 Identities=11% Similarity=0.032 Sum_probs=153.7
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+... .++++.+++|+.|+.|++++|++. +. |||++||..+|+.. ..|++|+++
T Consensus 57 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~iv~~SS~~~~~~~----------~~~~~e~~~ 123 (273)
T 2ggs_A 57 RPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI--DS-YIVHISTDYVFDGE----------KGNYKEEDI 123 (273)
T ss_dssp CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TC-EEEEEEEGGGSCSS----------SCSBCTTSC
T ss_pred CCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh--CC-eEEEEecceeEcCC----------CCCcCCCCC
Confidence 4899999998543 267788999999999999999886 45 89999999999853 338999987
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
..| .+.|+..|...|...+ . ++++++||++||| +.+.... +...+ ..+.++.+.|+ .+
T Consensus 124 ~~~--~~~Y~~sK~~~e~~~~--~---~~~~~iR~~~v~G--~~~~~~~-----~~~~~--~~~~~~~~~~~------~~ 181 (273)
T 2ggs_A 124 PNP--INYYGLSKLLGETFAL--Q---DDSLIIRTSGIFR--NKGFPIY-----VYKTL--KEGKTVFAFKG------YY 181 (273)
T ss_dssp CCC--SSHHHHHHHHHHHHHC--C---TTCEEEEECCCBS--SSSHHHH-----HHHHH--HTTCCEEEESC------EE
T ss_pred CCC--CCHHHHHHHHHHHHHh--C---CCeEEEecccccc--ccHHHHH-----HHHHH--HcCCCEEeecC------CC
Confidence 553 4569999988887763 3 6789999999998 3333221 11122 23566666554 37
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHH
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKE 246 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (309)
++++++|+|++++.++.++. +++|||++ +.+|+.|+.+.+++.+|.+.... .+.++. .
T Consensus 182 ~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~----~~~~~~---~------------ 239 (273)
T 2ggs_A 182 SPISARKLASAILELLELRK--TGIIHVAG-ERISRFELALKIKEKFNLPGEVK----EVDEVR---G------------ 239 (273)
T ss_dssp CCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCEEHHHHHHHHHHHTTCCSCEE----EESSCT---T------------
T ss_pred CceEHHHHHHHHHHHHhcCc--CCeEEECC-CcccHHHHHHHHHHHhCCChhhc----cccccc---c------------
Confidence 89999999999999887653 55999999 99999999999999999775421 111110 0
Q ss_pred hCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCC-cCChHHHH
Q 045430 247 NQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLG-FRNSKNSF 295 (309)
Q Consensus 247 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p-~~~~~~gl 295 (309)
..+.. ..+..+|++|+++ +||+| .+++++++
T Consensus 240 --~~~~~----------------~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 240 --WIAKR----------------PYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp --CCSCC----------------CSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred --cccCC----------------CcccccCHHHHHHHhCCCCCCccccccc
Confidence 00000 1245799999997 79999 68998875
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.4e-24 Score=206.07 Aligned_cols=190 Identities=15% Similarity=0.051 Sum_probs=133.1
Q ss_pred CccEEEEeecc-cCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCc
Q 045430 12 DVTHIFYVTWA-SRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNV 90 (309)
Q Consensus 12 ~vd~V~H~A~~-~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~ 90 (309)
++|+|||+|+. ...++.+.+++|+.||.|++++|.+. +++||||+||.++||.. ...+++|+.+..|.
T Consensus 167 ~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~--~~~~~V~iSS~~v~~~~---------~~~~~~E~~~~~p~ 235 (478)
T 4dqv_A 167 TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTT--KLKPFTYVSTADVGAAI---------EPSAFTEDADIRVI 235 (478)
T ss_dssp HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSS--SCCCEEEEEEGGGGTTS---------CTTTCCSSSCHHHH
T ss_pred CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEeehhhcCcc---------CCCCcCCccccccc
Confidence 68999999984 33466778999999999999999986 78999999999999864 25578888764332
Q ss_pred -c-------------cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccC-CCcchhHHHHHHHHHHHhHhCC-cee
Q 045430 91 -T-------------NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSP-YSMMNVVGTLCVYAAICKHEGV-PLL 154 (309)
Q Consensus 91 -p-------------~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~-~~~~~~~~~~~i~~~l~~~~g~-~~~ 154 (309)
+ .+|+..|.++++++.+ .+ ++++|+||++|||++. +...+....+..+...+...|. |..
T Consensus 236 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g---i~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~ 311 (478)
T 4dqv_A 236 SPTRTVDGGWAGGYGTSKWAGEVLLREANDL-CA---LPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRS 311 (478)
T ss_dssp CCEEECCTTSEECHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESC
T ss_pred CcccccccccccchHHHHHHHHHHHHHHHHH-hC---CCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCccccc
Confidence 1 1234455555555543 47 9999999999999865 2211111111111111222343 222
Q ss_pred ecC---CccccccceeccCHHHHHHHHHHHhcC----CCCCCcceeecCCCc--ccHHHHHHHHHHHhcccc
Q 045430 155 FPG---SKDCWEGYSVASDADLIAEQHIWAAVD----PYARNEAFNCSNGDV--FKWKHLWKVLAEQFEIEN 217 (309)
Q Consensus 155 ~~G---~~~~~~~~~~~~~vd~la~a~i~aa~~----~~a~g~~fNI~~g~~--~s~~el~~~i~~~~G~~~ 217 (309)
+++ +|....+.+++++|||+|++++.++.+ +...|++|||+++++ +||.|+++.|+++ |.+.
T Consensus 312 ~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~ 382 (478)
T 4dqv_A 312 FYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPI 382 (478)
T ss_dssp SBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSC
T ss_pred ccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCc
Confidence 222 221112678999999999999998875 556789999999988 9999999999995 7554
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=180.82 Aligned_cols=222 Identities=10% Similarity=0.118 Sum_probs=145.0
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++++|+|||+|+... + .++|+.+|.|++++|++. +++||||+||..+|.. .
T Consensus 64 ~~~~d~vi~~a~~~~-~----~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~-----------~----------- 114 (287)
T 2jl1_A 64 FAGVSKLLFISGPHY-D----NTLLIVQHANVVKAARDA--GVKHIAYTGYAFAEES-----------I----------- 114 (287)
T ss_dssp TTTCSEEEECCCCCS-C----HHHHHHHHHHHHHHHHHT--TCSEEEEEEETTGGGC-----------C-----------
T ss_pred HhcCCEEEEcCCCCc-C----chHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCCC-----------C-----------
Confidence 457899999998532 1 168999999999999886 7999999999977631 1
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
. .|...|...|...+..+ ++++++||+.++|+.....+. ..+ + .+.. .+ +.+. +.++++
T Consensus 115 ~---~y~~~K~~~E~~~~~~~---~~~~ilrp~~~~~~~~~~~~~--------~~~-~-~~~~-~~-~~~~---~~~~~i 173 (287)
T 2jl1_A 115 I---PLAHVHLATEYAIRTTN---IPYTFLRNALYTDFFVNEGLR--------AST-E-SGAI-VT-NAGS---GIVNSV 173 (287)
T ss_dssp S---THHHHHHHHHHHHHHTT---CCEEEEEECCBHHHHSSGGGH--------HHH-H-HTEE-EE-SCTT---CCBCCB
T ss_pred C---chHHHHHHHHHHHHHcC---CCeEEEECCEeccccchhhHH--------HHh-h-CCce-ec-cCCC---CccCcc
Confidence 0 24444444443322357 999999999998875222211 111 1 2332 23 3333 558999
Q ss_pred CHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCC
Q 045430 170 DADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQL 249 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 249 (309)
|++|+|++++.++.++...|++|||++++.+|+.|+.+.+++.+|.+... .+.+...+. ......++
T Consensus 174 ~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-----~~~~~~~~~--------~~~~~~~~ 240 (287)
T 2jl1_A 174 TRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVH-----QPVSFEEEK--------NFLVNAGV 240 (287)
T ss_dssp CHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEE-----EECCHHHHH--------HHHHHTTC
T ss_pred CHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcceE-----EeCCHHHHH--------HHHHhCCC
Confidence 99999999999888766678999999999999999999999999976432 122221111 11111122
Q ss_pred CcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHH
Q 045430 250 QLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWID 300 (309)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~ 300 (309)
. +.+.+... .+... +. ..+..+|++|+++ +| |.++++|+++++++
T Consensus 241 ~-~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 241 P-EPFTEITA-AIYDA-IS-KGEASKTSDDLQKLIG--SLTPLKETVKQALK 286 (287)
T ss_dssp C-HHHHHHHH-HHHHH-HH-TTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred C-HHHHHHHH-HHHHH-Hh-CCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence 1 11110000 00111 11 1245678999988 69 88899999999876
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4e-22 Score=186.85 Aligned_cols=173 Identities=15% Similarity=-0.006 Sum_probs=134.9
Q ss_pred CccEEEEeeccc-CCChHHHHHhHHHHHHHHHHHhCcCCCCCc-eEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS-RPTEAENCEVNGAMLRNVLRSVIPNAPNLR-HVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 12 ~vd~V~H~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~-r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++|+|||+|+.. ..++.+++++|+.+|+|++++|++. +++ ||||+||..+|+.. +
T Consensus 46 ~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~v~~Ss~~~~~~~---------------------~ 102 (369)
T 3st7_A 46 KADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRN--TKKPAILLSSSIQATQDN---------------------P 102 (369)
T ss_dssp HCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTC--SSCCEEEEEEEGGGGSCS---------------------H
T ss_pred cCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEeCchhhcCCC---------------------C
Confidence 689999999954 4467889999999999999999987 677 99999999888621 0
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
-..+|...|+++++++.+ .+ ++++|+||++||||+....++.+....+ ..+ ..|.++.+ +++. +.++++
T Consensus 103 Y~~sK~~~E~~~~~~~~~-~g---~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~--~~~~~~~~-~~~~---~~~~~i 171 (369)
T 3st7_A 103 YGESKLQGEQLLREYAEE-YG---NTVYIYRWPNLFGKWCKPNYNSVIATFC-YKI--ARNEEIQV-NDRN---VELTLN 171 (369)
T ss_dssp HHHHHHHHHHHHHHHHHH-HC---CCEEEEEECEEECTTCCTTSSCHHHHHH-HHH--HTTCCCCC-SCTT---CEEEEE
T ss_pred chHHHHHHHHHHHHHHHH-hC---CCEEEEECCceeCCCCCCCcchHHHHHH-HHH--HcCCCeEe-cCCC---eEEEEE
Confidence 024678888888888774 57 9999999999999987432222221111 122 13566655 3554 678999
Q ss_pred CHHHHHHHHHHHhcCCCCC-CcceeecCCCcccHHHHHHHHHHHhccccC
Q 045430 170 DADLIAEQHIWAAVDPYAR-NEAFNCSNGDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~a~-g~~fNI~~g~~~s~~el~~~i~~~~G~~~~ 218 (309)
+++|+|++++.++.++... |++|||++++.+|+.|+++.+++.+|.+..
T Consensus 172 ~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~ 221 (369)
T 3st7_A 172 YVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLD 221 (369)
T ss_dssp EHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence 9999999999999877554 899999999999999999999999998754
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=176.74 Aligned_cols=223 Identities=11% Similarity=0.072 Sum_probs=137.7
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++++|+|||+|+... ..|+.+|+|++++|++. +++|||++||..+|.. .. +
T Consensus 63 ~~~~d~vi~~a~~~~-------~~~~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~-----------~~---------~ 113 (286)
T 2zcu_A 63 LQGVEKLLLISSSEV-------GQRAPQHRNVINAAKAA--GVKFIAYTSLLHADTS-----------PL---------G 113 (286)
T ss_dssp TTTCSEEEECC---------------CHHHHHHHHHHHH--TCCEEEEEEETTTTTC-----------CS---------T
T ss_pred HhCCCEEEEeCCCCc-------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCCC-----------cc---------h
Confidence 457899999998531 25899999999999987 6999999999877621 10 1
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
-..+|...|+++++ .+ ++++++||+.++|+.. ..+ ...+ + .+ ++.+ +++. +.++++
T Consensus 114 y~~sK~~~e~~~~~-----~~---~~~~ilrp~~~~~~~~-~~~--------~~~~-~-~~-~~~~-~~~~---~~~~~i 169 (286)
T 2zcu_A 114 LADEHIETEKMLAD-----SG---IVYTLLRNGWYSENYL-ASA--------PAAL-E-HG-VFIG-AAGD---GKIASA 169 (286)
T ss_dssp THHHHHHHHHHHHH-----HC---SEEEEEEECCBHHHHH-TTH--------HHHH-H-HT-EEEE-SCTT---CCBCCB
T ss_pred hHHHHHHHHHHHHH-----cC---CCeEEEeChHHhhhhH-HHh--------HHhh-c-CC-ceec-cCCC---Cccccc
Confidence 01345555665542 47 9999999977665432 111 1111 1 12 3443 3444 568999
Q ss_pred CHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCC
Q 045430 170 DADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQL 249 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 249 (309)
+++|+|++++.++.++...|++|||++++.+|+.|+.+.+++.+|.+... .+.+...+.. .....++
T Consensus 170 ~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-----~~~~~~~~~~--------~~~~~~~ 236 (286)
T 2zcu_A 170 TRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTY-----QNLSEADFAA--------ALKSVGL 236 (286)
T ss_dssp CHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEE-----EECCHHHHHH--------HHTTSSC
T ss_pred cHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCce-----eeCCHHHHHH--------HHHHcCC
Confidence 99999999999988766678999999999999999999999999976432 1222211110 0000111
Q ss_pred CcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHH
Q 045430 250 QLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMK 303 (309)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r 303 (309)
. +.+.+.. -.+... +. .-...+|.+|+++ +|| |.++++|+++++++||.
T Consensus 237 ~-~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~lg~-~~~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 237 P-DGLADML-ADSDVG-AS-KGGLFDDSKTLSKLIGH-PTTTLAESVSHLFNVNN 286 (286)
T ss_dssp C-HHHHHHH-HHHHHH-HH-TTTTCCCCCHHHHHHTS-CCCCHHHHHHGGGC---
T ss_pred C-HHHHHHH-HHHHHH-Hh-CCCCccCchHHHHHhCc-CCCCHHHHHHHHHhhcC
Confidence 1 1110000 000111 11 1134678999988 697 66799999999999974
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.85 E-value=9.2e-22 Score=171.69 Aligned_cols=155 Identities=10% Similarity=0.015 Sum_probs=111.2
Q ss_pred CCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCc
Q 045430 11 TDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNV 90 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~ 90 (309)
+++|+|||+|+....+ .+++++|+.++.|++++|++. +++||||+||..+|+.. .....|+.+..|
T Consensus 66 ~~~d~vi~~a~~~~~~-~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~----------~~~~~~~~~~~p- 131 (227)
T 3dhn_A 66 KGADAVISAFNPGWNN-PDIYDETIKVYLTIIDGVKKA--GVNRFLMVGGAGSLFIA----------PGLRLMDSGEVP- 131 (227)
T ss_dssp TTCSEEEECCCC-------CCSHHHHHHHHHHHHHHHT--TCSEEEEECCSTTSEEE----------TTEEGGGTTCSC-
T ss_pred cCCCEEEEeCcCCCCC-hhHHHHHHHHHHHHHHHHHHh--CCCEEEEeCChhhccCC----------CCCccccCCcch-
Confidence 4689999999854333 348899999999999999987 68999999999988643 222345555443
Q ss_pred ccchHHHHHHHHH-----HHHhcCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCCceeec-CCccccc
Q 045430 91 TNFYYTQEDILFE-----EVEKRKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGVPLLFP-GSKDCWE 163 (309)
Q Consensus 91 p~~~y~~e~~~~~-----~~~~~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~~~~~~-G~~~~~~ 163 (309)
.+.|+..|...| +.. ..+ ++|+++||++||||++.. .+. .+...+++ |++
T Consensus 132 -~~~Y~~sK~~~e~~~~~~~~-~~~---~~~~ilrp~~v~g~~~~~~~~~--------------~~~~~~~~~~~~---- 188 (227)
T 3dhn_A 132 -ENILPGVKALGEFYLNFLMK-EKE---IDWVFFSPAADMRPGVRTGRYR--------------LGKDDMIVDIVG---- 188 (227)
T ss_dssp -GGGHHHHHHHHHHHHHTGGG-CCS---SEEEEEECCSEEESCCCCCCCE--------------EESSBCCCCTTS----
T ss_pred -HHHHHHHHHHHHHHHHHHhh-ccC---ccEEEEeCCcccCCCcccccee--------------ecCCCcccCCCC----
Confidence 344665555544 332 357 999999999999998742 221 12222333 332
Q ss_pred cceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHH
Q 045430 164 GYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKH 204 (309)
Q Consensus 164 ~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~e 204 (309)
+++++++|+|++++.++.++...||+||++++++.+|++
T Consensus 189 --~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 189 --NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHHH 227 (227)
T ss_dssp --CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC---
T ss_pred --CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcccCC
Confidence 799999999999999999998899999999999999864
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.7e-20 Score=170.74 Aligned_cols=231 Identities=10% Similarity=0.020 Sum_probs=148.6
Q ss_pred CccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCcc
Q 045430 12 DVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNVT 91 (309)
Q Consensus 12 ~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~p 91 (309)
++|+|||+|+. .|+.+++|++++|++.+ +++|||+ | +||. +.+|+.+..|.
T Consensus 83 ~~d~Vi~~a~~----------~n~~~~~~l~~aa~~~g-~v~~~v~-S---~~g~-------------~~~e~~~~~p~- 133 (346)
T 3i6i_A 83 EIDIVVSTVGG----------ESILDQIALVKAMKAVG-TIKRFLP-S---EFGH-------------DVNRADPVEPG- 133 (346)
T ss_dssp TCCEEEECCCG----------GGGGGHHHHHHHHHHHC-CCSEEEC-S---CCSS-------------CTTTCCCCTTH-
T ss_pred CCCEEEECCch----------hhHHHHHHHHHHHHHcC-CceEEee-c---ccCC-------------CCCccCcCCCc-
Confidence 78999999985 39999999999999872 3999996 3 5763 25566654432
Q ss_pred cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccCH
Q 045430 92 NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDA 171 (309)
Q Consensus 92 ~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~v 171 (309)
..|...|...|...+..+ ++|+++||+++||....+..... .....+..++++|++. +.++++++
T Consensus 134 -~~y~~sK~~~e~~l~~~g---~~~tivrpg~~~g~~~~~~~~~~--------~~~~~~~~~~~~g~g~---~~~~~i~~ 198 (346)
T 3i6i_A 134 -LNMYREKRRVRQLVEESG---IPFTYICCNSIASWPYYNNIHPS--------EVLPPTDFFQIYGDGN---VKAYFVAG 198 (346)
T ss_dssp -HHHHHHHHHHHHHHHHTT---CCBEEEECCEESSCCCSCC-------------CCCCSSCEEEETTSC---CCEEEECH
T ss_pred -chHHHHHHHHHHHHHHcC---CCEEEEEecccccccCccccccc--------cccCCCceEEEccCCC---ceEEecCH
Confidence 346666665554443467 99999999999997643322110 0011244577888887 67999999
Q ss_pred HHHHHHHHHHhcCCCCCCcceeecC-CCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCCC
Q 045430 172 DLIAEQHIWAAVDPYARNEAFNCSN-GDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQ 250 (309)
Q Consensus 172 d~la~a~i~aa~~~~a~g~~fNI~~-g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 250 (309)
+|+|++++.++.++...|++||+.+ |+.+|+.|+++.+++.+|.+... ...+...+.. ..+..+.
T Consensus 199 ~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~-----~~~~~~~~~~--------~~~~~~~- 264 (346)
T 3i6i_A 199 TDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPR-----VTVTEDDLLA--------AAGENII- 264 (346)
T ss_dssp HHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCE-----EEECHHHHHH--------HHHTCCT-
T ss_pred HHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCce-----EecCHHHHHH--------HHhcCCC-
Confidence 9999999999988777789999984 68999999999999999987542 2223322221 1111111
Q ss_pred cccccccchhhHHHHHhhcccccccCh-----hhHHh-c-CCCCcCChHHHHHHHHHHHHHC
Q 045430 251 LTKLSEVAVWWFADMMLDGGFLLLDSM-----NKSKE-H-GFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~d~-----~Kar~-l-Gf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+.. ..+.++..++.......+++ .++++ . ++++. +++|.+++.++|++++
T Consensus 265 --p~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~ 321 (346)
T 3i6i_A 265 --PQS--VVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEK 321 (346)
T ss_dssp --THH--HHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC----
T ss_pred --hhh--hHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhcc
Confidence 110 00112222222111112344 34655 4 88775 8999999999999864
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-18 Score=161.18 Aligned_cols=168 Identities=14% Similarity=0.032 Sum_probs=121.1
Q ss_pred CCCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
++++|+|||+|+... .++.+++++|+.||.|++++|.+. +++|||++||.++|. |.
T Consensus 89 ~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~--~v~~~V~~SS~~~~~--------------p~--- 149 (344)
T 2gn4_A 89 LEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN--AISQVIALSTDKAAN--------------PI--- 149 (344)
T ss_dssp TTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEECCGGGSS--------------CC---
T ss_pred HhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEecCCccCC--------------Cc---
Confidence 457899999998543 256789999999999999999987 699999999975542 10
Q ss_pred CCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC-ceeecCCccc
Q 045430 85 LPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV-PLLFPGSKDC 161 (309)
Q Consensus 85 ~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~-~~~~~G~~~~ 161 (309)
.+-..+|...|+++..+... ..+ ++++++||++||||+. +..+ .+....+ .|. ++++. ++.
T Consensus 150 ---~~Y~~sK~~~E~~~~~~~~~~~~~g---~~~~~vRpg~v~g~~~-~~i~------~~~~~~~-~g~~~~~i~-~~~- 213 (344)
T 2gn4_A 150 ---NLYGATKLCSDKLFVSANNFKGSSQ---TQFSVVRYGNVVGSRG-SVVP------FFKKLVQ-NKASEIPIT-DIR- 213 (344)
T ss_dssp ---SHHHHHHHHHHHHHHHGGGCCCSSC---CEEEEECCCEETTCTT-SHHH------HHHHHHH-HTCCCEEES-CTT-
T ss_pred ---cHHHHHHHHHHHHHHHHHHHhCCCC---cEEEEEEeccEECCCC-CHHH------HHHHHHH-cCCCceEEe-CCC-
Confidence 00013445555555554431 146 9999999999999874 2222 1212112 366 67765 444
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccc
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIE 216 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~ 216 (309)
..+++++++|+|++++.++.++ ..|++||++++ .+|+.|+++.+++.++.+
T Consensus 214 --~~r~~i~v~D~a~~v~~~l~~~-~~g~~~~~~~~-~~s~~el~~~i~~~~~~~ 264 (344)
T 2gn4_A 214 --MTRFWITLDEGVSFVLKSLKRM-HGGEIFVPKIP-SMKMTDLAKALAPNTPTK 264 (344)
T ss_dssp --CEEEEECHHHHHHHHHHHHHHC-CSSCEEEECCC-EEEHHHHHHHHCTTCCEE
T ss_pred --eEEeeEEHHHHHHHHHHHHhhc-cCCCEEecCCC-cEEHHHHHHHHHHhCCee
Confidence 5689999999999999988764 46899999776 699999999998776554
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.8e-19 Score=153.99 Aligned_cols=153 Identities=8% Similarity=0.052 Sum_probs=113.8
Q ss_pred CCCccEEEEeeccc-CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS-RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
++++|+|||+|+.. ..++++.+++|+.++.|++++|++. +++|||++||...+.. |..+
T Consensus 82 ~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~----------------~~~~-- 141 (236)
T 3e8x_A 82 FASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDP----------------DQGP-- 141 (236)
T ss_dssp GTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCG----------------GGSC--
T ss_pred HcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCC----------------CCCh--
Confidence 45789999999954 4578889999999999999999887 6899999999432211 1111
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceec
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA 168 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~ 168 (309)
.+.+.|...|...|...+..+ ++++++||+.|||+.....+ ...+++. ..+++
T Consensus 142 -~~~~~Y~~sK~~~e~~~~~~g---i~~~~lrpg~v~~~~~~~~~--------------------~~~~~~~---~~~~~ 194 (236)
T 3e8x_A 142 -MNMRHYLVAKRLADDELKRSS---LDYTIVRPGPLSNEESTGKV--------------------TVSPHFS---EITRS 194 (236)
T ss_dssp -GGGHHHHHHHHHHHHHHHHSS---SEEEEEEECSEECSCCCSEE--------------------EEESSCS---CCCCC
T ss_pred -hhhhhHHHHHHHHHHHHHHCC---CCEEEEeCCcccCCCCCCeE--------------------EeccCCC---cccCc
Confidence 223356666665554433467 99999999999998653321 1112222 34789
Q ss_pred cCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHH
Q 045430 169 SDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLA 210 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~ 210 (309)
++++|+|++++.++.++...|++|||++| .+|+.|+++.|+
T Consensus 195 i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 195 ITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp EEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred EeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHHHHHHHhc
Confidence 99999999999999877677999999988 599999998775
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.7e-19 Score=158.02 Aligned_cols=160 Identities=13% Similarity=-0.043 Sum_probs=123.6
Q ss_pred CCccEEEEeeccc-CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
+++|+|||+|+.. ..++.+.+++|+.++.|+++++.+. +++||||+||..+||.. . ...|++|++|..|
T Consensus 62 ~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~----~----~~~~~~E~~~~~~ 131 (267)
T 3ay3_A 62 KDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNL--GKPRIVFASSNHTIGYY----P----RTTRIDTEVPRRP 131 (267)
T ss_dssp TTCSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHT--TCCEEEEEEEGGGSTTS----B----TTSCBCTTSCCCC
T ss_pred cCCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCHHHhCCC----C----CCCCCCCCCCCCC
Confidence 4689999999954 3467889999999999999999876 68999999999999853 0 2468999998765
Q ss_pred c-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 90 V-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 90 ~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
. + .+|+..|.+++.+..+ .+ ++++++||++||+ .+. ++. ..+
T Consensus 132 ~~~Y~~sK~~~e~~~~~~~~~-~g---i~~~~lrp~~v~~-~~~---------------------------~~~---~~~ 176 (267)
T 3ay3_A 132 DSLYGLSKCFGEDLASLYYHK-FD---IETLNIRIGSCFP-KPK---------------------------DAR---MMA 176 (267)
T ss_dssp CSHHHHHHHHHHHHHHHHHHT-TC---CCEEEEEECBCSS-SCC---------------------------SHH---HHH
T ss_pred CChHHHHHHHHHHHHHHHHHH-cC---CCEEEEeceeecC-CCC---------------------------CCC---eee
Confidence 4 2 3345566666665553 57 9999999999994 211 111 346
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhcccc
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIEN 217 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~ 217 (309)
++++++|+|++++.++.++...+++||+.++...+|.++.+. +.+|.+.
T Consensus 177 ~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~lg~~p 225 (267)
T 3ay3_A 177 TWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTESWWDNDKS--AFLGWVP 225 (267)
T ss_dssp HBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCSSCCBCCGGG--GGGCCCC
T ss_pred ccccHHHHHHHHHHHHhCCCCCceeEecCCCccccccCHHHH--HHcCCCC
Confidence 889999999999998887655568999998888888888776 7788653
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.5e-19 Score=153.57 Aligned_cols=151 Identities=9% Similarity=0.019 Sum_probs=115.1
Q ss_pred cCCCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
+.++++|+|||+|+.... +.+++|+.++.|++++|++. +++|||++||..+|+. .|.+| .+
T Consensus 59 ~~~~~~d~vi~~ag~~~~---~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~------------~~~~e-~~- 119 (219)
T 3dqp_A 59 KQLHGMDAIINVSGSGGK---SLLKVDLYGAVKLMQAAEKA--EVKRFILLSTIFSLQP------------EKWIG-AG- 119 (219)
T ss_dssp TTTTTCSEEEECCCCTTS---SCCCCCCHHHHHHHHHHHHT--TCCEEEEECCTTTTCG------------GGCCS-HH-
T ss_pred HHHcCCCEEEECCcCCCC---CcEeEeHHHHHHHHHHHHHh--CCCEEEEECcccccCC------------Ccccc-cc-
Confidence 356689999999996543 37889999999999999886 6899999999876652 24555 22
Q ss_pred CCcccchHHHHHHHHHHHH-hcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 88 LNVTNFYYTQEDILFEEVE-KRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 88 ~p~p~~~y~~e~~~~~~~~-~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
+.|.+.|...|...|... +..+ ++|+++||++|||+.....+ .+ |+ ..+
T Consensus 120 -~~~~~~Y~~sK~~~e~~~~~~~~---i~~~ilrp~~v~g~~~~~~~--------------------~~-~~-----~~~ 169 (219)
T 3dqp_A 120 -FDALKDYYIAKHFADLYLTKETN---LDYTIIQPGALTEEEATGLI--------------------DI-ND-----EVS 169 (219)
T ss_dssp -HHHTHHHHHHHHHHHHHHHHSCC---CEEEEEEECSEECSCCCSEE--------------------EE-SS-----SCC
T ss_pred -cccccHHHHHHHHHHHHHHhccC---CcEEEEeCceEecCCCCCcc--------------------cc-CC-----CcC
Confidence 124445777666655544 3467 99999999999998653221 12 22 558
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHH
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKV 208 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~ 208 (309)
++++++|+|++++.++.++...|++|||++|+ .+++|+...
T Consensus 170 ~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~~~ 210 (219)
T 3dqp_A 170 ASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEALES 210 (219)
T ss_dssp CCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHHHT
T ss_pred CcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHHHH
Confidence 99999999999999998876779999999886 888888764
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-18 Score=149.83 Aligned_cols=160 Identities=11% Similarity=0.075 Sum_probs=108.4
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++++|+|||+|+.... .+..++|+.+|+|++++|++. + +|||++||.++|+.. . + ....+.+|+.. |
T Consensus 60 ~~~~d~vi~~ag~~~~--~~~~~~n~~~~~~l~~a~~~~--~-~~~v~~SS~~~~~~~--~-~---~~~~~~~~~~~--~ 126 (224)
T 3h2s_A 60 LDSVDAVVDALSVPWG--SGRGYLHLDFATHLVSLLRNS--D-TLAVFILGSASLAMP--G-A---DHPMILDFPES--A 126 (224)
T ss_dssp HTTCSEEEECCCCCTT--SSCTHHHHHHHHHHHHTCTTC--C-CEEEEECCGGGSBCT--T-C---SSCGGGGCCGG--G
T ss_pred cccCCEEEECCccCCC--cchhhHHHHHHHHHHHHHHHc--C-CcEEEEecceeeccC--C-C---CccccccCCCC--C
Confidence 4578999999996422 124688999999999999987 6 899999998666532 0 1 01224444443 3
Q ss_pred cccchHHHHHHHHHHH---HhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 90 VTNFYYTQEDILFEEV---EKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~---~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
.|.+.|...|...|.. .+..+ ++|+++||++||||++...+.. ...++++++ +.+
T Consensus 127 ~~~~~y~~sK~~~e~~~~~~~~~~---i~~~ivrp~~v~g~~~~~~~~~-------------~~~~~~~~~------~~~ 184 (224)
T 3h2s_A 127 ASQPWYDGALYQYYEYQFLQMNAN---VNWIGISPSEAFPSGPATSYVA-------------GKDTLLVGE------DGQ 184 (224)
T ss_dssp GGSTTHHHHHHHHHHHHHHTTCTT---SCEEEEEECSBCCCCCCCCEEE-------------ESSBCCCCT------TSC
T ss_pred ccchhhHHHHHHHHHHHHHHhcCC---CcEEEEcCccccCCCcccCcee-------------cccccccCC------CCC
Confidence 3455677776665533 12356 9999999999999966322210 122333322 336
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHH
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKH 204 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~e 204 (309)
++++++|+|++++.++.++...||+||+++-+..++.+
T Consensus 185 ~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~~~~ 222 (224)
T 3h2s_A 185 SHITTGNMALAILDQLEHPTAIRDRIVVRDADLEHHHH 222 (224)
T ss_dssp CBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC------
T ss_pred ceEeHHHHHHHHHHHhcCccccCCEEEEecCcchhccc
Confidence 89999999999999999988889999999988777654
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.7e-18 Score=146.97 Aligned_cols=159 Identities=13% Similarity=0.066 Sum_probs=89.5
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++++|+|||+|+.... ..++|+.+|+|++++|++. +++|||++||..+|... . ...+..|+.+..|
T Consensus 59 ~~~~d~vi~~ag~~~~----~~~~~~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~--~------~~~~~~~~~~~~~ 124 (221)
T 3ew7_A 59 LSDQNVVVDAYGISPD----EAEKHVTSLDHLISVLNGT--VSPRLLVVGGAASLQID--E------DGNTLLESKGLRE 124 (221)
T ss_dssp HTTCSEEEECCCSSTT----TTTSHHHHHHHHHHHHCSC--CSSEEEEECCCC---------------------------
T ss_pred hcCCCEEEECCcCCcc----ccchHHHHHHHHHHHHHhc--CCceEEEEecceEEEcC--C------CCccccccCCCCC
Confidence 4578999999996432 3578999999999999987 68999999998776432 0 1336677776554
Q ss_pred c-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 90 V-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 90 ~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
. . .+|...|.+ ........+ ++|+++||++||||++... .|. ..+.++.+.+++.
T Consensus 125 ~~~y~~~k~~~e~~-~~~~~~~~g---i~~~ivrp~~v~g~~~~~~--------~~~----~~~~~~~~~~~~~------ 182 (221)
T 3ew7_A 125 APYYPTARAQAKQL-EHLKSHQAE---FSWTYISPSAMFEPGERTG--------DYQ----IGKDHLLFGSDGN------ 182 (221)
T ss_dssp CCCSCCHHHHHHHH-HHHHTTTTT---SCEEEEECSSCCCCC--------------------------------------
T ss_pred HHHHHHHHHHHHHH-HHHHhhccC---ccEEEEeCcceecCCCccC--------ceE----eccccceecCCCC------
Confidence 4 1 334555554 222210257 9999999999999954211 011 1123445555543
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHH
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKH 204 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~e 204 (309)
++++++|+|++++.++.++...||+||+++....+.+|
T Consensus 183 ~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 183 SFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH 220 (221)
T ss_dssp -CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred ceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence 67899999999999999888889999999988877654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-18 Score=153.04 Aligned_cols=159 Identities=9% Similarity=-0.088 Sum_probs=120.3
Q ss_pred CCccEEEEeeccc-CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
+++|+|||+|+.. ..++++.+++|+.||.|+++++++. +++|||++||..+||.. . ...+++|+.|..|
T Consensus 63 ~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~g~~----~----~~~~~~e~~~~~~ 132 (267)
T 3rft_A 63 AGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTIGYY----P----QTERLGPDVPARP 132 (267)
T ss_dssp TTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGTTS----B----TTSCBCTTSCCCC
T ss_pred cCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcchHHhCCC----C----CCCCCCCCCCCCC
Confidence 3689999999964 4477889999999999999999886 68999999999999853 1 2558999988665
Q ss_pred cc---cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 90 VT---NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 90 ~p---~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
.. .+|...|.+++.++.+ .+ +++++|||++|||+. +++. ..+
T Consensus 133 ~~~Y~~sK~~~e~~~~~~a~~-~g---~~~~~vr~~~v~~~~----------------------------~~~~---~~~ 177 (267)
T 3rft_A 133 DGLYGVSKCFGENLARMYFDK-FG---QETALVRIGSCTPEP----------------------------NNYR---MLS 177 (267)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECBCSSSC----------------------------CSTT---HHH
T ss_pred CChHHHHHHHHHHHHHHHHHH-hC---CeEEEEEeecccCCC----------------------------CCCC---cee
Confidence 41 3345556666666654 67 999999999999862 1122 345
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccc
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIE 216 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~ 216 (309)
++++++|+++++..++..+...+.++|+.++++.+|.++... +.+|..
T Consensus 178 ~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~g~~ 225 (267)
T 3rft_A 178 TWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGWWDNSHL--GFLGWK 225 (267)
T ss_dssp HBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCCBCCGGG--GGGCCC
T ss_pred eEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCcccChhH--HHCCCC
Confidence 778999999999888887766667888888777777665332 566653
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.5e-17 Score=146.00 Aligned_cols=159 Identities=15% Similarity=0.161 Sum_probs=111.7
Q ss_pred CCCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
.++++|+|||+|+..... ..|+.+++|++++|++. +++||||+|| ||.. ...|.
T Consensus 62 ~~~~~d~vi~~a~~~~~~-----~~~~~~~~~l~~aa~~~--gv~~iv~~Ss---~~~~---------~~~~~------- 115 (289)
T 3e48_A 62 AFKGMDTVVFIPSIIHPS-----FKRIPEVENLVYAAKQS--GVAHIIFIGY---YADQ---------HNNPF------- 115 (289)
T ss_dssp HTTTCSEEEECCCCCCSH-----HHHHHHHHHHHHHHHHT--TCCEEEEEEE---SCCS---------TTCCS-------
T ss_pred HHhCCCEEEEeCCCCccc-----hhhHHHHHHHHHHHHHc--CCCEEEEEcc---cCCC---------CCCCC-------
Confidence 345789999999854332 45999999999999987 7999999999 4421 01111
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceec
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA 168 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~ 168 (309)
+.+++. .++.++..+ .+ ++|+++||+++||+.. .. +..+.+ .+. + +.+.+. +.+++
T Consensus 116 --~~~~~~--~~~e~~~~~-~g---~~~~ilrp~~~~~~~~----~~------~~~~~~-~~~-~-~~~~g~---~~~~~ 171 (289)
T 3e48_A 116 --HMSPYF--GYASRLLST-SG---IDYTYVRMAMYMDPLK----PY------LPELMN-MHK-L-IYPAGD---GRINY 171 (289)
T ss_dssp --TTHHHH--HHHHHHHHH-HC---CEEEEEEECEESTTHH----HH------HHHHHH-HTE-E-CCCCTT---CEEEE
T ss_pred --ccchhH--HHHHHHHHH-cC---CCEEEEeccccccccH----HH------HHHHHH-CCC-E-ecCCCC---ceeee
Confidence 111111 122222332 57 9999999999999632 11 112212 222 2 234444 66899
Q ss_pred cCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccC
Q 045430 169 SDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~ 218 (309)
++++|+|++++.++..+...|++|||+ ++.+|+.|+++.|++.+|.+..
T Consensus 172 i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~ 220 (289)
T 3e48_A 172 ITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEASGTEIK 220 (289)
T ss_dssp ECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCE
T ss_pred EEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCcee
Confidence 999999999999998776569999999 9999999999999999997644
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-17 Score=144.51 Aligned_cols=164 Identities=12% Similarity=0.032 Sum_probs=114.1
Q ss_pred CCccEEEEeecccCC-----------Ch-------HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccC
Q 045430 11 TDVTHIFYVTWASRP-----------TE-------AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-----------~~-------~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
+++|+|||+|+.... ++ .+.+++|+.++.|+++++++. +++|||++||..+|..
T Consensus 68 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~------ 139 (253)
T 1xq6_A 68 QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTNP------ 139 (253)
T ss_dssp TTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTCT------
T ss_pred cCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc--CCCEEEEEcCccCCCC------
Confidence 468999999984311 11 235799999999999999887 6899999999876531
Q ss_pred CCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 73 KIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
..|.. +-..+.|...|...|...+..+ ++++++||+.|||+..... ... .....+
T Consensus 140 -----~~~~~------~~~~~~y~~sK~~~e~~~~~~~---i~~~~vrpg~v~~~~~~~~-~~~----------~~~~~~ 194 (253)
T 1xq6_A 140 -----DHPLN------KLGNGNILVWKRKAEQYLADSG---TPYTIIRAGGLLDKEGGVR-ELL----------VGKDDE 194 (253)
T ss_dssp -----TCGGG------GGGGCCHHHHHHHHHHHHHTSS---SCEEEEEECEEECSCSSSS-CEE----------EESTTG
T ss_pred -----CCccc------cccchhHHHHHHHHHHHHHhCC---CceEEEecceeecCCcchh-hhh----------ccCCcC
Confidence 11111 1112346666665554443467 9999999999999865311 100 001111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCC---cccHHHHHHHHHHHhcc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGD---VFKWKHLWKVLAEQFEI 215 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~---~~s~~el~~~i~~~~G~ 215 (309)
+++. ..++++++|+|++++.++.++...|++|||++++ ++|+.|+++.+++.+|.
T Consensus 195 --~~~~------~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 195 --LLQT------DTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp --GGGS------SCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred --CcCC------CCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 2222 2468899999999999887765678999999864 59999999999998885
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=3.1e-17 Score=141.38 Aligned_cols=143 Identities=12% Similarity=0.084 Sum_probs=107.1
Q ss_pred ccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 13 VTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 13 vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
+|+|||+|+... .++++++++|+.++.+++++|++. +++|||++||..+|+.+
T Consensus 66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~---------------------- 121 (215)
T 2a35_A 66 IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADAKS---------------------- 121 (215)
T ss_dssp CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTTC----------------------
T ss_pred hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc--CCCEEEEECCcccCCCC----------------------
Confidence 899999998532 477889999999999999999886 68999999999888631
Q ss_pred cccchHHHHHHHHHHHHhcCCCccee-EEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCCceeecCCcccccccee
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLT-WSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSV 167 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~-~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~ 167 (309)
.+.|...|...|...+..+ ++ ++++||+.||||+... .... + .+...++ +++ .++
T Consensus 122 --~~~y~~sK~~~e~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~---------~---~~~~~~~-~~~-----~~~ 178 (215)
T 2a35_A 122 --SIFYNRVKGELEQALQEQG---WPQLTIARPSLLFGPREEFRLAEI---------L---AAPIARI-LPG-----KYH 178 (215)
T ss_dssp --SSHHHHHHHHHHHHHTTSC---CSEEEEEECCSEESTTSCEEGGGG---------T---TCCCC-----C-----HHH
T ss_pred --ccHHHHHHHHHHHHHHHcC---CCeEEEEeCceeeCCCCcchHHHH---------H---HHhhhhc-cCC-----CcC
Confidence 1247777777776654457 99 9999999999997642 2111 1 1111222 222 368
Q ss_pred ccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHH
Q 045430 168 ASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKH 204 (309)
Q Consensus 168 ~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~e 204 (309)
+++++|+|++++.++.++. +++|||++++..+|.+
T Consensus 179 ~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~~~~~~ 213 (215)
T 2a35_A 179 GIEACDLARALWRLALEEG--KGVRFVESDELRKLGK 213 (215)
T ss_dssp HHHHHHHHHHHHHHHTCCC--SEEEEEEHHHHHHHHH
T ss_pred cEeHHHHHHHHHHHHhcCC--CCceEEcHHHHHHhhc
Confidence 9999999999999988764 8899999988876643
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.4e-16 Score=147.27 Aligned_cols=163 Identities=10% Similarity=-0.004 Sum_probs=111.1
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCC-CceEEEEeCCc--cccCCccccCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPN-LRHVCLQTGGK--HYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~-v~r~v~~Ss~~--vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++++|+|||+|+.... +.|+.+ +|++++|++. + ++||||+||.. .||.. +
T Consensus 71 ~~~~d~Vi~~a~~~~~------~~~~~~-~~l~~aa~~~--g~v~~~V~~SS~~~~~~~~~------------------~ 123 (352)
T 1xgk_A 71 FEGAHLAFINTTSQAG------DEIAIG-KDLADAAKRA--GTIQHYIYSSMPDHSLYGPW------------------P 123 (352)
T ss_dssp HTTCSEEEECCCSTTS------CHHHHH-HHHHHHHHHH--SCCSEEEEEECCCGGGTSSC------------------C
T ss_pred HhcCCEEEEcCCCCCc------HHHHHH-HHHHHHHHHc--CCccEEEEeCCccccccCCC------------------C
Confidence 3568999999874321 358877 9999999987 6 89999999985 34310 0
Q ss_pred CCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc-chhHHHHHHHHHHHhHhCCc-eeecCCcccccc
Q 045430 87 RLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM-MNVVGTLCVYAAICKHEGVP-LLFPGSKDCWEG 164 (309)
Q Consensus 87 ~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~~~~i~~~l~~~~g~~-~~~~G~~~~~~~ 164 (309)
..+-..+|+..|++++ ..+ ++++|+||+ +||++.... .+... ......|.. +.++|++. +
T Consensus 124 ~~~y~~sK~~~E~~~~-----~~g---i~~~ivrpg-~~g~~~~~~~~~~~~------~~~~~~g~~~~~~~~~~~---~ 185 (352)
T 1xgk_A 124 AVPMWAPKFTVENYVR-----QLG---LPSTFVYAG-IYNNNFTSLPYPLFQ------MELMPDGTFEWHAPFDPD---I 185 (352)
T ss_dssp CCTTTHHHHHHHHHHH-----TSS---SCEEEEEEC-EEGGGCBSSSCSSCB------EEECTTSCEEEEESSCTT---S
T ss_pred CccHHHHHHHHHHHHH-----HcC---CCEEEEecc-eecCCchhccccccc------ccccCCCceEEeeccCCC---C
Confidence 0000123444555443 347 999999975 899977422 11100 000012333 23466655 6
Q ss_pred ceeccCH-HHHHHHHHHHhcCCC--CCCcceeecCCCcccHHHHHHHHHHHhccccC
Q 045430 165 YSVASDA-DLIAEQHIWAAVDPY--ARNEAFNCSNGDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 165 ~~~~~~v-d~la~a~i~aa~~~~--a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~ 218 (309)
.++++++ +|+|++++.++.++. ..|++|||++ +.+|+.|+.+.|++.+|.+..
T Consensus 186 ~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~ 241 (352)
T 1xgk_A 186 PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVT 241 (352)
T ss_dssp CEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred ceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCc
Confidence 6899999 999999999887642 3689999996 679999999999999998754
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=6.8e-16 Score=140.56 Aligned_cols=170 Identities=9% Similarity=0.058 Sum_probs=116.9
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCC-CceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPN-LRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~-v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
++++|+|||+|+....+ .|+.+++|++++|+++ + ++|||+ ++||.. ...+ +.+..
T Consensus 74 ~~~~d~vi~~a~~~~~~------~~~~~~~~l~~aa~~~--g~v~~~v~----S~~g~~---------~~~~---~~~~~ 129 (313)
T 1qyd_A 74 LKQVDVVISALAGGVLS------HHILEQLKLVEAIKEA--GNIKRFLP----SEFGMD---------PDIM---EHALQ 129 (313)
T ss_dssp HTTCSEEEECCCCSSSS------TTTTTHHHHHHHHHHS--CCCSEEEC----SCCSSC---------TTSC---CCCCS
T ss_pred HhCCCEEEECCccccch------hhHHHHHHHHHHHHhc--CCCceEEe----cCCcCC---------cccc---ccCCC
Confidence 34689999999854332 4899999999999987 5 999985 367742 0111 22222
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceec
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA 168 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~ 168 (309)
|. ...| .+|...|...+..+ ++|+++||+.++|+....+..... .....+..+.++|++. +.+++
T Consensus 130 p~-~~~y-~sK~~~e~~~~~~g---~~~~ilrp~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~---~~~~~ 194 (313)
T 1qyd_A 130 PG-SITF-IDKRKVRRAIEAAS---IPYTYVSSNMFAGYFAGSLAQLDG-------HMMPPRDKVLIYGDGN---VKGIW 194 (313)
T ss_dssp ST-THHH-HHHHHHHHHHHHTT---CCBCEEECCEEHHHHTTTSSCTTC-------CSSCCSSEECCBTTSC---SEEEE
T ss_pred CC-cchH-HHHHHHHHHHHhcC---CCeEEEEeceeccccccccccccc-------cccCCCCeEEEeCCCC---ceEEE
Confidence 21 2356 66655554433367 999999999999864322211000 0000133456677776 66899
Q ss_pred cCHHHHHHHHHHHhcCCCCCCcceeecC-CCcccHHHHHHHHHHHhccccC
Q 045430 169 SDADLIAEQHIWAAVDPYARNEAFNCSN-GDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~~a~g~~fNI~~-g~~~s~~el~~~i~~~~G~~~~ 218 (309)
++++|+|++++.++.++...|++|++.+ ++.+|+.|+++.+++.+|.+..
T Consensus 195 i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 245 (313)
T 1qyd_A 195 VDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLD 245 (313)
T ss_dssp ECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred EEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCc
Confidence 9999999999998887766688888875 5789999999999999997654
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-15 Score=138.82 Aligned_cols=166 Identities=11% Similarity=-0.082 Sum_probs=114.1
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++++|+|||+|+.... ...+.|+.+++|++++|++. +++|||++||..+|+.. . +.+
T Consensus 70 ~~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~~aa~~~--gv~~iv~~S~~~~~~~~----------~-----~~~--- 126 (299)
T 2wm3_A 70 LNGAYATFIVTNYWES---CSQEQEVKQGKLLADLARRL--GLHYVVYSGLENIKKLT----------A-----GRL--- 126 (299)
T ss_dssp HTTCSEEEECCCHHHH---TCHHHHHHHHHHHHHHHHHH--TCSEEEECCCCCHHHHT----------T-----TSC---
T ss_pred HhcCCEEEEeCCCCcc---ccchHHHHHHHHHHHHHHHc--CCCEEEEEcCccccccC----------C-----Ccc---
Confidence 3468999999974211 12467899999999999887 79999998888888632 1 111
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc--eeecCCcccccccee
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP--LLFPGSKDCWEGYSV 167 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~--~~~~G~~~~~~~~~~ 167 (309)
+. .|...|...|...+..+ ++|++|||+++||+....+.... ...|.. +.++ .+. ..++
T Consensus 127 -~~-~y~~sK~~~e~~~~~~g---i~~~ilrp~~~~~~~~~~~~~~~----------~~~g~~~~~~~~-~~~---~~~~ 187 (299)
T 2wm3_A 127 -AA-AHFDGKGEVEEYFRDIG---VPMTSVRLPCYFENLLSHFLPQK----------APDGKSYLLSLP-TGD---VPMD 187 (299)
T ss_dssp -CC-HHHHHHHHHHHHHHHHT---CCEEEEECCEEGGGGGTTTCCEE----------CTTSSSEEECCC-CTT---SCEE
T ss_pred -cC-chhhHHHHHHHHHHHCC---CCEEEEeecHHhhhchhhcCCcc----------cCCCCEEEEEec-CCC---Cccc
Confidence 11 23344443333322247 99999999999997543221100 112322 2233 233 5589
Q ss_pred ccCHHHHHHHHHHHhcCC-CCCCcceeecCCCcccHHHHHHHHHHHhccccC
Q 045430 168 ASDADLIAEQHIWAAVDP-YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 168 ~~~vd~la~a~i~aa~~~-~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~ 218 (309)
+++++|+|++++.++.++ ...|++||+++ +.+|+.|+.+.+++.+|.+..
T Consensus 188 ~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~ 238 (299)
T 2wm3_A 188 GMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVH 238 (299)
T ss_dssp EECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEE
T ss_pred eecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCce
Confidence 999999999999888764 24689999986 689999999999999998754
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.9e-15 Score=125.84 Aligned_cols=139 Identities=14% Similarity=0.102 Sum_probs=98.0
Q ss_pred CCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCc
Q 045430 11 TDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNV 90 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~ 90 (309)
+++|+|||+|+.... .+..++|+.++.|+++++++. +++|||++||..+|+.. ...|.
T Consensus 66 ~~~d~vi~~a~~~~~--~~~~~~n~~~~~~~~~~~~~~--~~~~~v~~Ss~~~~~~~---------~~~~~--------- 123 (206)
T 1hdo_A 66 AGQDAVIVLLGTRND--LSPTTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDP---------TKVPP--------- 123 (206)
T ss_dssp TTCSEEEECCCCTTC--CSCCCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCT---------TCSCG---------
T ss_pred cCCCEEEECccCCCC--CCccchHHHHHHHHHHHHHHh--CCCeEEEEeeeeeccCc---------ccccc---------
Confidence 467999999985432 123469999999999999987 68999999999999853 11111
Q ss_pred ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 91 TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 91 p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
+.+.|..+|...|...+..+ ++|+++||+.| |+++.. .+ ...+.+.. . .+++
T Consensus 124 ~~~~y~~~K~~~e~~~~~~~---i~~~~lrp~~~-~~~~~~~~~------------------~~~~~~~~----~-~~~i 176 (206)
T 1hdo_A 124 RLQAVTDDHIRMHKVLRESG---LKYVAVMPPHI-GDQPLTGAY------------------TVTLDGRG----P-SRVI 176 (206)
T ss_dssp GGHHHHHHHHHHHHHHHHTC---SEEEEECCSEE-ECCCCCSCC------------------EEESSSCS----S-CSEE
T ss_pred cchhHHHHHHHHHHHHHhCC---CCEEEEeCCcc-cCCCCCcce------------------EecccCCC----C-CCcc
Confidence 23457777665554433367 99999999997 554421 11 00111111 0 3788
Q ss_pred CHHHHHHHHHHHhcCCCCCCcceeecCCC
Q 045430 170 DADLIAEQHIWAAVDPYARNEAFNCSNGD 198 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~a~g~~fNI~~g~ 198 (309)
+++|+|++++.++.++...|++|||++|.
T Consensus 177 ~~~Dva~~~~~~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 177 SKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp EHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred CHHHHHHHHHHHhcCccccccceeeeccc
Confidence 99999999999888776779999999875
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.6e-15 Score=132.56 Aligned_cols=164 Identities=9% Similarity=0.063 Sum_probs=112.8
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCC-CceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPN-LRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~-v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
++++|+|||+|+... +.++.|++++|+++ + ++|||+ ++||.. .+|+.+..
T Consensus 74 ~~~~d~vi~~a~~~~----------~~~~~~l~~aa~~~--g~v~~~v~----S~~g~~-------------~~~~~~~~ 124 (307)
T 2gas_A 74 IKQVDIVICAAGRLL----------IEDQVKIIKAIKEA--GNVKKFFP----SEFGLD-------------VDRHDAVE 124 (307)
T ss_dssp HTTCSEEEECSSSSC----------GGGHHHHHHHHHHH--CCCSEEEC----SCCSSC-------------TTSCCCCT
T ss_pred HhCCCEEEECCcccc----------cccHHHHHHHHHhc--CCceEEee----cccccC-------------cccccCCC
Confidence 346899999998532 56789999999887 5 999983 357732 12333333
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceec
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA 168 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~ 168 (309)
|. .+.| .+|...+...+..+ ++|+++||+.++|+...+...... . ...+..+.++|++. +.+++
T Consensus 125 p~-~~~y-~sK~~~e~~~~~~~---i~~~~lrp~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~---~~~~~ 188 (307)
T 2gas_A 125 PV-RQVF-EEKASIRRVIEAEG---VPYTYLCCHAFTGYFLRNLAQLDA------T--DPPRDKVVILGDGN---VKGAY 188 (307)
T ss_dssp TH-HHHH-HHHHHHHHHHHHHT---CCBEEEECCEETTTTGGGTTCTTC------S--SCCSSEEEEETTSC---SEEEE
T ss_pred cc-hhHH-HHHHHHHHHHHHcC---CCeEEEEcceeecccccccccccc------c--cCCCCeEEEecCCC---cceEE
Confidence 32 2346 56654444332357 999999999998854221111000 0 00133456677766 66899
Q ss_pred cCHHHHHHHHHHHhcCCCCCCcceeecC-CCcccHHHHHHHHHHHhccccC
Q 045430 169 SDADLIAEQHIWAAVDPYARNEAFNCSN-GDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~~a~g~~fNI~~-g~~~s~~el~~~i~~~~G~~~~ 218 (309)
++++|+|++++.++.++...|++|++.+ ++.+|+.|+++.+++.+|.+..
T Consensus 189 i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 239 (307)
T 2gas_A 189 VTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLE 239 (307)
T ss_dssp ECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCE
T ss_pred eeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCc
Confidence 9999999999998887666688888875 5789999999999999997654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.6e-15 Score=136.40 Aligned_cols=163 Identities=9% Similarity=0.066 Sum_probs=113.6
Q ss_pred CCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCC-CceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPN-LRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~-v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
+++|+|||+|+.. ++.+++|++++|+++ + ++|||+ ++||.. .+|+.+..|
T Consensus 76 ~~~d~vi~~a~~~----------~~~~~~~l~~aa~~~--g~v~~~v~----S~~g~~-------------~~~~~~~~p 126 (308)
T 1qyc_A 76 KNVDVVISTVGSL----------QIESQVNIIKAIKEV--GTVKRFFP----SEFGND-------------VDNVHAVEP 126 (308)
T ss_dssp HTCSEEEECCCGG----------GSGGGHHHHHHHHHH--CCCSEEEC----SCCSSC-------------TTSCCCCTT
T ss_pred cCCCEEEECCcch----------hhhhHHHHHHHHHhc--CCCceEee----cccccC-------------ccccccCCc
Confidence 4689999999843 256789999999987 5 999984 347632 233343333
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
. ...| .+|...+...+..+ ++|+++||+.++|+.......... .+ ..+..+.++|++. +.++++
T Consensus 127 ~-~~~y-~sK~~~e~~~~~~~---~~~~~~r~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~---~~~~~i 190 (308)
T 1qyc_A 127 A-KSVF-EVKAKVRRAIEAEG---IPYTYVSSNCFAGYFLRSLAQAGL------TA--PPRDKVVILGDGN---ARVVFV 190 (308)
T ss_dssp H-HHHH-HHHHHHHHHHHHHT---CCBEEEECCEEHHHHTTTTTCTTC------SS--CCSSEEEEETTSC---CEEEEE
T ss_pred c-hhHH-HHHHHHHHHHHhcC---CCeEEEEeceeccccccccccccc------cC--CCCCceEEecCCC---ceEEEe
Confidence 2 2346 56654444432357 999999999999875432211100 00 0133566777776 678999
Q ss_pred CHHHHHHHHHHHhcCCCCCCcceeecC-CCcccHHHHHHHHHHHhccccC
Q 045430 170 DADLIAEQHIWAAVDPYARNEAFNCSN-GDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~a~g~~fNI~~-g~~~s~~el~~~i~~~~G~~~~ 218 (309)
+++|+|++++.++.++...|++||+.+ ++.+|+.|+++.+++.+|.+..
T Consensus 191 ~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 240 (308)
T 1qyc_A 191 KEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 240 (308)
T ss_dssp CHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred cHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence 999999998888877666688888875 5789999999999999997654
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.53 E-value=8.7e-15 Score=133.94 Aligned_cols=162 Identities=9% Similarity=0.043 Sum_probs=113.0
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCC-CceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPN-LRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~-v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
++++|+|||+|+... +.+++|++++|++. + ++|||+ ++||.. .+|+.+..
T Consensus 75 ~~~~d~vi~~a~~~~----------~~~~~~l~~aa~~~--g~v~~~v~----S~~g~~-------------~~~~~~~~ 125 (321)
T 3c1o_A 75 LKQVDIVISALPFPM----------ISSQIHIINAIKAA--GNIKRFLP----SDFGCE-------------EDRIKPLP 125 (321)
T ss_dssp HTTCSEEEECCCGGG----------SGGGHHHHHHHHHH--CCCCEEEC----SCCSSC-------------GGGCCCCH
T ss_pred HcCCCEEEECCCccc----------hhhHHHHHHHHHHh--CCccEEec----cccccC-------------ccccccCC
Confidence 346899999998431 67889999999987 6 999983 357742 23433322
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHH--hHhCCceeecCCccccccce
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAIC--KHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~--~~~g~~~~~~G~~~~~~~~~ 166 (309)
|. .+.| ..|...|...+..+ ++|+++||+.++|+.. +. +.... ...+..+.++|++. ..+
T Consensus 126 p~-~~~y-~sK~~~e~~~~~~~---~~~~~lrp~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~---~~~ 187 (321)
T 3c1o_A 126 PF-ESVL-EKKRIIRRAIEAAA---LPYTYVSANCFGAYFV----NY------LLHPSPHPNRNDDIVIYGTGE---TKF 187 (321)
T ss_dssp HH-HHHH-HHHHHHHHHHHHHT---CCBEEEECCEEHHHHH----HH------HHCCCSSCCTTSCEEEETTSC---CEE
T ss_pred Cc-chHH-HHHHHHHHHHHHcC---CCeEEEEeceeccccc----cc------cccccccccccCceEEecCCC---cce
Confidence 21 3346 66655444432357 9999999999888531 10 00000 01233566677766 668
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecC-CCcccHHHHHHHHHHHhccccC
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSN-GDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~-g~~~s~~el~~~i~~~~G~~~~ 218 (309)
++++++|+|++++.++.++...|++|++.+ ++.+|+.|+++.+++.+|.+..
T Consensus 188 ~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 188 VLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp EEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred eEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence 999999999999998887766789888875 6889999999999999997654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=6e-15 Score=134.97 Aligned_cols=160 Identities=8% Similarity=0.006 Sum_probs=111.3
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCC-CceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPN-LRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~-v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
++++|+|||+|+.. ++.+++|++++|+++ + ++|||+ ++||.. .+|+.+..
T Consensus 77 ~~~~d~vi~~a~~~----------~~~~~~~l~~aa~~~--g~v~~~v~----S~~g~~-------------~~~~~~~~ 127 (318)
T 2r6j_A 77 MKKVDVVISALAFP----------QILDQFKILEAIKVA--GNIKRFLP----SDFGVE-------------EDRINALP 127 (318)
T ss_dssp HTTCSEEEECCCGG----------GSTTHHHHHHHHHHH--CCCCEEEC----SCCSSC-------------TTTCCCCH
T ss_pred HcCCCEEEECCchh----------hhHHHHHHHHHHHhc--CCCCEEEe----eccccC-------------cccccCCC
Confidence 34689999999843 266889999999987 5 999985 357732 23333322
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh-HhCCceeecCCcccccccee
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK-HEGVPLLFPGSKDCWEGYSV 167 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~-~~g~~~~~~G~~~~~~~~~~ 167 (309)
|. ...| ..|...|...+..+ ++|+++||+.++|.. .+. + +.. ..+.++.++|++. ..++
T Consensus 128 p~-~~~y-~sK~~~e~~~~~~~---~~~~~lr~~~~~~~~----~~~------~--~~~~~~~~~~~~~~~~~---~~~~ 187 (318)
T 2r6j_A 128 PF-EALI-ERKRMIRRAIEEAN---IPYTYVSANCFASYF----INY------L--LRPYDPKDEITVYGTGE---AKFA 187 (318)
T ss_dssp HH-HHHH-HHHHHHHHHHHHTT---CCBEEEECCEEHHHH----HHH------H--HCTTCCCSEEEEETTSC---CEEE
T ss_pred Cc-chhH-HHHHHHHHHHHhcC---CCeEEEEcceehhhh----hhh------h--ccccCCCCceEEecCCC---ceee
Confidence 21 2346 55554444333357 999999998877641 110 0 101 1234566777776 6789
Q ss_pred ccCHHHHHHHHHHHhcCCCCCCcceeec-CCCcccHHHHHHHHHHHhccccC
Q 045430 168 ASDADLIAEQHIWAAVDPYARNEAFNCS-NGDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 168 ~~~vd~la~a~i~aa~~~~a~g~~fNI~-~g~~~s~~el~~~i~~~~G~~~~ 218 (309)
+++++|++++++.++.++...|++|++. +++.+|+.|+++.+++.+|.+..
T Consensus 188 ~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 239 (318)
T 2r6j_A 188 MNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFK 239 (318)
T ss_dssp EECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred EeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCc
Confidence 9999999999998887765568888886 46889999999999999997654
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-13 Score=120.73 Aligned_cols=144 Identities=14% Similarity=0.064 Sum_probs=97.1
Q ss_pred CCCccEEEEeecccC--CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASR--PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
++++|+|||+|+... .++++++++|+.++.++++++++. +++|||++||..+|+.+
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~iv~~SS~~~~~~~-------------------- 139 (242)
T 2bka_A 82 FQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADKSS-------------------- 139 (242)
T ss_dssp GSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTTC--------------------
T ss_pred hcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC--CCCEEEEEccCcCCCCC--------------------
Confidence 457899999998532 245678999999999999999886 68999999999888621
Q ss_pred CCcccchHHHHHHHHHHHHhcCCCcce-eEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccce
Q 045430 88 LNVTNFYYTQEDILFEEVEKRKGPLSL-TWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYS 166 (309)
Q Consensus 88 ~p~p~~~y~~e~~~~~~~~~~~~~~~~-~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~ 166 (309)
.+.|...|...|...+..+ + .++++||+.||||....... . .+...+. ...|. ..+. .
T Consensus 140 ----~~~Y~~sK~~~e~~~~~~~---~~~~~~vrpg~v~~~~~~~~~~--~--~~~~~~~--~~~~~-~~~~-------~ 198 (242)
T 2bka_A 140 ----NFLYLQVKGEVEAKVEELK---FDRYSVFRPGVLLCDRQESRPG--E--WLVRKFF--GSLPD-SWAS-------G 198 (242)
T ss_dssp ----SSHHHHHHHHHHHHHHTTC---CSEEEEEECCEEECTTGGGSHH--H--HHHHHHH--CSCCT-TGGG-------G
T ss_pred ----cchHHHHHHHHHHHHHhcC---CCCeEEEcCceecCCCCCCcHH--H--HHHHHhh--cccCc-cccC-------C
Confidence 1237777766555543456 8 59999999999996532111 0 0111111 11221 1111 2
Q ss_pred eccCHHHHHHHHHHHhcCCCCCCcceeecCC
Q 045430 167 VASDADLIAEQHIWAAVDPYARNEAFNCSNG 197 (309)
Q Consensus 167 ~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g 197 (309)
.+++++|+|++++.++.++.. +..|++.++
T Consensus 199 ~~~~~~dva~~~~~~~~~~~~-~~~~~~~~~ 228 (242)
T 2bka_A 199 HSVPVVTVVRAMLNNVVRPRD-KQMELLENK 228 (242)
T ss_dssp TEEEHHHHHHHHHHHHTSCCC-SSEEEEEHH
T ss_pred cccCHHHHHHHHHHHHhCccc-cCeeEeeHH
Confidence 478999999999998876543 446666553
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.6e-15 Score=131.58 Aligned_cols=167 Identities=10% Similarity=0.021 Sum_probs=105.2
Q ss_pred CCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCCCCCC---
Q 045430 11 TDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE--- 83 (309)
Q Consensus 11 ~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E--- 83 (309)
.++|+|||+|+.. ..++++.+++|+.|+.++++++... ..+.+|||++||..+|+.. . ...|..|
T Consensus 61 ~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--~------~~~~~~~~~~ 132 (255)
T 2dkn_A 61 GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG--A------AELPMVEAML 132 (255)
T ss_dssp TCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTT--G------GGCHHHHHHH
T ss_pred CCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccc--c------cccchhhhhc
Confidence 4789999999954 3477889999999999999987653 1246899999999999743 0 0112211
Q ss_pred ----CCCCC-----CcccchHH-----HHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh
Q 045430 84 ----DLPRL-----NVTNFYYT-----QEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK 147 (309)
Q Consensus 84 ----~~p~~-----p~p~~~y~-----~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~ 147 (309)
+.+.. +.+.+.|+ .|.+++.++.+ ..+ ++++++||+.|+|+......... ......+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g---i~v~~v~pg~v~~~~~~~~~~~~----~~~~~~~ 205 (255)
T 2dkn_A 133 AGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRG---VRLNVVAPGAVETPLLQASKADP----RYGESTR 205 (255)
T ss_dssp HTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTT---CEEEEEEECCBCSHHHHHHHHCT----TTHHHHH
T ss_pred ccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcC---cEEEEEcCCcccchhhhhcccch----hhHHHHH
Confidence 11100 01222344 44444443321 147 99999999999998532110000 0000000
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHH
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKH 204 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~e 204 (309)
. +.| ..+++++++|+|+++++++..+ ...|+.|||++|..++..|
T Consensus 206 ----~--~~~------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 206 ----R--FVA------PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp ----S--CCC------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred ----H--HHH------HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 0 101 1247899999999999988764 3569999999998877544
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-11 Score=110.18 Aligned_cols=169 Identities=9% Similarity=-0.018 Sum_probs=109.8
Q ss_pred CCccEEEEeecccCC-----------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP-----------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++...- .+.+|||++||..+|+..
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 160 (278)
T 2bgk_A 91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG---------- 160 (278)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC----------
T ss_pred CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC----------
Confidence 368999999984311 234578999999999999876530 145799999999888631
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.. .... ..+|.+.|.+++.++.+ ..+ +.++++||+.|+|+.......... .....+.. ..+.
T Consensus 161 ~~-------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~--~~~~- 225 (278)
T 2bgk_A 161 EG-------VSHVYTATKHAVLGLTTSLCTELGEYG---IRVNCVSPYIVASPLLTDVFGVDS--SRVEELAH--QAAN- 225 (278)
T ss_dssp TT-------SCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESCCSCCCCTTSSSCCH--HHHHHHHH--HTCS-
T ss_pred CC-------CCcchHHHHHHHHHHHHHHHHHHhhcC---cEEEEEEeceecchhhhhhcccch--hHHHHhhh--cccc-
Confidence 10 0000 13345555555554432 247 999999999999986543221000 00111111 1111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHHHHHHHHHHh
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKHLWKVLAEQF 213 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~el~~~i~~~~ 213 (309)
....+++++|+|+++++++..+ ...|+.|+|.+|...++.|+.+.|++.+
T Consensus 226 ---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 226 ---------LKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp ---------SCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred ---------cccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 1235788999999999988643 3459999999999999999998876543
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.4e-11 Score=105.54 Aligned_cols=140 Identities=9% Similarity=0.049 Sum_probs=85.2
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
++++|+|||+|+... ...+++++++++++. +++|||++||..+|+.. . + ...+..|+.+..+
T Consensus 86 ~~~~D~vv~~a~~~~---------~~~~~~~~~~~~~~~--~~~~iV~iSS~~~~~~~--~-~----~~~~~~~~~~~~~ 147 (236)
T 3qvo_A 86 MQGQDIVYANLTGED---------LDIQANSVIAAMKAC--DVKRLIFVLSLGIYDEV--P-G----KFVEWNNAVIGEP 147 (236)
T ss_dssp HTTCSEEEEECCSTT---------HHHHHHHHHHHHHHT--TCCEEEEECCCCC-----------------------CGG
T ss_pred hcCCCEEEEcCCCCc---------hhHHHHHHHHHHHHc--CCCEEEEEecceecCCC--C-c----ccccchhhcccch
Confidence 346799999997421 114578999999887 68999999999999853 0 0 1223444443221
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
. ..|...|+++ . ..+ +++++|||+.|+++...... ....+. . ....++
T Consensus 148 ~-~~~~~~~~~l----~-~~g---i~~~~vrPg~i~~~~~~~~~-------------------~~~~~~-~---~~~~~i 195 (236)
T 3qvo_A 148 L-KPFRRAADAI----E-ASG---LEYTILRPAWLTDEDIIDYE-------------------LTSRNE-P---FKGTIV 195 (236)
T ss_dssp G-HHHHHHHHHH----H-TSC---SEEEEEEECEEECCSCCCCE-------------------EECTTS-C---CSCSEE
T ss_pred H-HHHHHHHHHH----H-HCC---CCEEEEeCCcccCCCCcceE-------------------EeccCC-C---CCCcEE
Confidence 1 2233344443 2 357 99999999999997543211 110011 0 112467
Q ss_pred CHHHHHHHHHHHhcCCC-CCCcceeecCCCc
Q 045430 170 DADLIAEQHIWAAVDPY-ARNEAFNCSNGDV 199 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~-a~g~~fNI~~g~~ 199 (309)
+++|+|++++.++..+. ..|++|+|+++..
T Consensus 196 ~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 196 SRKSVAALITDIIDKPEKHIGENIGINQPGT 226 (236)
T ss_dssp EHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred CHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence 89999999999998765 5799999998764
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.17 E-value=5.6e-11 Score=101.49 Aligned_cols=131 Identities=10% Similarity=-0.078 Sum_probs=89.0
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++++. +.+|||++||..+|... . +
T Consensus 65 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~sS~~~~~~~----------~-~- 130 (207)
T 2yut_A 65 GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ--KGARAVFFGAYPRYVQV----------P-G- 130 (207)
T ss_dssp CSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE--EEEEEEEECCCHHHHSS----------T-T-
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc--CCcEEEEEcChhhccCC----------C-C-
Confidence 378999999984321 34567899999999999999765 57899999999888531 0 0
Q ss_pred CCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 82 TEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 82 ~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
... ..+|.+.|.+++.++.+ ..+ ++++++||+.|+|+.. ...+.
T Consensus 131 ------~~~Y~~sK~a~~~~~~~~~~~~~~~g---i~v~~v~pg~v~t~~~-----------------~~~~~------- 177 (207)
T 2yut_A 131 ------FAAYAAAKGALEAYLEAARKELLREG---VHLVLVRLPAVATGLW-----------------APLGG------- 177 (207)
T ss_dssp ------BHHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEECCCCBCSGGG-----------------GGGTS-------
T ss_pred ------cchHHHHHHHHHHHHHHHHHHHhhhC---CEEEEEecCcccCCCc-----------------cccCC-------
Confidence 000 13345555555554432 247 9999999999998641 00111
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCCCCcceee
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNC 194 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI 194 (309)
..+++++++|+|++++.++.++ ..++++||
T Consensus 178 -----~~~~~~~~~dva~~~~~~~~~~-~~~~~~~i 207 (207)
T 2yut_A 178 -----PPKGALSPEEAARKVLEGLFRE-PVPALLEV 207 (207)
T ss_dssp -----CCTTCBCHHHHHHHHHHHHC---CCCSCCCC
T ss_pred -----CCCCCCCHHHHHHHHHHHHhCC-CCcccccC
Confidence 2257889999999999988765 34566664
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.7e-10 Score=101.03 Aligned_cols=160 Identities=8% Similarity=-0.058 Sum_probs=102.5
Q ss_pred HHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CC-CceEEEEeCCccccCCccc
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PN-LRHVCLQTGGKHYVGPFES 70 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~-v~r~v~~Ss~~vYG~~~~~ 70 (309)
+++.++....+|+|||+|+.... ++++.+++|+.|+.++++++.... .+ .+|||++||..+|+..
T Consensus 67 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--- 143 (244)
T 1cyd_A 67 TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF--- 143 (244)
T ss_dssp HHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---
T ss_pred HHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC---
Confidence 45556666679999999984321 334578999999999999876531 02 5799999999877531
Q ss_pred cCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh
Q 045430 71 FGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK 147 (309)
Q Consensus 71 ~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~ 147 (309)
. .... ..+|.+.|.+++.++.+ ..+ +.++++||+.|+|+.......... ....+.+
T Consensus 144 -------~--------~~~~Y~~sK~a~~~~~~~~a~~~~~~g---i~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~ 202 (244)
T 1cyd_A 144 -------P--------NLITYSSTKGAMTMLTKAMAMELGPHK---IRVNSVNPTVVLTDMGKKVSADPE---FARKLKE 202 (244)
T ss_dssp -------T--------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBTTHHHHHHTCCHH---HHHHHHH
T ss_pred -------C--------CcchhHHHHHHHHHHHHHHHHHhhhcC---eEEEEEecCcccCccccccccCHH---HHHHHHh
Confidence 0 0000 13455566666555442 247 999999999999985321100000 0011111
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
+. ..+++++++|+|+++++++..+ ...|+.+++.+|...
T Consensus 203 --~~------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 1cyd_A 203 --RH------------PLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYLA 243 (244)
T ss_dssp --HS------------TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred --cC------------CccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCccC
Confidence 11 2257889999999999988654 345899999988643
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.7e-10 Score=99.47 Aligned_cols=152 Identities=11% Similarity=0.047 Sum_probs=98.0
Q ss_pred CCccEEEEeecccCC--------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP--------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++... ..+.+|||++||..+|+.. . +
T Consensus 87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~-~ 155 (255)
T 1fmc_A 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------I-N 155 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------T-T
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC----------C-C
Confidence 368999999985321 23557899999999999988521 0146899999998777521 0 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc-chhHHHHHHHHHHHhHhCCceeec
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM-MNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
... ..+|.+.|.+++.++.+ ..+ +.++++||+.|+++..... .+. ....+. .+.|+
T Consensus 156 -------~~~Y~~sK~a~~~~~~~~~~~~~~~~---i~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~~--~~~~~--- 215 (255)
T 1fmc_A 156 -------MTSYASSKAAASHLVRNMAFDLGEKN---IRVNGIAPGAILTDALKSVITPE-----IEQKML--QHTPI--- 215 (255)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHTTT---EEEEEEEECSBCSHHHHTTCCHH-----HHHHHH--HTCSS---
T ss_pred -------CcccHHHHHHHHHHHHHHHHHhhhcC---cEEEEEecccCcchhhhhccChH-----HHHHHH--hcCCc---
Confidence 000 13345555555554432 247 9999999999999854221 111 011111 12222
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccH
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKW 202 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~ 202 (309)
..+.+++|+|+++++++..+ ...|++|||++|..+|+
T Consensus 216 ---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 216 ---------RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp ---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred ---------ccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 24568999999999888643 24589999999988774
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.07 E-value=4.3e-10 Score=100.93 Aligned_cols=166 Identities=8% Similarity=-0.104 Sum_probs=102.2
Q ss_pred CCccEEEEeeccc--C----C---ChHHHHHhHHHH----HHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWAS--R----P---TEAENCEVNGAM----LRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~--~----~---~~~~~~~vNv~g----t~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.. . . ++++.+++|+.| +++++..+++. +..|||++||...+...
