Citrus Sinensis ID: 045611

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
Protein Sequence
LATKSSTIAFLRITSGYSLFAVIMGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM
Secondary Structure (PSIPRED)
cccccEEEEEEEEccccccccEEEEEEEEEEcccccccccccccccccccccEEEEEEEEccHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEccHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEHEEEHcccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccEEEEEEEccHHHHHHHHHHHccccEEEccccccccccccccccHHccccccccccccccccccccccccccccHHHHHccccccccccEcc
Coil and Loop (DISEMBL)
latksstiAFLRITSGYSLFAVIMGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEgmkgvtqvevdpkqskltvigyvdpekVLERVRHrtgkkaefwpyvpsdvvprpyapeaydkkappgyvrnvlddpvaaplarassfEVKYttafsdenpnacavm
Flexible Loop (DISEMBL)
latksstiaflriTSGYSLFAVIMGFLEYVSELCDFESrwhshrklkkrkqlqtveikikmdcegcerrvkksvegmkgvtqvevdpkqskltvigyvdpekvlERVRhrtgkkaefwpyvpsdvvprPYAPEAYDKKAPPGYVRNVLDDPVAAPLARASSFEVKyttafsdenpnacavm
Low Complexity Region (SEG)
LATKSSTIAFLRITSGYSLFAVIMGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM
Disordered region (IsUnstruct)
******TIAFLRITSGYSLFAVIMGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKK*V****GVTQVEV***QSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYD***PPGYVRNVLDDPVAAPLARASSFEVKYT**************
Disordered Region (DISOPRED)
*****ST**FLRITSGYSLFAVIMGFLEYVS***********************VEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSD*********************NVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM
Disordered Region (DISEMBL)
LATKSSTIAFLRITSGYSLFAVIMGFLEYVSELCDFESRWH**********LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM
Disordered Region (DISPRO)
****SSTIAFLRITSGYSLFAVIMGFLEYVSELCDFESRW*****LKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
LATKSSTIAFLRITSGYSLFAVIMGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	181	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.845	1.0	0.683	3e-56

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score =  217 bits (552), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 108/158 (68%), Positives = 125/158 (79%), Gaps = 5/158 (3%)

Query: 24  MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
           MG L++VSE+ D     H H K+KKRKQLQTVEIK+KMDCEGCER+V++SVEGMKGV+ V
Sbjct: 1   MGVLDHVSEMFDCS---HGH-KIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSV 56

Query: 84  EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
            ++PK  K+TV+GYVDP KV+ R+ HRTGKK E WPYVP DVV  PYA   YDKKAP GY
Sbjct: 57  TLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGY 116

Query: 144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
           VR V DDP  + LARASS EV+YTTAFSDENP AC VM
Sbjct: 117 VRRV-DDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
357483859	157	Atfp6-like protein [Medicago truncatula]	0.867	1.0	0.791	3e-67
449434130	159	PREDICTED: heavy metal-associated isopre	0.867	0.987	0.75	1e-64
225428033	155	PREDICTED: uncharacterized protein LOC10	0.856	1.0	0.715	2e-59
297797777	147	metal ion binding protein [Arabidopsis l	0.812	1.0	0.734	4e-58
79547451	147	heavy metal transport/detoxification dom	0.745	0.918	0.792	2e-57
225468523	160	PREDICTED: uncharacterized protein LOC10	0.872	0.987	0.681	4e-57
388491530	156	unknown [Lotus japonicus]	0.861	1.0	0.708	7e-57
225468521	160	PREDICTED: uncharacterized protein LOC10	0.872	0.987	0.675	2e-56
255580673	139	metal ion binding protein, putative [Ric	0.723	0.942	0.793	8e-56
357473779	156	Farnesylated protein (ATFP6) [Medicago t	0.861	1.0	0.677	1e-55

>gi|357483859|ref|XP_003612216.1| Atfp6-like protein [Medicago truncatula] gi|355513551|gb|AES95174.1| Atfp6-like protein [Medicago truncatula]

 Score =  259 bits (662), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 125/158 (79%), Positives = 137/158 (86%), Gaps = 1/158 (0%)

Query: 24  MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
           MG L+ +SELC+F    H  RKL KR QLQ VEIK+KMDCEGCERRVKKSVEGMKGVT+V
Sbjct: 1   MGALDIISELCEF-CHVHHGRKLVKRNQLQVVEIKVKMDCEGCERRVKKSVEGMKGVTKV 59

Query: 84  EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
           EV+PKQSKLTV GYV+P KVLERV+H TGKKAEFWPYVP DVVP PYAPEAYDKKAPPGY
Sbjct: 60  EVEPKQSKLTVTGYVEPNKVLERVKHHTGKKAEFWPYVPYDVVPTPYAPEAYDKKAPPGY 119

Query: 144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
           VRNVL DP A+ LAR+S FEVKYTTAFSD+NPNAC +M
Sbjct: 120 VRNVLQDPEASTLARSSPFEVKYTTAFSDDNPNACTIM 157

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434130|ref|XP_004134849.1| PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cucumis sativus] gi|449491302|ref|XP_004158855.1| PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cucumis sativus]

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 120/160 (75%), Positives = 137/160 (85%), Gaps = 3/160 (1%)

Query: 24  MGFLEYVSELCDFESRWHSH--RKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVT 81
           MGFL++ +++C+F S  HSH  +KLKK +QLQ VEIK+KMDCEGC+++VKKSVEGMKGVT
Sbjct: 1   MGFLDHCADVCNF-SHGHSHDSKKLKKNQQLQRVEIKVKMDCEGCQKKVKKSVEGMKGVT 59

Query: 82  QVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPP 141
           +VEVDPK+SKLTV+GYVD  KVL RVRHRTGK AE WPYVP DVV  PYAP AYDKKAPP
Sbjct: 60  EVEVDPKRSKLTVVGYVDSNKVLNRVRHRTGKAAELWPYVPYDVVEHPYAPGAYDKKAPP 119

Query: 142 GYVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
           GYVRNV  +P  APLARA SFEVKYTTAFSDENPNAC +M
Sbjct: 120 GYVRNVAANPEVAPLARAGSFEVKYTTAFSDENPNACVLM 159

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428033|ref|XP_002278879.1| PREDICTED: uncharacterized protein LOC100260571 isoform 1 [Vitis vinifera] gi|359475023|ref|XP_003631570.1| PREDICTED: uncharacterized protein LOC100260571 isoform 2 [Vitis vinifera] gi|147802513|emb|CAN62146.1| hypothetical protein VITISV_016892 [Vitis vinifera] gi|297744607|emb|CBI37869.3| unnamed protein product [Vitis vinifera]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 113/158 (71%), Positives = 128/158 (81%), Gaps = 3/158 (1%)

Query: 24  MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
           MG L++VS L D     H   KLK+RKQLQTVEIK+KMDCEGCER+V+++VEGMKGVTQV
Sbjct: 1   MGALDHVSHLFDCS---HGSSKLKRRKQLQTVEIKVKMDCEGCERKVRRAVEGMKGVTQV 57

Query: 84  EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
           +V PK  KLTV+GYVDP KV+ RV HRTGKKAE WPYVP DVV  PYAP  YDKKAPPGY
Sbjct: 58  DVVPKHHKLTVVGYVDPAKVVSRVAHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPPGY 117

Query: 144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
           VRN  +DP  + LARASS EV+YTTAFSDENP ACA+M
Sbjct: 118 VRNAYEDPQYSHLARASSTEVRYTTAFSDENPAACAIM 155

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797777|ref|XP_002866773.1| metal ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297312608|gb|EFH43032.1| metal ion binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  229 bits (583), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 116/158 (73%), Positives = 128/158 (81%), Gaps = 11/158 (6%)

Query: 24  MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
           MGF     +LC    R H H+KLK   Q Q VEIK+KMDCEGCERRV+KSVEGMKGV++V
Sbjct: 1   MGF----QDLC---YRKH-HKKLK---QFQRVEIKVKMDCEGCERRVRKSVEGMKGVSKV 49

Query: 84  EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
            VDPKQSKLTV G+V P KV+ RV HRTGKKAE WPYVP +VVP PYAP AYDKKAPPGY
Sbjct: 50  TVDPKQSKLTVEGFVQPSKVVHRVMHRTGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGY 109

Query: 144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
           VRN L DP+ APLARASSFEVKYT+AFSDENPNAC +M
Sbjct: 110 VRNALADPLVAPLARASSFEVKYTSAFSDENPNACTIM 147

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79547451|ref|NP_201412.2| heavy metal transport/detoxification domain-containing protein [Arabidopsis thaliana] gi|51969938|dbj|BAD43661.1| atfp6-like protein [Arabidopsis thaliana] gi|51970154|dbj|BAD43769.1| atfp6-like protein [Arabidopsis thaliana] gi|332010777|gb|AED98160.1| heavy metal transport/detoxification domain-containing protein [Arabidopsis thaliana]

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 107/135 (79%), Positives = 118/135 (87%)

Query: 47  KKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLER 106
           KK KQ Q VEIK+KMDCEGCERRV+KSVEGMKGV++V VDPKQSKLTV G+V P KV+ R
Sbjct: 13  KKLKQFQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHR 72

Query: 107 VRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNVLDDPVAAPLARASSFEVKY 166
           V HRTGKKAE WPYVP +VVP PYAP AYDKKAPPGYVRN L DP+ APLARASSFEVKY
Sbjct: 73  VMHRTGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEVKY 132

Query: 167 TTAFSDENPNACAVM 181
           T+AFSD+NPNAC +M
Sbjct: 133 TSAFSDDNPNACTIM 147

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225468523|ref|XP_002272623.1| PREDICTED: uncharacterized protein LOC100256423 [Vitis vinifera]

 Score =  226 bits (575), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 109/160 (68%), Positives = 129/160 (80%), Gaps = 2/160 (1%)

Query: 24  MGFLEYVSELCDFESRWHSHR--KLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVT 81
           MG L+Y S LC+  S   S +  KL+K KQLQTVEIK+KMDCEGCER+V+KSVEGMKGVT
Sbjct: 1   MGALDYFSNLCECRSLHESRQLHKLRKLKQLQTVEIKVKMDCEGCERQVRKSVEGMKGVT 60

Query: 82  QVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPP 141
           QV ++PK +KLTV+GYV+P+KVL RV+HRTGK+   WPYVP D +P PYAP  YD+KAPP
Sbjct: 61  QVVLEPKLNKLTVVGYVEPKKVLHRVKHRTGKRPVMWPYVPYDEIPHPYAPGVYDRKAPP 120

Query: 142 GYVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
           GYVRN   DP  + LARASS EVKYTTAFSD+NPNAC +M
Sbjct: 121 GYVRNPSQDPQVSNLARASSTEVKYTTAFSDDNPNACIIM 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491530|gb|AFK33831.1| unknown [Lotus japonicus]

 Score =  225 bits (573), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 112/158 (70%), Positives = 127/158 (80%), Gaps = 2/158 (1%)

Query: 24  MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
           MG L+++SEL D  S  +S  K KKRKQ QTVE+K+KMDCEGCER+VKKSVEGMKGVTQV
Sbjct: 1   MGALDHISELFDCSSFGNS--KYKKRKQFQTVEVKVKMDCEGCERKVKKSVEGMKGVTQV 58