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~~iv~~sS~~~~~~~---------- 145 (281)
T 3m1a_A 78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER--GSGSVVNISSFGGQLSF---------- 145 (281)
T ss_dssp SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTCCC----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEEcCccccCCC----------
Confidence 4689999999842 1 1 334578999999 66666666665 46899999998666421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCC--------cchhHHHHHHHHHHH
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYS--------MMNVVGTLCVYAAIC 146 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~--------~~~~~~~~~i~~~l~ 146 (309)
. .... ..+|.+.|.+.+.++.+ ..+ +.++++||+.|+++..+. ...+... ....
T Consensus 146 ~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~- 210 (281)
T 3m1a_A 146 A--------GFSAYSATKAALEQLSEGLADEVAPFG---IKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEK---VGPT- 210 (281)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCCTTTCCCCEEECCBCTTTHHH---HHHH-
T ss_pred C--------CchHHHHHHHHHHHHHHHHHHHhhccC---cEEEEEecCccccccccccccccCCcchhhHHH---hHHH-
Confidence 0 0000 13345555555554432 257 999999999998874321 1111110 0000
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhc
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFE 214 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G 214 (309)
.++...+ ....+.+++|+|+++++++.++. .++.||++++......+....+.+.++
T Consensus 211 ----~~~~~~~------~~~~~~~~~dva~a~~~~~~~~~-~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 211 ----RQLVQGS------DGSQPGDPAKAAAAIRLALDTEK-TPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp ----HHHHHC-----------CBCHHHHHHHHHHHHHSSS-CCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHhhc------cCCCCCCHHHHHHHHHHHHhCCC-CCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 0111111 22356779999999999998764 578999998877777777777766555
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-09 Score=94.26 Aligned_cols=138 Identities=10% Similarity=0.087 Sum_probs=89.0
Q ss_pred CCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCc
Q 045430 11 TDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNV 90 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~ 90 (309)
+++|+|||+|+.. |+. ++++++++++. +++|||++||..+|+.. +.+..+... +.
T Consensus 72 ~~~d~vv~~ag~~----------n~~-~~~~~~~~~~~--~~~~iv~iSs~~~~~~~----------~~~~~~~~~--~~ 126 (221)
T 3r6d_A 72 TNAEVVFVGAMES----------GSD-MASIVKALSRX--NIRRVIGVSMAGLSGEF----------PVALEKWTF--DN 126 (221)
T ss_dssp TTCSEEEESCCCC----------HHH-HHHHHHHHHHT--TCCEEEEEEETTTTSCS----------CHHHHHHHH--HT
T ss_pred cCCCEEEEcCCCC----------Chh-HHHHHHHHHhc--CCCeEEEEeeceecCCC----------Ccccccccc--cc
Confidence 4789999999843 666 99999999886 68999999999999742 111111100 00
Q ss_pred ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccC
Q 045430 91 TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASD 170 (309)
Q Consensus 91 p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~ 170 (309)
....|...|...+...+..+ ++|++|||+.|+++.....+. ....+. . ....+++
T Consensus 127 ~~~~y~~~K~~~e~~~~~~~---i~~~~vrpg~v~~~~~~~~~~------------------~~~~~~-~---~~~~~~~ 181 (221)
T 3r6d_A 127 LPISYVQGERQARNVLRESN---LNYTILRLTWLYNDPEXTDYE------------------LIPEGA-Q---FNDAQVS 181 (221)
T ss_dssp SCHHHHHHHHHHHHHHHHSC---SEEEEEEECEEECCTTCCCCE------------------EECTTS-C---CCCCEEE
T ss_pred cccHHHHHHHHHHHHHHhCC---CCEEEEechhhcCCCCCccee------------------eccCCc-c---CCCceee
Confidence 01136666655444433367 999999999999973221111 000000 0 1123677
Q ss_pred HHHHHHHHHHHh--cCCC-CCCcceeecCCC
Q 045430 171 ADLIAEQHIWAA--VDPY-ARNEAFNCSNGD 198 (309)
Q Consensus 171 vd~la~a~i~aa--~~~~-a~g~~fNI~~g~ 198 (309)
.+|+|++++.++ ..+. ..++.+.|+++.
T Consensus 182 ~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 182 REAVVKAIFDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp HHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred HHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence 899999999999 7654 468899998654
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.06 E-value=1e-10 Score=99.64 Aligned_cols=143 Identities=10% Similarity=-0.064 Sum_probs=91.9
Q ss_pred HHHhccCCCCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
+++.++.+.++|+|||+|+.... ++ .+.+++|+.++.++++++.+.-..-+|||++||...+...
T Consensus 49 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~------ 122 (202)
T 3d7l_A 49 IKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI------ 122 (202)
T ss_dssp HHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC------
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC------
Confidence 34445544568999999984321 22 3456899999999999997651112689999998655321
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh-cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK-RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~-~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
+.... ..+|...|.+++.++.+ ..+ ++++++||+.|+|+... . +
T Consensus 123 ------------~~~~~Y~~sK~~~~~~~~~~~~e~~~g---i~v~~v~pg~v~~~~~~--------------~----~- 168 (202)
T 3d7l_A 123 ------------VQGASAAMANGAVTAFAKSAAIEMPRG---IRINTVSPNVLEESWDK--------------L----E- 168 (202)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHTTSCSTT---CEEEEEEECCBGGGHHH--------------H----G-
T ss_pred ------------CccHHHHHHHHHHHHHHHHHHHHccCC---eEEEEEecCccCCchhh--------------h----h-
Confidence 00000 13345555555554432 136 99999999999997420 0 0
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeec
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCS 195 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~ 195 (309)
... ..+++++++|+|++++.++. ....|++|||.
T Consensus 169 ------~~~---~~~~~~~~~dva~~~~~~~~-~~~~G~~~~vd 202 (202)
T 3d7l_A 169 ------PFF---EGFLPVPAAKVARAFEKSVF-GAQTGESYQVY 202 (202)
T ss_dssp ------GGS---TTCCCBCHHHHHHHHHHHHH-SCCCSCEEEEC
T ss_pred ------hhc---cccCCCCHHHHHHHHHHhhh-ccccCceEecC
Confidence 001 23577899999999887774 34668999973
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.4e-10 Score=102.48 Aligned_cols=168 Identities=8% Similarity=-0.070 Sum_probs=104.5
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...+|+|||+|+.... ++++.+++|+.|+.++++++... ..+..|||++||...+...
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 171 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---------- 171 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC----------
Confidence 3468999999984211 33557899999999998887532 1135799999998666421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccC-CCcchhHHHHHHHHHHHhHhCCce
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSP-YSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~-~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
. .... ..+|.+.|.+++.++.+ ..+ +.++++||+.|++++. ......... ...+. .+.|+
T Consensus 172 ~--------~~~~Y~~sK~a~~~~~~~la~~~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~--~~~p~ 235 (302)
T 1w6u_A 172 G--------FVVPSASAKAGVEAMSKSLAAEWGKYG---MRFNVIQPGPIKTKGAFSRLDPTGTF---EKEMI--GRIPC 235 (302)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCC------CCTTSHH---HHHHH--TTCTT
T ss_pred C--------CcchhHHHHHHHHHHHHHHHHHhhhcC---cEEEEEeeccCCCcchhhhcccchhh---HHHHH--hcCCc
Confidence 0 0000 13455555555555432 257 9999999999999843 121111000 00111 11121
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCcccHHHHHHHHHHHhcc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDVFKWKHLWKVLAEQFEI 215 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~~s~~el~~~i~~~~G~ 215 (309)
..+.+++|+|+++++++..+. ..|+.|||.+|..+++.++...+.+..|.
T Consensus 236 ------------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 236 ------------GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp ------------SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred ------------CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence 245679999999998886432 36999999999988888887777655553
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.4e-09 Score=95.24 Aligned_cols=160 Identities=8% Similarity=-0.006 Sum_probs=100.4
Q ss_pred HHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CC-CceEEEEeCCccccCCccc
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PN-LRHVCLQTGGKHYVGPFES 70 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~-v~r~v~~Ss~~vYG~~~~~ 70 (309)
+++.++...++|+|||+|+.... ++++.+++|+.++.++++++...- .+ .+|||++||...|...
T Consensus 67 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--- 143 (244)
T 3d3w_A 67 TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV--- 143 (244)
T ss_dssp HHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---
T ss_pred HHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC---
Confidence 45556666679999999984321 235578999999999998876530 02 5799999998766421
Q ss_pred cCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh
Q 045430 71 FGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK 147 (309)
Q Consensus 71 ~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~ 147 (309)
. .... ..+|.+.|.+++.++.+ ..+ +.++++||+.|+++........-. ....+.
T Consensus 144 -------~--------~~~~Y~~sK~a~~~~~~~la~e~~~~~---i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~- 201 (244)
T 3d3w_A 144 -------T--------NHSVYCSTKGALDMLTKVMALELGPHK---IRVNAVNPTVVMTSMGQATWSDPH---KAKTML- 201 (244)
T ss_dssp -------T--------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBTTTTHHHHSCSTT---HHHHHH-
T ss_pred -------C--------CCchHHHHHHHHHHHHHHHHHHhcccC---eEEEEEEeccccccchhhhccChH---HHHHHH-
Confidence 0 0000 13455556665555432 246 999999999999974321100000 000111
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.+.| ...+.+++|+|+++++++..+ ...|+.|||.+|...
T Consensus 202 -~~~~------------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 202 -NRIP------------LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp -HTCT------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred -hhCC------------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence 1111 246778999999999988643 346999999988643
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.00 E-value=7.1e-10 Score=96.75 Aligned_cols=151 Identities=12% Similarity=0.010 Sum_probs=96.8
Q ss_pred CCccEEEEeecccCC-------------ChHHHHHhHHHHHHHHHHHhCcCCC--------CCceEEEEeCCccccCCcc
Q 045430 11 TDVTHIFYVTWASRP-------------TEAENCEVNGAMLRNVLRSVIPNAP--------NLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~--------~v~r~v~~Ss~~vYG~~~~ 69 (309)
.++|+|||+|+.... ++++.+++|+.++.++++++..... ...|||++||...|+..
T Consensus 65 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-- 142 (242)
T 1uay_A 65 APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ-- 142 (242)
T ss_dssp SCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC--
T ss_pred CCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--
Confidence 478999999984321 3456789999999999998864310 12399999999888631
Q ss_pred ccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHH
Q 045430 70 SFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAIC 146 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~ 146 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+|+......... ...+.
T Consensus 143 --------~--------~~~~Y~~sK~a~~~~~~~l~~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~ 198 (242)
T 1uay_A 143 --------I--------GQAAYAASKGGVVALTLPAARELAGWG---IRVVTVAPGLFDTPLLQGLPEKA-----KASLA 198 (242)
T ss_dssp --------T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSCSSHHHHTSCHHH-----HHHHH
T ss_pred --------C--------CCchhhHHHHHHHHHHHHHHHHHhhcC---cEEEEEEeccCcchhhhccchhH-----HHHHH
Confidence 0 0000 12344445554444332 247 99999999999998543222110 11111
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcc
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVF 200 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~ 200 (309)
.+.| ++ ..+.+++|+|+++++++..+...|+.|+|.+|..+
T Consensus 199 --~~~~--~~---------~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~ 239 (242)
T 1uay_A 199 --AQVP--FP---------PRLGRPEEYAALVLHILENPMLNGEVVRLDGALRM 239 (242)
T ss_dssp --TTCC--SS---------CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred --hhCC--Cc---------ccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeec
Confidence 1222 21 13567999999999988775567999999988754
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.8e-09 Score=96.23 Aligned_cols=146 Identities=9% Similarity=0.000 Sum_probs=96.6
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|++... ++++.+++|+.|+.++++++ ++. +..|||++||..+++..
T Consensus 94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~iv~isS~~~~~~~--------- 162 (260)
T 3un1_A 94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ--GSGHIVSITTSLVDQPM--------- 162 (260)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECCTTTTSCB---------
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEEechhhccCC---------
Confidence 3468999999985321 33456789999999999987 333 46899999998776521
Q ss_pred CCCCCCCCCCCCCc-c--cchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 77 HDTPFTEDLPRLNV-T--NFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
... +. + .+|.+.+.+.+.++.+ ..+ +.+++++|+.|++|....... ..+. ...
T Consensus 163 ~~~---------~~~~Y~~sKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~t~~~~~~~~--------~~~~--~~~ 220 (260)
T 3un1_A 163 VGM---------PSALASLTKGGLNAVTRSLAMEFSRSG---VRVNAVSPGVIKTPMHPAETH--------STLA--GLH 220 (260)
T ss_dssp TTC---------CCHHHHHHHHHHHHHHHHHHHHTTTTT---EEEEEEEECCBCCTTSCGGGH--------HHHH--TTS
T ss_pred CCC---------ccHHHHHHHHHHHHHHHHHHHHhCcCC---eEEEEEeecCCCCCCCCHHHH--------HHHh--ccC
Confidence 010 11 1 2355555555555543 136 999999999999985432110 0110 111
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVF 200 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~ 200 (309)
| ...+.+++|+|++++++.......||+|||.+|...
T Consensus 221 p------------~~r~~~~~dva~av~~L~~~~~itG~~i~vdGG~~~ 257 (260)
T 3un1_A 221 P------------VGRMGEIRDVVDAVLYLEHAGFITGEILHVDGGQNA 257 (260)
T ss_dssp T------------TSSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred C------------CCCCcCHHHHHHHHHHhcccCCCCCcEEEECCCeec
Confidence 2 234567999999999886555677999999988754
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.96 E-value=6e-10 Score=99.82 Aligned_cols=167 Identities=11% Similarity=0.044 Sum_probs=93.0
Q ss_pred CCccEEEEeecccC-----------C--ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCcc-ccCCccccCCC
Q 045430 11 TDVTHIFYVTWASR-----------P--TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKH-YVGPFESFGKI 74 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----------~--~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~v-YG~~~~~~~~~ 74 (309)
.++|+|||+|+... . ++++.+++|+.|+.++++++... ..+ .|||++||... +...
T Consensus 85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~------- 156 (278)
T 1spx_A 85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT------- 156 (278)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC-------
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC-------
Confidence 36899999998431 1 23446899999999999988653 013 79999999876 5321
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc-chhHHHHHH---HHHHHh
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM-MNVVGTLCV---YAAICK 147 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~~~~i---~~~l~~ 147 (309)
| ..+. ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|+++..... ......... +..+.+
T Consensus 157 -----~------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (278)
T 1spx_A 157 -----P------DFPYYSIAKAAIDQYTRNTAIDLIQHG---IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE 222 (278)
T ss_dssp -----T------TSHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBCCCC--------------HHHHHHHHH
T ss_pred -----C------CccHHHHHHHHHHHHHHHHHHHHHhcC---cEEEEEecCcccCccccccccCchhhhhhhHHHHHHHh
Confidence 0 0001 12344455555444432 257 9999999999999753221 000000000 111111
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCC---CCCcceeecCCCcccHHHHHHHHHHHh
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY---ARNEAFNCSNGDVFKWKHLWKVLAEQF 213 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~---a~g~~fNI~~g~~~s~~el~~~i~~~~ 213 (309)
..| ...+.+++|+|+++++++..+. ..|+.|+|.+|...++.++.+.+++.+
T Consensus 223 --~~p------------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 223 --CVP------------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp --HCT------------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred --cCC------------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 011 1246789999999998886432 469999999999999999999887654
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=9.8e-10 Score=97.04 Aligned_cols=176 Identities=9% Similarity=0.023 Sum_probs=97.2
Q ss_pred HHHhccCC-CCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 3 TQAKLSKL-TDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 3 ~~~~~~~~-~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
+++.++.+ .++|+|||+|+.. ..++++.+++|+.|+.++++++... ..+..|||++||..+|..+... . ..
T Consensus 52 v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~---~~ 127 (257)
T 1fjh_A 52 IADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDK-N---PL 127 (257)
T ss_dssp HHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGG-C---TT
T ss_pred HHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhcccccc-c---hh
Confidence 45566666 6899999999954 3467889999999999999988531 1146899999999888432000 0 00
Q ss_pred CCCCCCCCC---------CCCc-ccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHH
Q 045430 78 DTPFTEDLP---------RLNV-TNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLC 140 (309)
Q Consensus 78 ~~p~~E~~p---------~~p~-p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~ 140 (309)
..+..+++. ..+. +...|..+| +++..+.+ ..+ +.+++|||+.|.++.........
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~---- 200 (257)
T 1fjh_A 128 ALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG---VRLNTIAPGATETPLLQAGLQDP---- 200 (257)
T ss_dssp HHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT---CEEEEEEECC-----------------
T ss_pred hhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcC---eEEEEEeeCCCCCccchhhccch----
Confidence 000000000 0111 222355444 43333321 257 99999999999887533211100
Q ss_pred HHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 141 VYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 141 i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
....+.+ .+.. ....+.+++|+|+++++++..+ ...|+.|++.+|...+
T Consensus 201 ~~~~~~~----~~~~--------~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~ 251 (257)
T 1fjh_A 201 RYGESIA----KFVP--------PMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251 (257)
T ss_dssp ------------CCC--------STTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred hHHHHHH----hccc--------ccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence 0000000 0000 1123578999999999988654 3569999999886543
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.94 E-value=8.9e-10 Score=99.09 Aligned_cols=170 Identities=9% Similarity=0.055 Sum_probs=108.9
Q ss_pred CCccEEEEeecc-cC--C-------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWA-SR--P-------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~-~~--~-------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|+. .. + ++++.+++|+.|+.++++++...- .+-.|||++||...|... ..
T Consensus 90 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~ 160 (281)
T 3svt_A 90 GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH---------RW 160 (281)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC---------TT
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC---------CC
Confidence 468999999985 21 1 234578999999999999876531 022489999998777421 00
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
... ..+|.+.+.+.+.++.+ ..+ +.+..++|+.|+++.......... ....+. ...|+
T Consensus 161 ---------~~~Y~asK~a~~~l~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~--~~~p~-- 221 (281)
T 3svt_A 161 ---------FGAYGVTKSAVDHLMQLAADELGASW---VRVNSIRPGLIRTDLVAAITESAE---LSSDYA--MCTPL-- 221 (281)
T ss_dssp ---------CTHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSGGGHHHHTCHH---HHHHHH--HHCSS--
T ss_pred ---------ChhHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEEeCcCcCcchhhcccCHH---HHHHHH--hcCCC--
Confidence 001 13345555555544432 256 999999999999875321100000 001111 11222
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc-HHHHHHHHHHHhccccC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK-WKHLWKVLAEQFEIENY 218 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s-~~el~~~i~~~~G~~~~ 218 (309)
..+.+++|+|+++++++..+ ...||+|+|.+|...+ ..++...+.+.+|.+..
T Consensus 222 ----------~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~ 277 (281)
T 3svt_A 222 ----------PRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDAL 277 (281)
T ss_dssp ----------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTGG
T ss_pred ----------CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCccc
Confidence 24457899999999888643 3469999999998876 77889999999986643
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.94 E-value=5.5e-10 Score=99.26 Aligned_cols=163 Identities=9% Similarity=0.028 Sum_probs=98.5
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC---CCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA---PNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~---~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...++|+|||+|+.... ++++.+++|+.|+.++++++...- ..-.|||++||...+...
T Consensus 79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 149 (259)
T 4e6p_A 79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE--------- 149 (259)
T ss_dssp HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC---------
Confidence 34478999999985321 334567899999999999886431 012589999998766421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhH-hCCc
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH-EGVP 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~-~g~~ 152 (309)
. .... ..+|.+.+.+.+.++.+ ..+ +.++.++|+.|++|...... .++...... .+..
T Consensus 150 -~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~ 211 (259)
T 4e6p_A 150 -A--------LVAIYCATKAAVISLTQSAGLDLIKHR---INVNAIAPGVVDGEHWDGVD------ALFARYENRPRGEK 211 (259)
T ss_dssp -T--------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCSTTHHHHH------HHHHHHHTCCTTHH
T ss_pred -C--------CChHHHHHHHHHHHHHHHHHHHhhhcC---CEEEEEEECCCccchhhhhh------hhhhhhccCChHHH
Confidence 0 0000 13344455555554432 247 99999999999997532110 111111100 0001
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
....+++. ....+.+++|+|+++++++..+ ...||+|||.+|..+|
T Consensus 212 ~~~~~~~~---p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 212 KRLVGEAV---PFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp HHHHHHHS---TTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred HHHHhccC---CCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 11111221 4467889999999988877533 3459999999987654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.6e-08 Score=91.23 Aligned_cols=162 Identities=13% Similarity=0.011 Sum_probs=97.7
Q ss_pred HHHhccCCCCccEEEEeecccC-------CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASR-------PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~-------~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
+++.++.+.++|+|||+|++.. .++++.+++|+.|+.++++++... ..+|||++||...|... .
T Consensus 77 v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~--~~~riv~isS~~~~~~~---~---- 147 (291)
T 3rd5_A 77 VRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR--LTDRVVTVSSMAHWPGR---I---- 147 (291)
T ss_dssp HHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG--EEEEEEEECCGGGTTCC---C----
T ss_pred HHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHhheeEeechhhccCC---C----
Confidence 4556666678999999998532 255668999999999999999876 46799999999888542 0
Q ss_pred CCCCCCCCC-CCCCCcccchHHHHH-----HHHHHHHh----cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHH
Q 045430 76 PHDTPFTED-LPRLNVTNFYYTQED-----ILFEEVEK----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAI 145 (309)
Q Consensus 76 ~~~~p~~E~-~p~~p~p~~~y~~e~-----~~~~~~~~----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l 145 (309)
...+..++ .+.. +..-|+.+| +.+.++.+ ..+ +.++.++|+.|..+-........ ...+
T Consensus 148 -~~~~~~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~g~~---i~v~~v~PG~v~T~~~~~~~~~~-----~~~~ 216 (291)
T 3rd5_A 148 -NLEDLNWRSRRYS--PWLAYSQSKLANLLFTSELQRRLTAAGSP---LRALAAHPGYSHTNLQGASGRKL-----GDAL 216 (291)
T ss_dssp -CSSCTTCSSSCCC--HHHHHHHHHHHHHHHHHHHHHHHHHTTCC---CEEEEECCSGGGSCC-----------------
T ss_pred -CcccccccccCCC--CcchHHHHHHHHHHHHHHHHHHHhhCCCC---EEEEEeeCCCCccccccccchHH-----HHHH
Confidence 01112222 2221 223355544 33333322 134 88999999999775432211100 0000
Q ss_pred HhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCC
Q 045430 146 CKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGD 198 (309)
Q Consensus 146 ~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~ 198 (309)
...++ .+-...++++|+++++++..+...|+.|++.+|.
T Consensus 217 ---~~~~~-----------~~~~~~~~~~A~~~~~l~~~~~~~G~~~~vdgG~ 255 (291)
T 3rd5_A 217 ---MSAAT-----------RVVATDADFGARQTLYAASQDLPGDSFVGPRFGY 255 (291)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHSCCCTTCEEEETTSS
T ss_pred ---HHHHH-----------HHHhCCHHHHHHHHHHHHcCCCCCCceeCCcccc
Confidence 00011 1223358899999999998776779999987653
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.92 E-value=1.6e-09 Score=96.23 Aligned_cols=149 Identities=7% Similarity=0.007 Sum_probs=81.9
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++. +. +.+|||++||..+|...
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~iv~isS~~~~~~~---------- 158 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS--GCGNIIFMSSIAGVVSA---------- 158 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SSCEEEEEC------------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEccchhccCC----------
Confidence 468999999984211 334468999999999999983 33 46899999998776421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+++.++.+ ..+ +.++++||+.|+|+......... ....+. ...|
T Consensus 159 ~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~--~~~~-- 219 (266)
T 1xq1_A 159 S--------VGSIYSATKGALNQLARNLACEWASDG---IRANAVAPAVIATPLAEAVYDDE----FKKVVI--SRKP-- 219 (266)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEECCSCC-----------------------------
T ss_pred C--------CCchHHHHHHHHHHHHHHHHHHHhHhC---cEEEEEeeCCCccchhhhhcCHH----HHHHHH--hcCC--
Confidence 0 0001 13344555555544432 247 99999999999998643221000 000000 0111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
...+.+++|+|+++++++..+ ...|+.|+|.+|...
T Consensus 220 ----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 257 (266)
T 1xq1_A 220 ----------LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV 257 (266)
T ss_dssp --------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred ----------CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCccc
Confidence 124567889999998887643 345999999998653
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=6.5e-10 Score=102.55 Aligned_cols=106 Identities=13% Similarity=0.079 Sum_probs=75.3
Q ss_pred CCCccEEEEeeccc---CCChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCcc-ccCCccccCCCCCCCCCCC-C
Q 045430 10 LTDVTHIFYVTWAS---RPTEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKH-YVGPFESFGKIRPHDTPFT-E 83 (309)
Q Consensus 10 ~~~vd~V~H~A~~~---~~~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~v-YG~~~~~~~~~~~~~~p~~-E 83 (309)
++++|+|||+|+.. ..++.++.++|+.+|+|+++++++++ |+. +|+++|+..- .. |+. |
T Consensus 78 ~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~-~vvv~snp~~~~~--------------~~~~~ 142 (327)
T 1y7t_A 78 FKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDV-KVLVVGNPANTNA--------------LIAYK 142 (327)
T ss_dssp TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTC-EEEECSSSHHHHH--------------HHHHH
T ss_pred hCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEeCCchhhhH--------------HHHHH
Confidence 56789999999953 23678899999999999999999874 432 6777776531 11 111 2
Q ss_pred CC-CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcch
Q 045430 84 DL-PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMN 134 (309)
Q Consensus 84 ~~-p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~ 134 (309)
.. ...|. + .+++..|.++..++.. .+ ++.+++||++||||.....++
T Consensus 143 ~~~~~~p~~~yg~tkl~~er~~~~~a~~-~g---~~~~~vr~~~V~G~h~~~~~~ 193 (327)
T 1y7t_A 143 NAPGLNPRNFTAMTRLDHNRAKAQLAKK-TG---TGVDRIRRMTVWGNHSSTMFP 193 (327)
T ss_dssp TCTTSCGGGEEECCHHHHHHHHHHHHHH-HT---CCGGGEECCEEEBCSSTTCEE
T ss_pred HcCCCChhheeccchHHHHHHHHHHHHH-hC---cChhheeeeEEEcCCCCeEEE
Confidence 22 12222 2 5688889988887764 68 999999999999997654443
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=4.5e-09 Score=93.38 Aligned_cols=157 Identities=6% Similarity=-0.077 Sum_probs=96.1
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++... ..+.+|||++||...|... .
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 152 (263)
T 3ai3_A 84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL----------W- 152 (263)
T ss_dssp SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC----------C-
Confidence 468999999984321 33457899999999998887431 0146899999999877531 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH------HHHHHHHHHhHhC
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG------TLCVYAAICKHEG 150 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~------~~~i~~~l~~~~g 150 (309)
.... ..+|.+.+.+.+.++.+ ..+ +.++++||+.|++|.......... .-.....+.+. +
T Consensus 153 -------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 221 (263)
T 3ai3_A 153 -------YEPIYNVTKAALMMFSKTLATEVIKDN---IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE-H 221 (263)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH-H
T ss_pred -------CcchHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc-C
Confidence 0001 13344555555444432 257 999999999999985321100000 00000111000 0
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCccc
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDVFK 201 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~~s 201 (309)
. ....+.+++|+|+++++++..+. ..|+.|+|.+|...|
T Consensus 222 ~------------p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 222 A------------PIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp C------------TTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred C------------CCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 1 12357889999999998886542 459999999987665
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.9e-09 Score=89.97 Aligned_cols=163 Identities=9% Similarity=-0.012 Sum_probs=102.9
Q ss_pred HHHhccCCCCccEEEEeeccc-CC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccC
Q 045430 3 TQAKLSKLTDVTHIFYVTWAS-RP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
+++.++.+.++|+++|+|+.. .. ++++.+++|+.|+.++++++...-..-.|||++||...+...
T Consensus 50 v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----- 124 (223)
T 3uce_A 50 VYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV----- 124 (223)
T ss_dssp HHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC-----
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC-----
Confidence 444555556799999999843 11 234468999999999999987641112489999998766421
Q ss_pred CCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 73 KIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
. .... ..+|.+.+.+.+..+.+... +.+..++|+.|.++.......... -..+..+.+ +.
T Consensus 125 -----~--------~~~~Y~asK~a~~~~~~~la~e~~~---i~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~--~~ 185 (223)
T 3uce_A 125 -----A--------NTYVKAAINAAIEATTKVLAKELAP---IRVNAISPGLTKTEAYKGMNADDR-DAMYQRTQS--HL 185 (223)
T ss_dssp -----T--------TCHHHHHHHHHHHHHHHHHHHHHTT---SEEEEEEECSBCSGGGTTSCHHHH-HHHHHHHHH--HS
T ss_pred -----C--------CchHHHHHHHHHHHHHHHHHHhhcC---cEEEEEEeCCCcchhhhhcchhhH-HHHHHHHhh--cC
Confidence 0 0000 13345555566666654334 899999999999875433322111 011111111 11
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCccc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFK 201 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s 201 (309)
| ...+.+++|+|+++++++..+...|++++|.+|..++
T Consensus 186 ~------------~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~~~s 223 (223)
T 3uce_A 186 P------------VGKVGEASDIAMAYLFAIQNSYMTGTVIDVDGGALLG 223 (223)
T ss_dssp T------------TCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGGC
T ss_pred C------------CCCccCHHHHHHHHHHHccCCCCCCcEEEecCCeecC
Confidence 2 1345679999999999887666779999999987653
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.86 E-value=1e-08 Score=90.46 Aligned_cols=149 Identities=12% Similarity=0.019 Sum_probs=93.4
Q ss_pred CCccEEEEeecccC---C----C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASR---P----T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~----~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|+... + + +++.+++|+.|+.++++++... ..+..+||++||...+...
T Consensus 89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 157 (260)
T 3awd_A 89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN----------- 157 (260)
T ss_dssp SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC-----------
Confidence 36899999998532 1 2 2457899999999999987642 0136799999997655321
Q ss_pred CCCCCCCCCCCc-c--cchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHhCCc
Q 045430 79 TPFTEDLPRLNV-T--NFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 79 ~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
| ..|. + .+|.+.|.+++.++.+ ..+ ++++++||+.|+|+... .... - ..+..+. .+.|
T Consensus 158 -~------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g---i~v~~v~pg~v~t~~~~~~~~~-~---~~~~~~~--~~~~ 221 (260)
T 3awd_A 158 -R------PQQQAAYNASKAGVHQYIRSLAAEWAPHG---IRANAVAPTYIETTLTRFGMEK-P---ELYDAWI--AGTP 221 (260)
T ss_dssp -S------SSCCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCCTTTHHHHTC-H---HHHHHHH--HTCT
T ss_pred -C------CCCccccHHHHHHHHHHHHHHHHHhhhcC---eEEEEEEeeeeccchhhcccCC-h---HHHHHHH--hcCC
Confidence 0 0111 1 2344455555554432 247 99999999999998643 1110 0 0111111 1222
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+ ..+.+++|+|+++++++..+ ...|+.|||.+|.
T Consensus 222 ~------------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 222 M------------GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp T------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred c------------CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 1 24678999999999888643 3469999999875
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=5.1e-09 Score=91.73 Aligned_cols=149 Identities=9% Similarity=0.025 Sum_probs=92.4
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|+.... ++++.+++|+.|+.++++++... ..+.+|||++||...+... ..
T Consensus 83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~ 153 (248)
T 2pnf_A 83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN---------VG 153 (248)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC---------TT
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC---------CC
Confidence 3478999999984321 33557899999998877776532 0146899999997654321 00
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
... ..+|.+.+.+.+.++.+ ..+ +.++++||+.|+++........ ....+. ...|
T Consensus 154 ---------~~~Y~~sK~a~~~~~~~la~e~~~~~---i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~--- 211 (248)
T 2pnf_A 154 ---------QVNYSTTKAGLIGFTKSLAKELAPRN---VLVNAVAPGFIETDMTAVLSEE-----IKQKYK--EQIP--- 211 (248)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCGGGGGSCHH-----HHHHHH--HTCT---
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHhcccC---eEEEEEEeceecCchhhhccHH-----HHHHHH--hcCC---
Confidence 001 13345555555444432 246 9999999999999864322111 001111 1111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+.+++|+|+++++++..+ ...|++|+|.+|.
T Consensus 212 ---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 212 ---------LGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM 247 (248)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ---------CCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence 124678999999999888643 3459999999874
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.85 E-value=3.1e-09 Score=92.93 Aligned_cols=146 Identities=12% Similarity=0.073 Sum_probs=89.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHH----HHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAML----RNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt----~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... ++++.+++|+.|+ +++++++++. +.+|||++||...+... .
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~iv~~sS~~~~~~~---------~ 147 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA--RFGRIVNITSVVGILGN---------P 147 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCTHHHHCC---------S
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc--CCCEEEEEeChhhccCC---------C
Confidence 468999999985321 3345789999994 4455555544 57899999998655321 0
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. ... ..+|.+.+.+.+.++.+ ..+ +.++++||+.|+++......... ...+. .+.|
T Consensus 148 ~---------~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~--~~~~-- 206 (245)
T 2ph3_A 148 G---------QANYVASKAGLIGFTRAVAKEYAQRG---ITVNAVAPGFIETEMTERLPQEV-----KEAYL--KQIP-- 206 (245)
T ss_dssp S---------BHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHTSCHHH-----HHHHH--HTCT--
T ss_pred C---------CcchHHHHHHHHHHHHHHHHHHHHcC---eEEEEEEEEeecCcchhhcCHHH-----HHHHH--hcCC--
Confidence 0 000 12344444444444432 247 99999999999997542221111 01111 1111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+.+++|+|+++++++..+ ...|+.|+|.+|.
T Consensus 207 ----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 207 ----------AGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp ----------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred ----------CCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 134678999999999888653 2459999998874
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.84 E-value=7.4e-09 Score=90.54 Aligned_cols=149 Identities=10% Similarity=-0.003 Sum_probs=92.4
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|+.... ++++.+++|+.|+.++++++...- .+..|||++||...+... .
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~ 146 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN----------I 146 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC----------C
Confidence 3468999999985321 334578999999999999886530 146899999998665321 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+.+.++.+ ..+ +.++++||+.|+++........ ....+ .. ..+
T Consensus 147 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~---~~-~~~- 205 (244)
T 1edo_A 147 --------GQANYAAAKAGVIGFSKTAAREGASRN---INVNVVCPGFIASDMTAKLGED-----MEKKI---LG-TIP- 205 (244)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHHTTT---EEEEEEEECSBCSHHHHTTCHH-----HHHHH---HT-SCT-
T ss_pred --------CCccchhhHHHHHHHHHHHHHHhhhcC---CEEEEEeeCccccchhhhcChH-----HHHHH---hh-cCC-
Confidence 0000 12344444444443332 247 9999999999998743221111 00111 11 111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCC---CCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPY---ARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~---a~g~~fNI~~g~ 198 (309)
...+.+++|+|+++++++..+. ..|+.|+|.+|.
T Consensus 206 ---------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 206 ---------LGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp ---------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred ---------CCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 1246789999999998884442 359999999874
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.3e-08 Score=89.46 Aligned_cols=157 Identities=10% Similarity=0.012 Sum_probs=93.9
Q ss_pred HHHhccCCCCccEEEEeecccC---------CChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCcccc
Q 045430 3 TQAKLSKLTDVTHIFYVTWASR---------PTEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~---------~~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
+++.++.+.++|+|||+|+... .++++.+++|+.|+.++++++... ..+..|||++||...|...
T Consensus 75 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 150 (249)
T 3f9i_A 75 CSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN---- 150 (249)
T ss_dssp HHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC----
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC----
Confidence 4556666678999999998422 155678999999999998887432 0134699999998776421
Q ss_pred CCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhH
Q 045430 72 GKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH 148 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~ 148 (309)
. .... ..+|.+.+.+++.++.+ ..+ +.+++++|+.|.++.......... ..+..
T Consensus 151 ------~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~-----~~~~~- 207 (249)
T 3f9i_A 151 ------P--------GQANYCASKAGLIGMTKSLSYEVATRG---ITVNAVAPGFIKSDMTDKLNEKQR-----EAIVQ- 207 (249)
T ss_dssp ------S--------CSHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBC------CCHHHH-----HHHHH-
T ss_pred ------C--------CCchhHHHHHHHHHHHHHHHHHHHHcC---cEEEEEecCccccCcccccCHHHH-----HHHHh-
Confidence 0 0000 12344444444444332 257 999999999999875433322110 01100
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+. ....+.+++|+|+++++++..+ ...||.|||.+|..
T Consensus 208 -~~------------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 208 -KI------------PLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGML 247 (249)
T ss_dssp -HC------------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred -cC------------CCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence 11 2245678999999999888653 34599999998864
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=9.4e-09 Score=90.53 Aligned_cols=146 Identities=12% Similarity=0.081 Sum_probs=93.7
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++ ++. +..|||++||...+...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~---------- 148 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ--RSGAIINLSSVVGAVGN---------- 148 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCHHHHHCC----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEEcchhhcCCC----------
Confidence 468999999985321 33457899999999999998 433 45799999998766421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|+++.......... ..+ ..+.|+
T Consensus 149 ~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~~~-----~~~--~~~~p~- 209 (246)
T 3osu_A 149 P--------GQANYVATKAGVIGLTKSAARELASRG---ITVNAVAPGFIVSDMTDALSDELK-----EQM--LTQIPL- 209 (246)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBGGGCCSCSCHHHH-----HHH--HTTCTT-
T ss_pred C--------CChHHHHHHHHHHHHHHHHHHHhcccC---eEEEEEEECCCcCCcccccCHHHH-----HHH--HhcCCC-
Confidence 0 0000 12344444454444432 257 999999999999986543322110 111 112222
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..+...+|+|+++++++..+ ...|++|||.+|.
T Consensus 210 -----------~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 210 -----------ARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp -----------CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred -----------CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 24556889999999888643 2459999999875
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.83 E-value=2e-08 Score=88.05 Aligned_cols=150 Identities=10% Similarity=-0.017 Sum_probs=92.0
Q ss_pred CCccEEEEeecccCC------------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASRP------------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++... ..+.+|||++||...|...
T Consensus 79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------- 149 (250)
T 2cfc_A 79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF--------- 149 (250)
T ss_dssp SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC---------
Confidence 368999999984321 23456799999998776665431 0146899999998776421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
. .... ..+|.+.+.+++.++.+ ..+ ++++++||+.|+|+......... .....+. .+.|
T Consensus 150 -~--------~~~~Y~~sK~a~~~~~~~l~~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~--~~~~- 211 (250)
T 2cfc_A 150 -P--------GRSAYTTSKGAVLQLTKSVAVDYAGSG---IRCNAVCPGMIETPMTQWRLDQP---ELRDQVL--ARIP- 211 (250)
T ss_dssp -T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSTTTHHHHTSH---HHHHHHH--TTCT-
T ss_pred -C--------CchhHHHHHHHHHHHHHHHHHHhcccC---eEEEEEEeCcCccCccccccCCH---HHHHHHH--hcCC-
Confidence 0 0000 13345555555554432 247 99999999999998642211100 0001111 1112
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~ 198 (309)
...+.+.+|+|+++++++..+. ..|+.++|.+|.
T Consensus 212 -----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 212 -----------QKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp -----------TCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred -----------CCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence 1245689999999999887543 459999998875
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=4.8e-09 Score=92.83 Aligned_cols=153 Identities=12% Similarity=0.012 Sum_probs=90.3
Q ss_pred Cc-cEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CC-CceEEEEeCCccccCCccccCCCCCCC
Q 045430 12 DV-THIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PN-LRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 12 ~v-d~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~-v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.+ |+|||+|+.... ++++.+++|+.|+.++++++.... .+ ..|||++||...+... .
T Consensus 91 ~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 160 (264)
T 2pd6_A 91 RPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN----------V 160 (264)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC----------T
T ss_pred CCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC----------C
Confidence 46 999999985321 335578999999999999986531 02 4689999998655321 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+++..+.+ ..+ ++++++||+.|+|+........ ....+. .+.|
T Consensus 161 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~--- 219 (264)
T 2pd6_A 161 --------GQTNYAASKAGVIGLTQTAARELGRHG---IRCNSVLPGFIATPMTQKVPQK-----VVDKIT--EMIP--- 219 (264)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSCC---------------CTG--GGCT---
T ss_pred --------CChhhHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeecccccchhhcCHH-----HHHHHH--HhCC---
Confidence 0000 12344444455444432 257 9999999999999864321110 000000 0111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHHH
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWKH 204 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~e 204 (309)
...+.+++|+|+++++++..+ ...|+.+++.+|...++..
T Consensus 220 ---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~ 261 (264)
T 2pd6_A 220 ---------MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL 261 (264)
T ss_dssp ---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred ---------CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence 124568999999999888643 3569999999998766543
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.81 E-value=2e-08 Score=88.13 Aligned_cols=148 Identities=11% Similarity=-0.024 Sum_probs=90.8
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHH----hCcCCCCC-ceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRS----VIPNAPNL-RHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a----~~~~~~~v-~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..+|+|||+|+.... ++++.+++|+.|+.++.++ +++. +. +|||++||...|...
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~~~~~--------- 149 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK--GLGASIINMSSIEGFVGD--------- 149 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS--SSCEEEEEECCGGGTSCC---------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc--CCCCEEEEeCCchhccCC---------
Confidence 358999999984321 2345789999977665554 5554 45 799999998777521
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh----cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
. .... ..+|.+.|.+++.++.+ ..+ +.++++||+.|+++......... .......
T Consensus 150 -~--------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~---i~v~~v~Pg~v~t~~~~~~~~~~--------~~~~~~~ 209 (251)
T 1zk4_A 150 -P--------SLGAYNASKGAVRIMSKSAALDCALKDYD---VRVNTVHPGYIKTPLVDDLPGAE--------EAMSQRT 209 (251)
T ss_dssp -T--------TCHHHHHHHHHHHHHHHHHHHHHHHTTCS---EEEEEEEECCBCCHHHHTSTTHH--------HHHTSTT
T ss_pred -C--------CCccchHHHHHHHHHHHHHHHHhcccCCC---eEEEEEeeCcCcchhhhhcCchh--------hhHHHhh
Confidence 0 0000 12344455554443321 247 99999999999998542211100 0010111
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.. ....+.+++|+|+++++++..+ ...|+.|+|.+|..
T Consensus 210 ~~----------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 210 KT----------PMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp TC----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cC----------CCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence 11 1234778999999999988653 24599999998864
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=6.2e-09 Score=91.79 Aligned_cols=148 Identities=11% Similarity=0.039 Sum_probs=73.8
Q ss_pred CCccEEEEeecccC---------C---ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCC
Q 045430 11 TDVTHIFYVTWASR---------P---TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---------~---~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
.++|+|||+|++.. . ++++.+++|+.|+.++++++ ++. +-.|||++||...|...
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~------- 155 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR--GGGAIVNQSSTAAWLYS------- 155 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCEEEEEECC--------------
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCCEEEEECCccccCCC-------
Confidence 36899999998521 1 23457899999966665554 443 35789999999777421
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. ++ ..+|.+.+.+++.++.+ ..+ +.++.++|+.|+++......... ....+. .+.|
T Consensus 156 ---~-------~Y---~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~----~~~~~~--~~~~ 213 (253)
T 3qiv_A 156 ---N-------YY---GLAKVGINGLTQQLSRELGGRN---IRINAIAPGPIDTEANRTTTPKE----MVDDIV--KGLP 213 (253)
T ss_dssp -----------------CCHHHHHHHHHHHHHHTTTTT---EEEEEEEC-------------------------------
T ss_pred ---c-------hh---HHHHHHHHHHHHHHHHHHhhcC---eEEEEEEecCCcccchhhcCcHH----HHHHHh--ccCC
Confidence 0 01 24678888777766654 246 99999999999998543221100 000010 1111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
...+..++|+|+++++++..+ ...|++|||.+|..++
T Consensus 214 ------------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 214 ------------LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp ------------------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred ------------CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence 123445788999999888643 3469999999987654
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.2e-08 Score=90.07 Aligned_cols=156 Identities=10% Similarity=0.033 Sum_probs=94.7
Q ss_pred cHHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHH----HHhCcCCCCCceEEEEeCCccccCCc
Q 045430 2 DTQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVL----RSVIPNAPNLRHVCLQTGGKHYVGPF 68 (309)
Q Consensus 2 ~~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll----~a~~~~~~~v~r~v~~Ss~~vYG~~~ 68 (309)
++++.++.+.++|+|||+|+.... ++++.+++|+.|+.++. ..+++. +.+|||++||..+|...
T Consensus 71 ~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~- 147 (249)
T 1o5i_A 71 DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK--GWGRIVAITSFSVISPI- 147 (249)
T ss_dssp CHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEEcchHhcCCC-
Confidence 344555555689999999984321 23456799999976654 445444 46899999999877521
Q ss_pred cccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHH-H
Q 045430 69 ESFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYA-A 144 (309)
Q Consensus 69 ~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~-~ 144 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+++........ ... .
T Consensus 148 ---------~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~ 202 (249)
T 1o5i_A 148 ---------E--------NLYTSNSARMALTGFLKTLSFEVAPYG---ITVNCVAPGWTETERVKELLSE-----EKKKQ 202 (249)
T ss_dssp ---------T--------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCTTHHHHSCH-----HHHHH
T ss_pred ---------C--------CCchHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCCCccCcccccchh-----hHHHH
Confidence 0 0000 12344444444443332 257 9999999999998742111110 000 1
Q ss_pred HHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 145 ICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 145 l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+. ...| ...+.+++|+|+++++++..+ ...|+.|+|.+|..
T Consensus 203 ~~--~~~p------------~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 203 VE--SQIP------------MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 245 (249)
T ss_dssp HH--TTST------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HH--hcCC------------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 10 1111 124678999999998888643 34599999998853
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.80 E-value=3e-09 Score=94.62 Aligned_cols=153 Identities=7% Similarity=-0.125 Sum_probs=93.6
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccc-cCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHY-VGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vY-G~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++.... .+ +|||++||..+| +.. .
T Consensus 98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~----------~- 165 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI----------P- 165 (274)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC----------C-
T ss_pred CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC----------C-
Confidence 378999999985321 235578999999999988876531 12 699999999887 321 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh-------HHHHHHHHHHHhHh
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV-------VGTLCVYAAICKHE 149 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~-------~~~~~i~~~l~~~~ 149 (309)
..+. ..+|...|.+++.++.+ ..+ +.++++||+.|+++........ .....-+.. .
T Consensus 166 -------~~~~Y~~sK~a~~~~~~~~~~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 231 (274)
T 1ja9_A 166 -------NHALYAGSKAAVEGFCRAFAVDCGAKG---VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDE--G-- 231 (274)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHH--H--
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCcccccchhcccccccccccccCchHHHHH--H--
Confidence 0001 13455556655555432 246 9999999999988742100000 000000000 0
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~ 198 (309)
.+.+. ...++++++|+|+++++++..+. ..|++|||++|.
T Consensus 232 ------~~~~~---~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 232 ------LANMN---PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp ------HHHTS---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ------HHhcC---CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence 00011 23567899999999998886532 369999999874
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=2.6e-08 Score=87.58 Aligned_cols=148 Identities=9% Similarity=0.005 Sum_probs=91.4
Q ss_pred CCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... + +++.+++|+.|+.++++++. +. +.+|||++||...|... .
T Consensus 84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~~iv~isS~~~~~~~---------~ 152 (254)
T 2wsb_A 84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR--GAGAIVNLGSMSGTIVN---------R 152 (254)
T ss_dssp SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC---------S
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEecchhccCC---------C
Confidence 578999999984321 2 24567899999777777653 33 46899999998777421 0
Q ss_pred CCCCCCCCCCCCc-c--cchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNV-T--NFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. .|. + .+|.+.|.+++.++.+ ..+ ++++++||+.|+++......... ..+..+.+ ..|
T Consensus 153 ~---------~~~~~Y~~sK~a~~~~~~~~~~~~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~--~~~ 215 (254)
T 2wsb_A 153 P---------QFASSYMASKGAVHQLTRALAAEWAGRG---VRVNALAPGYVATEMTLKMRERP---ELFETWLD--MTP 215 (254)
T ss_dssp S---------SCBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCSHHHHHHHTCH---HHHHHHHH--TST
T ss_pred C---------CcchHHHHHHHHHHHHHHHHHHHHhhcC---eEEEEEEecccCchhhhccccCh---HHHHHHHh--cCC
Confidence 1 111 1 3344555555544432 247 99999999999997532110000 01111111 111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+.+++|+|+++++++..+ ...|+.++|.+|.
T Consensus 216 ------------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 216 ------------MGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp ------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ------------CCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence 134678999999999888643 3469999998774
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.2e-08 Score=89.43 Aligned_cols=147 Identities=12% Similarity=-0.013 Sum_probs=85.6
Q ss_pred CCccEEEEeecccC---------CChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCc-cccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASR---------PTEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGK-HYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---------~~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~-vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|+... .++++.+++|+.|+.++++++... ..+.+|||++||.. .||.+ .
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~ 151 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA----------G 151 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC----------C
Confidence 36899999998431 144668899999999888887542 01468999999974 44421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
... ..+|.+.|.+++.++.+ ..+ +.++++||+.|.++........ ....+. .+.|
T Consensus 152 ---------~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~--- 209 (247)
T 2hq1_A 152 ---------QANYAASKAGLIGFTKSIAKEFAAKG---IYCNAVAPGIIKTDMTDVLPDK-----VKEMYL--NNIP--- 209 (247)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHTSCHH-----HHHHHH--TTST---
T ss_pred ---------CcHhHHHHHHHHHHHHHHHHHHHHcC---cEEEEEEEEEEeccchhhcchH-----HHHHHH--hhCC---
Confidence 000 13344455555544432 246 9999999999987632111110 000110 1111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+.+++|+|+++++++..+ ...|++|||++|.
T Consensus 210 ---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 210 ---------LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ---------CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence 134678999999998888643 3469999999875
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.5e-08 Score=90.88 Aligned_cols=158 Identities=9% Similarity=-0.042 Sum_probs=96.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|++||+|++... ++++.+++|+.|+.++++++. +. +-.|||++||...+...
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~---------- 165 (281)
T 3s55_A 98 GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR--NYGRIVTVSSMLGHSAN---------- 165 (281)
T ss_dssp TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGGSCC----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEECChhhcCCC----------
Confidence 468999999985321 334577999999999999963 33 35799999998766421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce-
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL- 153 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~- 153 (309)
. .... ..+|.+.+.+.+.++.+ ..+ +.++.++|+.|++|......... .+......+.
T Consensus 166 ~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~ 227 (281)
T 3s55_A 166 F--------AQASYVSSKWGVIGLTKCAAHDLVGYG---ITVNAVAPGNIETPMTHNDFVFG-------TMRPDLEKPTL 227 (281)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHTGGGT---EEEEEEEECSBCSTTTSSHHHHH-------C-------CCH
T ss_pred C--------CCchhHHHHHHHHHHHHHHHHHHhhcC---cEEEEEecCcccCccccchhhhc-------cccccccccch
Confidence 0 0000 13344455555554442 247 99999999999998653311000 0000000000
Q ss_pred -----eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 154 -----LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 154 -----~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
.+.+... ....+.+++|+|+++++++..+ ...|+++||.+|...+
T Consensus 228 ~~~~~~~~~~~~---~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 228 KDVESVFASLHL---QYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp HHHHHHHHHHCS---SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hHHHHHHHhhhc---cCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 0000011 2256789999999999988653 3459999999987654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=2.7e-09 Score=94.22 Aligned_cols=154 Identities=8% Similarity=-0.039 Sum_probs=94.5
Q ss_pred CCccEEEEeecc-cCCChHHHHHhHHHHHHHHHHHhCcCC-----CCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWA-SRPTEAENCEVNGAMLRNVLRSVIPNA-----PNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 11 ~~vd~V~H~A~~-~~~~~~~~~~vNv~gt~nll~a~~~~~-----~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
.++|+|||+|+. ...++++.+++|+.|+.++++++...- ..-.|||++||...|... .
T Consensus 83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~------ 146 (254)
T 1sby_A 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI----------H------ 146 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------T------
T ss_pred CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC----------C------
Confidence 468999999995 445788899999999999999875421 013579999998777521 0
Q ss_pred CCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccc
Q 045430 85 LPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDC 161 (309)
Q Consensus 85 ~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~ 161 (309)
.... ..+|.+.+.+.+.++.+ ..+ +.++++||+.|.++...+..........+..+ .
T Consensus 147 --~~~~Y~~sK~a~~~~~~~la~~~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---~------------ 206 (254)
T 1sby_A 147 --QVPVYSASKAAVVSFTNSLAKLAPITG---VTAYSINPGITRTPLVHTFNSWLDVEPRVAEL---L------------ 206 (254)
T ss_dssp --TSHHHHHHHHHHHHHHHHHHHHHHHHS---EEEEEEEECSEESHHHHSCCCGGGSCTTHHHH---H------------
T ss_pred --CchHHHHHHHHHHHHHHHHHHHhccCC---eEEEEEecCCccCccccccchhhhhhHHHHHH---H------------
Confidence 0000 13344455554444332 147 99999999999987422110000000000000 0
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCC--CcccHH
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNG--DVFKWK 203 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g--~~~s~~ 203 (309)
....+.+++|+|++++.++.. ...|+.|++.+| .+++|.
T Consensus 207 --~~~~~~~~~dvA~~i~~~~~~-~~~G~~~~v~gG~~~~~~~~ 247 (254)
T 1sby_A 207 --LSHPTQTSEQCGQNFVKAIEA-NKNGAIWKLDLGTLEAIEWT 247 (254)
T ss_dssp --TTSCCEEHHHHHHHHHHHHHH-CCTTCEEEEETTEEEECCCC
T ss_pred --hcCCCCCHHHHHHHHHHHHHc-CCCCCEEEEeCCceeEeccc
Confidence 001223789999999888863 456999999988 445543
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.77 E-value=4.2e-09 Score=93.82 Aligned_cols=163 Identities=9% Similarity=-0.055 Sum_probs=97.7
Q ss_pred CCccEEEEeeccc-CCChHHHHHhHHH----HHHHHHHHhCcCCC-CCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-RPTEAENCEVNGA----MLRNVLRSVIPNAP-NLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~~~~~~~~vNv~----gt~nll~a~~~~~~-~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
..+|+|||+|+.. ..++++.+++|+. ++++++.++++... +..|||++||...|... .
T Consensus 85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~------ 148 (267)
T 2gdz_A 85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----------A------ 148 (267)
T ss_dssp SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------T------
T ss_pred CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC----------C------
Confidence 3589999999954 4578889999988 45666777765421 25799999998777521 0
Q ss_pred CCCCCc-ccchHHHHHHHHHHH----HhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 85 LPRLNV-TNFYYTQEDILFEEV----EKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 85 ~p~~p~-p~~~y~~e~~~~~~~----~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
..+. ..+|.+.+.+.+..+ ....+ +.+++|||+.|.++........ .....+..+.+....++
T Consensus 149 --~~~~Y~~sK~a~~~~~~~~ala~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 216 (267)
T 2gdz_A 149 --QQPVYCASKHGIVGFTRSAALAANLMNSG---VRLNAICPGFVNTAILESIEKE-ENMGQYIEYKDHIKDMI------ 216 (267)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHHHHHTCC---EEEEEEEESCBSSHHHHGGGCH-HHHGGGGGGHHHHHHHH------
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHHhccCC---cEEEEEecCcCcchhhhccccc-cccchhhhHHHHHHHHh------
Confidence 0001 123444444444321 11257 9999999999987632111000 00000000000000000
Q ss_pred cccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHH
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHL 205 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el 205 (309)
....+.+++|+|+++++++..+...|++|+|++|+..++.|+
T Consensus 217 ----~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 217 ----KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp ----HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred ----ccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence 112467899999999998876667799999999998876553
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.8e-08 Score=89.56 Aligned_cols=154 Identities=12% Similarity=-0.028 Sum_probs=95.0
Q ss_pred CCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+... + ++++.+++|+.|+.++++++...-..-.|||++||...+...
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------- 154 (261)
T 2wyu_A 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---------- 154 (261)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC----------
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC----------
Confidence 47899999998432 1 334578999999999999997641001489999997665321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. ..+. ..+|.+.+.+.+.++.+ ..+ +.++++||+.|+++........-. ....+.+ ..|+
T Consensus 155 ~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~--~~p~- 217 (261)
T 2wyu_A 155 P--------KYNVMAIAKAALEASVRYLAYELGPKG---VRVNAISAGPVRTVAARSIPGFTK---MYDRVAQ--TAPL- 217 (261)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCCCCTGGGGCTTHHH---HHHHHHH--HSTT-
T ss_pred C--------CchHHHHHHHHHHHHHHHHHHHHhhhC---cEEEEEeeCCCcCchhhhccccHH---HHHHHHh--cCCC-
Confidence 0 0000 13345555555544432 247 999999999999985422111000 1111111 1222
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccH
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKW 202 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~ 202 (309)
..+.+++|+|+++++++..+ ...|+.|+|.+|...+.
T Consensus 218 -----------~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~ 256 (261)
T 2wyu_A 218 -----------RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG 256 (261)
T ss_dssp -----------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred -----------CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence 13457899999999888642 34599999999876543
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.4e-08 Score=91.18 Aligned_cols=167 Identities=13% Similarity=0.105 Sum_probs=99.2
Q ss_pred CCccEEEEeecccCC-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++...-.+-.+||++||...+... ...|..|
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~~~ 168 (287)
T 3pxx_A 98 GKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAA---------AQPPGAG 168 (287)
T ss_dssp SCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHH---------HCCC---
T ss_pred CCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccc---------ccccccc
Confidence 468999999985321 445678999999999999997653234589999998887542 1334444
Q ss_pred CCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc----
Q 045430 84 DLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP---- 152 (309)
Q Consensus 84 ~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~---- 152 (309)
+.+.. +.+-|...| +.+..+.+ ..+ +.+..|+|+.|..+...+.. .+..+......+
T Consensus 169 ~~~~~--~~~~Y~asK~a~~~~~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~~~~ 236 (287)
T 3pxx_A 169 GPQGP--GGAGYSYAKQLVDSYTLQLAAQLAPQS---IRANVIHPTNVNTDMLNSAP-------MYRQFRPDLEAPSRAD 236 (287)
T ss_dssp --CHH--HHHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEESSBSSTTTSSHH-------HHHHHCTTSSSCCHHH
T ss_pred ccCCC--ccchHHHHHHHHHHHHHHHHHHHhhcC---cEEEEEecCccccccccccc-------hhhhhccccccchhHH
Confidence 43321 122355444 44433332 247 99999999999987543211 000000000000
Q ss_pred --eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 153 --LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 153 --~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
..+..... ....+.+++|+|+++++++... ...|++++|.+|...+
T Consensus 237 ~~~~~~~~~~---~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 237 ALLAFPAMQA---MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp HHHHGGGGCS---SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred HHhhhhhhcc---cCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 00000000 1146778999999999888543 3569999999987654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.74 E-value=8.4e-09 Score=91.21 Aligned_cols=155 Identities=12% Similarity=0.066 Sum_probs=94.7
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...+|+|||+|+.... ++++.+++|+.|+.++++++... ....+|||++||..++...
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 159 (265)
T 1h5q_A 90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN---------- 159 (265)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc----------
Confidence 4468999999985321 23446899999999999998543 1124789999998776421
Q ss_pred CCCCCCCCCCCCc-c--cchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNV-T--NFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
..+. .+..|. + .+|.+.+.+++.++.+ ..+ +.++++||+.|+++......... ...+. ...|
T Consensus 160 ~~~~---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~--~~~~ 226 (265)
T 1h5q_A 160 QSSL---NGSLTQVFYNSSKAACSNLVKGLAAEWASAG---IRVNALSPGYVNTDQTAHMDKKI-----RDHQA--SNIP 226 (265)
T ss_dssp EEET---TEECSCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCGGGGGSCHHH-----HHHHH--HTCT
T ss_pred cccc---cccccccccHHHHHHHHHHHHHHHHHHHhcC---cEEEEEecCccccccccccchhH-----HHHHH--hcCc
Confidence 0000 111111 1 2344445555444432 247 99999999999998543221111 01111 1112
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+ ..+.+++|+|+++++++..+ ...|+.|+|.+|..
T Consensus 227 ~------------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 227 L------------NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp T------------SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred c------------cCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence 1 23567889999999888653 35699999998864
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.2e-08 Score=89.77 Aligned_cols=149 Identities=11% Similarity=0.096 Sum_probs=93.1
Q ss_pred CCccEEEEeecc-cCC------C---hHHHHHhHHHHHHHHHHHhCcCC-------CCCceEEEEeCCccccCCccccCC
Q 045430 11 TDVTHIFYVTWA-SRP------T---EAENCEVNGAMLRNVLRSVIPNA-------PNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 11 ~~vd~V~H~A~~-~~~------~---~~~~~~vNv~gt~nll~a~~~~~-------~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
.++|+|||+|+. ... + +++.+++|+.|+.++++++...- ....+||++||...+..+
T Consensus 84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 157 (258)
T 3afn_B 84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG------ 157 (258)
T ss_dssp SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC------
T ss_pred CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC------
Confidence 368999999985 321 2 34477999999999998775320 012789999998665411
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
. +.... ..+|.+.|.+++.++.+ ..+ +.++++||+.|+++........ ....+. .+
T Consensus 158 ----~-------~~~~~Y~~sK~a~~~~~~~~~~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~ 216 (258)
T 3afn_B 158 ----G-------PGAGLYGAAKAFLHNVHKNWVDFHTKDG---VRFNIVSPGTVDTAFHADKTQD-----VRDRIS--NG 216 (258)
T ss_dssp ----C-------TTCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBSSGGGTTCCHH-----HHHHHH--TT
T ss_pred ----C-------CCchHHHHHHHHHHHHHHHHHHhhcccC---eEEEEEeCCCcccccccccCHH-----HHHHHh--cc
Confidence 0 00000 13345555555554432 247 9999999999999865432111 111111 12
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC---CCCCcceeecCCC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP---YARNEAFNCSNGD 198 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~~g~ 198 (309)
.| ...+.+++|+|+++++++..+ ...|+.|||.+|.
T Consensus 217 ~~------------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 217 IP------------MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp CT------------TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred CC------------CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 22 235778999999999888643 3459999999876
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=2.2e-08 Score=88.79 Aligned_cols=153 Identities=9% Similarity=-0.023 Sum_probs=94.2
Q ss_pred CCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|+... + ++++.+++|+.|+.++++++... ..+.+|||++||...|... .
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 159 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF----------P 159 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------T
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC----------C
Confidence 46899999998532 1 23457899999999998887421 0146899999998777521 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|.++........-. ....+.. +.
T Consensus 160 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~--~~---- 219 (260)
T 2zat_A 160 --------NLGPYNVSKTALLGLTKNLAVELAPRN---IRVNCLAPGLIKTNFSQVLWMDKA---RKEYMKE--SL---- 219 (260)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSSTTHHHHSSHH---HHHHHHH--HH----
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHhcccC---eEEEEEEECcccCccchhcccChH---HHHHHHh--cC----
Confidence 0000 12344455555544432 247 999999999998764211000000 0000000 00
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
....+.+++|+|+++++++..+ ...|++|+|.+|..+|
T Consensus 220 --------~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 220 --------RIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp --------TCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred --------CCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence 1234678899999998888643 2469999999998765
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=9e-08 Score=85.06 Aligned_cols=156 Identities=6% Similarity=-0.086 Sum_probs=96.5
Q ss_pred cCCCCccEEEEeecccC-----------C---ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCC
Q 045430 8 SKLTDVTHIFYVTWASR-----------P---TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~-----------~---~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
+...++|+|||+|++.. . +++..+++|+.|+.++++++...-..-.|||++||...|...
T Consensus 83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------ 156 (265)
T 1qsg_A 83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI------ 156 (265)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------
T ss_pred HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC------
Confidence 34557999999998532 2 234478999999999999997641111489999997666321
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
.. ... ..+|.+.+.+.+.++.+ ..+ +.++++||+.|+++......... ..+..+.+ +
T Consensus 157 ---~~---------~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~--~ 216 (265)
T 1qsg_A 157 ---PN---------YNVMGLAKASLEANVRYMANAMGPEG---VRVNAISAGPIRTLAASGIKDFR---KMLAHCEA--V 216 (265)
T ss_dssp ---TT---------TTHHHHHHHHHHHHHHHHHHHHTTTT---EEEEEEEECCCCCTTGGGSTTHH---HHHHHHHH--H
T ss_pred ---CC---------chHHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEEeCCCccchhhcccccH---HHHHHHHh--c
Confidence 00 001 13345555555544432 246 99999999999998542211100 01111111 1
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
.|+ ..+.+++|+|+++++++..+ ...|+.|+|.+|...+
T Consensus 217 ~p~------------~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 217 TPI------------RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp STT------------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred CCC------------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 222 13457899999999888643 2459999999986543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.72 E-value=1.1e-07 Score=85.52 Aligned_cols=152 Identities=11% Similarity=-0.010 Sum_probs=93.2
Q ss_pred CCCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCC-CCceEEEEeCCccccCCccccCCCC
Q 045430 10 LTDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAP-NLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~-~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
..++|+|||+|++.. + ++++.+++|+.|+.++++++...-. .-.|||++||...+...
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 168 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV-------- 168 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC--------
T ss_pred cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC--------
Confidence 347899999998432 1 2345789999999999999876410 12699999997665421
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. .... ..+|.+.+.+.+.++.+ ..+ +.+++|+|+.|+++.......... ....+.+ ..|
T Consensus 169 --~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~--~~p 230 (285)
T 2p91_A 169 --P--------HYNVMGIAKAALESTVRYLAYDIAKHG---HRINAISAGPVKTLAAYSITGFHL---LMEHTTK--VNP 230 (285)
T ss_dssp --T--------TTTHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCCCCSCC--CTTHHH---HHHHHHH--HST
T ss_pred --C--------CccHHHHHHHHHHHHHHHHHHHhcccC---cEEEEEEeCcccCchhhcccchHH---HHHHHHh--cCC
Confidence 0 0001 13345555555444432 247 999999999999986432211100 1111111 112
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+ ..+..++|+|+++++++..+ ...|+.|++.+|..
T Consensus 231 ~------------~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~ 267 (285)
T 2p91_A 231 F------------GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYH 267 (285)
T ss_dssp T------------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred C------------CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence 1 12457899999999988642 34599999998853
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.72 E-value=5.9e-08 Score=87.31 Aligned_cols=159 Identities=9% Similarity=-0.068 Sum_probs=91.0
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|++... +++..+++|+.|+.++++++. +. +..|||++||...+...
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS~~~~~~~--------- 170 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK--GWGRIINIASAHGLVAS--------- 170 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC---------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEECCcccccCC---------
Confidence 4578999999985321 234578999999999999973 33 35789999998666321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|+++.......... ....+.. .....
T Consensus 171 -~--------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~~-~~~~~ 234 (281)
T 3v2h_A 171 -P--------FKSAYVAAKHGIMGLTKTVALEVAESG---VTVNSICPGYVLTPLVEKQIPDQA---RTRGITE-EQVIN 234 (281)
T ss_dssp -T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCC---------------------------
T ss_pred -C--------CchHHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEECCCCcCcchhhhcchhh---hhcCCCH-HHHHH
Confidence 0 0000 12344444444444432 247 999999999999975432211000 0000000 00000
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~ 198 (309)
...+.+. ....+.+++|+|+++++++..+. ..|++++|.+|.
T Consensus 235 ~~~~~~~---p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 235 EVMLKGQ---PTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp -----CC---TTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred HHHHhcC---CCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 1112222 45678999999999999886542 469999999874
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.72 E-value=5.2e-08 Score=86.36 Aligned_cols=150 Identities=9% Similarity=-0.045 Sum_probs=93.5
Q ss_pred CCccEEEEeecc--cCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 11 TDVTHIFYVTWA--SRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 11 ~~vd~V~H~A~~--~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
.++|+|||+|+. ... ++++.+++|+.|+.++++++ ++. +..|||++||..+++..
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~iss~~~~~~~-------- 153 (264)
T 3i4f_A 84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ--NFGRIINYGFQGADSAP-------- 153 (264)
T ss_dssp SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCTTGGGCC--------
T ss_pred CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc--CCCeEEEEeechhcccC--------
Confidence 468999999993 211 23456899999999999998 444 45899999998666432
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
..| .... ..+|.+.+.+.+.++.+ ..+ +.+++++|+.|+++......... .+.....
T Consensus 154 --~~~------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~ 213 (264)
T 3i4f_A 154 --GWI------YRSAFAAAKVGLVSLTKTVAYEEAEYG---ITANMVCPGDIIGEMKEATIQEA---------RQLKEHN 213 (264)
T ss_dssp --CCT------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCCCGGGGSCCHHHH---------HHC----
T ss_pred --CCC------CCchhHHHHHHHHHHHHHHHHHhhhcC---cEEEEEccCCccCccchhccHHH---------HHHHhhc
Confidence 110 0000 12344444444444332 257 99999999999998654332211 0100001
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
. ....+..++|+|+++++++..+ ...||+++|.+|-..
T Consensus 214 ~----------p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~ 253 (264)
T 3i4f_A 214 T----------PIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV 253 (264)
T ss_dssp --------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred C----------CCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence 1 1234568899999999888643 346999999988653
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.70 E-value=4.5e-08 Score=88.53 Aligned_cols=153 Identities=6% Similarity=-0.078 Sum_probs=91.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++... ..+..|||++||...++.+ .
T Consensus 99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~- 167 (303)
T 1yxm_A 99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP----------L- 167 (303)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT----------T-
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCC----------c-
Confidence 358999999984221 23456899999999999997542 0124789999998733211 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccC-CCcchhHHHHHHHHHHHhHhCCceee
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSP-YSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~-~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+|+.. .+...... ...+ .+ .
T Consensus 168 --------~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~------~~~~----~~-~ 225 (303)
T 1yxm_A 168 --------AVHSGAARAGVYNLTKSLALEWACSG---IRINCVAPGVIYSQTAVENYGSWGQ------SFFE----GS-F 225 (303)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHTGGGT---EEEEEEEECSBCCTGGGTTSGGGGG------GGGT----TG-G
T ss_pred --------chhhHHHHHHHHHHHHHHHHHhcccC---eEEEEEecCCcccchhhhhccccch------HHHH----HH-H
Confidence 000 12233334443333322 247 9999999999999842 11110000 0000 00 0
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
... ....+.+++|+|+++++++..+ ...|+.++|.+|...+
T Consensus 226 ~~~-----p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 226 QKI-----PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp GGS-----TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred hcC-----cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence 000 1124678999999999888643 3469999999987654
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.70 E-value=2e-08 Score=89.69 Aligned_cols=154 Identities=9% Similarity=-0.042 Sum_probs=93.7
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++ ++. +..|||++||...|...
T Consensus 93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~iv~isS~~~~~~~---------- 160 (266)
T 3uxy_A 93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA--GGGAIVNVASCWGLRPG---------- 160 (266)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCSBTTBCC----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEECCHHhCCCC----------
Confidence 468999999995321 33456789999999999998 443 35799999998666321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH--HHHHHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV--GTLCVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~--~~~~i~~~l~~~~g~~ 152 (309)
| .... ..+|.+.+.+.+.++.+ ..+ +.++.++|+.|+++......... ..-.....+. ...
T Consensus 161 --~------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~- 226 (266)
T 3uxy_A 161 --P------GHALYCLTKAALASLTQCMGMDHAPQG---IRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELG--RTV- 226 (266)
T ss_dssp --T------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHH--TTS-
T ss_pred --C------CChHHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEeeCCCcchHhhhhhhcccccchHHHHHHH--hcC-
Confidence 0 0000 12344444444444432 247 99999999999887421110000 0000000000 011
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
....+.+++|+|+++++++..+ ...|++++|.+|..+|
T Consensus 227 -----------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 227 -----------PLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp -----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred -----------CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence 2245678999999999988653 3459999999987653
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.69 E-value=1.1e-07 Score=83.97 Aligned_cols=155 Identities=9% Similarity=-0.039 Sum_probs=91.2
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... ++++.+++|+.|+.++.+++ ++. +..|||++||...|...
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~---------- 145 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR--NWGRIINIASVHGLVGS---------- 145 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECCGGGTSCC----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEEcCchhccCC----------
Confidence 368999999985321 33457899999766665554 444 46899999998776421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHH---HHHHHhHhCC
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCV---YAAICKHEGV 151 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i---~~~l~~~~g~ 151 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+++........ . -.. .......
T Consensus 146 ~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~-~-~~~~~~~~~~~~~--- 209 (255)
T 2q2v_A 146 T--------GKAAYVAAKHGVVGLTKVVGLETATSN---VTCNAICPGWVLTPLVQKQIDD-R-AANGGDPLQAQHD--- 209 (255)
T ss_dssp T--------TBHHHHHHHHHHHHHHHHHHHHTTTSS---EEEEEEEESSBCCHHHHHHHHH-H-HHHTCCHHHHHHH---
T ss_pred C--------CchhHHHHHHHHHHHHHHHHHHhcccC---cEEEEEeeCCCcCcchhhhccc-c-cccccchHHHHHH---
Confidence 0 0000 12344445555544432 246 9999999999998743211000 0 000 0000000
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDV 199 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~ 199 (309)
+.+... ....+.+++|+|+++++++..+. ..|+.|+|.+|..
T Consensus 210 ---~~~~~~---p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 210 ---LLAEKQ---PSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp ---HHTTTC---TTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred ---HHhccC---CCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 001111 22457899999999998886432 4599999998854
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=8e-08 Score=85.32 Aligned_cols=143 Identities=10% Similarity=0.031 Sum_probs=90.6
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++ ++. +..|||++||...|...
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~---------- 147 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA--GRGSIINISSIEGLAGT---------- 147 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCEEEEEeehhhcCCC----------
Confidence 368999999984321 33457899999996665554 443 46899999998776421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+++... . . ...+.
T Consensus 148 ~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~-~-~---------------~~~~~ 199 (260)
T 1nff_A 148 V--------ACHGYTATKFAVRGLTKSTALELGPSG---IRVNSIHPGLVKTPMTD-W-V---------------PEDIF 199 (260)
T ss_dssp T--------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCSGGGT-T-S---------------CTTCS
T ss_pred C--------CchhHHHHHHHHHHHHHHHHHHhCccC---cEEEEEEeCCCCCCccc-c-c---------------hhhHH
Confidence 0 0000 12344455555444432 247 99999999999997532 1 0 00000
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.. ....+.+++|+|+++++++..+ ...|+.|+|.+|...
T Consensus 200 --~~-----~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 200 --QT-----ALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA 240 (260)
T ss_dssp --CC-----SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred --hC-----ccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 00 1234678999999999888643 245999999988654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=9.4e-08 Score=85.41 Aligned_cols=147 Identities=10% Similarity=-0.013 Sum_probs=92.9
Q ss_pred CCccEEEEeeccc-C-C---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 11 TDVTHIFYVTWAS-R-P---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~-~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
.++|++||+|+.. . . ++++.+++|+.|+.++++++ ++. +-.|||++||...+...
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~iv~isS~~~~~~~-------- 153 (271)
T 3tzq_B 84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA--GGGAIVNISSATAHAAY-------- 153 (271)
T ss_dssp SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCEEEEEECCGGGTSBC--------
T ss_pred CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEECCHHHcCCC--------
Confidence 4689999999853 2 1 23457899999999999998 444 45799999998776421
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|+++.....+..- ....+. ...+
T Consensus 154 --~--------~~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~~----~~~~~~--~~~~ 214 (271)
T 3tzq_B 154 --D--------MSTAYACTKAAIETLTRYVATQYGRHG---VRCNAIAPGLVRTPRLEVGLPQP----IVDIFA--THHL 214 (271)
T ss_dssp --S--------SCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCCTTTC---CHH----HHHHHH--TTST
T ss_pred --C--------CChHHHHHHHHHHHHHHHHHHHHhhcC---EEEEEEEeCCCcCccccccCCHH----HHHHHH--hcCC
Confidence 0 0000 12344445554444432 257 99999999999998654221110 111111 1111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+ .-+...+|+|+++++++..+ ...|++++|.+|.
T Consensus 215 ~------------~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 250 (271)
T 3tzq_B 215 A------------GRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL 250 (271)
T ss_dssp T------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred C------------CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence 1 23457899999999888643 3469999999883
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=8.9e-08 Score=84.85 Aligned_cols=156 Identities=6% Similarity=-0.074 Sum_probs=94.1
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 154 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV----------P- 154 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------C-
Confidence 468999999985321 33457899999999999998421 0146899999998666421 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+++++|+.|.++..............+..+. ...
T Consensus 155 -------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~----- 217 (260)
T 2ae2_A 155 -------YEAVYGATKGAMDQLTRCLAFEWAKDN---IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI--DRC----- 217 (260)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHTGGGT---EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH--HTS-----
T ss_pred -------CcchHHHHHHHHHHHHHHHHHHHhhcC---cEEEEEecCCCCCcchhhhccChhhHHHHHHHH--hcC-----
Confidence 0000 13345555555555442 246 999999999998763211000000000000110 011
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
....+.+++|+|+++++++..+ ...|+.++|.+|...+
T Consensus 218 -------~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 218 -------ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMAN 257 (260)
T ss_dssp -------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred -------CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcccc
Confidence 1235678999999999888643 2469999999886543
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.69 E-value=6e-08 Score=87.20 Aligned_cols=149 Identities=10% Similarity=0.032 Sum_probs=89.6
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|+.... ++++.+++|+.|+.++++++... ..+.+|||++||...+... .