Query: 84  EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
           EV+ K SK+TV GYV+P KV+ R+ HRTGK+AE WPYVP DVV  PYAP  YDKKAP GY
Sbjct: 59  EVERKASKVTVTGYVEPSKVVARIAHRTGKRAELWPYVPYDVVAHPYAPGVYDKKAPSGY 118

Query: 144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
           VRN   DP  + LARASS EV+YTTAFSDENP ACAVM
Sbjct: 119 VRNSEYDPNVSHLARASSTEVRYTTAFSDENPTACAVM 156

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225468521|ref|XP_002272585.1| PREDICTED: uncharacterized protein LOC100261510 [Vitis vinifera]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/160 (67%), Positives = 128/160 (80%), Gaps = 2/160 (1%)

Query: 24  MGFLEYVSELCDFESRWHSHR--KLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVT 81
           MG L+Y S LC+  S   S +  KL+K KQLQTVEIK+KMDCEGCER+V+KSVEGMKGVT
Sbjct: 1   MGALDYFSNLCECRSLHESRQLHKLRKLKQLQTVEIKVKMDCEGCERQVRKSVEGMKGVT 60

Query: 82  QVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPP 141
           QV ++PK +KLTV+GYV+P+KVL RV+HRTGK+   WPYVP D +P PYAP  YD+KAP 
Sbjct: 61  QVVIEPKLNKLTVVGYVEPKKVLHRVKHRTGKRPVMWPYVPYDEIPHPYAPGVYDRKAPS 120

Query: 142 GYVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
           GYVRN   DP  + LARASS EVKYTTAFSD+NPNAC +M
Sbjct: 121 GYVRNPSQDPQVSNLARASSTEVKYTTAFSDDNPNACIIM 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580673|ref|XP_002531159.1| metal ion binding protein, putative [Ricinus communis] gi|223529272|gb|EEF31244.1| metal ion binding protein, putative [Ricinus communis]

 Score =  221 bits (564), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 104/131 (79%), Positives = 117/131 (89%)

Query: 51  QLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHR 110
           Q QTVEIK+KMDCEGC ++VKKSV+GMKGVT VEV+ KQSKLTV GYVDP KVL+RVRHR
Sbjct: 9   QWQTVEIKVKMDCEGCVKKVKKSVQGMKGVTNVEVERKQSKLTVTGYVDPNKVLQRVRHR 68

Query: 111 TGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNVLDDPVAAPLARASSFEVKYTTAF 170
           TGK+A+FWPY+P D +P PYAP AYD+KAPPGYVRNVL+DP AAPLARASSFEVK T AF
Sbjct: 69  TGKRADFWPYIPYDELPHPYAPGAYDRKAPPGYVRNVLEDPEAAPLARASSFEVKTTAAF 128

Query: 171 SDENPNACAVM 181
           SD+NPNAC VM
Sbjct: 129 SDDNPNACVVM 139

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473779|ref|XP_003607174.1| Farnesylated protein (ATFP6) [Medicago truncatula] gi|355508229|gb|AES89371.1| Farnesylated protein (ATFP6) [Medicago truncatula]

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 107/158 (67%), Positives = 126/158 (79%), Gaps = 2/158 (1%)

Query: 24  MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
           MG L+++S+L D   R  +++K  KRKQ QTVE+K+KMDCEGCER+VKKSVEGMKGVTQV
Sbjct: 1   MGALDHISDLFDCSYRRSTYKK--KRKQFQTVEVKVKMDCEGCERKVKKSVEGMKGVTQV 58

Query: 84  EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
           EVD K SK+TV GYV+P KV+ R+ HRTGK+ E WPYVP DVV  PYAP  YDKKAP GY
Sbjct: 59  EVDRKASKVTVTGYVEPSKVVARMSHRTGKRVELWPYVPYDVVAHPYAPGVYDKKAPSGY 118

Query: 144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
           VRN   DP  + LARASS EV+YTTAFSD+NP ACA+M
Sbjct: 119 VRNANYDPNVSNLARASSAEVRYTTAFSDDNPTACAIM 156

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
TAIR|locus:2156927	147	HIPP27 "heavy metal associated	0.745	0.918	0.792	3.3e-56
TAIR|locus:2121199	153	FP6 "farnesylated protein 6" [	0.845	1.0	0.683	1.1e-53
TAIR|locus:2131561	153	HIPP25 "heavy metal associated	0.845	1.0	0.550	3.1e-44
TAIR|locus:2135277	158	AT4G39700 [Arabidopsis thalian	0.845	0.968	0.525	6.8e-40
TAIR|locus:2026336	152	HIPP20 "heavy metal associated	0.834	0.993	0.553	1.9e-37
TAIR|locus:2017759	152	HIPP22 "heavy metal associated	0.834	0.993	0.528	4.9e-37
TAIR|locus:2157457	149	HIPP21 "heavy metal associated	0.817	0.993	0.515	8e-37
TAIR|locus:2133544	150	AT4G08570 "AT4G08570" [Arabido	0.812	0.98	0.487	2.4e-35
TAIR|locus:2202265	159	AT1G06330 "AT1G06330" [Arabido	0.392	0.446	0.540	5.4e-23
TAIR|locus:4515103273	166	AT3G56891 [Arabidopsis thalian	0.375	0.409	0.478	2.7e-18

TAIR|locus:2156927 HIPP27 "heavy metal associated isoprenylated plant protein 27" [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 107/135 (79%), Positives = 118/135 (87%)

Query:    47 KKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLER 106
             KK KQ Q VEIK+KMDCEGCERRV+KSVEGMKGV++V VDPKQSKLTV G+V P KV+ R
Sbjct:    13 KKLKQFQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHR 72

Query:   107 VRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNVLDDPVAAPLARASSFEVKY 166
             V HRTGKKAE WPYVP +VVP PYAP AYDKKAPPGYVRN L DP+ APLARASSFEVKY
Sbjct:    73 VMHRTGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEVKY 132

Query:   167 TTAFSDENPNACAVM 181
             T+AFSD+NPNAC +M
Sbjct:   133 TSAFSDDNPNACTIM 147

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2121199 FP6 "farnesylated protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 108/158 (68%), Positives = 125/158 (79%)

Query:    24 MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
             MG L++VSE+ D     H H K+KKRKQLQTVEIK+KMDCEGCER+V++SVEGMKGV+ V
Sbjct:     1 MGVLDHVSEMFDCS---HGH-KIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSV 56

Query:    84 EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
              ++PK  K+TV+GYVDP KV+ R+ HRTGKK E WPYVP DVV  PYA   YDKKAP GY
Sbjct:    57 TLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGY 116

Query:   144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
             VR V DDP  + LARASS EV+YTTAFSDENP AC VM
Sbjct:   117 VRRV-DDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2131561 HIPP25 "heavy metal associated isoprenylated plant protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 87/158 (55%), Positives = 116/158 (73%)

Query:    24 MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
             MG L++VSE  D      SH   K+ K LQTV++++ +DCEGCER+V++++EGM+G+  V
Sbjct:     1 MGVLDHVSEYFDC-----SHGSSKRHKSLQTVDVRVLIDCEGCERKVRRALEGMRGIRDV 55

Query:    84 EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
              ++P   K+TV+GYV+P KV+ R+ HRTGK+AE +P+VP DVV  PYA   YD +AP GY
Sbjct:    56 TIEPNAQKVTVVGYVEPNKVVARIIHRTGKRAELYPFVPYDVVAHPYASGVYDNRAPTGY 115

Query:   144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
             VRN   DP  + LARASS EV+YTTAFSDEN +AC VM
Sbjct:   116 VRNTEYDPHVSRLARASSTEVRYTTAFSDENASACVVM 153

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2135277 AT4G39700 [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 83/158 (52%), Positives = 110/158 (69%)

Query:    25 GFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVE 84
             G LEY+SEL       HS+ K KK+KQ QTVE+K++MDC+GC  ++K S+  +KGV  VE
Sbjct:     5 GTLEYISELIG-NGGSHSYGKRKKKKQFQTVELKVRMDCDGCVLKIKNSLSSLKGVKTVE 63

Query:    85 VDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYV 144
             ++ KQ K+TV GY D  KVL++ +  TGKKAE WPYVP ++V +PY  +AYDKKAPPGYV
Sbjct:    64 INKKQQKVTVSGYADASKVLKKAK-ATGKKAEIWPYVPYNLVAQPYIAQAYDKKAPPGYV 122

Query:   145 RNVLDDPVAAPLARASSFE-VKYTTAFSDENPNACAVM 181
             R V  DP       A  ++   YT+ FSD+NPNAC++M
Sbjct:   123 RKV--DPNVTTGTMAVYYDDPSYTSLFSDDNPNACSIM 158

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2026336 HIPP20 "heavy metal associated isoprenylated plant protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 88/159 (55%), Positives = 108/159 (67%)

Query:    24 MGFLEYVSE-LCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQ 82
             MG L+ +SE + D+   +   RK +KRK +QTV IK+KMDC+GCERRVK +V  MKGV  
Sbjct:     1 MGALDSLSEYISDY---FRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKS 57

Query:    83 VEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPG 142
             VEV+ K  K+TV GYV+P+KVL+R+  RTGKKAE WPYVP ++V  PYA   YDKKAP G
Sbjct:    58 VEVNRKIHKVTVSGYVEPKKVLKRIE-RTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAG 116

Query:   143 YVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
             YVR      +   L  A   E  Y + FSDENPNAC VM
Sbjct:   117 YVRKSEQSQLQL-LPGAP--ENHYISLFSDENPNACTVM 152

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2017759 HIPP22 "heavy metal associated isoprenylated plant protein 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 84/159 (52%), Positives = 107/159 (67%)

Query:    24 MGFLEYVSELCDFESRWH-SHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQ 82
             MG L Y+SE   F + ++ S RK KKRK +QTV IK+K+DC+GCER++K +V  +KG   
Sbjct:     1 MGALNYLSEY--FSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKS 58

Query:    83 VEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPG 142
             VEV+ K  K+TV GYVDP+KVL+ V+    KKAE WPYVP  +V  PYA  AYDK+APPG
Sbjct:    59 VEVNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPG 118

Query:   143 YVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
             +VR   +   A P     S + K  + FSDENPNAC VM
Sbjct:   119 FVRKS-EQAQAQP----GSTDDKLMSLFSDENPNACTVM 152

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2157457 HIPP21 "heavy metal associated isoprenylated plant protein 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 82/159 (51%), Positives = 110/159 (69%)

Query:    24 MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
             MG  +Y+S  C +    +++ K K RK LQTV+IK+KMDC+GCERRV+  V  MKGV  V
Sbjct:     1 MGAFDYISSFCSYT---YANAKTK-RKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSV 56

Query:    84 EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
             EV+ KQS++TV G+VDP KVL+RV+  TGKKAEFWPY+P  +V  P+AP  YDK+AP G+
Sbjct:    57 EVNRKQSRITVNGHVDPNKVLKRVKS-TGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGH 115

Query:   144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNA-CAVM 181
             +RN      + P A A   E  Y + FSD+N +A C++M
Sbjct:   116 IRNPTQ---SFPTANAP--EENYVSLFSDDNVHAACSIM 149

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;IGI

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2133544 AT4G08570 "AT4G08570" [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 78/160 (48%), Positives = 106/160 (66%)

Query:    23 IMGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKI-KMDCEGCERRVKKSVEGMKGVT 81
             + G +EY+S+L          RK KK+KQ+QTV +++ ++DCEGCER++K  + G+KGV 
Sbjct:     3 VEGTMEYISDLL-------KKRKRKKKKQMQTVALRVARIDCEGCERKIKHVLSGVKGVK 55

Query:    82 QVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPP 141
              V+VD K  K+TV GY+DP+KVLE  +  T KK E WPYVP  +V  PY  +AYDKKAPP
Sbjct:    56 SVDVDVKLQKVTVTGYIDPKKVLEAAKS-TKKKVELWPYVPYTMVANPYISQAYDKKAPP 114

Query:   142 GYVRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
               VR V D   A+     ++ +  YT  FSDENPN+CA+M
Sbjct:   115 NMVRKVPD--TAS--VNETTVDDSYTIMFSDENPNSCAIM 150

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2202265 AT1G06330 "AT1G06330" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 40/74 (54%), Positives = 56/74 (75%)

Query:    51 QLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHR 110
             QLQT+E+++ MDC GCE RVK +++ M+GV  VE+D  Q K+TV GY D +KVL++VR +
Sbjct:     9 QLQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVR-K 67

Query:   111 TGKKAEFW--PYVP 122
             TG++AE W  PY P
Sbjct:    68 TGRRAELWQLPYNP 81

GO:0005507 "copper ion binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:4515103273 AT3G56891 [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 33/69 (47%), Positives = 52/69 (75%)

Query:    52 LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRT 111
             L  VE+ + MDC+GCE++V++++  + GV  VE+D  + K+TV GYVD E+VL+ V+ RT
Sbjct:    15 LSIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVK-RT 73

Query:   112 GKKAEFWPY 120
             G+ AE+WP+
Sbjct:    74 GRTAEYWPF 82

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	181
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	5e-14
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	9e-10
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	4e-06
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	2e-05
PRK11033	741	PRK11033, zntA, zinc/cadmium/mercury/lead-transpor	7e-04

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 63.0 bits (154), Expect = 5e-14
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)

Query: 56  EIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPEKVLERVRHRTG 112
           E+ ++ M C GC  +++K++E + GV  VEVD +  K TV     V PE++LE +    G
Sbjct: 1   ELSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAI-EDAG 59

Query: 113 KKAE 116
            KA 
Sbjct: 60  YKAR 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 51.8 bits (125), Expect = 9e-10
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 61  MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDP---EKVLERVRH 109
           M C GC ++V+K++  + GV+ V VD +  K+TV G  DP   EK+ + +  
Sbjct: 7   MTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEK 58

Length = 62

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 42.4 bits (100), Expect = 4e-06
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 52  LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLER 106
           +    +K++ M C  C + V+K++E + GV  V+VD ++   TV    D  KV   
Sbjct: 1   MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATV--TFDSNKVDIE 54

Length = 71

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 51  QLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHR 110
           +L T E  + M CEGC   VK  +E ++GV  VEVD     + V+G   P K +     +
Sbjct: 5   ELLT-EFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLG-SSPVKAMTAALEQ 62

Query: 111 TGKKA 115
           TG+KA
Sbjct: 63  TGRKA 67

Length = 238

>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 18/52 (34%), Positives = 25/52 (48%)

Query: 61  MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTG 112
           MDC  C R+V+ +V  + GV QV+V     KL V    D    +E    + G
Sbjct: 62  MDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAG 113

Length = 741

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	181
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.44
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.38
KOG4656	247	consensus Copper chaperone for superoxide dismutas	99.35
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.27
PLN02957	238	copper, zinc superoxide dismutase	98.48
PRK10671	834	copA copper exporting ATPase; Provisional	98.36
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.14
TIGR00003	68	copper ion binding protein. This model describes a	97.87
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.7
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.3
PRK10671	834	copA copper exporting ATPase; Provisional	97.26
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	96.93
TIGR02052	92	MerP mercuric transport protein periplasmic compon	95.28
COG1888	97	Uncharacterized protein conserved in archaea [Func	89.57
PRK13748	561	putative mercuric reductase; Provisional	87.8
cd00371	63	HMA Heavy-metal-associated domain (HMA) is a conse	86.8
PF01206	70	TusA: Sulfurtransferase TusA; InterPro: IPR001455	85.88
PF02680	95	DUF211: Uncharacterized ArCR, COG1888; InterPro: I	80.76

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.44  E-value=5.6e-13  Score=86.42  Aligned_cols=58  Identities=33%  Similarity=0.630  Sum_probs=54.1

Q ss_pred             EEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCc
Q 045611           56 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKK  114 (181)
Q Consensus        56 ~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~  114 (181)
                      +|+| ||+|++|+.+|+++|.+++||.++++|+.+++++|.++   +++++|.++|+ ++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~-~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIE-KAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHH-HTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHH-HhCcC
Confidence            4889 99999999999999999999999999999999999976   46699999999 99984

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.38  E-value=4.6e-12  Score=84.85  Aligned_cols=65  Identities=32%  Similarity=0.504  Sum_probs=58.2

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEe---eCCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIG---YVDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~---~~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      .+..|+| ||+|.+|+.+|+++|.+++||.++++|++.+.+.|..   .++.++|.++|+ ++||.+..+
T Consensus         2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~-~aGy~~~~~   70 (71)
T COG2608           2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIE-DAGYKVEEI   70 (71)
T ss_pred             ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHH-HcCCCeeec
Confidence            4668999 9999999999999999999999999999997776663   379999999999 999988754

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=99.35  E-value=7.7e-13  Score=103.95  Aligned_cols=95  Identities=28%  Similarity=0.420  Sum_probs=80.9

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEccCCCCCCCCCCCC
Q 045611           52 LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYA  131 (181)
Q Consensus        52 ~~~v~l~Vgm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~~~~~~~~~~~~~  131 (181)
                      .-+.+|.|.|+|++|+..|++.|..++||.+|++|++++.+.|.+...+.++..+|+ .+|.++.+.+.+.++++.....
T Consensus         6 ~~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le-~tGr~Avl~G~G~psaval~at   84 (247)
T KOG4656|consen    6 TYEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLE-NTGRDAVLRGAGKPSAVALLAT   84 (247)
T ss_pred             ceeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHH-hhChheEEecCCchhHHHHHHH
Confidence            456789999999999999999999999999999999999999999999999999999 9999999999876665543322


Q ss_pred             CCCC-CCCCCCCCcCCC
Q 045611          132 PEAY-DKKAPPGYVRNV  147 (181)
Q Consensus       132 ~~~y-~~~~~~g~~r~~  147 (181)
                      -+.| .+.+++|++||.
T Consensus        85 ~a~~~~~~~v~GvvRf~  101 (247)
T KOG4656|consen   85 VAKYTGPQAVQGVVRFV  101 (247)
T ss_pred             HHHhcCCccceeEEEEE
Confidence            2333 334788998887

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.27  E-value=4.4e-11  Score=80.44  Aligned_cols=67  Identities=48%  Similarity=0.950  Sum_probs=61.5

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcC-CceEEcc
Q 045611           52 LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTG-KKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~Vgm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G-~~a~~~~  119 (181)
                      ++..++++.|+|++|..+|++.|+.++||.++++|..+++++|.|.+++..|++.|+ +.| .+..+|.
T Consensus         4 ~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~-k~~~k~~~~~~   71 (73)
T KOG1603|consen    4 IKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLK-KTGGKRAELWK   71 (73)
T ss_pred             ccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHH-hcCCCceEEec
Confidence            466778889999999999999999999999999999999999999999999999999 677 7777764

>PLN02957 copper, zinc superoxide dismutase

Probab=98.48  E-value=1.5e-06  Score=71.02  Aligned_cols=71  Identities=30%  Similarity=0.487  Sum_probs=63.5

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEccCCCCC
Q 045611           53 QTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSD  124 (181)
Q Consensus        53 ~~v~l~Vgm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~~~~~~  124 (181)
                      ++++|.++|+|+.|+.+|++.|++++||..+.+++..+++.|.+....+++.++|+ +.||.+++++..+.+
T Consensus         6 ~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~~~~~   76 (238)
T PLN02957          6 LLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALE-QTGRKARLIGQGDPE   76 (238)
T ss_pred             EEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCcEEEecCCCcc
Confidence            55678889999999999999999999999999999999999987778899999999 999999988765543

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.36  E-value=1.2e-06  Score=83.04  Aligned_cols=64  Identities=28%  Similarity=0.512  Sum_probs=57.2

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEcc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      +++++.| ||+|++|+.+|+++|++++||.++++++.  +.+|++..+.+.+.++++ +.||+++...
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~   67 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIK-QAGYDASVSH   67 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHH-hcCCcccccc
Confidence            5788999 99999999999999999999999999994  556666678999999999 9999998754

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.14  E-value=7.4e-06  Score=76.25  Aligned_cols=63  Identities=24%  Similarity=0.550  Sum_probs=56.5

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CC-HHHHHHHHHHhcCCceEE
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VD-PEKVLERVRHRTGKKAEF  117 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~-~~~l~~~I~~~~G~~a~~  117 (181)
                      .+..|.| ||+|..|+.+|| +|++++||..+.+|+.++++.|..+   .+ .+++.++++ +.||.+..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~-~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVE-KAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHH-hcCccccc
Confidence            4567999 999999999999 9999999999999999999998854   44 789999999 99998765

>TIGR00003 copper ion binding protein

Probab=97.87  E-value=0.0002  Score=43.54  Aligned_cols=62  Identities=21%  Similarity=0.396  Sum_probs=51.1

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCce
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKA  115 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a  115 (181)
                      .+..+.+ |++|..|...+++.++..+++....+++...++.+..+   .+...+...+. ..|+.+
T Consensus         2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~   67 (68)
T TIGR00003         2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAIL-DAGYEV   67 (68)
T ss_pred             cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHH-HcCCCc
Confidence            3456899 99999999999999999999999999999999888742   46677777777 777643

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.70  E-value=0.00011  Score=69.15  Aligned_cols=67  Identities=22%  Similarity=0.509  Sum_probs=61.8

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEccC
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      .++.|.| ||.|.+|+.+|++.|.+++||.+++++..++++.|..+   ..+.++.+.|+ .+|+.+.....
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie-~~~~~~~~~~~  216 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIE-ETGFEASVRPY  216 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHH-hhcccceeeec
Confidence            6889999 99999999999999999999999999999999998854   78999999999 99998877664

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.30  E-value=0.00062  Score=64.24  Aligned_cols=67  Identities=22%  Similarity=0.395  Sum_probs=61.0

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEccC
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      .+-.+++ ||+|..|++.|++.|++++|+.++.+.+...+..+..+   .+++.+.+.++ +.|+.+++...
T Consensus        69 ~~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie-~~gf~a~~i~~  139 (951)
T KOG0207|consen   69 SKCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIE-DLGFSAELIES  139 (951)
T ss_pred             ceeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHH-hcCccceehhc
Confidence            4668999 99999999999999999999999999999999998854   78999999999 99999987654