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~ 188 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----------V 188 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------C
Confidence 3578999999985321 33457899999988887776531 0146899999998766421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+++.++.+ ..+ +.++++||+.|+++......... ...+. ...|
T Consensus 189 --------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~--~~~~--- 247 (285)
T 2c07_A 189 --------GQANYSSSKAGVIGFTKSLAKELASRN---ITVNAIAPGFISSDMTDKISEQI-----KKNII--SNIP--- 247 (285)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCC-----CCHHH-----HHHHH--TTCT---
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHHHhC---cEEEEEEeCcEecCchhhcCHHH-----HHHHH--hhCC---
Confidence 0000 12344444444444332 247 99999999999987543221110 00110 1111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+.+++|+|+++++++..+ ...|+.|+|.+|.
T Consensus 248 ---------~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 248 ---------AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred ---------CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence 123678999999999888653 2469999998875
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.68 E-value=3.6e-08 Score=88.42 Aligned_cols=152 Identities=11% Similarity=0.038 Sum_probs=94.0
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|++... +++..+++|+.|+.++++++. +. +..|||++||...+...
T Consensus 104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~IV~isS~~~~~~~--------- 172 (273)
T 3uf0_A 104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH--GSGRIVTIASMLSFQGG--------- 172 (273)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC---------
T ss_pred cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEEcchHhcCCC---------
Confidence 3478999999985322 334578999999999999873 33 35799999998766421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
.. ... ..+|.+.+.+.+.++.+ ..+ +.+..|+|+.|+++........-. ....+.+ ..|+
T Consensus 173 ~~---------~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~ 235 (273)
T 3uf0_A 173 RN---------VAAYAASKHAVVGLTRALASEWAGRG---VGVNALAPGYVVTANTAALRADDE---RAAEITA--RIPA 235 (273)
T ss_dssp SS---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSGGGHHHHTSHH---HHHHHHH--HSTT
T ss_pred CC---------ChhHHHHHHHHHHHHHHHHHHHhhcC---cEEEEEEeCCCcCCchhhcccCHH---HHHHHHh--cCCC
Confidence 00 000 12344445454444432 257 999999999999875321110000 0011111 1121
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
..+..++|+|+++++++..+ ...||+++|.+|...|
T Consensus 236 ------------~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~s 273 (273)
T 3uf0_A 236 ------------GRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLAS 273 (273)
T ss_dssp ------------SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred ------------CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccCC
Confidence 24556888999999888642 3569999999987543
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.68 E-value=4.9e-08 Score=86.42 Aligned_cols=158 Identities=7% Similarity=-0.079 Sum_probs=94.2
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 76 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~- 144 (256)
T 2d1y_A 76 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----------Q- 144 (256)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------C-
Confidence 468999999984321 23457899999999998887432 1146899999998665321 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+.++.+ ..+ +.+++++|+.|.++....... ..... .......
T Consensus 145 -------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~--------~~~~~--~~~~~~~ 204 (256)
T 2d1y_A 145 -------ENAAYNASKGGLVNLTRSLALDLAPLR---IRVNAVAPGAIATEAVLEAIA--------LSPDP--ERTRRDW 204 (256)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHHHHC------------------CHHH
T ss_pred -------CChhHHHHHHHHHHHHHHHHHHHhhcC---eEEEEEeeCCccCchhhhccc--------cccCC--HHHHHHH
Confidence 0000 13344455555444432 246 999999999997753110000 00000 0000000
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccH
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKW 202 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~ 202 (309)
.... ....+.+++|+|+++++++..+ ...|+.|+|.+|...++
T Consensus 205 ~~~~---~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 205 EDLH---ALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp HTTS---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred HhcC---CCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence 0111 2346789999999999888653 34699999999876654
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.67 E-value=7.6e-08 Score=85.87 Aligned_cols=150 Identities=11% Similarity=0.011 Sum_probs=87.0
Q ss_pred CCccEEEEeecccCC----------ChHHHHHhHHHHHHHHHHHhCcC-----CCCCceEEEEeCCccccCCccccCCCC
Q 045430 11 TDVTHIFYVTWASRP----------TEAENCEVNGAMLRNVLRSVIPN-----APNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~-----~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++... ..+-.+||++||...+...
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 174 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS-------- 174 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC--------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC--------
Confidence 468999999985321 23457899999999998887543 1124689999998776421
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
.. .... ..+|.+.+.+++.++.+ ..+ +.++.++|+.|+++........ ...+ .
T Consensus 175 --~~-------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~--------~~~~----~ 230 (272)
T 4e3z_A 175 --AT-------QYVDYAASKAAIDTFTIGLAREVAAEG---IRVNAVRPGIIETDLHASGGLP--------DRAR----E 230 (272)
T ss_dssp --TT-------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBC---------------------------
T ss_pred --CC-------CcchhHHHHHHHHHHHHHHHHHHHHcC---cEEEEEecCCCcCCcccccCCh--------HHHH----H
Confidence 00 0000 12344445444444432 247 9999999999998754221000 0000 0
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+ ..+. ....+..++|+|+++++++..+ ...|++|||.+|.
T Consensus 231 ~-~~~~-----~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~ 272 (272)
T 4e3z_A 231 M-APSV-----PMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGGR 272 (272)
T ss_dssp ----CC-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred H-hhcC-----CcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence 0 0111 1233557999999999988643 3459999999874
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.3e-07 Score=83.33 Aligned_cols=157 Identities=9% Similarity=-0.064 Sum_probs=85.7
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|+.... ++++.+++|+.|+.++++++ ++. +..|||++||...+...
T Consensus 72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~~g~iv~isS~~~~~~~--------- 140 (250)
T 2fwm_X 72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ--RGGAIVTVASDAAHTPR--------- 140 (250)
T ss_dssp CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCC---------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc--CCCEEEEECchhhCCCC---------
Confidence 4578999999985321 34557899999999999988 333 45799999998766421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHH-HHHhHhCCc
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYA-AICKHEGVP 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~-~l~~~~g~~ 152 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+++........-. ... .+.. ....
T Consensus 141 -~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~-~~~~ 204 (250)
T 2fwm_X 141 -I--------GMSAYGASKAALKSLALSVGLELAGSG---VRCNVVSPGSTDTDMQRTLWVSDD---AEEQRIRG-FGEQ 204 (250)
T ss_dssp -T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCC-----------------------------
T ss_pred -C--------CCchHHHHHHHHHHHHHHHHHHhCccC---CEEEEEECCcccCccccccccChh---HHHHHHhh-hhhc
Confidence 0 0000 12344455554444432 247 999999999999975422110000 000 0000 0000
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..... ....+...+|+|+++++++..+ ...|+.++|.+|..
T Consensus 205 ---~~~~~---p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 205 ---FKLGI---PLGKIARPQEIANTILFLASDLASHITLQDIVVDGGST 247 (250)
T ss_dssp -----------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred ---ccccC---CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 00000 1123668999999999888653 35699999998854
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=9.6e-08 Score=85.25 Aligned_cols=148 Identities=14% Similarity=0.047 Sum_probs=91.9
Q ss_pred CCccEEEEeecccCC------C--------------hHHHHHhHHHHHHHHHHHhCcCC-CCC------ceEEEEeCCcc
Q 045430 11 TDVTHIFYVTWASRP------T--------------EAENCEVNGAMLRNVLRSVIPNA-PNL------RHVCLQTGGKH 63 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~--------------~~~~~~vNv~gt~nll~a~~~~~-~~v------~r~v~~Ss~~v 63 (309)
.++|+|||+|++... + ++..+++|+.|+.++++++...- .+. .|||++||...
T Consensus 93 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 172 (276)
T 1mxh_A 93 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT 172 (276)
T ss_dssp SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhh
Confidence 368999999984321 1 23478999999999999987641 133 79999999877
Q ss_pred ccCCccccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHH
Q 045430 64 YVGPFESFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLC 140 (309)
Q Consensus 64 YG~~~~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~ 140 (309)
|... . .... ..+|.+.+.+.+.++.+ ..+ +.+++|||+.|+++ . ......
T Consensus 173 ~~~~----------~--------~~~~Y~asK~a~~~l~~~la~e~~~~g---i~v~~v~PG~v~t~-~-~~~~~~---- 225 (276)
T 1mxh_A 173 DLPL----------P--------GFCVYTMAKHALGGLTRAAALELAPRH---IRVNAVAPGLSLLP-P-AMPQET---- 225 (276)
T ss_dssp GSCC----------T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBSCC-S-SSCHHH----
T ss_pred cCCC----------C--------CCeehHHHHHHHHHHHHHHHHHHhhcC---eEEEEEecCcccCC-c-cCCHHH----
Confidence 6421 0 0000 12344445454444432 247 99999999999998 2 221110
Q ss_pred HHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 141 VYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 141 i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
...+. ...|+ .+++.+++|+|+++++++..+ ...|+.|+|.+|..
T Consensus 226 -~~~~~--~~~p~-----------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 272 (276)
T 1mxh_A 226 -QEEYR--RKVPL-----------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272 (276)
T ss_dssp -HHHHH--TTCTT-----------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -HHHHH--hcCCC-----------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence 01111 11111 123678999999999988643 24599999998853
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.66 E-value=6.9e-08 Score=84.86 Aligned_cols=160 Identities=11% Similarity=0.024 Sum_probs=94.5
Q ss_pred HhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCC
Q 045430 5 AKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 5 ~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
+.++...++|+|||+|+.... ++++.+++|+.|+.++++++... ..+..|||++||...+...
T Consensus 67 ~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 140 (246)
T 2ag5_A 67 QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG------ 140 (246)
T ss_dssp HHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC------
T ss_pred HHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC------
Confidence 334445678999999985321 23456799999999999987531 0146899999998666421
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh-HHHHHHHHHHHhHh
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV-VGTLCVYAAICKHE 149 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~-~~~~~i~~~l~~~~ 149 (309)
.. .... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+++.....+.. ...-.....+.+
T Consensus 141 ----~~-------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-- 204 (246)
T 2ag5_A 141 ----VV-------NRCVYSTTKAAVIGLTKSVAADFIQQG---IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK-- 204 (246)
T ss_dssp ----CT-------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH--
T ss_pred ----CC-------CCccHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHh--
Confidence 10 0000 12344455555544432 247 9999999999999742110000 000000111111
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..|+ ..+..++|+|+++++++..+ ...|+.++|.+|.
T Consensus 205 ~~~~------------~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 205 RQKT------------GRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp TCTT------------SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred cCCC------------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 1111 13567899999999888643 3469999998874
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.65 E-value=1.6e-07 Score=82.33 Aligned_cols=152 Identities=9% Similarity=-0.007 Sum_probs=95.6
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|+|||+|++... ++++.+++|+.|+.++++++...- .+-.|||++||...+...
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 148 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN---------- 148 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC----------
Confidence 34568999999985322 334578999999999999875420 134699999998766421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+.......... ..+. .+.
T Consensus 149 ~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~-----~~~~--~~~--- 207 (247)
T 3lyl_A 149 P--------GQTNYCAAKAGVIGFSKSLAYEVASRN---ITVNVVAPGFIATDMTDKLTDEQK-----SFIA--TKI--- 207 (247)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCTTTTTSCHHHH-----HHHH--TTS---
T ss_pred C--------CcHHHHHHHHHHHHHHHHHHHHHHHcC---eEEEEEeeCcEecccchhccHHHH-----HHHh--hcC---
Confidence 0 0000 12344444444444432 257 999999999998875543322110 0010 111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
....+.+++|+|+++++++..+ ...||.|||.+|...
T Consensus 208 ---------~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 208 ---------PSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp ---------TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred ---------CCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 2245778999999999888643 346999999988654
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=2e-07 Score=82.63 Aligned_cols=152 Identities=7% Similarity=-0.091 Sum_probs=94.0
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..+|+|||+|+.... +++..+++|+.|+.++++++... ..+-.|||++||...+... .
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~- 149 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL----------E- 149 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC----------C-
Confidence 468999999984221 23446899999999999987321 1135799999998766421 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+.++.+ ..+ +.+..++|+.|..+........-. ....+.+ ..|
T Consensus 150 -------~~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p---- 210 (258)
T 3oid_A 150 -------NYTTVGVSKAALEALTRYLAVELSPKQ---IIVNAVSGGAIDTDALKHFPNRED---LLEDARQ--NTP---- 210 (258)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHTGGGT---EEEEEEEECCBCSGGGGGCTTHHH---HHHHHHH--HCT----
T ss_pred -------CcHHHHHHHHHHHHHHHHHHHHHhhcC---cEEEEEeeCCCcChhhhhcccCHH---HHHHHHh--cCC----
Confidence 0000 12344455555544442 246 999999999998874432211110 0111111 112
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
...+..++|+|+++++++..+ ...|++++|.+|...
T Consensus 211 --------~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 211 --------AGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp --------TSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred --------CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence 134567899999999988653 346999999988764
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.63 E-value=7.2e-08 Score=87.30 Aligned_cols=150 Identities=14% Similarity=0.098 Sum_probs=93.8
Q ss_pred CCccEEEEeecccC--C--------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR--P--------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.++|++||+|+... . ++++.+++|+.|+.++++++...-..-.|||++||...|... ..
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~---------~~-- 195 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS---------PH-- 195 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC---------TT--
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC---------CC--
Confidence 46899999998532 1 234578999999999999997652112489999999877531 00
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccC-C-CcchhHHHHHHHHHHHhHhCCceee
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSP-Y-SMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~-~-~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|+++.. . ..... .+..
T Consensus 196 -------~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~t~~~~~~~~~~~----------------~~~~ 249 (294)
T 3r3s_A 196 -------LLDYAATKAAILNYSRGLAKQVAEKG---IRVNIVAPGPIWTALQISGGQTQD----------------KIPQ 249 (294)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCSHHHHTTTSCGG----------------GSTT
T ss_pred -------chHHHHHHHHHHHHHHHHHHHHhhcC---eEEEEEecCcCccccccccCCCHH----------------HHHH
Confidence 000 12344444444444432 247 9999999999998741 0 00000 0000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
..... ....+..++|+|+++++++..+ ...|++++|.+|..+
T Consensus 250 ~~~~~---p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 250 FGQQT---PMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp TTTTS---TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHhcC---CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 11111 2234567888999999888643 356999999988754
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=6.1e-08 Score=85.57 Aligned_cols=151 Identities=12% Similarity=-0.024 Sum_probs=90.7
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CC-CceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PN-LRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~-v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++.... .+ ..|||++||...+...
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 152 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW----------- 152 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC-----------
Confidence 368999999984321 234578999999999888865430 02 5799999997555310
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
+.... ..+|.+.+.+.+.++.+ ..+ +.++++||+.|+++........ -.....+. ...|
T Consensus 153 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~--~~~~--- 214 (261)
T 1gee_A 153 -------PLFVHYAASKGGMKLMTETLALEYAPKG---IRVNNIGPGAINTPINAEKFAD---PEQRADVE--SMIP--- 214 (261)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCSGGGHHHHHS---HHHHHHHH--TTCT---
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHHhcccC---eEEEEEeeCCcCCchhhhcccC---hhHHHHHH--hcCC---
Confidence 00000 02333344444443332 247 9999999999999753211000 00011110 0111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
...+.+++|+|+++++++..+ ...|+.++|.+|..
T Consensus 215 ---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 215 ---------MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ---------CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence 134678999999999888643 34699999998864
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.1e-07 Score=84.14 Aligned_cols=152 Identities=11% Similarity=-0.016 Sum_probs=92.3
Q ss_pred CCccEEEEeecccCC-------------ChHHHHHhHHHHHHHHHHHhCcCC--------CCCceEEEEeCCccccCCcc
Q 045430 11 TDVTHIFYVTWASRP-------------TEAENCEVNGAMLRNVLRSVIPNA--------PNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~--------~~v~r~v~~Ss~~vYG~~~~ 69 (309)
.++|++||+|+.... ++++.+++|+.|+.++++++...- .+-.+||++||...+...
T Consensus 80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~-- 157 (257)
T 3tpc_A 80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ-- 157 (257)
T ss_dssp SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--
T ss_pred CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC--
Confidence 468999999985311 234568999999999999876430 134689999998777421
Q ss_pred ccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHH
Q 045430 70 SFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAIC 146 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~ 146 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|.++........ ..
T Consensus 158 --------~--------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~---------~~ 209 (257)
T 3tpc_A 158 --------I--------GQAAYAASKGGVAALTLPAARELARFG---IRVVTIAPGIFDTPMMAGMPQD---------VQ 209 (257)
T ss_dssp --------T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBSCC-------------------
T ss_pred --------C--------CCcchHHHHHHHHHHHHHHHHHHHHcC---eEEEEEEeCCCCChhhccCCHH---------HH
Confidence 0 0000 12344444444443332 257 9999999999988754222110 00
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCccc
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFK 201 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s 201 (309)
+......+.+ ..+..++|+|+++++++......||+++|.+|..++
T Consensus 210 ~~~~~~~p~~---------~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 210 DALAASVPFP---------PRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp ----CCSSSS---------CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred HHHHhcCCCC---------CCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence 1011111111 235678999999999887666779999999887653
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-07 Score=82.15 Aligned_cols=152 Identities=9% Similarity=-0.005 Sum_probs=91.6
Q ss_pred CCCCccEEEEeecccCC--------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP--------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
...++|+|||+|+.... +++..+++|+.|+.++++++... ..+..+||++||...+... .
T Consensus 96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~ 165 (260)
T 3gem_A 96 QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS----------S 165 (260)
T ss_dssp HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC----------S
T ss_pred hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC----------C
Confidence 34578999999984321 22347899999999999887432 1145799999998766421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+. .+ +.++.++|+.|..+...... ....+. ...|+
T Consensus 166 --------~~~~Y~asKaa~~~l~~~la~e~~~~---Irvn~v~PG~v~t~~~~~~~-------~~~~~~--~~~p~--- 222 (260)
T 3gem_A 166 --------KHIAYCATKAGLESLTLSFAARFAPL---VKVNGIAPALLMFQPKDDAA-------YRANAL--AKSAL--- 222 (260)
T ss_dssp --------SCHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECTTCC------------------------CCS---
T ss_pred --------CcHhHHHHHHHHHHHHHHHHHHHCCC---CEEEEEeecccccCCCCCHH-------HHHHHH--hcCCC---
Confidence 0000 123444455555555431 34 99999999999876432110 000000 11121
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccH
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKW 202 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~ 202 (309)
.-+..++|+|+++++++..+...|++++|.+|..+++
T Consensus 223 ---------~r~~~~edva~~v~~L~~~~~itG~~i~vdGG~~~~~ 259 (260)
T 3gem_A 223 ---------GIEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGRHVKG 259 (260)
T ss_dssp ---------CCCCCTHHHHHHHHHHHHCSSCCSCEEEESTTTTTC-
T ss_pred ---------CCCCCHHHHHHHHHHHhhCCCCCCCEEEECCCcccCC
Confidence 1234578999999998866667799999999987653
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=8.1e-08 Score=86.09 Aligned_cols=154 Identities=12% Similarity=-0.036 Sum_probs=92.6
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC----CCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA----PNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~----~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|+.... ++++.+++|+.|+.++++++.... .+..|||++||...+...
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------- 167 (277)
T 2rhc_B 97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV--------- 167 (277)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC---------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC---------
Confidence 4478999999985321 235578999999999999976530 135799999998655311
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHH------HHHHHHHHh
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGT------LCVYAAICK 147 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~------~~i~~~l~~ 147 (309)
+.... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|+++........... -..+..+.+
T Consensus 168 ---------~~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (277)
T 2rhc_B 168 ---------VHAAPYSASKHGVVGFTKALGLELARTG---ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA 235 (277)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHTTTE---EEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred ---------CCCccHHHHHHHHHHHHHHHHHHHHHhC---cEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh
Confidence 00000 12344455555544432 246 9999999999988642111000000 000000000
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+. ....+.+++|+|+++++++..+ ...|++|+|.+|.
T Consensus 236 --~~------------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 236 --RV------------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp --HS------------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred --cC------------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 01 1235778999999999888643 3469999999874
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.62 E-value=7.5e-08 Score=86.12 Aligned_cols=159 Identities=9% Similarity=0.009 Sum_probs=96.1
Q ss_pred CCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~ 82 (309)
.++|++||+|++... ++++.+++|+.|+.++++++... ...-.|||++||...+... ..
T Consensus 101 g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~--- 167 (278)
T 3sx2_A 101 GRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV----------GS--- 167 (278)
T ss_dssp CCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC----------CC---
T ss_pred CCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC----------cc---
Confidence 468999999995322 34567899999999999997532 1113689999998766421 10
Q ss_pred CCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 83 EDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 83 E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
+ .| +...|...| +.+.++.+ ..+ +.++.++|+.|+++........ ..+..... ...+...
T Consensus 168 ---~-~~-~~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~-~~~~~~~ 234 (278)
T 3sx2_A 168 ---A-DP-GSVGYVAAKHGVVGLMRVYANLLAGQM---IRVNSIHPSGVETPMINNEFTR----EWLAKMAA-ATDTPGA 234 (278)
T ss_dssp ---S-SH-HHHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESCBSSTTTSSHHHH----HHHHHHHH-HCC--CT
T ss_pred ---C-CC-CchHhHHHHHHHHHHHHHHHHHHhccC---cEEEEEecCCccCccchhhhHH----HHHhhccc-hhhhhhh
Confidence 0 01 122355444 44433332 257 9999999999999865432111 11111111 1111112
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.+... . ..+..++|+|+++++++..+ ...|++++|.+|..
T Consensus 235 ~~~~~---p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 276 (278)
T 3sx2_A 235 MGNAM---P-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL 276 (278)
T ss_dssp TSCSS---S-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred hhhhc---C-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence 22221 2 56788999999999988643 35699999998753
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=5.8e-08 Score=86.77 Aligned_cols=148 Identities=13% Similarity=0.041 Sum_probs=92.6
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|++... +++..+++|+.|+.++++++... ..+-.|||++||...+... ..
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~- 174 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN---------PG- 174 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC---------TT-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC---------CC-
Confidence 468999999985321 33457899999999999987432 0034699999998766421 00
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|.++....... ..+. ...|+
T Consensus 175 --------~~~Y~asK~a~~~l~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~--------~~~~--~~~p~--- 230 (269)
T 4dmm_A 175 --------QANYSAAKAGVIGLTKTVAKELASRG---ITVNAVAPGFIATDMTSELAA--------EKLL--EVIPL--- 230 (269)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBTTSCSCHHHH--------HHHG--GGCTT---
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHhhhC---cEEEEEEECCCcCcccccccH--------HHHH--hcCCC---
Confidence 000 12344444444444432 257 999999999998875422110 0110 11121
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCC---CCCcceeecCCCccc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPY---ARNEAFNCSNGDVFK 201 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~---a~g~~fNI~~g~~~s 201 (309)
..+..++|+|+++++++..+. ..||+++|.+|..+|
T Consensus 231 ---------~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 231 ---------GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp ---------SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred ---------CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence 245678899999999887643 349999999886543
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.3e-07 Score=83.78 Aligned_cols=154 Identities=11% Similarity=-0.002 Sum_probs=92.8
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++... .....+||++||...+...
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 153 (263)
T 3ak4_A 85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA----------- 153 (263)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-----------
Confidence 368999999984321 33457899999999999887542 1114799999998665321
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh-HHH-----HHHHHHHHhHh
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV-VGT-----LCVYAAICKHE 149 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~-~~~-----~~i~~~l~~~~ 149 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|+++........ ... -.....+. .
T Consensus 154 -~------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 221 (263)
T 3ak4_A 154 -P------LLAHYSASKFAVFGWTQALAREMAPKN---IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYV--S 221 (263)
T ss_dssp -T------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHH--H
T ss_pred -C------CchhHHHHHHHHHHHHHHHHHHHhHcC---eEEEEEecccccChhhhhhccccccccccCcHHHHHHHH--h
Confidence 0 0000 13344455555444432 247 9999999999998742111000 000 00000000 0
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.. ....+.+++|+|+++++++..+ ...|+.|||.+|..
T Consensus 222 ~~------------p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 222 LT------------PLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp TC------------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred cC------------CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence 11 1235778999999999888653 34699999998854
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.60 E-value=9.3e-08 Score=84.73 Aligned_cols=153 Identities=11% Similarity=0.034 Sum_probs=94.4
Q ss_pred CCccEEEEeecccCC--------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP--------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.++|++||+|+.... +++..+++|+.|+.++++++... ..+-.|||++||...+... .
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 155 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN----------V-- 155 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC----------T--
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC----------C--
Confidence 468999999985321 33457899999999999997421 0134799999998766421 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|.++........ .....+. ...|
T Consensus 156 ------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~----~~~~~~~--~~~p----- 215 (256)
T 3gaf_A 156 ------RMASYGSSKAAVNHLTRNIAFDVGPMG---IRVNAIAPGAIKTDALATVLTP----EIERAML--KHTP----- 215 (256)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCCHHHHHHCCH----HHHHHHH--TTCT-----
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHHhhhC---cEEEEEEEccccCchhhhccCH----HHHHHHH--hcCC-----
Confidence 0000 12344445454444432 247 9999999999988642111100 0000110 1111
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccH
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKW 202 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~ 202 (309)
...+.+++|+|+++++++... ...||++||.+|...++
T Consensus 216 -------~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 216 -------LGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp -------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred -------CCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence 234678999999999988643 34699999999987764
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.60 E-value=8.2e-08 Score=84.77 Aligned_cols=146 Identities=8% Similarity=-0.111 Sum_probs=93.7
Q ss_pred ccCCCCccEEEEeecccC------C----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 7 LSKLTDVTHIFYVTWASR------P----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~------~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.+....+|+|||+|++.. . ++++.+++|+.|+.++++++...-..-.|||++||...+...
T Consensus 82 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------- 152 (251)
T 3orf_A 82 NSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT--------- 152 (251)
T ss_dssp HTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---------
T ss_pred HHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC---------
Confidence 344567999999998421 1 234577999999999999987541111489999998766321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh----cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
. .... ..+|.+.+.+++..+.+ ..+ +.+++++|+.|.++.. +....
T Consensus 153 -~--------~~~~Y~~sKaa~~~~~~~la~e~~~~~~g---i~v~~v~PG~v~t~~~-----------------~~~~~ 203 (251)
T 3orf_A 153 -S--------GMIAYGATKAATHHIIKDLASENGGLPAG---STSLGILPVTLDTPTN-----------------RKYMS 203 (251)
T ss_dssp -T--------TBHHHHHHHHHHHHHHHHHTSTTSSSCTT---CEEEEEEESCBCCHHH-----------------HHHCT
T ss_pred -C--------CCchhHHHHHHHHHHHHHHHHHhcccCCC---cEEEEEecCcCcCcch-----------------hhhcc
Confidence 0 0000 12344455555555443 245 9999999998866421 10000
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcC---CCCCCcceeecCCCcc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD---PYARNEAFNCSNGDVF 200 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~---~~a~g~~fNI~~g~~~ 200 (309)
. . ....+..++|+|+++++++.. ....|+.++|.+|+..
T Consensus 204 ~-----~-----~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~ 245 (251)
T 3orf_A 204 D-----A-----NFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV 245 (251)
T ss_dssp T-----S-----CGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred c-----c-----cccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence 0 1 224567899999999998876 3456999999987764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.59 E-value=5.7e-08 Score=89.09 Aligned_cols=164 Identities=10% Similarity=0.028 Sum_probs=102.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCC--------CceEEEEeCCccccCCccccCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPN--------LRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~--------v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
.++|+|||+|++... +++..+++|+.|+.++++++...-.. =.|||++||...+...
T Consensus 113 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------ 186 (322)
T 3qlj_A 113 GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS------ 186 (322)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC------
Confidence 468999999985321 33457899999999999987543100 1489999998766421
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
.. ... ..+|.+.+.+.+.++.+ ..+ +.++.|+|+ |..+-.......
T Consensus 187 ---~~---------~~~Y~asKaal~~l~~~la~e~~~~g---I~vn~v~PG-~~t~~~~~~~~~--------------- 235 (322)
T 3qlj_A 187 ---VG---------QGNYSAAKAGIATLTLVGAAEMGRYG---VTVNAIAPS-ARTRMTETVFAE--------------- 235 (322)
T ss_dssp ---TT---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEEC-TTSCCSCCSCCC---------------
T ss_pred ---CC---------CccHHHHHHHHHHHHHHHHHHhcccC---cEEEEecCC-CCCccchhhhhh---------------
Confidence 00 000 12344444444444432 257 999999998 654422221110
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc-----------------cHHHHHHHHHH
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF-----------------KWKHLWKVLAE 211 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~-----------------s~~el~~~i~~ 211 (309)
.. .... ....+..++|+|+++++++... ...|+.|+|.+|... +..||.+.+.+
T Consensus 236 -~~---~~~~---~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~ 308 (322)
T 3qlj_A 236 -MM---ATQD---QDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVAD 308 (322)
T ss_dssp ---------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHH
T ss_pred -hh---hccc---cccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHH
Confidence 00 0000 1234567889999999888643 246999999988765 66899999999
Q ss_pred HhccccC
Q 045430 212 QFEIENY 218 (309)
Q Consensus 212 ~~G~~~~ 218 (309)
.+|.+.+
T Consensus 309 ~~~~~~~ 315 (322)
T 3qlj_A 309 LLGKARP 315 (322)
T ss_dssp HHHHSCC
T ss_pred HhhccCC
Confidence 9986543
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.58 E-value=2.3e-07 Score=84.09 Aligned_cols=150 Identities=14% Similarity=0.095 Sum_probs=92.6
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|++... ++++.+++|+.|+.++++++. +. +..|||++||...+...
T Consensus 117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~iV~isS~~~~~~~--------- 185 (293)
T 3rih_A 117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS--GRGRVILTSSITGPVTG--------- 185 (293)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--SSCEEEEECCSBTTTBB---------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEEeChhhccCC---------
Confidence 3468999999985321 334578999999999999983 33 45799999998653111
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
.| .... ..+|.+.+.+.+.++.+ ..+ +.++.|+|+.|+++........ ....+. ...|+
T Consensus 186 --~~------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~t~~~~~~~~~-----~~~~~~--~~~p~ 247 (293)
T 3rih_A 186 --YP------GWSHYGASKAAQLGFMRTAAIELAPRG---VTVNAILPGNILTEGLVDMGEE-----YISGMA--RSIPM 247 (293)
T ss_dssp --CT------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCCHHHHHTCHH-----HHHHHH--TTSTT
T ss_pred --CC------CCHHHHHHHHHHHHHHHHHHHHHhhhC---eEEEEEecCCCcCcchhhccHH-----HHHHHH--hcCCC
Confidence 00 0000 12344444444444432 257 9999999999999854222111 111111 12222
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.-+...+|+|+++++++..+ ...|++++|.+|...
T Consensus 248 ------------~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 248 ------------GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp ------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred ------------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 12345788999998888643 356999999988764
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.3e-07 Score=80.41 Aligned_cols=156 Identities=12% Similarity=0.048 Sum_probs=88.9
Q ss_pred CccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 12 DVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 12 ~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
++|+|||+|+.... ++++.+++|+.|+.++++++. +. +.+|||++||...|... .
T Consensus 85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~----------~ 152 (260)
T 2z1n_A 85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK--GWGRMVYIGSVTLLRPW----------Q 152 (260)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC----------T
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEECchhhcCCC----------C
Confidence 38999999984321 335578999999977666653 33 46899999998777421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|+++............ ..+.. ......
T Consensus 153 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~--~~~~~~ 216 (260)
T 2z1n_A 153 --------DLALSNIMRLPVIGVVRTLALELAPHG---VTVNAVLPSLILTDRVRSLAEERARR---SGITV--EEALKS 216 (260)
T ss_dssp --------TBHHHHHHTHHHHHHHHHHHHHHGGGT---EEEEEEEECHHHHCCCC-------------------------
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHHhhhC---eEEEEEEECCcccchhhhhhhhhhcc---cCCcH--HHHHHH
Confidence 0000 13344455554444332 247 99999999999998643110000000 00000 000000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..... ....+.+++|+|+++++++..+ ...|+.++|.+|.
T Consensus 217 ~~~~~---p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 217 MASRI---PMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp ---CC---TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHhcC---CCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 00000 1124668999999999888642 3569999998874
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.57 E-value=2.9e-07 Score=82.48 Aligned_cols=157 Identities=11% Similarity=-0.043 Sum_probs=92.9
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|++||+|++... ++++.+++|+.|+.++++++... ...-.|||++||...+... ..
T Consensus 104 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~ 174 (280)
T 3pgx_A 104 GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT---------PG 174 (280)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC---------TT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC---------CC
Confidence 468999999985321 33446789999999999997432 1113689999998766421 00
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|+++...... . ...+... ......++.
T Consensus 175 ---------~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~--~--~~~~~~~-~~~~~~~~~ 237 (280)
T 3pgx_A 175 ---------NGHYSASKHGLTALTNTLAIELGEYG---IRVNSIHPYSVETPMIEPEA--M--MEIFARH-PSFVHSFPP 237 (280)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSTTCCHHH--H--HHHHHHC-GGGGGGSCC
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCcccCcccchhh--h--hhhhhcC-chhhhhhhh
Confidence 000 12344444444444432 257 99999999999998643210 0 0011000 000011111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.... .. -+.+++|+|+++++++..+ ...||+++|.+|.
T Consensus 238 ~~~~----~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 238 MPVQ----PN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp BTTB----CS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred cccC----CC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 1111 22 3789999999999888643 3569999998775
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.57 E-value=4.4e-07 Score=79.15 Aligned_cols=142 Identities=8% Similarity=-0.069 Sum_probs=90.0
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|+.... ++++.+++|+.|+.++++++... ..+.+|||++||...|... .
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~ 153 (244)
T 2bd0_A 84 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF----------R 153 (244)
T ss_dssp TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T
T ss_pred CCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC----------C
Confidence 3468999999985321 33457899999999999997431 0146899999998777521 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+++..+.+ ..+ +.++++||+.|+|+...... .+
T Consensus 154 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~-----------------~~--- 202 (244)
T 2bd0_A 154 --------HSSIYCMSKFGQRGLVETMRLYARKCN---VRITDVQPGAVYTPMWGKVD-----------------DE--- 202 (244)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHTTTT---EEEEEEEECCBCSTTTCCCC-----------------ST---
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHhhccC---cEEEEEECCCccchhhhhcc-----------------cc---
Confidence 0000 12344455554433321 257 99999999999997532110 00
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCcc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDVF 200 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~~ 200 (309)
. ...+.+++|+|+++++++..+. ..|+++....++.+
T Consensus 203 ---~-----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 203 ---M-----QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGDI 241 (244)
T ss_dssp ---T-----GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred ---c-----cccCCCHHHHHHHHHHHHhCCccccchheEEecccccc
Confidence 0 1256789999999999887543 23666666555443
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=2.5e-08 Score=88.26 Aligned_cols=151 Identities=11% Similarity=-0.012 Sum_probs=88.6
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCC---CCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGK---IRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~---~~~~~ 78 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++......-.|||++||..+|+.. ....+ .....
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~-~~~~~~~~~~~~~ 159 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRAL-KSCSPELQQKFRS 159 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHH-HTSCHHHHHHHHC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhccc-ccCChhHHhhccc
Confidence 368999999984321 234468999999999999998652112499999998877421 00000 00001
Q ss_pred CCCCCCCC-----------------CCCcccchHHHHH-----HHHHHHHh--c----CCCcceeEEeecCCceecccCC
Q 045430 79 TPFTEDLP-----------------RLNVTNFYYTQED-----ILFEEVEK--R----KGPLSLTWSVHRPHIIFGFSPY 130 (309)
Q Consensus 79 ~p~~E~~p-----------------~~p~p~~~y~~e~-----~~~~~~~~--~----~~~~~~~~~ilRP~~VyGp~~~ 130 (309)
.+++|+++ ..+.|.+.|+.+| +++.++.+ . .+ +.+++++|+.|.++...
T Consensus 160 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~---i~v~~v~PG~v~t~~~~ 236 (276)
T 1wma_A 160 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDK---ILLNACCPGWVRTDMAG 236 (276)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSC---CEEEEEECCSBCSTTTC
T ss_pred cccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCc---eEEEEecCCccccCcCC
Confidence 23444321 0011223455444 44433332 1 36 99999999988664211
Q ss_pred CcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCC----CCCcceeecCCCccc
Q 045430 131 SMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY----ARNEAFNCSNGDVFK 201 (309)
Q Consensus 131 ~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~----a~g~~fNI~~g~~~s 201 (309)
. ..+..++++|+++++++..+. ..|+.|+ ++.+..
T Consensus 237 -------------------~---------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~--~~~~~~ 275 (276)
T 1wma_A 237 -------------------P---------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS--EKRVEQ 275 (276)
T ss_dssp -------------------T---------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE--TTEEEC
T ss_pred -------------------c---------------cccCChhHhhhhHhhhhcCcccccccCceEec--cCceec
Confidence 0 024578899999999987542 3577665 555544
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=5.7e-08 Score=87.86 Aligned_cols=152 Identities=12% Similarity=0.056 Sum_probs=94.9
Q ss_pred CCCccEEEEeecccCC----------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP----------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..++|++||+|+.... ++++.+++|+.|+.++++++...-..-.+||++||...|... ..
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------~~- 192 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN---------ET- 192 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC---------TT-
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC---------CC-
Confidence 3468999999984311 335578999999999999987652223589999999887531 00
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
... ..+|.+.+.+.+..+.+ ..+ +.+..|+|+.|+++........- .+ +..
T Consensus 193 --------~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~~-------~~-~~~------- 246 (291)
T 3ijr_A 193 --------LIDYSATKGAIVAFTRSLSQSLVQKG---IRVNGVAPGPIWTPLIPSSFDEK-------KV-SQF------- 246 (291)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCSTHHHHHSCHH-------HH-HHT-------
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHHhhcC---EEEEEEeeCCCcCCcccccCCHH-------HH-HHH-------
Confidence 000 12344445554444432 247 99999999999986421111000 00 001
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
+... ....+..++|+|+++++++..+ ...|++++|.+|..+
T Consensus 247 ~~~~---p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 247 GSNV---PMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIV 289 (291)
T ss_dssp TTTS---TTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred HccC---CCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence 1111 2245667889999999888643 356999999988654
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.56 E-value=5e-07 Score=80.69 Aligned_cols=152 Identities=5% Similarity=-0.043 Sum_probs=88.8
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... +++..+++|+.|+.++++++. +. +..|||++||...|...
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~~g~iv~isS~~~~~~~---------- 165 (273)
T 1ae1_A 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS--QNGNVIFLSSIAGFSAL---------- 165 (273)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSEEEEEECCGGGTSCC----------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEcCHhhcCCC----------
Confidence 578999999985321 234467899999999999884 22 45799999998777521
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH-HHHHHHHHHhHhCCce
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG-TLCVYAAICKHEGVPL 153 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~-~~~i~~~l~~~~g~~~ 153 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|+++.......... .-.....+.+ ..|+
T Consensus 166 ~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~p~ 232 (273)
T 1ae1_A 166 P--------SVSLYSASKGAINQMTKSLACEWAKDN---IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV--KTPM 232 (273)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBC-------------CHHHHHHHHH--HSTT
T ss_pred C--------CcchhHHHHHHHHHHHHHHHHHHhhcC---cEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHh--cCCC
Confidence 0 0000 12344445444444332 247 999999999999985422111000 0000011111 1111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..+..++|+|+++++++..+ ...|++++|.+|..
T Consensus 233 ------------~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 233 ------------GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp ------------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ------------CCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 23567899999998888643 34699999998854
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.55 E-value=2.5e-07 Score=81.94 Aligned_cols=159 Identities=11% Similarity=0.049 Sum_probs=96.6
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
..++|+++|+|++... ++++.+++|+.|+.++++++...-..-.|||++||...+... +
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 147 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH----------P-- 147 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC----------T--
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC----------C--
Confidence 3468999999985322 334578999999999999987641112489999998776521 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCCceeec
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+.... ...... ...+..... ...|
T Consensus 148 ------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~-~~~p---- 212 (255)
T 4eso_A 148 ------GMSVYSASKAALVSFASVLAAELLPRG---IRVNSVSPGFIDTPTKGVAGITEAE-RAEFKTLGD-NITP---- 212 (255)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHTGGGT---CEEEEEEECSBCCSSTTCTTSCHHH-HHHHHHHHH-HHST----
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHHhhhC---cEEEEEecCcccCcccccccCChhh-HHHHHHHHh-ccCC----
Confidence 0000 02344444444444432 246 999999999999985421 111110 011111101 0112
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcC-CCCCCcceeecCCCcccHH
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVD-PYARNEAFNCSNGDVFKWK 203 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~-~~a~g~~fNI~~g~~~s~~ 203 (309)
...+..++|+|+++++++.. ....|++++|.+|...++.
T Consensus 213 --------~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~ 252 (255)
T 4eso_A 213 --------MKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS 252 (255)
T ss_dssp --------TSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred --------CCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence 12455789999999888764 3356999999998776543
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=3.3e-07 Score=80.94 Aligned_cols=147 Identities=8% Similarity=-0.033 Sum_probs=88.6
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHH----HHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNV----LRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nl----l~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... ++++.+++|+.|+.++ +..+++. +..|||++||...|...
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~---------- 145 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA--GGGSIVNISSAAGLMGL---------- 145 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEECchhhccCC----------
Confidence 368999999985321 3345789999999754 4445544 46899999998766421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+++.... +.......
T Consensus 146 ~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~-------------~~~~~~~~-- 199 (254)
T 1hdc_A 146 A--------LTSSYGASKWGVRGLSKLAAVELGTDR---IRVNSVHPGMTYTPMTAE-------------TGIRQGEG-- 199 (254)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHH-------------HTCCCSTT--
T ss_pred C--------CchhHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEecccCcCccccc-------------cchhHHHH--
Confidence 0 0000 12344445444444332 247 999999999998863210 00000000
Q ss_pred ecCCccccccceecc-CHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 155 FPGSKDCWEGYSVAS-DADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~-~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+... . ....+. +++|+|+++++++..+ ...|+.++|.+|..
T Consensus 200 ~~~~-~---p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 200 NYPN-T---PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp SCTT-S---TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHhc-C---CCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 0000 0 112356 8999999999888643 34699999998854
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.4e-07 Score=83.51 Aligned_cols=153 Identities=10% Similarity=0.006 Sum_probs=91.6
Q ss_pred CCCccEEEEeecccC----------C---ChHHHHHhHHHHHHHHHHHhCcCC----------CCCceEEEEeCCccccC
Q 045430 10 LTDVTHIFYVTWASR----------P---TEAENCEVNGAMLRNVLRSVIPNA----------PNLRHVCLQTGGKHYVG 66 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~----------~---~~~~~~~vNv~gt~nll~a~~~~~----------~~v~r~v~~Ss~~vYG~ 66 (309)
..++|++||+|++.. . ++++.+++|+.|+.++++++...- .+-.|||++||...+..
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (257)
T 3tl3_A 77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG 156 (257)
T ss_dssp HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC
T ss_pred hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC
Confidence 347999999998421 1 345678999999999999875420 12358999999866632
Q ss_pred CccccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHH
Q 045430 67 PFESFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYA 143 (309)
Q Consensus 67 ~~~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~ 143 (309)
. . .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+-........ ..
T Consensus 157 ~----------~--------~~~~Y~asKaa~~~~~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~-----~~ 210 (257)
T 3tl3_A 157 Q----------I--------GQAAYSASKGGVVGMTLPIARDLASHR---IRVMTIAPGLFDTPLLASLPEEA-----RA 210 (257)
T ss_dssp H----------H--------HHHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCTTC---CHHH-----HH
T ss_pred C----------C--------CCccHHHHHHHHHHHHHHHHHHhcccC---cEEEEEEecCccChhhhhccHHH-----HH
Confidence 1 0 0000 02333344444443332 247 99999999999887543322111 01
Q ss_pred HHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCccc
Q 045430 144 AICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFK 201 (309)
Q Consensus 144 ~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s 201 (309)
.+. ...|+ + ..+..++|+|+++++++..+...|++++|.+|..++
T Consensus 211 ~~~--~~~~~--~---------~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 211 SLG--KQVPH--P---------SRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp HHH--HTSSS--S---------CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred HHH--hcCCC--C---------CCccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence 111 12221 1 235678999999999988766789999999887654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.54 E-value=2e-07 Score=82.81 Aligned_cols=151 Identities=13% Similarity=0.051 Sum_probs=92.8
Q ss_pred CCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|++||+|++... + +++.+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~ 155 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG-----------Y 155 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC-----------C
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-----------C
Confidence 468999999985321 2 3446899999999999887653 0135799999997543110 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|+++........ ....+. ...|+
T Consensus 156 ~------~~~~Y~asK~a~~~l~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~-----~~~~~~--~~~p~--- 216 (262)
T 3pk0_A 156 P------GWSHYGATKAAQLGFMRTAAIELAPHK---ITVNAIMPGNIMTEGLLENGEE-----YIASMA--RSIPA--- 216 (262)
T ss_dssp T------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCCHHHHTTCHH-----HHHHHH--TTSTT---
T ss_pred C------CChhhHHHHHHHHHHHHHHHHHHHhhC---cEEEEEEeCcCcCccccccCHH-----HHHHHH--hcCCC---
Confidence 0 0000 12344455555544432 247 9999999999999853221111 111111 11221
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.-+..++|+|+++++++..+ ...||+++|.+|...
T Consensus 217 ---------~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 217 ---------GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp ---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred ---------CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 13457899999999888643 356999999988764
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.9e-07 Score=80.79 Aligned_cols=149 Identities=9% Similarity=-0.051 Sum_probs=88.8
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..+|+|||+|++... ++++.+++|+.|+.++++++... ..+-.+||++||...+... .
T Consensus 100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~ 169 (266)
T 3o38_A 100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ----------H 169 (266)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC----------T
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC----------C
Confidence 468999999985321 23457899999999999987643 1134689999998665321 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+++.++.+ ..+ +.++.++|+.|..+-....... .....
T Consensus 170 --------~~~~Y~~sKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~---------------~~~~~ 223 (266)
T 3o38_A 170 --------SQSHYAAAKAGVMALTRCSAIEAVEFG---VRINAVSPSIARHKFLEKTSSS---------------ELLDR 223 (266)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCCCC-----------------------------
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHHHcC---cEEEEEeCCcccchhhhccCcH---------------HHHHH
Confidence 0000 12344444444444332 257 9999999999987643211100 00000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..... ....+..++|+|+++++++..+ ...||+++|.+|.
T Consensus 224 ~~~~~---~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 224 LASDE---AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp ---CC---TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred HHhcC---CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence 11111 2345678999999999988643 3569999999874
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.53 E-value=3e-07 Score=81.39 Aligned_cols=154 Identities=6% Similarity=-0.086 Sum_probs=92.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|++||+|+.... +++..+++|+.|+.++++++... ..+-.|||++||...+... .
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 151 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG----------P 151 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC----------T
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC----------C
Confidence 468999999984221 33457899999999999998321 0135789999998666421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh---cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK---RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~---~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|+++.......... .....+. ...
T Consensus 152 --------~~~~Y~asKaa~~~l~~~la~e~~~~~g---Irvn~v~PG~v~t~~~~~~~~~~~--~~~~~~~--~~~--- 213 (257)
T 3imf_A 152 --------GVIHSAAAKAGVLAMTKTLAVEWGRKYG---IRVNAIAPGPIERTGGADKLWISE--EMAKRTI--QSV--- 213 (257)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCBSSCCCC---------CCSHHHH--TTS---
T ss_pred --------CcHHHHHHHHHHHHHHHHHHHHhccccC---eEEEEEEECCCcCCcchhhcccCH--HHHHHHH--hcC---
Confidence 0000 12344444444443321 247 999999999999885432110000 0000000 011
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
....+..++|+|+++++++..+ ...|+.++|.+|...+
T Consensus 214 ---------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 214 ---------PLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp ---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred ---------CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence 1234668999999999888643 3469999999987653
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=5.1e-07 Score=79.87 Aligned_cols=156 Identities=8% Similarity=0.009 Sum_probs=90.0
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|++... +++..+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 150 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS----------A- 150 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC----------C-
Confidence 468999999985321 33457899999999998887432 0135899999998766421 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC---c-
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV---P- 152 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~---~- 152 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|.++......... .+..+. .
T Consensus 151 -------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~---------~~~~~~~~~~~ 211 (260)
T 1x1t_A 151 -------NKSAYVAAKHGVVGFTKVTALETAGQG---ITANAICPGWVRTPLVEKQISAL---------AEKNGVDQETA 211 (260)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHTTTT---EEEEEEEECCBCC------------------------------
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhccCC---EEEEEEeecCccCchHHHhhhhh---------ccccCCchHHH
Confidence 0000 12344445555444432 246 99999999999987542211100 000000 0
Q ss_pred e-eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 L-LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~-~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
. .+.... .....+.+++|+|+++++++..+ ...|+.|+|.+|..
T Consensus 212 ~~~~~~~~---~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~ 258 (260)
T 1x1t_A 212 ARELLSEK---QPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258 (260)
T ss_dssp ---CHHHH---CTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHhhcc---CCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence 0 000000 01235778999999999988643 34699999998753
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.52 E-value=3.4e-07 Score=81.55 Aligned_cols=152 Identities=9% Similarity=-0.010 Sum_probs=91.9
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|++... +++..+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 170 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA----------F- 170 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T-
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC----------C-
Confidence 468999999985321 33457899999999999987531 0134799999998666421 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+........ . ....+ .
T Consensus 171 -------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~~---------~---~~~~~-~- 226 (269)
T 3gk3_A 171 -------GQANYASAKAGIHGFTKTLALETAKRG---ITVNTVSPGYLATAMVEAVPQD---------V---LEAKI-L- 226 (269)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCTTTTC-------------------CCS-G-
T ss_pred -------CcchHHHHHHHHHHHHHHHHHHhhhcC---CEEEEEecCcccchhhhhhchh---------H---HHHHh-h-
Confidence 0000 02233334344433332 247 9999999999987654322110 0 00000 0
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCccc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDVFK 201 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~~s 201 (309)
... ....+..++|+|+++++++..+. ..|+++||.+|..+|
T Consensus 227 -~~~---~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 227 -PQI---PVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp -GGC---TTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred -hcC---CcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence 000 22456689999999998886542 569999999987654
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.2e-07 Score=82.07 Aligned_cols=155 Identities=9% Similarity=-0.120 Sum_probs=85.4
Q ss_pred CCccEEEEeecccC-C------C---hHHHHHhHHHHHHHHHHHhCcCC------CCCceEEEEeCCccccCCccccCCC
Q 045430 11 TDVTHIFYVTWASR-P------T---EAENCEVNGAMLRNVLRSVIPNA------PNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-~------~---~~~~~~vNv~gt~nll~a~~~~~------~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
.++|+|||+|+... . + ++..+++|+.|+.++++++...- ..-.+||++||...+...
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------- 154 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR------- 154 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC-------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC-------
Confidence 46899999998532 1 2 24467999999999988875431 012469999998665321
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|.++.....+.... . .
T Consensus 155 ---~--------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~---------~---~ 208 (261)
T 3n74_A 155 ---P--------NLAWYNATKGWVVSVTKALAIELAPAK---IRVVALNPVAGETPLLTTFMGEDS---------E---E 208 (261)
T ss_dssp ---T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEEC-----------------------------
T ss_pred ---C--------CccHHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEecCcccChhhhhhcccCc---------H---H
Confidence 0 0000 12344444444444432 247 999999999998875432221000 0 0
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
......... ....+.+++|+|+++++++..+ ...|++++|.+|..++
T Consensus 209 ~~~~~~~~~---~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~ 257 (261)
T 3n74_A 209 IRKKFRDSI---PMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIG 257 (261)
T ss_dssp --------C---TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC-
T ss_pred HHHHHhhcC---CcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccC
Confidence 000011111 2346788999999999888532 3569999999998764
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.52 E-value=2.6e-07 Score=81.87 Aligned_cols=158 Identities=7% Similarity=-0.040 Sum_probs=94.3
Q ss_pred CCCccEEEEeecccC-----------C---ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 10 LTDVTHIFYVTWASR-----------P---TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----------~---~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
..++|+|||+|++.. . +++..+++|+.|+.++++++...-..-.+||++||...+...
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------- 161 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI-------- 161 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC--------
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC--------
Confidence 357899999998431 1 234478999999999999987641112489999998766421
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
.. ... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+........-. ....+.+ ..|
T Consensus 162 -~~---------~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~~ 223 (271)
T 3ek2_A 162 -PN---------YNTMGLAKAALEASVRYLAVSLGAKG---VRVNAISAGPIKTLAASGIKSFGK---ILDFVES--NSP 223 (271)
T ss_dssp -TT---------TTHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCC-----CCCHHHHH---HHHHHHH--HST
T ss_pred -CC---------ccchhHHHHHHHHHHHHHHHHHHhcC---cEEEEEecCcccchhhhcccchHH---HHHHHHh--cCC
Confidence 00 000 12344444444433322 247 999999999998875433211111 1111111 112
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcccHHHH
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVFKWKHL 205 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~s~~el 205 (309)
+ ..+..++|+|+++++++.. ....|++++|.+|...+..++
T Consensus 224 ~------------~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~ 266 (271)
T 3ek2_A 224 L------------KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGM 266 (271)
T ss_dssp T------------SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC
T ss_pred c------------CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhh
Confidence 1 2345789999999998864 345699999999988776554
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.5e-07 Score=85.01 Aligned_cols=96 Identities=15% Similarity=0.083 Sum_probs=61.6
Q ss_pred CCccEEEEeecccC--C-------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASR--P-------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~--~-------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|++.. + ++++.+++|+.|+.++++++ ++. +..+||++||...++..
T Consensus 86 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~--~~g~iV~isS~~~~~~~---------- 153 (324)
T 3u9l_A 86 GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ--KHGLLIWISSSSSAGGT---------- 153 (324)
T ss_dssp SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEEecchhccCC----------
Confidence 47899999998421 1 23446799999999999998 444 46899999998777421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceeccc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFS 128 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~ 128 (309)
.|. ... ..+|.+.|.+.+.++.+ ..+ +.+++|+|+.|.++.
T Consensus 154 -~~~------~~~Y~asKaa~~~~~~~la~el~~~g---I~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 154 -PPY------LAPYFAAKAAMDAIAVQYARELSRWG---IETSIIVPGAFTSGT 197 (324)
T ss_dssp -CSS------CHHHHHHHHHHHHHHHHHHHHHHTTT---EEEEEEEECCC----
T ss_pred -CCc------chhHHHHHHHHHHHHHHHHHHhhhhC---cEEEEEECCccccCc
Confidence 000 000 12344455454444432 257 999999999998764
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.5e-07 Score=84.40 Aligned_cols=154 Identities=12% Similarity=-0.001 Sum_probs=91.6
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|++... +++..+++|+.|+.++++++. +. +-.|||++||...+...
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~---------- 167 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN--GGGSIINTTSYTATSAI---------- 167 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECCGGGTSCC----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEECchhhCcCC----------
Confidence 468999999985321 234467899999998888873 33 35799999998776421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh-HHHHHHHHHHHhHhCCce
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV-VGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~-~~~~~i~~~l~~~~g~~~ 153 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+........ .........+ ....
T Consensus 168 ~--------~~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~-- 232 (277)
T 4dqx_A 168 A--------DRTAYVASKGAISSLTRAMAMDHAKEG---IRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDF--NARA-- 232 (277)
T ss_dssp T--------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHH--HTTS--
T ss_pred C--------CChhHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCcCcCchhhhhcccccchhHHHHHH--HhcC--
Confidence 0 0000 12344444444444432 247 9999999999987631000000 0000000000 0011
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
....+..++|+|+++++++..+ ...|++++|.+|...+
T Consensus 233 ----------~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 233 ----------VMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp ----------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred ----------cccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence 2234668999999999888643 2469999999987654
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.51 E-value=2.9e-07 Score=80.49 Aligned_cols=154 Identities=10% Similarity=0.032 Sum_probs=92.4
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|+|||+|+.... ++++.+++|+.|+.++++++... ..+.+|||++||...|...
T Consensus 67 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 136 (239)
T 2ekp_A 67 ALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG---------- 136 (239)
T ss_dssp HHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC----------
Confidence 34578999999984321 33457899999999998887421 0146899999999877531
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .+..+. ..+|.+.+.+.+.++.+ ..+ +.++++||+.|+++........ -..+..+. ...|
T Consensus 137 ~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~--~~~p-- 200 (239)
T 2ekp_A 137 G------PVPIPAYTTAKTALLGLTRALAKEWARLG---IRVNLLCPGYVETEFTLPLRQN---PELYEPIT--ARIP-- 200 (239)
T ss_dssp T------TSCCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSGGGHHHHTC---HHHHHHHH--TTCT--
T ss_pred C------CCCCccHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEEeCCccCchhhccccC---HHHHHHHH--hcCC--
Confidence 1 010000 12344445554444432 247 9999999999988642111000 00111111 0111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+...+|+|+++++++..+ ...|+.++|.+|.
T Consensus 201 ----------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 201 ----------MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp ----------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred ----------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence 123567899999999888643 3469999998874
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.7e-07 Score=83.79 Aligned_cols=151 Identities=11% Similarity=0.025 Sum_probs=92.1
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|++... +++..+++|+.|+.++++++...- .+-.|||++||...+... .
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 172 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN----------P- 172 (270)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC----------C-
Confidence 468999999985321 334578999999999999875320 023689999998766421 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+++++|+.|..+........ ....+. ...|
T Consensus 173 -------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~-----~~~~~~--~~~p---- 231 (270)
T 3ftp_A 173 -------GQVNYAAAKAGVAGMTRALAREIGSRG---ITVNCVAPGFIDTDMTKGLPQE-----QQTALK--TQIP---- 231 (270)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSHHHHHSCHH-----HHHHHH--TTCT----
T ss_pred -------CchhHHHHHHHHHHHHHHHHHHHhhhC---eEEEEEEeCCCcCcchhhcCHH-----HHHHHH--hcCC----
Confidence 0000 12344444444444332 247 9999999999987632111110 000110 1111
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
...+.+++|+|+++++++..+ ...|+++||.+|..+|
T Consensus 232 --------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 232 --------LGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFMS 270 (270)
T ss_dssp --------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSCC
T ss_pred --------CCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCcccC
Confidence 234668999999999888532 3569999999887553
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=3.6e-07 Score=80.63 Aligned_cols=151 Identities=14% Similarity=0.016 Sum_probs=91.2
Q ss_pred CCccEEEEeecccC------------C---ChHHHHHhHHHHHHHHHHHhCcC---C-----CCCceEEEEeCCccccCC
Q 045430 11 TDVTHIFYVTWASR------------P---TEAENCEVNGAMLRNVLRSVIPN---A-----PNLRHVCLQTGGKHYVGP 67 (309)
Q Consensus 11 ~~vd~V~H~A~~~~------------~---~~~~~~~vNv~gt~nll~a~~~~---~-----~~v~r~v~~Ss~~vYG~~ 67 (309)
.++|+|||+|+... . ++++.+++|+.++.++++++... . .+..|||++||...+...
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 164 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 164 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence 36899999998431 1 23457899999999999987643 0 035789999998777421
Q ss_pred ccccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHH
Q 045430 68 FESFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAA 144 (309)
Q Consensus 68 ~~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~ 144 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.+++++|+.|.++........ ....
T Consensus 165 ----------~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~-----~~~~ 218 (265)
T 2o23_A 165 ----------V--------GQAAYSASKGGIVGMTLPIARDLAPIG---IRVMTIAPGLFGTPLLTSLPEK-----VCNF 218 (265)
T ss_dssp ----------T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCCC---------------CH
T ss_pred ----------C--------CCchhHHHHHHHHHHHHHHHHHHhhcC---cEEEEEEeccccCccccccCHH-----HHHH
Confidence 0 0000 02333344444433332 247 9999999999988643221100 0001
Q ss_pred HHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcc
Q 045430 145 ICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVF 200 (309)
Q Consensus 145 l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~ 200 (309)
+. ...| ++ ..+.+++|+|+++++++..+...|+.++|.+|...
T Consensus 219 ~~--~~~~--~~---------~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 219 LA--SQVP--FP---------SRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp HH--HTCS--SS---------CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred HH--HcCC--Cc---------CCCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence 11 1112 11 13567899999999888766677999999988643
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.7e-07 Score=84.18 Aligned_cols=151 Identities=9% Similarity=-0.087 Sum_probs=83.8
Q ss_pred CCccEEEEeeccc--CC---------ChHHHHHhHHHHHHHHHHHhCcCC-----CCCceEEEEeCCccccCCccccCCC
Q 045430 11 TDVTHIFYVTWAS--RP---------TEAENCEVNGAMLRNVLRSVIPNA-----PNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 11 ~~vd~V~H~A~~~--~~---------~~~~~~~vNv~gt~nll~a~~~~~-----~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
.++|+|||+|++. .. ++++.+++|+.|+.++++++...- .+-.+||++||...+...
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------- 178 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS------- 178 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-------
Confidence 4689999999862 11 334567899999999988875431 113589999998666321
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
.. ... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+......... . .
T Consensus 179 --~~---------~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~------~---~---- 231 (280)
T 4da9_A 179 --PE---------RLDYCMSKAGLAAFSQGLALRLAETG---IAVFEVRPGIIRSDMTAAVSGKY------D---G---- 231 (280)
T ss_dssp ---C---------CHHHHHHHHHHHHHHHHHHHHHTTTT---EEEEEEEECCBCC-------------------------
T ss_pred --CC---------ccHHHHHHHHHHHHHHHHHHHHHHhC---cEEEEEeecCCcCCchhhcchhH------H---H----
Confidence 00 000 12344455454444432 256 99999999999887532221100 0 0
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCcc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDVF 200 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~~ 200 (309)
. +.... .....+..++|+|+++++++..+. ..||+++|.+|...
T Consensus 232 ~--~~~~~---~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 232 L--IESGL---VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp ---------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred H--HhhcC---CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence 0 00000 022356689999999998886543 46999999988643
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.49 E-value=2e-07 Score=83.83 Aligned_cols=156 Identities=9% Similarity=-0.029 Sum_probs=94.2
Q ss_pred CCccEEEEeeccc-C--C-------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-R--P-------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~--~-------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|++||+|++. . + +++..+++|+.|+.++++++...- .+-.+||++||...|...
T Consensus 84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 152 (280)
T 3tox_A 84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG----------- 152 (280)
T ss_dssp SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC-----------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC-----------
Confidence 4689999999843 1 1 334578999999999999875320 024699999998776321
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
. +.... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|.++.....+..... .....+. ...|
T Consensus 153 ~------~~~~~Y~asKaa~~~l~~~la~e~~~~g---Irvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~--~~~p--- 217 (280)
T 3tox_A 153 F------AGVAPYAASKAGLIGLVQALAVELGARG---IRVNALLPGGTDTPANFANLPGAAP-ETRGFVE--GLHA--- 217 (280)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHHHTTT---EEEEEEEECSBSSTTSGGGSTTCCT-HHHHHHH--TTST---
T ss_pred C------CCchhHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEEECCCCCchhhhhccccCH-HHHHHHh--ccCc---
Confidence 0 00000 12344444444444332 247 9999999999999754221100000 0000110 1111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
...+..++|+|+++++++..+ ...|++++|.+|...+
T Consensus 218 ---------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 256 (280)
T 3tox_A 218 ---------LKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVT 256 (280)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred ---------cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccc
Confidence 234668999999999988653 3569999999987654
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.48 E-value=2.1e-07 Score=81.60 Aligned_cols=158 Identities=9% Similarity=-0.004 Sum_probs=92.6
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
.++|++||+|++... ++++.+++|+.|+.++++++...-..-.+||++||...+... .
T Consensus 69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~--- 135 (244)
T 4e4y_A 69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK----------P--- 135 (244)
T ss_dssp CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC----------T---
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC----------C---
Confidence 479999999985321 334578999999999999987641111489999998766421 0
Q ss_pred CCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHH-HH-HHHHHHhHhCCceeec
Q 045430 82 TEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGT-LC-VYAAICKHEGVPLLFP 156 (309)
Q Consensus 82 ~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~-~~-i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|.++...+....... .. .+....+......
T Consensus 136 -----~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 204 (244)
T 4e4y_A 136 -----NSFAYTLSKGAIAQMTKSLALDLAKYQ---IRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEF--- 204 (244)
T ss_dssp -----TBHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTS---
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHHHcC---eEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcC---
Confidence 0000 12344445454444432 257 9999999999987642211100000 00 0000000000011
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
....+..++|+|+++++++..+ ...|+.++|.+|..
T Consensus 205 -------p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 205 -------PLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp -------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -------CCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence 1234678999999999988643 34699999988754
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.48 E-value=3.6e-07 Score=80.61 Aligned_cols=151 Identities=8% Similarity=-0.015 Sum_probs=87.6
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHH----HhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLR----SVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~----a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..+|+|||+|+.... ++++.+++|+.|+.++.+ .+++. + .|||++||...|...
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~-g~iv~isS~~~~~~~---------- 145 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--G-GSIINMASVSSWLPI---------- 145 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--C-EEEEEECCGGGTSCC----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc--C-CEEEEEcchhhcCCC----------
Confidence 468999999985321 234567999887665554 55554 5 899999998776421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cC--CCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RK--GPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~--~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. .... ..+|.+.+.+.+..+.+ .. + +.++++||+.|+++......... ..... ....
T Consensus 146 ~--------~~~~Y~~sK~a~~~~~~~la~e~~~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~--~~~~- 207 (253)
T 1hxh_A 146 E--------QYAGYSASKAAVSALTRAAALSCRKQGYA---IRVNSIHPDGIYTPMMQASLPKG----VSKEM--VLHD- 207 (253)
T ss_dssp T--------TBHHHHHHHHHHHHHHHHHHHHHHHHTCC---EEEEEEEESEECCHHHHHHSCTT----CCHHH--HBCB-
T ss_pred C--------CCccHHHHHHHHHHHHHHHHHHhhhcCCC---eEEEEEEeCCccCchhhhccchh----hhHHH--Hhhh-
Confidence 0 0000 12344445444444332 13 7 99999999999997421100000 00000 0000
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
... . ....+..++|+|+++++++..+ ...|+.++|.+|..
T Consensus 208 ---~~~-~---p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 249 (253)
T 1hxh_A 208 ---PKL-N---RAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSIL 249 (253)
T ss_dssp ---TTT-B---TTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred ---hcc-C---ccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCcc
Confidence 000 0 1234678999999999988653 34599999988753
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.48 E-value=8.8e-07 Score=78.19 Aligned_cols=152 Identities=6% Similarity=-0.076 Sum_probs=91.4
Q ss_pred CCccEEEEeeccc-C--C-------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWAS-R--P-------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~--~-------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..+|++||+|+.. . + +++..+++|+.|+.++++++ ++. + .+||++||...+...
T Consensus 77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~-g~iv~isS~~~~~~~--------- 144 (254)
T 3kzv_A 77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--N-GNVVFVSSDACNMYF--------- 144 (254)
T ss_dssp SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEECCSCCCCSS---------
T ss_pred CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--C-CeEEEEcCchhccCC---------
Confidence 4689999999852 2 1 23447899999999999998 443 3 699999998666421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhH----HHHHHHHHHHhHhCC
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVV----GTLCVYAAICKHEGV 151 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~----~~~~i~~~l~~~~g~ 151 (309)
. .... ..+|.+.+.+.+..+.+..+ +.+..++|+.|..+-..+..... ..-.....+.+ ..
T Consensus 145 -~--------~~~~Y~asK~a~~~~~~~la~e~~~---i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 210 (254)
T 3kzv_A 145 -S--------SWGAYGSSKAALNHFAMTLANEERQ---VKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG--LK 210 (254)
T ss_dssp -C--------CSHHHHHHHHHHHHHHHHHHHHCTT---SEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHH--HH
T ss_pred -C--------CcchHHHHHHHHHHHHHHHHhhccC---cEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHH--HH
Confidence 0 0000 13345555556655554346 99999999999987543221100 00000001101 00
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCC---CCCcceeecCCCcc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY---ARNEAFNCSNGDVF 200 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~---a~g~~fNI~~g~~~ 200 (309)
....+..++|+|+++++++..+. ..|+.+++.+++..
T Consensus 211 ------------~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~~ 250 (254)
T 3kzv_A 211 ------------ENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPALA 250 (254)
T ss_dssp ------------TTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred ------------hcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence 11345678899999998886542 56999999877654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=5.8e-07 Score=79.08 Aligned_cols=148 Identities=8% Similarity=0.011 Sum_probs=86.8
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|+.... ++++.+++|+.|+.+++++ +++. +..|||++||...|...
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~--------- 148 (249)
T 2ew8_A 80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN--GWGRIINLTSTTYWLKI--------- 148 (249)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGGSCC---------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCeEEEEEcchhhccCC---------
Confidence 3468999999985321 2345789999998888887 4443 46899999998777421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHHHhHhCCc
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|.++... ..... +....+ .
T Consensus 149 -~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~----~ 206 (249)
T 2ew8_A 149 -E--------AYTHYISTKAANIGFTRALASDLGKDG---ITVNAIAPSLVRTATTEASALSA------MFDVLP----N 206 (249)
T ss_dssp -S--------SCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCC----------------------------C
T ss_pred -C--------CchhHHHHHHHHHHHHHHHHHHHHhcC---cEEEEEecCcCcCccchhccccc------hhhHHH----H
Confidence 0 0000 12344455555444432 247 99999999999887432 11000 000000 0
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
+.. ....+.+++|+|+++++++..+ ...|+.++|.+|.
T Consensus 207 ~~~--------~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 207 MLQ--------AIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp TTS--------SSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred hhC--------ccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence 000 1234678999999999888643 3569999998875
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.47 E-value=4.3e-07 Score=79.60 Aligned_cols=144 Identities=13% Similarity=0.084 Sum_probs=78.5
Q ss_pred hccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCC
Q 045430 6 KLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 6 ~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
.++...++|+|||+|+.... +++..+++|+.|+.++++++... ..+ .+||++||...|+..
T Consensus 69 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~------- 140 (245)
T 3e9n_A 69 KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPH------- 140 (245)
T ss_dssp GGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------
T ss_pred HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCC-------
Confidence 44556689999999985322 23456899999988888776432 002 689999998777531
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
.. ... ..+|.+.+.+.+.++.+ ..+ +.+++++|+.|.++....... ..+.
T Consensus 141 --~~---------~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~-------------~~~~ 193 (245)
T 3e9n_A 141 --PG---------NTIYAASKHALRGLADAFRKEEANNG---IRVSTVSPGPTNTPMLQGLMD-------------SQGT 193 (245)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCC---------------------------
T ss_pred --CC---------chHHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEecCCccCchhhhhhh-------------hhhc
Confidence 00 000 13344455555544432 257 999999999998864322110 0011
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeec
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCS 195 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~ 195 (309)
.+ ....+..++|+|+++++++..+ ..+++|||.
T Consensus 194 ~~----------~~~~~~~p~dvA~~i~~l~~~~-~~~~~~~i~ 226 (245)
T 3e9n_A 194 NF----------RPEIYIEPKEIANAIRFVIDAG-ETTQITNVD 226 (245)
T ss_dssp ------------CCGGGSCHHHHHHHHHHHHTSC-TTEEEEEEE
T ss_pred cc----------ccccCCCHHHHHHHHHHHHcCC-CccceeeeE
Confidence 11 1234678999999999988765 457899987
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.47 E-value=4e-07 Score=80.16 Aligned_cols=150 Identities=14% Similarity=0.115 Sum_probs=91.8
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
...++|+|||+|++... ++++.+++|+.|+.++++++ ++. +..|||++||...+...
T Consensus 88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS~~~~~~~-------- 157 (256)
T 3ezl_A 88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER--GWGRIINISSVNGQKGQ-------- 157 (256)
T ss_dssp HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCCCGGGSC--------
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEEcchhhccCC--------
Confidence 34478999999985321 33457899999988887776 333 45799999998666421
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+......... ...+.+ ..|
T Consensus 158 --~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~-----~~~~~~--~~~ 217 (256)
T 3ezl_A 158 --F--------GQTNYSTAKAGIHGFTMSLAQEVATKG---VTVNTVSPGYIGTDMVKAIRPDV-----LEKIVA--TIP 217 (256)
T ss_dssp --S--------CCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHTSCHHH-----HHHHHH--HST
T ss_pred --C--------CCcccHHHHHHHHHHHHHHHHHHHHhC---CEEEEEEECcccCccccccCHHH-----HHHHHh--cCC
Confidence 0 0000 12344444444443332 247 99999999999886432221111 111111 112
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
+ ..+..++|+|+++++++..+ ...|++++|.+|..+
T Consensus 218 ~------------~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 218 V------------RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp T------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred C------------CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 1 23557899999999888542 356999999988654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.47 E-value=3e-07 Score=83.36 Aligned_cols=164 Identities=6% Similarity=-0.080 Sum_probs=95.5
Q ss_pred CCccEEEEeecccCC-----------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP-----------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++... ..+ .|||++||...+..
T Consensus 105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~----------- 172 (297)
T 1xhl_A 105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ----------- 172 (297)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS-----------
T ss_pred CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccC-----------
Confidence 468999999984321 23457899999999999987653 113 69999999876642
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcc-hhHHHHHHHHHHHhHhCCce
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMM-NVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~-~~~~~~~i~~~l~~~~g~~~ 153 (309)
.. +..+. ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|.++...... ....... .....+......
T Consensus 173 ~~------~~~~~Y~asKaa~~~l~~~la~el~~~g---I~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 242 (297)
T 1xhl_A 173 AH------SGYPYYACAKAALDQYTRCTAIDLIQHG---VRVNSVSPGAVATGFMGAMGLPETASDK-LYSFIGSRKECI 242 (297)
T ss_dssp CC------TTSHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBCSSHHHHTTCCHHHHHH-HHHHHHHCTTTC
T ss_pred CC------CCcchHHHHHHHHHHHHHHHHHHhcccC---eEEEEEeeCCCcCccccccccccccccc-hHHHHHHHHhcC
Confidence 10 10000 12344444444443321 257 99999999999886421110 0000000 000101111111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC---CCCCcceeecCCCcccHHHHH
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP---YARNEAFNCSNGDVFKWKHLW 206 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~~g~~~s~~el~ 206 (309)
+ ...+..++|+|+++++++..+ ...|+.++|.+|......+..
T Consensus 243 p----------~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~ 288 (297)
T 1xhl_A 243 P----------VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQT 288 (297)
T ss_dssp T----------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGG
T ss_pred C----------CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccc
Confidence 1 124678999999999888643 356999999998766544433
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.47 E-value=2.6e-07 Score=82.38 Aligned_cols=146 Identities=13% Similarity=0.057 Sum_probs=85.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|++... ++++.+++|+.|+.++.+++ ++. +..|||++||...+...
T Consensus 100 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~Iv~isS~~~~~~~---------- 167 (266)
T 3grp_A 100 EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR--RYGRIINITSIVGVVGN---------- 167 (266)
T ss_dssp TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCC----------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCcEEEEECCHHHcCCC----------
Confidence 468999999985321 34557899999966666554 333 35799999998655321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|.++......... ...+. ...|
T Consensus 168 ~--------~~~~Y~asKaa~~~~~~~la~e~~~~g---I~vn~v~PG~v~t~~~~~~~~~~-----~~~~~--~~~p-- 227 (266)
T 3grp_A 168 P--------GQTNYCAAKAGLIGFSKALAQEIASRN---ITVNCIAPGFIKSAMTDKLNEKQ-----KEAIM--AMIP-- 227 (266)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSHHHHTCCHHH-----HHHHH--TTCT--
T ss_pred C--------CchhHHHHHHHHHHHHHHHHHHhhhhC---cEEEEEeeCcCCCchhhccCHHH-----HHHHH--hcCC--
Confidence 0 0000 02334444444444332 247 99999999999887432211110 01111 1222
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+..++|+|+++++++..+ ...||+++|.+|.
T Consensus 228 ----------~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 228 ----------MKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp ----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ----------CCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 134567899999999888643 3469999999875
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=2e-06 Score=77.81 Aligned_cols=153 Identities=8% Similarity=-0.055 Sum_probs=95.0
Q ss_pred CCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|++||+|++.. + +++..+++|+.|+.++++++...-..-.+||++||...+...
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~---------- 176 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV---------- 176 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC----------
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC----------
Confidence 46899999998532 1 334578999999999999987652223589999998666321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+.+.++.+ ..+ +.+..|+|+.|..+.......... ....+.+ ..|+
T Consensus 177 ~--------~~~~Y~asKaal~~l~~~la~e~~~~g---Irvn~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~- 239 (296)
T 3k31_A 177 P--------HYNVMGVCKAALEASVKYLAVDLGKQQ---IRVNAISAGPVRTLASSGISDFHY---ILTWNKY--NSPL- 239 (296)
T ss_dssp T--------TTTHHHHHHHHHHHHHHHHHHHHHTTT---EEEEEEEECCCCCSSCCSCHHHHH---HHHHHHH--HSTT-
T ss_pred C--------CchhhHHHHHHHHHHHHHHHHHHhhcC---cEEEEEEECCCcCchhhcccchHH---HHHHHHh--cCCC-
Confidence 0 0000 12344444444443332 247 999999999999876543221110 1111111 1222
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCccc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVFK 201 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~s 201 (309)
..+...+|+|+++++++.. ....|++++|.+|...+
T Consensus 240 -----------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~ 277 (296)
T 3k31_A 240 -----------RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVV 277 (296)
T ss_dssp -----------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred -----------CCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCcccc
Confidence 1345688999999998864 23569999999887654
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=6.5e-07 Score=79.53 Aligned_cols=155 Identities=12% Similarity=0.066 Sum_probs=93.1
Q ss_pred CCCCccEEEEeeccc-CC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWAS-RP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...++|++||+|+.. .. ++++.+++|+.|+.++++++...- .+ .|||++||...+...