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.26  E-value=0.001  Score=63.34  Aligned_cols=64  Identities=27%  Similarity=0.534  Sum_probs=56.6

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEc
Q 045611           54 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        54 ~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      ++.+.+ ||+|..|..++++.+.+++||..+.+++..+++.+.+..+.+++.+.++ +.||.+.++
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~-~~Gy~a~~~  164 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVE-KAGYGAEAI  164 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHH-hcCCCcccc
Confidence            567889 9999999999999999999999999999999988876567888888998 999987544

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=96.93  E-value=0.003  Score=59.50  Aligned_cols=66  Identities=29%  Similarity=0.321  Sum_probs=54.0

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee-CCHHHHHHHHHHhcCCceEEc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY-VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~-~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      ..+..+.+ ||+|.+|..++++.+.+++||..+.+++..+++.+..+ ...+++.+.++ +.||.+...
T Consensus        52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~-~~Gy~a~~~  119 (741)
T PRK11033         52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQ-KAGFSLRDE  119 (741)
T ss_pred             CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHH-hcccccccc
Confidence            35667889 99999999999999999999999999999999877643 12266777888 889876543

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=95.28  E-value=0.48  Score=31.04  Aligned_cols=62  Identities=21%  Similarity=0.357  Sum_probs=46.6

Q ss_pred             EEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEe---eCCHHHHHHHHHHhcCCceEE
Q 045611           55 VEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIG---YVDPEKVLERVRHRTGKKAEF  117 (181)
Q Consensus        55 v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~---~~~~~~l~~~I~~~~G~~a~~  117 (181)
                      +.+.+ ++.|..|...++..+...+|+....++.......+..   ..+...+...++ ..|+.+++
T Consensus        25 ~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~   90 (92)
T TIGR02052        25 VTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATT-DAGYPSSL   90 (92)
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEe
Confidence            35678 9999999999999999999988888887777755542   135556656666 77877554

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=89.57  E-value=4.1  Score=28.43  Aligned_cols=67  Identities=16%  Similarity=0.260  Sum_probs=43.7

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEe-----cCCCc--EEEEEee-CCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEV-----DPKQS--KLTVIGY-VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~v-----d~~~~--~v~V~~~-~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      ...+.|.+ --+-.--.-.+.+.|.+++||+.|++     |.++.  +++|.|. ++-+++.+.|+ +.|...+.+.
T Consensus         5 iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE-~~Gg~IHSiD   80 (97)
T COG1888           5 IRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIE-ELGGAIHSID   80 (97)
T ss_pred             ceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHH-HcCCeeeehh
Confidence            34556666 33322233345667888888877665     33333  4556664 89999999999 9998766554

>PRK13748 putative mercuric reductase; Provisional

Probab=87.80  E-value=3.1  Score=37.62  Aligned_cols=64  Identities=23%  Similarity=0.392  Sum_probs=49.3

Q ss_pred             EEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEe--eCCHHHHHHHHHHhcCCceEEccC
Q 045611           56 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIG--YVDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        56 ~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~--~~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      .+.+ +|+|..|..+++..+...+++....++.......+..  ..+...+...++ ..|+..++...
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~-~~g~~~~~~~~   69 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVA-GLGYRATLADA   69 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCeeeccCc
Confidence            3668 9999999999999999999998888888888766653  235566666676 77877655543

>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

Probab=86.80  E-value=3.3  Score=22.05  Aligned_cols=54  Identities=39%  Similarity=0.680  Sum_probs=36.0

Q ss_pred             EE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee--CCHHHHHHHHHHhcC
Q 045611           58 KI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPEKVLERVRHRTG  112 (181)
Q Consensus        58 ~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~--~~~~~l~~~I~~~~G  112 (181)
                      .+ ++.|..|...++..+...+|+.....+.......+...  .+...+...++ ..+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   59 (63)
T cd00371           3 SVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIE-DAG   59 (63)
T ss_pred             eECCeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcC
Confidence            35 78899999999998888888777766766666555432  24444434444 444

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.

>PF01206 TusA: Sulfurtransferase TusA; InterPro: IPR001455 SirA functions as a response regulator as part of a two-component system, where BarA is the sensor kinase

Probab=85.88  E-value=3.8  Score=26.35  Aligned_cols=54  Identities=13%  Similarity=0.139  Sum_probs=39.0

Q ss_pred             EEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee--CCHHHHHHHHHHhcCCceEEcc
Q 045611           56 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        56 ~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~--~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      ++.+ |+.|+...-+++++|.+++.         ++.+.|..+  ...+.|...++ +.|+....+.
T Consensus         2 ~lD~rg~~CP~Pll~~~~~l~~l~~---------G~~l~v~~d~~~~~~di~~~~~-~~g~~~~~~~   58 (70)
T PF01206_consen    2 TLDLRGLSCPMPLLKAKKALKELPP---------GEVLEVLVDDPAAVEDIPRWCE-ENGYEVVEVE   58 (70)
T ss_dssp             EEECSS-STTHHHHHHHHHHHTSGT---------T-EEEEEESSTTHHHHHHHHHH-HHTEEEEEEE
T ss_pred             EEeCCCCCCCHHHHHHHHHHHhcCC---------CCEEEEEECCccHHHHHHHHHH-HCCCEEEEEE
Confidence            5778 99999999999999999743         234444433  45677888898 9999855553

This system increases the expression of virulence genes and decreases the expression of motility genes []. BarA phosphorylates SirA, thereby activating the protein. Phosphorylated SirA directly activates virulence expression by interacting with hilA and hilC promoters, while repressing the flagellar regulon indirectly by binding to the csrB promoter, which in turn affects flagellar gene expression. Orthologues of SirA from Salmonella spp. can be found throughout proteobacteria, such as GacA in Psuedomonas spp., VarA in Vibrio cholerae, ExpA in Erwinia carotovora, LetA in Legionella pneumophila, and UvrY in Escherichia coli []. A sensor kinase for SirA is present in each of these organisms as well; the sensor kinase is known as BarA in E. coli and Salmonella spp., but has different names in other genera. In different species, SirA/BarA orthologues are required for virulence gene expression, exoenzyme and antibiotic production, motility, and biofilm formation. The structure of SirA consists of an alpha/beta sandwich with a beta-alpha-beta-alpha-beta(2) fold, comprising a mixed four-stranded beta-sheet stacked against two alpha-helices, both of which are nearly parallel to the strands of the beta-sheet []. Several uncharacterised bacterial proteins (73 to 81 amino-acid residues in length) that contain a well-conserved region in their N-terminal region show structural similarity to the SirA protein, including the E. coli protein YedF (P0AA31 from SWISSPROT), and other members of the UPF0033 family.; GO: 0016783 sulfurtransferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 3LVJ_D 3LVK_B 1DCJ_A 3HZ7_A 1JDQ_A 1JE3_A 1PAV_A.

>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function

Probab=80.76  E-value=5.3  Score=28.05  Aligned_cols=66  Identities=18%  Similarity=0.312  Sum_probs=43.2

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEe-----cCCCcEE--EEEee-CCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEV-----DPKQSKL--TVIGY-VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~v-----d~~~~~v--~V~~~-~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      ..++.|.| -.+-++= -.+-++|.+++||..|++     |..+..+  +|+|+ ++.+++.++|+ +.|-.++...
T Consensus         4 irRlVLDVlKP~~p~i-~e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie-~~Gg~IHSID   78 (95)
T PF02680_consen    4 IRRLVLDVLKPHEPSI-VELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIE-ELGGVIHSID   78 (95)
T ss_dssp             EEEEEEEEEEESSS-H-HHHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHH-HTT-EEEEEE
T ss_pred             eeEEEEEeecCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHH-HcCCeEEeee
Confidence            35666777 4444444 356677999999987765     4444444  45565 99999999999 9997665543

; PDB: 3BPD_I 2RAQ_F 2X3D_E.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	181
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	1e-23
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	1e-18
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	4e-18
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	2e-16
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	1e-15
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	9e-11
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	3e-09
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	7e-08
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	1e-07
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	1e-06
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	2e-06
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	2e-06
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	3e-06
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	4e-06
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	4e-06
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	8e-06
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	7e-06
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	1e-05
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	5e-05
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	1e-05
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	1e-05
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	2e-05
2kyz_A	67	Heavy metal binding protein; structural genomics,	3e-05
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	3e-05
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	4e-05
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	3e-05
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	3e-05
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	4e-05
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	5e-05
2kkh_A	95	Putative heavy metal transporter; zinc transport,	8e-05
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	1e-04
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	2e-04
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	2e-04
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	2e-04
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	3e-04
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	4e-04

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 88.4 bits (219), Expect = 1e-23
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 43  HRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEK 102
                 +  L T+E  ++M C+ C   V+KS++G+ GV  VEV  +   + V   +  ++
Sbjct: 9   ASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQE 68

Query: 103 VLERVRHRTGKKAEFW 118
           V   +   TG++A   
Sbjct: 69  VQALLE-GTGRQAVLK 83

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 78.9 bits (194), Expect = 1e-18
 Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 1/93 (1%)

Query: 55  VEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKK 114
               I M CE C   +K  ++ + G+  +  D +Q  ++V   V P  ++  +R   GK 
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKD 66

Query: 115 AEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNV 147
           A        +                      V
Sbjct: 67  AIIRGAGKPNSSAVAILETFQKYTIDQKKDTAV 99

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 73.6 bits (181), Expect = 4e-18
 Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 52  LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRT 111
           +   E  + M C GC   V + +  + GV + ++D    K+ +      + +L  ++ +T
Sbjct: 1   MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KT 58

Query: 112 GKKAEFW 118
           GK   + 
Sbjct: 59  GKTVSYL 65

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 69.0 bits (169), Expect = 2e-16
 Identities = 13/66 (19%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 51  QLQTVEIKIKMDCEGCERRVKKSVEGMK-GVTQVEVDPKQSKLTVIGYVDPEKVLERVRH 109
           +++  +  + M C GC   V K +  ++  V+++++  ++  + V   +  + +LE+++ 
Sbjct: 3   EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK- 61

Query: 110 RTGKKA 115
           +TGK+ 
Sbjct: 62  KTGKEV 67

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 71.3 bits (174), Expect = 1e-15
 Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 1/93 (1%)

Query: 55  VEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKK 114
               I M CE C   +K  ++ + G+  +  D +Q  ++V   V P  ++  +R   GK 
Sbjct: 9   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKD 67

Query: 115 AEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNV 147
           A        +                      V
Sbjct: 68  AIIRGAGKPNSSAVAILETFQKYTIDQKKDTAV 100

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 54.8 bits (132), Expect = 9e-11
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 41  HSHRKLKKRKQLQTVEIKIK---MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY 97
           H H   ++    Q   +      M C  C   +K ++E       V  DP    + V G 
Sbjct: 8   HHHSSGRENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV 67

Query: 98  VDPEKVLERVR 108
            D   + E + 
Sbjct: 68  SDAAHIAEIIT 78

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 50.0 bits (120), Expect = 3e-09
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 54  TVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVR 108
           T+++ +  + CE C   V K+V+       V+VD    K+T+   +  E++   + 
Sbjct: 2   TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA 57

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 46.5 bits (111), Expect = 7e-08
 Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 55  VEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGK 113
           +++K++ M C  C   V K+++ + GV +VEV  ++ +  V G  DP+ +++ V    G 
Sbjct: 2   LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVE-EEGY 60

Query: 114 KAE 116
           KAE
Sbjct: 61  KAE 63

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 45.7 bits (109), Expect = 1e-07
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 54  TVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI--GYVDPEKVLERVR 108
               ++  + C  C  +++K V  ++GV+ ++V  ++  + V        + + E + 
Sbjct: 2   KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL 59

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 43.1 bits (102), Expect = 1e-06
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVR 108
           QTV + +  M C  C   VKK++  ++GV++V+V  +  +  V         +K+ +   
Sbjct: 3   QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 13/61 (21%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 52  LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERV 107
           ++   ++++ M C+ C + V+ SV  + GV+ V V+ +  K+ V      V  + + + +
Sbjct: 1   MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI 60

Query: 108 R 108
            
Sbjct: 61  E 61

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 52  LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERV 107
           + +V I ++ M C  C   +++ +  + GV  ++V  ++   T+I       P+ + E +
Sbjct: 1   VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAI 60

Query: 108 R 108
            
Sbjct: 61  D 61

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 12/62 (19%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 51  QLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLER 106
            ++ + ++++ M C  C   ++ SV+ + GV QV+V   +  + V      V  + ++  
Sbjct: 3   AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAV 62

Query: 107 VR 108
           + 
Sbjct: 63  IE 64

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 42.0 bits (99), Expect = 4e-06
 Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 4/62 (6%)

Query: 51  QLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLER 106
            + +V I ++ M C  C   +++ +  + GV  ++V  ++   T+I       P+ + E 
Sbjct: 6   GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEA 65

Query: 107 VR 108
           + 
Sbjct: 66  ID 67

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 43.6 bits (103), Expect = 4e-06
 Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 51  QLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLER 106
           + + + +++  M C  C  R++K ++ M GVT   V+     + VI          + E+
Sbjct: 4   EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEK 63

Query: 107 VR 108
           + 
Sbjct: 64  IE 65

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 42.8 bits (101), Expect = 8e-06
 Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 51  QLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLER 106
             +  E  I+ M C  C  R++K +  ++GV    V+     +TV           + E 
Sbjct: 72  VTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEA 131

Query: 107 VRH 109
           V  
Sbjct: 132 VDK 134

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 41.2 bits (97), Expect = 7e-06
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 55  VEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI--GYVDPEKVLERVR 108
             +KI  M C+ C   VK+++E + GV    V   +    +       P+ +   V 
Sbjct: 2   THLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA 58

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVR 108
           Q   ++IK M C  C   ++++++   GV  V V     K  +      + P ++ + ++
Sbjct: 4   QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ 63

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 4/64 (6%)

Query: 49  RKQLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVL 104
                 +E+ I  M C  C   ++  +    G+T   V    SK  V      + P  ++
Sbjct: 76  AGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDII 135

Query: 105 ERVR 108
           + + 
Sbjct: 136 KIIE 139

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 52  LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERV 107
           ++ +++ +  M C  C   V+ ++  + GV +  V   Q++  V+     V  E + E +
Sbjct: 1   MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEI 60

Query: 108 R 108
            
Sbjct: 61  E 61

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 52  LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERV 107
           L+T ++++  M C  C   +++++E +KGV +  V     +LTV      V    + ER+
Sbjct: 2   LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERI 61

Query: 108 R 108
            
Sbjct: 62  A 62

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRT 111
           +    ++  + C  C  + +++V+ ++GVT+  V+   SK+TV G    ++V E+     
Sbjct: 3   EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQV-EQAGAFE 61

Query: 112 GKKAE 116
             K  
Sbjct: 62  HLKII 66

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67

 Score = 39.8 bits (93), Expect = 3e-05
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 61  MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVR 108
           + C  C+ R+ K++E + GV   EV  ++ K+ V    + + VL+++ 
Sbjct: 10  ISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVV-ETENLDSVLKKLE 55

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 12/97 (12%), Positives = 30/97 (30%), Gaps = 6/97 (6%)

Query: 51  QLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLER 106
            + T++++I  M C+ C   +++++  + GV  ++V  +     V        P  +   
Sbjct: 18  HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRA 77

Query: 107 VR--HRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPP 141
           +        K                +        P 
Sbjct: 78  IEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPR 114

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 19/127 (14%)

Query: 1   LATKSSTIAF-LRITSGYSLFAVI--MGFLEYVSELCD----------FESRWHSHRKLK 47
           L  K++ + +    TS  +L   I  +    +   L D            S        +
Sbjct: 55  LENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPR 114

Query: 48  KRKQ--LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPE 101
            + Q    T  I I  M C  C   ++  +  ++GV Q+ V   +   TV+     + PE
Sbjct: 115 NQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPE 174

Query: 102 KVLERVR 108
           ++   + 
Sbjct: 175 ELRAAIE 181

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 4/60 (6%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVR 108
           Q   I I  M C  C + ++  +    GV  + V    S  TV        PE +   + 
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 39.3 bits (92), Expect = 3e-05
 Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 52  LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVR 108
           ++ + +++  + C  C  RVKK++E   G    +VD  ++ +      D +K ++ V 
Sbjct: 4   VEKIVLELSGLSCHHCVARVKKALEEA-GAKVEKVDLNEAVVAG-NKEDVDKYIKAVE 59

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score = 39.3 bits (92), Expect = 4e-05
 Identities = 9/60 (15%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVR 108
             +++K++ M C  C   ++  +  ++GV +++V     + T++     +  E++ +++ 
Sbjct: 9   VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 39.0 bits (91), Expect = 8e-05
 Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 47  KKRKQLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEK 102
           KK K+LQ     +  + C      ++  ++ + GV +  V      + V+     + P +
Sbjct: 10  KKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQ 69

Query: 103 VLERVR 108
           + + + 
Sbjct: 70  IAKALN 75

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 51  QLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLER 106
           + + + +++  M C  C  R++K ++ M GVT   V+     + VI          + E+
Sbjct: 4   EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEK 63

Query: 107 VR 108
           + 
Sbjct: 64  IE 65

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 4/58 (6%)

Query: 55  VEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVR 108
            E  +K M C  C  R++++V  + GV +V+V  K+ K  V      V   ++ + + 
Sbjct: 2   QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN 59

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI--GYVDPEKVLERVRH 109
           QT+ ++++ M C  C   +++++  + GV   +V+    +  V   G   P+ + + V  
Sbjct: 3   QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE- 61

Query: 110 RTGKKAE 116
           R G  A 
Sbjct: 62  RAGYHAR 68

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 54  TVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVR 108
           T    I  M C+ C   ++ ++  ++ V+ + V  +     V+     V PE + + + 
Sbjct: 4   TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE 62

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 53 QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTV 94
               K+  MDC  C R+V+ +V  + GV QV+V     KL V
Sbjct: 3  TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVV 45

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI--GYVDPEKVLERV 107
           + V + +  M C  C   +   +  +KGVT+ ++    ++  V     V  + + E +
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEII 59

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	181
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.57
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.48
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.46
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.45
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.43
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.35
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.3
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.29
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.29
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.27
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.27
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.26
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.25
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.24
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.24
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.24
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.23
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.22
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.22
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.21
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.21
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.2
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.2
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.2
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.17
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.17
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.17
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.16
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.13
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.13
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.11
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.08
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.06
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.04
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	99.0
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.97
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.93
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.91
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.62
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.62
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.53
2x3d_A	96	SSO6206; unknown function; 2.70A {Sulfolobus solfa	81.53
3bpd_A	100	Uncharacterized protein; heptamer, Mg+2 ION, PSI-2	80.2

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.57  E-value=1.1e-14  Score=94.69  Aligned_cols=67  Identities=21%  Similarity=0.493  Sum_probs=62.3

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEccC
Q 045611           52 LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        52 ~~~v~l~Vgm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      |.+.+|.|||+|.+|+.+|+++|++++|| ++++|+.+++++|.+.+++++|.++|+ ++||++++|++
T Consensus         1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~   67 (68)
T 3iwl_A            1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLGL   67 (68)
T ss_dssp             -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTCSCEEEEEC
T ss_pred             CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCceEecCC
Confidence            35677888999999999999999999999 999999999999999899999999999 99999999874

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.48  E-value=2.3e-13  Score=89.25  Aligned_cols=68  Identities=22%  Similarity=0.422  Sum_probs=62.5

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEccC
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      |++++|.| ||+|.+|+.+|+++|++++||.++++|+..++++|..+   ++.++|.++|+ ++||+++++..
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~   72 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILAE   72 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEccC
Confidence            46788999 99999999999999999999999999999999999853   68999999999 99999988763

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.46  E-value=4.3e-13  Score=86.61  Aligned_cols=65  Identities=25%  Similarity=0.524  Sum_probs=60.0

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEE--eeCCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI--GYVDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~--~~~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      ++++|.| ||+|.+|+.+|+++|++++||..+++|+.+++++|.  ..+++++|.++|+ ++||++++.
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence            4678999 999999999999999999999999999999999998  4588999999999 999998763

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.45  E-value=3.8e-13  Score=88.43  Aligned_cols=66  Identities=23%  Similarity=0.422  Sum_probs=62.3

Q ss_pred             CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEcc
Q 045611           51 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        51 ~~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      .|.+.+|.| ||+|.+|+.+|+++|++ +||..+++|+..++++|..+ +.++|.++|+ ++||.+++.+
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~-~~Gy~~~~~~   69 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVE-AAGYQAKLRS   69 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHH-HTTCEEEECC
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHH-HcCCceEecC
Confidence            467889999 99999999999999999 99999999999999999988 9999999999 9999998876

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.43  E-value=1.1e-12  Score=85.82  Aligned_cols=67  Identities=19%  Similarity=0.465  Sum_probs=62.6

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhcCC-CceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKIKMDCEGCERRVKKSVEGMK-GVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~Vgm~C~~C~~kI~kaL~~l~-GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      +.+.+|+|.|+|.+|+.+|+++|++++ ||.++++|+.+++++|.+..+.+++.++|+ ++||++.+|.
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCCceeee
Confidence            466788889999999999999999999 999999999999999998889999999999 9999998875

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.35  E-value=1.2e-11  Score=86.30  Aligned_cols=70  Identities=29%  Similarity=0.458  Sum_probs=64.7

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEccCCC
Q 045611           52 LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVP  122 (181)
Q Consensus        52 ~~~v~l~Vgm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~~~~  122 (181)
                      +.+++|+|.|+|.+|+.+|+++|++++||.++++|+..++++|.+.++.++|.++|+ ++||++.++...+
T Consensus        18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~-~~Gy~~~~~~~~~   87 (98)
T 2crl_A           18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLE-GTGRQAVLKGMGS   87 (98)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEESCC
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCceEEccCCC
Confidence            467788889999999999999999999999999999999999998889999999999 9999999987644