T Consensus 85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 154 (264)
T 3ucx_A 85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQ--------- 154 (264)
T ss_dssp HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCC---------
T ss_pred HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCC---------
Confidence 345789999999742 21 334568999999999999875430 02 599999998766421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH------HHHHHHHHHh
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG------TLCVYAAICK 147 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~------~~~i~~~l~~ 147 (309)
.. ... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|+++.......... .-.++..+
T Consensus 155 ~~---------~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-- 220 (264)
T 3ucx_A 155 AK---------YGAYKMAKSALLAMSQTLATELGEKG---IRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAA-- 220 (264)
T ss_dssp TT---------CHHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHH--
T ss_pred Cc---------cHHHHHHHHHHHHHHHHHHHHhCccC---eEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHH--
Confidence 00 000 12344444444444332 257 999999999999875322111000 00000000
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..+. ....+..++|+|+++++++... ...|++++|.+|..
T Consensus 221 ~~~~------------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 221 AAGS------------DLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp HTTS------------SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred hccC------------CcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 0011 2245678999999999888642 35699999998874
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.45 E-value=7.9e-07 Score=79.59 Aligned_cols=158 Identities=9% Similarity=0.031 Sum_probs=92.6
Q ss_pred CCccEEEEeecccCC-------------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCC
Q 045430 11 TDVTHIFYVTWASRP-------------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++...- .+ .|||++||...+..
T Consensus 85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--------- 154 (280)
T 1xkq_A 85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQ--------- 154 (280)
T ss_dssp SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSS---------
T ss_pred CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCC---------
Confidence 468999999984321 234568999999999999986530 13 79999999876642
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcc-hhHHHHHHHHHHHhHhCC
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMM-NVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~-~~~~~~~i~~~l~~~~g~ 151 (309)
.. +.... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|+++...... ....... +....+....
T Consensus 155 --~~------~~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~ 222 (280)
T 1xkq_A 155 --AQ------PDFLYYAIAKAALDQYTRSTAIDLAKFG---IRVNSVSPGMVETGFTNAMGMPDQASQK-FYNFMASHKE 222 (280)
T ss_dssp --CC------CSSHHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCBCSSHHHHTTCCHHHHHH-HHHHHHHCTT
T ss_pred --CC------CcccHHHHHHHHHHHHHHHHHHHhccCC---eEEEEEeeCcCcCCcccccccccccccc-hHHHHHHHHc
Confidence 10 00000 02344444444444321 257 99999999999987421110 0000000 0001111111
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC---CCCCcceeecCCCcc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP---YARNEAFNCSNGDVF 200 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~~g~~~ 200 (309)
.. ....+.+++|+|+++++++..+ ...|+.++|.+|...
T Consensus 223 ~~----------p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~ 264 (280)
T 1xkq_A 223 CI----------PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 264 (280)
T ss_dssp TC----------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred CC----------CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence 11 1134678999999999888643 356999999988643
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.45 E-value=5.7e-07 Score=79.10 Aligned_cols=149 Identities=9% Similarity=-0.079 Sum_probs=89.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 148 (247)
T 1uzm_A 80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI----------G- 148 (247)
T ss_dssp SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC----------C-
Confidence 468999999985321 33557899999999999987531 0146899999998654311 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|.++........ ....+ ....+
T Consensus 149 -------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~-----~~~~~----~~~~p-- 207 (247)
T 1uzm_A 149 -------NQANYAASKAGVIGMARSIARELSKAN---VTANVVAPGYIDTDMTRALDER-----IQQGA----LQFIP-- 207 (247)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHHSCHH-----HHHHH----GGGCT--
T ss_pred -------CChhHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEEeCCCcccchhhcCHH-----HHHHH----HhcCC--
Confidence 0000 12344444454444432 247 9999999999977531111000 00011 00111
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
...+.+++|+|+++++++..+ ...|+.++|.+|..
T Consensus 208 --------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~ 244 (247)
T 1uzm_A 208 --------AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMG 244 (247)
T ss_dssp --------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred --------CCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence 124678999999999888643 34699999998864
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.45 E-value=2.4e-07 Score=80.72 Aligned_cols=140 Identities=10% Similarity=-0.020 Sum_probs=80.7
Q ss_pred CccEEEEeecccC-------C---ChHHHHHhHHHHHHHHHHHhCcCC--C------C-----CceEEEEeCCccccCCc
Q 045430 12 DVTHIFYVTWASR-------P---TEAENCEVNGAMLRNVLRSVIPNA--P------N-----LRHVCLQTGGKHYVGPF 68 (309)
Q Consensus 12 ~vd~V~H~A~~~~-------~---~~~~~~~vNv~gt~nll~a~~~~~--~------~-----v~r~v~~Ss~~vYG~~~ 68 (309)
++|+|||+|+... . ++++.+++|+.|+.++++++...- . + ..|||++||...+...
T Consensus 81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~- 159 (250)
T 1yo6_A 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD- 159 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT-
T ss_pred CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC-
Confidence 6899999998533 1 234578999999999999875430 0 2 5799999998776431
Q ss_pred cccCCCCCCCCCCCCCCCCCCcc---cchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHH
Q 045430 69 ESFGKIRPHDTPFTEDLPRLNVT---NFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYA 143 (309)
Q Consensus 69 ~~~~~~~~~~~p~~E~~p~~p~p---~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~ 143 (309)
. . ++.+..+.. .+|.+.+.+++.++.+ ..+ +.++++||+.|.++...
T Consensus 160 ---------~--~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~------------- 211 (250)
T 1yo6_A 160 ---------N--T-SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN---VLVVNFCPGWVQTNLGG------------- 211 (250)
T ss_dssp ---------C--C-STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT---CEEEEEECCCC-------------------
T ss_pred ---------c--c-cccccCCccHHHHHHHHHHHHHHHHHHHhccCC---eEEEEEcCCceecCCCC-------------
Confidence 1 1 111111111 2234444454444432 136 99999999988664210
Q ss_pred HHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCcccH
Q 045430 144 AICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDVFKW 202 (309)
Q Consensus 144 ~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~~s~ 202 (309)
. ..+...+++|++++.++..+. ..|+.+. .||..++|
T Consensus 212 ------~---------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~-~~g~~~~~ 250 (250)
T 1yo6_A 212 ------K---------------NAALTVEQSTAELISSFNKLDNSHNGRFFM-RNLKPYEF 250 (250)
T ss_dssp ----------------------------HHHHHHHHHHHTTCCGGGTTCEEE-TTEEECCC
T ss_pred ------C---------------CCCCCHHHHHHHHHHHHhcccccCCCeEEE-ECCcCCCC
Confidence 0 023467889999999887653 2455444 45555554
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.9e-07 Score=81.77 Aligned_cols=153 Identities=12% Similarity=-0.040 Sum_probs=91.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC----CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN----APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~----~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..+|+|||+|+.... ++++.+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~---------~ 170 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV---------M 170 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC---------T
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC---------C
Confidence 468999999985321 23456789999999999987541 0135799999998766421 0
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcch-------hHHHHHHHHHHHh
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMN-------VVGTLCVYAAICK 147 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~-------~~~~~~i~~~l~~ 147 (309)
. ... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|.++....... ... -.....+.
T Consensus 171 ~---------~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~- 236 (279)
T 3sju_A 171 Y---------AAPYTASKHGVVGFTKSVGFELAKTG---ITVNAVCPGYVETPMAERVREGYARHWGVTE-QEVHERFN- 236 (279)
T ss_dssp T---------CHHHHHHHHHHHHHHHHHHHHTGGGT---EEEEEEEESSBCSHHHHHHHHSCCSSSCCCH-HHHHHHHH-
T ss_pred C---------ChhHHHHHHHHHHHHHHHHHHHHhhC---cEEEEEeeCcccchHHHHHHhhhhhcccCCh-HHHHHHHH-
Confidence 0 000 12344444444444432 246 999999999998763211000 000 00000000
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCc
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDV 199 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~ 199 (309)
... ....+..++|+|+++++++..+. ..|++++|.+|..
T Consensus 237 -~~~------------p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~ 277 (279)
T 3sju_A 237 -AKI------------PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLG 277 (279)
T ss_dssp -TTC------------TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred -hcC------------CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence 011 22356789999999998886532 5699999998753
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.8e-07 Score=81.15 Aligned_cols=152 Identities=9% Similarity=-0.007 Sum_probs=91.8
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC---CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA---PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~---~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|++||+|++... +++..+++|+.|+.++++++...- ..-.+||++||...|... ..
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~ 167 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL---------PD 167 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------TT
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC---------CC
Confidence 468999999985322 234578999999999999875430 013589999998766421 00
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
... ..+|.+.+.+.+..+.+ ..+ +.+..|+|+.|..+........-. ....+. ...|
T Consensus 168 ---------~~~Y~asK~a~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~--~~~p--- 227 (266)
T 4egf_A 168 ---------HYAYCTSKAGLVMATKVLARELGPHG---IRANSVCPTVVLTEMGQRVWGDEA---KSAPMI--ARIP--- 227 (266)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESCBCSHHHHHHTCSHH---HHHHHH--TTCT---
T ss_pred ---------ChHHHHHHHHHHHHHHHHHHHHhhhC---eEEEEEEeCCCcCchhhhhccChH---HHHHHH--hcCC---
Confidence 000 12344444444444432 247 999999999998863211100000 000110 1112
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
...+..++|+|+++++++..+ ...||+++|.+|...
T Consensus 228 ---------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 228 ---------LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ---------CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence 123557899999999988643 356999999988654
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.44 E-value=6e-07 Score=79.89 Aligned_cols=166 Identities=14% Similarity=0.013 Sum_probs=95.4
Q ss_pred HHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCcc
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~ 69 (309)
+++.++.+.++|++||+|+.... ++++.+++|+.|+.++++++. +. +-.|||++||...|...
T Consensus 76 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~-- 151 (267)
T 3t4x_A 76 CQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER--KEGRVIFIASEAAIMPS-- 151 (267)
T ss_dssp HHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TEEEEEEECCGGGTSCC--
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCEEEEEcchhhccCC--
Confidence 34455556679999999985322 233458999999777766653 33 45799999998766321
Q ss_pred ccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH------HHHH
Q 045430 70 SFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV------GTLC 140 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~------~~~~ 140 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+......... ..-.
T Consensus 152 --------~--------~~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~ 212 (267)
T 3t4x_A 152 --------Q--------EMAHYSATKTMQLSLSRSLAELTTGTN---VTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEE 212 (267)
T ss_dssp --------T--------TCHHHHHHHHHHHHHHHHHHHHTTTSE---EEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHH
T ss_pred --------C--------cchHHHHHHHHHHHHHHHHHHHhCCCC---eEEEEEeCCeecCccHHHHHhhcCcccCCCHHH
Confidence 0 0000 12344445555554442 235 89999999998876311100000 0000
Q ss_pred HHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCccc
Q 045430 141 VYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVFK 201 (309)
Q Consensus 141 i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~s 201 (309)
......+.. .+ .. ....+..++|+|+++++++.. ....||+++|.+|...|
T Consensus 213 ~~~~~~~~~-~~----~~-----~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 213 AEKRFMKEN-RP----TS-----IIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp HHHHHHHHH-CT----TC-----SSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred HHHHHhhcc-CC----cc-----cccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 000000000 00 00 124577899999999988864 23569999999987654
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.43 E-value=6.9e-07 Score=78.37 Aligned_cols=146 Identities=12% Similarity=0.025 Sum_probs=88.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++. +. +.+|||++||...+...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~---------- 148 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ--RHGRIVNIASVVGVTGN---------- 148 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCTHHHHCC----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCcEEEEECCHHhcCCC----------
Confidence 468999999985321 334578999999777666653 33 46899999998665321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|.++.......... ..+. ...|+
T Consensus 149 ~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~~~~~~~-----~~~~--~~~p~- 209 (246)
T 2uvd_A 149 P--------GQANYVAAKAGVIGLTKTSAKELASRN---ITVNAIAPGFIATDMTDVLDENIK-----AEML--KLIPA- 209 (246)
T ss_dssp T--------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBGGGCSSCCCTTHH-----HHHH--HTCTT-
T ss_pred C--------CCchHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEEeccccCcchhhcCHHHH-----HHHH--hcCCC-
Confidence 0 0000 12334444343333321 257 999999999998874322111100 0111 11121
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..+.+++|+|+++++++..+ ...|+.++|.+|.
T Consensus 210 -----------~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 210 -----------AQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp -----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred -----------CCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence 23668999999999888643 2459999998875
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.43 E-value=6.8e-07 Score=79.50 Aligned_cols=149 Identities=13% Similarity=0.022 Sum_probs=94.3
Q ss_pred CCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
..+|+|||+|++... + +++.+++|+.|+.++++++...-..-.|||++||...||.+ .
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~--- 145 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF----------G--- 145 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH----------H---
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC----------C---
Confidence 468999999985321 2 24467999999999999986542113699999999777321 0
Q ss_pred CCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 82 TEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 82 ~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+++........ ....+.+ ..|+
T Consensus 146 ------~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~--~~p~----- 204 (263)
T 2a4k_A 146 ------LAHYAAGKLGVVGLARTLALELARKG---VRVNVLLPGLIQTPMTAGLPPW-----AWEQEVG--ASPL----- 204 (263)
T ss_dssp ------HHHHHHCSSHHHHHHHHHHHHHTTTT---CEEEEEEECSBCCGGGTTSCHH-----HHHHHHH--TSTT-----
T ss_pred ------cHHHHHHHHHHHHHHHHHHHHhhhhC---cEEEEEEeCcCcCchhhhcCHH-----HHHHHHh--cCCC-----
Confidence 000 13344455555444432 246 9999999999999854332111 1111111 1221
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
..+...+|+|+++++++..+ ...|+.++|.+|...
T Consensus 205 -------~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 205 -------GRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSI 241 (263)
T ss_dssp -------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred -------CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCccc
Confidence 13567899999999888643 356999999988654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.9e-06 Score=77.40 Aligned_cols=155 Identities=11% Similarity=-0.006 Sum_probs=93.3
Q ss_pred CCccEEEEeeccc---CC-------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWAS---RP-------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~---~~-------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.++|++||+|++. .+ ++++.+++|+.|+.++++++ ++. +-.|||++||...+...
T Consensus 104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~Iv~isS~~~~~~~--------- 172 (283)
T 3v8b_A 104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR--GGGAIVVVSSINGTRTF--------- 172 (283)
T ss_dssp SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCSBTTTBC---------
T ss_pred CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCceEEEEcChhhccCC---------
Confidence 4689999999853 11 23457899999999999998 443 35799999998665321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
..| .... ..+|.+.+.+.+..+.+ ..+ +.+..|+|+.|..+-......... .....+.
T Consensus 173 -~~~------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~~---------~~~~~~~ 233 (283)
T 3v8b_A 173 -TTP------GATAYTATKAAQVAIVQQLALELGKHH---IRVNAVCPGAIETNISDNTKLRHE---------EETAIPV 233 (283)
T ss_dssp -CST------TCHHHHHHHHHHHHHHHHHHHHTTTTT---EEEEEEEECSBSSCTTCCTTBCCH---------HHHSCCC
T ss_pred -CCC------CchHHHHHHHHHHHHHHHHHHHhCccC---cEEEEEEeCCCcCCcccccccccc---------hhhhhhh
Confidence 100 0000 12344445555554443 246 999999999998875432211000 0011112
Q ss_pred eecCCccccccc--eeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGY--SVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~--~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
....... .. .-+...+|+|+++++++... ...|++++|.+|.
T Consensus 234 ~~~~~~~---p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 234 EWPKGQV---PITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp BCTTCSC---GGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred hhhhhcC---ccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence 1111111 11 34567899999999888642 3569999998875
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=4.3e-07 Score=80.16 Aligned_cols=154 Identities=10% Similarity=-0.041 Sum_probs=92.1
Q ss_pred CCccEEEEeeccc-CC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-RP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|++. .. +++..+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 140 (254)
T 1zmt_A 71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----------K 140 (254)
T ss_dssp SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC----------T
T ss_pred CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC----------C
Confidence 4689999999854 21 23457899999999999887421 0035799999998666421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHH--H-HHHHHHHhHhCCc
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGT--L-CVYAAICKHEGVP 152 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~--~-~i~~~l~~~~g~~ 152 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|+||.......--.. . .....+.+ ..|
T Consensus 141 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~--~~p 207 (254)
T 1zmt_A 141 --------ELSTYTSARAGACTLANALSKELGEYN---IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK--VTA 207 (254)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH--HSS
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEecCccccccccccCCCcccccChHHHHHHhc--cCC
Confidence 0000 12344444444444332 247 9999999999999875432210000 0 00000100 011
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~ 199 (309)
+ ..+...+|+|+++++++..+. ..|+.++|.+|..
T Consensus 208 ~------------~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 208 L------------QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP 244 (254)
T ss_dssp S------------SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred C------------CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence 1 124578999999998886532 4699999988754
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.42 E-value=4.5e-07 Score=81.37 Aligned_cols=156 Identities=8% Similarity=-0.043 Sum_probs=91.7
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|++... +++..+++|+.|+.++++++...- .+-.+||++||...+... .
T Consensus 102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------~- 170 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV----------G- 170 (277)
T ss_dssp SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------C-
Confidence 468999999985321 334578999999999998875420 134689999998655321 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+++|+|+.|++|......... .+ .+. .
T Consensus 171 -------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~t~~~~~~~~~~------------~~-~~~-~ 226 (277)
T 3gvc_A 171 -------GTGAYGMSKAGIIQLSRITAAELRSSG---IRSNTLLPAFVDTPMQQTAMAMF------------DG-ALG-A 226 (277)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHHHHTCC--------------------
T ss_pred -------CchhHHHHHHHHHHHHHHHHHHhcccC---eEEEEEeeCCccCchHHHhhhcc------------hh-hHH-H
Confidence 0000 12344444444443332 257 99999999999987421100000 00 000 0
Q ss_pred CCccc--cccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 157 GSKDC--WEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 157 G~~~~--~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
..... ......+..++|+|+++++++..+ ...||+++|.+|...+
T Consensus 227 ~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 227 GGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred HhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence 00000 001234678999999999988643 3569999999887653
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.42 E-value=6.7e-07 Score=79.24 Aligned_cols=154 Identities=10% Similarity=0.033 Sum_probs=89.1
Q ss_pred CCccEEEEeeccc-CC------C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-RP------T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~------~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.++|++||+|+.. .. + +++.+++|+.|+.++++++...-..-.|||++||...+... . |
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-~ 153 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG----------G-P 153 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC----------S-T
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC----------C-C
Confidence 4789999999843 11 2 24578999999999999997652112389999998777211 0 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
.... ..+|.+.+.+.+..+.+. .. +.+..++|+.|..+-....... ...+ ....
T Consensus 154 ------~~~~Y~asKaa~~~l~~~la~e~~~~---I~vn~v~PG~v~T~~~~~~~~~--------~~~~-------~~~~ 209 (259)
T 3edm_A 154 ------GALAYATSKGAVMTFTRGLAKEVGPK---IRVNAVCPGMISTTFHDTFTKP--------EVRE-------RVAG 209 (259)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCBCC--------------------------------
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHHCCC---CEEEEEEECCCcCcccccccCh--------HHHH-------HHHh
Confidence 0000 123444555555555431 23 8999999999877643221100 0000 0001
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccH
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKW 202 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~ 202 (309)
.. ....+..++|+|+++++++... ...|+.|+|.+|...+.
T Consensus 210 ~~---p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 210 AT---SLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE 252 (259)
T ss_dssp --------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred cC---CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence 11 2245668999999999888643 34699999988876543
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.3e-06 Score=78.12 Aligned_cols=156 Identities=12% Similarity=0.075 Sum_probs=95.7
Q ss_pred ccCCCCccEEEEee-cccCC-----------C---hHHHHHhHHHHHHHHHHHhCcCC--------CCCceEEEEeCCcc
Q 045430 7 LSKLTDVTHIFYVT-WASRP-----------T---EAENCEVNGAMLRNVLRSVIPNA--------PNLRHVCLQTGGKH 63 (309)
Q Consensus 7 ~~~~~~vd~V~H~A-~~~~~-----------~---~~~~~~vNv~gt~nll~a~~~~~--------~~v~r~v~~Ss~~v 63 (309)
+....++|+|+|+| +.... + +++.+++|+.|+.++++++.... .+-.+||++||...
T Consensus 98 ~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 177 (281)
T 3ppi_A 98 ANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG 177 (281)
T ss_dssp HTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG
T ss_pred HHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc
Confidence 35556899999994 43211 1 36678999999999999875220 12358999999876
Q ss_pred ccCCccccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHH
Q 045430 64 YVGPFESFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLC 140 (309)
Q Consensus 64 YG~~~~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~ 140 (309)
+... . .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+-........
T Consensus 178 ~~~~----------~--------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~~~---- 232 (281)
T 3ppi_A 178 YEGQ----------I--------GQTAYAAAKAGVIGLTIAAARDLSSAG---IRVNTIAPGTMKTPIMESVGEEA---- 232 (281)
T ss_dssp TSCC----------T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHTTCHHH----
T ss_pred cCCC----------C--------CCcccHHHHHHHHHHHHHHHHHHhhcC---eEEEEEecCcCCchhhhcccHHH----
Confidence 6421 0 0000 02334444444433332 247 99999999999776322211110
Q ss_pred HHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCccc
Q 045430 141 VYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFK 201 (309)
Q Consensus 141 i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s 201 (309)
...+. ...++ + ..+.+++|+|+++++++..+...|++++|.+|..++
T Consensus 233 -~~~~~--~~~~~--~---------~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 233 -LAKFA--ANIPF--P---------KRLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp -HHHHH--HTCCS--S---------SSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred -HHHHH--hcCCC--C---------CCCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 00111 12221 1 245689999999999998766789999999987654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.41 E-value=6.4e-07 Score=78.86 Aligned_cols=149 Identities=13% Similarity=0.046 Sum_probs=91.9
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|++||+|++... ++++.+++|+.|+.++++++... ..+-.|||++||...+... .
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~- 150 (248)
T 3op4_A 82 GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN----------A- 150 (248)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC----------C-
Confidence 468999999985322 33457899999999999987531 0134799999997665321 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+-......... ... ....|
T Consensus 151 -------~~~~Y~asK~a~~~l~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~~~-----~~~--~~~~p---- 209 (248)
T 3op4_A 151 -------GQANYAAAKAGVIGFTKSMAREVASRG---VTVNTVAPGFIETDMTKALNDEQR-----TAT--LAQVP---- 209 (248)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBSSTTTTTSCHHHH-----HHH--HHTCT----
T ss_pred -------CChHHHHHHHHHHHHHHHHHHHHHHhC---eEEEEEeeCCCCCchhhhcCHHHH-----HHH--HhcCC----
Confidence 0000 02344444444444332 247 999999999998775433221110 011 01122
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
...+.+++|+|+++++++..+ ...||+++|.+|..
T Consensus 210 --------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~~ 246 (248)
T 3op4_A 210 --------AGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY 246 (248)
T ss_dssp --------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred --------CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCee
Confidence 134668999999999888643 34599999998753
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.2e-07 Score=80.05 Aligned_cols=155 Identities=8% Similarity=-0.037 Sum_probs=93.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++... ..+-.+||++||...|... ..
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~- 149 (269)
T 3vtz_A 80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT---------KN- 149 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC---------TT-
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC---------CC-
Confidence 468999999985321 23446789999999999986542 0135799999999887531 00
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh-cCCCcceeEEeecCCceecccCCCcchhH-----HH-HHHHHHHHhHhCC
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK-RKGPLSLTWSVHRPHIIFGFSPYSMMNVV-----GT-LCVYAAICKHEGV 151 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~-~~~~~~~~~~ilRP~~VyGp~~~~~~~~~-----~~-~~i~~~l~~~~g~ 151 (309)
... ..+|.+.+.+.+.++.+ ..+ +.++.|+|+.|+++......... .. -.....+. ...
T Consensus 150 --------~~~Y~asKaa~~~l~~~la~e~~~~---i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 216 (269)
T 3vtz_A 150 --------AAAYVTSKHALLGLTRSVAIDYAPK---IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWG--RQH 216 (269)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHTTT---EEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHH--HHS
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHhcCC---CEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHH--hcC
Confidence 000 12344455555555443 125 99999999999886421110000 00 00000000 001
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
....+.+++|+|+++++++..+ ...|++++|.+|...
T Consensus 217 ------------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 255 (269)
T 3vtz_A 217 ------------PMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLS 255 (269)
T ss_dssp ------------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ------------CCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCccc
Confidence 2235668999999999888643 356999999988653
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.40 E-value=8.1e-07 Score=79.22 Aligned_cols=148 Identities=7% Similarity=-0.082 Sum_probs=90.8
Q ss_pred CCccEEEEeeccc-C------C----ChHHHHHhHHHH----HHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 11 TDVTHIFYVTWAS-R------P----TEAENCEVNGAM----LRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~------~----~~~~~~~vNv~g----t~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
..+|+|||+|+.. . . ++++.+++|+.| ++++++++++. +.+|||++||...+...
T Consensus 110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~~iv~isS~~~~~~~-------- 179 (279)
T 3ctm_A 110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN--GKGSLIITSSISGKIVN-------- 179 (279)
T ss_dssp SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCCTTSCC---------
T ss_pred CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCeEEEECchHhccCC--------
Confidence 3589999999843 2 1 224477999999 67888888765 56899999998655310
Q ss_pred CCCCCCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
.. .+. + .+|.+.|.+++.++.+ .+... .+++++|+.|.++-........ ...+.+ ..|
T Consensus 180 --~~--------~~~~~Y~~sK~a~~~~~~~la~e-~~~~~-~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~~--~~p 240 (279)
T 3ctm_A 180 --IP--------QLQAPYNTAKAACTHLAKSLAIE-WAPFA-RVNTISPGYIDTDITDFASKDM-----KAKWWQ--LTP 240 (279)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHHHHH-TTTTC-EEEEEEECSBSSTTTSSCCHHH-----HHHHHH--HST
T ss_pred --CC--------CCcccHHHHHHHHHHHHHHHHHH-hcccC-CEEEEeccCCccccccccChHH-----HHHHHH--hCC
Confidence 00 011 1 3345556666665553 22112 7899999999887432211110 001111 111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
...+.+++|+|+++++++..+ ...|+.++|.+|..
T Consensus 241 ------------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 241 ------------LGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp ------------TCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred ------------ccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence 123567888999999888643 35699999998854
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1.1e-06 Score=78.83 Aligned_cols=156 Identities=11% Similarity=-0.087 Sum_probs=91.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++...-.+..|||++||...+... . +
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~-~- 173 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------V-P- 173 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------C-S-
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------C-C-
Confidence 468999999985321 334578999999999999987642134799999998655321 0 0
Q ss_pred CCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH-H-----HHHHHHHHHhHhCCc
Q 045430 82 TEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV-G-----TLCVYAAICKHEGVP 152 (309)
Q Consensus 82 ~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~-~-----~~~i~~~l~~~~g~~ 152 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+++|+|+.|.++......... . .-.....+.+....|
T Consensus 174 -----~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 245 (283)
T 1g0o_A 174 -----KHAVYSGSKGAIETFARCMAIDMADKK---ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP 245 (283)
T ss_dssp -----SCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHhcccC---eEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC
Confidence 0000 12344444444444332 247 99999999999886311100000 0 000000110000111
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+...+|+|+++++++..+ ...|+.++|.+|.
T Consensus 246 ------------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 246 ------------LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp ------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ------------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 123568899999999988643 3569999998874
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.40 E-value=2.1e-06 Score=75.36 Aligned_cols=148 Identities=11% Similarity=-0.009 Sum_probs=89.9
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..+|+|||+|++... ++++.+++|+.|+.++++++... ..+..|||++||...+|.+ .
T Consensus 76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~- 144 (245)
T 1uls_A 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL----------G- 144 (245)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC----------C-
Confidence 468999999985321 23456799999999998876432 1146899999998744421 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|..+-....... ....+.+ ..|+
T Consensus 145 --------~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~--~~p~--- 203 (245)
T 1uls_A 145 --------QANYAASMAGVVGLTRTLALELGRWG---IRVNTLAPGFIETRMTAKVPEK-----VREKAIA--ATPL--- 203 (245)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCTTTSSSCHH-----HHHHHHH--TCTT---
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHhHhC---eEEEEEEeCcCcCcchhhcCHH-----HHHHHHh--hCCC---
Confidence 000 12333334333333321 247 9999999999987643322111 1111111 1121
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..+...+|+|+++++++..+ ...|+.+++.+|..
T Consensus 204 ---------~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 204 ---------GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (245)
T ss_dssp ---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred ---------CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence 12457899999999888643 34699999988754
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1.8e-06 Score=76.59 Aligned_cols=141 Identities=11% Similarity=0.051 Sum_probs=90.4
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC-----cCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI-----PNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~-----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..+|+|||+|+.... ++++.+++|+.|+.++++++. +. +-.|||++||...+...
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~g~iv~isS~~~~~~~--------- 171 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR--QGGRIITLSSVSGVMGN--------- 171 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--SCEEEEEECCHHHHHCC---------
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCcEEEEEcchHhccCC---------
Confidence 468999999985322 335578999999999999873 22 35799999998766421
Q ss_pred CCCCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 77 HDTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 77 ~~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
. +.+-|+..| +.+..+.+ ..+ +.++.++|+.|.++........ ...+. .
T Consensus 172 -~------------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~------~~~~~--~ 227 (267)
T 4iiu_A 172 -R------------GQVNYSAAKAGIIGATKALAIELAKRK---ITVNCIAPGLIDTGMIEMEESA------LKEAM--S 227 (267)
T ss_dssp -T------------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSTTCCCCHHH------HHHHH--H
T ss_pred -C------------CCchhHHHHHHHHHHHHHHHHHHhhcC---eEEEEEEEeeecCCcccccHHH------HHHHH--h
Confidence 0 112244444 33333322 247 9999999999998765332111 11111 1
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..|+ ..+..++|+|+++++++..+ ...||+++|.+|-
T Consensus 228 ~~p~------------~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~ 266 (267)
T 4iiu_A 228 MIPM------------KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM 266 (267)
T ss_dssp TCTT------------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred cCCC------------CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence 1221 23557899999999888643 3569999998773
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.39 E-value=3.4e-06 Score=73.94 Aligned_cols=149 Identities=9% Similarity=0.054 Sum_probs=91.4
Q ss_pred CccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 12 ~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~ 82 (309)
.+|+|||+|++... + +++.+++|+.|+.++++++...-.+-.|||++||...+... ..
T Consensus 91 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~---------~~---- 157 (255)
T 3icc_A 91 KFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL---------PD---- 157 (255)
T ss_dssp CEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC---------TT----
T ss_pred cccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC---------CC----
Confidence 48999999985322 2 24467999999999999997642123589999998766421 00
Q ss_pred CCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 83 EDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 83 E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+-........... .... ...+
T Consensus 158 -----~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~~~----~~~~-~~~~------- 217 (255)
T 3icc_A 158 -----FIAYSMTKGAINTMTFTLAKQLGARG---ITVNAILPGFVKTDMNAELLSDPMMK----QYAT-TISA------- 217 (255)
T ss_dssp -----BHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBCCSSSTTTTTSHHHH----HHHH-HTST-------
T ss_pred -----cchhHHhHHHHHHHHHHHHHHHHhcC---eEEEEEEEeeecccchhhhcccHHHH----Hhhh-ccCC-------
Confidence 000 02344444444443332 247 99999999999887543322211100 0000 1111
Q ss_pred cccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...+..++|+|+++++++... ...|++++|.+|.
T Consensus 218 -----~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~ 253 (255)
T 3icc_A 218 -----FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS 253 (255)
T ss_dssp -----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred -----cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence 134567899999998888542 3569999999885
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=2.8e-06 Score=76.78 Aligned_cols=154 Identities=10% Similarity=-0.071 Sum_probs=92.6
Q ss_pred CCCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|++||+|++.. + +++..+++|+.|+.++++++...-..-.|||++||...+...
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~--------- 177 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM--------- 177 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC---------
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC---------
Confidence 357899999998542 1 334578999999999999987542123589999998776421
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
.. ... ..+|.+.+.+.+..+.+ ..+ +.+..|+|+.|..+.......... ....+.+ ..|+
T Consensus 178 ~~---------~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~ 240 (293)
T 3grk_A 178 PN---------YNVMGVAKAALEASVKYLAVDLGPQN---IRVNAISAGPIKTLAASGIGDFRY---ILKWNEY--NAPL 240 (293)
T ss_dssp TT---------TTHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCCCC------CCHHH---HHHHHHH--HSTT
T ss_pred Cc---------hHHHHHHHHHHHHHHHHHHHHHhHhC---CEEEEEecCCCcchhhhcccchHH---HHHHHHh--cCCC
Confidence 00 000 12344444444444432 247 999999999999875432211100 0111111 1222
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
..+..++|+|+++++++... ...|++++|.+|...+
T Consensus 241 ------------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 278 (293)
T 3grk_A 241 ------------RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVI 278 (293)
T ss_dssp ------------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred ------------CCCCCHHHHHHHHHHHcCccccCCcceEEEECCCcccC
Confidence 23456889999999888642 3569999999987653
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.39 E-value=8.2e-07 Score=79.36 Aligned_cols=154 Identities=7% Similarity=-0.049 Sum_probs=92.1
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|++... +++..+++|+.|+.++++++...- .+-.|||++||...+... .
T Consensus 101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~----------~ 170 (271)
T 4ibo_A 101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR----------A 170 (271)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC----------T
T ss_pred CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC----------C
Confidence 3468999999985321 334578999999999988765430 034699999997655321 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+........- .....+.+ ..|+
T Consensus 171 --------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~--~~p~-- 232 (271)
T 4ibo_A 171 --------TVAPYTVAKGGIKMLTRAMAAEWAQYG---IQANAIGPGYMLTDMNQALIDNP---EFDAWVKA--RTPA-- 232 (271)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSGGGHHHHHCH---HHHHHHHH--HSTT--
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHHhhhC---eEEEEEEeccEeCcchhhcccCH---HHHHHHHh--cCCC--
Confidence 0000 12344444454444432 257 99999999999886432111000 00111111 1222
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
..+..++|+|+++++++..+ ...||+++|.+|...+
T Consensus 233 ----------~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 233 ----------KRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp ----------CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred ----------CCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence 23456788999998887643 3569999999987654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=1.9e-07 Score=83.62 Aligned_cols=155 Identities=10% Similarity=0.009 Sum_probs=92.9
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|+.... +++..+++|+.|+.++++++...- .+-.+||++||...+... ..
T Consensus 104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~- 173 (277)
T 4fc7_A 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ---------AL- 173 (277)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC---------TT-
T ss_pred CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC---------CC-
Confidence 468999999984221 335578999999999999874320 024689999998766421 00
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
... ..+|.+.+.+.+..+.+ ..+ +.+..|+|+.|+++.....+... -.....+. ...|+
T Consensus 174 --------~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~~--~~~~~~~~--~~~p~--- 235 (277)
T 4fc7_A 174 --------QVHAGSAKAAVDAMTRHLAVEWGPQN---IRVNSLAPGPISGTEGLRRLGGP--QASLSTKV--TASPL--- 235 (277)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBSSSHHHHHHSCC--HHHHHHHH--HTSTT---
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEEECCEecchhhhhccCC--HHHHHHHh--ccCCC---
Confidence 000 12344444444444432 247 99999999999986310000000 00001110 12221
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccH
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKW 202 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~ 202 (309)
..+..++|+|+++++++... ...|++++|.+|..+++
T Consensus 236 ---------~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~ 274 (277)
T 4fc7_A 236 ---------QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTF 274 (277)
T ss_dssp ---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred ---------CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence 23557899999999988642 35699999999876654
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.36 E-value=8.9e-07 Score=78.86 Aligned_cols=148 Identities=9% Similarity=-0.063 Sum_probs=89.2
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 174 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN----------M- 174 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T-
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC----------C-
Confidence 468999999985322 33457899999999988887432 0135799999998666321 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+.++.+ ..+ +.++.++|+.|..+....... .... . .
T Consensus 175 -------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~---------~~~~----~---~ 228 (271)
T 4iin_A 175 -------GQTNYSASKGGMIAMSKSFAYEGALRN---IRFNSVTPGFIETDMNANLKD---------ELKA----D---Y 228 (271)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHHTTT---EEEEEEEECSBCCC----------------------------C
T ss_pred -------CchHhHHHHHHHHHHHHHHHHHHHHhC---cEEEEEEeCcccCCchhhhcH---------HHHH----H---H
Confidence 0000 12344444444444432 257 999999999997764322111 0000 0 0
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.... ....+.+++|+|+++++++..+ ...|++++|.+|-
T Consensus 229 ~~~~---~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 229 VKNI---PLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp GGGC---TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HhcC---CcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence 0111 2345678999999999888643 3569999999875
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=2.1e-06 Score=76.60 Aligned_cols=152 Identities=10% Similarity=-0.054 Sum_probs=91.4
Q ss_pred CCCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..++|+|||+|++.. + +++..+++|+.|+.++++++...-..-.|||++||...+...
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------- 152 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM--------- 152 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---------
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC---------
Confidence 347899999998432 1 234578999999999999997641011589999997555311
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
| .... ..+|.+.+.+.+.++.+ ..+ +.++.++|+.|.++........-. ....+.+ ..|+
T Consensus 153 ---~------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~ 215 (275)
T 2pd4_A 153 ---A------HYNVMGLAKAALESAVRYLAVDLGKHH---IRVNALSAGPIRTLASSGIADFRM---ILKWNEI--NAPL 215 (275)
T ss_dssp ---T------TCHHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCCCCTTGGGSTTHHH---HHHHHHH--HSTT
T ss_pred ---C------CchhhHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCccccchhhhccccHH---HHHHHHh--cCCc
Confidence 0 0000 12344444444444332 247 999999999999874322111000 1111111 1121
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.-+...+|+|+++++++..+ ...|+.+++.+|..
T Consensus 216 ------------~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~ 251 (275)
T 2pd4_A 216 ------------RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH 251 (275)
T ss_dssp ------------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ------------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 12346889999999988642 34689999988754
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.36 E-value=3.8e-06 Score=74.99 Aligned_cols=148 Identities=11% Similarity=0.015 Sum_probs=90.2
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
.++|++||+|++... ++++.+++|+.|+.++++++...-..-.+||++||....-.+ .
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~-----------~-- 174 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP-----------W-- 174 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC-----------S--
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC-----------C--
Confidence 468999999985321 335578999999999999986542234689999986433210 0
Q ss_pred CCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 82 TEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 82 ~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
+.... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|.++.......... ... ...|+
T Consensus 175 ----~~~~~Y~asKaa~~~l~~~la~e~~~~g---Irvn~v~PG~v~T~~~~~~~~~~~------~~~--~~~~~----- 234 (271)
T 3v2g_A 175 ----PGISLYSASKAALAGLTKGLARDLGPRG---ITVNIVHPGSTDTDMNPADGDHAE------AQR--ERIAT----- 234 (271)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCSSSSCSSCSSHH------HHH--HTCTT-----
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhhhhC---eEEEEEecCCCcCCcccccchhHH------HHH--hcCCC-----
Confidence 00000 02344444444443332 247 999999999999885432211111 111 11221
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..+...+|+|+++++++... ...|++++|.+|.
T Consensus 235 -------~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 235 -------GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp -------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred -------CCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence 12456889999999888542 3569999998774
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=3e-06 Score=75.02 Aligned_cols=152 Identities=11% Similarity=0.014 Sum_probs=93.7
Q ss_pred CCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..+|+|+|+|+... + ++...+++|+.|+.++++++...-..-.|||++||...+...
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------- 155 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM---------- 155 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC----------
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC----------
Confidence 46899999998532 1 224467999999999999987652223589999998666321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+........-. ....+.+ ..|+
T Consensus 156 --~------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~~~- 218 (266)
T 3oig_A 156 --P------NYNVMGVAKASLDASVKYLAADLGKEN---IRVNSISAGPIRTLSAKGISDFNS---ILKDIEE--RAPL- 218 (266)
T ss_dssp --T------TTHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCCCSGGGTTCTTHHH---HHHHHHH--HSTT-
T ss_pred --C------CcchhHHHHHHHHHHHHHHHHHHhhcC---cEEEEEecCcccccccccccchHH---HHHHHHh--cCCC-
Confidence 0 0000 12344444444443332 247 999999999998875433221111 1111111 1111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
..+..++|+|+++++++..+ ...|++++|.+|-..
T Consensus 219 -----------~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~ 255 (266)
T 3oig_A 219 -----------RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI 255 (266)
T ss_dssp -----------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred -----------CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence 23457889999999988643 356999999988654
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.36 E-value=4.4e-06 Score=74.20 Aligned_cols=155 Identities=8% Similarity=-0.082 Sum_probs=91.2
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++... ..+..|||++||...+... .
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 141 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT----------K- 141 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC----------T-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC----------C-
Confidence 368999999984321 34557899999988888877432 1146799999998776421 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHH--HH----HHHHHHHhHhCCc
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVG--TL----CVYAAICKHEGVP 152 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~--~~----~i~~~l~~~~g~~ 152 (309)
.... ..+|.+.+.+.+..+.+ .++. +.+++|||+.|.++.......... .- .....+.+ ..
T Consensus 142 -------~~~~Y~~sK~a~~~~~~~la~e-~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~- 209 (264)
T 2dtx_A 142 -------NASAYVTSKHAVIGLTKSIALD-YAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH--EH- 209 (264)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHH-HTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHH--HS-
T ss_pred -------CchhHHHHHHHHHHHHHHHHHH-hcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHh--cC-
Confidence 0000 12344555555555543 2222 789999999997753111000000 00 00000000 01
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
....+.+++|+|+++++++..+ ...|+.++|.+|..
T Consensus 210 -----------p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 247 (264)
T 2dtx_A 210 -----------PMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLS 247 (264)
T ss_dssp -----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -----------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence 1234678999999999888643 35699999998753
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=3.2e-06 Score=75.68 Aligned_cols=153 Identities=9% Similarity=-0.054 Sum_probs=92.9
Q ss_pred CCCccEEEEeecccC-----------C---ChHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccccCCccccCCC
Q 045430 10 LTDVTHIFYVTWASR-----------P---TEAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~-----------~---~~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
...+|+|||+|++.. . ++++.+++|+.++.++++++... ...-.|||++||...+...
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------- 173 (280)
T 3nrc_A 101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM------- 173 (280)
T ss_dssp CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC-------
T ss_pred cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC-------
Confidence 356899999998532 2 23447899999999999987643 1123689999998666421
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+.......... ......+ ..
T Consensus 174 -----~------~~~~Y~asKaal~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~ 234 (280)
T 3nrc_A 174 -----P------SYNTMGVAKASLEATVRYTALALGEDG---IKVNAVSAGPIKTLAASGISNFKK---MLDYNAM--VS 234 (280)
T ss_dssp -----T------TTHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCCCCSGGGGCTTHHH---HHHHHHH--HS
T ss_pred -----C------CchhhHHHHHHHHHHHHHHHHHHHHcC---cEEEEEeeccccchhhhcCcchHH---HHHHHHh--cC
Confidence 0 0000 12344444444443332 257 999999999999875432211111 1111111 11
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
|+ ..+..++|+|+++++++..+ ...|++++|.+|...
T Consensus 235 p~------------~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 235 PL------------KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHC 273 (280)
T ss_dssp TT------------CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred CC------------CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence 11 23456889999998877642 356999999988754
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.8e-06 Score=75.12 Aligned_cols=151 Identities=11% Similarity=-0.007 Sum_probs=91.4
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCc----CC--CCCceEEEEeCCccccCCccccCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIP----NA--PNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~----~~--~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
..++|+|||+|+.... +++..+++|+.|+.++++++.. .. .+.+|||++||...|...
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~------- 175 (276)
T 2b4q_A 103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM------- 175 (276)
T ss_dssp CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC-------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC-------
Confidence 3478999999984321 3355789999999888877642 21 123899999998776421
Q ss_pred CCCCCCCCCCCCCCC-c-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 75 RPHDTPFTEDLPRLN-V-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p-~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
.. .. . ..+|.+.+.+.+..+.+ ..+ +.+++++|+.|..+........ ....+.+...
T Consensus 176 --~~---------~~~~Y~asK~a~~~~~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~ 236 (276)
T 2b4q_A 176 --GE---------QAYAYGPSKAALHQLSRMLAKELVGEH---INVNVIAPGRFPSRMTRHIAND-----PQALEADSAS 236 (276)
T ss_dssp --CC---------SCTTHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCCCSTTTHHHHHC-----HHHHHHHHHT
T ss_pred --CC---------CccccHHHHHHHHHHHHHHHHHhcccC---eEEEEEEeccCcCcchhhcchh-----HHHHHHhhcC
Confidence 00 01 1 13455555555544432 247 9999999999987642111000 0011111001
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.| ...+..++|+|+++++++..+ ...|++++|.+|.
T Consensus 237 ~p------------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 237 IP------------MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp ST------------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CC------------CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 11 123568899999999988643 3469999998874
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.1e-06 Score=77.55 Aligned_cols=159 Identities=11% Similarity=0.006 Sum_probs=90.3
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CC-CceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PN-LRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~-v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..++|+|||+|+.... +++..+++|+.|+.++++++...- .+ ..|||++||...+...
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 146 (256)
T 1geg_A 77 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---------- 146 (256)
T ss_dssp TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC----------
Confidence 4478999999984321 234578999999998888775420 02 4799999998655311
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHH-HH-HHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTL-CV-YAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~-~i-~~~l~~~~g~~ 152 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|.++............ .. .....+.....
T Consensus 147 ~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (256)
T 1geg_A 147 P--------ELAVYSSSKFAVRGLTQTAARDLAPLG---ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR 215 (256)
T ss_dssp T--------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT
T ss_pred C--------CchhHHHHHHHHHHHHHHHHHHHHHcC---eEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhc
Confidence 0 0000 12344445454444432 247 99999999999886321100000000 00 00000000000
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
. ....+...+|+|+++++++..+ ...|+.++|.+|..
T Consensus 216 ~----------p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 216 I----------TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp C----------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred C----------CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 0 1124678999999999888643 34699999998754
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=2.5e-06 Score=75.70 Aligned_cols=153 Identities=11% Similarity=-0.042 Sum_probs=89.0
Q ss_pred CCccEEEEeecccCC----------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASRP----------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~----------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++ ++. +..|||++||...+...
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~--------- 159 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ--GSGMVVNTASVGGIRGI--------- 159 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSBC---------
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCEEEEEcchhhccCC---------
Confidence 468999999984321 23456799999888666554 343 46899999998665321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc----chhHHHHHHHHHHHhHh
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM----MNVVGTLCVYAAICKHE 149 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~----~~~~~~~~i~~~l~~~~ 149 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|+++..... ...... .....+. .
T Consensus 160 -~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~--~ 224 (267)
T 1iy8_A 160 -G--------NQSGYAAAKHGVVGLTRNSAVEYGRYG---IRINAIAPGAIWTPMVENSMKQLDPENPR-KAAEEFI--Q 224 (267)
T ss_dssp -S--------SBHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCSHHHHHHHHHHCTTCHH-HHHHHHH--T
T ss_pred -C--------CCccHHHHHHHHHHHHHHHHHHHHhcC---eEEEEEEeCCCcCcchhccccccChhhhh-hHHHHHh--c
Confidence 0 0000 12344444444443332 247 9999999999988632110 000000 0000000 0
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
..| ...+..++|+|+++++++..+ ...|+.++|.+|...+
T Consensus 225 ~~p------------~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 225 VNP------------SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp TCT------------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred cCC------------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence 111 124668999999999888643 3469999999886543
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.7e-06 Score=76.33 Aligned_cols=157 Identities=11% Similarity=0.011 Sum_probs=91.1
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCC-ceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNL-RHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v-~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|+.... ++++.+++|+.|+.++++++... ..+. .|||++||...+... .
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 149 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF----------P 149 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC----------T
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC----------C
Confidence 468999999985321 33457899999999999988652 0134 799999998666321 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC--c-
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV--P- 152 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~--~- 152 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+++++|+.|..+...... . .+.+..+. +
T Consensus 150 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~---~------~~~~~~~~~~~~ 209 (258)
T 3a28_C 150 --------ILSAYSTTKFAVRGLTQAAAQELAPKG---HTVNAYAPGIVGTGMWEQID---A------ELSKINGKPIGE 209 (258)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBCSHHHHHHH---H------HHHHHHCCCTTH
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHHHhhC---eEEEEEECCccCChhhhhhh---h------hhccccCCchHH
Confidence 0000 12344445444444332 247 99999999999765311100 0 00000000 0
Q ss_pred -eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 153 -LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 153 -~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
........ ....+..++|+|+++++++..+ ...|+.++|.+|...
T Consensus 210 ~~~~~~~~~---p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 210 NFKEYSSSI---ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp HHHHHHTTC---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred HHHHHHhcC---CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence 00000000 1123678999999999988643 356999999988643
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.2e-06 Score=78.11 Aligned_cols=148 Identities=9% Similarity=-0.105 Sum_probs=87.2
Q ss_pred CCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
.++|++||+|++... + ++..+++|+.|+.++++++...-..-.|||++||...+... ..
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~--- 171 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH---------PS--- 171 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC---------TT---
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC---------CC---
Confidence 468999999985321 2 34467899999999998876431112589999998766421 00
Q ss_pred CCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 82 TEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 82 ~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+........ .....+. ...
T Consensus 172 ------~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~----~~~~~~~--~~~------- 229 (267)
T 3u5t_A 172 ------YGIYAAAKAGVEAMTHVLSKELRGRD---ITVNAVAPGPTATDLFLEGKSD----EVRDRFA--KLA------- 229 (267)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHTTTSC---CEEEEEEECCBC---------------CHHHHH--TSS-------
T ss_pred ------chHHHHHHHHHHHHHHHHHHHhhhhC---CEEEEEEECCCcCccccccCCH----HHHHHHH--hcC-------
Confidence 000 13344455555555543 246 9999999999877632111000 0000000 011
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCC
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNG 197 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g 197 (309)
....+..++|+|+++++++.... ..|++++|.+|
T Consensus 230 -----p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 230 -----PLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp -----TTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred -----CCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 12345678999999999886432 46999999876
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.27 E-value=5e-06 Score=73.97 Aligned_cols=149 Identities=11% Similarity=0.025 Sum_probs=88.1
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCcc-ccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKH-YVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~v-YG~~~~~~~~~~~ 76 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++ ++. +.+|||++||..+ +.
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--~~g~iv~isS~~~~~~----------- 164 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES--DNPSIINIGSLTVEEV----------- 164 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC--SSCEEEEECCGGGTCC-----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEECCcchhcc-----------
Confidence 468999999985321 23446799999999998876 333 4689999999752 21
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
.. +.... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|.++........ -.....+. ...|+
T Consensus 165 -~~------~~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~--~~~p~ 229 (267)
T 1vl8_A 165 -TM------PNISAYAASKGGVASLTKALAKEWGRYG---IRVNVIAPGWYRTKMTEAVFSD---PEKLDYML--KRIPL 229 (267)
T ss_dssp -CS------SSCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBCSTTTHHHHTC---HHHHHHHH--HTCTT
T ss_pred -CC------CCChhHHHHHHHHHHHHHHHHHHhcccC---eEEEEEEeccCccccccccccC---hHHHHHHH--hhCCC
Confidence 10 00000 12344445554444432 247 9999999999977532111000 00111111 11121
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..+...+|+|+++++++..+ ...|+.++|.+|..
T Consensus 230 ------------~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 265 (267)
T 1vl8_A 230 ------------GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT 265 (267)
T ss_dssp ------------SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ------------CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCCC
Confidence 12456788999999888643 34699999988743
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.25 E-value=4.9e-06 Score=73.52 Aligned_cols=152 Identities=13% Similarity=0.047 Sum_probs=89.4
Q ss_pred CCCCccEEEEeecccC---------CChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASR---------PTEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~---------~~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+|||+|+... .++++.+++|+.|+.++++++... ..+..|||++||...+...
T Consensus 84 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------- 153 (253)
T 2nm0_A 84 THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS---------- 153 (253)
T ss_dssp HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH----------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC----------
Confidence 3456899999998421 255678899999999999876532 0035799999997554311
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.+++++|+.|..+........ ....+. ...|
T Consensus 154 --~------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~-----~~~~~~--~~~p-- 213 (253)
T 2nm0_A 154 --A------GQANYAASKAGLVGFARSLARELGSRN---ITFNVVAPGFVDTDMTKVLTDE-----QRANIV--SQVP-- 213 (253)
T ss_dssp --H------HHHHHHHHHHHHHHHHHHHHHHHCSSS---EEEEEEEECSBCC--------------CHHHHH--TTCT--
T ss_pred --C------CcHHHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEEeCcCcCcchhhcCHH-----HHHHHH--hcCC--
Confidence 0 0000 02334444444444332 246 9999999999876532111000 000010 0111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
...+...+|+|+++++++..+ ...|+.++|.+|...
T Consensus 214 ----------~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 214 ----------LGRYARPEEIAATVRFLASDDASYITGAVIPVDGGLGM 251 (253)
T ss_dssp ----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred ----------CCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcccc
Confidence 123568899999999888643 346999999987643
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=6.4e-06 Score=79.83 Aligned_cols=143 Identities=8% Similarity=-0.040 Sum_probs=85.2
Q ss_pred CCccEEEEeecccCC------ChH---HHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCcc-ccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------TEA---ENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKH-YVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~~~---~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~v-YG~~~~~~~~~~~~~~p 80 (309)
..+|.|||+|++... +++ ..+++|+.|+.|+++++... ++++||++||... +|.+ ..
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~~~g~~----------g~- 371 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAP----------GL- 371 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCT----------TC-
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHhcCCCC----------CC-
Confidence 468999999995322 333 35688999999999999876 6899999999754 4432 10
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
.. ..+|...+.+..+... .+ +++++|+|+.+++++..... . . ..+ ..
T Consensus 372 --------~~Yaaaka~l~~la~~~~~--~g---i~v~~i~pG~~~~~gm~~~~-----------~-~---~~~--~~-- 419 (486)
T 2fr1_A 372 --------GGYAPGNAYLDGLAQQRRS--DG---LPATAVAWGTWAGSGMAEGP-----------V-A---DRF--RR-- 419 (486)
T ss_dssp --------TTTHHHHHHHHHHHHHHHH--TT---CCCEEEEECCBC---------------------------C--TT--
T ss_pred --------HHHHHHHHHHHHHHHHHHh--cC---CeEEEEECCeeCCCcccchh-----------H-H---HHH--Hh--
Confidence 00 0122333444333332 57 99999999999886521100 0 0 011 11
Q ss_pred cccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHH
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKV 208 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~ 208 (309)
.-...++.+++++++..++..+.. .+.+.+ +.|..+.+.
T Consensus 420 ----~g~~~i~~e~~a~~l~~~l~~~~~---~~~v~~---~d~~~~~~~ 458 (486)
T 2fr1_A 420 ----HGVIEMPPETACRALQNALDRAEV---CPIVID---VRWDRFLLA 458 (486)
T ss_dssp ----TTEECBCHHHHHHHHHHHHHTTCS---SCEECE---ECHHHHHHH
T ss_pred ----cCCCCCCHHHHHHHHHHHHhCCCC---eEEEEe---CCHHHHhhh
Confidence 114567899999999988875432 344444 556655443
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.23 E-value=2.7e-06 Score=77.68 Aligned_cols=159 Identities=11% Similarity=0.057 Sum_probs=91.8
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|++||+|++... ++++.+++|+.|+.++++++... ...-.+||++||...+... .
T Consensus 134 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----------~ 203 (317)
T 3oec_A 134 GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA----------P 203 (317)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC----------T
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC----------C
Confidence 468999999985321 33456899999999999987432 1113679999998766421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce--
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL-- 153 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~-- 153 (309)
.... ..+|.+.+.+.+.++.+ ..+ +.++.|+|+.|+++...+.. ....+......+.
T Consensus 204 --------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~~~ 265 (317)
T 3oec_A 204 --------GQSHYAASKHGVQGLMLSLANEVGRHN---IRVNSVNPGAVNTEMALNEK-------LLKMFLPHLENPTRE 265 (317)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBSSHHHHCHH-------HHHHHCTTCSSCCHH
T ss_pred --------CCcchHHHHHHHHHHHHHHHHHHhhcC---eEEEEEecCcccCccccchh-------hhhhhhhhccccchh
Confidence 0000 02344444444444432 247 99999999999987421100 0000000000000
Q ss_pred ---eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 154 ---LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 154 ---~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
........ ....+.+++|+|+++++++..+ ...|++++|.+|..
T Consensus 266 ~~~~~~~~~~~--~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 266 DAAELFSQLTL--LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314 (317)
T ss_dssp HHHHHHTTTCS--SSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhhhcc--CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence 00000000 1145678999999999888543 34699999998864
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.22 E-value=4e-06 Score=73.83 Aligned_cols=145 Identities=9% Similarity=0.043 Sum_probs=86.8
Q ss_pred CCCccEEEEeeccc-C--C----Ch---HHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 10 LTDVTHIFYVTWAS-R--P----TE---AENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 10 ~~~vd~V~H~A~~~-~--~----~~---~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
...+|++||+|++. . + ++ ++.+++|+.|+.++++++ ++. +-.+||++||...+...
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~~g~iv~isS~~~~~~~-------- 159 (252)
T 3f1l_A 90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS--DAGSLVFTSSSVGRQGR-------- 159 (252)
T ss_dssp CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS--SSCEEEEECCGGGTSCC--------
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC--CCCEEEEECChhhccCC--------
Confidence 34689999999852 1 1 22 456899999999999998 333 45799999998665321
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.. ... ..+|.+.+.+.+..+.+ .++. +.+..+.|+.|..+- . ....
T Consensus 160 -~~---------~~~Y~asK~a~~~l~~~la~e-~~~~-irvn~v~PG~v~t~~----~------------~~~~----- 206 (252)
T 3f1l_A 160 -AN---------WGAYAASKFATEGMMQVLADE-YQQR-LRVNCINPGGTRTAM----R------------ASAF----- 206 (252)
T ss_dssp -TT---------CHHHHHHHHHHHHHHHHHHHH-TTTT-CEEEEEECCSBSSHH----H------------HHHC-----
T ss_pred -CC---------CchhHHHHHHHHHHHHHHHHH-hcCC-cEEEEEecCcccCch----h------------hhhC-----
Confidence 00 000 13345555555555554 2211 788888888775421 1 0100
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccHH
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKWK 203 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~~ 203 (309)
+.. ....+...+|+|+++++++..+ ...|+.++|.+|...++.
T Consensus 207 -~~~-----~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 207 -PTE-----DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp -TTC-----CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred -Ccc-----chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence 011 1123456788999998888643 356999999999877654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.22 E-value=5.6e-06 Score=73.87 Aligned_cols=159 Identities=11% Similarity=-0.024 Sum_probs=91.9
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..+|++||+|++... ++++.+++|+.|+.++++++... ...-.|||++||...+... .
T Consensus 100 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 169 (277)
T 3tsc_A 100 GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ----------P 169 (277)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------S
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC----------C
Confidence 468999999985322 33456899999999999885432 0013589999998766421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+....... ......... .......
T Consensus 170 --------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~-~~~~~~~ 233 (277)
T 3tsc_A 170 --------FMIHYTASKHAVTGLARAFAAELGKHS---IRVNSVHPGPVNTPMGSGDMV----TAVGQAMET-NPQLSHV 233 (277)
T ss_dssp --------SCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBSSGGGSHHHH----HHHHHHHHT-CGGGTTT
T ss_pred --------CchhhHHHHHHHHHHHHHHHHHhCccC---eEEEEEEeCCCcCCcccchhh----hhhhhcccc-cHHHHHH
Confidence 0000 12344444444444432 247 999999999998864321110 001111100 0000000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..... .. -+..++|+|+++++++..+ ...|++++|.+|..
T Consensus 234 ~~~~~---p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 275 (277)
T 3tsc_A 234 LTPFL---PD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275 (277)
T ss_dssp TCCSS---SC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hhhcc---CC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence 11111 12 3678999999999988643 35699999998753
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=4.4e-06 Score=74.85 Aligned_cols=158 Identities=8% Similarity=-0.071 Sum_probs=92.2
Q ss_pred CCccEEEEeecccCC----------ChHHHHHhHHHHHHHHHHHhCcCC---CCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP----------TEAENCEVNGAMLRNVLRSVIPNA---PNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~---~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|++||+|++... ++++.+++|+.|+.++++++...- ..-.+||++||...+... .
T Consensus 103 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~ 173 (286)
T 3uve_A 103 GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY---------P 173 (286)
T ss_dssp SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------T
T ss_pred CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCC---------C
Confidence 468999999985221 234478999999999999875430 013589999998766421 0
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. ... ..+|.+.+.+.+..+.+ ..+ +.+..|+|+.|..+...+... +.........+-+
T Consensus 174 ~---------~~~Y~asKaa~~~~~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~~ 234 (286)
T 3uve_A 174 H---------TGHYVAAKHGVVGLMRAFGVELGQHM---IRVNSVHPTHVKTPMLHNEGT-------FKMFRPDLENPGP 234 (286)
T ss_dssp T---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBSSTTTSSHHH-------HHHHCTTSSSCCH
T ss_pred C---------ccHHHHHHHHHHHHHHHHHHHhcccC---eEEEEEecCcccCCcccccch-------hhhccccccccch
Confidence 0 000 12344444444444332 257 999999999998875432110 0000000000000
Q ss_pred -----e--cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 155 -----F--PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 155 -----~--~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
+ .... ....+...+|+|+++++++..+ ...||+++|.+|...
T Consensus 235 ~~~~~~~~~~~~----~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 235 DDMAPICQMFHT----LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp HHHHHHHHTTCS----SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhHHHHHHhhhc----cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 0 0000 0134678999999999988643 356999999988654
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.22 E-value=6.5e-06 Score=72.78 Aligned_cols=152 Identities=7% Similarity=-0.057 Sum_probs=90.7
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+|||+|++... ++++.+++|+.|+.++++++ ++. +-.+||++||...+...
T Consensus 98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~isS~~~~~~~-------- 167 (267)
T 3gdg_A 98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER--GTGSLVITASMSGHIAN-------- 167 (267)
T ss_dssp HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCC--------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc--CCceEEEEccccccccC--------
Confidence 34578999999985321 23457899999999999988 333 34699999998665321
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.| +.... ..+|.+.+.+.+..+.+. +.. +.++.+.|+.|..+-........ ...+ . ...
T Consensus 168 ---~~-----~~~~~Y~~sK~a~~~~~~~la~e~-~~~-i~v~~v~PG~v~t~~~~~~~~~~-----~~~~-~-~~~--- 227 (267)
T 3gdg_A 168 ---FP-----QEQTSYNVAKAGCIHMARSLANEW-RDF-ARVNSISPGYIDTGLSDFVPKET-----QQLW-H-SMI--- 227 (267)
T ss_dssp ---SS-----SCCHHHHHHHHHHHHHHHHHHHHT-TTT-CEEEEEEECCEECSCGGGSCHHH-----HHHH-H-TTS---
T ss_pred ---CC-----CCCCcchHHHHHHHHHHHHHHHHh-ccC-cEEEEEECCccccchhhhCCHHH-----HHHH-H-hcC---
Confidence 00 00000 133444555555555432 211 78889999988665322111110 0011 0 111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
....+.+++|+|+++++++... ...|++++|.+|..
T Consensus 228 ---------~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 228 ---------PMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT 265 (267)
T ss_dssp ---------TTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred ---------CCCCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence 1234556889999999888643 35699999998764
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.22 E-value=6.2e-06 Score=73.36 Aligned_cols=154 Identities=6% Similarity=-0.091 Sum_probs=89.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
..+|++||+|++... ++++.+++|+.|+.++++++...-..-.|||++||...... ..|
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~- 162 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF-----------SVP- 162 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC-----------CCT-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC-----------CCC-
Confidence 468999999985321 33456899999999999998765211248999999753211 100
Q ss_pred CCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcch-------hHHHHHHHHHHHhHhCC
Q 045430 82 TEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMN-------VVGTLCVYAAICKHEGV 151 (309)
Q Consensus 82 ~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~-------~~~~~~i~~~l~~~~g~ 151 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+....... ....-.....+. ...
T Consensus 163 -----~~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 232 (270)
T 3is3_A 163 -----KHSLYSGSKGAVDSFVRIFSKDCGDKK---ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAA--HAS 232 (270)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHH--HHS
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHhcccC---eEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHH--hcC
Confidence 0000 02344444444444432 247 999999999998864211000 000000000000 011
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
....+..++|+|+++++++... ...|++++|.+|.
T Consensus 233 ------------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 233 ------------PLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp ------------TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred ------------CCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 1234567999999999888643 3569999998874
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.9e-06 Score=76.54 Aligned_cols=153 Identities=8% Similarity=-0.075 Sum_probs=91.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
.++|++||+|++... +++..+++|+.|+.++++++...-.+-.++|++||...+... ...
T Consensus 90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~---------~~~-- 158 (262)
T 3ksu_A 90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT---------GFY-- 158 (262)
T ss_dssp CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH---------CCC--
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC---------CCC--
Confidence 478999999984321 234467899999999999987641123689999998877532 010
Q ss_pred CCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 82 TEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 82 ~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
..+ ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+........ .........
T Consensus 159 ---~~Y---~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~---------------~~~~~~~~~ 214 (262)
T 3ksu_A 159 ---STY---AGNKAPVEHYTRAASKELMKQQ---ISVNAIAPGPMDTSFFYGQETK---------------ESTAFHKSQ 214 (262)
T ss_dssp ---CC--------CHHHHHHHHHHHHTTTTT---CEEEEEEECCCCTHHHHTCC--------------------------
T ss_pred ---chh---HHHHHHHHHHHHHHHHHHHHcC---cEEEEEeeCCCcCccccccCch---------------HHHHHHHhc
Confidence 000 13456666666655543 246 9999999998866421110000 000000010
Q ss_pred cccccceeccCHHHHHHHHHHHhcC-CCCCCcceeecCCCccc
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVD-PYARNEAFNCSNGDVFK 201 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~-~~a~g~~fNI~~g~~~s 201 (309)
. ....+...+|+|+++++++.. ....|+.++|.+|....
T Consensus 215 ~---~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~ 254 (262)
T 3ksu_A 215 A---MGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTTR 254 (262)
T ss_dssp ----CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC
T ss_pred C---cccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccCC
Confidence 0 123456788899999988864 22459999998876544
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.18 E-value=3.6e-06 Score=75.34 Aligned_cols=150 Identities=7% Similarity=-0.067 Sum_probs=89.7
Q ss_pred CCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|++... + ++..+++|+.|+.++++++... ...-.+||++||...+...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~----------- 176 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN----------- 176 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC-----------
Confidence 368999999985322 2 2345699999999999987543 1012679999998665321
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.| +.... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+......... ..+. ...|+
T Consensus 177 ~~-----~~~~~Y~asKaa~~~l~~~la~e~~~~g---Irvn~v~PG~v~T~~~~~~~~~~------~~~~--~~~p~-- 238 (276)
T 3r1i_A 177 IP-----QQVSHYCTSKAAVVHLTKAMAVELAPHQ---IRVNSVSPGYIRTELVEPLADYH------ALWE--PKIPL-- 238 (276)
T ss_dssp CS-----SCCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCSTTTGGGGGGH------HHHG--GGSTT--
T ss_pred CC-----CCcchHHHHHHHHHHHHHHHHHHHhhcC---cEEEEEeeCCCcCCccccchHHH------HHHH--hcCCC--
Confidence 00 00000 02344444444444432 257 99999999999887543221110 0110 11121
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..+..++|+|+++++++..+ ...||+++|.+|..
T Consensus 239 ----------~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 239 ----------GRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp ----------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred ----------CCCcCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence 23456788999999888643 35699999988753
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.18 E-value=6.1e-06 Score=74.36 Aligned_cols=148 Identities=7% Similarity=-0.049 Sum_probs=89.5
Q ss_pred CCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.++|+|||+|++.. + ++++.+++|+.|+.++++++. +. +-.+||++||...+...
T Consensus 114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~g~IV~isS~~~~~~~--------- 182 (287)
T 3rku_A 114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK--NSGDIVNLGSIAGRDAY--------- 182 (287)
T ss_dssp CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCC---------
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEECChhhcCCC---------
Confidence 47999999998432 1 335578999999999999983 33 35799999998665321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
.. ... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|..+-......... . ...+..
T Consensus 183 ~~---------~~~Y~asKaa~~~l~~~la~e~~~~g---Irvn~v~PG~v~T~~~~~~~~~~~--~---~~~~~~---- 241 (287)
T 3rku_A 183 PT---------GSIYCASKFAVGAFTDSLRKELINTK---IRVILIAPGLVETEFSLVRYRGNE--E---QAKNVY---- 241 (287)
T ss_dssp TT---------CHHHHHHHHHHHHHHHHHHHHTTTSS---CEEEEEEESCEESSHHHHHTTTCH--H---HHHHHH----
T ss_pred CC---------CchHHHHHHHHHHHHHHHHHHhhhcC---CEEEEEeCCcCcCccccccccCcH--H---HHHHhh----
Confidence 00 000 12344445555544443 246 999999999998752100000000 0 000000
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCcc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDVF 200 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~~ 200 (309)
.. .....++|+|+++++++..+. ..||++++.+|+..
T Consensus 242 --~~--------~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~~ 280 (287)
T 3rku_A 242 --KD--------TTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQAS 280 (287)
T ss_dssp --TT--------SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEEE
T ss_pred --cc--------cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCCC
Confidence 00 112268999999999887643 34899999988753
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=8.8e-06 Score=72.15 Aligned_cols=156 Identities=8% Similarity=-0.004 Sum_probs=90.0
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..+|++||+|++... +++..+++|+.|+.++++++... ..+-.+||++||...+... .
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 154 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE----------P- 154 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC----------T-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC----------C-
Confidence 468999999985321 23457899999999999987432 1134689999998665321 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh----HHHHHHHH-HHHhHhCC
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV----VGTLCVYA-AICKHEGV 151 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~----~~~~~i~~-~l~~~~g~ 151 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+..|+|+.|.++........ ......+. .+.+....
T Consensus 155 -------~~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
T 3lf2_A 155 -------HMVATSAARAGVKNLVRSMAFEFAPKG---VRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQI 224 (265)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTC
T ss_pred -------CchhhHHHHHHHHHHHHHHHHHhcccC---eEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCC
Confidence 0000 02344444444443332 247 9999999999987632110000 00000000 11110011
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
| ...+..++|+|+++++++... ...|++++|.+|..
T Consensus 225 p------------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 225 P------------LGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp T------------TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred C------------cCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 1 123567899999999888642 35699999998753
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.17 E-value=6.5e-06 Score=73.27 Aligned_cols=136 Identities=11% Similarity=-0.094 Sum_probs=81.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++. +. +..+||++||...+...
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~IV~isS~~~~~~~---------- 153 (266)
T 3p19_A 86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR--NCGTIINISSIAGKKTF---------- 153 (266)
T ss_dssp CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCC----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEcChhhCCCC----------
Confidence 478999999985311 234468999999999777764 33 45799999998766421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+.+.++.+ ..+ +.++.++|+.|.++.......... . ..... . ..+
T Consensus 154 ~--------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~~~-~---~~~~~-~--~~~ 215 (266)
T 3p19_A 154 P--------DHAAYCGTKFAVHAISENVREEVAASN---VRVMTIAPSAVKTELLSHTTSQQI-K---DGYDA-W--RVD 215 (266)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBSSSGGGGCSCHHH-H---HHHHH-H--HHH
T ss_pred C--------CCchHHHHHHHHHHHHHHHHHHhcccC---cEEEEEeeCccccchhhcccchhh-h---HHHHh-h--ccc
Confidence 0 0000 12344444444433332 257 999999999998875322211100 0 00000 0 011
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPY 186 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~ 186 (309)
...+.+++|+|+++++++..+.
T Consensus 216 ----------~~r~~~pedvA~av~~l~~~~~ 237 (266)
T 3p19_A 216 ----------MGGVLAADDVARAVLFAYQQPQ 237 (266)
T ss_dssp ----------TTCCBCHHHHHHHHHHHHHSCT
T ss_pred ----------ccCCCCHHHHHHHHHHHHcCCC
Confidence 1245679999999999998754
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.6e-06 Score=76.30 Aligned_cols=148 Identities=10% Similarity=0.013 Sum_probs=89.2
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|++||+|++... ++++.+++|+.|+.+++++ +++.. ...|||++||...+... .
T Consensus 79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---------~ 148 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG-KAGRVISIASNTFFAGT---------P 148 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCTHHHHTC---------T
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCcEEEEECchhhccCC---------C
Confidence 368999999985321 3345789999999999988 44432 25799999998766421 0
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. ... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+.......... . .+... ..++
T Consensus 149 ~---------~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~PG~v~t~~~~~~~~~~~-~----~~~~~-~~~~- 209 (247)
T 3rwb_A 149 N---------MAAYVAAKGGVIGFTRALATELGKYN---ITANAVTPGLIESDGVKASPHNEA-F----GFVEM-LQAM- 209 (247)
T ss_dssp T---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHTSGGGGG-H----HHHHH-HSSS-
T ss_pred C---------chhhHHHHHHHHHHHHHHHHHhhhcC---eEEEEEeeCcCcCccccccChhHH-H----HHHhc-cccc-
Confidence 0 000 12344444444443332 257 999999999998864311111000 0 00000 0111
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..+...+|+|+++++++..+ ...|++++|.+|-
T Consensus 210 -----------~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 210 -----------KGKGQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp -----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred -----------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 23456889999999888643 3469999998874
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.6e-05 Score=70.43 Aligned_cols=157 Identities=8% Similarity=0.031 Sum_probs=92.2
Q ss_pred CCccEEEEeecccCC----------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP----------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|++||+|++... +++..+++|+.|+.++++++... ..+-.+||++||...+... .
T Consensus 116 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------~ 186 (299)
T 3t7c_A 116 GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA---------E 186 (299)
T ss_dssp SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC---------T
T ss_pred CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC---------C
Confidence 468999999984211 23457899999999999986432 1124689999998766421 0
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHH--------HHHHHHHH
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGT--------LCVYAAIC 146 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~--------~~i~~~l~ 146 (309)
. ... ..+|.+.+.+.+..+.+ ..+ +.+..|+|+.|..+...+....... ...+....
T Consensus 187 ~---------~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (299)
T 3t7c_A 187 N---------IGNYIASKHGLHGLMRTMALELGPRN---IRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS 254 (299)
T ss_dssp T---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH
T ss_pred C---------cchHHHHHHHHHHHHHHHHHHhcccC---cEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHh
Confidence 0 000 02344444444443332 247 9999999999998754321100000 00000000
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
+.. .. .+ ..+..++|+|+++++++..+ ...|++++|.+|...
T Consensus 255 ~~~-~~--~p---------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 255 RQM-HV--LP---------IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp HHH-SS--SS---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhh-cc--cC---------cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 000 00 11 23568999999999988643 356999999988654
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.16 E-value=3.2e-05 Score=67.61 Aligned_cols=157 Identities=13% Similarity=0.044 Sum_probs=90.1
Q ss_pred ccCCCCccEEEEeeccc-C----C-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccC
Q 045430 7 LSKLTDVTHIFYVTWAS-R----P-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~-~----~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
.+...++|+|||+|++. . + +++..+++|+.|+.++++++... ..+..|||++||...+...
T Consensus 67 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----- 141 (244)
T 1zmo_A 67 LQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL----- 141 (244)
T ss_dssp GGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----
T ss_pred HHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC-----
Confidence 33455799999999842 2 1 23447899999999999887521 0135799999998766421
Q ss_pred CCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 73 KIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|-.+-... ......-.....+.+ .
T Consensus 142 -------~------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~-~ 203 (244)
T 1zmo_A 142 -------A------YNPLYGPARAATVALVESAAKTLSRDG---ILLYAIGPNFFNNPTYFP-TSDWENNPELRERVD-R 203 (244)
T ss_dssp -------T------TCTTHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBCBTTTBC-HHHHHHCHHHHHHHH-H
T ss_pred -------C------CchHHHHHHHHHHHHHHHHHHHHhhcC---cEEEEEeeCCCcCCcccc-cccccchHHHHHHHh-c
Confidence 0 0011 12344445444444332 247 999999999886543100 011000000111110 0
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~ 198 (309)
..|+ .-+...+|+|+++++++..+. ..|+.+.|.+|.
T Consensus 204 ~~p~------------~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~ 242 (244)
T 1zmo_A 204 DVPL------------GRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY 242 (244)
T ss_dssp HCTT------------CSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred CCCC------------CCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence 1111 124568899999998886532 458999988763
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.6e-06 Score=75.48 Aligned_cols=141 Identities=8% Similarity=-0.093 Sum_probs=85.9
Q ss_pred CCccEEEEeecccC------C----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR------P----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~------~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.++|+|||+|+... . +++..+++|+.|+.++++++...-..-.|||++||...|...
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------- 137 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT------------- 137 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-------------
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC-------------
Confidence 47899999998431 1 234567999999999999886531012489999998666311
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh----cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
+.... ..+|.+.+.+.+.++.+ ..+ +.++++||+.|.++.. . .....
T Consensus 138 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~g---i~v~~v~Pg~v~t~~~----~------------~~~~~---- 189 (236)
T 1ooe_A 138 -----PSMIGYGMAKAAVHHLTSSLAAKDSGLPDN---SAVLTIMPVTLDTPMN----R------------KWMPN---- 189 (236)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHSTTSSCCTT---CEEEEEEESCBCCHHH----H------------HHSTT----
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHhcccCCC---eEEEEEecCcccCcch----h------------hcCCC----
Confidence 00000 12344445555555443 235 9999999999987521 0 00000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC---CCCCcceeecCCCc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP---YARNEAFNCSNGDV 199 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~~g~~ 199 (309)
. .....+..+|+|++++..+..+ ...|+.++|.+|..
T Consensus 190 --~-----~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~ 229 (236)
T 1ooe_A 190 --A-----DHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTENG 229 (236)
T ss_dssp --C-----CGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred --c-----cccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCCC
Confidence 0 0123456799999987445222 34599999987654
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.2e-05 Score=72.42 Aligned_cols=152 Identities=7% Similarity=-0.092 Sum_probs=91.4
Q ss_pred CCccEEEEeecccC----C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR----P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~----~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|++||+|++.. + ++++.+++|+.|+.++++++...-..-.|||++||...+... ...
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~---------~~~ 188 (297)
T 1d7o_A 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII---------PGY 188 (297)
T ss_dssp SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC---------TTC
T ss_pred CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCC---------CCc
Confidence 46899999998421 1 234578999999999999997641001589999998655321 000
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh---cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK---RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~---~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|.++...... ... .....+.+ ..|+
T Consensus 189 --------~~~Y~asKaa~~~~~~~la~e~~~~~g---i~vn~v~PG~v~T~~~~~~~-~~~--~~~~~~~~--~~p~-- 250 (297)
T 1d7o_A 189 --------GGGMSSAKAALESDTRVLAFEAGRKQN---IRVNTISAGPLGSRAAKAIG-FID--TMIEYSYN--NAPI-- 250 (297)
T ss_dssp --------TTTHHHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCCBCCCSSCCS-HHH--HHHHHHHH--HSSS--
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhCcccC---cEEEEEeccccccchhhhcc-ccH--HHHHHhhc--cCCC--
Confidence 001 12344444444444332 147 99999999999998643321 000 01111111 1222
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..+..++|+|+++++++... ...|+.++|.+|..
T Consensus 251 ----------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~ 286 (297)
T 1d7o_A 251 ----------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286 (297)
T ss_dssp ----------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred ----------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence 12346889999998887542 34699999998853
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.13 E-value=1.4e-05 Score=73.46 Aligned_cols=149 Identities=11% Similarity=0.010 Sum_probs=90.6
Q ss_pred CCccEEEEeecccCC------C--------------h---HHHHHhHHHHHHHHHHHhCcC--CCC------CceEEEEe
Q 045430 11 TDVTHIFYVTWASRP------T--------------E---AENCEVNGAMLRNVLRSVIPN--APN------LRHVCLQT 59 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~--------------~---~~~~~vNv~gt~nll~a~~~~--~~~------v~r~v~~S 59 (309)
.++|+|||+|++... + . +..+++|+.|+.++++++... ..+ ..+||++|
T Consensus 141 g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~is 220 (328)
T 2qhx_A 141 GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220 (328)
T ss_dssp SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEEC
Confidence 368999999985321 2 2 235799999999999887532 002 47999999
Q ss_pred CCccccCCccccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH
Q 045430 60 GGKHYVGPFESFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV 136 (309)
Q Consensus 60 s~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~ 136 (309)
|...+... +.... ..+|.+.+.+.+..+.+ ..+ +.+++|+|+.|..+. ... ..
T Consensus 221 S~~~~~~~------------------~~~~~Y~asKaal~~l~~~la~el~~~g---Irvn~v~PG~v~T~~-~~~-~~- 276 (328)
T 2qhx_A 221 DAMTNQPL------------------LGYTIYTMAKGALEGLTRSAALELAPLQ---IRVNGVGPGLSVLVD-DMP-PA- 276 (328)
T ss_dssp CTTTTSCC------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBSCCC-CSC-HH-
T ss_pred chhhccCC------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcC---cEEEEEecCcccCCc-ccc-HH-
Confidence 98666421 00000 12344444444444332 247 999999999999876 322 21
Q ss_pred HHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcc
Q 045430 137 GTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVF 200 (309)
Q Consensus 137 ~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~ 200 (309)
....+. ...|+ +. -+..++|+|+++++++.. ....|+.++|.+|...
T Consensus 277 ----~~~~~~--~~~p~---~~--------r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 325 (328)
T 2qhx_A 277 ----VWEGHR--SKVPL---YQ--------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325 (328)
T ss_dssp ----HHHHHH--TTCTT---TT--------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ----HHHHHH--hhCCC---CC--------CCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence 111111 11221 10 244689999999998864 2356999999988643
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.11 E-value=3.6e-06 Score=75.02 Aligned_cols=156 Identities=7% Similarity=-0.056 Sum_probs=91.9
Q ss_pred CCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccc-cCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHY-VGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vY-G~~~~~~~~~~~~~ 78 (309)
.++|+|||+|+... + ++++.+++|+.|+.++++++...- .+..|||++||...+ |.+ .
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~ 150 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------Q 150 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----------T
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC----------C
Confidence 46899999998532 1 234578999999999999986420 013799999997544 311 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh-HHHHHHHHHHHhHhCCcee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV-VGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~-~~~~~i~~~l~~~~g~~~~ 154 (309)
... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|+++........ ......+... ....|+
T Consensus 151 ---------~~~Y~asKaa~~~~~~~la~e~~~~g---i~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~p~- 215 (270)
T 1yde_A 151 ---------AVPYVATKGAVTAMTKALALDESPYG---VRVNCISPGNIWTPLWEELAALMPDPRASIREG--MLAQPL- 215 (270)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHH--HHTSTT-
T ss_pred ---------CcccHHHHHHHHHHHHHHHHHhhhhC---cEEEEEEeCccccchhhhhhhcccchHHHHHHH--hhcCCC-
Confidence 000 13344455555444432 257 9999999999999742110000 0000000000 011121
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcC-CCCCCcceeecCCCcccH
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVD-PYARNEAFNCSNGDVFKW 202 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~-~~a~g~~fNI~~g~~~s~ 202 (309)
.-+...+|+|+++++++.. ....|+.++|.+|.....
T Consensus 216 -----------~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~ 253 (270)
T 1yde_A 216 -----------GRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGY 253 (270)
T ss_dssp -----------SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC
T ss_pred -----------CCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeeccc
Confidence 1245688999998887753 235699999999876654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.11 E-value=8e-06 Score=72.64 Aligned_cols=126 Identities=10% Similarity=0.024 Sum_probs=78.4
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+|||+|+.... ++++.+++|+.|+.++++++... ..+.+|||++||..+|... .
T Consensus 106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~ 175 (272)
T 1yb1_A 106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV----------P 175 (272)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH----------H
T ss_pred CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC----------C
Confidence 3478999999985322 23457899999988877766421 0146899999998776421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh-----cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK-----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~-----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
.... ..+|.+.+.+++.++.+ ..+ +.++++||+.|.++.....
T Consensus 176 --------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~g---i~v~~v~Pg~v~t~~~~~~-------------------- 224 (272)
T 1yb1_A 176 --------FLLAYCSSKFAAVGFHKTLTDELAALQITG---VKTTCLCPNFVNTGFIKNP-------------------- 224 (272)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTT---EEEEEEEETHHHHCSTTCT--------------------
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHHHHhCCCC---eEEEEEeCCcccCCccccc--------------------
Confidence 0000 12344445455444432 136 9999999999988642110
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
. . ....+.+++|+|++++.++..+
T Consensus 225 ~------~---~~~~~~~~~dva~~i~~~~~~~ 248 (272)
T 1yb1_A 225 S------T---SLGPTLEPEEVVNRLMHGILTE 248 (272)
T ss_dssp H------H---HHCCCCCHHHHHHHHHHHHHTT
T ss_pred c------c---cccCCCCHHHHHHHHHHHHHcC
Confidence 0 0 1124567899999999988754
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.10 E-value=1.6e-05 Score=72.57 Aligned_cols=95 Identities=12% Similarity=-0.013 Sum_probs=60.4
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--------CCCceEEEEeCCccccCCccccC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--------PNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--------~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
..++|+|||+|++... ++++.+++|+.|+.++++++.... .+-.|||++||...+...
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~----- 159 (319)
T 3ioy_A 85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA----- 159 (319)
T ss_dssp TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC-----
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC-----
Confidence 3578999999985321 345578999999999999876541 013479999998777521
Q ss_pred CCCCCCCCCCCCCCCCCcccchHHHHHH-----HHHHHHh--cCCCcceeEEeecCCceecccC
Q 045430 73 KIRPHDTPFTEDLPRLNVTNFYYTQEDI-----LFEEVEK--RKGPLSLTWSVHRPHIIFGFSP 129 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~p~~~y~~e~~-----~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~ 129 (309)
|. .+-|..+|. ....+.+ ..+ +.+++|+|+.|.++-.
T Consensus 160 ----------------~~-~~~Y~aSKaal~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~ 203 (319)
T 3ioy_A 160 ----------------GS-PGIYNTTKFAVRGLSESLHYSLLKYE---IGVSVLCPGLVKSYIY 203 (319)
T ss_dssp ----------------SS-SHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEECCCCBC----
T ss_pred ----------------CC-CHHHHHHHHHHHHHHHHHHHHhhhcC---CEEEEEEcCeEccCcc
Confidence 01 123555444 2222211 247 9999999999988743
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.8e-05 Score=69.74 Aligned_cols=136 Identities=7% Similarity=-0.024 Sum_probs=83.6
Q ss_pred CccEEEEeecccC-C---------ChHHHHHhHHHHHHHHHHHhCcCC-------------CCCceEEEEeCCccccCCc
Q 045430 12 DVTHIFYVTWASR-P---------TEAENCEVNGAMLRNVLRSVIPNA-------------PNLRHVCLQTGGKHYVGPF 68 (309)
Q Consensus 12 ~vd~V~H~A~~~~-~---------~~~~~~~vNv~gt~nll~a~~~~~-------------~~v~r~v~~Ss~~vYG~~~ 68 (309)
++|+|||+|+... . ++++.+++|+.|+.++++++...- .+-.|||++||...|...
T Consensus 102 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~- 180 (267)
T 1sny_A 102 GLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG- 180 (267)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT-
T ss_pred CccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC-
Confidence 5899999998533 1 234478999999999999985430 013689999998877531
Q ss_pred cccCCCCCCCCCCCCCCCCCCc-c--cchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHH
Q 045430 69 ESFGKIRPHDTPFTEDLPRLNV-T--NFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYA 143 (309)
Q Consensus 69 ~~~~~~~~~~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~ 143 (309)
. +..+. + .+|.+.+.+++.++.+ ..+ +.++++||+.|..+-..
T Consensus 181 ---------~-------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~------------- 228 (267)
T 1sny_A 181 ---------N-------TDGGMYAYRTSKSALNAATKSLSVDLYPQR---IMCVSLHPGWVKTDMGG------------- 228 (267)
T ss_dssp ---------C-------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEECCCSBCSTTTC-------------
T ss_pred ---------C-------CCCCchHHHHHHHHHHHHHHHHHHHhhcCC---cEEEEeCCcceecCCCC-------------
Confidence 1 00011 1 2344445555444432 247 99999999988653210
Q ss_pred HHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcccH
Q 045430 144 AICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFKW 202 (309)
Q Consensus 144 ~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s~ 202 (309)
. . .....+++|+.++.++..+ ...|+.|++ ||..+.|
T Consensus 229 --------~-----~--------~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~-~g~~~~w 267 (267)
T 1sny_A 229 --------S-----S--------APLDVPTSTGQIVQTISKLGEKQNGGFVNY-DGTPLAW 267 (267)
T ss_dssp --------T-----T--------CSBCHHHHHHHHHHHHHHCCGGGTTCEECT-TSCBCCC
T ss_pred --------C-----C--------CCCCHHHHHHHHHHHHHhcCcCCCCcEEcc-CCcCcCC
Confidence 0 0 1245678999988888643 234665554 5555544
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.09 E-value=6.5e-06 Score=74.54 Aligned_cols=145 Identities=12% Similarity=-0.031 Sum_probs=77.0
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++... ...-.+||++||...+... .
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 176 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN----------A 176 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC----------T
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----------C
Confidence 468999999985321 33457899999999999997432 1114689999998666321 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+.+.++.+ ..+ +.++.++|+.|..+-. ........ ........+...
T Consensus 177 --------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~----~~~~~~~~--~~~~~~~~~~~~ 239 (301)
T 3tjr_A 177 --------GLGTYGVAKYGVVGLAETLAREVKPNG---IGVSVLCPMVVETKLV----SNSERIRG--ADYGMSATPEGA 239 (301)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEECCSCCCSSHH----HHHHHHC---------------
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHhcccC---cEEEEEECCccccccc----cccccccc--hhhccccChhhh
Confidence 0000 02233333343333321 247 9999999999876421 11000000 000000112222
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
.+... ....+++++|+|++++.++..+
T Consensus 240 ~~~~~---~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 240 FGPLP---TQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp ------------CCCHHHHHHHHHHHHHHT
T ss_pred ccccc---cccCCCCHHHHHHHHHHHHhcC
Confidence 22222 3457889999999999888754
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=6.2e-06 Score=75.52 Aligned_cols=137 Identities=11% Similarity=0.074 Sum_probs=84.5
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCcc-ccCCccccCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKH-YVGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~v-YG~~~~~~~~~ 74 (309)
...++|+|||+|++... +++..+++|+.|+.++++++. +. +..|||++||... ||.+
T Consensus 89 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~grIV~vsS~~~~~~~~------- 159 (319)
T 1gz6_A 89 TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ--NYGRIIMTASASGIYGNF------- 159 (319)
T ss_dssp HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCEEEEEECCHHHHHCCT-------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEECChhhccCCC-------
Confidence 34578999999985321 234578999999999888873 33 3579999999744 4421
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
. ... ..+|.+.+.+.+..+.+ ..+ +.+++|+|+.| . ++... .
T Consensus 160 ---~---------~~~Y~aSK~a~~~~~~~la~el~~~g---I~vn~v~PG~~-t----~~~~~-------------~-- 204 (319)
T 1gz6_A 160 ---G---------QANYSAAKLGLLGLANTLVIEGRKNN---IHCNTIAPNAG-S----RMTET-------------V-- 204 (319)
T ss_dssp ---T---------CHHHHHHHHHHHHHHHHHHHHTGGGT---EEEEEEEEECC-S----TTTGG-------------G--
T ss_pred ---C---------CHHHHHHHHHHHHHHHHHHHHhcccC---EEEEEEeCCCc-c----ccccc-------------c--
Confidence 0 000 12344444444444432 247 99999999876 2 11110 0
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCC-CCCcceeecCCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY-ARNEAFNCSNGD 198 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~-a~g~~fNI~~g~ 198 (309)
+ + . ....+..++|+|+++++++..+. ..|+.|++.+|.
T Consensus 205 -~--~---~---~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~ 243 (319)
T 1gz6_A 205 -M--P---E---DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGW 243 (319)
T ss_dssp -S--C---H---HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTE
T ss_pred -C--C---h---hhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCCe
Confidence 0 0 0 11234567889999998886543 468999998764
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.5e-05 Score=71.22 Aligned_cols=136 Identities=11% Similarity=-0.078 Sum_probs=75.0
Q ss_pred CCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhCcC----CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVIPN----APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~----~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.++|+|||+|++.. + ++++.+++|+.|+.++++++... ..+-.+||++||...+...
T Consensus 101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~--------- 171 (272)
T 4dyv_A 101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR--------- 171 (272)
T ss_dssp SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC---------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC---------
Confidence 46899999998532 1 23457899999988888876432 1113589999998666321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+-...... +.+.
T Consensus 172 -~--------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~---------------~~~~ 224 (272)
T 4dyv_A 172 -P--------YSAPYTATKHAITGLTKSTSLDGRVHD---IACGQIDIGNADTPMAQKMKA---------------GVPQ 224 (272)
T ss_dssp -T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEEEECC----------------------------
T ss_pred -C--------CchHHHHHHHHHHHHHHHHHHHhCccC---EEEEEEEECcccChhhhhhcc---------------cchh
Confidence 0 0000 12344445554444432 247 999999999998764321110 0000
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYA 187 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a 187 (309)
.. .. .....+..++|+|+++++++..+..
T Consensus 225 ~~-~~----~~~~~~~~pedvA~~v~fL~s~~~~ 253 (272)
T 4dyv_A 225 AD-LS----IKVEPVMDVAHVASAVVYMASLPLD 253 (272)
T ss_dssp ----------------CHHHHHHHHHHHHHSCTT
T ss_pred hh-hc----ccccCCCCHHHHHHHHHHHhCCCCc
Confidence 00 00 0123467899999999999987643
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.99 E-value=5.2e-06 Score=74.06 Aligned_cols=133 Identities=13% Similarity=0.065 Sum_probs=78.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHH----HHHHHHHhCcCCCCC--ceEEEEeCCccccCCccccCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAM----LRNVLRSVIPNAPNL--RHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~g----t~nll~a~~~~~~~v--~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
.++|+|||+|+.... ++++.+++|+.| ++++++++++. +. .|||++||...|+..
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~--~~~~g~iv~isS~~~~~~~-------- 179 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER--NVDDGHIININSMSGHRVL-------- 179 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCCSCEEEEECCGGGTSCC--------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCCceEEEEcChhhcccC--------
Confidence 368999999984321 235578999999 88888888775 44 799999998776421
Q ss_pred CCCCCCCCCCCCCCc-c--cchHHHHHHHHHHHHh----cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhH
Q 045430 76 PHDTPFTEDLPRLNV-T--NFYYTQEDILFEEVEK----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH 148 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~ 148 (309)
|. .+. + .+|.+.+.+++.++.+ ..+ +.+++|||+.|.++.......
T Consensus 180 ----~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~---i~v~~v~Pg~v~t~~~~~~~~-------------- 232 (279)
T 1xg5_A 180 ----PL------SVTHFYSATKYAVTALTEGLRQELREAQTH---IRATCISPGVVETQFAFKLHD-------------- 232 (279)
T ss_dssp ----SC------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCC---CEEEEEEESCBCSSHHHHHTT--------------
T ss_pred ----CC------CCCchhHHHHHHHHHHHHHHHHHHhhcCCC---eEEEEEecCcccchhhhhhcc--------------
Confidence 10 011 1 2334444444333321 246 999999999997753100000
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
..+-...... ....+.+++|+|+++++++..+
T Consensus 233 -~~~~~~~~~~----~~~~~~~~~dvA~~i~~l~~~~ 264 (279)
T 1xg5_A 233 -KDPEKAAATY----EQMKCLKPEDVAEAVIYVLSTP 264 (279)
T ss_dssp -TCHHHHHHHH----C---CBCHHHHHHHHHHHHHSC
T ss_pred -cChhHHhhhc----ccccCCCHHHHHHHHHHHhcCC
Confidence 0000000000 1123568999999999988754
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=97.98 E-value=3.2e-05 Score=69.28 Aligned_cols=144 Identities=13% Similarity=-0.004 Sum_probs=88.7
Q ss_pred CCccEEEEeecccC----------------C---ChHHHHHhHHHHHHHHHHHhCcCCC--C------CceEEEEeCCcc
Q 045430 11 TDVTHIFYVTWASR----------------P---TEAENCEVNGAMLRNVLRSVIPNAP--N------LRHVCLQTGGKH 63 (309)
Q Consensus 11 ~~vd~V~H~A~~~~----------------~---~~~~~~~vNv~gt~nll~a~~~~~~--~------v~r~v~~Ss~~v 63 (309)
.++|+|||+|++.. . +++..+++|+.|+.++++++..... + ..|||++||...
T Consensus 105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 184 (288)
T 2x9g_A 105 GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV 184 (288)
T ss_dssp SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTT
T ss_pred CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccc
Confidence 46899999998531 1 1234679999999999888754310 1 469999999866
Q ss_pred ccCCccccCCCCCCCCCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH
Q 045430 64 YVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV 136 (309)
Q Consensus 64 YG~~~~~~~~~~~~~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~ 136 (309)
+... | +...|...| +.+..+.+ ..+ +.+++|+|+.|+++. .. ...
T Consensus 185 ~~~~---------------------~-~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~t~~-~~-~~~- 236 (288)
T 2x9g_A 185 DQPC---------------------M-AFSLYNMGKHALVGLTQSAALELAPYG---IRVNGVAPGVSLLPV-AM-GEE- 236 (288)
T ss_dssp TSCC---------------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSCSCCT-TS-CHH-
T ss_pred cCCC---------------------C-CCchHHHHHHHHHHHHHHHHHHhhccC---eEEEEEEeccccCcc-cc-ChH-
Confidence 6421 0 112355444 44443332 247 999999999999986 21 111
Q ss_pred HHHHHHHHHHhHhCCceeecCCccccccceec-cCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 137 GTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA-SDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 137 ~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~-~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
....+. ...|+ | -+ ...+|+|+++++++..+ ...|+.++|.+|...
T Consensus 237 ----~~~~~~--~~~p~---~---------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 285 (288)
T 2x9g_A 237 ----EKDKWR--RKVPL---G---------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285 (288)
T ss_dssp ----HHHHHH--HTCTT---T---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ----HHHHHH--hhCCC---C---------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence 011111 11221 1 12 56889999999988642 356999999887543
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.6e-05 Score=68.77 Aligned_cols=129 Identities=7% Similarity=-0.143 Sum_probs=73.1
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHH----hCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRS----VIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a----~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|+.... ++++.+++|+.|+.+++++ +++. +.+|||++||...|...
T Consensus 77 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~~~iv~isS~~~~~~~---------- 144 (234)
T 2ehd_A 77 GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR--GGGTIVNVGSLAGKNPF---------- 144 (234)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT--TCEEEEEECCTTTTSCC----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCcEEEEECCchhcCCC----------
Confidence 368999999985321 2345789999999755554 4444 57899999998766421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. .... ..+|.+.+.+.+..+.+ ..+ +.++++||+.|..+-... .+
T Consensus 145 ~--------~~~~Y~~sK~a~~~~~~~la~e~~~~g---i~v~~v~Pg~v~t~~~~~-------------------~~-- 192 (234)
T 2ehd_A 145 K--------GGAAYNASKFGLLGLAGAAMLDLREAN---VRVVNVLPGSVDTGFAGN-------------------TP-- 192 (234)
T ss_dssp T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEECC--------------------------------
T ss_pred C--------CCchhhHHHHHHHHHHHHHHHHHhhcC---cEEEEEEeCCCcCCcccc-------------------cc--
Confidence 0 0000 12344444444443321 257 999999999886542110 00
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcce
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAF 192 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~f 192 (309)
.. + ..+..+|+|+++++++..+. ..|++.
T Consensus 193 --~~---~----~~~~~~dvA~~~~~l~~~~~~~~~g~~~ 223 (234)
T 2ehd_A 193 --GQ---A----WKLKPEDVAQAVLFALEMPGHAMVSEIE 223 (234)
T ss_dssp --------------CCHHHHHHHHHHHHHSCCSSCCCEEE
T ss_pred --cc---c----CCCCHHHHHHHHHHHhCCCcccccceEE
Confidence 00 0 14688999999999887543 235543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=4.9e-05 Score=65.71 Aligned_cols=141 Identities=15% Similarity=-0.044 Sum_probs=84.8
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.++|++||+|++... +++..+++|+.|+.++++++...- .+-.++|++||+..+... |
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~------------~ 146 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI------------P 146 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC------------T
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC------------C
Confidence 368999999985321 334578999999999999985420 012467777776443211 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCc
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSK 159 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~ 159 (309)
..+. ..+|.+.+.+.+.+..+..+ +.++.++|+.|-.+-.... .+.
T Consensus 147 ------~~~~Y~~sKaa~~~~~~~l~~~~~~---i~v~~v~PG~v~T~~~~~~-----------------------~~~- 193 (235)
T 3l77_A 147 ------YGGGYVSTKWAARALVRTFQIENPD---VRFFELRPGAVDTYFGGSK-----------------------PGK- 193 (235)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHCTT---SEEEEEEECSBSSSTTTCC-----------------------SCC-
T ss_pred ------CcchHHHHHHHHHHHHHHHhhcCCC---eEEEEEeCCcccccccccc-----------------------CCc-
Confidence 0001 13344555555555433357 9999999998855321110 011
Q ss_pred cccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCc
Q 045430 160 DCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDV 199 (309)
Q Consensus 160 ~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~ 199 (309)
. ....+...+|+|+++++++..+. ..|+......++.
T Consensus 194 ~---~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~~~ 232 (235)
T 3l77_A 194 P---KEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSVYQR 232 (235)
T ss_dssp C---GGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCTTSC
T ss_pred c---cccCCCCHHHHHHHHHHHHcCCCCCccceEEEeecccC
Confidence 0 11245679999999999987653 3467666665554
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.2e-05 Score=71.90 Aligned_cols=149 Identities=11% Similarity=0.044 Sum_probs=87.1
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|++||+|+.... +++..+++|+.|+.++++++... ..+-.|||++||...+... .
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------~- 176 (275)
T 4imr_A 108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK----------S- 176 (275)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC----------C-
Confidence 468999999985321 23446899999999999997321 0135799999998665421 0
Q ss_pred CCCCCCCCCCc-c--cchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 80 PFTEDLPRLNV-T--NFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 80 p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
+. + .+|.+.+.+.+..+.+ ..+ +.++.++|+.|..+......... -..+..+.+.. .|+
T Consensus 177 ---------~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~-~p~- 240 (275)
T 4imr_A 177 ---------VVTAYAATKAAQHNLIQSQARDFAGDN---VLLNTLAPGLVDTDRNADRRAQD--PEGWDEYVRTL-NWM- 240 (275)
T ss_dssp ---------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBCSHHHHHHHHHC--HHHHHHHHHHH-STT-
T ss_pred ---------CchhhHHHHHHHHHHHHHHHHHhcccC---cEEEEEEeccccCcccccccccC--hHHHHHHHhhc-Ccc-
Confidence 11 1 2344444444444432 247 99999999999776321100000 00111111100 011
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
.-+...+|+|+++++++..+ ...|++++|.+|
T Consensus 241 -----------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 241 -----------GRAGRPEEMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp -----------CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred -----------CCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 12345778999999888643 346999999876
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=97.89 E-value=3.7e-05 Score=73.84 Aligned_cols=143 Identities=11% Similarity=-0.007 Sum_probs=85.2
Q ss_pred ccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 13 VTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 13 vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
+|.|||+|++..+ + ++..+++|+.|+.++.+++.... .+..+||++||...+...
T Consensus 289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~-------------- 354 (454)
T 3u0b_A 289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN-------------- 354 (454)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC--------------
T ss_pred ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC--------------
Confidence 8999999985322 2 34468999999999999986531 135799999998665321
Q ss_pred CCCCCCCCcccchHHHHHH-----HHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 82 TEDLPRLNVTNFYYTQEDI-----LFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 82 ~E~~p~~p~p~~~y~~e~~-----~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
+ ..+.|+..|. .+..+.+ ..+ +.++.|.|+.|..+-........ ....+ ...+
T Consensus 355 -------~-g~~~YaasKaal~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~~~~------~~~~~-~~~~-- 414 (454)
T 3u0b_A 355 -------R-GQTNYATTKAGMIGLAEALAPVLADKG---ITINAVAPGFIETKMTEAIPLAT------REVGR-RLNS-- 414 (454)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECSBCC----------------CHHHH-HSBT--
T ss_pred -------C-CCHHHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEEcCcccChhhhhcchhh------HHHHH-hhcc--
Confidence 0 1123554443 3333321 257 99999999999775322110000 00000 0011
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..-+...+|+|+++++++... ...|++++|.+|..
T Consensus 415 ----------l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~ 451 (454)
T 3u0b_A 415 ----------LFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQAM 451 (454)
T ss_dssp ----------TSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSBS
T ss_pred ----------ccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCccc
Confidence 112346789999998888642 35699999987653
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.88 E-value=4.3e-05 Score=67.93 Aligned_cols=148 Identities=9% Similarity=-0.060 Sum_probs=80.8
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|++||+|++... +++..+++|+.|+.++++++... ..+-.+||++||...+... ..
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~---------~~- 149 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV---------PT- 149 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---------TT-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC---------CC-
Confidence 468999999985321 33456899999999888887432 0034799999998666421 00
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
... ..+|.+.+.+.+..+.+..+ +.++.|+|+.|..+-...... . . .......
T Consensus 150 --------~~~Y~asKaal~~l~~~la~e~~g---Irvn~v~PG~v~T~~~~~~~~------------~-~--~~~~~~~ 203 (264)
T 3tfo_A 150 --------AAVYCATKFAVRAISDGLRQESTN---IRVTCVNPGVVESELAGTITH------------E-E--TMAAMDT 203 (264)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHCSS---EEEEEEEECCC----------------------------------
T ss_pred --------ChhHHHHHHHHHHHHHHHHHhCCC---CEEEEEecCCCcCcccccccc------------h-h--HHHHHHh
Confidence 000 02344444455555543236 999999999987653221110 0 0 0000000
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCC--CCcceeecCCCc
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYA--RNEAFNCSNGDV 199 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a--~g~~fNI~~g~~ 199 (309)
........+|+|+++++++..+.. .|++.....+.+
T Consensus 204 -----~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~p~~~~ 241 (264)
T 3tfo_A 204 -----YRAIALQPADIARAVRQVIEAPQSVDTTEITIRPTASG 241 (264)
T ss_dssp ---------CCCHHHHHHHHHHHHHSCTTEEEEEEEEEECC--
T ss_pred -----hhccCCCHHHHHHHHHHHhcCCccCccceEEEecCccc
Confidence 011246799999999999876542 355555555543
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=97.85 E-value=8.4e-05 Score=65.57 Aligned_cols=137 Identities=13% Similarity=-0.029 Sum_probs=77.9
Q ss_pred CCccEEEEeecc-cC--C-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWA-SR--P-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~-~~--~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..+|+|||+|+. .. + ++++.+++|+.|+.++++++... ..+..+||++||...+... .
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 174 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV----------A 174 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC----------T
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC----------C
Confidence 468999999985 21 1 23457899999999999986431 0135799999998666321 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+++.++.+ ..+ +.++.++|+.|..+-.... ....
T Consensus 175 --------~~~~Y~asKaa~~~l~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~~-----------------~~~~-- 224 (262)
T 3rkr_A 175 --------DGAAYTASKWGLNGLMTSAAEELRQHQ---VRVSLVAPGSVRTEFGVGL-----------------SAKK-- 224 (262)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCC-------------------------------
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEecCCCcCCccccc-----------------cccc--
Confidence 0000 12334444444444332 257 9999999998865421110 0000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeec
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCS 195 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~ 195 (309)
....+...+|+|+++++++..+. ..||++...
T Consensus 225 --------~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~p 258 (262)
T 3rkr_A 225 --------SALGAIEPDDIADVVALLATQADQSFISEVLVRP 258 (262)
T ss_dssp ------------CCCHHHHHHHHHHHHTCCTTCCEEEEEEEC
T ss_pred --------ccccCCCHHHHHHHHHHHhcCccccccCcEEecc
Confidence 11234578999999998886542 235555443
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1.6e-05 Score=69.37 Aligned_cols=141 Identities=8% Similarity=-0.126 Sum_probs=85.2
Q ss_pred CCccEEEEeecccC------C----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR------P----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~------~----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.++|+|||+|+... . ++++.+++|+.|+.++++++...-..-.|||++||...+... .
T Consensus 75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 142 (241)
T 1dhr_A 75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT----------P-- 142 (241)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------T--
T ss_pred CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC----------C--
Confidence 47899999998532 1 224467899999999999986531001589999998766421 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh----cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|-.+- . +.....
T Consensus 143 ------~~~~Y~asK~a~~~~~~~la~e~~~~~~g---i~v~~v~PG~v~T~~----~-------------~~~~~~--- 193 (241)
T 1dhr_A 143 ------GMIGYGMAKGAVHQLCQSLAGKNSGMPSG---AAAIAVLPVTLDTPM----N-------------RKSMPE--- 193 (241)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHTSTTSSCCTT---CEEEEEEESCEECHH----H-------------HHHSTT---
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHhccCCCC---eEEEEEecCcccCcc----c-------------cccCcc---
Confidence 0000 02334444444444432 235 999999999875531 1 000000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCC--CCCcceeecCCCc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPY--ARNEAFNCSNGDV 199 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~--a~g~~fNI~~g~~ 199 (309)
. .....+..+|+|+++++++..+. ..|+.++|.+++.
T Consensus 194 ----~---~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~~ 232 (241)
T 1dhr_A 194 ----A---DFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTDG 232 (241)
T ss_dssp ----S---CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEETT
T ss_pred ----h---hhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCCC
Confidence 0 11123457899999988886432 4589999986553
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.80 E-value=6.5e-05 Score=66.07 Aligned_cols=134 Identities=5% Similarity=-0.149 Sum_probs=70.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|++||+|++... +++..+++|+.|+.++++++...- .+-.|||++||...+... .
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 150 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG----------S- 150 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC----------T-
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC----------C-
Confidence 478999999985322 334578999999999988874310 034699999998665321 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeE-EeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTW-SVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~-~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+ ++++|+.|..+-...... . ....
T Consensus 151 -------~~~~Y~asKaa~~~l~~~la~e~~~~g---i~v~n~v~PG~v~T~~~~~~~~---------~-------~~~~ 204 (252)
T 3h7a_A 151 -------GFAAFASAKFGLRAVAQSMARELMPKN---IHVAHLIIDSGVDTAWVRERRE---------Q-------MFGK 204 (252)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEEC----------------------------------
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHhhhcC---CEEEEEecCCccCChhhhccch---------h-------hhhh
Confidence 0000 12344444444443332 246 888 899999887653322111 0 0000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
..... ... +..++|+|+++++++..+
T Consensus 205 ~~~~~---~~~-~~~pedvA~~~~~l~s~~ 230 (252)
T 3h7a_A 205 DALAN---PDL-LMPPAAVAGAYWQLYQQP 230 (252)
T ss_dssp -------------CCHHHHHHHHHHHHHCC
T ss_pred hhhcC---Ccc-CCCHHHHHHHHHHHHhCc
Confidence 01111 223 778999999999998765
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00011 Score=65.48 Aligned_cols=146 Identities=10% Similarity=-0.026 Sum_probs=82.0
Q ss_pred CCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhC----cCCCCCc-eEEEEeCCccccCCccccCCCC
Q 045430 11 TDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVI----PNAPNLR-HVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~----~~~~~v~-r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
..+|+|||+|++.. + +++..+++|+.|+.++++++. +. +.. +||++||...+...
T Consensus 96 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~--~~g~~IV~isS~~~~~~~-------- 165 (272)
T 2nwq_A 96 ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH--GAGASIVNLGSVAGKWPY-------- 165 (272)
T ss_dssp SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CTTCEEEEECCGGGTSCC--------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEeCCchhccCC--------
Confidence 46899999998532 1 234468999999888776664 33 346 99999998665321
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.+++|+|+.|.++-....+.. . ...-..
T Consensus 166 ----~------~~~~Y~asKaa~~~l~~~la~el~~~g---Irvn~v~PG~v~T~~~~~~~~~--------~--~~~~~~ 222 (272)
T 2nwq_A 166 ----P------GSHVYGGTKAFVEQFSLNLRCDLQGTG---VRVTNLEPGLCESEFSLVRFGG--------D--QARYDK 222 (272)
T ss_dssp ----T------TCHHHHHHHHHHHHHHHHHHTTCTTSC---CEEEEEEECSBC---------------------------
T ss_pred ----C------CCchHHHHHHHHHHHHHHHHHHhCccC---eEEEEEEcCCCcCcchhccccc--------c--hHHHHH
Confidence 0 0000 02334444454444432 246 9999999999987642111000 0 000000
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCCC-CCCcceeecCCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY-ARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~-a~g~~fNI~~g~ 198 (309)
. +. .......+|+|+++++++..+. ..|+.+.|..+.
T Consensus 223 ~-~~--------~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~~ 260 (272)
T 2nwq_A 223 T-YA--------GAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVS 260 (272)
T ss_dssp ------------CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred h-hc--------cCCCCCHHHHHHHHHHHhCCCccCccceEEEeecc
Confidence 0 00 0123578999999999887543 457788777653
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00013 Score=65.44 Aligned_cols=149 Identities=11% Similarity=0.025 Sum_probs=88.0
Q ss_pred CCccEEEEeecccCC------C--------------h---HHHHHhHHHHHHHHHHHhCcC--CCC------CceEEEEe
Q 045430 11 TDVTHIFYVTWASRP------T--------------E---AENCEVNGAMLRNVLRSVIPN--APN------LRHVCLQT 59 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~--------------~---~~~~~vNv~gt~nll~a~~~~--~~~------v~r~v~~S 59 (309)
..+|++||+|++... + + +..+++|+.|+.++++++... ..+ ..+||++|
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~is 183 (291)
T 1e7w_A 104 GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183 (291)
T ss_dssp SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEe
Confidence 368999999985321 2 2 336799999999999887532 112 47999999
Q ss_pred CCccccCCccccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH
Q 045430 60 GGKHYVGPFESFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV 136 (309)
Q Consensus 60 s~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~ 136 (309)
|...+... +.... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|..+- . +..
T Consensus 184 S~~~~~~~------------------~~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~-~--~~~- 238 (291)
T 1e7w_A 184 DAMTNQPL------------------LGYTIYTMAKGALEGLTRSAALELAPLQ---IRVNGVGPGLSVLVD-D--MPP- 238 (291)
T ss_dssp CTTTTSCC------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBCCGG-G--SCH-
T ss_pred chhhcCCC------------------CCCchhHHHHHHHHHHHHHHHHHHHhcC---eEEEEEeeCCccCCc-c--CCH-
Confidence 98766421 00000 02333344444433322 247 999999999986654 2 110
Q ss_pred HHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 137 GTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 137 ~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.....+. ...|+ +. -+...+|+|+++++++..+ ...|+.++|.+|...
T Consensus 239 ---~~~~~~~--~~~p~---~~--------r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 288 (291)
T 1e7w_A 239 ---AVWEGHR--SKVPL---YQ--------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288 (291)
T ss_dssp ---HHHHHHH--TTCTT---TT--------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ---HHHHHHH--hhCCC---CC--------CCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence 0111111 11121 10 2346889999999988642 346999999988644
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00021 Score=63.91 Aligned_cols=141 Identities=11% Similarity=0.006 Sum_probs=81.9
Q ss_pred CCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..+|++||+|++... + ++..+++|+.|+.++++++...- .+-.|||++||...+... ..
T Consensus 92 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~ 161 (285)
T 3sc4_A 92 GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----------WL 161 (285)
T ss_dssp SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG----------GS
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC----------CC
Confidence 468999999985321 2 24467899999999999886541 134699999998655321 00
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.+. ++.+.. +..+...+
T Consensus 162 -------~~~~Y~asKaal~~~~~~la~e~~~~g---I~vn~v~PG~~v---~t~~~~------------~~~~~~~~-- 214 (285)
T 3sc4_A 162 -------RPTPYMMAKYGMTLCALGIAEELRDAG---IASNTLWPRTTV---ATAAVQ------------NLLGGDEA-- 214 (285)
T ss_dssp -------CSHHHHHHHHHHHHHHHHHHHHTGGGT---CEEEEEECSSCB---CCHHHH------------HHHTSCCC--
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhcccC---cEEEEEeCCCcc---ccHHHH------------hhcccccc--
Confidence 0000 12344444444444432 256 999999998422 211110 11111111
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCC-CCCcceeecC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPY-ARNEAFNCSN 196 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~-a~g~~fNI~~ 196 (309)
..-+...+|+|+++++++..+. ..|+.+.+.+
T Consensus 215 --------~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~dg 247 (285)
T 3sc4_A 215 --------MARSRKPEVYADAAYVVLNKPSSYTGNTLLCED 247 (285)
T ss_dssp --------CTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred --------ccCCCCHHHHHHHHHHHhCCcccccceEEEEcC
Confidence 1234468899999999887543 4466666554
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.76 E-value=6.9e-05 Score=64.66 Aligned_cols=145 Identities=12% Similarity=-0.052 Sum_probs=79.7
Q ss_pred HHHhccCCCC-ccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCcccc
Q 045430 3 TQAKLSKLTD-VTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 3 ~~~~~~~~~~-vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
+++.+..+.+ .|+|||+|+.... ++++.+++|+.|+.++++++...- ..-.+||++||...+...
T Consensus 62 v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~---- 137 (230)
T 3guy_A 62 VEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK---- 137 (230)
T ss_dssp HHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC----
T ss_pred HHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC----
Confidence 3444444432 3999999985322 234467999999999999875431 011289999998766421
Q ss_pred CCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhH
Q 045430 72 GKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH 148 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~ 148 (309)
.. ... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+-...
T Consensus 138 -----~~---------~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~t~~~~~----------------- 183 (230)
T 3guy_A 138 -----AQ---------ESTYCAVKWAVKGLIESVRLELKGKP---MKIIAVYPGGMATEFWET----------------- 183 (230)
T ss_dssp -----TT---------CHHHHHHHHHHHHHHHHHHHHTTTSS---CEEEEEEECCC------------------------
T ss_pred -----CC---------CchhHHHHHHHHHHHHHHHHHHHhcC---eEEEEEECCcccChHHHh-----------------
Confidence 00 000 12344444455444443 246 999999999886542110
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCC---CCcceeec
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYA---RNEAFNCS 195 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a---~g~~fNI~ 195 (309)
.+... ....+..++|+|+++++++..+.+ .|+.+...
T Consensus 184 ~~~~~----------~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~ 223 (230)
T 3guy_A 184 SGKSL----------DTSSFMSAEDAALMIHGALANIGNGYVSDITVNRE 223 (230)
T ss_dssp -------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred cCCCC----------CcccCCCHHHHHHHHHHHHhCcCCCCccceeecCC
Confidence 01111 123566899999999988764432 24444443
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.75 E-value=5.2e-05 Score=73.88 Aligned_cols=141 Identities=9% Similarity=-0.002 Sum_probs=85.8
Q ss_pred CCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCc-cccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGK-HYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~-vYG~~~~~~~~~~~~~~p 80 (309)
..+|.|||+|++... ++ +..+++|+.|+.|+.+++... .++++||++||.. +||.+ .
T Consensus 334 ~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~~~g~~----------g-- 400 (511)
T 2z5l_A 334 YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTGTWGNA----------G-- 400 (511)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGGTTCCT----------T--
T ss_pred CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHhcCCCC----------C--
Confidence 358999999985322 33 345689999999999999765 2578999999974 45532 1
Q ss_pred CCCCCCCCCcccchHHHHH-----HHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 81 FTEDLPRLNVTNFYYTQED-----ILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 81 ~~E~~p~~p~p~~~y~~e~-----~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
...|...| ++.++ . ..+ +++++|+|+.+-+.+....... ..+.+ .|
T Consensus 401 -----------~~~YaaaKa~ld~la~~~-~-~~g---i~v~sv~pG~~~~tgm~~~~~~-------~~~~~-~g----- 451 (511)
T 2z5l_A 401 -----------QGAYAAANAALDALAERR-R-AAG---LPATSVAWGLWGGGGMAAGAGE-------ESLSR-RG----- 451 (511)
T ss_dssp -----------BHHHHHHHHHHHHHHHHH-H-TTT---CCCEEEEECCBCSTTCCCCHHH-------HHHHH-HT-----
T ss_pred -----------CHHHHHHHHHHHHHHHHH-H-HcC---CcEEEEECCcccCCcccccccH-------HHHHh-cC-----
Confidence 12355444 33333 2 357 9999999998843322111100 01100 11
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHH
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVL 209 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i 209 (309)
...++.++++++++.++..+.. ...+++ +.|..+.+.+
T Consensus 452 ----------~~~l~~e~~a~~l~~al~~~~~---~v~v~~---~d~~~~~~~~ 489 (511)
T 2z5l_A 452 ----------LRAMDPDAAVDALLGAMGRNDV---CVTVVD---VDWERFAPAT 489 (511)
T ss_dssp ----------BCCBCHHHHHHHHHHHHHHTCS---EEEECC---BCHHHHHHHH
T ss_pred ----------CCCCCHHHHHHHHHHHHhCCCC---EEEEEe---CCHHHHHhhh
Confidence 2356789999999888865432 344444 4566665544
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=2.7e-05 Score=69.73 Aligned_cols=155 Identities=7% Similarity=-0.043 Sum_probs=88.1
Q ss_pred CCccEEEEeecccCC--------------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCC
Q 045430 11 TDVTHIFYVTWASRP--------------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~--------------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
..+|++||+|++... +++..+++|+.|+.++++++...- .+-.++|++||...+...
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 149 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN-------- 149 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS--------
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC--------
Confidence 468999999985311 134467899999999999986430 011489999998665321
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCc-chhHH-HH---HHHHHHHhH
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSM-MNVVG-TL---CVYAAICKH 148 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~-~~---~i~~~l~~~ 148 (309)
. ..+. ..+|.+.+.+.+..+.+. .. +.+..|+|+.|..+-.... ..... .+ .....+.
T Consensus 150 --~--------~~~~Y~asKaa~~~l~~~la~e~~~~---Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-- 214 (281)
T 3zv4_A 150 --G--------GGPLYTATKHAVVGLVRQMAFELAPH---VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLK-- 214 (281)
T ss_dssp --S--------SCHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSSCC--CCCTTCC--------CCHHHHHH--
T ss_pred --C--------CCchhHHHHHHHHHHHHHHHHHhcCC---CEEEEEECCcCcCCcccccccccccccccchhHHHHHH--
Confidence 0 0000 123444455555555431 23 8999999999987632111 00000 00 0000110
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCCC---CCCcceeecCCCcc
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY---ARNEAFNCSNGDVF 200 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~---a~g~~fNI~~g~~~ 200 (309)
...| ...+...+|+|+++++++..+. ..|++++|.+|...
T Consensus 215 ~~~p------------~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~ 257 (281)
T 3zv4_A 215 SVLP------------IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV 257 (281)
T ss_dssp HTCT------------TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred hcCC------------CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence 1112 1234567789999988887332 46999999988643
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=6.7e-05 Score=65.83 Aligned_cols=146 Identities=11% Similarity=0.013 Sum_probs=84.9
Q ss_pred CCCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 10 LTDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
..++|++||+|++.. + +++..+++|+.|+.++++++. +. +..|||++||...+...
T Consensus 72 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--~~g~iv~isS~~~~~~~-------- 141 (248)
T 3asu_A 72 WCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER--NHGHIINIGSTAGSWPY-------- 141 (248)
T ss_dssp TCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCC--------
T ss_pred CCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEEccchhccCC--------
Confidence 457999999998531 1 234578999999999988875 23 35799999998665321
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceec-ccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFG-FSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyG-p~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|.| +.....+. .-.... .
T Consensus 142 ----~------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~gT~~~~~~~~---------~~~~~~-~ 198 (248)
T 3asu_A 142 ----A------GGNVYGATKAFVRQFSLNLRTDLHGTA---VRVTDIEPGLVGGTEFSNVRFK---------GDDGKA-E 198 (248)
T ss_dssp ----T------TCHHHHHHHHHHHHHHHHHHHHTTTSC---CEEEEEEECSBCC--------------------------
T ss_pred ----C------CCchHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEeccccccCcchhhccc---------CchHHH-H
Confidence 0 0000 12344455555544432 246 9999999999985 32111000 000000 0
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSNG 197 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~g 197 (309)
.+ + ........+|+|+++++++..+ ...|+...+..+
T Consensus 199 ~~-~--------~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 199 KT-Y--------QNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPV 236 (248)
T ss_dssp ---------------CCBCHHHHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred HH-H--------hccCCCCHHHHHHHHHHHhcCCccceeeEEEEccc
Confidence 00 0 0112357899999999988754 345777777654
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=97.65 E-value=7.9e-05 Score=68.24 Aligned_cols=95 Identities=13% Similarity=-0.029 Sum_probs=61.9
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..+|+|||+|++... ++++.+++|+.|+.++++++ ++. +..|||++||...+...
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--~~g~IV~isS~~~~~~~---------- 149 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR--GSGRVLVTGSVGGLMGL---------- 149 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEEGGGTSCC----------
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEECCcccccCC----------
Confidence 359999999985321 23457899999999999996 333 46899999998665321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceeccc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFS 128 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~ 128 (309)
| .... ..+|.+.+.+.+.++.+ ..+ +.+++|+|+.|..+-
T Consensus 150 --~------~~~~Y~aSK~a~~~~~~~la~el~~~g---I~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 150 --P------FNDVYCASKFALEGLCESLAVLLLPFG---VHLSLIECGPVHTAF 192 (327)
T ss_dssp --T------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCC--
T ss_pred --C------CChHHHHHHHHHHHHHHHHHHHhhhcC---cEEEEEEeCcccChH
Confidence 0 0001 13344455555444432 257 999999999998764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.65 E-value=7.3e-05 Score=69.18 Aligned_cols=138 Identities=12% Similarity=-0.024 Sum_probs=82.9
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|+|||+|++... ++++.+++|+.|+.++++++ ++. +..|||++||...+...
T Consensus 128 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~~g~IV~iSS~~~~~~~---------- 195 (346)
T 3kvo_A 128 GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS--KVAHILNISPPLNLNPV---------- 195 (346)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC--SSCEEEEECCCCCCCGG----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCCEEEEECCHHHcCCC----------
Confidence 478999999984221 23457899999999999998 443 45799999998766421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.. +.... ..+|++.+.+.+..+.+. .+ +.+..|.|+.+... ... +..+...+
T Consensus 196 ~~------~~~~~Y~aSKaal~~l~~~la~e~~~g---Irvn~v~PG~~i~T---~~~-------------~~~~~~~~- 249 (346)
T 3kvo_A 196 WF------KQHCAYTIAKYGMSMYVLGMAEEFKGE---IAVNALWPKTAIHT---AAM-------------DMLGGPGI- 249 (346)
T ss_dssp GT------SSSHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEECSBCBCC---HHH-------------HHHCC--C-
T ss_pred CC------CCchHHHHHHHHHHHHHHHHHHHhcCC---cEEEEEeCCCcccc---HHH-------------Hhhccccc-
Confidence 00 00000 133555555555555431 35 99999999853321 111 11111111
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSN 196 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~ 196 (309)
..-+..++|+|+++++++... ...|+.+ |.+
T Consensus 250 ---------~~r~~~pedvA~~v~~L~s~~~~itG~~i-vdg 281 (346)
T 3kvo_A 250 ---------ESQCRKVDIIADAAYSIFQKPKSFTGNFV-IDE 281 (346)
T ss_dssp ---------GGGCBCTHHHHHHHHHHHTSCTTCCSCEE-EHH
T ss_pred ---------cccCCCHHHHHHHHHHHHhcCCCCCceEE-ECC
Confidence 123456899999999988653 2457866 543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00031 Score=61.57 Aligned_cols=127 Identities=9% Similarity=-0.045 Sum_probs=74.7
Q ss_pred CCccEEEEeecccCC--------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP--------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
..+|++||+|++... ++++.+++|+.|+.++++++... ..+-.+||++||...+... .+
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 154 (250)
T 3nyw_A 86 GAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF-----------AD 154 (250)
T ss_dssp CCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CC
T ss_pred CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC-----------CC
Confidence 468999999985321 23457899999999999987421 0034799999997655311 00
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+- . +..+.+.
T Consensus 155 -------~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~T~~----~-------------~~~~~~~---- 203 (250)
T 3nyw_A 155 -------GGIYGSTKFALLGLAESLYRELAPLG---IRVTTLCPGWVNTDM----A-------------KKAGTPF---- 203 (250)
T ss_dssp -------TTHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBCSHH----H-------------HHTTCCS----
T ss_pred -------CcchHHHHHHHHHHHHHHHHHhhhcC---cEEEEEecCcccCch----h-------------hhcCCCc----
Confidence 001 12334444444443332 247 999999999886531 1 1111111
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCC
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
....+...+|+|+++++++..+
T Consensus 204 ------~~~~~~~p~dva~~v~~l~s~~ 225 (250)
T 3nyw_A 204 ------KDEEMIQPDDLLNTIRCLLNLS 225 (250)
T ss_dssp ------CGGGSBCHHHHHHHHHHHHTSC
T ss_pred ------ccccCCCHHHHHHHHHHHHcCC
Confidence 1134678999999999988754
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00023 Score=63.57 Aligned_cols=136 Identities=10% Similarity=-0.080 Sum_probs=77.2
Q ss_pred CCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhCcC----CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVIPN----APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~----~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
..+|+|||+|+... + ++++.+++|+.|+.++++++... .++-.+||++||...+...
T Consensus 110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~--------- 180 (281)
T 4dry_A 110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR--------- 180 (281)
T ss_dssp SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC---------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC---------
Confidence 46899999998531 1 23447899999988887776432 1113689999997655311
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
+.... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.|..+-..... . ...
T Consensus 181 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~g---I~vn~v~PG~v~T~~~~~~~-------------~---~~~ 232 (281)
T 4dry_A 181 ---------PNSAPYTATKHAITGLTKSTALDGRMHD---IACGQIDIGNAATDMTARMS-------------T---GVL 232 (281)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEEECBCC--------------------C---EEE
T ss_pred ---------CCChhHHHHHHHHHHHHHHHHHHhcccC---eEEEEEEECcCcChhhhhhc-------------c---hhh
Confidence 00000 02344444444444432 257 99999999988764321110 0 000
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYA 187 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a 187 (309)
...+.. ...-+..++|+|+++++++..+..
T Consensus 233 ~~~~~~----~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 233 QANGEV----AAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp CTTSCE----EECCCBCHHHHHHHHHHHHHSCTT
T ss_pred hhhhcc----cccCCCCHHHHHHHHHHHhCCCcc
Confidence 000110 112356899999999999987643
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00042 Score=60.12 Aligned_cols=126 Identities=10% Similarity=-0.123 Sum_probs=74.1
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..+|++||+|++... ++++.+++|+.|+.++++++... ..+ .++|++||...+...
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~------------ 142 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGK------------ 142 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSC------------
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCC------------
Confidence 468999999985321 33457899999998888887432 002 399999997655321
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.++.++|+.|-.+- ... . ...+
T Consensus 143 ~------~~~~Y~asKaa~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~----~~~---------~---~~~~---- 193 (235)
T 3l6e_A 143 A------NESLYCASKWGMRGFLESLRAELKDSP---LRLVNLYPSGIRSEF----WDN---------T---DHVD---- 193 (235)
T ss_dssp S------SHHHHHHHHHHHHHHHHHHHHHTTTSS---EEEEEEEEEEECCCC----------------------------
T ss_pred C------CCcHHHHHHHHHHHHHHHHHHHhhccC---CEEEEEeCCCccCcc----hhc---------c---CCCC----
Confidence 0 0000 12344444444444432 246 999999998885432 110 0 0001
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPY 186 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~~ 186 (309)
...+...+|+|+++++++..+.
T Consensus 194 --------~~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 194 --------PSGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp -----------CBCHHHHHHHHHHHTCCCS
T ss_pred --------CcCCCCHHHHHHHHHHHHhCCC
Confidence 1135678999999999887553
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=8.4e-05 Score=65.04 Aligned_cols=135 Identities=12% Similarity=-0.008 Sum_probs=78.0
Q ss_pred CCccEEEEeecccCC------C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP------T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|+|||+|++... + ++..+++|+.|+.++++++... ..+ .|||++||...+...
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------ 149 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV------------ 149 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC------------
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC------------
Confidence 468999999984311 2 3446899999999999987542 013 699999998655321
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
+.... ..+|.+.+.+.+..+.+ ..+ +.+++|||+.|..+-........ ...... . .+
T Consensus 150 ------~~~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~~~~~~~~~-----~~~~~~----~--~~ 209 (247)
T 2jah_A 150 ------RNAAVYQATKFGVNAFSETLRQEVTERG---VRVVVIEPGTTDTELRGHITHTA-----TKEMYE----Q--RI 209 (247)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBSSSGGGGCCCHH-----HHHHHH----H--HT
T ss_pred ------CCCcHHHHHHHHHHHHHHHHHHHhcccC---cEEEEEECCCCCCcchhcccchh-----hHHHHH----h--cc
Confidence 00000 02233333343333321 257 99999999999876422111100 000001 0 11
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
+. ..+...+|+|+++++++..+
T Consensus 210 ~~-------~~~~~pedvA~~v~~l~s~~ 231 (247)
T 2jah_A 210 SQ-------IRKLQAQDIAEAVRYAVTAP 231 (247)
T ss_dssp TT-------SCCBCHHHHHHHHHHHHHSC
T ss_pred cc-------cCCCCHHHHHHHHHHHhCCC
Confidence 11 11467899999999888654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00028 Score=61.25 Aligned_cols=134 Identities=8% Similarity=-0.013 Sum_probs=82.3
Q ss_pred CCccEEEEeeccc-CC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 11 TDVTHIFYVTWAS-RP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
.++|+|||+|+.. .. ++++.+++|+.|+.++++++ ++. +-.|||++||...+...
T Consensus 93 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~~iv~isS~~~~~~~--------- 161 (247)
T 3i1j_A 93 GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS--EDASIAFTSSSVGRKGR--------- 161 (247)
T ss_dssp SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS--SSEEEEEECCGGGTSCC---------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC--CCCeEEEEcchhhcCCC---------
Confidence 3689999999852 11 33456899999999999998 443 45799999997655321
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--c-CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--R-KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~-~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. ..+. ..+|.+.+.+.+..+.+ . .+ +.++.++|+.|-.+ +.. +..
T Consensus 162 -~--------~~~~Y~~sK~a~~~~~~~la~e~~~~~~---i~v~~v~PG~v~t~----~~~------------~~~--- 210 (247)
T 3i1j_A 162 -A--------NWGAYGVSKFATEGLMQTLADELEGVTA---VRANSINPGATRTG----MRA------------QAY--- 210 (247)
T ss_dssp -T--------TCHHHHHHHHHHHHHHHHHHHHHTTTSS---EEEEEEECCCCSSH----HHH------------HHS---
T ss_pred -C--------CcchhHHHHHHHHHHHHHHHHHhcCCCC---eEEEEEecCcccCc----cch------------hcc---
Confidence 0 0001 13345555555555443 1 46 99999999877442 110 100
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceee
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNC 194 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI 194 (309)
+.. ........+|+|+++++++... ...||.+++
T Consensus 211 ---~~~-----~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 211 ---PDE-----NPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp ---TTS-----CGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred ---ccc-----CccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence 001 0112345788999988888543 345888876
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00021 Score=69.37 Aligned_cols=89 Identities=13% Similarity=-0.029 Sum_probs=63.0
Q ss_pred CCccEEEEeeccc-CC------Ch---HHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccc-cCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-RP------TE---AENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHY-VGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~------~~---~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vY-G~~~~~~~~~~~~~~ 79 (309)
..+|.|||+|++. .. ++ +..+++|+.|+.++.+++... ..++||++||...+ |.+ .
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~--~~~~iV~~SS~a~~~g~~----------g- 384 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL--DLDAFVLFSSGAAVWGSG----------G- 384 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTTCT----------T-
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEEEeChHhcCCCC----------C-
Confidence 3699999999954 22 22 446899999999999999887 57899999996544 321 1
Q ss_pred CCCCCCCCCCcccchHHHHHH-----HHHHHHhcCCCcceeEEeecCCceecccC
Q 045430 80 PFTEDLPRLNVTNFYYTQEDI-----LFEEVEKRKGPLSLTWSVHRPHIIFGFSP 129 (309)
Q Consensus 80 p~~E~~p~~p~p~~~y~~e~~-----~~~~~~~~~~~~~~~~~ilRP~~VyGp~~ 129 (309)
...|+..|. .+++. ..+ ++++.|.|+.+.+.+.
T Consensus 385 ------------~~~YaAaKa~ldala~~~~--~~G---i~v~sV~pG~w~~~gm 422 (496)
T 3mje_A 385 ------------QPGYAAANAYLDALAEHRR--SLG---LTASSVAWGTWGEVGM 422 (496)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHH--HTT---CCCEEEEECEESSSCC
T ss_pred ------------cHHHHHHHHHHHHHHHHHH--hcC---CeEEEEECCcccCCcc
Confidence 123554443 33322 257 9999999999887654
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00012 Score=64.44 Aligned_cols=96 Identities=10% Similarity=-0.034 Sum_probs=60.4
Q ss_pred CCccEEEEeeccc-CC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-RP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
.++|+|||+|+.. .. ++++.+++|+.|+.++++++...- .+..|||++||...+... .
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 152 (262)
T 1zem_A 83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP----------P 152 (262)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC----------T
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------C
Confidence 4689999999853 21 235578999999999999876430 135799999998766421 0
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecc
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp 127 (309)
.... ..+|.+.+.+.+..+.+ ..+ +.+++|+|+.|..+
T Consensus 153 --------~~~~Y~asK~a~~~~~~~la~e~~~~g---i~vn~v~PG~v~t~ 193 (262)
T 1zem_A 153 --------NMAAYGTSKGAIIALTETAALDLAPYN---IRVNAISPGYMGPG 193 (262)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSS
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHHhhC---eEEEEEecCCcCcc
Confidence 0000 02233333343333321 257 99999999988654
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00086 Score=59.47 Aligned_cols=136 Identities=9% Similarity=-0.015 Sum_probs=77.2
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|++||+|++... +++..+++|+.|+.++++++... ..+-.|||++||...+... ..
T Consensus 89 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~ 158 (274)
T 3e03_A 89 GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA----------WW 158 (274)
T ss_dssp SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH----------HH
T ss_pred CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC----------CC
Confidence 468999999985321 23446799999999999986421 0134799999998666421 00
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
+.... ..+|.+.+.+.+..+.+ ..+ +.+..++|+.+.. +.+.. .+ .+.+
T Consensus 159 ------~~~~~Y~asKaal~~l~~~la~e~~~~g---I~vn~v~PG~~v~---T~~~~---------~~---~~~~---- 210 (274)
T 3e03_A 159 ------GAHTGYTLAKMGMSLVTLGLAAEFGPQG---VAINALWPRTVIA---TDAIN---------ML---PGVD---- 210 (274)
T ss_dssp ------HHCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEECSBCBC---C-------------------CCC----
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHhhhcC---EEEEEEECCcccc---cchhh---------hc---cccc----
Confidence 00000 02233334444433332 247 9999999984332 22110 00 0111
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcce
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAF 192 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~f 192 (309)
...+...+|+|+++++++..+ ...||.+
T Consensus 211 --------~~~~~~pedvA~~v~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 211 --------AAACRRPEIMADAAHAVLTREAAGFHGQFL 240 (274)
T ss_dssp --------GGGSBCTHHHHHHHHHHHTSCCTTCCSCEE
T ss_pred --------ccccCCHHHHHHHHHHHhCccccccCCeEE
Confidence 112457899999999888653 2347776
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00053 Score=61.25 Aligned_cols=38 Identities=13% Similarity=0.146 Sum_probs=27.6
Q ss_pred HHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCcccc
Q 045430 28 AENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYV 65 (309)
Q Consensus 28 ~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG 65 (309)
++.+++|+.|+.++++++... ..+-.|||++||...+.
T Consensus 146 ~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~ 185 (311)
T 3o26_A 146 EECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSL 185 (311)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSG
T ss_pred hhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCccc
Confidence 345899999988888876421 11357999999987664
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00078 Score=65.78 Aligned_cols=90 Identities=9% Similarity=-0.009 Sum_probs=61.4
Q ss_pred CCCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHhCcCCC--C-CceEEEEeCCccccCCccccCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSVIPNAP--N-LRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~~--~-v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...+|.|||+|++... ++ +..+++|+.|+.++.+++..... + ..+||++||.+.+-..
T Consensus 340 ~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~---------- 409 (525)
T 3qp9_A 340 AHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG---------- 409 (525)
T ss_dssp TSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC----------
T ss_pred cCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC----------
Confidence 3579999999985322 33 44679999999999999876520 1 6899999997655311
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHh---cCCCcceeEEeecCCce
Q 045430 78 DTPFTEDLPRLNVTNFYYTQEDILFEEVEK---RKGPLSLTWSVHRPHII 124 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~---~~~~~~~~~~ilRP~~V 124 (309)
+ ..+.|+..|...+.... ..+ ++++.|.|+.+
T Consensus 410 -----------~-g~~~YaaaKa~l~~lA~~~~~~g---i~v~sI~pG~~ 444 (525)
T 3qp9_A 410 -----------A-GQGAYAAGTAFLDALAGQHRADG---PTVTSVAWSPW 444 (525)
T ss_dssp -----------T-TCHHHHHHHHHHHHHHTSCCSSC---CEEEEEEECCB
T ss_pred -----------C-CCHHHHHHHHHHHHHHHHHHhCC---CCEEEEECCcc
Confidence 0 12347776654443321 246 99999999998
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0018 Score=56.76 Aligned_cols=153 Identities=12% Similarity=0.004 Sum_probs=89.6
Q ss_pred cHHHhccCCCCccEEEEeecccCC-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccC
Q 045430 2 DTQAKLSKLTDVTHIFYVTWASRP-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 2 ~~~~~~~~~~~vd~V~H~A~~~~~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
++++.++.+..+|++++.|++..+ +++..+++|+.|+..+.+++... ..+ .++|.+||...+-..
T Consensus 68 ~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~----- 141 (242)
T 4b79_A 68 RLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGS----- 141 (242)
T ss_dssp HHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCC-----
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCC-----
Confidence 355666777789999999996433 44557899999998888776432 012 589999997544210
Q ss_pred CCCCCCCCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHH
Q 045430 73 KIRPHDTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAI 145 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l 145 (309)
|. ...|...| +.+..+.+ ..+ +.+..|-|+.|--|-......-.. ....+
T Consensus 142 ----------------~~-~~~Y~asKaav~~ltr~lA~Ela~~g---IrVNaV~PG~i~T~m~~~~~~~~~---~~~~~ 198 (242)
T 4b79_A 142 ----------------AD-RPAYSASKGAIVQLTRSLACEYAAER---IRVNAIAPGWIDTPLGAGLKADVE---ATRRI 198 (242)
T ss_dssp ----------------SS-CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCC-----CCCHH---HHHHH
T ss_pred ----------------CC-CHHHHHHHHHHHHHHHHHHHHhhhcC---eEEEEEEeCCCCChhhhcccCCHH---HHHHH
Confidence 11 12355443 22222221 257 999999999886653211111000 11111
Q ss_pred HhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 146 CKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 146 ~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
. ...|+.- +...+|+|+++++.+... -..||++.|..|
T Consensus 199 ~--~~~PlgR------------~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 199 M--QRTPLAR------------WGEAPEVASAAAFLCGPGASFVTGAVLAVDGG 238 (242)
T ss_dssp H--HTCTTCS------------CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred H--hcCCCCC------------CcCHHHHHHHHHHHhCchhcCccCceEEECcc
Confidence 1 1233321 234778999999888542 346999999876
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00068 Score=59.89 Aligned_cols=152 Identities=10% Similarity=0.019 Sum_probs=86.1
Q ss_pred CccEEEEeecccC-------C----C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 12 DVTHIFYVTWASR-------P----T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 12 ~vd~V~H~A~~~~-------~----~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
++|+|||+|++.. + + ++..+++|+.|+.++++++...-..-.+||++||...++.+
T Consensus 87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~---------- 156 (269)
T 2h7i_A 87 KLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP---------- 156 (269)
T ss_dssp CEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT----------
T ss_pred CceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccC----------
Confidence 7899999998532 1 2 24467999999999999987541011589999987554321
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc-----chhH-HHH-HHHHHHHh
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM-----MNVV-GTL-CVYAAICK 147 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~-----~~~~-~~~-~i~~~l~~ 147 (309)
. ... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|..+-.... -... ... .....+.+
T Consensus 157 ~---------~~~Y~asKaa~~~l~~~la~e~~~~g---i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (269)
T 2h7i_A 157 A---------YNWMTVAKSALESVNRFVAREAGKYG---VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ 224 (269)
T ss_dssp T---------THHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH
T ss_pred c---------hHHHHHHHHHHHHHHHHHHHHhcccC---cEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhc
Confidence 0 000 12344444444443332 247 9999999998865421000 0000 000 00000100
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..|+ | +-+...+|+|+++++++... ...|+.++|.+|.
T Consensus 225 --~~p~---~--------rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 225 --RAPI---G--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp --HCTT---C--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred --cCCc---c--------cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 1121 1 12446788999999988643 3458999998774
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.001 Score=58.35 Aligned_cols=95 Identities=6% Similarity=-0.122 Sum_probs=59.8
Q ss_pred CCCccEEEEeec--cc-------CC-------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCcc
Q 045430 10 LTDVTHIFYVTW--AS-------RP-------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 10 ~~~vd~V~H~A~--~~-------~~-------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~ 69 (309)
...+|++||+|+ +. .+ +++..+++|+.++.++..++. +. +..|||++||...+...
T Consensus 81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~-- 156 (260)
T 2qq5_A 81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA--GQGLIVVISSPGSLQYM-- 156 (260)
T ss_dssp TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG--TCCEEEEECCGGGTSCC--
T ss_pred CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc--CCcEEEEEcChhhcCCC--
Confidence 456899999993 21 11 234567899999877766553 43 35799999998665311
Q ss_pred ccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceeccc
Q 045430 70 SFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFS 128 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~ 128 (309)
+ ... ..+|.+.+.+.+.++.+ ..+ +.+++++|+.|..+-
T Consensus 157 ----------~-------~~~Y~asK~a~~~~~~~la~e~~~~g---i~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 157 ----------F-------NVPYGVGKAACDKLAADCAHELRRHG---VSCVSLWPGIVQTEL 198 (260)
T ss_dssp ----------S-------SHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEECCCSCTTT
T ss_pred ----------C-------CCchHHHHHHHHHHHHHHHHHhccCC---eEEEEEecCccccHH
Confidence 0 001 13344455554444432 257 999999999998764
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00047 Score=61.43 Aligned_cols=127 Identities=10% Similarity=-0.009 Sum_probs=75.8
Q ss_pred CCccEEEEe-ecccCC-----C---hHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYV-TWASRP-----T---EAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~-A~~~~~-----~---~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.++|+|||+ |+.... + .++.+++|+.|+.++++++...- .+-.|||++||...+... |
T Consensus 105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------~ 172 (286)
T 1xu9_A 105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY------------P 172 (286)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC------------T
T ss_pred CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC------------C
Confidence 468999999 454211 2 24468999999999999875420 012699999998766421 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh----cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK----RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~----~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... ..+|.+.+.+++.+..+ ..+ +.+++++|+.|..+.. . ...
T Consensus 173 ------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~---i~v~~v~Pg~v~t~~~----~------------~~~------ 221 (286)
T 1xu9_A 173 ------MVAAYSASKFALDGFFSSIRKEYSVSRVN---VSITLCVLGLIDTETA----M------------KAV------ 221 (286)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHHHHTCC---CEEEEEEECCBCCHHH----H------------HHS------
T ss_pred ------CccHHHHHHHHHHHHHHHHHHHHhhcCCC---eEEEEeecCccCChhH----H------------Hhc------
Confidence 0000 12344444444333321 246 9999999998865321 0 000
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
.+. .....+.++|+|++++.++..+
T Consensus 222 ~~~-----~~~~~~~~~~vA~~i~~~~~~~ 246 (286)
T 1xu9_A 222 SGI-----VHMQAAPKEECALEIIKGGALR 246 (286)
T ss_dssp CGG-----GGGGCBCHHHHHHHHHHHHHTT
T ss_pred ccc-----ccCCCCCHHHHHHHHHHHHhcC
Confidence 011 1124568999999999888654
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0034 Score=55.24 Aligned_cols=145 Identities=8% Similarity=0.030 Sum_probs=86.7
Q ss_pred hccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCC
Q 045430 6 KLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 6 ~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
.++...++|++++.|++... +++..+++|+.|+.++.+++... ..+ .++|.+||...+...
T Consensus 69 ~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~------- 140 (247)
T 3ged_A 69 AMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSE------- 140 (247)
T ss_dssp HHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCC-------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCC-------
Confidence 34445578999999985322 34557899999998887776432 012 589999997554211
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHH-----HHHHHHHh-cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhH
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK-RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH 148 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~-~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~ 148 (309)
|. ..-|...| +.+..+.+ ..+ ..+..|-|+.|--+....... ...
T Consensus 141 --------------~~-~~~Y~asKaal~~ltk~lA~ela~~---IrVN~I~PG~i~t~~~~~~~~---------~~~-- 191 (247)
T 3ged_A 141 --------------PD-SEAYASAKGGIVALTHALAMSLGPD---VLVNCIAPGWINVTEQQEFTQ---------EDC-- 191 (247)
T ss_dssp --------------TT-CHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSBCCCC---CCH---------HHH--
T ss_pred --------------CC-CHHHHHHHHHHHHHHHHHHHHHCCC---CEEEEEecCcCCCCCcHHHHH---------HHH--
Confidence 11 12244433 33333332 135 899999999885443322221 111
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCc
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDV 199 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~ 199 (309)
...|+- -+...+|+|+++++.+...-..||++.|.+|-.
T Consensus 192 ~~~Pl~------------R~g~pediA~~v~fL~s~~~iTG~~i~VDGG~s 230 (247)
T 3ged_A 192 AAIPAG------------KVGTPKDISNMVLFLCQQDFITGETIIVDGGMS 230 (247)
T ss_dssp HTSTTS------------SCBCHHHHHHHHHHHHHCSSCCSCEEEESTTGG
T ss_pred hcCCCC------------CCcCHHHHHHHHHHHHhCCCCCCCeEEECcCHH
Confidence 123321 123577899999888876556799999988743
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0015 Score=59.22 Aligned_cols=159 Identities=4% Similarity=-0.117 Sum_probs=79.9
Q ss_pred CCccEEEEeeccc----CC-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS----RP-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~----~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
..+|++||+|++. .+ +++..+++|+.|+.++++++...-..-.+||++||...+... ...
T Consensus 132 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---------~~~ 202 (319)
T 2ptg_A 132 GQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI---------PGY 202 (319)
T ss_dssp SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC-----------------
T ss_pred CCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc---------Ccc
Confidence 4689999999843 11 234467999999999999987541001589999998655321 000
Q ss_pred CCCCCCCCCCcccchHHHHHHHHHHHHh---cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeec
Q 045430 80 PFTEDLPRLNVTNFYYTQEDILFEEVEK---RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 80 p~~E~~p~~p~p~~~y~~e~~~~~~~~~---~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~ 156 (309)
. ..+ ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|..+-......... -.....+.+......+
T Consensus 203 ~----~~Y---~asKaal~~l~~~la~el~~~~g---Irvn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p-- 269 (319)
T 2ptg_A 203 G----GGM---SSAKAALESDCRTLAFEAGRARA---VRVNCISAGPLKSRAASAIGKAGD-KTFIDLAIDYSEANAP-- 269 (319)
T ss_dssp -----------------THHHHHHHHHHHHHHHC---CEEEEEEECCCC-------------------------------
T ss_pred c----hhh---HHHHHHHHHHHHHHHHHhccccC---eeEEEEeeCCccChhhhhcccccc-hhhHHHHHHHHhccCC--
Confidence 0 000 13455544444443322 147 999999999987653211100000 0000000000000001
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..-+...+++|+++++++... ...|+.+.|.+|..
T Consensus 270 --------~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~ 306 (319)
T 2ptg_A 270 --------LQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH 306 (319)
T ss_dssp -----------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred --------CCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence 122457899999999888642 35699999988754
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.002 Score=64.08 Aligned_cols=137 Identities=12% Similarity=0.015 Sum_probs=75.2
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|++||+|++... +++..+++|+.|+.++++++ ++. +-.|||++||...+...
T Consensus 99 ~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~--~~g~IV~isS~a~~~~~-------- 168 (613)
T 3oml_A 99 AFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ--NYGRIIMTSSNSGIYGN-------- 168 (613)
T ss_dssp ------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCEEEEEECCHHHHHCC--------
T ss_pred HCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECCHHHcCCC--------
Confidence 34579999999995321 33457899999999999988 343 35799999997654211
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
.. ... ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.+- .+. . +.
T Consensus 169 -~~---------~~~Y~asKaal~~lt~~la~e~~~~g---I~vn~v~Pg~~t-----~~~-------------~--~~- 214 (613)
T 3oml_A 169 -FG---------QVNYTAAKMGLIGLANTVAIEGARNN---VLCNVIVPTAAS-----RMT-------------E--GI- 214 (613)
T ss_dssp -TT---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEEC------------------------C--CC-
T ss_pred -CC---------ChHHHHHHHHHHHHHHHHHHHhCccC---eEEEEEECCCCC-----hhh-------------h--hc-
Confidence 00 000 02233333344333332 257 999999997531 110 0 00
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSNG 197 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~g 197 (309)
++ . ........+++|+++++++... ...|+.++|.+|
T Consensus 215 ~~---~-----~~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG 252 (613)
T 3oml_A 215 LP---D-----ILFNELKPKLIAPVVAYLCHESCEDNGSYIESAAG 252 (613)
T ss_dssp CC---H-----HHHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred cc---h-----hhhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCC
Confidence 00 0 1122346777999888877543 235889888755
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0048 Score=53.91 Aligned_cols=145 Identities=5% Similarity=-0.109 Sum_probs=82.5
Q ss_pred Ccc--EEEEeeccc-C--------C---ChHHHHHhHHHHHHHHHHHhCcCC--C--CCceEEEEeCCccccCCccccCC
Q 045430 12 DVT--HIFYVTWAS-R--------P---TEAENCEVNGAMLRNVLRSVIPNA--P--NLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 12 ~vd--~V~H~A~~~-~--------~---~~~~~~~vNv~gt~nll~a~~~~~--~--~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
.+| +|||+|++. . . +++..+++|+.|+.++++++...- . +-.|||++||...+...