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.30  E-value=2.2e-11  Score=78.05  Aligned_cols=64  Identities=20%  Similarity=0.428  Sum_probs=58.0

Q ss_pred             CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCce
Q 045611           51 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKA  115 (181)
Q Consensus        51 ~~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a  115 (181)
                      .+.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.++|.+.|+ ++||.+
T Consensus         3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   70 (71)
T 2l3m_A            3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDV   70 (71)
T ss_dssp             SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEE
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCC
Confidence            356778999 99999999999999999999999999999999999753   67889999999 999975

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.29  E-value=7.3e-12  Score=78.46  Aligned_cols=60  Identities=22%  Similarity=0.473  Sum_probs=56.2

Q ss_pred             EEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCce
Q 045611           55 VEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKA  115 (181)
Q Consensus        55 v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a  115 (181)
                      ..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+.+++.++|+ ++||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHH-HTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence            46899 9999999999999999999999999999999999997788999999999 999975

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.29  E-value=7.1e-12  Score=79.86  Aligned_cols=62  Identities=32%  Similarity=0.564  Sum_probs=56.9

Q ss_pred             EEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEc
Q 045611           56 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        56 ~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      .|.| ||+|.+|+.+|+++|++++||.++++|+..++++|.+..+.+++.++|+ ++||.+...
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVE-EEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHH-TTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHH-HcCCCcEec
Confidence            5889 9999999999999999999999999999999999965678999999999 999987653

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.27  E-value=3.6e-11  Score=77.12  Aligned_cols=65  Identities=25%  Similarity=0.387  Sum_probs=58.6

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      .+..|.| ||+|.+|+.+|+++|.+++||..+++|+..+++.|..+   .+.+++.+.|+ ++||.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   71 (72)
T 1osd_A            3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK   71 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence            5678999 99999999999999999999999999999999999854   57889999999 999987653

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.27  E-value=4e-11  Score=76.54  Aligned_cols=65  Identities=22%  Similarity=0.448  Sum_probs=57.8

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee--CCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~--~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      ++..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+  .+.+++.+.|+ ++||.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~   70 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL   70 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCceeC
Confidence            5678999 99999999999999999999999999999999999854  67888999999 999987653

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.26  E-value=9.1e-12  Score=84.67  Aligned_cols=65  Identities=22%  Similarity=0.338  Sum_probs=58.6

Q ss_pred             CCceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCce
Q 045611           50 KQLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKA  115 (181)
Q Consensus        50 ~~~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a  115 (181)
                      ..+.+.+|.| ||+|.+|+.+|+++|++++||.++++|+..++++|...++.++|.++|+ ++||.+
T Consensus        19 ~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~-~~Gy~~   84 (85)
T 2k2p_A           19 FQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIIT-AAGYTP   84 (85)
T ss_dssp             ---CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHH-HTTCCC
T ss_pred             ccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence            3456778999 9999999999999999999999999999999999998889999999999 999964

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.25  E-value=3.8e-11  Score=80.43  Aligned_cols=67  Identities=16%  Similarity=0.369  Sum_probs=60.9

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEccC
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   ++.+++.+.|+ ++||.+.+...
T Consensus         9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~   79 (84)
T 1q8l_A            9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQ   79 (84)
T ss_dssp             EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCC
Confidence            5678999 99999999999999999999999999999999999864   57889999999 99999887764

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.24  E-value=2.6e-11  Score=79.36  Aligned_cols=67  Identities=19%  Similarity=0.317  Sum_probs=60.9

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      |+++.|.| ||+|.+|+.+|+++|.+++||..+++++..++++|..+   ++.+++.++|+ ++||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   72 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIE   72 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEES
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECC
Confidence            57788999 99999999999999999999999999999999999853   57889999999 9999987765

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.24  E-value=8.2e-11  Score=76.35  Aligned_cols=66  Identities=21%  Similarity=0.427  Sum_probs=59.4

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEcc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+   ++.+++.+.|+ ++||.+.+..
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   71 (75)
T 3cjk_B            2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN   71 (75)
T ss_dssp             EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEEE
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEeec
Confidence            3467999 99999999999999999999999999999999999854   57889999999 9999987764

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.24  E-value=7.7e-11  Score=76.31  Aligned_cols=66  Identities=27%  Similarity=0.325  Sum_probs=58.3

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeC-CHHHHHHHHHHhcCCceEEc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYV-DPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~-~~~~l~~~I~~~~G~~a~~~  118 (181)
                      |.+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+. ..++|.+.|+ ++||.+...
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~~   69 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE   69 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEEC
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCccccc
Confidence            56778999 999999999999999999999999999999999998642 3678899999 999987653

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.23  E-value=5.3e-11  Score=76.28  Aligned_cols=65  Identities=25%  Similarity=0.344  Sum_probs=58.4

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      ++..|.| ||+|.+|+.+|+++|.+++||..+++|+..+++.|..+   ++.+++.+.|+ ++||.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   71 (72)
T 1aw0_A            3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence            4567999 99999999999999999999999999999999999864   57889999999 999987653

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.22  E-value=5.1e-11  Score=81.34  Aligned_cols=67  Identities=16%  Similarity=0.296  Sum_probs=59.8

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhc---CCceEEccC
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRT---GKKAEFWPY  120 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~---G~~a~~~~~  120 (181)
                      .++.|.| ||+|.+|+.+|+++|++++||.++++|+..++++|..+   ++.++|.++|+ ++   ||++.++.+
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~   76 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSE   76 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCC
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCC
Confidence            4567999 99999999999999999999999999999999999853   57889999999 99   598887764

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.22  E-value=9.5e-11  Score=73.67  Aligned_cols=62  Identities=23%  Similarity=0.437  Sum_probs=56.0

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCce
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKA  115 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a  115 (181)
                      .+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+   .+.+.+.+.|+ ++||.+
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   67 (69)
T 2qif_A            2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV   67 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence            4567999 99999999999999999999999999999999999853   57889999999 999865

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.21  E-value=8e-11  Score=75.97  Aligned_cols=67  Identities=21%  Similarity=0.444  Sum_probs=59.7

Q ss_pred             CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 045611           51 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        51 ~~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      .+.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+   .+.+++.+.|+ ++||.+.++
T Consensus         4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   74 (76)
T 1opz_A            4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE   74 (76)
T ss_dssp             CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred             cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence            356778999 99999999999999999999999999999999999753   57889999999 999987654

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.21  E-value=1.1e-10  Score=74.84  Aligned_cols=65  Identities=20%  Similarity=0.399  Sum_probs=59.1

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee--CCHHHHHHHHHHhcCCceEEcc
Q 045611           54 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        54 ~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~--~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      +..|.| ||+|.+|+.+|+++|.+++||..+++|+..+++.|..+  .+.+++.+.|+ +.||.+.++.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence            457999 99999999999999999999999999999999999854  57889999999 9999988875

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.20  E-value=9.1e-11  Score=74.21  Aligned_cols=61  Identities=28%  Similarity=0.484  Sum_probs=56.0

Q ss_pred             EEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEE
Q 045611           56 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEF  117 (181)
Q Consensus        56 ~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~  117 (181)
                      .|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   .+.+++.+.|+ +.||.+++
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~   67 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEV   67 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEE
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCccc
Confidence            5889 99999999999999999999999999999999999854   57889999999 99998765

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.20  E-value=6.7e-11  Score=77.64  Aligned_cols=67  Identities=21%  Similarity=0.430  Sum_probs=60.2

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      ..+..|.| ||+|.+|+.+|+++|.+++||..+++|+..+++.|..+   ++.+++.++|+ ++||.+.+.+
T Consensus         7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   77 (79)
T 1kvi_A            7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN   77 (79)
T ss_dssp             CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECC
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecC
Confidence            46678999 99999999999999999999999999999999999854   57889999999 9999887654

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.20  E-value=5.5e-11  Score=75.83  Aligned_cols=62  Identities=26%  Similarity=0.415  Sum_probs=56.1

Q ss_pred             EEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee--CCHHHHHHHHHHhcCCceEEc
Q 045611           56 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        56 ~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~--~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      .|.| ||+|.+|+.+|+++|++++||..+++|+..+++.|..+  .+.++|.+.|+ ++||.+.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~   67 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA   67 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence            4889 99999999999999999999999999999999998754  57889999999 999987653

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.17  E-value=2.7e-10  Score=78.09  Aligned_cols=73  Identities=15%  Similarity=0.207  Sum_probs=63.9

Q ss_pred             ccCCceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEccCC
Q 045611           48 KRKQLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWPYV  121 (181)
Q Consensus        48 ~~~~~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~~~  121 (181)
                      ....|.+..|.| ||+|.+|+.+|+++|..++||..+.+++..+++.|..+   ++.+.+.+.|+ .+||.+.+...+
T Consensus        11 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~   87 (95)
T 2kkh_A           11 KVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVNG   87 (95)
T ss_dssp             CSSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCCC
T ss_pred             cccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecCC
Confidence            334567889999 99999999999999999999999999999999999854   57889999999 999998876643

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.17  E-value=1.5e-10  Score=75.73  Aligned_cols=67  Identities=24%  Similarity=0.379  Sum_probs=60.1

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      |.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+   .+.+++.+.|+ ++||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~   72 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKG   72 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECC
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecC
Confidence            45678999 99999999999999999999999999999999999753   57889999999 9999988765

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.17  E-value=1.1e-10  Score=73.36  Aligned_cols=61  Identities=16%  Similarity=0.381  Sum_probs=54.9

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee--CCHHHHHHHHHHhcCCce
Q 045611           54 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPEKVLERVRHRTGKKA  115 (181)
Q Consensus        54 ~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~--~~~~~l~~~I~~~~G~~a  115 (181)
                      +..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+  .+.+++.+.|+ ++||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~   65 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV   65 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence            346899 99999999999999999999999999999999999854  47888999999 999864

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.16  E-value=1.4e-10  Score=73.60  Aligned_cols=64  Identities=27%  Similarity=0.489  Sum_probs=57.0

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceE
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAE  116 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~  116 (181)
                      +.+..|.| ||+|.+|+.+|+++|.+++||..+++|+..+++.|..+   .+.+++.+.++ ++||.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~   69 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA   69 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence            35567999 99999999999999999999999999999999999753   56788999999 9999764

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.13  E-value=8.2e-11  Score=75.12  Aligned_cols=60  Identities=23%  Similarity=0.414  Sum_probs=54.3

Q ss_pred             EEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEE
Q 045611           55 VEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEF  117 (181)
Q Consensus        55 v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~  117 (181)
                      ..|.| ||+|.+|+.+|+++|+++ ||..+++|+..++++|..+.+ +++.++|+ ++||.+..
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~-~~Gy~~~~   63 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLE-EIDYPVES   63 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHH-TTTCCCCB
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHH-HcCCceee
Confidence            46999 999999999999999999 999999999999999987644 88999999 99997654

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.13  E-value=2.1e-10  Score=74.05  Aligned_cols=65  Identities=15%  Similarity=0.378  Sum_probs=57.5