T Consensus 90 ~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 163 (259)
T 1oaa_A 90 GLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY------ 163 (259)
T ss_dssp TCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC------
T ss_pred cCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC------
Confidence 467 999999852 1 2 234468999999999999885431 0 23679999998766421
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHH----HHHHHHHHhH
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGT----LCVYAAICKH 148 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~----~~i~~~l~~~ 148 (309)
. .... ..+|.+.+.+.+..+.+..+ +.++.++|+.|-.+ +...... -.....+.+
T Consensus 164 ----~--------~~~~Y~asKaa~~~~~~~la~e~~~---i~vn~v~PG~v~T~----~~~~~~~~~~~~~~~~~~~~- 223 (259)
T 1oaa_A 164 ----K--------GWGLYCAGKAARDMLYQVLAAEEPS---VRVLSYAPGPLDND----MQQLARETSKDPELRSKLQK- 223 (259)
T ss_dssp ----T--------TCHHHHHHHHHHHHHHHHHHHHCTT---EEEEEEECCSBSSH----HHHHHHHHCSCHHHHHHHHH-
T ss_pred ----C--------CccHHHHHHHHHHHHHHHHHhhCCC---ceEEEecCCCcCcc----hHHHHhhccCChhHHHHHHH-
Confidence 0 0000 12344455555655554334 88999999877433 1111000 000000000
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeec
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCS 195 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~ 195 (309)
..+ ...+..++|+|+++++++... ...|+.+++.
T Consensus 224 ---~~p----------~~~~~~p~dvA~~v~~l~~~~~~itG~~i~vd 258 (259)
T 1oaa_A 224 ---LKS----------DGALVDCGTSAQKLLGLLQKDTFQSGAHVDFY 258 (259)
T ss_dssp ---HHH----------TTCSBCHHHHHHHHHHHHHHCCSCTTEEEETT
T ss_pred ---hhh----------cCCcCCHHHHHHHHHHHHhhccccCCcEEecc
Confidence 001 123567899999998887632 2457777664
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0012 Score=60.16 Aligned_cols=51 Identities=4% Similarity=0.055 Sum_probs=42.1
Q ss_pred cCCCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCC
Q 045430 8 SKLTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGG 61 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~ 61 (309)
++++|+|+|||+|+... .+..++.+.|+.+|++++++++++ + +++|+++|-
T Consensus 70 ~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~--~-~~~vlv~SN 123 (313)
T 1hye_A 70 RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI--C-DTKIFVITN 123 (313)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH--C-CCEEEECSS
T ss_pred HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh--C-CeEEEEecC
Confidence 35678999999999542 255779999999999999999998 5 788888874
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0068 Score=53.50 Aligned_cols=152 Identities=9% Similarity=-0.037 Sum_probs=86.0
Q ss_pred HHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCcccc
Q 045430 4 QAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
++..+....+|++++.|++... +++..+++|+.|+.++.+++... ..+=.++|.+||...+...
T Consensus 78 ~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~---- 153 (255)
T 4g81_D 78 SKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR---- 153 (255)
T ss_dssp HHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC----
T ss_pred HHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC----
Confidence 3444566689999999985322 44556899999998888765321 0123689999998655321
Q ss_pred CCCCCCCCCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHH
Q 045430 72 GKIRPHDTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAA 144 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~ 144 (309)
|. ...|...| +.+..+.+ ..+ +.+..|-|+.|.-|.......-- .....
T Consensus 154 -----------------~~-~~~Y~asKaal~~ltr~lA~ela~~g---IrVN~V~PG~i~T~~~~~~~~~~---~~~~~ 209 (255)
T 4g81_D 154 -----------------PT-VAPYTAAKGGIKMLTCSMAAEWAQFN---IQTNAIGPGYILTDMNTALIEDK---QFDSW 209 (255)
T ss_dssp -----------------TT-CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCGGGHHHHTCH---HHHHH
T ss_pred -----------------CC-chhHHHHHHHHHHHHHHHHHHhcccC---eEEEEEeeCCCCCchhhcccCCH---HHHHH
Confidence 11 12244333 32222221 257 99999999988654221110000 00111
Q ss_pred HHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 145 ICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 145 l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+. ...|+.- +...+|+|+++++.+... -..||++.|.+|
T Consensus 210 ~~--~~~Pl~R------------~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 210 VK--SSTPSQR------------WGRPEELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp HH--HHSTTCS------------CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HH--hCCCCCC------------CcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 11 1223321 223566888888877532 356999999876
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.003 Score=57.13 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=41.7
Q ss_pred cCCCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeC
Q 045430 8 SKLTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss 60 (309)
++++++|+|||+|+... .+..++...|+.+++++++++++.+ .+.+|+++|
T Consensus 66 ~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--p~~~viv~S 119 (303)
T 1o6z_A 66 EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN--DDYISLTTS 119 (303)
T ss_dssp GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC--SCCEEEECC
T ss_pred HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC--CCcEEEEeC
Confidence 35778999999998542 2556789999999999999999985 577888766
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=96.43 E-value=0.01 Score=54.01 Aligned_cols=96 Identities=6% Similarity=-0.138 Sum_probs=58.9
Q ss_pred CCccEEEEeecccC----C-------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 11 TDVTHIFYVTWASR----P-------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 11 ~~vd~V~H~A~~~~----~-------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..+|++||+|++.. + +++..+++|+.|+.++.+++...- .+ .+||++||...+...
T Consensus 112 g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~~~~~~----------- 179 (329)
T 3lt0_A 112 GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ-SSIISLTYHASQKVV----------- 179 (329)
T ss_dssp CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEEECGGGTSCC-----------
T ss_pred CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeCccccCCC-----------
Confidence 46899999998521 1 234578999999999999986541 11 489999998655311
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--c-CCCcceeEEeecCCceecc
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--R-KGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~-~~~~~~~~~ilRP~~VyGp 127 (309)
|- .. +. ..+|.+.+.+.+..+.+ . .+ +.+..|.|+.|--+
T Consensus 180 -~~--~~---~~Y~asKaal~~~~~~la~el~~~~g---I~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 180 -PG--YG---GGMSSAKAALESDTRVLAYHLGRNYN---IRINTISAGPLKSR 223 (329)
T ss_dssp -TT--CT---TTHHHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCCCCH
T ss_pred -Cc--ch---HHHHHHHHHHHHHHHHHHHHhCCccC---eEEEEEecceeech
Confidence 00 00 01 12233333333332221 2 37 99999999988654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.024 Score=50.07 Aligned_cols=158 Identities=13% Similarity=0.034 Sum_probs=83.9
Q ss_pred ccCCCCccEEEEeecccC----C-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCC
Q 045430 7 LSKLTDVTHIFYVTWASR----P-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~----~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
.+...++|+++|.|++.. + +++..+++|+.|+.++.+++... ..+=.++|.+||....-.
T Consensus 73 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~------- 145 (261)
T 4h15_A 73 RQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP------- 145 (261)
T ss_dssp HHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------
T ss_pred HHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC-------
Confidence 344567899999998421 1 23446799999998887775432 002368999999754321
Q ss_pred CCCCCCCCCCCCCCCCcccchHHHHHH-----HHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH-H----HHH
Q 045430 74 IRPHDTPFTEDLPRLNVTNFYYTQEDI-----LFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG-T----LCV 141 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~p~~~y~~e~~-----~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~-~----~~i 141 (309)
. |....+|...|. .+..+.+ ..+ +.+..|.|+.|--|.......... . ...
T Consensus 146 -----~---------~~~~~~Y~asKaal~~lt~~lA~Ela~~g---IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~ 208 (261)
T 4h15_A 146 -----L---------PESTTAYAAAKAALSTYSKAMSKEVSPKG---VRVVRVSPGWIETEASVRLAERLAKQAGTDLEG 208 (261)
T ss_dssp -----C---------TTTCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHH
T ss_pred -----C---------CCccHHHHHHHHHHHHHHHHHHHHhhhhC---eEEEEEeCCCcCCcchhhhhHHHHHhhccchhh
Confidence 0 111234654432 2222221 257 999999998875432100000000 0 000
Q ss_pred HHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 142 YAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 142 ~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
........-..+|. .=+...+|+|+++++.+... ...||+++|.+|-
T Consensus 209 ~~~~~~~~~~~~Pl----------gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 209 GKKIIMDGLGGIPL----------GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp HHHHHHHHTTCCTT----------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHhcCCCC----------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 00000000001111 12345788999998888532 3469999998774
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.025 Score=50.34 Aligned_cols=152 Identities=12% Similarity=0.107 Sum_probs=85.6
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
+....+|++++.|+.... ++++.+++|+.|+.++.+++...-..=.++|.+||...+-..
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~----------- 167 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT----------- 167 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC-----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC-----------
Confidence 344568999999984221 445578999999999999986541112469999887544210
Q ss_pred CCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh--HHHHHHHHHHHhHh
Q 045430 79 TPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV--VGTLCVYAAICKHE 149 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~--~~~~~i~~~l~~~~ 149 (309)
|. ..-|...| +.+..+.+ ..+ +.+..|-|+.|--|.-...... ...-.++..+.+
T Consensus 168 ----------~~-~~~Y~asKaav~~ltr~lA~Ela~~g---IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-- 231 (273)
T 4fgs_A 168 ----------PA-FSVYAASKAALRSFARNWILDLKDRG---IRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAA-- 231 (273)
T ss_dssp ----------TT-CHHHHHHHHHHHHHHHHHHHHTTTSC---EEEEEEEECSBCC---------CHHHHHHHHHHHHH--
T ss_pred ----------CC-chHHHHHHHHHHHHHHHHHHHhcccC---eEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHh--
Confidence 11 12355443 33333332 256 9999999998866532111100 000111112211
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..|+-- +...+|+|+++++.+... -..||+..|.+|.
T Consensus 232 ~~PlgR------------~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 232 QVPMGR------------VGRAEEVAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp HSTTSS------------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred cCCCCC------------CcCHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence 223211 234778999999888542 3469999998774
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0052 Score=55.48 Aligned_cols=154 Identities=6% Similarity=-0.103 Sum_probs=87.0
Q ss_pred CCccEEEEeeccc----CC-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS----RP-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 11 ~~vd~V~H~A~~~----~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.++|++||+|++. .+ +++..+++|+.|+.++++++...-..-.+||++||...+... ...
T Consensus 119 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---------~~~ 189 (315)
T 2o2s_A 119 GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVV---------PGY 189 (315)
T ss_dssp CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCC---------TTC
T ss_pred CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccC---------CCc
Confidence 4789999999843 11 234568999999999999997541001589999998665321 000
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh---cCCCcceeEEeecCCceecccCCCcc----hhHHHHHHHHHHHhHhCC
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK---RKGPLSLTWSVHRPHIIFGFSPYSMM----NVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~---~~~~~~~~~~ilRP~~VyGp~~~~~~----~~~~~~~i~~~l~~~~g~ 151 (309)
... ..+|.+.+.+.+..+.+ ..+ +.++.|+|+.|..+-..... .... -.....+.+ ..
T Consensus 190 --------~~~Y~asKaal~~l~~~la~el~~~~g---Irvn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~--~~ 255 (315)
T 2o2s_A 190 --------GGGMSSAKAALESDTRTLAWEAGQKYG---VRVNAISAGPLKSRAASAIGKSGEKSFI-DYAIDYSYN--NA 255 (315)
T ss_dssp --------CTTHHHHHHHHHHHHHHHHHHHHHHTC---CEEEEEEECCCCCHHHHHTTCSSSSCHH-HHHHHHHHH--HS
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHhCcccC---eEEEEEecccccchhhhhccccccchhH-HHHHHHHhc--cC
Confidence 001 12344444444443332 147 99999999998654210000 0000 000000000 11
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
|+ .-+...+|+|+++++++... ...|+.+.|.+|..
T Consensus 256 p~------------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 293 (315)
T 2o2s_A 256 PL------------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH 293 (315)
T ss_dssp SS------------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CC------------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence 21 12346788999999888632 34689999988753
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.047 Score=47.67 Aligned_cols=149 Identities=9% Similarity=-0.024 Sum_probs=84.5
Q ss_pred cCCCCccEEEEeecccCC----------ChHH---HHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCC
Q 045430 8 SKLTDVTHIFYVTWASRP----------TEAE---NCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~----------~~~~---~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
+....+|+++|.|++... ++++ ..++|+.++..+..++....+.=.++|.+||....-.
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~-------- 153 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA-------- 153 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC--------
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC--------
Confidence 344568999999984211 2233 3578999988888776554323368999999743321
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK 147 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~ 147 (309)
. |. ..-|...| +.+..+.+ ..+ +.+..|.|+.|--+........- .....+.+
T Consensus 154 ----~---------~~-~~~Y~asKaal~~ltr~lA~Ela~~g---IrVN~V~PG~i~T~~~~~~~~~~---~~~~~~~~ 213 (256)
T 4fs3_A 154 ----V---------QN-YNVMGVAKASLEANVKYLALDLGPDN---IRVNAISAGPIRTLSAKGVGGFN---TILKEIKE 213 (256)
T ss_dssp ----C---------TT-THHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCCCSGGGTTCTTHH---HHHHHHHH
T ss_pred ----c---------cc-chhhHHHHHHHHHHHHHHHHHhCccC---eEEEEEecCCCCChhhhhccCCH---HHHHHHHh
Confidence 0 11 11244433 32222221 257 99999999988665332221110 11112211
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
..|+.- +...+|+|+++++.+... -..||++.|.+|-
T Consensus 214 --~~Pl~R------------~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~ 252 (256)
T 4fs3_A 214 --RAPLKR------------NVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 252 (256)
T ss_dssp --HSTTSS------------CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --cCCCCC------------CcCHHHHHHHHHHHhCchhcCccCCEEEECcCH
Confidence 223321 234778999988888532 3469999998763
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0049 Score=56.42 Aligned_cols=105 Identities=15% Similarity=0.079 Sum_probs=64.7
Q ss_pred CCCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
+++++|+|||+|+... .+..++...|+.+++++++++.+.+ |+ .+||++|.+--.-.. -.. . .++.
T Consensus 80 al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~-a~ii~~SNPv~~~t~--~~~-----~--~~~~ 149 (329)
T 1b8p_A 80 AFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRN-IKVLVVGNPANTNAY--IAM-----K--SAPS 149 (329)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTT-CEEEECSSSHHHHHH--HHH-----H--TCTT
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEEccCchHHHHH--HHH-----H--HcCC
Confidence 3567899999999542 2567899999999999999999984 53 378888875311000 000 0 1111
Q ss_pred CCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecc
Q 045430 85 LPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 85 ~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp 127 (309)
.|.... ..+......+....+.. .+ ++...++...|+|-
T Consensus 150 ~p~~~v~g~t~Ld~~r~~~~la~~-lg---v~~~~v~~~~v~G~ 189 (329)
T 1b8p_A 150 LPAKNFTAMLRLDHNRALSQIAAK-TG---KPVSSIEKLFVWGN 189 (329)
T ss_dssp SCGGGEEECCHHHHHHHHHHHHHH-HT---CCGGGEESCEEEBC
T ss_pred CCHHHEEEeecHHHHHHHHHHHHH-hC---cCHHHceEEEEEec
Confidence 111111 12345555555555543 56 77777887778894
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=95.91 E-value=0.005 Score=56.28 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=40.4
Q ss_pred CCCCccEEEEeecccCC---ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeC
Q 045430 9 KLTDVTHIFYVTWASRP---TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss 60 (309)
+++++|+|||+|+.... +..++..+|+.+++++++++.+.+ .+++|+++|
T Consensus 73 al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~--p~~~viv~S 125 (326)
T 1smk_A 73 ALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC--PRAIVNLIS 125 (326)
T ss_dssp HHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEECC
T ss_pred HcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC--CCeEEEEEC
Confidence 35678999999985422 456789999999999999999985 567888876
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.031 Score=49.26 Aligned_cols=154 Identities=12% Similarity=0.087 Sum_probs=86.3
Q ss_pred HhccCCCCccEEEEeecccCC--------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCC
Q 045430 5 AKLSKLTDVTHIFYVTWASRP--------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 5 ~~~~~~~~vd~V~H~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
+.++....+|++++.|++... +++..+++|+.|+.++.+++... . + .++|.+||...+...
T Consensus 76 ~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~-G~IVnisS~~~~~~~------ 147 (258)
T 4gkb_A 76 QTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-R-GAIVNISSKTAVTGQ------ 147 (258)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCTHHHHCC------
T ss_pred HHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-C-CeEEEEeehhhccCC------
Confidence 334445578999999985322 33446799999998888876432 1 2 589999998655311
Q ss_pred CCCCCCCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH-HHHHHHHHH
Q 045430 74 IRPHDTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV-GTLCVYAAI 145 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~-~~~~i~~~l 145 (309)
|. ...|...| +.+..+.+ ..+ +.+..|-|+.|--|-..+..... ..-.....+
T Consensus 148 ---------------~~-~~~Y~asKaav~~ltr~lA~ela~~g---IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~ 208 (258)
T 4gkb_A 148 ---------------GN-TSGYCASKGAQLALTREWAVALREHG---VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEI 208 (258)
T ss_dssp ---------------SS-CHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCCSCC-----------CHHHHH
T ss_pred ---------------CC-chHHHHHHHHHHHHHHHHHHHhcccC---eEEEEEecCCCCChhHhhhhhcccChHHHHHHH
Confidence 11 12344433 32322221 257 99999999988655322211100 000000111
Q ss_pred HhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 146 CKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 146 ~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
. ...|+ | +-+...+|+|+++++.+... -..||+++|.+|-
T Consensus 209 ~--~~~pl---g--------~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 209 A--AKVPL---G--------RRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp H--TTCTT---T--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred H--hcCCC---C--------CCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence 1 11221 1 12345788999988887532 3569999998774
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.082 Score=46.44 Aligned_cols=152 Identities=13% Similarity=0.012 Sum_probs=85.1
Q ss_pred ccCCCCccEEEEeeccc---CC-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCC
Q 045430 7 LSKLTDVTHIFYVTWAS---RP-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~---~~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
++....+|++++.|++. .+ +++..+++|+.|+.++.+++... ..+=.++|.+||...+-..
T Consensus 79 ~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~------- 151 (254)
T 4fn4_A 79 FETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG------- 151 (254)
T ss_dssp HHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS-------
T ss_pred HHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC-------
Confidence 34445789999999842 22 33456899999998887776432 0023689999997544210
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHH
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAIC 146 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~ 146 (309)
|. ..-|...| +.+..+.+ ..+ +.+..|-|+.|--|-... ....-. ....+.
T Consensus 152 --------------~~-~~~Y~asKaal~~ltr~lA~ela~~g---IrVN~V~PG~i~T~~~~~~~~~~~~---~~~~~~ 210 (254)
T 4fn4_A 152 --------------FA-GAPYTVAKHGLIGLTRSIAAHYGDQG---IRAVAVLPGTVKTNIGLGSSKPSEL---GMRTLT 210 (254)
T ss_dssp --------------SS-CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSSCTTSCSSCCHH---HHHHHH
T ss_pred --------------CC-ChHHHHHHHHHHHHHHHHHHHhhhhC---eEEEEEEeCCCCCcccccccCCcHH---HHHHHH
Confidence 11 11244333 22222221 257 999999999886552211 111000 000111
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+.. .|+ |. +...+|+|+++++.+... -..||+++|..|-.
T Consensus 211 ~~~-~~~---~R---------~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t 252 (254)
T 4fn4_A 211 KLM-SLS---SR---------LAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT 252 (254)
T ss_dssp HHH-TTC---CC---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hcC-CCC---CC---------CcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence 110 111 11 235788999999888532 35699999988753
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.089 Score=46.07 Aligned_cols=144 Identities=15% Similarity=0.068 Sum_probs=82.3
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCc----CCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIP----NAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~----~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
.++|++++.|++... +++..+++|+.|+.++.+++.. .+ .=.++|.+||...+-..
T Consensus 78 g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g-~~G~IVnisS~~~~~g~---------- 146 (247)
T 4hp8_A 78 AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG-RSGKVVNIASLLSFQGG---------- 146 (247)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGTSCC----------
T ss_pred CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CCcEEEEEechhhCCCC----------
Confidence 469999999985322 4455789999999988887532 21 13589999997544210
Q ss_pred CCCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 78 DTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 78 ~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
|. ..-|...| +.+..+.+ ..+ +.+..|-|+.|--|-......- -.....+. ..
T Consensus 147 -----------~~-~~~Y~asKaav~~ltr~lA~Ela~~g---IrVNaV~PG~i~T~~~~~~~~~---~~~~~~~~--~~ 206 (247)
T 4hp8_A 147 -----------IR-VPSYTAAKHGVAGLTKLLANEWAAKG---INVNAIAPGYIETNNTEALRAD---AARNKAIL--ER 206 (247)
T ss_dssp -----------SS-CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCSGGGHHHHTS---HHHHHHHH--TT
T ss_pred -----------CC-ChHHHHHHHHHHHHHHHHHHHHhhcC---eEEEEEeeCCCCCcchhhcccC---HHHHHHHH--hC
Confidence 11 12355443 22222221 257 9999999998854421100000 00111111 12
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
.|+. -+...+|+|+++++.+... -..||++.|..|
T Consensus 207 ~Plg------------R~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 207 IPAG------------RWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp CTTS------------SCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCC------------CCcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence 2321 1234678999988887542 346999999876
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=94.18 E-value=0.04 Score=56.36 Aligned_cols=85 Identities=11% Similarity=-0.017 Sum_probs=57.9
Q ss_pred CccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccc-cCCccccCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHY-VGPFESFGKIRPHDTPF 81 (309)
Q Consensus 12 ~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vY-G~~~~~~~~~~~~~~p~ 81 (309)
.+|.|||+|++..+ +++..+++|+.|+.|+.+++.. .+ +||++||.+.+ |.+
T Consensus 611 ~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~---~l-~iV~~SS~ag~~g~~-------------- 672 (795)
T 3slk_A 611 PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP---DV-ALVLFSSVSGVLGSG-------------- 672 (795)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT---TS-EEEEEEETHHHHTCS--------------
T ss_pred CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh---CC-EEEEEccHHhcCCCC--------------
Confidence 69999999985322 2344679999999999999843 46 89999997654 321
Q ss_pred CCCCCCCCcccchHHHHHHH----HHHHHhcCCCcceeEEeecCCceecc
Q 045430 82 TEDLPRLNVTNFYYTQEDIL----FEEVEKRKGPLSLTWSVHRPHIIFGF 127 (309)
Q Consensus 82 ~E~~p~~p~p~~~y~~e~~~----~~~~~~~~~~~~~~~~ilRP~~VyGp 127 (309)
. ...|.+.|.. +.+.. ..| ++++.|-|+.|-.+
T Consensus 673 --------g-~~~YaAaka~~~alA~~~~-~~G---i~v~sI~pG~v~t~ 709 (795)
T 3slk_A 673 --------G-QGNYAAANSFLDALAQQRQ-SRG---LPTRSLAWGPWAEH 709 (795)
T ss_dssp --------S-CHHHHHHHHHHHHHHHHHH-HTT---CCEEEEEECCCSCC
T ss_pred --------C-CHHHHHHHHHHHHHHHHHH-HcC---CeEEEEECCeECcc
Confidence 1 1236655432 22222 257 99999999887543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=93.39 E-value=0.36 Score=47.62 Aligned_cols=136 Identities=14% Similarity=0.036 Sum_probs=78.1
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCC--CCCceEEEEeCCccc-cCCccccCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNA--PNLRHVCLQTGGKHY-VGPFESFGKIR 75 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~--~~v~r~v~~Ss~~vY-G~~~~~~~~~~ 75 (309)
+....+|+++|.|++... +++..+++|+.|+.++.+++...- .+=.|||++||...+ |.+
T Consensus 391 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~-------- 462 (604)
T 2et6_A 391 DKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF-------- 462 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT--------
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC--------
Confidence 334568999999995321 234468999999998888764320 023589999997543 211
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHH-----HHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhH
Q 045430 76 PHDTPFTEDLPRLNVTNFYYTQEDI-----LFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH 148 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~p~~~y~~e~~-----~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~ 148 (309)
. .+-|++.|. .+..+.+ ..+ +.+..|-|+. .+.+... .
T Consensus 463 --------------~-~~~Y~asKaal~~lt~~la~El~~~g---IrVn~v~PG~-----~T~m~~~---------~--- 507 (604)
T 2et6_A 463 --------------G-QANYSSSKAGILGLSKTMAIEGAKNN---IKVNIVAPHA-----ETAMTLS---------I--- 507 (604)
T ss_dssp --------------T-BHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECC-----CCCC----------------
T ss_pred --------------C-ChhHHHHHHHHHHHHHHHHHHhCccC---eEEEEEcCCC-----CCccccc---------c---
Confidence 1 123555443 2222221 257 9999999962 2222110 0
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecCCC
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSNGD 198 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~g~ 198 (309)
..... ......+++|+++++++... ...|+++.+.+|.
T Consensus 508 ~~~~~------------~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~ 546 (604)
T 2et6_A 508 MREQD------------KNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGW 546 (604)
T ss_dssp -----------------CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTE
T ss_pred Cchhh------------ccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCe
Confidence 00000 12235677888888877532 2468999998774
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=92.31 E-value=0.088 Score=48.16 Aligned_cols=53 Identities=11% Similarity=0.017 Sum_probs=41.0
Q ss_pred CCCCccEEEEeeccc-C--CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCC
Q 045430 9 KLTDVTHIFYVTWAS-R--PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGG 61 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~-~--~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~ 61 (309)
+++++|+|||+|+.. . .+..+..+.|+..++++++++.+.+|+--+++.+|-+
T Consensus 76 ~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 76 AFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp HTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 567899999999853 2 2567789999999999999999986542256666654
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=87.95 E-value=1.7 Score=48.14 Aligned_cols=136 Identities=7% Similarity=-0.052 Sum_probs=76.6
Q ss_pred CccEEEEeeccc--C-C----C--h---HHHHHhHHHHHHHHHHHhCcCCCC-----CceEEEEeCCccccCCccccCCC
Q 045430 12 DVTHIFYVTWAS--R-P----T--E---AENCEVNGAMLRNVLRSVIPNAPN-----LRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 12 ~vd~V~H~A~~~--~-~----~--~---~~~~~vNv~gt~nll~a~~~~~~~-----v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
.+|++||+|++. . + + . +..+++|+.|+.+++++++.. |. -.+||++||...+.
T Consensus 764 ~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~l-p~m~~~~~G~IVnISS~ag~~--------- 833 (1887)
T 2uv8_A 764 DLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSA-RGIETRPAQVILPMSPNHGTF--------- 833 (1887)
T ss_dssp CCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHT-TTCCSCCEEEEEEECSCTTCS---------
T ss_pred CCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhCCCCEEEEEcChHhcc---------
Confidence 599999999953 2 1 2 2 346799999999999987322 12 25899999974331
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHHHHHHH-----HHhcCCCcceeEEeecCCceecccC-CCcchhHHHHHHHHHHHhH
Q 045430 75 RPHDTPFTEDLPRLNVTNFYYTQEDILFEE-----VEKRKGPLSLTWSVHRPHIIFGFSP-YSMMNVVGTLCVYAAICKH 148 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~-----~~~~~~~~~~~~~ilRP~~VyGp~~-~~~~~~~~~~~i~~~l~~~ 148 (309)
+ . ..-|+..|...+. .....+.. +.++.|.|+.|-|... ... .... ...+
T Consensus 834 -----g---------g-~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~-~~~~------~~~~- 889 (1887)
T 2uv8_A 834 -----G---------G-DGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN-NIIA------EGIE- 889 (1887)
T ss_dssp -----S---------C-BTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C-CTTH------HHHH-
T ss_pred -----C---------C-CchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc-hhHH------HHHH-
Confidence 1 0 1136666542221 12112211 8899999999985221 100 0000 0001
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcCC---CCCCcceeec
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP---YARNEAFNCS 195 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~ 195 (309)
..++ -+...+++|+++++++..+ ...|+.++|.
T Consensus 890 -~~pl-------------r~~sPEEVA~avlfLaSd~~as~iTGq~I~VD 925 (1887)
T 2uv8_A 890 -KMGV-------------RTFSQKEMAFNLLGLLTPEVVELCQKSPVMAD 925 (1887)
T ss_dssp -TTSC-------------CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEE
T ss_pred -hcCC-------------CCCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence 1111 1125788999988877543 1247888874
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=85.98 E-value=0.65 Score=41.84 Aligned_cols=49 Identities=12% Similarity=0.272 Sum_probs=38.4
Q ss_pred CCCccEEEEeecccC---CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEe
Q 045430 10 LTDVTHIFYVTWASR---PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQT 59 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~S 59 (309)
++++|+||++|+... .+..+....|+..++.+++++.+.+|+. +||++|
T Consensus 66 ~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a-~viv~s 117 (314)
T 1mld_A 66 LKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDA-MICIIS 117 (314)
T ss_dssp HTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTS-EEEECS
T ss_pred hCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCe-EEEEEC
Confidence 567899999998542 2456788999999999999999987664 566543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=80.93 E-value=0.4 Score=54.95 Aligned_cols=55 Identities=15% Similarity=0.049 Sum_probs=38.5
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccc
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHY 64 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vY 64 (309)
...+|.|||+|++..+ +++..+++|+.|+.|+.+++....+...+||++||....
T Consensus 1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~ 2025 (2512)
T 2vz8_A 1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCG 2025 (2512)
T ss_dssp HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHH
T ss_pred cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhc
Confidence 3469999999984211 344567999999999988876544456899999997543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 309 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.98 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.98 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.97 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.96 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.96 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.95 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.95 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.95 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.92 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.92 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.9 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.9 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.84 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.58 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.56 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.53 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.51 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.47 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.42 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.83 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.31 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.13 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.11 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 97.05 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 96.98 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.94 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 96.93 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 96.89 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 96.88 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 96.86 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 96.85 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 96.82 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 96.81 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 96.81 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 96.79 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.78 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 96.75 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 96.72 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 96.71 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 96.69 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 96.66 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.55 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 96.52 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 96.49 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 96.48 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 96.46 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 96.46 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.39 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.38 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 96.35 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 95.98 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 95.98 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 95.97 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 95.9 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 95.85 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 95.82 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 95.58 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 95.56 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 95.49 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 95.48 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 95.32 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 95.27 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 95.04 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 94.75 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 94.73 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 94.65 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 94.27 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 94.17 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 94.14 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 94.07 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 93.51 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 93.3 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 92.44 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 92.11 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 92.05 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 91.9 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 89.66 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 89.21 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 88.43 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 87.97 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 87.08 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 85.16 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 85.08 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 84.79 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 84.14 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 81.27 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=2.1e-35 Score=270.33 Aligned_cols=232 Identities=12% Similarity=0.031 Sum_probs=182.0
Q ss_pred CCCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
..+.|.|+|+|+.... +..+..++|+.||.|++++|.+. +++||||+||.++||.. ...|++|+
T Consensus 74 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~--~~~~~I~~Ss~~~yg~~---------~~~~~~E~ 142 (322)
T d1r6da_ 74 LRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA--GVGRVVHVSTNQVYGSI---------DSGSWTES 142 (322)
T ss_dssp TTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGCCC---------SSSCBCTT
T ss_pred ccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc--CCceEEEeecceeecCC---------CCCCCCCC
Confidence 4578999999975322 66778899999999999999987 68999999999999964 36689999
Q ss_pred CCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccc
Q 045430 85 LPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDC 161 (309)
Q Consensus 85 ~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~ 161 (309)
+|..|. + .+|...|+++..++++ .+ ++++++||++||||++..- .+.+..+. .+ ..|.++.++|+|.
T Consensus 143 ~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~~lR~~~vyGp~~~~~--~~i~~~i~-~~--~~~~~i~v~~~g~- 212 (322)
T d1r6da_ 143 SPLEPNSPYAASKAGSDLVARAYHRT-YG---LDVRITRCCNNYGPYQHPE--KLIPLFVT-NL--LDGGTLPLYGDGA- 212 (322)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECEEECTTCCTT--SHHHHHHH-HH--HTTCCEEEETTSC-
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH-hC---CCEEEEEeeeEECcCCCcC--cHHHHHHH-HH--HcCCCcEEecCCC-
Confidence 998765 3 4456677777777764 68 9999999999999987421 12222121 11 2477898889988
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHH
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWE 241 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
+.+|++||+|+|+++++++.++ ..|++|||++++.+|+.|+.+.+++.+|.+..... ...
T Consensus 213 --~~r~~i~v~D~a~ai~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~----------~~~------- 272 (322)
T d1r6da_ 213 --NVREWVHTDDHCRGIALVLAGG-RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVR----------KVA------- 272 (322)
T ss_dssp --CEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEE----------EEC-------
T ss_pred --eEEccEEHHHHHHHHHHHHhCC-CCCCeeEEeecccchhHHHHHHHHHHhCCCcccee----------ecC-------
Confidence 7799999999999999999765 45899999999999999999999999997643210 000
Q ss_pred HHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 242 QIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
-.+.. ..+..+|++|+++ +||+|+++++||++++++||+++
T Consensus 273 -------~~~~~----------------~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n 314 (322)
T d1r6da_ 273 -------DRKGH----------------DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (322)
T ss_dssp -------CCTTC----------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred -------CCCCC----------------CceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 00011 1245789999987 69999999999999999999975
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.2e-35 Score=271.98 Aligned_cols=261 Identities=11% Similarity=-0.025 Sum_probs=171.6
Q ss_pred CccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 12 ~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
..|+|||+|+.. ..++.+++++|+.||.|||++|++.+ .+.+||||+||.+|||.+ ...|++|++
T Consensus 78 ~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~---------~~~~~~E~~ 148 (357)
T d1db3a_ 78 QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLV---------QEIPQKETT 148 (357)
T ss_dssp CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTC---------CSSSBCTTS
T ss_pred CCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCC---------CCCCcCCCC
Confidence 359999999842 23778899999999999999998762 245589999999999965 367899999
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcccc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCW 162 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~ 162 (309)
|..|. + .+|+.+|+++..++.+ .+ ++++++||++||||+.+..+..-.....+..+.. .+......|++.
T Consensus 149 ~~~P~~~Y~~sK~~~E~~~~~~~~~-~~---l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~-~~~~~~~~g~~~-- 221 (357)
T d1db3a_ 149 PFYPRSPYAVAKLYAYWITVNYRES-YG---MYACNGILFNHESPRRGETFVTRKITRAIANIAQ-GLESCLYLGNMD-- 221 (357)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHT-TSCCCEEESCTT--
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHH-hC---CCEEEEEeccccCCCCCcCCCchHHHHHHHHHHh-CCCceEEECCCC--
Confidence 88765 2 4456677777777764 68 9999999999999976433221111222222222 123344568877
Q ss_pred ccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHH
Q 045430 163 EGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQ 242 (309)
Q Consensus 163 ~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+.+|++||+|+|+++++++.++ .+++|||++|+.+|++|+.+.+++.+|....... .+........... ...
T Consensus 222 -~~r~~~~v~D~~~a~~~~~~~~--~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~--~~~ 293 (357)
T d1db3a_ 222 -SLRDWGHAKDYVKMQWMMLQQE--QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEG---TGVEEKGIVVSVT--GHD 293 (357)
T ss_dssp -CEECCEEHHHHHHHHHHTTSSS--SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEES---CGGGCEEEEEEEC--SSS
T ss_pred -eeecceeechHHHHHHHHHhCC--CCCeEEECCCCceehHHHHHHHHHHhCCcccccc---ccccccchhhhhh--ccc
Confidence 7799999999999999887653 5789999999999999999999999997644210 0000000000000 000
Q ss_pred HHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHH
Q 045430 243 IVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDK 301 (309)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~ 301 (309)
..+..+.......+-.+. .-.......+|++||++ |||+|+++++||+++++++
T Consensus 294 ---~~~~~~~~~~~~~~~~~~--r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~ 348 (357)
T d1db3a_ 294 ---APGVKPGDVIIAVDPRYF--RPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAN 348 (357)
T ss_dssp ---CTTCCTTCEEEEECGGGC--CCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred ---ccccccCceeEeeccccC--CCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 000000100000000000 00000124679999987 6999999999999999754
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-34 Score=263.37 Aligned_cols=230 Identities=13% Similarity=0.062 Sum_probs=173.4
Q ss_pred CCccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
.++|+|||+|+.. ..++.+.+++|+.||.|||++|++. ++ ||||+||..|||.+ ...|.+|+.
T Consensus 64 ~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~--~~-k~I~~SS~~vy~~~---------~~~~~~e~~ 131 (312)
T d2b69a1 64 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV--GA-RLLLASTSEVYGDP---------EVHPQSEDY 131 (312)
T ss_dssp CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH--TC-EEEEEEEGGGGBSC---------SSSSBCTTC
T ss_pred cCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc--CC-cEEEEEChheecCC---------CCCCCCccc
Confidence 4799999999842 2377889999999999999999987 45 89999999999975 244666664
Q ss_pred -----CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 86 -----PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 86 -----p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
|..|. + .+|..+|+++..++.. .+ ++++++||++||||++......+.+..+... ..|.++.++|
T Consensus 132 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~---~~g~~i~i~~ 204 (312)
T d2b69a1 132 WGHVNPIGPRACYDEGKRVAETMCYAYMKQ-EG---VEVRVARIFNTFGPRMHMNDGRVVSNFILQA---LQGEPLTVYG 204 (312)
T ss_dssp CCBCCSSSTTHHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECCEECTTCCTTCCCHHHHHHHHH---HHTCCEEEES
T ss_pred cCCCCCCCCccHHHHHHHHHHHHHHHHHHH-hC---CcEEEEEeeeEECCCCCCCCccHHHHHHHHH---HcCCCeEEeC
Confidence 33333 1 3345567777777664 68 9999999999999987432222333223222 2478898889
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccH
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKE 237 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
++. +.+|++|++|++++++.++... .+++||+++|+.+|+.++...|++.+|.+...- +...
T Consensus 205 ~g~---~~r~~i~v~D~~~~~~~~~~~~--~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~-----------~~~~-- 266 (312)
T d2b69a1 205 SGS---QTRAFQYVSDLVNGLVALMNSN--VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ-----------FLSE-- 266 (312)
T ss_dssp SSC---CEEECEEHHHHHHHHHHHHTSS--CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEE-----------EECC--
T ss_pred CCC---eeEccEEHHHHHHHHHHHHhhc--cCCceEecCCcccchhhHHHHHHHHhCCCCceE-----------ECCC--
Confidence 988 7799999999999998877543 567999999999999999999999999654311 0110
Q ss_pred HHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 238 GVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.++.. .....|++|+++ +||+|.+++++|++++++||++.
T Consensus 267 ------------~~~~~----------------~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~ 307 (312)
T d2b69a1 267 ------------AQDDP----------------QKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 307 (312)
T ss_dssp ------------CTTCC----------------CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ------------CCCCC----------------CeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence 01111 134679999987 69999999999999999999863
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=2.1e-33 Score=258.70 Aligned_cols=237 Identities=13% Similarity=0.050 Sum_probs=180.6
Q ss_pred CCccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
.+.++|+|+|+... .++...+++|+.||.|++++|++. +++||||+||..+||.. ...|.+|++
T Consensus 90 ~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~~~i~~SS~~vyg~~---------~~~~~~E~~ 158 (341)
T d1sb8a_ 90 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDH---------PGLPKVEDT 158 (341)
T ss_dssp TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTC---------CCSSBCTTC
T ss_pred ccccccccccccccccccccCccchhheeehhHHHHHHHHHhc--CCceEEEcccceeeCCC---------CCCCccCCC
Confidence 46789999987432 277779999999999999999987 68999999999999964 367899999
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC--CcchhHHHHHHHHHHHhHhCCceeecCCcc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY--SMMNVVGTLCVYAAICKHEGVPLLFPGSKD 160 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~--~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~ 160 (309)
|..|. + .+|...|+++..+.++ .+ ++++|+||++||||+.. .....+....+... ..|.++.+.|+|.
T Consensus 159 ~~~p~~~Y~~sK~~~E~~~~~~~~~-~~---i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~---~~g~~i~~~g~g~ 231 (341)
T d1sb8a_ 159 IGKPLSPYAVTKYVNELYADVFSRC-YG---FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSM---IQGDDVYINGDGE 231 (341)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHH---HHTCCCEEESSSC
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHH-hC---CCeEEEEeceeeccCcCCCCchhhhHHHHHHHH---HcCCceEEcCCCC
Confidence 98765 2 3455567777666663 67 99999999999999763 22333332222222 2478888889988
Q ss_pred ccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHH
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGV 239 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
+.+|++||+|+|+|+++++..+ ...|++||+++++.+|+.|+...|++.+|.+.... .+... +..
T Consensus 232 ---~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~----~~~~~--~~~----- 297 (341)
T d1sb8a_ 232 ---TSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSY----HREPV--YRD----- 297 (341)
T ss_dssp ---CEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCC----CCCCE--EEC-----
T ss_pred ---EEEEEEEEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccc----ccccc--ccC-----
Confidence 8899999999999999888764 35689999999999999999999999999765322 00000 000
Q ss_pred HHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 240 WEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.++... ....+|++|+++ +||+|++++++|+++|++||++
T Consensus 298 ---------~~~~~~----------------~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~ 338 (341)
T d1sb8a_ 298 ---------FREGDV----------------RHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338 (341)
T ss_dssp ---------CCTTCC----------------SBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred ---------CCCCCc----------------CeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 001111 245689999998 7999999999999999999986
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=5.9e-33 Score=258.63 Aligned_cols=248 Identities=12% Similarity=-0.032 Sum_probs=174.0
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCC-------CCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNA-------PNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~-------~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
.+|+||||||.+.. ++.+++++|+.||.|++++|++.. .+++||||+||..|||..............
T Consensus 73 ~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~ 152 (361)
T d1kewa_ 73 QPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL 152 (361)
T ss_dssp CCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC
T ss_pred CCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCC
Confidence 57999999985332 678899999999999999998752 125699999999999965111000000012
Q ss_pred C-CCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 80 P-FTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 80 p-~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
| ..|+.+..|. + .+|...|.++..+..+ .+ ++++++||++||||++.. ..+.+..+ ..+ ..|.++.+
T Consensus 153 ~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~-~~---i~~~~lR~~~vyGp~~~~--~~~i~~~i-~~~--~~g~~~~v 223 (361)
T d1kewa_ 153 PLFTETTAYAPSSPYSASKASSDHLVRAWRRT-YG---LPTIVTNCSNNYGPYHFP--EKLIPLVI-LNA--LEGKPLPI 223 (361)
T ss_dssp CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECEEESTTCCT--TSHHHHHH-HHH--HHTCCEEE
T ss_pred CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH-hC---CCEEEEecCceECcCCCc--CcHHHHHH-HHH--HcCCCcEE
Confidence 2 3355555444 1 3355677777777764 68 999999999999998742 11111111 122 24788888
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhc
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRG 235 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+|+|. +.||++||+|+|+|++++++++. .|++|||++|+++|+.|+++.|.+.++....... .... ....
T Consensus 224 ~g~g~---~~r~~i~v~D~a~ai~~~~~~~~-~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~--~~~~----~~~~ 293 (361)
T d1kewa_ 224 YGKGD---QIRDWLYVEDHARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT--SYRE----QITY 293 (361)
T ss_dssp ETTSC---CEEEEEEHHHHHHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS--CGGG----GEEE
T ss_pred eCCCC---eEEeCEEHHHHHHHHHHHHhcCC-CCCeEEECCCCCcchHHHHhHhhhhccccccccc--Cccc----ceee
Confidence 89988 77999999999999999998653 4889999999999999999999999986654320 0000 0000
Q ss_pred cHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 236 KEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
. ...+.. .....+|++||++ +||+|.++++||+++|++||+++
T Consensus 294 ~-----------~~~~~~----------------~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n 337 (361)
T d1kewa_ 294 V-----------ADRPGH----------------DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp E-----------CCCTTC----------------CCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred c-----------CCCCCC----------------CceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 0 000111 1245789999987 69999999999999999999875
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=4.2e-32 Score=250.03 Aligned_cols=237 Identities=11% Similarity=0.006 Sum_probs=170.7
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC-
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL- 85 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~- 85 (309)
++|+|||+|+.... ++.+++++|+.||+|+|++|++. +++|||++||.++|+.. ...+..|+.
T Consensus 73 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~--~v~~~i~~Ss~~vy~~~---------~~~~~~e~~~ 141 (338)
T d1udca_ 73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDQ---------PKIPYVESFP 141 (338)
T ss_dssp TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSC---------CSSSBCTTSC
T ss_pred CCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh--CCCEEEecCcceEEccc---------cccccccccc
Confidence 68999999985322 67789999999999999999987 79999999999999854 133444544
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--------chhHHHHHHHHHHHhHhCCcee
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--------MNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--------~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
+..|. + .+|+..|+++.++..+..+ ++++|+||++||||++... .+.+... +.......+.++.
T Consensus 142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~---~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~i~ 216 (338)
T d1udca_ 142 TGTPQSPYGKSKLMVEQILTDLQKAQPD---WSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPY--IAQVAVGRRDSLA 216 (338)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHSTT---CEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHH--HHHHHTTSSSCEE
T ss_pred cCCCcchHHHHHhhhhHHHHHHHhhccC---CeEEEEeeccEEeccCCCCCCCCccccHHHHHHH--HHHHHhcCCCCEE
Confidence 33333 2 3456667777766654457 9999999999999976321 1222221 1111122345677
Q ss_pred ecCCccc---cccceeccCHHHHHHHHHHHhc--CCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCH
Q 045430 155 FPGSKDC---WEGYSVASDADLIAEQHIWAAV--DPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRL 229 (309)
Q Consensus 155 ~~G~~~~---~~~~~~~~~vd~la~a~i~aa~--~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~ 229 (309)
+.|+... ..+.||++||+|+++++..+.. .....+++|||++++++|+.|+++.|++.+|.+...-
T Consensus 217 i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~--------- 287 (338)
T d1udca_ 217 IFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYH--------- 287 (338)
T ss_dssp EECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEE---------
T ss_pred EeCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceE---------
Confidence 7675321 2378999999999998777665 3345578999999999999999999999999654321
Q ss_pred HHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 230 EEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+...+ +... ....+|++|+|+ +||+|.++++||+++|++|++++
T Consensus 288 --~~~~~--------------~~~~----------------~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~ 332 (338)
T d1udca_ 288 --FAPRR--------------EGDL----------------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_dssp --EECCC--------------TTCC----------------SBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred --ECCCC--------------CCCC----------------CEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhc
Confidence 11100 1111 134689999997 69999999999999999999986
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.98 E-value=4.5e-32 Score=251.67 Aligned_cols=241 Identities=11% Similarity=-0.030 Sum_probs=172.2
Q ss_pred cCCCCccEEEEeeccc------CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWAS------RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~------~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
..++++|+|+|+|+.. ..++.+...+|+.||.|++++|++. +++|||++||..+||.... .+......+.
T Consensus 75 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~--~vk~~i~~SS~~~~~~~~~--~~~~~~~~~~ 150 (363)
T d2c5aa1 75 KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQ--LETTNVSLKE 150 (363)
T ss_dssp HHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGS--SSSSSCEECG
T ss_pred HHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh--Ccccccccccccccccccc--cccccccccc
Confidence 3446789999999732 3467778999999999999999987 7999999999999996511 0000011233
Q ss_pred CCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCC-cchhHHHHHHHHHHHhHhCCceeecC
Q 045430 82 TEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYS-MMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 82 ~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~-~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
.|+.|..|. + .+|+.+|+++.++..+ .+ ++++++||++||||++.. ..........+.. ....+.+....|
T Consensus 151 ~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~-~g---l~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 225 (363)
T d2c5aa1 151 SDAWPAEPQDAFGLEKLATEELCKHYNKD-FG---IECRIGRFHNIYGPFGTWKGGREKAPAAFCRK-AQTSTDRFEMWG 225 (363)
T ss_dssp GGGSSBCCSSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEECTTSCCSSSCCCHHHHHHHH-HHHCSSCEEEES
T ss_pred ccCCcCCCCCHHHHHHHHHHHHHHHHHHH-hC---CCEEEEEeeeEeccCCcccccccccccccccc-cccccccccccC
Confidence 455555544 2 3345566666666654 68 999999999999997632 1111111111111 122455667788
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccH
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKE 237 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
+|. +.||++|++|+++++++++..+ .+++|||+.++.+|+.|+.+.+++.+|.+.... ....
T Consensus 226 ~g~---~~rd~i~v~D~~~~~~~~~~~~--~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~-----------~~~~-- 287 (363)
T d2c5aa1 226 DGL---QTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH-----------HIPG-- 287 (363)
T ss_dssp CSC---CEECCEEHHHHHHHHHHHHHSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE-----------EECC--
T ss_pred CCC---eEEEEeehhHHHHHHHHHHhCC--CCCeEEEecCCcccHHHHHHHHHHHhCCCCceE-----------eCCC--
Confidence 887 7799999999999998887653 578999999999999999999999999764311 0100
Q ss_pred HHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 238 GVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
+... ....+|++||++ |||+|.++++||+++|++||++
T Consensus 288 -------------~~~~----------------~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~ 326 (363)
T d2c5aa1 288 -------------PEGV----------------RGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKE 326 (363)
T ss_dssp -------------CCCC----------------SBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHH
T ss_pred -------------CCCc----------------cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 1111 134689999997 6999999999999999999976
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=7.8e-31 Score=238.26 Aligned_cols=236 Identities=11% Similarity=0.032 Sum_probs=174.5
Q ss_pred CccEEEEeecccC------CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR------PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 12 ~vd~V~H~A~~~~------~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
.+|.|||+|+... .++.+++++|+.||.|+|++|++. +++||||+||.+|||.. ...|++|+.
T Consensus 54 ~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~--~v~~~i~~SS~~vyg~~---------~~~~~~E~~ 122 (315)
T d1e6ua_ 54 RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKL---------AKQPMAESE 122 (315)
T ss_dssp CCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTT---------CCSSBCGGG
T ss_pred CCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECCceEcCCC---------CCCCccCCc
Confidence 5799999987322 267789999999999999999987 79999999999999964 356889987
Q ss_pred CCCCc---ccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCC-Cc--chhHHHHHHHHHH-HhHhCCce
Q 045430 86 PRLNV---TNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SM--MNVVGTLCVYAAI-CKHEGVPL 153 (309)
Q Consensus 86 p~~p~---p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~--~~~~~~~~i~~~l-~~~~g~~~ 153 (309)
+.... |++.|+ +|+++..+..+ .+ ++++|+||++||||++. +. ......+..+..+ ....+.++
T Consensus 123 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g---l~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (315)
T d1e6ua_ 123 LLQGTLEPTNEPYAIAKIAGIKLCESYNRQ-YG---RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDV 198 (315)
T ss_dssp TTSSCCCGGGHHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEE
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHH-hC---CCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCce
Confidence 65422 233355 55666666654 58 99999999999999773 11 1111111111111 12346778
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--------CCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--------YARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGE 225 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--------~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~ 225 (309)
...|++. +.+++++++|+++++..+..+. ...+..+|++.+...+..++.+.+++.+|.+....
T Consensus 199 ~~~g~g~---~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~----- 270 (315)
T d1e6ua_ 199 VVWGSGT---PMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVV----- 270 (315)
T ss_dssp EEESCSC---CEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEE-----
T ss_pred EEcCCCc---eEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceE-----
Confidence 8889988 7799999999999998887543 22457899999999999999999999999765421
Q ss_pred CCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHHHC
Q 045430 226 RVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+.. .++... ....+|++|+|+|||+|+++++||+++|++||+++
T Consensus 271 ------~~~--------------~~~~~~----------------~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~~~N 314 (315)
T d1e6ua_ 271 ------FDA--------------SKPDGT----------------PRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN 314 (315)
T ss_dssp ------EET--------------TSCCCC----------------SBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred ------ECC--------------CCCCCC----------------ceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHHc
Confidence 000 001111 13467999999999999999999999999999987
Q ss_pred C
Q 045430 306 R 306 (309)
Q Consensus 306 ~ 306 (309)
+
T Consensus 315 ~ 315 (315)
T d1e6ua_ 315 Q 315 (315)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=9.3e-31 Score=241.59 Aligned_cols=241 Identities=12% Similarity=0.041 Sum_probs=170.8
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
++|+|||+|+.... ++..+..+|+.||.|++++|++. +++|||++||..|||..... ....|++|+.+
T Consensus 74 ~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~--~i~~~i~~SS~~vyg~~~~~-----~~~~~~~e~~~ 146 (347)
T d1z45a2 74 KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY--NVSKFVFSSSATVYGDATRF-----PNMIPIPEECP 146 (347)
T ss_dssp CCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCCGGGS-----TTCCSBCTTSC
T ss_pred CCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc--ccceEEeecceeeecCcccC-----CCCCccccccC
Confidence 78999999985432 66778999999999999999987 79999999999999964211 12567999988
Q ss_pred CCCc-c--cchHHHHHHHHHHHHh-cCCCcceeEEeecCCceecccCCCc--------chhHHHHHHHHHHHhHhCCcee
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEK-RKGPLSLTWSVHRPHIIFGFSPYSM--------MNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~-~~~~~~~~~~ilRP~~VyGp~~~~~--------~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
..|. + .+|+.+|+++.++... ..+ ++++++||++|||+.+... .+.+... ++.. ....+.++.
T Consensus 147 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~---~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~-~~~~-~~~~~~~i~ 221 (347)
T d1z45a2 147 LGPTNPYGHTKYAIENILNDLYNSDKKS---WKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPY-MAQV-AVGRREKLY 221 (347)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHSTTS---CEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHH-HHHH-HTTSSSCCC
T ss_pred CCCCChhHhHHHHHHHHHHHHHHhhccC---CcEEEEeecceEeecCCCccCCCccccHHHHHHH-HHHH-HhcCCCCeE
Confidence 7765 2 3455566666665432 246 9999999999999865321 1122211 1111 122356677
Q ss_pred ecCCccc---cccceeccCHHHHHHHHHHHhcC------CCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCC
Q 045430 155 FPGSKDC---WEGYSVASDADLIAEQHIWAAVD------PYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGE 225 (309)
Q Consensus 155 ~~G~~~~---~~~~~~~~~vd~la~a~i~aa~~------~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~ 225 (309)
+.|++.+ +.+.+|++++.+.+.+++.++.. ....+++|||++++++|+.|+++.+++.+|.+....
T Consensus 222 i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~----- 296 (347)
T d1z45a2 222 IFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK----- 296 (347)
T ss_dssp CC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC------
T ss_pred EeCCCccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceE-----
Confidence 7777653 45788899999999988887652 234578999999999999999999999999765421
Q ss_pred CCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 226 RVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
+...+ +... ....+|++||++ |||+|.++++||+++|++|+++
T Consensus 297 ------~~~~~--------------~~~~----------------~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~ 340 (347)
T d1z45a2 297 ------VTGRR--------------AGDV----------------LNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTE 340 (347)
T ss_dssp ----------------------------C----------------CCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred ------eCCCC--------------CCCC----------------CEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHh
Confidence 11100 1111 134689999988 7999999999999999999998
Q ss_pred C
Q 045430 305 Y 305 (309)
Q Consensus 305 ~ 305 (309)
+
T Consensus 341 n 341 (347)
T d1z45a2 341 N 341 (347)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2e-30 Score=238.40 Aligned_cols=247 Identities=13% Similarity=0.100 Sum_probs=168.1
Q ss_pred CCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 11 TDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+++|+|||+|+.... ++.+++++|+.||.|++++|.+. ++ +++++||+.+||.. ...+.+|+.
T Consensus 66 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~--~~-~~~~~ss~~~~~~~---------~~~~~~~~~ 133 (342)
T d2blla1 66 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY--RK-RIIFPSTSEVYGMC---------SDKYFDEDH 133 (342)
T ss_dssp HHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT--TC-EEEEECCGGGGBTC---------CCSSBCTTT
T ss_pred hCCCccccccccccccccccCCccccccccccccccccccccc--cc-cccccccccccccc---------ccccccccc
Confidence 368999999985432 56778999999999999999987 44 56789999999865 122333332
Q ss_pred CCC---C--cccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcc------hhHHHHHHHHHHHhHh
Q 045430 86 PRL---N--VTNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMM------NVVGTLCVYAAICKHE 149 (309)
Q Consensus 86 p~~---p--~p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~------~~~~~~~i~~~l~~~~ 149 (309)
+.. | .|.+.|+ .|+++..+.++ .+ ++++++||+.||||+..+.+ ..+.. .+...+ ..
T Consensus 134 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~--~~ 206 (342)
T d2blla1 134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK-EG---LQFTLFRPFNWMGPRLDNLNAARIGSSRAIT-QLILNL--VE 206 (342)
T ss_dssp CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECSEECSSCCCTTCSBSCBCHHHH-HHHHHH--HH
T ss_pred ccccccccCCCcchhhhcccchhhhhhhhhcc-cC---ceeEEeeccccccccccccccccccccccch-HHHHHH--Hh
Confidence 221 1 1344455 55555555553 68 99999999999999764322 11111 121222 24
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC-cccHHHHHHHHHHHhccccCCCCCCCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD-VFKWKHLWKVLAEQFEIENYGLPQDGER 226 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~-~~s~~el~~~i~~~~G~~~~~~~~~~~~ 226 (309)
|.++.++|+|. +.++++|++|+|++++.++.++ .+.|++|||++|+ .+|+.|+.+.|++.+|........+ +
T Consensus 207 g~~~~~~~~g~---~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~--~ 281 (342)
T d2blla1 207 GSPIKLIDGGK---QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFP--P 281 (342)
T ss_dssp TCCEEEGGGSC---CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSC--C
T ss_pred CCCccccCCCC---eeeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccC--c
Confidence 78899999988 7799999999999999999764 4668999998775 4899999999999999765432100 0
Q ss_pred CCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 227 VRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
......... ...+ +..... ...+.+|++|+|+ +||+|+++++|||++|++||++.
T Consensus 282 ~~~~~~~~~-~~~~-------~~~~~~----------------~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~ 337 (342)
T d2blla1 282 FAGFRVVES-SSYY-------GKGYQD----------------VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337 (342)
T ss_dssp CCCEEEC------------------------------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ccccceecc-cccc-------cccccc----------------ccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhC
Confidence 000000000 0000 000000 1234689999997 69999999999999999999774
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.97 E-value=1.5e-30 Score=243.38 Aligned_cols=253 Identities=9% Similarity=0.010 Sum_probs=177.6
Q ss_pred HHHhccCCCCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
+++.++...++|+|||+|+.... ++.++.++|+.+|.|+|+++++. +++++++.||+.+|+...... ....
T Consensus 84 l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~--~~~~~~~~~s~~~~~~~~~~~--~~~~ 159 (383)
T d1gy8a_ 84 LNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIFSSSAAIFGNPTMGS--VSTN 159 (383)
T ss_dssp HHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGTBSCCC-------C
T ss_pred hhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc--CCccccccccccccccccccc--cccc
Confidence 45566777789999999984322 66778999999999999999987 789999999999998541110 0112
Q ss_pred CCCCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcch-------hHHHHHHHHHHHh
Q 045430 78 DTPFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMN-------VVGTLCVYAAICK 147 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~-------~~~~~~i~~~l~~ 147 (309)
..|..|+.+..|. + .+|..+|+++.++... .+ ++++++||++||||++..... ...+. ++..+..
T Consensus 160 ~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~-~g---l~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~-ii~~~~~ 234 (383)
T d1gy8a_ 160 AEPIDINAKKSPESPYGESKLIAERMIRDCAEA-YG---IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPI-ILGRVMS 234 (383)
T ss_dssp CCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEECCCTTSSCSCCSTTCCSHHHH-HHHHHHH
T ss_pred ccccccccCCCCCCHHHhhHhHHHHHHHHHHHH-hC---CCEEEEecceeeccCccccccccccccchhHHH-HHHHHHh
Confidence 4578888877665 2 4456677777777764 68 999999999999998742110 01111 1111110
Q ss_pred --------------HhCCceeecCCccc---cccceeccCHHHHHHHHHHHhcCC--------CCCCcceeecCCCcccH
Q 045430 148 --------------HEGVPLLFPGSKDC---WEGYSVASDADLIAEQHIWAAVDP--------YARNEAFNCSNGDVFKW 202 (309)
Q Consensus 148 --------------~~g~~~~~~G~~~~---~~~~~~~~~vd~la~a~i~aa~~~--------~a~g~~fNI~~g~~~s~ 202 (309)
..+.++++.|.... ..+.||++||+|+|++++.++... ...+++|||++|+++|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~ 314 (383)
T d1gy8a_ 235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSV 314 (383)
T ss_dssp HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEH
T ss_pred hccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeH
Confidence 12455666553211 127899999999999998887531 23468999999999999
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh
Q 045430 203 KHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE 282 (309)
Q Consensus 203 ~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~ 282 (309)
.|+.+.|++.+|.+.... ... .+++.. ....+|++||++
T Consensus 315 ~el~~~i~~~~~~~~~~~-----------~~~--------------~~~~d~----------------~~~~~d~~k~~k 353 (383)
T d1gy8a_ 315 REVIEVARKTTGHPIPVR-----------ECG--------------RREGDP----------------AYLVAASDKARE 353 (383)
T ss_dssp HHHHHHHHHHHCCCCCEE-----------EEC--------------CCTTCC----------------SEECBCCHHHHH
T ss_pred HHHHHHHHHHhCCCCceE-----------ECC--------------CCCCCc----------------CEeeeCHHHHHH
Confidence 999999999999664321 010 011221 134679999997
Q ss_pred -cCCCCcCChHHHHHHH-HHHHHHC
Q 045430 283 -HGFLGFRNSKNSFVNW-IDKMKTY 305 (309)
Q Consensus 283 -lGf~p~~~~~~gl~~t-~~~~r~~ 305 (309)
|||+|+++++||+.+| +.|||++
T Consensus 354 ~LGw~P~~~l~e~i~~t~~~w~~~~ 378 (383)
T d1gy8a_ 354 VLGWKPKYDTLEAIMETSWKFQRTH 378 (383)
T ss_dssp HTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHCCccCCCHHHHHHHHHHHHHHhC
Confidence 7999999999999887 6999986
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=1.4e-29 Score=233.59 Aligned_cols=237 Identities=8% Similarity=-0.038 Sum_probs=171.5
Q ss_pred CCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCC-C----CCCCCC
Q 045430 11 TDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGK-I----RPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~-~----~~~~~p 80 (309)
.+++.|+|+|+.... ++.+++++|+.||.|++++|... + .|+|+.||+++||.. ...+ . .....+
T Consensus 72 ~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~--~-~k~i~~ss~~vyg~~--~~~~~~~~~~~~~~~~ 146 (346)
T d1oc2a_ 72 AKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY--D-IRFHHVSTDEVYGDL--PLREDLPGHGEGPGEK 146 (346)
T ss_dssp TTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH--T-CEEEEEEEGGGGCCB--CCGGGSTTTTCSTTSS
T ss_pred hhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc--c-ccccccccceEeccc--CccccccccccCcccc
Confidence 467889999985332 67889999999999999999987 3 589999999999853 1100 0 001235
Q ss_pred CCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 81 FTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 81 ~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
.+|+++..|. + .+|+..|+++..++.. .+ ++++++||++||||+........ ..+. .+ ..|.++.++|
T Consensus 147 ~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~-~~---i~~~ilR~~~vyGp~~~~~~~~~--~~i~-~~--~~~~~~~i~~ 217 (346)
T d1oc2a_ 147 FTAETNYNPSSPYSSTKAASDLIVKAWVRS-FG---VKATISNCSNNYGPYQHIEKFIP--RQIT-NI--LAGIKPKLYG 217 (346)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEESTTCCTTSHHH--HHHH-HH--HHTCCCEEET
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHH-cC---CCEEEEeecceeCCCCCccchhH--HHHH-HH--HcCCceeEeC
Confidence 6677766554 2 3345567777777664 68 99999999999999764222111 1111 11 2477788889
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccH
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKE 237 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
++. +.++++|++|+|++++.++.++ ..|+.||++++++.++.++.+.|.+.+|.+..... ....
T Consensus 218 ~g~---~~r~~i~v~D~a~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------~~~~-- 281 (346)
T d1oc2a_ 218 EGK---NVRDWIHTNDHSTGVWAILTKG-RMGETYLIGADGEKNNKEVLELILEKMGQPKDAYD----------HVTD-- 281 (346)
T ss_dssp TSC---CEEECEEHHHHHHHHHHHHHHC-CTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSE----------EECC--
T ss_pred CCC---ccccccchhhHHHHHHHHHhhc-ccCccccccccccccchHHHHHHHHHhCCCCcceE----------ECCC--
Confidence 988 7899999999999988877654 56889999999999999999999999996543220 0100
Q ss_pred HHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcC-ChHHHHHHHHHHHHHC
Q 045430 238 GVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFR-NSKNSFVNWIDKMKTY 305 (309)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~-~~~~gl~~t~~~~r~~ 305 (309)
+++.. ....+|++||++ |||+|++ +++||+++|++||+++
T Consensus 282 ------------~~~~~----------------~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n 323 (346)
T d1oc2a_ 282 ------------RAGHD----------------LRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 323 (346)
T ss_dssp ------------CTTCC----------------CBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred ------------CCCCC----------------ceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence 01111 134689999987 6999997 6999999999999874
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9.6e-30 Score=234.31 Aligned_cols=238 Identities=9% Similarity=-0.019 Sum_probs=167.2
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
.+++|+|+|+.... ++.+++++|+.||.|+++++++. ++++|+|+||+.+||.. . ...+..++..
T Consensus 81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~--~v~~~i~~ss~~~~~~~--~------~~~~~~~~~~ 150 (346)
T d1ek6a_ 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH--GVKNLVFSSSATVYGNP--Q------YLPLDEAHPT 150 (346)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGCSC--S------SSSBCTTSCC
T ss_pred ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc--Ccccccccccceeeecc--c------cccccccccc
Confidence 57789999985332 67888999999999999999987 79999999999999964 1 1222222222
Q ss_pred CCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc--------chhHHHHHHHHHHHhHhCCceee
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM--------MNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~--------~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
..|. | .+|+.+|+.+.+++....+ ++++++||++||||.+.+. ........+ ......+.++.+
T Consensus 151 ~~~~~~Y~~~k~~~e~~~~~~~~~~~~---~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~i 225 (346)
T d1ek6a_ 151 GGCTNPYGKSKFFIEEMIRDLCQADKT---WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVS--QVAIGRREALNV 225 (346)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHCTT---CEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHH--HHHHTSSSCEEE
T ss_pred cccCChHHHHHHHHHHHHHHHHHhccC---CceEEEeecceeccCCCCCcCccccccHHHHHHHHH--HHHHcCCCcEEE
Confidence 2222 2 2345566677766654357 9999999999999965321 111111111 111223566666
Q ss_pred cCCcc---ccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHH
Q 045430 156 PGSKD---CWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLE 230 (309)
Q Consensus 156 ~G~~~---~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~ 230 (309)
.|+.. ...+.||++|++|+|+++..++.. ....+++|||++++.+|+.|+.+.|++.+|.+.+..
T Consensus 226 ~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~---------- 295 (346)
T d1ek6a_ 226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK---------- 295 (346)
T ss_dssp ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEE----------
T ss_pred cCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeE----------
Confidence 55422 123789999999999998777543 345678999999999999999999999999764321
Q ss_pred HHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 231 EIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
+.+.+ ++.. ....+|++|+++ +||+|+++++||++++++||+++
T Consensus 296 -~~~~~--------------~~e~----------------~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n 340 (346)
T d1ek6a_ 296 -VVARR--------------EGDV----------------AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN 340 (346)
T ss_dssp -EECCC--------------TTCC----------------SEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred -ECCCC--------------CCCC----------------CEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhC
Confidence 11100 1111 134689999998 69999999999999999999985
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=3.5e-29 Score=227.61 Aligned_cols=233 Identities=11% Similarity=-0.020 Sum_probs=169.1
Q ss_pred ccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCC
Q 045430 13 VTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPR 87 (309)
Q Consensus 13 vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~ 87 (309)
.++++|+|+.. ..++.+++++|+.||.|+|++|++.+ ..++|+++||..+||.. ...+.+|++|.
T Consensus 73 ~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~---------~~~~~~E~~~~ 142 (321)
T d1rpna_ 73 PQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLI---------QAERQDENTPF 142 (321)
T ss_dssp CSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSC---------SSSSBCTTSCC
T ss_pred ccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhC-CCcccccccchhhcCcc---------cCCCCCCCCCc
Confidence 56788887632 33678899999999999999999874 35689999999898854 25578899987
Q ss_pred CCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC-Cc-chhHHHHHHHHHHHhHhCCceeecCCcccc
Q 045430 88 LNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SM-MNVVGTLCVYAAICKHEGVPLLFPGSKDCW 162 (309)
Q Consensus 88 ~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~-~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~ 162 (309)
.|. + .+|+..|+++.++..+ .+ ++.+++||++||||..+ +. .+.+ ...+..+.. .+.+....|++.
T Consensus 143 ~p~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~~lr~~~vyGp~~~~~~~~~~i--~~~~~~~~~-~~~~~i~~g~g~-- 213 (321)
T d1rpna_ 143 YPRSPYGVAKLYGHWITVNYRES-FG---LHASSGILFNHESPLRGIEFVTRKV--TDAVARIKL-GKQQELRLGNVD-- 213 (321)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHH-HC---CCEEEEEECCEECTTSCTTSHHHHH--HHHHHHHHT-TSCSCEEESCTT--
T ss_pred cccChhHHHHHHHHHHHHHHHhh-cC---CcEEEEEEecccCCCccccccHHHH--HHHHHHHHh-CCCCcEEECCCC--
Confidence 765 2 4455577777777664 68 99999999999999653 22 2211 122222222 133444578887
Q ss_pred ccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHHH
Q 045430 163 EGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQ 242 (309)
Q Consensus 163 ~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+.+|++||+|+|+++++++.++. ++.|||++++..|+.++.+.+++.+|...... ..... ..
T Consensus 214 -~~r~~i~v~D~~~~~~~~~~~~~--~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~----~~~~~---~~-------- 275 (321)
T d1rpna_ 214 -AKRDWGFAGDYVEAMWLMLQQDK--ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDF----LKIDP---AF-------- 275 (321)
T ss_dssp -CEEECEEHHHHHHHHHHHHHSSS--CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGT----EEECG---GG--------
T ss_pred -eEEccEEeHHHHHHHHHHHhcCC--cCCceecccccceehhhhHHHHHHhCCCccce----eecCC---CC--------
Confidence 77999999999999999987753 57899999999999999999999999764321 00000 00
Q ss_pred HHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 243 IVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.++... ....+|++|+|+ +||+|+++++||+++|++|+.+
T Consensus 276 ------~rp~~~----------------~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~ 316 (321)
T d1rpna_ 276 ------FRPAEV----------------DVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR 316 (321)
T ss_dssp ------CCSSCC----------------CBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred ------CCCCcc----------------CCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 011111 134679999998 6999999999999999999643
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.5e-29 Score=231.00 Aligned_cols=250 Identities=11% Similarity=-0.070 Sum_probs=170.4
Q ss_pred CccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccccCCccccCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDL 85 (309)
Q Consensus 12 ~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~ 85 (309)
+.++|+|+|+.. ..++.++.++|+.||.|++++|++++ .+.+||||+||.+|||.+ ...|++|++
T Consensus 79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~---------~~~~~~E~~ 149 (347)
T d1t2aa_ 79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKV---------QEIPQKETT 149 (347)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSC---------SSSSBCTTS
T ss_pred ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCC---------CCCCCCCCC
Confidence 567899998743 22667788999999999999998863 234689999999999964 367899999
Q ss_pred CCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcch-hHHHHHHHHHHHhHhCCceeecCCccc
Q 045430 86 PRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMN-VVGTLCVYAAICKHEGVPLLFPGSKDC 161 (309)
Q Consensus 86 p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~-~~~~~~i~~~l~~~~g~~~~~~G~~~~ 161 (309)
|..|. + .+|..+|+++.++..+ .+ ++++++||++||||+...... ......+.... ..+.++...|++.
T Consensus 150 ~~~P~~~Yg~sK~~aE~~~~~~~~~-~~---~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~--~~~~~~~~~g~g~- 222 (347)
T d1t2aa_ 150 PFYPRSPYGAAKLYAYWIVVNFREA-YN---LFAVNGILFNHESPRRGANFVTRKISRSVAKIY--LGQLECFSLGNLD- 222 (347)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHH--HTSCSCEEESCTT-
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH-hC---CCEEEEEecceeCCCCCCCccccccceeeehhh--cCCcceeecCCCc-
Confidence 98765 2 4456677777776664 68 999999999999997643221 11111111111 1355677788887
Q ss_pred cccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHHH
Q 045430 162 WEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWE 241 (309)
Q Consensus 162 ~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
+.++++||+|+++++++++.+.. ++.||++++...++.+....+...+|....... ..... +....
T Consensus 223 --~~r~~i~v~D~~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~---- 288 (347)
T d1t2aa_ 223 --AKRDWGHAKDYVEAMWLMLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG--KNENE----VGRCK---- 288 (347)
T ss_dssp --CEECCEEHHHHHHHHHHHHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEES--CGGGC----EEEET----
T ss_pred --ceeeeeEecHHHHHHHHHhhcCC--Cccceeccccccccchhhhhhhhhhcceeeecc--cchhh----hhhhh----
Confidence 78999999999999999987653 468999999999999999999999997643210 00000 00000
Q ss_pred HHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHH
Q 045430 242 QIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDK 301 (309)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~ 301 (309)
. .........+.+.. -.......+|++|||+ |||+|+++++||+++|+++
T Consensus 289 -------~-~~~~~~~~~~~~~r--p~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~ 339 (347)
T d1t2aa_ 289 -------E-TGKVHVTVDLKYYR--PTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHA 339 (347)
T ss_dssp -------T-TCCEEEEECGGGSC--SSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred -------h-cCCceeeecccCCC--CCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 0 00000000000000 0001134679999987 6999999999999999754
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=3.6e-28 Score=222.35 Aligned_cols=236 Identities=10% Similarity=-0.052 Sum_probs=167.6
Q ss_pred CccEEEEeecccC-----CChHHHHHhHHHHHHHHHHHhCcCC---CCCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASR-----PTEAENCEVNGAMLRNVLRSVIPNA---PNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 12 ~vd~V~H~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~---~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
++|+|||+|+... .++.+..++|+.||.+++++++... ....++++.||..+|+.. ..+.+|
T Consensus 79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~----------~~~~~E 148 (339)
T d1n7ha_ 79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST----------PPPQSE 148 (339)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS----------CSSBCT
T ss_pred ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC----------CCCCCC
Confidence 6799999998533 2777899999999999999997541 123467777777777642 557999
Q ss_pred CCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcc
Q 045430 84 DLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKD 160 (309)
Q Consensus 84 ~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~ 160 (309)
++|..|. + .+|...|+++..+..+ .+ ++++++||++||||+.+..+..-.......... ....+..+.|++.
T Consensus 149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~---~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~-~~~~~~~~~g~~~ 223 (339)
T d1n7ha_ 149 TTPFHPRSPYAASKCAAHWYTVNYREA-YG---LFACNGILFNHESPRRGENFVTRKITRALGRIK-VGLQTKLFLGNLQ 223 (339)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHH-HTSCCCEEESCTT
T ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHH-hC---CCEEEEEEccccCCCCCCCCCcchhhHHHHHHh-cCCCCeEEeCCCC
Confidence 9987765 2 3455566666666664 68 999999999999997643221111111111211 1234455678887
Q ss_pred ccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHHHH
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+.+|++|++|+|+++.+++.++. +..+++..+...|+.++.+.+.+.+|...... ..... .
T Consensus 224 ---~~rd~~~v~D~a~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~----~~~~~---~------- 284 (339)
T d1n7ha_ 224 ---ASRDWGFAGDYVEAMWLMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDY----VEIDQ---R------- 284 (339)
T ss_dssp ---CEEECEEHHHHHHHHHHHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGT----EEECG---G-------
T ss_pred ---ccccceeeehHHHHHHHHHhcCC--CCccccccccccccchhhhhhhhhhhcccCce----eeecc---C-------
Confidence 78999999999999999888753 45788888999999999999999999765421 00000 0
Q ss_pred HHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
..++... .....|++||++ |||+|+++++||+++|++||.+
T Consensus 285 -------~~r~~~~----------------~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~ 326 (339)
T d1n7ha_ 285 -------YFRPAEV----------------DNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLE 326 (339)
T ss_dssp -------GSCSSCC----------------CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCC----------------CeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 0112221 134679999987 6999999999999999999854
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=1e-27 Score=224.53 Aligned_cols=235 Identities=11% Similarity=0.023 Sum_probs=160.2
Q ss_pred CccEEEEeeccc-----CCC---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS-----RPT---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTE 83 (309)
Q Consensus 12 ~vd~V~H~A~~~-----~~~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E 83 (309)
++|+|||+|+.. ..+ +.+++++||.||.|+|++|++.+ ..++|+++||..+||.. ..|.+|
T Consensus 90 ~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss~~~~~~~----------~~~~~~ 158 (393)
T d1i24a_ 90 EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTP----------NIDIEE 158 (393)
T ss_dssp CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCC----------SSCBCS
T ss_pred cchheeccccccccccccccccccccccccccccccHHHHHHHHhc-cccceeecccccccccc----------cccccc
Confidence 469999999842 122 34578999999999999999874 34578888888888864 122222
Q ss_pred C--------------CCCCCcccchHH-----HHHHHHHHHHhcCCCcceeEEeecCCceecccCCCc------------
Q 045430 84 D--------------LPRLNVTNFYYT-----QEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSM------------ 132 (309)
Q Consensus 84 ~--------------~p~~p~p~~~y~-----~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~------------ 132 (309)
. .|.. |.+.|+ +|+++..+..+ .+ ++++++||++||||++...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~--p~~~Y~~sK~~aE~~~~~~~~~-~~---l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~ 232 (393)
T d1i24a_ 159 GYITITHNGRTDTLPYPKQ--ASSFYHLSKVHDSHNIAFTCKA-WG---IRATDLNQGVVYGVKTDETEMHEELRNRLDY 232 (393)
T ss_dssp SEEEEEETTEEEEEECCCC--CCSHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred ccccccccccccccccccc--cccHHHHHhhhhcccccccccc-cc---eeeeecccccccCCCcccccccccccccccc
Confidence 1 2223 334455 55555555553 68 9999999999999976311
Q ss_pred ---chhHHHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceee-cCCCcccHHHHHHH
Q 045430 133 ---MNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNC-SNGDVFKWKHLWKV 208 (309)
Q Consensus 133 ---~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI-~~g~~~s~~el~~~ 208 (309)
+..+. ..+.. +...|.++++.|++. +.||++||+|+++++++++.++.+.|+.+++ ..++.+|+.||.+.
T Consensus 233 ~~~~~~~i--~~~~~-~~~~~~~~~i~g~~~---~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~ 306 (393)
T d1i24a_ 233 DAVFGTAL--NRFCV-QAAVGHPLTVYGKGG---QTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASL 306 (393)
T ss_dssp STTTCCHH--HHHHH-HHHHTCCEEEETTSC---CEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHH
T ss_pred ccccccch--hhhhH-HhhcCCeeEEeeecc---cccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHH
Confidence 11121 12211 113588999999998 7899999999999999999877666665443 34577999999999
Q ss_pred HHHHhccccCCCCCCCCCCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCc
Q 045430 209 LAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGF 288 (309)
Q Consensus 209 i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~ 288 (309)
|.+..+..+.... .. .... ...+.. ......|++|+++|||+|+
T Consensus 307 i~~~~~~~~~~~~--~~------~~~~------------~~~~~~----------------~~~~~~d~~k~~~LGw~P~ 350 (393)
T d1i24a_ 307 VTKAGSKLGLDVK--KM------TVPN------------PRVEAE----------------EHYYNAKHTKLMELGLEPH 350 (393)
T ss_dssp HHHHHHTTTCCCC--EE------EECC------------SSCSCS----------------SCCCCBCCCHHHHTTCCCC
T ss_pred HHHHHHhhCCCcc--ee------eccC------------CCCCCC----------------ccEecCCHHHHHHcCCccc
Confidence 9888764332210 00 0000 000011 0134679999999999999
Q ss_pred CChHHHHHHHHHHHHHC
Q 045430 289 RNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 289 ~~~~~gl~~t~~~~r~~ 305 (309)
++++++++++++|+++.
T Consensus 351 ~~~~~~i~~~~~~~~~~ 367 (393)
T d1i24a_ 351 YLSDSLLDSLLNFAVQF 367 (393)
T ss_dssp CCCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 99999999999998775
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.95 E-value=1.7e-27 Score=216.73 Aligned_cols=242 Identities=13% Similarity=0.072 Sum_probs=161.3
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC---------CC
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR---------PH 77 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~---------~~ 77 (309)
..|+|||+|+.... ++.++.++||.||+|||++|.+. +++++++.||+.+++..... .+.. ..
T Consensus 72 ~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~i~~sS~~~~~~~~~~-~~~~~~~~~~~~~~~ 148 (338)
T d1orra_ 72 MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY--NSNCNIIYSSTNKVYGDLEQ-YKYNETETRYTCVDK 148 (338)
T ss_dssp CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEEGGGGTTCTT-SCEEECSSCEEETTC
T ss_pred CCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc--cccccccccccccccccccc-ccccccccccccccc
Confidence 36999999985322 67889999999999999999987 46665555555554432000 0000 00
Q ss_pred CCCCCCCCCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC-CcchhHHHHHHHHHH--HhHhCC
Q 045430 78 DTPFTEDLPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-SMMNVVGTLCVYAAI--CKHEGV 151 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~~~~~~~~~~i~~~l--~~~~g~ 151 (309)
..+..++.+..|. + ..++..|.++..+... .+ ...+++|+++|||+... .....+....+...+ ....+.
T Consensus 149 ~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
T d1orra_ 149 PNGYDESTQLDFHSPYGCSKGAADQYMLDYARI-FG---LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINK 224 (338)
T ss_dssp TTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCC
T ss_pred ccCcccCCccccccccccccchhhhhhhhhhhc-cC---cccccccccceeeccccccccccccchhhHHHHHHHhccCC
Confidence 0112233333322 1 2234455555555553 67 89999999999988552 222222222222222 123477
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecC--CCcccHHHHHHHHHHHhccccCCCCCCCCCCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSN--GDVFKWKHLWKVLAEQFEIENYGLPQDGERVR 228 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~--g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~ 228 (309)
++++.|+|. +.+|++|++|++++++.|+.++ .+.|++||+.. +..+++.|+...+.+.+|.+.... ..+
T Consensus 225 ~~~~~g~g~---~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~---~~~-- 296 (338)
T d1orra_ 225 PFTISGNGK---QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFT---NLP-- 296 (338)
T ss_dssp CEEEESSSC---CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEE---EEC--
T ss_pred ceEEeCCCc---eeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeE---eCC--
Confidence 899999988 7799999999999999988764 46789999964 566899999999999999764321 000
Q ss_pred HHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 229 LEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.++... ....+|++|||+ |||+|+++++||+++|++|+|+
T Consensus 297 --------------------~~~~~~----------------~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 297 --------------------VRESDQ----------------RVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp --------------------CCSSCC----------------SEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred --------------------CCCCCc----------------CeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence 011111 134679999997 7999999999999999999986
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=4.8e-25 Score=197.32 Aligned_cols=233 Identities=11% Similarity=0.077 Sum_probs=147.0
Q ss_pred cCCCCccEEEEeeccc---CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCC
Q 045430 8 SKLTDVTHIFYVTWAS---RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTED 84 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~---~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~ 84 (309)
..+..+++|+|+|+.. ..+...+.+.|+.++.+++++++.. +++ +++.||+.+|+.+ ...+..|+
T Consensus 64 ~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~i~-~v~~ss~~~~~~~---------~~~~~~~~ 131 (307)
T d1eq2a_ 64 EEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER--EIP-FLYASSAATYGGR---------TSDFIESR 131 (307)
T ss_dssp CCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH--TCC-EEEEEEGGGGTTC---------CSCBCSSG
T ss_pred hcccchhhhhhhcccccccccccccccccccccccccccccccc--ccc-ccccccccccccc---------cccccccc
Confidence 4567899999999843 2266778899999999999999987 565 5666666666544 13344555
Q ss_pred CCCCCc-c--cchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCC-C-cchhHHHHHHHHHHHhHhCCc-eeecCC
Q 045430 85 LPRLNV-T--NFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPY-S-MMNVVGTLCVYAAICKHEGVP-LLFPGS 158 (309)
Q Consensus 85 ~p~~p~-p--~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~-~-~~~~~~~~~i~~~l~~~~g~~-~~~~G~ 158 (309)
.+..|. + .+|+..|+++.++..+ .+ ++++++||++||||++. . ....+. ..+...+. .|.. ..+.|+
T Consensus 132 ~~~~~~~~Y~~~K~~~e~~~~~~~~~-~~---~~~~~~r~~~vyGp~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~g~ 204 (307)
T d1eq2a_ 132 EYEKPLNVYGYSKFLFDEYVRQILPE-AN---SQIVGFRYFNVYGPREGHKGSMASVA-FHLNTQLN--NGESPKLFEGS 204 (307)
T ss_dssp GGCCCSSHHHHHHHHHHHHHHHHGGG-CS---SCEEEEEECEEESSSCGGGGGGSCHH-HHHHHHHH--C----------
T ss_pred cccccccccccccchhhhhccccccc-cc---cccccccceeEeeccccccccccccc-cccccccc--cccceeeecCc
Confidence 443333 1 3456677777777664 67 99999999999999873 2 222221 12222222 2333 334577
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHH
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEG 238 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+. +.++++|++|++++++.+..++ .++.||+++|+..|++|+.+.|++..+..... +.+....
T Consensus 205 ~~---~~r~~~~v~d~~~~~~~~~~~~--~~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~------------~~~~~~~ 267 (307)
T d1eq2a_ 205 EN---FKRDFVYVGDVADVNLWFLENG--VSGIFNLGTGRAESFQAVADATLAYHKKGQIE------------YIPFPDK 267 (307)
T ss_dssp ------CBCEEEHHHHHHHHHHHHHHC--CCEEEEESCSCCBCHHHHHHHC-----------------------------
T ss_pred cc---eeeeeeecccHHHHHHHHhhhc--cccccccccccchhHHHHHHHHHHhcCCCCee------------EeeCCcc
Confidence 66 7799999999999998888654 35799999999999999999997765532111 1110000
Q ss_pred HHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhc-CCCCcCChHHHHHHHHHHH
Q 045430 239 VWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEH-GFLGFRNSKNSFVNWIDKM 302 (309)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~l-Gf~p~~~~~~gl~~t~~~~ 302 (309)
+.... ......|++|++++ ||.|.++++||+++|++||
T Consensus 268 ----------~~~~~----------------~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 268 ----------LKGRY----------------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp --------------C----------------CCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred ----------CCCCC----------------ceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 00000 01235699999985 9999999999999999997
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.92 E-value=1.1e-24 Score=200.12 Aligned_cols=233 Identities=12% Similarity=0.008 Sum_probs=157.6
Q ss_pred CccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 12 ~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
..|+|+|+|+.... ++.++.++|+.||.|+++++++.+ ..+++++.||..+|+.. . ...+.+|+.+
T Consensus 79 ~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~-~~~~~~~~s~~~~~~~~----~----~~~~~~~~~~ 149 (356)
T d1rkxa_ 79 QPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSDKCYDNK----E----WIWGYRENEA 149 (356)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCGGGBCCC----C----SSSCBCTTSC
T ss_pred hhhhhhhhhccccccccccCCccccccccccchhhhhhhhccc-ccccccccccccccccc----c----cccccccccc
Confidence 46899999985332 678899999999999999999874 45555555555555432 1 2557888887
Q ss_pred CCCc-c--cchHHHHHHHHHHHHh--------cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 87 RLNV-T--NFYYTQEDILFEEVEK--------RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 87 ~~p~-p--~~~y~~e~~~~~~~~~--------~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
..|. | .+|+..|..+..+... ..+ +.++++||++||||++...-.. .. .+...+ .+.....
T Consensus 150 ~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~---~~~~~~r~~~vyGp~~~~~~~~-i~-~~~~~~---~~~~~~~ 221 (356)
T d1rkxa_ 150 MGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG---TAVATVRAGNVIGGGDWALDRI-VP-DILRAF---EQSQPVI 221 (356)
T ss_dssp BCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC---CEEEEEECCCEECTTCCCSSCH-HH-HHHHHH---HTTCCEE
T ss_pred cCCCCccccccccchhhhhHHhhhcccchhccccC---ceEEeccCCCeeCCCcchhhHH-HH-HHHHHH---hCCCceE
Confidence 6655 3 3455556555544321 246 8999999999999987332211 11 112222 2334445
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCCCCC------CcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCH
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDPYAR------NEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRL 229 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~------g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~ 229 (309)
.|.+. +.++++|++|+++|++.++..+... +..+++.++..+++.++.+.+.+.+|......
T Consensus 222 ~~~~~---~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------- 289 (356)
T d1rkxa_ 222 IRNPH---AIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ--------- 289 (356)
T ss_dssp CSCTT---CEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE---------
T ss_pred Eeecc---ccccccccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEE---------
Confidence 67776 6789999999999999888754322 23444456778999999999999999764421
Q ss_pred HHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHH
Q 045430 230 EEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKT 304 (309)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~ 304 (309)
.... ..+.+. ....+|++|||+ |||+|++++++|+++|++|||+
T Consensus 290 --~~~~-------------~~~~~~----------------~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~ 334 (356)
T d1rkxa_ 290 --LDGN-------------AHPHEA----------------HYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN 334 (356)
T ss_dssp --C--------------------CC----------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred --EcCC-------------CCCCCc----------------CeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 0000 001111 144689999997 7999999999999999999986
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.90 E-value=2.8e-23 Score=184.17 Aligned_cols=230 Identities=10% Similarity=0.022 Sum_probs=165.9
Q ss_pred HHhccCCCCccEEEEeecccCC-----ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 4 QAKLSKLTDVTHIFYVTWASRP-----TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
++.+.+. +.|+|||+|+.... .+......|+.++.++++++... ..++++.||..+|+.. ..
T Consensus 45 ~~~l~~~-~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~---~~~~~~~ss~~v~~~~---------~~ 111 (281)
T d1vl0a_ 45 NKFFNEK-KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGE---------AK 111 (281)
T ss_dssp HHHHHHH-CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSC---------CS
T ss_pred HHHHHHc-CCCEEEeeccccccccccccchhhcccccccccccccccccc---cccccccccceeeecc---------cc
Confidence 3444432 56999999985433 55778899999999999999875 5689999999999864 35
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
.|.+|+++..| ...|..+++..+...+..+ .+++|+||++||||+++ .... +...+ ..+.++.+.|+
T Consensus 112 ~~~~e~~~~~~--~~~~~~~k~~~e~~~~~~~---~~~~i~R~~~vyG~~~~-~~~~-----~~~~~--~~~~~~~~~~~ 178 (281)
T d1vl0a_ 112 EPITEFDEVNP--QSAYGKTKLEGENFVKALN---PKYYIVRTAWLYGDGNN-FVKT-----MINLG--KTHDELKVVHD 178 (281)
T ss_dssp SCBCTTSCCCC--CSHHHHHHHHHHHHHHHHC---SSEEEEEECSEESSSSC-HHHH-----HHHHH--HHCSEEEEESS
T ss_pred ccccccccccc--hhhhhhhhhHHHHHHHHhC---CCccccceeEEeCCCcc-cccc-----hhhhh--ccCCceeecCC
Confidence 68899987654 3456666666665543456 89999999999999864 2211 11121 13556666665
Q ss_pred ccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHhccHH
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEG 238 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+.++++|++|+++++..+++++. ..+||+++++.+|+.|++..+++.+|.+.... |.+ ..
T Consensus 179 -----~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~-----~i~------~~-- 238 (281)
T d1vl0a_ 179 -----QVGTPTSTVDLARVVLKVIDEKN--YGTFHCTCKGICSWYDFAVEIFRLTGIDVKVT-----PCT------TE-- 238 (281)
T ss_dssp -----CEECCEEHHHHHHHHHHHHHHTC--CEEEECCCBSCEEHHHHHHHHHHHHCCCCEEE-----EEC------ST--
T ss_pred -----ceeccchhhhhhhhhhhhhhhcc--cCceeEeCCCccchHHHHHHHHHHhCCCceEE-----ecc------HH--
Confidence 66999999999999999887643 35999999999999999999999999875421 111 00
Q ss_pred HHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHH
Q 045430 239 VWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMK 303 (309)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r 303 (309)
.++. ...| +....+|++|+++ +||+|+ +.+||++++++|+|
T Consensus 239 -------~~~~---~a~r-------------p~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 239 -------EFPR---PAKR-------------PKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 280 (281)
T ss_dssp -------TSCC---SSCC-------------CSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred -------HcCC---cCCC-------------ccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence 0010 0000 0123579999998 599998 99999999999996
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.90 E-value=1.5e-23 Score=192.61 Aligned_cols=239 Identities=13% Similarity=0.084 Sum_probs=153.0
Q ss_pred CCCCccEEEEeecc-c-CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWA-S-RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLP 86 (309)
Q Consensus 9 ~~~~vd~V~H~A~~-~-~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p 86 (309)
.+.++|+|+|+|+. . ..++.++++.|+.||.|+|++|.+.. +++||||+||+.+++...... .....+|+..
T Consensus 80 ~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~v~~~i~~SS~~~~~~~~~~~-----~~~~~~e~~~ 153 (342)
T d1y1pa1 80 VIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSSTVSALIPKPNV-----EGIYLDEKSW 153 (342)
T ss_dssp TTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECCGGGTCCCCTTC-----CCCEECTTCC
T ss_pred hcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccc-ccccccccccceeeccCCCCC-----CCcccccccc
Confidence 56789999999984 2 33677889999999999999998863 799999999987765431110 1233444431
Q ss_pred C-------------CCc-ccchHH-----HHHHHHHHHHh-cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHH
Q 045430 87 R-------------LNV-TNFYYT-----QEDILFEEVEK-RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAIC 146 (309)
Q Consensus 87 ~-------------~p~-p~~~y~-----~e~~~~~~~~~-~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~ 146 (309)
. .|. |.+-|+ +|+++..+..+ ..+ +.++++||++||||+............+...+.
T Consensus 154 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~---~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~ 230 (342)
T d1y1pa1 154 NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPH---FTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLF 230 (342)
T ss_dssp CHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCS---SEEEEEEESEEECCCSCTTTCCCHHHHHHHHHH
T ss_pred ccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccc---cccceecccceeCCCCCccccccchHHHHHHHH
Confidence 1 111 222355 45555555543 235 889999999999996432111111122222332
Q ss_pred hHhCCceee-cCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCCC
Q 045430 147 KHEGVPLLF-PGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGE 225 (309)
Q Consensus 147 ~~~g~~~~~-~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~~ 225 (309)
.|...+. .++ +.++++||+|+|++++.++.++.+.|+ ||+++++.+||.|+.+.|++.+.....
T Consensus 231 --~g~~~~~~~~~-----~~~~~v~v~Dva~~~i~~l~~~~~~g~-~~~~~~~~~t~~eia~~i~k~~p~~~~------- 295 (342)
T d1y1pa1 231 --NGEVSPALALM-----PPQYYVSAVDIGLLHLGCLVLPQIERR-RVYGTAGTFDWNTVLATFRKLYPSKTF------- 295 (342)
T ss_dssp --TTCCCHHHHTC-----CSEEEEEHHHHHHHHHHHHHCTTCCSC-EEEECCEEECHHHHHHHHHHHCTTSCC-------
T ss_pred --cCCcCcccCCc-----cceeeeeHHHHHHHHHHhhcCccccce-EEEEcCCceEHHHHHHHHHHHcCCCcC-------
Confidence 2444333 333 447999999999999999988766554 667888999999999999998732211
Q ss_pred CCCHHHHHhccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHhcCCCCcCChHHHHHHHHHHHH
Q 045430 226 RVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMK 303 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~lGf~p~~~~~~gl~~t~~~~r 303 (309)
|.. +.. ....... .+...+..+++.+||.|.++++|+++++++.+|
T Consensus 296 ~~~----~~~--------------~~~~~~~--------------~~~~~s~~~~k~lg~~~~~~lee~i~d~I~s~~ 341 (342)
T d1y1pa1 296 PAD----FPD--------------QGQDLSK--------------FDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp CCC----CCC--------------CCCCCCE--------------ECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred Ccc----CCc--------------cCccccc--------------ccchHHHHHHHHcCCCCCcCHHHHHHHHHHhCc
Confidence 110 000 0111111 123345566677999999999999999987543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.84 E-value=1.6e-20 Score=167.00 Aligned_cols=240 Identities=12% Similarity=0.081 Sum_probs=155.0
Q ss_pred HHhccCCCCccEEEEeeccc-----CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 4 QAKLSKLTDVTHIFYVTWAS-----RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
++.++++ +.|+||||||.. ..++...+++|+.++.+++++|++. + .++++.||+.+|+.. ..
T Consensus 47 ~~~i~~~-~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~ss~~~~~~~---------~~ 113 (298)
T d1n2sa_ 47 AETVRKL-RPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET--G-AWVVHYSTDYVFPGT---------GD 113 (298)
T ss_dssp HHHHHHH-CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT--T-CEEEEEEEGGGSCCC---------TT
T ss_pred HHHHHHc-CCCEEEEecccccccccccCccccccccccccccchhhhhcc--c-cccccccccccccCC---------CC
Confidence 3444433 469999999853 3377778999999999999999886 4 578888998898754 36
Q ss_pred CCCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCC
Q 045430 79 TPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGS 158 (309)
Q Consensus 79 ~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~ 158 (309)
.|.+|+++..|. +.|+..+...|........ -.+++.++..++|+++. ....+ ...+ ..+.++...++
T Consensus 114 ~~~~E~~~~~p~--~~y~~~k~~~e~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~-----~~~~--~~~~~~~~~~~ 181 (298)
T d1n2sa_ 114 IPWQETDATSPL--NVYGKTKLAGEKALQDNCP--KHLIFRTSWVYAGKGNN-FAKTM-----LRLA--KERQTLSVIND 181 (298)
T ss_dssp CCBCTTSCCCCS--SHHHHHHHHHHHHHHHHCS--SEEEEEECSEECSSSCC-HHHHH-----HHHH--HHCSEEEEECS
T ss_pred CCCccccccCCC--chHhhhhhhhhhhHHhhhc--ccccccccceeeccCCc-cchhh-----hhhh--cccceeecccc
Confidence 789999986643 4466555554443321220 34455555555565553 22211 1111 12455555554
Q ss_pred ccccccceeccCHHHHHHHHHHHhc---CCCCCCcceeecCCCcccHHHHHHHHHHHhccccCCCCCCC-CCCCHHHHHh
Q 045430 159 KDCWEGYSVASDADLIAEQHIWAAV---DPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDG-ERVRLEEIMR 234 (309)
Q Consensus 159 ~~~~~~~~~~~~vd~la~a~i~aa~---~~~a~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~~~~~~~-~~~~~~~~~~ 234 (309)
+.++++|++|+++++..++. .....+++||+++++.+++.++...+.+..+.......... .|.+
T Consensus 182 -----~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~------ 250 (298)
T d1n2sa_ 182 -----QYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVP------ 250 (298)
T ss_dssp -----CEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEEC------
T ss_pred -----eeecccccchHHHHHHHHHhhhhccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeee------
Confidence 45788999999988766653 23356789999999999999999999888776544221000 0000
Q ss_pred ccHHHHHHHHHHhCCCcccccccchhhHHHHHhhcccccccChhhHHh-cCCCCcCChHHHHHHHHHHHHHC
Q 045430 235 GKEGVWEQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKE-HGFLGFRNSKNSFVNWIDKMKTY 305 (309)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~Kar~-lGf~p~~~~~~gl~~t~~~~r~~ 305 (309)
.. .+. .+..| .....+|++|+++ +||+|. ++++|+++++++|.+.
T Consensus 251 ~~---------~~~---~~a~R-------------P~~~~ld~~K~~~~~~~~~~-~~~~gl~~~i~~~~~~ 296 (298)
T d1n2sa_ 251 TS---------AYP---TPASR-------------PGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTT 296 (298)
T ss_dssp ST---------TSC---CSSCC-------------CSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred hh---------hcC---ccCCC-------------ccccccCHHHHHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence 00 000 00000 1234689999988 699998 9999999999998753
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=2.9e-15 Score=129.58 Aligned_cols=149 Identities=15% Similarity=0.085 Sum_probs=101.6
Q ss_pred HHhccCCCCccEEEEeeccc--CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCC
Q 045430 4 QAKLSKLTDVTHIFYVTWAS--RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPF 81 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~ 81 (309)
.+..+.++++|+|||+|+.. ..+..++.++|+.++.|++++|.+. ++++||++||..+|+..
T Consensus 72 ~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~fi~~Ss~~~~~~~-------------- 135 (232)
T d2bkaa1 72 DDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADKSS-------------- 135 (232)
T ss_dssp GGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTTC--------------
T ss_pred ccccccccccccccccccccccccchhhhhhhcccccceeeeccccc--CccccccCCccccccCc--------------
Confidence 34445667899999999843 2366779999999999999999886 79999999999877632
Q ss_pred CCCCCCCCcccchHHHHHHHHHHHHhcCCCccee-EEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcc
Q 045430 82 TEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLT-WSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKD 160 (309)
Q Consensus 82 ~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~-~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~ 160 (309)
...|...|...|......+ .+ ++||||+.|||+++..... . .+. .+..+ . +++..
T Consensus 136 ----------~~~Y~~~K~~~E~~l~~~~---~~~~~IlRP~~i~G~~~~~~~~--~--~~~---~~~~~-~--~~~~~- 191 (232)
T d2bkaa1 136 ----------NFLYLQVKGEVEAKVEELK---FDRYSVFRPGVLLCDRQESRPG--E--WLV---RKFFG-S--LPDSW- 191 (232)
T ss_dssp ----------SSHHHHHHHHHHHHHHTTC---CSEEEEEECCEEECTTGGGSHH--H--HHH---HHHHC-S--CCTTG-
T ss_pred ----------cchhHHHHHHhhhcccccc---ccceEEecCceeecCCCcCcHH--H--HHH---HHHhh-c--cCCcc-
Confidence 1236666666665543345 54 8999999999987642211 1 011 11111 1 22221
Q ss_pred ccccceeccCHHHHHHHHHHHhcCCCCCCcceeecC
Q 045430 161 CWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSN 196 (309)
Q Consensus 161 ~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~ 196 (309)
.....++++|+|++++.++..+. .++.+.+++
T Consensus 192 ---~~~~~I~~~dvA~a~i~~~~~~~-~~~~~i~~~ 223 (232)
T d2bkaa1 192 ---ASGHSVPVVTVVRAMLNNVVRPR-DKQMELLEN 223 (232)
T ss_dssp ---GGGTEEEHHHHHHHHHHHHTSCC-CSSEEEEEH
T ss_pred ---cCCCeEEHHHHHHHHHHHHhcCc-cCCeEEEcH
Confidence 22345789999999999987764 456777765
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.56 E-value=2.2e-15 Score=133.88 Aligned_cols=173 Identities=10% Similarity=0.049 Sum_probs=121.5
Q ss_pred CCCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
.+++++.+||+++.... ..|..++.++++++.+. +..++++.||..+++. .+..+..
T Consensus 72 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~a~~~--~~~~~v~~Ss~g~~~~---------------~~~~~~~ 128 (312)
T d1qyda_ 72 ALKQVDVVISALAGGVL------SHHILEQLKLVEAIKEA--GNIKRFLPSEFGMDPD---------------IMEHALQ 128 (312)
T ss_dssp HHTTCSEEEECCCCSSS------STTTTTHHHHHHHHHHS--CCCSEEECSCCSSCTT---------------SCCCCCS
T ss_pred hccCcchhhhhhhhccc------ccchhhhhHHHHHHHHh--cCCcEEEEeeccccCC---------------Ccccccc
Confidence 34577999999874322 46788889999999887 4567777777544432 1112211
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceec
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA 168 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~ 168 (309)
| ...++..+..+.++... .+ ++|+++||+.+||+.......... .. ...+.++.++|+++ +.+++
T Consensus 129 ~-~~~~~~~~~~~~~~~~~-~~---~~~~i~r~~~~~g~~~~~~~~~~~------~~-~~~~~~~~~~~~g~---~~~~~ 193 (312)
T d1qyda_ 129 P-GSITFIDKRKVRRAIEA-AS---IPYTYVSSNMFAGYFAGSLAQLDG------HM-MPPRDKVLIYGDGN---VKGIW 193 (312)
T ss_dssp S-TTHHHHHHHHHHHHHHH-TT---CCBCEEECCEEHHHHTTTSSCTTC------CS-SCCSSEECCBTTSC---SEEEE
T ss_pred h-hhhhhHHHHHHHHhhcc-cc---cceEEeccceeecCCccchhhHHH------Hh-hhcccccccccccc---cccce
Confidence 1 13455556666666553 67 999999999999997644322110 00 11245667788887 67999
Q ss_pred cCHHHHHHHHHHHhcCCCCCCcc-eeecCCCcccHHHHHHHHHHHhccccCC
Q 045430 169 SDADLIAEQHIWAAVDPYARNEA-FNCSNGDVFKWKHLWKVLAEQFEIENYG 219 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~~a~g~~-fNI~~g~~~s~~el~~~i~~~~G~~~~~ 219 (309)
++++|+|++++.++.++.+.|+. ||+++++.+|++|+++.+++.+|.+...
T Consensus 194 i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~ 245 (312)
T d1qyda_ 194 VDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDK 245 (312)
T ss_dssp ECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred eeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeE
Confidence 99999999999999888777775 6777788899999999999999977653
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.53 E-value=5.5e-15 Score=125.91 Aligned_cols=161 Identities=12% Similarity=0.051 Sum_probs=105.5
Q ss_pred CCCccEEEEeecccC------------------CChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCcccc
Q 045430 10 LTDVTHIFYVTWASR------------------PTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~------------------~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
++++|.|||+|+... .+.....++|+.|++++++.+... ..+++.+.|+...+...
T Consensus 66 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~---- 139 (252)
T d2q46a1 66 FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTNPD---- 139 (252)
T ss_dssp HTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTCTT----
T ss_pred cccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc--cccccccccccccCCCC----
Confidence 456899999986311 023446799999999999999876 57899999987666421
Q ss_pred CCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 72 GKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
.|.. ..+..+|..++.+.+......+ ++++++||++|||+.+... ..
T Consensus 140 -------~~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~~ilRp~~v~g~~~~~~-~~---------------- 186 (252)
T d2q46a1 140 -------HPLN------KLGNGNILVWKRKAEQYLADSG---TPYTIIRAGGLLDKEGGVR-EL---------------- 186 (252)
T ss_dssp -------CGGG------GGGGCCHHHHHHHHHHHHHHSS---SCEEEEEECEEECSCTTSS-CE----------------
T ss_pred -------cccc------cccccchhhhhhhhhhhhhccc---ccceeecceEEECCCcchh-hh----------------
Confidence 1110 1123345555554444433467 9999999999999976321 10
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCC---cccHHHHHHHHHH
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGD---VFKWKHLWKVLAE 211 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~---~~s~~el~~~i~~ 211 (309)
........+.....+++++|+|++++.++.++.+.|++|||+++. ..+++++.+.+++
T Consensus 187 --~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~ 247 (252)
T d2q46a1 187 --LVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQ 247 (252)
T ss_dssp --EEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTT
T ss_pred --hhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHH
Confidence 000010111133568899999999999998888899999998643 3455555554443
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.51 E-value=2.7e-14 Score=121.29 Aligned_cols=130 Identities=13% Similarity=0.102 Sum_probs=91.5
Q ss_pred CccEEEEeeccc---CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 12 DVTHIFYVTWAS---RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 12 ~vd~V~H~A~~~---~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
++|+|||+++.. ..+..++.++|+.++.|++++|++. +++||+++||..+|+..
T Consensus 62 ~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~~i~~Ss~~~~~~~--------------------- 118 (212)
T d2a35a1 62 SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADAKS--------------------- 118 (212)
T ss_dssp CCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTTC---------------------
T ss_pred chheeeeeeeeeccccccccccccchhhhhhhcccccccc--ccccccccccccccccc---------------------
Confidence 589999998732 3366789999999999999999986 79999999998777531
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcce-eEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCcccccccee
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSL-TWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSV 167 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~-~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~ 167 (309)
.++|...|...|...+..+ + .|+|+||+.|||+.+...+... ...++.....+ ...
T Consensus 119 ---~~~y~~~K~~~E~~l~~~~---~~~~~I~Rp~~v~G~~~~~~~~~~------------~~~~~~~~~~~-----~~~ 175 (212)
T d2a35a1 119 ---SIFYNRVKGELEQALQEQG---WPQLTIARPSLLFGPREEFRLAEI------------LAAPIARILPG-----KYH 175 (212)
T ss_dssp ---SSHHHHHHHHHHHHHTTSC---CSEEEEEECCSEESTTSCEEGGGG------------TTCCCC----C-----HHH
T ss_pred ---ccchhHHHHHHhhhccccc---cccceeeCCcceeCCcccccHHHH------------HHHHHhhccCC-----CCc
Confidence 2357777777666543345 6 4999999999999774322111 11222111111 124
Q ss_pred ccCHHHHHHHHHHHhcCCCC
Q 045430 168 ASDADLIAEQHIWAAVDPYA 187 (309)
Q Consensus 168 ~~~vd~la~a~i~aa~~~~a 187 (309)
.++++|+|++++.++.++..
T Consensus 176 ~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 176 GIEACDLARALWRLALEEGK 195 (212)
T ss_dssp HHHHHHHHHHHHHHHTCCCS
T ss_pred EEEHHHHHHHHHHHHcCCCC
Confidence 58999999999998877543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.47 E-value=1.1e-14 Score=128.15 Aligned_cols=165 Identities=10% Similarity=0.063 Sum_probs=113.6
Q ss_pred CCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLN 89 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p 89 (309)
+++++.|+|+++. .|+.++.++++++..+ +++++++.||...+.. +..+..+
T Consensus 74 ~~~~~~vi~~~~~----------~~~~~~~~~~~a~~~~--~~~~~~~~s~~~~~~~----------------~~~~~~~ 125 (307)
T d1qyca_ 74 VKNVDVVISTVGS----------LQIESQVNIIKAIKEV--GTVKRFFPSEFGNDVD----------------NVHAVEP 125 (307)
T ss_dssp HHTCSEEEECCCG----------GGSGGGHHHHHHHHHH--CCCSEEECSCCSSCTT----------------SCCCCTT
T ss_pred hhhceeeeecccc----------cccchhhHHHHHHHHh--ccccceeeeccccccc----------------ccccccc
Confidence 3467888888763 3556778899999887 6788998887533321 1111111
Q ss_pred cccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceecc
Q 045430 90 VTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVAS 169 (309)
Q Consensus 90 ~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~ 169 (309)
. ..++........+..+ .+ ++++|+||++|||++...+..... ....+.+..++|++. +.++++
T Consensus 126 ~-~~~~~~~~~~~~~~~~-~~---~~~~i~r~~~v~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~~~i 189 (307)
T d1qyca_ 126 A-KSVFEVKAKVRRAIEA-EG---IPYTYVSSNCFAGYFLRSLAQAGL--------TAPPRDKVVILGDGN---ARVVFV 189 (307)
T ss_dssp H-HHHHHHHHHHHHHHHH-HT---CCBEEEECCEEHHHHTTTTTCTTC--------SSCCSSEEEEETTSC---CEEEEE
T ss_pred c-cccccccccccchhhc-cC---CCceecccceecCCCccchhhhhh--------hhhhcccceeeeccc---ccccCC
Confidence 1 1233333333333332 57 999999999999998754432211 011345666778777 779999
Q ss_pred CHHHHHHHHHHHhcCCCCCCc-ceeecCCCcccHHHHHHHHHHHhccccC
Q 045430 170 DADLIAEQHIWAAVDPYARNE-AFNCSNGDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 170 ~vd~la~a~i~aa~~~~a~g~-~fNI~~g~~~s~~el~~~i~~~~G~~~~ 218 (309)
+++|+|++++.++.++...|+ .||+++++.+|+.|+++.+++.+|.+..
T Consensus 190 ~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~ 239 (307)
T d1qyca_ 190 KEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 239 (307)
T ss_dssp CHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred cHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCc
Confidence 999999999988887766665 5677889999999999999999997754
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=2.9e-13 Score=114.52 Aligned_cols=140 Identities=13% Similarity=0.079 Sum_probs=93.5
Q ss_pred CCCCccEEEEeecccCCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~ 88 (309)
.++++|.|||+++...+ .+..++|..+++|++++++++ +++|||++||..+|+.+ ...|
T Consensus 64 al~~~d~vi~~~g~~~~--~~~~~~~~~~~~~l~~aa~~~--~v~r~i~~ss~~~~~~~---------~~~~-------- 122 (205)
T d1hdoa_ 64 TVAGQDAVIVLLGTRND--LSPTTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDP---------TKVP-------- 122 (205)
T ss_dssp HHTTCSEEEECCCCTTC--CSCCCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCT---------TCSC--------
T ss_pred HhcCCCEEEEEeccCCc--hhhhhhhHHHHHHHHHHHHhc--CCCeEEEEeeeeccCCC---------cccc--------
Confidence 35568999999885332 223468899999999999987 79999999999888753 1111
Q ss_pred CcccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceec
Q 045430 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVA 168 (309)
Q Consensus 89 p~p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~ 168 (309)
.....|..++...+...+..+ ++|||+||+.+++-..... ..+...|. ....+
T Consensus 123 -~~~~~~~~~~~~~e~~l~~~~---~~~tiirp~~~~~~~~~~~------------------~~~~~~~~-----~~~~~ 175 (205)
T d1hdoa_ 123 -PRLQAVTDDHIRMHKVLRESG---LKYVAVMPPHIGDQPLTGA------------------YTVTLDGR-----GPSRV 175 (205)
T ss_dssp -GGGHHHHHHHHHHHHHHHHTC---SEEEEECCSEEECCCCCSC------------------CEEESSSC-----SSCSE
T ss_pred -ccccccchHHHHHHHHHHhcC---CceEEEecceecCCCCccc------------------EEEeeCCC-----CCCCc
Confidence 111123232222222222357 9999999999986322111 12222333 33567
Q ss_pred cCHHHHHHHHHHHhcCCCCCCcceeecC
Q 045430 169 SDADLIAEQHIWAAVDPYARNEAFNCSN 196 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~~a~g~~fNI~~ 196 (309)
++++|+|++++.++.++...|+.+.++.
T Consensus 176 i~~~DvA~~~~~~l~~~~~~g~~~~~s~ 203 (205)
T d1hdoa_ 176 ISKHDLGHFMLRCLTTDEYDGHSTYPSH 203 (205)
T ss_dssp EEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred CCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence 8899999999999988887899988874
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.83 E-value=2.3e-09 Score=96.87 Aligned_cols=152 Identities=9% Similarity=-0.103 Sum_probs=94.3
Q ss_pred HhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHhcCCC
Q 045430 32 EVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGP 111 (309)
Q Consensus 32 ~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~~~~~ 111 (309)
..|+.+++|+++|+.++ +++|+++.||...+... +..... +.-..+...|.+ .. ..+
T Consensus 84 ~~~~~~~~~~~~aa~~a--gv~~~v~~Ss~~~~~~~------------~~~~~~---~~~~~k~~~~~~----~~-~~~- 140 (350)
T d1xgka_ 84 GDEIAIGKDLADAAKRA--GTIQHYIYSSMPDHSLY------------GPWPAV---PMWAPKFTVENY----VR-QLG- 140 (350)
T ss_dssp SCHHHHHHHHHHHHHHH--SCCSEEEEEECCCGGGT------------SSCCCC---TTTHHHHHHHHH----HH-TSS-
T ss_pred chhhhhhhHHHHHHHHh--CCCceEEEeeccccccC------------Ccccch---hhhhhHHHHHHH----HH-hhc-
Confidence 46888999999999987 68888888886544321 000001 111122333333 33 356
Q ss_pred cceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC-CceeecCCccccccceeccCH-HHHHHHHHHHhcCC--CC
Q 045430 112 LSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG-VPLLFPGSKDCWEGYSVASDA-DLIAEQHIWAAVDP--YA 187 (309)
Q Consensus 112 ~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g-~~~~~~G~~~~~~~~~~~~~v-d~la~a~i~aa~~~--~a 187 (309)
.+|+++||+..++........... ......| ..+..+++++ ..+.++++ +|+++++..++..+ ..
T Consensus 141 --~~~~~vr~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~i~~~~Dva~~v~~~l~~~~~~~ 209 (350)
T d1xgka_ 141 --LPSTFVYAGIYNNNFTSLPYPLFQ------MELMPDGTFEWHAPFDPD---IPLPWLDAEHDVGPALLQIFKDGPQKW 209 (350)
T ss_dssp --SCEEEEEECEEGGGCBSSSCSSCB------EEECTTSCEEEEESSCTT---SCEEEECHHHHHHHHHHHHHHHCHHHH
T ss_pred --cCceeeeeceeecccccccccccc------ccccccccceeeecccCC---CcceEEEeHHHHHHHHHHHHhCChhhc
Confidence 999999999988753321111000 0000011 1233444444 44666765 78999988777543 35
Q ss_pred CCcceeecCCCcccHHHHHHHHHHHhccccC
Q 045430 188 RNEAFNCSNGDVFKWKHLWKVLAEQFEIENY 218 (309)
Q Consensus 188 ~g~~fNI~~g~~~s~~el~~~i~~~~G~~~~ 218 (309)
.|+.|++++ +.+|+.|+.+.|++.+|.+..
T Consensus 210 ~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~ 239 (350)
T d1xgka_ 210 NGHRIALTF-ETLSPVQVCAAFSRALNRRVT 239 (350)
T ss_dssp TTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred CCeEEEEeC-CcCCHHHHHHHHHHHHCCcce
Confidence 699999996 679999999999999998765
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.31 E-value=0.00063 Score=57.52 Aligned_cols=159 Identities=9% Similarity=0.018 Sum_probs=91.9
Q ss_pred cHHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCcc
Q 045430 2 DTQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 2 ~~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~ 69 (309)
++++.++.+..+|+++|.|+.... +++..+++|+.++.++..++... ..+-.++|++||.......
T Consensus 66 ~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~-- 143 (244)
T d1pr9a_ 66 ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-- 143 (244)
T ss_dssp HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--
T ss_pred HHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc--
Confidence 466778888899999999984322 33456899999988887765431 1134689999997554311
Q ss_pred ccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHH
Q 045430 70 SFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAIC 146 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~ 146 (309)
| ..+. -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|.-+-......... ....+.
T Consensus 144 ----------~------~~~~Y~asKaal~~lt~~lA~el~~~g---IrvN~I~PG~v~T~~~~~~~~~~~---~~~~~~ 201 (244)
T d1pr9a_ 144 ----------T------NHSVYCSTKGALDMLTKVMALELGPHK---IRVNAVNPTVVMTSMGQATWSDPH---KAKTML 201 (244)
T ss_dssp ----------T------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCSHHHHTTSCSHH---HHHHHH
T ss_pred ----------c------chhhhhhhHHHHHHHHHHHHHHhCCCc---EEEEEEeeCcCcChHHhhhccChH---HHHHHH
Confidence 0 0000 02344444444443332 257 999999999886552111111000 001111
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
...|+ | -+...+|+|+++++.+.. ....||++.|.+|-
T Consensus 202 --~~~pl---~---------R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~ 241 (244)
T d1pr9a_ 202 --NRIPL---G---------KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp --TTCTT---C---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --hcCCC---C---------CCcCHHHHHHHHHHHhCchhCCcCCcEEEECccH
Confidence 12222 1 234578899998887753 23569999998763
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.13 E-value=0.004 Score=52.31 Aligned_cols=150 Identities=12% Similarity=-0.009 Sum_probs=85.6
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+++|+|++... ++++.+++|+.|+.++.+++... ..+-.+++.+||....+.+
T Consensus 74 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~---------- 143 (242)
T d1ulsa_ 74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL---------- 143 (242)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT----------
T ss_pred hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCC----------
Confidence 34568999999985322 34557899999999888775432 1134567777764333311
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
. ... ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+-........ ...+ ....|+.
T Consensus 144 ~---------~~~Y~asKaal~~ltk~lA~ela~~g---IrVN~I~PG~v~T~~~~~~~~~~-----~~~~--~~~~pl~ 204 (242)
T d1ulsa_ 144 G---------QANYAASMAGVVGLTRTLALELGRWG---IRVNTLAPGFIETRMTAKVPEKV-----REKA--IAATPLG 204 (242)
T ss_dssp T---------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCTTTSSSCHHH-----HHHH--HHTCTTC
T ss_pred C---------CcchHHHHHHHHHHHHHHHHHHhhhC---cEEEEEeeCcccChhhhcCCHHH-----HHHH--HhcCCCC
Confidence 0 000 12344444333333321 257 99999999998655332221111 1111 1122321
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~ 199 (309)
-+...+|+|+++++.+.. ....||++.|.+|..
T Consensus 205 ------------R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 205 ------------RAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp ------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred ------------CCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence 133577899999888753 235699999988764
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.11 E-value=0.0009 Score=56.49 Aligned_cols=159 Identities=9% Similarity=-0.021 Sum_probs=91.1
Q ss_pred cHHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCcc
Q 045430 2 DTQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 2 ~~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~ 69 (309)
++++.++.+.++|+++|+|++... +++..+++|+.++.++.+++... ...-.++|.+||...+...
T Consensus 64 ~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-- 141 (242)
T d1cyda_ 64 ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-- 141 (242)
T ss_dssp HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--
T ss_pred HHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC--
Confidence 466778888899999999985322 33456899999999888765321 1123589999997544311
Q ss_pred ccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHH
Q 045430 70 SFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAIC 146 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~ 146 (309)
| ..+. ..+|.+.+.+.+..+.+ ..+ +.+..|-|+.|--+-.......- .....+.
T Consensus 142 ----------~------~~~~Y~asKaal~~lt~~lA~e~~~~g---IrvN~I~PG~i~T~~~~~~~~~~---~~~~~~~ 199 (242)
T d1cyda_ 142 ----------P------NLITYSSTKGAMTMLTKAMAMELGPHK---IRVNSVNPTVVLTDMGKKVSADP---EFARKLK 199 (242)
T ss_dssp ----------T------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBTTHHHHHHTCCH---HHHHHHH
T ss_pred ----------C------ccccccchHHHHHHHHHHHHHHhCccC---eecccCCCCCccCHHHHhhcCCH---HHHHHHH
Confidence 0 0000 02333444444433332 257 99999999887544210000000 0111111
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
+ ..|+ .-+...+|+|+++++.+.. ....||++.|.+|-
T Consensus 200 ~--~~pl------------~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 200 E--RHPL------------RKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 239 (242)
T ss_dssp H--HSTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred h--cCCC------------CCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcch
Confidence 1 1222 1234578899998887753 23569999998763
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.05 E-value=0.0032 Score=52.53 Aligned_cols=155 Identities=10% Similarity=0.042 Sum_probs=87.5
Q ss_pred HHHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCcc
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~ 69 (309)
++..++.+..+|+++|.|+.... ++++.+++|+.++.++.+++. +. +-.++|.+||.......
T Consensus 57 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--~~G~ii~i~S~~~~~~~-- 132 (234)
T d1o5ia_ 57 LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK--GWGRIVAITSFSVISPI-- 132 (234)
T ss_dssp HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC--
T ss_pred HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc--ccccccccccccccccc--
Confidence 34455566778999999984322 334567999999877777653 33 34689999987544321
Q ss_pred ccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHH
Q 045430 70 SFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAIC 146 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~ 146 (309)
. ..+. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+.-...+.. .....+.
T Consensus 133 --------~--------~~~~Y~asKaal~~ltk~lA~ela~~g---IrVN~I~PG~v~T~~~~~~~~~----~~~~~~~ 189 (234)
T d1o5ia_ 133 --------E--------NLYTSNSARMALTGFLKTLSFEVAPYG---ITVNCVAPGWTETERVKELLSE----EKKKQVE 189 (234)
T ss_dssp --------T--------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCTTHHHHSCH----HHHHHHH
T ss_pred --------c--------ccccchhHHHHHHHHHHHHHHHhcccC---eEEeecccCccchhhhhhhcCH----HHHHHHH
Confidence 0 0000 02233334333333322 257 9999999998754421111110 0011111
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...|+ .-+...+|+|+++++.+... ...||++.|..|-
T Consensus 190 --~~~pl------------~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 190 --SQIPM------------RRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL 229 (234)
T ss_dssp --TTSTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred --hcCCC------------CCCcCHHHHHHHHHHHhChhhcCCcCcEEEECccc
Confidence 12222 12345788999988877532 3469999998774
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.00 E-value=0.00021 Score=60.98 Aligned_cols=159 Identities=8% Similarity=-0.073 Sum_probs=87.6
Q ss_pred CCCCccEEEEeeccc-CCChHHHHHhHHHHHHHHHHHh----CcCCC-CCceEEEEeCCccccCCccccCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWAS-RPTEAENCEVNGAMLRNVLRSV----IPNAP-NLRHVCLQTGGKHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~-~~~~~~~~~vNv~gt~nll~a~----~~~~~-~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~ 82 (309)
....+|+++|.|+.. ..++++.+++|+.++.++..++ .+... .-.++|.+||...+-.. |
T Consensus 79 ~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~------------~-- 144 (254)
T d2gdza1 79 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------------A-- 144 (254)
T ss_dssp HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------T--
T ss_pred HcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC------------C--
Confidence 344689999999954 4488999999998776665544 33311 12569999997544210 0
Q ss_pred CCCCCCCc-ccchHHHHHHHH-----HHHHhcCCCcceeEEeecCCceecccCCCcchhHH---HHHHHHHHHhHhCCce
Q 045430 83 EDLPRLNV-TNFYYTQEDILF-----EEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVG---TLCVYAAICKHEGVPL 153 (309)
Q Consensus 83 E~~p~~p~-p~~~y~~e~~~~-----~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~---~~~i~~~l~~~~g~~~ 153 (309)
..+. -.+|.+.+.+.+ .... ..+ +.+..|.|+.|--+--......-. .......+.+ .+
T Consensus 145 ----~~~~Y~asKaal~~ltrs~ala~e~~-~~g---IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~----~~ 212 (254)
T d2gdza1 145 ----QQPVYCASKHGIVGFTRSAALAANLM-NSG---VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD----MI 212 (254)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHHHH-TCC---EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH----HH
T ss_pred ----CccchHHHHHHHHHHHHHHHHHHHhc-CCC---EEEEEEEcCCCCChhhhhccccccccccHHHHHHHHh----cC
Confidence 0000 022333333322 1122 357 999999998874321000000000 0000000000 01
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCCcccHH
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWK 203 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~~~s~~ 203 (309)
|. .-+...+|+|+++++++..+...||+..|.+|..+.|.
T Consensus 213 p~----------~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~ 252 (254)
T d2gdza1 213 KY----------YGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ 252 (254)
T ss_dssp HH----------HCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred CC----------CCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeecc
Confidence 11 12345788999999988766567999999999876543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.98 E-value=0.0009 Score=56.31 Aligned_cols=146 Identities=10% Similarity=-0.063 Sum_probs=82.4
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...+|+++|+|++... ++++.+++|+.++.++..++ ++. +-.|+|++||...+...
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~g~Iv~isS~~~~~~~--------- 139 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN--KFGRMIFIGSVSGLWGI--------- 139 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECCCCC-------------
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc--CCCceEEEcchhhccCC---------
Confidence 3468999999985322 34556899999987776544 443 34699999997554211
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
+..+. -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|.-+-....... ..+......
T Consensus 140 ---------~~~~~Y~asKaal~~lt~~lA~e~~~~g---IrVN~I~PG~v~T~~~~~~~~~---------~~~~~~~~~ 198 (237)
T d1uzma1 140 ---------GNQANYAASKAGVIGMARSIARELSKAN---VTANVVAPGYIDTDMTRALDER---------IQQGALQFI 198 (237)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHHSCHH---------HHHHHGGGC
T ss_pred ---------cccHHHHHHHHHHHHHHHHHHhhhhcCC---ceeeeeeeCcCCChhhhccCHH---------HHHHHHhcC
Confidence 00000 12344444444433332 257 9999999998854321111000 001000111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
|. .-+...+|+|+++++.+... ...||++.|.+|
T Consensus 199 pl----------~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG 234 (237)
T d1uzma1 199 PA----------KRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 234 (237)
T ss_dssp TT----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CC----------CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 11 12346788999998887532 356999999877
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.94 E-value=0.0022 Score=54.62 Aligned_cols=155 Identities=12% Similarity=0.007 Sum_probs=84.9
Q ss_pred ccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCC
Q 045430 7 LSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
++...++|+++|.|++..+ ++++.+++|+.|+.++.+++. +.. .=.++|++||...+..
T Consensus 80 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~~Iv~isS~~~~~~------- 151 (261)
T d1geea_ 80 IKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND-IKGTVINMSSVHEKIP------- 151 (261)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCCEEEEECCGGGTSC-------
T ss_pred HHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccc-ccccccccccchhccc-------
Confidence 3344578999999985322 334568999999888876653 332 2245888888744321
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
. |..+. -.+|-+.+.+.+..+.+ ..+ +.+..|-|+.|--|-...... .-.....+. ..
T Consensus 152 -----~------~~~~~Y~asKaal~~lt~~lA~e~~~~g---IrVN~I~PG~v~T~~~~~~~~---~~~~~~~~~--~~ 212 (261)
T d1geea_ 152 -----W------PLFVHYAASKGGMKLMTETLALEYAPKG---IRVNNIGPGAINTPINAEKFA---DPEQRADVE--SM 212 (261)
T ss_dssp -----C------TTCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCSGGGHHHHH---SHHHHHHHH--TT
T ss_pred -----C------ccccccccCCccchhhHHHHHHHhhhhC---cEEEEEeeCcCcCHhHhhhcC---CHHHHHHHH--hc
Confidence 0 00000 02233333333332221 257 999999999886442111000 000111111 11
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.|+. -+...+|+|+++++.+... ...||+++|.+|..+
T Consensus 213 ~pl~------------R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl 252 (261)
T d1geea_ 213 IPMG------------YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL 252 (261)
T ss_dssp CTTS------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCC------------CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence 2221 1345788999988887532 356999999988643
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=96.93 E-value=0.00092 Score=56.66 Aligned_cols=160 Identities=8% Similarity=-0.088 Sum_probs=86.9
Q ss_pred ccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCC
Q 045430 7 LSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
++....+|.++|.|++..+ +++..+++|+.|+.++.+++... ..+=.++|++||...+-..
T Consensus 71 ~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~-------- 142 (248)
T d2d1ya1 71 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-------- 142 (248)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC--------
T ss_pred HHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc--------
Confidence 3344578999999985322 33456899999999988886432 1134689999998655311
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHH-HHHHHHHhHhCC
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTL-CVYAAICKHEGV 151 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~-~i~~~l~~~~g~ 151 (309)
|..+. -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--|. ....... .......+..-.
T Consensus 143 ----------~~~~~Y~asKaal~~ltk~lA~el~~~g---IrVN~I~PG~v~T~~----~~~~~~~~~~~~~~~~~~~~ 205 (248)
T d2d1ya1 143 ----------QENAAYNASKGGLVNLTRSLALDLAPLR---IRVNAVAPGAIATEA----VLEAIALSPDPERTRRDWED 205 (248)
T ss_dssp ----------TTBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHH----HHHHHC--------CHHHHT
T ss_pred ----------cccchhHHHHHHHHHHHHHHHHHhhhhC---cEEEEEeeCCCCCch----HHHHhhcCCCHHHHHHHHHh
Confidence 00000 02333433333333321 257 999999998774431 1100000 000000000000
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCccc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVFK 201 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~s 201 (309)
..| +.-+...+|+|+++.+.+.. ....||++.|..|-.-|
T Consensus 206 ~~p----------l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~tas 247 (248)
T d2d1ya1 206 LHA----------LRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS 247 (248)
T ss_dssp TST----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred cCC----------CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence 011 11244688899998888753 23569999998876543
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=96.89 E-value=0.0015 Score=55.09 Aligned_cols=153 Identities=15% Similarity=0.076 Sum_probs=88.7
Q ss_pred hccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCC
Q 045430 6 KLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 6 ~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
.++...++|+++|.|+.... +++..+++|+.++.++.+++... + +=.++|++||...+-..
T Consensus 72 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~~~~~------ 144 (243)
T d1q7ba_ 72 IRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSVVGTMGN------ 144 (243)
T ss_dssp HHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC------
T ss_pred hhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeecchhhcCCC------
Confidence 33455678999999984322 33456899999999988877432 1 23689999998655311
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
+ ..+. ..+|.+.+-+.+..+.+ ..+ +.+..|.|+.|--+-........ ...+. ..
T Consensus 145 ----~--------~~~~Y~asKaal~~lt~~lA~ela~~g---IrVN~I~PG~i~T~~~~~~~~~~-----~~~~~--~~ 202 (243)
T d1q7ba_ 145 ----G--------GQANYAAAKAGLIGFSKSLAREVASRG---ITVNVVAPGFIETDMTRALSDDQ-----RAGIL--AQ 202 (243)
T ss_dssp ----T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCHHHHTSCHHH-----HHHHH--TT
T ss_pred ----C--------CCHHHHHHHHHHHHHHHHHHHHhCccC---eEEEEEecceEechhhhhhhhhH-----HHHHH--hc
Confidence 0 0001 12344444444333322 257 99999999887443211111110 11111 11
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.|+ .-+...+|+|+++.+.+... ...||+.+|.+|-.
T Consensus 203 ~pl------------~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~ 241 (243)
T d1q7ba_ 203 VPA------------GRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMY 241 (243)
T ss_dssp CTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred CCC------------CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeE
Confidence 221 12346788999998887532 35699999988743
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.88 E-value=0.0034 Score=53.01 Aligned_cols=155 Identities=12% Similarity=0.011 Sum_probs=87.1
Q ss_pred cCCCCccEEEEeeccc---CC-------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCC
Q 045430 8 SKLTDVTHIFYVTWAS---RP-------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~---~~-------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
+...++|+++|.|+.. .+ ++++.+++|+.++.++.+++. +. +-.++|++||...+...
T Consensus 67 ~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~--~~G~IV~isS~~~~~~~------ 138 (252)
T d1zmta1 67 SAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR--KSGHIIFITSATPFGPW------ 138 (252)
T ss_dssp HHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCSTTTSCC------
T ss_pred HHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc--ccceeeccccccccccc------
Confidence 3445689999999742 22 234466899999888777653 33 23689999998655321
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHH---HHHHHHHHHh
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVG---TLCVYAAICK 147 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~---~~~i~~~l~~ 147 (309)
|..+. ..+|-+.+.+.+..+.+ ..+ +.+..|.|+.|-.+.......... .-.....+.+
T Consensus 139 ------------~~~~~Y~asKaal~~lt~~lA~ela~~g---IrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~ 203 (252)
T d1zmta1 139 ------------KELSTYTSARAGACTLANALSKELGEYN---IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK 203 (252)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGT---CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH
T ss_pred ------------ccccccccccccHHHHHHHHHHHhcccC---cEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHh
Confidence 00000 02333333333333321 257 999999999987654322211000 0000111111
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
..|+. =+...+|+|+++++.+... ...||+..|.+|-.
T Consensus 204 --~~pl~------------R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 204 --VTALQ------------RLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp --HSSSS------------SCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred --cCCCC------------CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence 12221 1345788999999888543 24699999998854
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=96.86 E-value=0.0022 Score=54.18 Aligned_cols=151 Identities=11% Similarity=-0.021 Sum_probs=83.8
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
+...++|+++|+|+.... ++++.+++|+.|+.++.+++ ++.+. =.++|++||...+-.
T Consensus 78 ~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~-gg~Ii~isS~~~~~~-------- 148 (251)
T d1zk4a1 78 KAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL-GASIINMSSIEGFVG-------- 148 (251)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS-CEEEEEECCGGGTSC--------
T ss_pred HHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCC-CCceEeeeccceecc--------
Confidence 344578999999984322 33446799999998887775 33321 147899998754321
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHH----hcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHh
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVE----KRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHE 149 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~----~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~ 149 (309)
.| ..+. -.+|.+.+.+.+..+. ...+ +.+..|.|+.|-.+.-......- .... .
T Consensus 149 ----~~------~~~~Y~asKaal~~lt~~lA~e~~l~~~g---IrVN~I~PG~i~T~~~~~~~~~~-------~~~~-~ 207 (251)
T d1zk4a1 149 ----DP------SLGAYNASKGAVRIMSKSAALDCALKDYD---VRVNTVHPGYIKTPLVDDLPGAE-------EAMS-Q 207 (251)
T ss_dssp ----CT------TCHHHHHHHHHHHHHHHHHHHHHHHTTCS---EEEEEEEECCBCCHHHHTSTTHH-------HHHT-S
T ss_pred ----CC------CchhHHHHHHHHhcchHHHHHHHhcCCCc---EEEEEEeCCCCCChhHHhcCCHH-------HHHH-H
Confidence 00 0000 0223333333332222 1357 99999999988654221111100 0000 0
Q ss_pred CCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 150 GVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 150 g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
....|. .-+...+|+|+++++.+... ...||.+.|.+|-
T Consensus 208 ~~~~pl----------~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 248 (251)
T d1zk4a1 208 RTKTPM----------GHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY 248 (251)
T ss_dssp TTTCTT----------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HhCCCC----------CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECccc
Confidence 011111 12456889999998887532 3569999998763
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.85 E-value=0.002 Score=54.42 Aligned_cols=145 Identities=11% Similarity=0.045 Sum_probs=85.6
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
....+|+++|+|+.... ++++.+++|+.|+.++.+++... + +=.++|++||...+-..
T Consensus 77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~~--------- 146 (244)
T d1nffa_ 77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAGT--------- 146 (244)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC---------
T ss_pred HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEecccccccccc---------
Confidence 34568999999984322 34557899999999888765322 1 23589999998654211
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
| ..+. ..+|.+.+.+.+..+.+ ..+ +.+..|-|+.|--|-..... + .-...
T Consensus 147 ---~------~~~~Y~asKaal~~ltk~lA~el~~~g---IrVN~I~PG~i~T~~~~~~~-------------~-~~~~~ 200 (244)
T d1nffa_ 147 ---V------ACHGYTATKFAVRGLTKSTALELGPSG---IRVNSIHPGLVKTPMTDWVP-------------E-DIFQT 200 (244)
T ss_dssp ---T------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCSGGGTTSC-------------T-TCSCC
T ss_pred ---c------cccchhhHHHHHHHHHHHHHHHhcccC---EEEEEEeeCCccChhHhhhh-------------H-HHHhc
Confidence 0 0001 12344444443333321 257 99999999887544211110 0 00011
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
| ..-+...+|+|+++++.+... ...||++.|..|..
T Consensus 201 p----------l~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~ 238 (244)
T d1nffa_ 201 A----------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTV 238 (244)
T ss_dssp S----------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred c----------ccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCee
Confidence 1 112456889999998888532 35699999987754
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.82 E-value=0.0021 Score=54.38 Aligned_cols=149 Identities=11% Similarity=0.060 Sum_probs=85.9
Q ss_pred ccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCC
Q 045430 7 LSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
++....+|+++|.|+.... +++..+++|+.++.++..++. +. +-.++|++||...+-..
T Consensus 82 ~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~~G~IVnisS~~~~~~~------ 153 (251)
T d2c07a1 82 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN--RYGRIINISSIVGLTGN------ 153 (251)
T ss_dssp HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH--TCEEEEEECCTHHHHCC------
T ss_pred HHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC--CCeEEEEECCHHhcCCC------
Confidence 3455678999999984211 345567999999988877653 33 34689999997655211
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
|..+. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+-........ ...+. ..
T Consensus 154 ------------~~~~~Y~asKaal~~ltr~lA~el~~~g---IrVN~V~PG~v~T~~~~~~~~~~-----~~~~~--~~ 211 (251)
T d2c07a1 154 ------------VGQANYSSSKAGVIGFTKSLAKELASRN---ITVNAIAPGFISSDMTDKISEQI-----KKNII--SN 211 (251)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCC-----CCHHH-----HHHHH--TT
T ss_pred ------------CCCHHHHHHHHHHHHHHHHHHHHhhhhC---eEEEEEccCCEecccccccCHHH-----HHHHH--hc
Confidence 00000 02344444444443332 257 99999999998765332222111 11111 12
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
.|+. -+...+|+|+++++.+... ...||+..|.+|
T Consensus 212 ~pl~------------R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 212 IPAG------------RMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp CTTS------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCC------------CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 2221 1345778999988877532 356999999876
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.0024 Score=54.18 Aligned_cols=153 Identities=13% Similarity=0.076 Sum_probs=87.0
Q ss_pred cCCCCccEEEEeecccCC--------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP--------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
+...++|+++|+|+.... +++..+++|+.|+.++.+++... ..+=.++|++||...+...
T Consensus 84 ~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~---------- 153 (255)
T d1fmca_ 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN---------- 153 (255)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------
T ss_pred HHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc----------
Confidence 344568999999985322 34456899999998888765432 0023578999887544311
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
|..+. ..+|.+.+.+.+..+.+ ..+ +.+..|-|+.|--+.-...++- .....+. ...|+.
T Consensus 154 --------~~~~~Y~asKaal~~lt~~lA~el~~~g---IrVN~I~PG~i~T~~~~~~~~~----e~~~~~~--~~~pl~ 216 (255)
T d1fmca_ 154 --------INMTSYASSKAAASHLVRNMAFDLGEKN---IRVNGIAPGAILTDALKSVITP----EIEQKML--QHTPIR 216 (255)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHHHTTT---EEEEEEEECSBCSHHHHTTCCH----HHHHHHH--HTCSSC
T ss_pred --------cccccchhHHHHHHHHHHHHHHHhCccC---eEEEEeeeCcCcChHhhccCCH----HHHHHHH--hcCCCC
Confidence 00000 02333333333333321 257 9999999998865532111111 1111221 123331
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
-+...+|+|+++++.+... ...||+..|.+|..
T Consensus 217 ------------R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~ 251 (255)
T d1fmca_ 217 ------------RLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_dssp ------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred ------------CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence 1335788999988887532 35699999998863
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.81 E-value=0.0035 Score=52.95 Aligned_cols=153 Identities=11% Similarity=0.009 Sum_probs=82.5
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|+++|+|++... +++..+++|+.|+.++.+++... ..+-.++|++||....-.+
T Consensus 80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~---------- 149 (251)
T d1vl8a_ 80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT---------- 149 (251)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC----------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc----------
Confidence 34568999999985322 33456799999998887775322 0133589999986432111
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
.| .... -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+-.......- .....+. ...|+.
T Consensus 150 -~~------~~~~Y~asKaal~~lt~~lA~e~~~~g---IrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~--~~~pl~ 214 (251)
T d1vl8a_ 150 -MP------NISAYAASKGGVASLTKALAKEWGRYG---IRVNVIAPGWYRTKMTEAVFSDP---EKLDYML--KRIPLG 214 (251)
T ss_dssp -SS------SCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBCSTTTHHHHTCH---HHHHHHH--HTCTTS
T ss_pred -Cc------cccchHHHHHhHHHHHHHHHHHhcccC---eEEEEEeeCcccCHHHHhccCCH---HHHHHHH--hcCCCC
Confidence 00 0000 02233333333333221 257 99999999988554321111000 0111111 123321
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
-+...+|+|+++++.+.. ....||++.|.+|-
T Consensus 215 ------------R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 215 ------------RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp ------------SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ------------CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCe
Confidence 123466789888887753 23569999998764
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.79 E-value=0.0016 Score=55.07 Aligned_cols=98 Identities=10% Similarity=-0.046 Sum_probs=61.7
Q ss_pred hccCCCCccEEEEeecccCC------ChH---HHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccc-cCCccccCCCC
Q 045430 6 KLSKLTDVTHIFYVTWASRP------TEA---ENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHY-VGPFESFGKIR 75 (309)
Q Consensus 6 ~~~~~~~vd~V~H~A~~~~~------~~~---~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vY-G~~~~~~~~~~ 75 (309)
.+.+..++|.|+|+|+.... +++ ..+++|+.|+.++.+++... +..+||++||.... |.+
T Consensus 83 ~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~--~~~~iv~~SS~a~~~g~~-------- 152 (259)
T d2fr1a1 83 GIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAP-------- 152 (259)
T ss_dssp TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCT--------
T ss_pred cccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc--CCceEeeecchhhccCCc--------
Confidence 34444479999999984322 333 35689999999999999876 56799999997654 321
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccC
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSP 129 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~ 129 (309)
.. .. -.+|-..+.+..+... .| ++++.|.|+.|.+++.
T Consensus 153 --~~---------~~YaAaka~l~~la~~~~~--~G---i~v~~I~pg~~~~~g~ 191 (259)
T d2fr1a1 153 --GL---------GGYAPGNAYLDGLAQQRRS--DG---LPATAVAWGTWAGSGM 191 (259)
T ss_dssp --TC---------TTTHHHHHHHHHHHHHHHH--TT---CCCEEEEECCBC----
T ss_pred --cc---------HHHHHHHHhHHHHHHHHHh--CC---CCEEECCCCcccCCcc
Confidence 10 00 0123333444444333 57 9999999999887653
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.78 E-value=0.0017 Score=55.09 Aligned_cols=146 Identities=9% Similarity=-0.046 Sum_probs=85.1
Q ss_pred CCCCccEEEEeecc-cCCChHHHHHhHHHHHHHHHHHhCc----C-CCCCceEEEEeCCccccCCccccCCCCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWA-SRPTEAENCEVNGAMLRNVLRSVIP----N-APNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFT 82 (309)
Q Consensus 9 ~~~~vd~V~H~A~~-~~~~~~~~~~vNv~gt~nll~a~~~----~-~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~ 82 (309)
....+|+++++|+. ...++++.+++|+.|+.++..++.. . ...-.++|++||...+...
T Consensus 81 ~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~--------------- 145 (254)
T d1sbya1 81 QLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI--------------- 145 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---------------
T ss_pred HcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC---------------
Confidence 34568999999995 4558899999999998888776543 2 1124679999997665321
Q ss_pred CCCCCCCcccchHHHHH-----H---HHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 83 EDLPRLNVTNFYYTQED-----I---LFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 83 E~~p~~p~p~~~y~~e~-----~---~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
|. ..-|...| + ++.... ..+ +.+..|-|+.|.-+-..+..... .
T Consensus 146 ------~~-~~~Y~asKaal~~~t~~la~el~-~~g---IrVn~I~PG~v~T~~~~~~~~~~-----------------~ 197 (254)
T d1sbya1 146 ------HQ-VPVYSASKAAVVSFTNSLAKLAP-ITG---VTAYSINPGITRTPLVHTFNSWL-----------------D 197 (254)
T ss_dssp ------TT-SHHHHHHHHHHHHHHHHHHHHHH-HHS---EEEEEEEECSEESHHHHSCCCGG-----------------G
T ss_pred ------CC-CHHHHHHHHHHHHHHHHHHhhcc-ccC---eEEEEEEeCCCcCccccccccch-----------------h
Confidence 11 11244333 2 222222 257 99999999999765111100000 0
Q ss_pred ecCCccccccceeccCHHHHHHHHHHHhcCCCCCCcceeecCCC
Q 045430 155 FPGSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGD 198 (309)
Q Consensus 155 ~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~a~g~~fNI~~g~ 198 (309)
....-......+.....+++|++++++.... ..|+++.|..|.
T Consensus 198 ~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~-~tG~vi~vdgG~ 240 (254)
T d1sbya1 198 VEPRVAELLLSHPTQTSEQCGQNFVKAIEAN-KNGAIWKLDLGT 240 (254)
T ss_dssp SCTTHHHHHTTSCCEEHHHHHHHHHHHHHHC-CTTCEEEEETTE
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHhhhCC-CCCCEEEECCCE
Confidence 0000000000112234777898888877643 478999988874
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=96.75 E-value=0.0015 Score=55.13 Aligned_cols=151 Identities=11% Similarity=0.030 Sum_probs=85.5
Q ss_pred ccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCC
Q 045430 7 LSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
++...++|+++|.|+.... +++..+++|+.++.++.+++... + +=.++|++||...+-..
T Consensus 74 ~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~~~~~------- 145 (244)
T d1edoa_ 74 IDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVGLIGN------- 145 (244)
T ss_dssp HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCC-------
T ss_pred HHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcChhhcCCC-------
Confidence 3445678999999984321 34557899999998887776432 1 23689999998654211
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
... +. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+-....... ....+. ...
T Consensus 146 --~~~---------~~Y~asKaal~~ltk~lA~el~~~g---IrvN~I~PG~i~T~~~~~~~~~-----~~~~~~--~~~ 204 (244)
T d1edoa_ 146 --IGQ---------ANYAAAKAGVIGFSKTAAREGASRN---INVNVVCPGFIASDMTAKLGED-----MEKKIL--GTI 204 (244)
T ss_dssp --TTC---------HHHHHHHHHHHHHHHHHHHHHHTTT---EEEEEEEECSBCSHHHHTTCHH-----HHHHHH--TSC
T ss_pred --CCC---------HHHHHHHHHHHHChHHHHHHHhhhC---cEEEEEecceeccHHHHHhhHH-----HHHHHH--hcC
Confidence 000 01 02233333333332221 257 9999999988754321111110 111111 112
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCCC---CCCcceeecCCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDPY---ARNEAFNCSNGD 198 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~~---a~g~~fNI~~g~ 198 (309)
|+ .-+...+|+|+++.+.+..+. ..||+..|.+|-
T Consensus 205 pl------------~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 205 PL------------GRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp TT------------CSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred CC------------CCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence 22 123457889999988764443 469999998774
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=96.72 E-value=0.005 Score=52.35 Aligned_cols=160 Identities=12% Similarity=0.051 Sum_probs=87.8
Q ss_pred cCCCCccEEEEeeccc--CC------C---hHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCC
Q 045430 8 SKLTDVTHIFYVTWAS--RP------T---EAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~--~~------~---~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
+....+|+++|+|+.. .+ + ++..+++|+.|+.++.+++... ..+-.++|++||...+-..
T Consensus 78 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~------- 150 (268)
T d2bgka1 78 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG------- 150 (268)
T ss_dssp HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-------
T ss_pred HHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc-------
Confidence 3445789999999842 11 2 3446799999988887765322 0033589999887554211
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
.+. .+. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|-.|--...+..-.. ......+ ...
T Consensus 151 ----~~~------~~~Y~asKaal~~lt~~lA~el~~~g---IrVN~I~PG~i~T~~~~~~~~~~~~--~~~~~~~-~~~ 214 (268)
T d2bgka1 151 ----EGV------SHVYTATKHAVLGLTTSLCTELGEYG---IRVNCVSPYIVASPLLTDVFGVDSS--RVEELAH-QAA 214 (268)
T ss_dssp ----TTS------CHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESCCSCCCCTTSSSCCHH--HHHHHHH-HTC
T ss_pred ----ccc------ccccchhHHHHHhCHHHHHHHhChhC---eEEEecCCCCccChHHhhhhcCCHH--HHHHHHH-hcc
Confidence 000 000 02233333333333321 257 9999999999977643322211000 0001111 111
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCccc
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVFK 201 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~s 201 (309)
+ + .| -+...+|+|+++++.+.. ....||++.|.+|-..+
T Consensus 215 ~-~-~g---------r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~ 255 (268)
T d2bgka1 215 N-L-KG---------TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT 255 (268)
T ss_dssp S-S-CS---------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred c-c-CC---------CCcCHHHHHHHHHHHhChhhCCccCceEEECcCcccC
Confidence 1 1 11 134578899999988853 23569999999886543
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=96.71 E-value=0.0051 Score=52.08 Aligned_cols=151 Identities=12% Similarity=0.073 Sum_probs=84.6
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+++|+|++... ++++.+++|+.++.++.+++... ..+-.++|++||...+...
T Consensus 76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~---------- 145 (254)
T d1hdca_ 76 EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL---------- 145 (254)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred HcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc----------
Confidence 34568999999985322 33457899999999988876422 0134699999998554311
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLL 154 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~ 154 (309)
| ..+. ..+|.+.+.+.+..+.+ ..+ +.+..|-|+.|.-+ +.. + .....
T Consensus 146 --~------~~~~Y~asKaal~~lt~~lA~e~a~~g---IrVN~I~PG~v~T~----~~~------------~-~~~~~- 196 (254)
T d1hdca_ 146 --A------LTSSYGASKWGVRGLSKLAAVELGTDR---IRVNSVHPGMTYTP----MTA------------E-TGIRQ- 196 (254)
T ss_dssp --T------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCH----HHH------------H-HTCCC-
T ss_pred --c------chhhHHHHHHHHHHHHHHHHHHhCCCc---eEEEEeeeCcccCc----cch------------h-cCHHH-
Confidence 0 0001 12344444443333322 257 99999999988432 110 0 01000
Q ss_pred ecCCccccccc-eeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 155 FPGSKDCWEGY-SVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 155 ~~G~~~~~~~~-~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.-..... ... |--+..+|+|+++++.+... ...||++.|.+|-.
T Consensus 197 ~~~~~~~-~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t 243 (254)
T d1hdca_ 197 GEGNYPN-TPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp STTSCTT-STTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHhC-CCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence 0000000 000 11135789999998887532 35699999998753
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=96.69 E-value=0.0029 Score=53.28 Aligned_cols=153 Identities=7% Similarity=0.010 Sum_probs=81.4
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
+...++|+++|.|++... +++..+++|+.|+.++.+++... ..+-.++|++||.......
T Consensus 76 ~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~--------- 146 (247)
T d2ew8a1 76 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI--------- 146 (247)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC---------
T ss_pred HHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC---------
Confidence 344568999999985322 44557899999999888876432 0023689999997544210
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
|..+. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+.-....... ....+ ...-.|+
T Consensus 147 ---------~~~~~Y~asKaal~~ltk~lA~ela~~g---IrVN~I~PG~i~T~~~~~~~~~~----~~~~~-~~~~~~l 209 (247)
T d2ew8a1 147 ---------EAYTHYISTKAANIGFTRALASDLGKDG---ITVNAIAPSLVRTATTEASALSA----MFDVL-PNMLQAI 209 (247)
T ss_dssp ---------SSCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCC-----------------------CTTSSS
T ss_pred ---------cccccchhhhccHHHHHHHHHHHhcccC---eEEEEEeeCCCCCccccccccch----hHHHH-HHHhccC
Confidence 00000 02333333333333321 257 99999999988654321110000 00000 0000111
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
.-+...+|+|+++++.+... ...||+..|.+|-
T Consensus 210 ------------~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 210 ------------PRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp ------------CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred ------------CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCE
Confidence 12345788999988877532 3469999998774
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.66 E-value=0.006 Score=51.46 Aligned_cols=162 Identities=14% Similarity=0.100 Sum_probs=85.7
Q ss_pred ccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCC
Q 045430 7 LSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
.+...++|+++|+|++... +++..+++|+.|+.++.+++. +.+ .-.++|++||...+...