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+++|+..+++.|..+   ++.+++.+.|+ ++||.+.+.
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   72 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLV   72 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEES
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceee
Confidence            3467999 99999999999999999999999999999999999864   45688999999 999987654

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.08  E-value=3.8e-10  Score=82.58  Aligned_cols=65  Identities=22%  Similarity=0.391  Sum_probs=59.1

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      .++.|.| ||+|.+|+.+|+++|++++||.++++|+..++++|..+   ++.++|.++|+ ++||++.++
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~  148 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA  148 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence            5678999 99999999999999999999999999999999999854   57899999999 999987653

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.06  E-value=5.6e-10  Score=82.07  Aligned_cols=67  Identities=24%  Similarity=0.372  Sum_probs=61.1

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEccC
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      .++.|.| ||+|.+|+.+|+++|++++||.++++|+..++++|..+   ++.++|.++|+ ++||++.++..
T Consensus        74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~  144 (151)
T 1p6t_A           74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE  144 (151)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCS
T ss_pred             cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCc
Confidence            5678999 99999999999999999999999999999999999853   68899999999 99999887653

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.04  E-value=1.1e-09  Score=87.46  Aligned_cols=70  Identities=23%  Similarity=0.418  Sum_probs=64.0

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEccCCCC
Q 045611           53 QTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPS  123 (181)
Q Consensus        53 ~~v~l~Vgm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~~~~~  123 (181)
                      .+++|+|.|+|.+|+.+|+++|++++||.++++|+..++++|.+.+++++|.++|+ ++||++.++...+.
T Consensus         6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~-~~Gy~a~~~~~~~~   75 (222)
T 1qup_A            6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP   75 (222)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEECCSCT
T ss_pred             eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHH-HcCCccccccCCCc
Confidence            45578888999999999999999999999999999999999998889999999999 99999999876554

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=99.00  E-value=9.4e-10  Score=70.78  Aligned_cols=59  Identities=24%  Similarity=0.511  Sum_probs=51.3

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceE
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAE  116 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~  116 (181)
                      .+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|.++.+    .+.|+ ++||.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~-~~Gy~~~   62 (71)
T 2aj0_A            3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVE-QAGAFEH   62 (71)
T ss_dssp             CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHH-HHHTTTT
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHH-HhCCCcc
Confidence            3567999 9999999999999999999999999999999999987654    45777 8888644

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.97  E-value=2.9e-09  Score=82.60  Aligned_cols=67  Identities=24%  Similarity=0.410  Sum_probs=60.1

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEccC
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   ++.++|.++|+ ++||.+.++..
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~  192 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSE  192 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC--
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCC
Confidence            5678999 99999999999999999999999999999999999853   57899999999 99999888764

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.93  E-value=4.1e-09  Score=85.47  Aligned_cols=70  Identities=23%  Similarity=0.418  Sum_probs=63.7

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEccCCCC
Q 045611           53 QTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPS  123 (181)
Q Consensus        53 ~~v~l~Vgm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~~~~~  123 (181)
                      .+++|+|.|+|.+|+.+|+++|++++||.++++|+..++++|....++++|.++|+ ++||++.++...+.
T Consensus         7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~~~~   76 (249)
T 1jk9_B            7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP   76 (249)
T ss_dssp             EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTTCCCEEEEESST
T ss_pred             eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHH-HhCCCcccccCCcc
Confidence            45578888999999999999999999999999999999999998889999999999 99999988876544

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.91  E-value=5.4e-09  Score=76.33  Aligned_cols=67  Identities=19%  Similarity=0.308  Sum_probs=59.9

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      |+++.|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+   .+.+++.+.|+ +.||.+.+..
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~   73 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME   73 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence            57788999 99999999999999999999999999999999998753   57789999999 9999887643

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.62  E-value=8.1e-08  Score=74.39  Aligned_cols=65  Identities=17%  Similarity=0.359  Sum_probs=55.8

Q ss_pred             CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhc---CCceE
Q 045611           51 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRT---GKKAE  116 (181)
Q Consensus        51 ~~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~---G~~a~  116 (181)
                      .+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+   ++.+++.+.|+ ++   ||.+.
T Consensus        18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~   89 (202)
T 2rop_A           18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVS   89 (202)
T ss_dssp             --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEE
T ss_pred             ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEE
Confidence            356778999 99999999999999999999999999999999999854   57888999998 88   35553

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.62  E-value=1.5e-07  Score=68.81  Aligned_cols=63  Identities=22%  Similarity=0.491  Sum_probs=55.5

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCce
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKA  115 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a  115 (181)
                      +.+..|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+   .+.+.+.+.++ +.||.+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   71 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV   71 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence            35567999 99999999999999999999999999999999988743   57788999998 999864

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.53  E-value=2e-07  Score=85.70  Aligned_cols=63  Identities=17%  Similarity=0.300  Sum_probs=57.7

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEE
Q 045611           54 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEF  117 (181)
Q Consensus        54 ~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~  117 (181)
                      +++|+| ||+|.+|+.+|+++|++++||.++++|+.+++++|..+   ++.+++.++|+ +.||++..
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~~   69 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVVD   69 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEESS
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCcccc
Confidence            357999 99999999999999999999999999999999999853   68999999999 99998754

>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}

Probab=81.53  E-value=4.1  Score=27.67  Aligned_cols=66  Identities=11%  Similarity=0.231  Sum_probs=46.1

Q ss_pred             ceEEEEEE--cCcChhHHHHHHHHHhcCCCceEEEe-----cCCCcEE--EEEee-CCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKI--KMDCEGCERRVKKSVEGMKGVTQVEV-----DPKQSKL--TVIGY-VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~V--gm~C~~C~~kI~kaL~~l~GV~~v~v-----d~~~~~v--~V~~~-~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      ..++.|.|  .++-+.-. .+-+.|.+++||..|++     |..+..+  +|+|+ ++.+++.++|+ +.|-.++...
T Consensus         4 irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IHSID   79 (96)
T 2x3d_A            4 IRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIHSID   79 (96)
T ss_dssp             EEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred             eEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence            35566666  34555544 56677999999987765     4444444  45565 99999999999 9997766544

>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1

Probab=80.20  E-value=4.4  Score=27.65  Aligned_cols=66  Identities=15%  Similarity=0.225  Sum_probs=47.0

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEe-----cCCCcEE--EEEee-CCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEV-----DPKQSKL--TVIGY-VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~v-----d~~~~~v--~V~~~-~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      ..++.|.| -.+-+.-. .+-+.|.+++||..|++     |..+..+  +|+|+ ++.+++.++|+ +.|-.+..+.
T Consensus         6 iRRlVLDVlKPh~P~iv-dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvIHSID   80 (100)
T 3bpd_A            6 LRRLVLDVLKPHEPKTI-VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSVD   80 (100)
T ss_dssp             EEEEEEEEEEESCSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEEE
T ss_pred             ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence            46677777 44545443 56677999999988765     4455544  45565 99999999999 9997766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	181
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-14
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	4e-13
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-12
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	3e-11
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	1e-10
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	2e-09
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-09
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	3e-09
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	1e-08
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	2e-08
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	2e-08
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	4e-08
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	4e-08
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	4e-06

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.3 bits (154), Expect = 1e-14
 Identities = 13/66 (19%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 51  QLQTVEIKIKMDCEGCERRVKKSVEGMK-GVTQVEVDPKQSKLTVIGYVDPEKVLERVRH 109
           +++  +  + M C GC   V K +  ++  V+++++  ++  + V   +  + +LE+++ 
Sbjct: 2   EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK- 60

Query: 110 RTGKKA 115
           +TGK+ 
Sbjct: 61  KTGKEV 66

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.4 bits (144), Expect = 4e-13
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 54  TVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGK 113
                I M CE C   +K  ++ + G+  +  D +Q  ++V   V P  ++  +R   GK
Sbjct: 7   EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGK 65

Query: 114 KAEFW 118
            A   
Sbjct: 66  DAIIR 70

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 57.9 bits (140), Expect = 1e-12
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 55  VEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKK 114
            E  + M C GC   V + +  + G  + ++D    K+ +      + +L  ++ +TGK 
Sbjct: 3   HEFSVDMTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIESEHSMDTLLATLK-KTGKT 60

Query: 115 AEFW 118
             + 
Sbjct: 61  VSYL 64

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 54.4 bits (131), Expect = 3e-11
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVR 108
           QTV + +  M C  C   VKK++  ++GV++V+V  +  +  V         +K+ +   
Sbjct: 3   QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

Query: 109 HRTGKKAE 116
              G  + 
Sbjct: 63  -DAGYPSS 69

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 52.6 bits (126), Expect = 1e-10
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 54  TVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTG 112
           T+++ +  + CE C   V K+V+       V+VD    K+T+   +  E++   +    G
Sbjct: 2   TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAG 60

Query: 113 KKAE 116
            + E
Sbjct: 61  HEVE 64

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.7 bits (119), Expect = 2e-09
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI--GYVDPEKVLERVRH 109
           + V + +  M C  C   +   +  +KGVT+ ++    ++  V     V  + + E +  
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE- 60

Query: 110 RTGKKAE 116
             G   E
Sbjct: 61  DCGFDCE 67

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (119), Expect = 2e-09
 Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 52  LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERV 107
           + +V I ++ M C  C   +++ +  + GV  ++V  ++   T+I       P+ + E +
Sbjct: 7   VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAI 66

Query: 108 RHRTGKKAE 116
               G  A 
Sbjct: 67  D-DMGFDAV 74

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 49.0 bits (117), Expect = 3e-09
 Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 51  QLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLER 106
           + + + +++  M C  C  R++K ++ M GVT   V+     + VI          + E+
Sbjct: 4   EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEK 63

Query: 107 VR 108
           + 
Sbjct: 64  IE 65

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (114), Expect = 1e-08
 Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 5/68 (7%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVR 108
           Q   I I  M C  C + ++  +    GV  + V    S  TV        PE +   + 
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 109 HRTGKKAE 116
              G  A 
Sbjct: 63  -DMGFDAT 69

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 46.7 bits (111), Expect = 2e-08
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)

Query: 56  EIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVRHRT 111
           E  +K M C  C  R++++V  + GV +V+V  K+ K  V      V   ++ + +    
Sbjct: 3   EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-EL 61

Query: 112 GKKAE 116
           G +AE
Sbjct: 62  GYQAE 66

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 46.8 bits (111), Expect = 2e-08
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 5/68 (7%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERVR 108
           +  E  I+ M C  C  R++K +  ++GV    V+     +TV           + E V 
Sbjct: 2   EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 61

Query: 109 HRTGKKAE 116
            + G K +
Sbjct: 62  -KLGYKLK 68

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 46.3 bits (110), Expect = 4e-08
 Identities = 13/61 (21%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 52  LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI---GYVDPEKVLERV 107
           ++   ++++ M C+ C + V+ SV  + GV+ V V+ +  K+ V      V  + + + +
Sbjct: 1   MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI 60

Query: 108 R 108
            
Sbjct: 61  E 61

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 46.0 bits (109), Expect = 4e-08
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVD-PEKVLERVRHR 110
                K+  MDC  C R+V+ +V  + GV QV+V     KL V    D   +V   ++ +
Sbjct: 3   TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-K 61