T Consensus 73 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~~g~Iv~isS~~~~~~~------ 145 (255)
T d1gega_ 73 RKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG-HGGKIINACSQAGHVGN------ 145 (255)
T ss_dssp HHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCGGGTSCC------
T ss_pred HHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhc-cccccccccchhhcccC------
Confidence 3445678999999985322 335578999999999887753 222 34679999987544211
Q ss_pred CCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g 150 (309)
| ..+. -.+|-+.+.+.+..+.+ ..+ +.+..|.|+.|--| +.... ........+
T Consensus 146 ------~------~~~~Y~asKaal~~ltk~lA~el~~~g---IrVN~I~PG~i~T~----~~~~~-----~~~~~~~~~ 201 (255)
T d1gega_ 146 ------P------ELAVYSSSKFAVRGLTQTAARDLAPLG---ITVNGYCPGIVKTP----MWAEI-----DRQVSEAAG 201 (255)
T ss_dssp ------T------TBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBSSH----HHHHH-----HHHHHHHHT
T ss_pred ------c------ccccchhCHHHHHhhHHHHHHHhhhhC---cEEEEEecCcccCh----HHhhh-----hhhhHhhhc
Confidence 0 0000 02233333333333321 257 99999999987432 11110 000000011
Q ss_pred CceeecCCc-cccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 151 VPLLFPGSK-DCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 151 ~~~~~~G~~-~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.+....-.. ....-..-+...+|+|+++++.+... ...||+++|.+|-.
T Consensus 202 ~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 202 KPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp CCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred ccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence 110000000 00001122456889999998888532 34699999988754
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=96.55 E-value=0.0063 Score=51.53 Aligned_cols=152 Identities=8% Similarity=-0.052 Sum_probs=83.5
Q ss_pred CccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 12 ~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.+|+++|.|+.... +++..+++|+.|+.++.+++... ..+-.++|++||....... |
T Consensus 86 ~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------------~ 153 (259)
T d2ae2a_ 86 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV------------P 153 (259)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC------------T
T ss_pred CceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc------------c
Confidence 48999999984322 33457899999998887765432 0123689999997544211 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
..+. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+.-.........-.....+. ...|+.
T Consensus 154 ------~~~~Y~asKaal~~lt~~lA~el~~~g---IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~--~~~pl~--- 219 (259)
T d2ae2a_ 154 ------YEAVYGATKGAMDQLTRCLAFEWAKDN---IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI--DRCALR--- 219 (259)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHTGGGT---EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH--HTSTTC---
T ss_pred ------cccchHHHHHHHHHHHHHHHHHhCcCc---eEEEEeeeCcccCHHHHhhhhchhhHHHHHHHH--hcCCCC---
Confidence 0000 02344444444444432 256 999999998885432110000000000111111 122321
Q ss_pred CccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
-+...+|+|+++++.+... ...||+..|.+|-
T Consensus 220 ---------R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 220 ---------RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp ---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ---------CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence 1345788999988877532 3569999998774
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.52 E-value=0.0039 Score=52.71 Aligned_cols=153 Identities=9% Similarity=-0.018 Sum_probs=81.1
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
....+|+++|+|+.... +++..+++|+.++.++..++... ..+ .++|++||...+-..
T Consensus 77 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~---------- 145 (253)
T d1hxha_ 77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI---------- 145 (253)
T ss_dssp HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC----------
T ss_pred HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCc----------
Confidence 34568999999984322 34557899998888776664322 113 689999997544210
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHH----HHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILF----EEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~----~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
|..+. ..+|.+.+.+.+ |+..+..+ +.+..|-|+.|--+--...++.- ....... ...+
T Consensus 146 --------~~~~~Y~asKaal~~lt~~lA~e~~~~g~~---IrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~-~~~~ 209 (253)
T d1hxha_ 146 --------EQYAGYSASKAAVSALTRAAALSCRKQGYA---IRVNSIHPDGIYTPMMQASLPKG----VSKEMVL-HDPK 209 (253)
T ss_dssp --------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCC---EEEEEEEESEECCHHHHHHSCTT----CCHHHHB-CBTT
T ss_pred --------cccccccchhHHHHHHHHHHHHHHhhcCCC---EEEEEEeECCCcCHhHHhhCcch----hhHHHHH-hCcc
Confidence 00000 022333333333 22222246 88999999988543110000000 0000000 0000
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCC
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNG 197 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g 197 (309)
+. ..--+...+|+|+++++.+... ...||+.+|.+|
T Consensus 210 ~~---------~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 210 LN---------RAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp TB---------TTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred cc---------ccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 00 1113456889999999888532 356999999766
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0045 Score=53.64 Aligned_cols=156 Identities=6% Similarity=-0.056 Sum_probs=85.5
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
+...++|+++|.|+.... +++..+++|+.|+.++.+++... ..+-.++|.+||....+.
T Consensus 90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~---------- 159 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---------- 159 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC----------
T ss_pred HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc----------
Confidence 344578999999984322 34557899999998888776432 012356777766432221
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCce
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPL 153 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~ 153 (309)
| .... ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|.-+.....+.... - ...+..-...
T Consensus 160 ---~------~~~~Y~asKaal~~ltk~lA~el~~~g---IrVN~I~PG~i~T~~~~~~~~~~~-~----~~~~~~~~~~ 222 (297)
T d1yxma1 160 ---P------LAVHSGAARAGVYNLTKSLALEWACSG---IRINCVAPGVIYSQTAVENYGSWG-Q----SFFEGSFQKI 222 (297)
T ss_dssp ---T------TCHHHHHHHHHHHHHHHHHHHHTGGGT---EEEEEEEECSBCCTGGGTTSGGGG-G----GGGTTGGGGS
T ss_pred ---c------ccccchhHHHHHHHHHHHHHHHhcccC---ceEEEeeeCcCcCcchhhhccccC-H----HHHHHHHhcC
Confidence 1 0000 02344444444444432 257 999999999886653211110000 0 0000000001
Q ss_pred eecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcc
Q 045430 154 LFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVF 200 (309)
Q Consensus 154 ~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~ 200 (309)
| ..-+...+|+|+++++.+.. ....||++.|.+|..+
T Consensus 223 p----------lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl 261 (297)
T d1yxma1 223 P----------AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL 261 (297)
T ss_dssp T----------TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred C----------CCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChhh
Confidence 1 11244578899999988853 2356999999888643
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=96.48 E-value=0.0061 Score=51.46 Aligned_cols=162 Identities=12% Similarity=0.067 Sum_probs=86.0
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
+...++|+++|.|+.... +++..+++|+.|+.++.+++... ...-.++|++||...+-..
T Consensus 75 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-------- 146 (256)
T d1k2wa_ 75 DRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE-------- 146 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------
T ss_pred HHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc--------
Confidence 344578999999985322 34556899999999988764321 1123689999997544210
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
| ..+. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|-.| +..... .......+.+
T Consensus 147 ----~------~~~~Y~asKaal~~lt~~lA~el~~~g---IrVN~V~PG~i~T~----~~~~~~-----~~~~~~~~~~ 204 (256)
T d1k2wa_ 147 ----A------LVGVYCATKAAVISLTQSAGLNLIRHG---INVNAIAPGVVDGE----HWDGVD-----AKFADYENLP 204 (256)
T ss_dssp ----T------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCCT----THHHHH-----HHHHHHHTCC
T ss_pred ----c------cccchhhhhhHHHHHHHHHHHHhcccC---eEEEEEecCCCCch----hhhhhh-----hhhhhhccCC
Confidence 0 0000 02344444343333321 257 99999999876443 221110 0000000000
Q ss_pred eeecCCcccc---ccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 153 LLFPGSKDCW---EGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 153 ~~~~G~~~~~---~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
.. -....+ .-+.=+...+|+|+++++.+... ...||+..|.+|..+|
T Consensus 205 ~~--~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 205 RG--EKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp TT--HHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred hH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence 00 000000 00112345788999988877432 3469999998886553
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=96.46 E-value=0.0052 Score=51.98 Aligned_cols=158 Identities=6% Similarity=-0.019 Sum_probs=82.4
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....+|+++|.|++... ++++.+++|+.|+.++.+++. +. +-.++|++||.......
T Consensus 80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~G~Iv~isS~~~~~~~-------- 149 (260)
T d1x1ta1 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ--GFGRIINIASAHGLVAS-------- 149 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCGGGTSCC--------
T ss_pred HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc--CCceEeecccccceecc--------
Confidence 33468999999985322 344578999999888777653 33 23689999997554211
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
| ..+. -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+--...... .....+..
T Consensus 150 ----~------~~~~Y~asKaal~~lt~~lA~el~~~g---IrVN~I~PG~i~T~~~~~~~~~---------~~~~~~~~ 207 (260)
T d1x1ta1 150 ----A------NKSAYVAAKHGVVGFTKVTALETAGQG---ITANAICPGWVRTPLVEKQISA---------LAEKNGVD 207 (260)
T ss_dssp ----T------TCHHHHHHHHHHHHHHHHHHHHHTTTT---EEEEEEEECCBCC--------------------------
T ss_pred ----C------CcchhhhhhhhHHHhHHHHHHHhchhC---cEEEEEecCCCCChhhhhhhhh---------hhhhcCCC
Confidence 0 0000 02233333333333332 257 9999999998855422111100 00000000
Q ss_pred eeecCCc--cccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 153 LLFPGSK--DCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 153 ~~~~G~~--~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
..-.-.. ....-..-+...+|+|+++++.+.. ....||+.+|.+|-
T Consensus 208 ~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~ 257 (260)
T d1x1ta1 208 QETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp -------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcch
Confidence 0000000 0000112345688999999988853 23569999998773
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.46 E-value=0.0044 Score=52.39 Aligned_cols=154 Identities=13% Similarity=0.018 Sum_probs=87.0
Q ss_pred hccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC----CCCCceEEEEeCCccccCCccccC
Q 045430 6 KLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN----APNLRHVCLQTGGKHYVGPFESFG 72 (309)
Q Consensus 6 ~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~----~~~v~r~v~~Ss~~vYG~~~~~~~ 72 (309)
.++....+|.++|+|++... ++++.+++|+.|+.++.+++... ..+-.++|.+||...+-..
T Consensus 73 ~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~----- 147 (257)
T d2rhca1 73 VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV----- 147 (257)
T ss_dssp HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC-----
T ss_pred HHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc-----
Confidence 34455678999999985322 34557899999999999987542 1134578999887544211
Q ss_pred CCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHH----------H
Q 045430 73 KIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGT----------L 139 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~----------~ 139 (309)
| ..+. -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--| +...... -
T Consensus 148 -------~------~~~~Y~asKaal~~ltk~lA~el~~~g---IrVN~I~PG~i~T~----~~~~~~~~~~~~~~~~~~ 207 (257)
T d2rhca1 148 -------V------HAAPYSASKHGVVGFTKALGLELARTG---ITVNAVCPGFVETP----MAASVREHYSDIWEVSTE 207 (257)
T ss_dssp -------T------TCHHHHHHHHHHHHHHHHHHHHTTTSE---EEEEEEEECSBCSH----HHHHHHHHHHHHTTCCHH
T ss_pred -------c------cchhHHHHHHHHHHHHHHHHHHhhhhC---cEEEEEeeCCCCCH----HHHHHHhhhhhhcccChH
Confidence 0 0000 02233344444444432 245 99999999987432 1111000 0
Q ss_pred HHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 140 CVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 140 ~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
..+..+. ...|+ .-+...+|+|+++++.+.. ....||++.|.+|-
T Consensus 208 e~~~~~~--~~~Pl------------gR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ 254 (257)
T d2rhca1 208 EAFDRIT--ARVPI------------GRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 254 (257)
T ss_dssp HHHHHHH--TTSTT------------SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHH--hcCCC------------CCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence 0000110 11111 1245688899999888853 33569999998763
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.39 E-value=0.0075 Score=50.67 Aligned_cols=153 Identities=12% Similarity=-0.005 Sum_probs=82.9
Q ss_pred CCCCccEEEEeecccC------C-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCC
Q 045430 9 KLTDVTHIFYVTWASR------P-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
...++|+++|+|+... . ++...+++|+.++..+..++...-..=.++|++||.......
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~-------- 154 (256)
T d1ulua_ 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV-------- 154 (256)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC--------
T ss_pred hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC--------
Confidence 4457899999997421 1 223357999999999988876431112579999987554311
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
| .... ..+|-+.+.+.+..+.+ ..+ +.+..|.|+.|.-+........- .....+.+ ..|
T Consensus 155 ----~------~~~~Y~asKaal~~ltr~lA~ela~~g---IrVN~I~PG~i~t~~~~~~~~~~---~~~~~~~~--~~p 216 (256)
T d1ulua_ 155 ----P------KYNVMAIAKAALEASVRYLAYELGPKG---VRVNAISAGPVRTVAARSIPGFT---KMYDRVAQ--TAP 216 (256)
T ss_dssp ----T------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCC----------CH---HHHHHHHH--HST
T ss_pred ----C------CchHHHHHHHHHHHHHHHHHHHhcccC---CEEeeeccceeeeccccchhhhH---HHHHHHHh--cCC
Confidence 0 0000 02233333333333321 257 99999999988765432211110 11111111 123
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+. -+...+|+|+++++.+... ...||++.|.+|-.
T Consensus 217 l~------------R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 217 LR------------RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp TS------------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CC------------CCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence 21 1335788999988887532 35699999988754
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=96.38 E-value=0.012 Score=49.75 Aligned_cols=152 Identities=7% Similarity=-0.008 Sum_probs=84.0
Q ss_pred CccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 12 ~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.+|+++|+|+.... ++...+++|+.++.++.+++... ..+-.++|++||.......
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~------------- 150 (258)
T d1ae1a_ 84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL------------- 150 (258)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-------------
T ss_pred CcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc-------------
Confidence 38999999984322 34557899999998888775422 1145799999998554311
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH-HHHHHHHHHHhHhCCceeec
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV-GTLCVYAAICKHEGVPLLFP 156 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~-~~~~i~~~l~~~~g~~~~~~ 156 (309)
|..+. -.+|.+-+.+.+..+.+ ..+ +.+..|.|+.|.-+.-.+.+... ..-.....+.+ ..|+
T Consensus 151 -----~~~~~Y~~sK~al~~lt~~lA~el~~~g---IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~pl--- 217 (258)
T d1ae1a_ 151 -----PSVSLYSASKGAINQMTKSLACEWAKDN---IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV--KTPM--- 217 (258)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBC-------------CHHHHHHHHH--HSTT---
T ss_pred -----ccchhHHHHHHHHHHHHHHHHHhcCcCc---EEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHh--cCCC---
Confidence 00011 02344444444443332 257 99999999999765332221100 00011111111 1122
Q ss_pred CCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCC
Q 045430 157 GSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGD 198 (309)
Q Consensus 157 G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~ 198 (309)
.-+...+|+|.++++.+.. ....|+.+.|..|-
T Consensus 218 ---------gR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~ 252 (258)
T d1ae1a_ 218 ---------GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGF 252 (258)
T ss_dssp ---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ---------CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence 1255788999999888853 33569999998764
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=96.35 E-value=0.0023 Score=54.36 Aligned_cols=156 Identities=12% Similarity=0.020 Sum_probs=84.9
Q ss_pred CCCCccEEEEeecccC---C-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCC
Q 045430 9 KLTDVTHIFYVTWASR---P-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRP 76 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~ 76 (309)
...++|+++|.|++.. + ++++.+++|+.|+.++.+++... ..+=.++|++||...+-..
T Consensus 80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~--------- 150 (258)
T d1iy8a_ 80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--------- 150 (258)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---------
T ss_pred HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC---------
Confidence 3456899999998421 1 33456899999999998876322 0123589999997544210
Q ss_pred CCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhH---HHHHHHHHHHhHhC
Q 045430 77 HDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVV---GTLCVYAAICKHEG 150 (309)
Q Consensus 77 ~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~---~~~~i~~~l~~~~g 150 (309)
|..+. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|.-|--.+.+... ..-.....+ ...
T Consensus 151 ---------~~~~~Y~asKaal~~lt~~lA~el~~~g---IrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~ 216 (258)
T d1iy8a_ 151 ---------GNQSGYAAAKHGVVGLTRNSAVEYGRYG---IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEF--IQV 216 (258)
T ss_dssp ---------SSBHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHH--HTT
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHhCccC---ceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHH--Hhc
Confidence 00000 02233333333333221 257 99999999988543210000000 000000000 011
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCc
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDV 199 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~ 199 (309)
.|+ .-+...+|+|+++++.+.. ....||+..|.+|..
T Consensus 217 ~pl------------~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 217 NPS------------KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp CTT------------CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred CCC------------CCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 121 1234678899999888853 235699999998864
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.98 E-value=0.008 Score=50.88 Aligned_cols=150 Identities=8% Similarity=-0.009 Sum_probs=74.4
Q ss_pred CccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 12 DVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 12 ~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
.+|+++|+|+.... +++..+++|+.|+.++.+++... ..+-.++|++||....-.. |
T Consensus 86 ~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------~ 153 (259)
T d1xq1a_ 86 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA------------S 153 (259)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------
T ss_pred CcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc------------c
Confidence 48999999984221 34557899999998888775432 0034689999997543210 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
..+. ..+|.+.+.+.+..+.+ ..+ +.+..|-|+.|--|--.+...- ...+..-...|.
T Consensus 154 ------~~~~Y~asKaal~~lt~~lA~e~~~~g---IrVN~V~PG~i~T~~~~~~~~~--------~~~~~~~~~~pl-- 214 (259)
T d1xq1a_ 154 ------VGSIYSATKGALNQLARNLACEWASDG---IRANAVAPAVIATPLAEAVYDD--------EFKKVVISRKPL-- 214 (259)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEECCSCC--------------------------------
T ss_pred ------ccccccccccchhhhhHHHHHHhcccC---eEEEEeccCcccCHHhhhhchH--------HHHHHHHhCCCC--
Confidence 0011 12333433333333321 257 9999999998855422111110 000000001111
Q ss_pred CccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcc
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVF 200 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~ 200 (309)
.-+...+|+|+++++.+.. ....||...|..|-.+
T Consensus 215 --------~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s~ 251 (259)
T d1xq1a_ 215 --------GRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV 251 (259)
T ss_dssp -----------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred --------CCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEEC
Confidence 1133566789888887743 2356999999887543
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=95.98 E-value=0.032 Score=47.36 Aligned_cols=153 Identities=8% Similarity=-0.037 Sum_probs=84.8
Q ss_pred CCCCccEEEEeeccc----CC----C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 9 KLTDVTHIFYVTWAS----RP----T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~----~~----~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
...++|+++|.|+.. .+ + +...+++|+.++.+++.++......=.+.+.+|+.+.....
T Consensus 116 ~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------- 185 (297)
T d1d7oa_ 116 DFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII---------- 185 (297)
T ss_dssp HHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC----------
T ss_pred HhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhcccc----------
Confidence 345789999999842 11 2 34467999999999999886542112345666665433221
Q ss_pred CCCCCCCCCCCCcc-cchHHHHH----HHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 78 DTPFTEDLPRLNVT-NFYYTQED----ILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 78 ~~p~~E~~p~~p~p-~~~y~~e~----~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
. +..... .+|-+.+. +..++..+ .+ +.+..|.|+.|--+........ -.......+ ..|
T Consensus 186 ~-------~~~~~y~~aKaa~~~l~~~~a~e~~~~-~g---IrvN~I~PG~i~T~~~~~~~~~---~~~~~~~~~--~~P 249 (297)
T d1d7oa_ 186 P-------GYGGGMSSAKAALESDTRVLAFEAGRK-QN---IRVNTISAGPLGSRAAKAIGFI---DTMIEYSYN--NAP 249 (297)
T ss_dssp T-------TCTTTHHHHHHHHHHHHHHHHHHHHHH-HC---CEEEEEEECCCBCCCSSCCSHH---HHHHHHHHH--HSS
T ss_pred c-------ccccceecccccccccccccchhcccc-ce---EEecccccccccchhhhhccCC---HHHHHHHHh--CCC
Confidence 0 000000 11212222 23333332 47 9999999999977654322111 011111111 223
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~ 199 (309)
+ | -+...+|+|+++++.+.. ....||+..|..|-.
T Consensus 250 l---g---------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s 286 (297)
T d1d7oa_ 250 I---Q---------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286 (297)
T ss_dssp S---C---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred C---C---------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence 2 1 134578899998888853 235699999988743
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.0062 Score=51.13 Aligned_cols=162 Identities=10% Similarity=0.014 Sum_probs=89.0
Q ss_pred HhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCC
Q 045430 5 AKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGK 73 (309)
Q Consensus 5 ~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~ 73 (309)
.....+.++|.++|+|+.... +++..+++|+.++..+++++... ..+-.++|++||...--.
T Consensus 67 ~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~------- 139 (245)
T d2ag5a1 67 QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK------- 139 (245)
T ss_dssp HHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB-------
T ss_pred ccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccC-------
Confidence 334456689999999984322 33456899999999998876532 112468999988632100
Q ss_pred CCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchh-HHHHHHHHHHHhHhC
Q 045430 74 IRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNV-VGTLCVYAAICKHEG 150 (309)
Q Consensus 74 ~~~~~~p~~E~~p~~p~p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~-~~~~~i~~~l~~~~g 150 (309)
|......+ ..+|-+.+.+++..+.+ ..+ +.+..|.|+.|-.|........ ...-.....+ ...
T Consensus 140 ------~~~~~~~Y---~~sKaal~~l~r~lA~e~~~~g---IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~--~~~ 205 (245)
T d2ag5a1 140 ------GVVNRCVY---STTKAAVIGLTKSVAADFIQQG---IRCNCVCPGTVDTPSLQERIQARGNPEEARNDF--LKR 205 (245)
T ss_dssp ------CCTTBHHH---HHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHH--HHT
T ss_pred ------CccchhHH---HHHHHHHHHHHHHHHHHhhhhC---cEEEEEeeceeechhhHhhhhhhhhhHHHHHHH--Hhc
Confidence 00000000 02234444444444432 257 9999999998876532110000 0000000011 012
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
.|+ .-+...+|+|+++.+.+..+ ...|+++.|..|..
T Consensus 206 ~pl------------~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 206 QKT------------GRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS 244 (245)
T ss_dssp CTT------------SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CCC------------CCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence 222 12445788999998888632 35699999998753
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=95.90 E-value=0.02 Score=47.76 Aligned_cols=149 Identities=13% Similarity=0.016 Sum_probs=86.9
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
...+|+++|+|+.... ++++.+++|+.++.++..++......-+.++.+||.+..+.+ .
T Consensus 77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~----------~-- 144 (241)
T d2a4ka1 77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF----------G-- 144 (241)
T ss_dssp HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH----------H--
T ss_pred hCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc----------C--
Confidence 3568999999984322 335568999999999998875543233455555554322211 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecC
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPG 157 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G 157 (309)
.+. ..+|.+.|.+.+..+.+ ..+ +.+..|-|+.|=.+--.+.... .+..+.+ ..|+.
T Consensus 145 -------~~~Y~~sK~al~~lt~~lA~el~~~g---IrvN~I~PG~v~T~~~~~~~~~-----~~~~~~~--~~p~~--- 204 (241)
T d2a4ka1 145 -------LAHYAAGKLGVVGLARTLALELARKG---VRVNVLLPGLIQTPMTAGLPPW-----AWEQEVG--ASPLG--- 204 (241)
T ss_dssp -------HHHHHHCSSHHHHHHHHHHHHHTTTT---CEEEEEEECSBCCGGGTTSCHH-----HHHHHHH--TSTTC---
T ss_pred -------ccccchhhHHHHHHHHHHHHHHhHhC---CEEeeeccCcCCCHHHHhhhHh-----HHHHHHh--CCCCC---
Confidence 001 13456666665555442 246 9999999998843321121111 1112111 22321
Q ss_pred CccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCc
Q 045430 158 SKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDV 199 (309)
Q Consensus 158 ~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~ 199 (309)
-+...+|+|+++.+++.. ....|+++.|.+|..
T Consensus 205 ---------r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 205 ---------RAGRPEEVAQAALFLLSEESAYITGQALYVDGGRS 239 (241)
T ss_dssp ---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred ---------CCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence 234678899998888853 235699999998864
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=95.85 E-value=0.012 Score=49.59 Aligned_cols=159 Identities=11% Similarity=0.051 Sum_probs=83.5
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
+....+|+++|+|+.... ++++.+++|+.|+.++..++... ...-.+++..||...+...
T Consensus 83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~-------- 154 (260)
T d1h5qa_ 83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN-------- 154 (260)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccc--------
Confidence 455679999999985322 34556799999988887765322 1133556666665444221
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
...+. ..+..+. -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+........ ....+. ...|
T Consensus 155 --~~~~~-~~~~~~~Y~asKaal~~lt~~lA~el~~~g---IrvN~I~PG~i~T~~~~~~~~~-----~~~~~~--~~~p 221 (260)
T d1h5qa_ 155 --QSSLN-GSLTQVFYNSSKAACSNLVKGLAAEWASAG---IRVNALSPGYVNTDQTAHMDKK-----IRDHQA--SNIP 221 (260)
T ss_dssp --EEETT-EECSCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCCGGGGGSCHH-----HHHHHH--HTCT
T ss_pred --ccccc-cCccccchhhhhhhHHHHHHHHHHHhchhC---eEEeecCCCcccCcchhccCHH-----HHHHHH--hcCC
Confidence 00000 0010000 02233333333333321 257 9999999998854432211111 111111 1233
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDV 199 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~ 199 (309)
+.- +...+|+|+++++.+... ...||++.|.+|..
T Consensus 222 l~R------------~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 258 (260)
T d1h5qa_ 222 LNR------------FAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 258 (260)
T ss_dssp TSS------------CBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CCC------------CcCHHHHHHHHHHHhcchhCCCcCceEEECCCee
Confidence 321 233566888888877532 35699999988863
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.018 Score=48.38 Aligned_cols=153 Identities=8% Similarity=-0.015 Sum_probs=84.3
Q ss_pred cCCCCccEEEEeeccc-C-C--------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCC
Q 045430 8 SKLTDVTHIFYVTWAS-R-P--------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~-~-~--------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
+...++|+++|.|+.. . . ++++.+++|+.|+.++.+++... + + .++|.+||...+-..
T Consensus 75 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~-G~Ii~isS~~~~~~~------- 145 (250)
T d1ydea1 75 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-Q-GNVINISSLVGAIGQ------- 145 (250)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCHHHHHCC-------
T ss_pred HhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-C-CCCcccccccccccc-------
Confidence 3445789999999842 1 1 23456899999999888876532 1 2 589999997654311
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc---chhHHHHHHHHHHHhH
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM---MNVVGTLCVYAAICKH 148 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~---~~~~~~~~i~~~l~~~ 148 (309)
+ .... ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--|--... .+. ....+... .
T Consensus 146 ---~--------~~~~Y~asKaal~~lt~~lA~e~a~~g---IrVN~I~PG~i~T~~~~~~~~~~~~--~~~~~~~~--~ 207 (250)
T d1ydea1 146 ---A--------QAVPYVATKGAVTAMTKALALDESPYG---VRVNCISPGNIWTPLWEELAALMPD--PRASIREG--M 207 (250)
T ss_dssp ---T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECSBCCHHHHHHHTTSSS--HHHHHHHH--H
T ss_pred ---c--------CcchhHHHHhhHHHHHHHHHHHhcccC---eEEEEEeeCCCCChhHHHHhhcCCC--HHHHHHHH--H
Confidence 0 0000 02333333333333321 257 9999999998843310000 000 00011111 1
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcC-CCCCCcceeecCCCc
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD-PYARNEAFNCSNGDV 199 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~-~~a~g~~fNI~~g~~ 199 (309)
...|+ .-+...+|+|+++++.+.. ....||++.|.+|-.
T Consensus 208 ~~~pl------------~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~ 247 (250)
T d1ydea1 208 LAQPL------------GRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAE 247 (250)
T ss_dssp HTSTT------------SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred hcCCC------------CCCCCHHHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence 12232 1234578899988887742 235699999988854
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.58 E-value=0.088 Score=44.20 Aligned_cols=153 Identities=14% Similarity=-0.027 Sum_probs=84.1
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDT 79 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~ 79 (309)
...++|+++|.|+.... ++.+.+++|+.++.++++++...-..=.++++++|+.....+ .
T Consensus 93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~-----------~ 161 (272)
T d1g0oa_ 93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA-----------V 161 (272)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS-----------C
T ss_pred HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc-----------c
Confidence 34468999999984211 334467999999999888876432122577888765322110 0
Q ss_pred CCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccC--------C---CcchhHHHHHHHHHH
Q 045430 80 PFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSP--------Y---SMMNVVGTLCVYAAI 145 (309)
Q Consensus 80 p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~--------~---~~~~~~~~~~i~~~l 145 (309)
+..+. -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|-.+-- . ...... ......
T Consensus 162 ------~~~~~Y~asKaal~~ltk~lA~e~~~~g---IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 229 (272)
T d1g0oa_ 162 ------PKHAVYSGSKGAIETFARCMAIDMADKK---ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEE--VDEYAA- 229 (272)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHH--HHHHHH-
T ss_pred ------cchhhHHHHHHHHHHHHHHHHHHhchhC---eEEEEEccCCcCChHHHHHHHhhhhcccccchHH--HHHHHH-
Confidence 00000 02344444454444432 257 9999999998853310 0 000000 000000
Q ss_pred HhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 146 CKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 146 ~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
....|+ .-+...+|+|+++++.+... ...|++..|.+|.
T Consensus 230 --~~~~Pl------------gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 230 --VQWSPL------------RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp --HHSCTT------------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred --HccCCC------------CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 011121 12456888999999988643 2469999998885
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.56 E-value=0.018 Score=48.33 Aligned_cols=146 Identities=5% Similarity=-0.091 Sum_probs=80.2
Q ss_pred CccEEEEeecccC--C-------C---hHHHHHhHHHHHHHHHHHhCcC---CCC-CceEEEEeCCccccCCccccCCCC
Q 045430 12 DVTHIFYVTWASR--P-------T---EAENCEVNGAMLRNVLRSVIPN---APN-LRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 12 ~vd~V~H~A~~~~--~-------~---~~~~~~vNv~gt~nll~a~~~~---~~~-v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
.+|.+++.|+... . + ++..+++|+.|+.++.+++... .++ -.++|++||...+-.
T Consensus 92 ~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~--------- 162 (259)
T d1oaaa_ 92 QRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP--------- 162 (259)
T ss_dssp CEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC---------
T ss_pred ceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC---------
Confidence 5788999887421 1 2 3446899999998888877433 111 357999998754421
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhcCCCcceeEEeecCCceecccCCCcchhHHH----HHHHHHHHhHhC
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGT----LCVYAAICKHEG 150 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~----~~i~~~l~~~~g 150 (309)
.| ..+. -.+|.+.+.+.+..+.+..+ +.+..|.|+.|-.+- ...... -.....+.+.
T Consensus 163 ---~~------~~~~Y~asKaal~~lt~~la~e~~g---IrVn~v~PG~i~T~~----~~~~~~~~~~~~~~~~~~~~-- 224 (259)
T d1oaaa_ 163 ---YK------GWGLYCAGKAARDMLYQVLAAEEPS---VRVLSYAPGPLDNDM----QQLARETSKDPELRSKLQKL-- 224 (259)
T ss_dssp ---CT------TCHHHHHHHHHHHHHHHHHHHHCTT---EEEEEEECCSBSSHH----HHHHHHHCSCHHHHHHHHHH--
T ss_pred ---Cc------cchHHHHHHHHHHHHHHHHHhCCCC---CEEEEEEcCCCCCHH----HHHhhhcCCCHHHHHHHHhc--
Confidence 00 0011 02344445555555554467 999999998885541 110000 0000111100
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecC
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSN 196 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~ 196 (309)
.+ ..-+...+++|+++++.+... -..|+.++|-|
T Consensus 225 --~~----------~~r~~~p~evA~~i~~ll~~~s~~TG~~idv~d 259 (259)
T d1oaaa_ 225 --KS----------DGALVDCGTSAQKLLGLLQKDTFQSGAHVDFYD 259 (259)
T ss_dssp --HH----------TTCSBCHHHHHHHHHHHHHHCCSCTTEEEETTC
T ss_pred --CC----------CCCCCCHHHHHHHHHHHhhhccCCCCCeEEecC
Confidence 00 012345788999988877543 24588887754
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.49 E-value=0.055 Score=46.94 Aligned_cols=95 Identities=4% Similarity=-0.163 Sum_probs=56.1
Q ss_pred CCCccEEEEeeccc----CC-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCC
Q 045430 10 LTDVTHIFYVTWAS----RP-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHD 78 (309)
Q Consensus 10 ~~~vd~V~H~A~~~----~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~ 78 (309)
..++|+++|.|+.. .+ ++...+++|+.++.++++++...-..=.++|.+||......
T Consensus 111 ~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~------------ 178 (329)
T d1uh5a_ 111 YGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKV------------ 178 (329)
T ss_dssp HCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC------------
T ss_pred hCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhccc------------
Confidence 34689999998732 12 23446799999998888887654112257888887644421
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh---cCCCcceeEEeecCCce
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK---RKGPLSLTWSVHRPHII 124 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~---~~~~~~~~~~ilRP~~V 124 (309)
.|- +... -.+|-+.+.+.+..+.+ ..+ +.+..|.|+.|
T Consensus 179 ~p~-----y~~~y~asKaal~~ltr~lA~Ela~~~g---IRVNaI~PG~i 220 (329)
T d1uh5a_ 179 VPG-----YGGGMSSAKAALESDTRVLAYHLGRNYN---IRINTISAGPL 220 (329)
T ss_dssp CTT-----CTTTHHHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCC
T ss_pred ccc-----cchhhhhhhccccccchhhHHHHhcccC---cEEEEEecCcc
Confidence 110 0000 02344445444444432 147 99999999866
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=95.48 E-value=0.022 Score=47.98 Aligned_cols=98 Identities=12% Similarity=0.063 Sum_probs=58.8
Q ss_pred cCCCCccEEEEeeccc---CC-------ChHHHHHhHHHHHHHHHHHhCcC--CCCCceEEEEeCCccccCCccccCCCC
Q 045430 8 SKLTDVTHIFYVTWAS---RP-------TEAENCEVNGAMLRNVLRSVIPN--APNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~---~~-------~~~~~~~vNv~gt~nll~a~~~~--~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
+....+|+++|.|+.. .+ +++..+++|+.++.++..++... ..+-.++|++||...+-..
T Consensus 78 ~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~-------- 149 (260)
T d1zema1 78 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-------- 149 (260)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC--------
T ss_pred HHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC--------
Confidence 3445789999999842 11 33446799999999888876432 0123689999997654311
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceec
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFG 126 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyG 126 (309)
|..+. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--
T Consensus 150 ----------~~~~~Y~asKaal~~ltk~lA~el~~~g---IrVN~I~PG~v~T 190 (260)
T d1zema1 150 ----------PNMAAYGTSKGAIIALTETAALDLAPYN---IRVNAISPGYMGP 190 (260)
T ss_dssp ----------TTBHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECSBCS
T ss_pred ----------cchHHHHHHHHHHHHHHHHHHHHhhhhC---CEEEEeccCcccC
Confidence 00001 02344444443333322 257 9999999998754
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.32 E-value=0.035 Score=46.99 Aligned_cols=158 Identities=9% Similarity=0.004 Sum_probs=82.9
Q ss_pred CCCCccEEEEeeccc--CC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCC
Q 045430 9 KLTDVTHIFYVTWAS--RP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~--~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
....+|+++|+|+.. .. +++..+++|+.++.++.+++... + +-.+++++||...+...
T Consensus 81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~ii~~ss~~~~~~~------- 152 (274)
T d1xhla_ 81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSIVAGPQAH------- 152 (274)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGSSSCC-------
T ss_pred HcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-ccccccchhhhhccccC-------
Confidence 344689999999842 11 23446799999999888776432 2 23567777765333210
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc-chhHHHHHHHHHHHhHhC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM-MNVVGTLCVYAAICKHEG 150 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~~~~i~~~l~~~~g 150 (309)
| ..+. ..+|.+-+.+.+..+.+ ..+ +.+..|.|+.|--|-.... ......-.+...+ ....
T Consensus 153 -----~------~~~~Y~asKaal~~ltk~lA~ela~~g---IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~~~~ 217 (274)
T d1xhla_ 153 -----S------GYPYYACAKAALDQYTRCTAIDLIQHG---VRVNSVSPGAVATGFMGAMGLPETASDKLYSFI-GSRK 217 (274)
T ss_dssp -----T------TSHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHH-HHCT
T ss_pred -----C------CCceehhhhhHHHHHHHHHHHHHhHhC---CceeeeccCCCcCchhhhhcccchhhHHHHHHH-HHHH
Confidence 0 0000 02233333333333321 257 9999999998854411000 0000000011111 1111
Q ss_pred CceeecCCccccccceeccCHHHHHHHHHHHhcC---CCCCCcceeecCCCc
Q 045430 151 VPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD---PYARNEAFNCSNGDV 199 (309)
Q Consensus 151 ~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~---~~a~g~~fNI~~g~~ 199 (309)
..+|. | =+...+|+|+++++.+.. ....||++.|.+|..
T Consensus 218 ~~iPl-g---------R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 218 ECIPV-G---------HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp TTCTT-S---------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred cCCCC-C---------CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 11221 1 134578899999887752 235799999998864
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.27 E-value=0.013 Score=49.47 Aligned_cols=157 Identities=15% Similarity=0.125 Sum_probs=79.6
Q ss_pred ccCCCCccEEEEeecccCC-------------ChHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCcc-c-cCCccc
Q 045430 7 LSKLTDVTHIFYVTWASRP-------------TEAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKH-Y-VGPFES 70 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~v-Y-G~~~~~ 70 (309)
++...++|+++|+|+...+ +++..+++|+.++.++.+++... ..+-.++|.++|+.. + +.+
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~--- 156 (264)
T d1spxa_ 80 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP--- 156 (264)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT---
T ss_pred HHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCC---
Confidence 3344578999999984211 23456789999998887776532 001135666666422 2 110
Q ss_pred cCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCc-chhHH---HHHHHH
Q 045430 71 FGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM-MNVVG---TLCVYA 143 (309)
Q Consensus 71 ~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~---~~~i~~ 143 (309)
. .+. ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+-.... ...-. ......
T Consensus 157 -------~---------~~~Y~asKaal~~lt~~lA~el~~~g---IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 217 (264)
T d1spxa_ 157 -------D---------FPYYSIAKAAIDQYTRNTAIDLIQHG---IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMA 217 (264)
T ss_dssp -------T---------SHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBCCCC--------------HHHHH
T ss_pred -------C---------chhhhhhhhhHHHHHHHHHHHhcccC---eEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHH
Confidence 0 000 02333333333333321 257 9999999998854321110 00000 000011
Q ss_pred HHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC---CCCCcceeecCCCc
Q 045430 144 AICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP---YARNEAFNCSNGDV 199 (309)
Q Consensus 144 ~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~~g~~ 199 (309)
.+. ...|+ .-+...+|+|+++++.+..+ ...||++.|..|..
T Consensus 218 ~~~--~~~Pl------------~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 218 TMK--ECVPA------------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp HHH--HHCTT------------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred HHH--hcCCC------------CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence 111 11121 11345788999998877533 35799999988764
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.04 E-value=0.024 Score=48.03 Aligned_cols=157 Identities=11% Similarity=0.093 Sum_probs=80.5
Q ss_pred cCCCCccEEEEeecccCC-------------ChHHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCC-ccccCCccccC
Q 045430 8 SKLTDVTHIFYVTWASRP-------------TEAENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGG-KHYVGPFESFG 72 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~-~vYG~~~~~~~ 72 (309)
+...++|+++|+|+...+ +++..+++|+.++.++.+++...- .+=.++|.++|+ +...
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~------- 153 (272)
T d1xkqa_ 81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ------- 153 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS-------
T ss_pred HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc-------
Confidence 344568999999985321 134467899999988887764320 011355555553 2221
Q ss_pred CCCCCCCCCCCCCCCCCcccchHHHHH-----HHHHHHHh--cCCCcceeEEeecCCceecccCCCc-chhHHHHHHHHH
Q 045430 73 KIRPHDTPFTEDLPRLNVTNFYYTQED-----ILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSM-MNVVGTLCVYAA 144 (309)
Q Consensus 73 ~~~~~~~p~~E~~p~~p~p~~~y~~e~-----~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~-~~~~~~~~i~~~ 144 (309)
.. |. ...|...| +.+..+.+ ..+ +.+..|-|+.|--+--... ......-.....
T Consensus 154 -----~~---------~~-~~~Y~asKaal~~ltk~lA~el~~~g---IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~ 215 (272)
T d1xkqa_ 154 -----AQ---------PD-FLYYAIAKAALDQYTRSTAIDLAKFG---IRVNSVSPGMVETGFTNAMGMPDQASQKFYNF 215 (272)
T ss_dssp -----CC---------CS-SHHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHH
T ss_pred -----CC---------CC-cchhhhHHHHHHHHHHHHHHHhcccC---eEEEEEeeCCCcchhhhccCCchHHHHHHHHH
Confidence 00 11 12344333 32222221 257 9999999998854311000 000000000111
Q ss_pred HHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC---CCCCcceeecCCCcc
Q 045430 145 ICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP---YARNEAFNCSNGDVF 200 (309)
Q Consensus 145 l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~---~a~g~~fNI~~g~~~ 200 (309)
+ ......+|. .-+...+|+|+++++.+..+ ...||++.|.+|..+
T Consensus 216 ~-~~~~~~~Pl----------gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 216 M-ASHKECIPI----------GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp H-HHCTTTCTT----------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred H-HHHhcCCCC----------CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 1 111111221 11345788999988887532 356999999988654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=94.75 E-value=0.022 Score=47.44 Aligned_cols=129 Identities=9% Similarity=-0.006 Sum_probs=74.6
Q ss_pred ccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCC
Q 045430 7 LSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKI 74 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~ 74 (309)
++....+|.++|.|+.... +++..+++|+.|+.++.+++... . +=.++|++||...+...
T Consensus 80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~~------- 151 (240)
T d2bd0a1 80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKAF------- 151 (240)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC-------
T ss_pred HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEEechhhcCCC-------
Confidence 3455678999999984322 33456899999998887776432 1 23689999998655311
Q ss_pred CCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCC
Q 045430 75 RPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGV 151 (309)
Q Consensus 75 ~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~ 151 (309)
| .... ..+|.+.+-+.+..+.+ ..+ +.+..|.|+.|--+ +..
T Consensus 152 -----~------~~~~Y~asK~al~~lt~~la~el~~~g---Irvn~i~PG~v~T~----~~~----------------- 196 (240)
T d2bd0a1 152 -----R------HSSIYCMSKFGQRGLVETMRLYARKCN---VRITDVQPGAVYTP----MWG----------------- 196 (240)
T ss_dssp -----T------TCHHHHHHHHHHHHHHHHHHHHHTTTT---EEEEEEEECCBCST----TTC-----------------
T ss_pred -----C------CChHHHHHHHHHHHHHHHHHHHhCcCC---eEEEEeeeCcccCc----hhh-----------------
Confidence 0 0000 02233333333333221 257 99999999988433 210
Q ss_pred ceeecCCccccccceeccCHHHHHHHHHHHhcCC
Q 045430 152 PLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP 185 (309)
Q Consensus 152 ~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~ 185 (309)
.+ +.. ...-+...+|+|+++++++..+
T Consensus 197 ~~--~~~-----~~~~~~~PedvA~~v~~l~s~~ 223 (240)
T d2bd0a1 197 KV--DDE-----MQALMMMPEDIAAPVVQAYLQP 223 (240)
T ss_dssp CC--CST-----TGGGSBCHHHHHHHHHHHHTSC
T ss_pred hc--CHh-----hHhcCCCHHHHHHHHHHHHcCC
Confidence 00 000 0112345789999999988765
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.73 E-value=0.019 Score=48.01 Aligned_cols=56 Identities=14% Similarity=0.068 Sum_probs=39.9
Q ss_pred ccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccc
Q 045430 7 LSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHY 64 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vY 64 (309)
.+....+|+++|+|+.... .+++.+++|+.|..++.+++. +. +-.++|++||...+
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~~G~Iv~isS~~~~ 147 (244)
T d1yb1a_ 79 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN--NHGHIVTVASAAGH 147 (244)
T ss_dssp HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEECCCC-C
T ss_pred HHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc--CCceEEEeecchhc
Confidence 3456678999999985322 335578999999988877653 33 34689999998554
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=94.65 E-value=0.049 Score=45.55 Aligned_cols=154 Identities=9% Similarity=-0.025 Sum_probs=80.8
Q ss_pred CCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCc-cccCCccccCCCCCCC
Q 045430 9 KLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGK-HYVGPFESFGKIRPHD 78 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~-vYG~~~~~~~~~~~~~ 78 (309)
...++|+++|.|+.... .++..+++|+.+..++++++...-..=.+++.++|.. .++.
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~------------ 148 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG------------ 148 (259)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS------------
T ss_pred HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC------------
Confidence 44568999999985322 3345679999988777777644311113566665542 2210
Q ss_pred CCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceeccc--------C-CCcchhHHHHHHHHHHH
Q 045430 79 TPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFS--------P-YSMMNVVGTLCVYAAIC 146 (309)
Q Consensus 79 ~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~--------~-~~~~~~~~~~~i~~~l~ 146 (309)
. |..+. ..+|-+-+.+.+..+.+ ..+ +.+..|.|+.|--+- . ........ -.+...+.
T Consensus 149 ~------~~~~~Y~asK~al~~l~r~lA~e~~~~g---IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 218 (259)
T d1ja9a_ 149 I------PNHALYAGSKAAVEGFCRAFAVDCGAKG---VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQ-EKIDEGLA 218 (259)
T ss_dssp C------CSCHHHHHHHHHHHHHHHHHHHHHGGGT---CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCH-HHHHHHHH
T ss_pred C------CCchhHHHHHHHHHHHHHHHHHHHhhcC---eEEeccCcCCccChhhhhhhhhhhhhhcccCCH-HHHHHHHH
Confidence 0 00000 02233334444444432 256 999999999884321 0 00000000 00000110
Q ss_pred hHhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCC
Q 045430 147 KHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGD 198 (309)
Q Consensus 147 ~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~ 198 (309)
...|+ .-+...+|+++++++.+... ...|+..+|.+|.
T Consensus 219 --~~~pl------------~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 219 --NMNPL------------KRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp --HTSTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred --hCCCC------------CCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 11221 23456888999999888643 2469999998774
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.27 E-value=0.028 Score=48.47 Aligned_cols=143 Identities=10% Similarity=0.012 Sum_probs=82.5
Q ss_pred HHhccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccc-cCCccc
Q 045430 4 QAKLSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHY-VGPFES 70 (309)
Q Consensus 4 ~~~~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vY-G~~~~~ 70 (309)
+..++...++|+++|.|++..+ +++..+++|+.|+.++..++... + +=.|+|++||...+ |.+
T Consensus 82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IV~isS~~~~~~~~--- 157 (302)
T d1gz6a_ 82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGNF--- 157 (302)
T ss_dssp HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT---
T ss_pred HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-CCcEEEEeCChhhcCCCC---
Confidence 3444556679999999985322 34557899999999988875432 1 23599999997654 211
Q ss_pred cCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHh
Q 045430 71 FGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICK 147 (309)
Q Consensus 71 ~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~ 147 (309)
. .+. -.+|.+.+.+.+..+.+ ..+ +.+..|-|+.+ .+. +...
T Consensus 158 -------~---------~~~Y~asKaal~~lt~~la~E~~~~g---IrVN~I~PG~~----~t~-~~~~----------- 202 (302)
T d1gz6a_ 158 -------G---------QANYSAAKLGLLGLANTLVIEGRKNN---IHCNTIAPNAG----SRM-TETV----------- 202 (302)
T ss_dssp -------T---------CHHHHHHHHHHHHHHHHHHHHTGGGT---EEEEEEEEECC----STT-TGGG-----------
T ss_pred -------C---------cHHHHHHHHHHHHHHHHHHHHHhccC---CceeeeCCCCC----Ccc-hhhc-----------
Confidence 0 000 02233333333333322 257 99999999765 211 1100
Q ss_pred HhCCceeecCCccccccceeccCHHHHHHHHHHHhcCC-CCCCcceeecCCC
Q 045430 148 HEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP-YARNEAFNCSNGD 198 (309)
Q Consensus 148 ~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~-~a~g~~fNI~~g~ 198 (309)
...+ .......+|+|+++++.+... ...|+++.|..|-
T Consensus 203 -~~~~------------~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~ 241 (302)
T d1gz6a_ 203 -MPED------------LVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGW 241 (302)
T ss_dssp -SCHH------------HHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTE
T ss_pred -CcHh------------hHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCc
Confidence 0000 111223567888888877432 3469999998774
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=94.17 E-value=0.32 Score=39.89 Aligned_cols=157 Identities=8% Similarity=-0.068 Sum_probs=88.3
Q ss_pred hccCCCCccEEEEeecccCC-----------C---hHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCcccc
Q 045430 6 KLSKLTDVTHIFYVTWASRP-----------T---EAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESF 71 (309)
Q Consensus 6 ~~~~~~~vd~V~H~A~~~~~-----------~---~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~ 71 (309)
........|.++|.|+.... . ......+|+.+...+..++......=+.+|++||....-.
T Consensus 77 ~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~----- 151 (258)
T d1qsga_ 77 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----- 151 (258)
T ss_dssp HHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----
T ss_pred hhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC-----
Confidence 34455678999999874311 1 1224578888888888887654212245888887642211
Q ss_pred CCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhH
Q 045430 72 GKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH 148 (309)
Q Consensus 72 ~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~ 148 (309)
.| .... ..+|.+.+.+.+..+.+ ..+ +.+..|+|+.|.-+........- .....+.+
T Consensus 152 -------~~------~~~~Y~~sKaal~~ltr~lA~el~~~g---IrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~- 211 (258)
T d1qsga_ 152 -------IP------NYNVMGLAKASLEANVRYMANAMGPEG---VRVNAISAGPIRTLAASGIKDFR---KMLAHCEA- 211 (258)
T ss_dssp -------CT------TTTHHHHHHHHHHHHHHHHHHHHTTTT---EEEEEEEECCCCCTTGGGSTTHH---HHHHHHHH-
T ss_pred -------CC------CcHHHHHHHHHHHHHHHHHHHHhCccC---ceeecccccccccccccccchhh---hHHHHHHh-
Confidence 00 0001 13345555555544432 256 99999999999765332111110 01111111
Q ss_pred hCCceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcc
Q 045430 149 EGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVF 200 (309)
Q Consensus 149 ~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~ 200 (309)
..|+ | -+...+|+|+++++.+.. ....|+++.|..|-.+
T Consensus 212 -~~pl---~---------R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i 252 (258)
T d1qsga_ 212 -VTPI---R---------RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 252 (258)
T ss_dssp -HSTT---S---------SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred -CCCC---C---------CCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHH
Confidence 1222 1 134578899999888853 2356999999888543
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.14 E-value=0.049 Score=46.35 Aligned_cols=92 Identities=13% Similarity=-0.004 Sum_probs=55.5
Q ss_pred CCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHh----CcCCCCCceEEEEeCCccccCCccccCCCCCC
Q 045430 11 TDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSV----IPNAPNLRHVCLQTGGKHYVGPFESFGKIRPH 77 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~----~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~ 77 (309)
..+|++++.|+.... +++..+++|+.|+.++.+++ ++. +-.++|++||....-.
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~--~~G~Iv~isS~~g~~~----------- 148 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR--GSGRVLVTGSVGGLMG----------- 148 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEEGGGTSC-----------
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc--CCCceEEEechhhcCC-----------
Confidence 469999999984322 33446799999988887775 333 3368999999754421
Q ss_pred CCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCcee
Q 045430 78 DTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIF 125 (309)
Q Consensus 78 ~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~Vy 125 (309)
.| .... -.+|.+.+.+.+..+.+ ..| +.++.|.|+.|-
T Consensus 149 -~~------~~~~Y~asKaal~~l~~~la~El~~~g---IrVn~V~PG~v~ 189 (285)
T d1jtva_ 149 -LP------FNDVYCASKFALEGLCESLAVLLLPFG---VHLSLIECGPVH 189 (285)
T ss_dssp -CT------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBC
T ss_pred -CC------CchHHHHHHHHHHHHHHHHHHHhhccC---cEEEEEecCCCC
Confidence 10 0000 02333333333332221 257 999999999874
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.07 E-value=0.14 Score=42.18 Aligned_cols=128 Identities=15% Similarity=0.056 Sum_probs=68.9
Q ss_pred HHHHHhHHHHHHHHHHHhCcC--------CCCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCc-ccchHHHH
Q 045430 28 AENCEVNGAMLRNVLRSVIPN--------APNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNV-TNFYYTQE 98 (309)
Q Consensus 28 ~~~~~vNv~gt~nll~a~~~~--------~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e 98 (309)
+..+++|+.++.++..++... ..+-.++|++||...+-.. + ..+. -.+|.+.+
T Consensus 110 ~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~----------~--------~~~~Y~asKaal~ 171 (248)
T d2o23a1 110 QRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ----------V--------GQAAYSASKGGIV 171 (248)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC----------T--------TCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC----------C--------CchHHHHHHHHHH
Confidence 346799999999988886321 0122479999998655311 0 0011 13355555
Q ss_pred HHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHH
Q 045430 99 DILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAE 176 (309)
Q Consensus 99 ~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~ 176 (309)
.+.+..+.+ ..+ +.+..|.|+.|.-+......... ...+ ....| ..|. +...+|+|+
T Consensus 172 ~lt~~la~e~~~~g---IrvN~I~PG~i~T~~~~~~~~~~-----~~~~--~~~~p--l~~R---------~g~peevA~ 230 (248)
T d2o23a1 172 GMTLPIARDLAPIG---IRVMTIAPGLFGTPLLTSLPEKV-----CNFL--ASQVP--FPSR---------LGDPAEYAH 230 (248)
T ss_dssp HHHHHHHHHHGGGT---EEEEEEEECCBCCC---------------CHH--HHTCS--SSCS---------CBCHHHHHH
T ss_pred HHHHHHHHHhcccC---cceeeeccCceecchhhcCCHHH-----HHHH--HhcCC--CCCC---------CcCHHHHHH
Confidence 554444432 256 99999999988654321111000 0001 01222 2221 346788999
Q ss_pred HHHHHhcCCCCCCcceee
Q 045430 177 QHIWAAVDPYARNEAFNC 194 (309)
Q Consensus 177 a~i~aa~~~~a~g~~fNI 194 (309)
++++.+..+-..||+-+|
T Consensus 231 ~v~fL~s~~~itGq~I~v 248 (248)
T d2o23a1 231 LVQAIIENPFLNGEVIRL 248 (248)
T ss_dssp HHHHHHHCTTCCSCEEEE
T ss_pred HHHHHHhCCCCCceEeEC
Confidence 988888655556776654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=93.51 E-value=0.094 Score=44.26 Aligned_cols=95 Identities=6% Similarity=-0.082 Sum_probs=55.2
Q ss_pred cCCCCccEEEEeecccCC--------------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccccCCcc
Q 045430 8 SKLTDVTHIFYVTWASRP--------------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHYVGPFE 69 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~--------------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vYG~~~~ 69 (309)
+....+|+++|.|++... ++++.+++|+.|+.++..++. +. + .++|++||...+-.
T Consensus 75 ~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~-g~iI~i~S~~~~~~--- 148 (276)
T d1bdba_ 75 ARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--R-GNVIFTISNAGFYP--- 148 (276)
T ss_dssp HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEECCGGGTST---
T ss_pred HHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--C-CCceeeeechhccC---
Confidence 344578999999984211 145568999999888876653 33 2 47888887643311
Q ss_pred ccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHhc-CCCcceeEEeecCCceec
Q 045430 70 SFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEKR-KGPLSLTWSVHRPHIIFG 126 (309)
Q Consensus 70 ~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~~-~~~~~~~~~ilRP~~VyG 126 (309)
.| ..+. -.+|-+.+.+.+..+.+- .. +.+..|.|+.|--
T Consensus 149 ---------~~------~~~~Y~asKaal~~ltr~lA~ela~~---IrVN~I~PG~i~T 189 (276)
T d1bdba_ 149 ---------NG------GGPLYTAAKHAIVGLVRELAFELAPY---VRVNGVGSGGINS 189 (276)
T ss_dssp ---------TS------SCHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCCCS
T ss_pred ---------CC------CCchHHHHHHHHHHHHHHHHHHhhcc---eEEcccCCCCEec
Confidence 00 0010 022333344444444321 24 8999999998854
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.30 E-value=0.12 Score=43.05 Aligned_cols=58 Identities=16% Similarity=0.004 Sum_probs=39.4
Q ss_pred ccCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhC----cCCCCCceEEEEeCCccc
Q 045430 7 LSKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVI----PNAPNLRHVCLQTGGKHY 64 (309)
Q Consensus 7 ~~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~----~~~~~v~r~v~~Ss~~vY 64 (309)
++...++|+++|+|+.... +++..+++|+.+..++..++. +....=.++|++||.+.+
T Consensus 84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~ 154 (257)
T d1xg5a_ 84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH 154 (257)
T ss_dssp HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT
T ss_pred HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhc
Confidence 3345568999999984211 334568999999888766653 332223689999998665
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=92.44 E-value=1 Score=37.07 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=24.9
Q ss_pred cCHHHHHHHHHHHhcCC--CCCCcceeecCCCccc
Q 045430 169 SDADLIAEQHIWAAVDP--YARNEAFNCSNGDVFK 201 (309)
Q Consensus 169 ~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~s 201 (309)
...+|+|+++++.+... ...||++.|.+|-.+|
T Consensus 248 ~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 248 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 35788999998888532 3569999999886543
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.11 E-value=0.087 Score=43.27 Aligned_cols=136 Identities=10% Similarity=-0.075 Sum_probs=75.2
Q ss_pred CCccEEEEeecc-c--CC-------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCccccCCCCCCCCC
Q 045430 11 TDVTHIFYVTWA-S--RP-------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTP 80 (309)
Q Consensus 11 ~~vd~V~H~A~~-~--~~-------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p 80 (309)
..+|.++|+|+. . .. +++..+++|+.++.++..++..+-.+=.++|++||....... |
T Consensus 70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~------------~ 137 (236)
T d1dhra_ 70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------------P 137 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------T
T ss_pred CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc------------c
Confidence 469999999973 2 11 223357999999988887765431112689999997554211 0
Q ss_pred CCCCCCCCCc-ccchHHHHHHHHHHHHhc----CCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceee
Q 045430 81 FTEDLPRLNV-TNFYYTQEDILFEEVEKR----KGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLF 155 (309)
Q Consensus 81 ~~E~~p~~p~-p~~~y~~e~~~~~~~~~~----~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~ 155 (309)
.... -.+|.+.+.+.+..+.+- .+ +.+..|.|+.|.-| +. +... +
T Consensus 138 ------~~~~Y~asKaal~~lt~~la~El~~~~~g---I~vn~v~PG~v~T~----~~-------------~~~~-~--- 187 (236)
T d1dhra_ 138 ------GMIGYGMAKGAVHQLCQSLAGKNSGMPSG---AAAIAVLPVTLDTP----MN-------------RKSM-P--- 187 (236)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHTSTTSSCCTT---CEEEEEEESCEECH----HH-------------HHHS-T---
T ss_pred ------CCcccHHHHHHHHHHHHHHHHHhccCCCc---EEEEEEEeccCcCC----cc-------------hhhC-c---
Confidence 0000 023344444444444321 35 88999999877432 11 1110 1
Q ss_pred cCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceee
Q 045430 156 PGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNC 194 (309)
Q Consensus 156 ~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI 194 (309)
..+- ..++..+++|+.+..++... ...|+...|
T Consensus 188 ~~~~------~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 188 EADF------SSWTPLEFLVETFHDWITGNKRPNSGSLIQV 222 (236)
T ss_dssp TSCG------GGSEEHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred cchh------hcCCCHHHHHHHHHHHhCCCccCCCCCeEEE
Confidence 0011 12345788999888777543 245776655
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=92.05 E-value=0.1 Score=42.76 Aligned_cols=54 Identities=9% Similarity=-0.006 Sum_probs=36.8
Q ss_pred CCCccEEEEeecc-c--CC---C----hHHHHHhHHHHHHHHHHHhCcC-CCCCceEEEEeCCccc
Q 045430 10 LTDVTHIFYVTWA-S--RP---T----EAENCEVNGAMLRNVLRSVIPN-APNLRHVCLQTGGKHY 64 (309)
Q Consensus 10 ~~~vd~V~H~A~~-~--~~---~----~~~~~~vNv~gt~nll~a~~~~-~~~v~r~v~~Ss~~vY 64 (309)
...+|+++|+|+. . .+ + ++..+++|+.++.++..++..+ .++ .++|++||...+
T Consensus 69 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~~~~ 133 (235)
T d1ooea_ 69 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAAAAM 133 (235)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGGGG
T ss_pred CCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccHHhc
Confidence 4569999999983 1 11 2 2335799999988887776543 112 579999997544
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=91.90 E-value=0.47 Score=39.76 Aligned_cols=156 Identities=10% Similarity=0.015 Sum_probs=81.7
Q ss_pred cCCCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcC---CCCCceEEEEeCCccccCCccccCCCC
Q 045430 8 SKLTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPN---APNLRHVCLQTGGKHYVGPFESFGKIR 75 (309)
Q Consensus 8 ~~~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~---~~~v~r~v~~Ss~~vYG~~~~~~~~~~ 75 (309)
....++|+++|+|+.... ++.+.+.+|+.+...+..++... ...-..++.+||.......
T Consensus 99 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~-------- 170 (294)
T d1w6ua_ 99 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-------- 170 (294)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC--------
T ss_pred hhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc--------
Confidence 345678999999984322 23446788888877775553211 1134556666665333211
Q ss_pred CCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCc
Q 045430 76 PHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVP 152 (309)
Q Consensus 76 ~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~ 152 (309)
+ .... ..+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+.......... .....+. ...|
T Consensus 171 --~--------~~~~YsasKaal~~ltk~lA~ela~~g---IrVN~I~PG~i~T~~~~~~~~~~~--~~~~~~~--~~~p 233 (294)
T d1w6ua_ 171 --G--------FVVPSASAKAGVEAMSKSLAAEWGKYG---MRFNVIQPGPIKTKGAFSRLDPTG--TFEKEMI--GRIP 233 (294)
T ss_dssp --T--------TCHHHHHHHHHHHHHHHHHHHHHGGGT---EEEEEEEECCBCC------CCTTS--HHHHHHH--TTCT
T ss_pred --c--------ccchHHHHHHHHHHHHHHHHHHHhHhC---eEEEEEccCccccchhhhccCCcH--HHHHHHh--hcCC
Confidence 0 0000 02344444444443322 257 999999999996653221110000 0011111 1122
Q ss_pred eeecCCccccccceeccCHHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 153 LLFPGSKDCWEGYSVASDADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 153 ~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
+ | -+...+|+|+++.+.+... ...|++..|.+|..+
T Consensus 234 l---~---------R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l 271 (294)
T d1w6ua_ 234 C---G---------RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEV 271 (294)
T ss_dssp T---S---------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred C---C---------CCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChhh
Confidence 2 1 2335788999999887542 356999999988754
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=89.66 E-value=0.94 Score=36.20 Aligned_cols=132 Identities=13% Similarity=0.006 Sum_probs=74.3
Q ss_pred HHHHHhHHHHHHHHHHHhCcC----C----CCCceEEEEeCCccccCCccccCCCCCCCCCCCCCCCCCCc-ccchHHHH
Q 045430 28 AENCEVNGAMLRNVLRSVIPN----A----PNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRLNV-TNFYYTQE 98 (309)
Q Consensus 28 ~~~~~vNv~gt~nll~a~~~~----~----~~v~r~v~~Ss~~vYG~~~~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e 98 (309)
++.+++|+.+..+++.++... . .+-.++|++||...+-.. . .... ..+|.+.+
T Consensus 94 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~----------~--------~~~~Y~asKaal~ 155 (241)
T d1uaya_ 94 RRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ----------I--------GQAAYAASKGGVV 155 (241)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC----------T--------TCHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC----------C--------CchhhHHHHHHHH
Confidence 446789988888777654211 1 123589999998655211 0 0001 13345555
Q ss_pred HHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccCHHHHHH
Q 045430 99 DILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAE 176 (309)
Q Consensus 99 ~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~ 176 (309)
.+.+..+.+ ..+ +.+..|-|+.|--+......... ...+. ... +..|. +...+|+|+
T Consensus 156 ~lt~~lA~ela~~g---IrVN~V~PG~i~T~~~~~~~~~~-----~~~~~--~~~--~~~~R---------~g~pedvA~ 214 (241)
T d1uaya_ 156 ALTLPAARELAGWG---IRVVTVAPGLFDTPLLQGLPEKA-----KASLA--AQV--PFPPR---------LGRPEEYAA 214 (241)
T ss_dssp HHHHHHHHHHGGGT---EEEEEEEECSCSSHHHHTSCHHH-----HHHHH--TTC--CSSCS---------CCCHHHHHH
T ss_pred HHHHHHHHHHhhcC---CceeeecCCcccccccchhhhhH-----HHHHH--hcC--CCCCC---------CcCHHHHHH
Confidence 444444432 257 99999999988654322211110 01111 122 22222 235788999
Q ss_pred HHHHHhcCCCCCCcceeecCCC
Q 045430 177 QHIWAAVDPYARNEAFNCSNGD 198 (309)
Q Consensus 177 a~i~aa~~~~a~g~~fNI~~g~ 198 (309)
++++.+......||+..|.+|-
T Consensus 215 ~v~fL~s~~~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 215 LVLHILENPMLNGEVVRLDGAL 236 (241)
T ss_dssp HHHHHHHCTTCCSCEEEESTTC
T ss_pred HHHHHHhCCCCCCCEEEECCcc
Confidence 9888887655679999998774
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=89.21 E-value=0.49 Score=38.73 Aligned_cols=35 Identities=11% Similarity=0.085 Sum_probs=26.3
Q ss_pred CccEEEEeecccC---C----C---hHHHHHhHHHHHHHHHHHhC
Q 045430 12 DVTHIFYVTWASR---P----T---EAENCEVNGAMLRNVLRSVI 46 (309)
Q Consensus 12 ~vd~V~H~A~~~~---~----~---~~~~~~vNv~gt~nll~a~~ 46 (309)
++|+++|+|++.. + + +++.+++|+.|+.++.+++.
T Consensus 81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 125 (250)
T d1yo6a1 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL 125 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHH
Confidence 5899999998421 1 2 34478999999999888764
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=88.43 E-value=3 Score=33.66 Aligned_cols=164 Identities=10% Similarity=0.018 Sum_probs=81.6
Q ss_pred HHHhccCCCCccEEEEeecccCC-----------ChHH---HHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccccCCc
Q 045430 3 TQAKLSKLTDVTHIFYVTWASRP-----------TEAE---NCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPF 68 (309)
Q Consensus 3 ~~~~~~~~~~vd~V~H~A~~~~~-----------~~~~---~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vYG~~~ 68 (309)
+++.+.....+|.++|+|+.... ++.+ .+.+|+........+..... +-..++..+|......
T Consensus 77 v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~~~~~~-- 153 (268)
T d2h7ma1 77 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIM-NPGGSIVGMDFDPSRA-- 153 (268)
T ss_dssp HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEEECCCSSC--
T ss_pred hhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhc-cccccccccccccccc--
Confidence 45556677789999999984211 1122 34666767766666665442 1233444444332221
Q ss_pred cccCCCCCCCCCCCCCCCCCCc-ccchHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCC----Ccch--hHHHH
Q 045430 69 ESFGKIRPHDTPFTEDLPRLNV-TNFYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPY----SMMN--VVGTL 139 (309)
Q Consensus 69 ~~~~~~~~~~~p~~E~~p~~p~-p~~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~----~~~~--~~~~~ 139 (309)
.| .... -.+|.+.+.+.+..+.+ ..+ +.+..|.|+.|--+.-. .... .....
T Consensus 154 ----------~p------~~~~y~~sK~a~~~ltr~lA~e~~~~g---IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~ 214 (268)
T d2h7ma1 154 ----------MP------AYNWMTVAKSALESVNRFVAREAGKYG---VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQI 214 (268)
T ss_dssp ----------CT------TTHHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCCCCHHHHHHHTTTTCHHHHHHH
T ss_pred ----------Cc------ccchhhccccchhhccccchhhhhccC---CcceEEecCCCCChhhhhhccchhhhhhccch
Confidence 11 0000 02234444444443332 256 99999999988543110 0000 00000
Q ss_pred HHHHHHHhHhCCceeecCCccccccceeccCHHHHHHHHHHHhcC--CCCCCcceeecCCCcc
Q 045430 140 CVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIWAAVD--PYARNEAFNCSNGDVF 200 (309)
Q Consensus 140 ~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~vd~la~a~i~aa~~--~~a~g~~fNI~~g~~~ 200 (309)
..+..... ...|+. +-+...+|+|+++++.+.. ....|++..|.+|...
T Consensus 215 ~~~~~~~~-~~~pl~-----------rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~ 265 (268)
T d2h7ma1 215 QLLEEGWD-QRAPIG-----------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265 (268)
T ss_dssp HHHHHHHH-HHCTTC-----------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred HHHHHHHH-hcCCCC-----------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence 01110000 111211 2344577899998888853 2346999999988644
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=87.97 E-value=1.8 Score=35.35 Aligned_cols=88 Identities=7% Similarity=-0.047 Sum_probs=48.6
Q ss_pred chHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccC
Q 045430 93 FYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASD 170 (309)
Q Consensus 93 ~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~ 170 (309)
+|.+.+.+.+..+.+ ..+ +.+..+.|+.|.-+........-. ...... ...|+ .-+..
T Consensus 160 sK~al~~ltr~lA~e~~~~G---IrvN~I~PG~v~T~~~~~~~~~~~---~~~~~~--~~~p~------------~r~~~ 219 (274)
T d2pd4a1 160 AKAALESAVRYLAVDLGKHH---IRVNALSAGPIRTLASSGIADFRM---ILKWNE--INAPL------------RKNVS 219 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTTT---CEEEEEEECCCCCTTGGGSTTHHH---HHHHHH--HHSTT------------SSCCC
T ss_pred HHHHHHHHHHhhHHHhcCcC---ceecccccCcccCccccccCchHH---HHHHHh--hhhhc------------cCCcC
Confidence 345555554443332 256 999999999886653322211100 001111 11121 12345
Q ss_pred HHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 171 ADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 171 vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.+|+|+.+++.+... ...||++.|..|-.+
T Consensus 220 pedIA~~v~fL~S~~s~~itG~~i~vDGG~~~ 251 (274)
T d2pd4a1 220 LEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHV 251 (274)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHHhChhhCCCcCceEEECCChhh
Confidence 788999988887643 356999999988743
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=87.08 E-value=3.6 Score=33.01 Aligned_cols=85 Identities=12% Similarity=0.127 Sum_probs=49.1
Q ss_pred chHHHHHHHHHHHHh--cCCCcceeEEeecCCceecccCCCcchhHHHHHHHHHHHhHhCCceeecCCccccccceeccC
Q 045430 93 FYYTQEDILFEEVEK--RKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASD 170 (309)
Q Consensus 93 ~~y~~e~~~~~~~~~--~~~~~~~~~~ilRP~~VyGp~~~~~~~~~~~~~i~~~l~~~~g~~~~~~G~~~~~~~~~~~~~ 170 (309)
+|.+.+.+.+..+.+ ..+ +.+..|.|+.|.-+.... .. ....+. ...|+ | +-+..
T Consensus 175 sKaal~~lt~~lA~e~~~~g---IrVN~I~PG~i~t~~~~~--~~-----~~~~~~--~~~pl---~--------r~~~~ 231 (266)
T d1mxha_ 175 AKHALGGLTRAAALELAPRH---IRVNAVAPGLSLLPPAMP--QE-----TQEEYR--RKVPL---G--------QSEAS 231 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGT---EEEEEEEESSBSCCSSSC--HH-----HHHHHH--TTCTT---T--------SCCBC
T ss_pred hHHHHhhhHHHHHHHhCccC---cEEEEeccCcEeccccCC--HH-----HHHHHH--hcCCC---C--------CCCCC
Confidence 455655554444432 257 999999999886543211 10 011111 12222 1 12245
Q ss_pred HHHHHHHHHHHhcCC--CCCCcceeecCCCcc
Q 045430 171 ADLIAEQHIWAAVDP--YARNEAFNCSNGDVF 200 (309)
Q Consensus 171 vd~la~a~i~aa~~~--~a~g~~fNI~~g~~~ 200 (309)
.+|+|+++++.+... -..||+++|.+|-.+
T Consensus 232 peeva~~v~fL~s~~s~~itG~~i~vDGG~~l 263 (266)
T d1mxha_ 232 AAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 263 (266)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence 788999999888643 357999999887543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=85.16 E-value=0.48 Score=38.72 Aligned_cols=52 Identities=6% Similarity=-0.002 Sum_probs=35.2
Q ss_pred CCccEEEEeecccCC-------C---hHHHHHhHHHHHHHHHHHhCcC-------------CCCCceEEEEeCCc
Q 045430 11 TDVTHIFYVTWASRP-------T---EAENCEVNGAMLRNVLRSVIPN-------------APNLRHVCLQTGGK 62 (309)
Q Consensus 11 ~~vd~V~H~A~~~~~-------~---~~~~~~vNv~gt~nll~a~~~~-------------~~~v~r~v~~Ss~~ 62 (309)
..+|++++.|++... + +++.+++|+.|+.++..++... ..+-.++|.+||..
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~ 156 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 156 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc
Confidence 468999999984211 2 3346799999998888775321 11236789888853
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.08 E-value=0.71 Score=38.22 Aligned_cols=55 Identities=7% Similarity=0.005 Sum_probs=35.6
Q ss_pred CCCccEEEEeecccCC------Ch---HHHHHhHHHHHHHHHHHhCcCC-CCCceEEEEeCCccc
Q 045430 10 LTDVTHIFYVTWASRP------TE---AENCEVNGAMLRNVLRSVIPNA-PNLRHVCLQTGGKHY 64 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~-~~v~r~v~~Ss~~vY 64 (309)
...+|++++.|+.... +. .+.+++|+.|+.++..++...- .+=.++|.+||.+.+
T Consensus 90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~ 154 (269)
T d1xu9a_ 90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK 154 (269)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT
T ss_pred hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc
Confidence 3467999999874211 33 3367999999888877764220 011489999997644
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.79 E-value=0.36 Score=36.54 Aligned_cols=50 Identities=8% Similarity=0.088 Sum_probs=38.3
Q ss_pred CCCCccEEEEeeccc---CCChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeC
Q 045430 9 KLTDVTHIFYVTWAS---RPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~---~~~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss 60 (309)
+++++|+|+.+|+.. ..+..+..+.|+..++.+++++.+++|+ -++++.|
T Consensus 65 ~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~--~iiivvt 117 (144)
T d1mlda1 65 CLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPD--AMICIIS 117 (144)
T ss_dssp HHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTT--SEEEECS
T ss_pred HhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCC--eEEEEec
Confidence 356789999999853 2266779999999999999999998654 4444433
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.14 E-value=0.22 Score=41.68 Aligned_cols=55 Identities=9% Similarity=-0.065 Sum_probs=38.6
Q ss_pred CCCccEEEEeecccCC---------ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeCCccc
Q 045430 10 LTDVTHIFYVTWASRP---------TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHY 64 (309)
Q Consensus 10 ~~~vd~V~H~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss~~vY 64 (309)
...+|+++|.|++... +++..+++|+.|+.++.+++...-..=.|+|.+||....
T Consensus 79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~ 142 (275)
T d1wmaa1 79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV 142 (275)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccee
Confidence 3468999999995322 223367899999999999886431112589999997544
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=81.27 E-value=0.6 Score=35.25 Aligned_cols=51 Identities=16% Similarity=0.337 Sum_probs=39.6
Q ss_pred CCCCccEEEEeeccc-CC--ChHHHHHhHHHHHHHHHHHhCcCCCCCceEEEEeC
Q 045430 9 KLTDVTHIFYVTWAS-RP--TEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60 (309)
Q Consensus 9 ~~~~vd~V~H~A~~~-~~--~~~~~~~vNv~gt~nll~a~~~~~~~v~r~v~~Ss 60 (309)
+++++|+|+-+|+.. .+ +-.+..+.|....+.+.+++.+.+|+- .++.+|-
T Consensus 66 ~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~a-ivivvtN 119 (145)
T d2cmda1 66 ALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKA-CIGIITN 119 (145)
T ss_dssp HHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTS-EEEECSS
T ss_pred ccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCc-EEEEccC
Confidence 456889999999853 22 567799999999999999999987763 3555544
|