Query: 111 TGKKAE 116
            G    
Sbjct: 62  AGYSLR 67

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 4e-06
 Identities = 11/68 (16%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 53  QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVR 108
             +++K++ M C  C   ++  +  ++GV +++V     + T++     +  E++ +++ 
Sbjct: 9   VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

Query: 109 HRTGKKAE 116
              G  A 
Sbjct: 69  -AMGFPAF 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	181
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.68
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.68
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.65
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.6
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.58
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.58
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.58
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.57
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.56
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.55
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.53
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.52
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.5
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.48
d3bpda1	91	Uncharacterized protein AF1549 {Archaeoglobus fulg	82.6
d1jdqa_	98	Hypothetical protein TM0983 {Thermotoga maritima [	82.07
d1dcja_	81	SirA {Escherichia coli [TaxId: 562]}	80.63

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=1e-16  Score=105.15  Aligned_cols=66  Identities=24%  Similarity=0.472  Sum_probs=63.2

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEcc
Q 045611           53 QTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        53 ~~v~l~Vgm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      .+.+|.|+|+|++|+.+|+++|++++||.++++|+.+++++|++.+++++|+++|+ ++||++.+++
T Consensus         6 ~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~-~~G~~A~l~g   71 (72)
T d1qupa2           6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRG   71 (72)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEEC
T ss_pred             EEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHH-HhCCCEEEec
Confidence            56689999999999999999999999999999999999999999999999999999 9999999875

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.68  E-value=8.6e-17  Score=103.85  Aligned_cols=64  Identities=22%  Similarity=0.503  Sum_probs=61.1

Q ss_pred             EEEEEEcCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEEcc
Q 045611           54 TVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        54 ~v~l~Vgm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      +.+|+|+|+|.+|+.+|+++|++++|+ ++++|+.+++++|++++++++|+++|+ ++||++++++
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~-~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHH-HhCCeEEEee
Confidence            468999999999999999999999998 699999999999999999999999999 9999999986

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=6e-16  Score=101.46  Aligned_cols=66  Identities=20%  Similarity=0.495  Sum_probs=62.3

Q ss_pred             CceEEEEEEcCcChhHHHHHHHHHhcC-CCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceEE
Q 045611           51 QLQTVEIKIKMDCEGCERRVKKSVEGM-KGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEF  117 (181)
Q Consensus        51 ~~~~v~l~Vgm~C~~C~~kI~kaL~~l-~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~~  117 (181)
                      ++++++|+|+|+|.+|+.+|+++|+++ +||.++++|+.+++++|.+++++++|.++|+ ++||++.-
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~-~~G~~~~~   68 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRS   68 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHH-HHCCccCC
Confidence            468899999999999999999999999 4999999999999999999999999999999 99999864

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=1.6e-15  Score=99.27  Aligned_cols=66  Identities=20%  Similarity=0.401  Sum_probs=61.7

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEe--eCCHHHHHHHHHHhcCCceEEcc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIG--YVDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~--~~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      +++.|.| ||+|++|+.+|+++|.+++||.++++|+.+++++|..  .+++++|.++|+ ++||+++++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHH-HTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHH-HhCCCeEEcc
Confidence            5788999 9999999999999999999999999999999999985  388999999999 9999999875

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.58  E-value=8.3e-16  Score=98.46  Aligned_cols=62  Identities=24%  Similarity=0.505  Sum_probs=59.0

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEeeCCHHHHHHHHHHhcCCceE
Q 045611           54 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAE  116 (181)
Q Consensus        54 ~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~~~~~~l~~~I~~~~G~~a~  116 (181)
                      +++|.| ||+|++|+.+|+++|++++||.++++|+.+++++|.+++++++|.++|+ ++||+++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~-~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHH-HHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHH-HcCCCCC
Confidence            367999 9999999999999999999999999999999999999999999999999 9999874

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.58  E-value=5.1e-15  Score=96.81  Aligned_cols=65  Identities=25%  Similarity=0.387  Sum_probs=61.1

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      +++.|+| ||+|.+|+.+|+++|++++||.++++|+.++++.|+.+   ++.++|.++|+ ++||+++++
T Consensus         3 qt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~a~v~   71 (72)
T d1osda_           3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK   71 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEeC
Confidence            6789999 99999999999999999999999999999999999853   78999999999 999999875

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.58  E-value=4.3e-15  Score=96.14  Aligned_cols=62  Identities=27%  Similarity=0.467  Sum_probs=58.1

Q ss_pred             EEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 045611           56 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        56 ~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      +|+| ||+|.+|+.+|+++|++++||.++++|+.+++++|+.+   +++++|.++|+ ++||+++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hhCCCcEEC
Confidence            5899 99999999999999999999999999999999999853   78999999999 999999863

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.57  E-value=7.8e-15  Score=95.13  Aligned_cols=63  Identities=22%  Similarity=0.444  Sum_probs=59.0

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCce
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKA  115 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a  115 (181)
                      |++.+|+| ||+|++|+.+|+++|++++||.++++|+..++++|..+   ++.++|.+.|+ ++||++
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HhCCcc
Confidence            56788999 99999999999999999999999999999999999953   78999999999 999986

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=9.1e-15  Score=95.53  Aligned_cols=65  Identities=25%  Similarity=0.344  Sum_probs=60.5

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      ++..|+| ||+|.+|+.+|+++|.+++||.++++|+.+++++|..+   ++.++|.++|+ ++||++.+.
T Consensus         3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~a~l~   71 (72)
T d2aw0a_           3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSEEEEC
T ss_pred             EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hhCCCcEeC
Confidence            5678999 99999999999999999999999999999999999853   78999999999 999998764

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.8e-14  Score=95.81  Aligned_cols=69  Identities=20%  Similarity=0.406  Sum_probs=64.1

Q ss_pred             CCceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEcc
Q 045611           50 KQLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        50 ~~~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      ..+.++.|.| ||+|.+|+.+|+++|++++||.++++|+.+++++|+.+   ++.++|.++|+ ++||++.+..
T Consensus         5 ~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~GY~~~~~~   77 (79)
T d1kvja_           5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN   77 (79)
T ss_dssp             TTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred             CCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hcCCCcEeCC
Confidence            3478899999 99999999999999999999999999999999999853   79999999999 9999998865

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.3e-14  Score=96.41  Aligned_cols=69  Identities=16%  Similarity=0.341  Sum_probs=63.5

Q ss_pred             CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEccC
Q 045611           51 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        51 ~~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      ...+++|+| ||+|.+|+.+|+++|++++||.++++|+.+++++|..+   ++.++|.++|+ ++||++.+...
T Consensus         7 ~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~-~~Gy~a~~~~~   79 (84)
T d1q8la_           7 GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQ   79 (84)
T ss_dssp             SCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCC
T ss_pred             CCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHH-HhCCccEEcCC
Confidence            447889999 99999999999999999999999999999999999854   78999999999 99999988764

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.52  E-value=2.7e-14  Score=93.19  Aligned_cols=63  Identities=22%  Similarity=0.491  Sum_probs=58.7

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEe---eCCHHHHHHHHHHhcCCce
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIG---YVDPEKVLERVRHRTGKKA  115 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~---~~~~~~l~~~I~~~~G~~a  115 (181)
                      .++++|+| ||+|++|+.+|+++|++++||.++++|+..++++|..   .++.++|.++|+ ++||++
T Consensus         5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~-~~Gy~v   71 (72)
T d1p6ta1           5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV   71 (72)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred             ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-HhCCcc
Confidence            36789999 9999999999999999999999999999999999984   378999999999 999975

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.50  E-value=3.7e-14  Score=94.24  Aligned_cols=67  Identities=24%  Similarity=0.372  Sum_probs=62.2

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee---CCHHHHHHHHHHhcCCceEEccC
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPEKVLERVRHRTGKKAEFWPY  120 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~---~~~~~l~~~I~~~~G~~a~~~~~  120 (181)
                      .+++|.| ||+|++|+.+|+++|..++||.++++|+.+++++|+.+   ++.++|.++|+ ++||++.+.+.
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~   72 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE   72 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHH-HHCCceEECCc
Confidence            5678999 99999999999999999999999999999999999853   78999999999 99999998764

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=5.8e-14  Score=91.91  Aligned_cols=65  Identities=28%  Similarity=0.349  Sum_probs=58.9

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee-CCHHHHHHHHHHhcCCceEEc
Q 045611           53 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY-VDPEKVLERVRHRTGKKAEFW  118 (181)
Q Consensus        53 ~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~-~~~~~l~~~I~~~~G~~a~~~  118 (181)
                      ++++|.| ||+|++|+.+|+++|.+++||.++++|+.+++++|..+ ...++|.++|+ ++||.+...
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~-~~GY~v~~~   69 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE   69 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCCCCBC
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHH-HcCCcccCC
Confidence            5678999 99999999999999999999999999999999999865 45789999999 999987653

>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein AF1549
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.60  E-value=4.1  Score=25.76  Aligned_cols=66  Identities=15%  Similarity=0.225  Sum_probs=47.4

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEe-----cCCCcEE--EEEee-CCHHHHHHHHHHhcCCceEEcc
Q 045611           52 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEV-----DPKQSKL--TVIGY-VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        52 ~~~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~v-----d~~~~~v--~V~~~-~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      .+++.|.| --+-+.-.. +-+.|.+++||..|++     |..+..+  +|+|. ++-+++.++|+ +.|-..+...
T Consensus         4 irRlVLDVlKPh~p~~~~-~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE-~~Gg~IHSID   78 (91)
T d3bpda1           4 LRRLVLDVLKPHEPKTIV-FALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSVD   78 (91)
T ss_dssp             EEEEEEEEEEESCSCHHH-HHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEEE
T ss_pred             eeEEEEEeecCCCCCHHH-HHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHH-HcCCeEEEEh
Confidence            46677777 445555544 7778999999987765     4445444  44565 99999999999 9997766543

>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: Hypothetical protein TM0983
species: Thermotoga maritima [TaxId: 2336]

Probab=82.07  E-value=2.5  Score=26.98  Aligned_cols=53  Identities=21%  Similarity=0.279  Sum_probs=39.8

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee--CCHHHHHHHHHHhcCCceE
Q 045611           54 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPEKVLERVRHRTGKKAE  116 (181)
Q Consensus        54 ~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~--~~~~~l~~~I~~~~G~~a~  116 (181)
                      ..++.+ |..|+...-+++++|++++.         ++.+.|..+  ...+.|.+.++ +.|+.+.
T Consensus        26 ~~~LD~rG~~CP~Pll~~kkal~~l~~---------Ge~L~V~~dd~~a~~dI~~~~~-~~g~~i~   81 (98)
T d1jdqa_          26 TKTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVK-KLGHEVL   81 (98)
T ss_dssp             CEEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHH-HSSCCEE
T ss_pred             CeeEECCCCcCCHHHHHHHHHHHcCCC---------CCEEEEEeCCcchHHHHHHHHH-HcCCEEE
Confidence            346899 99999999999999998743         223444432  45677888888 9999874

>d1dcja_ d.68.3.3 (A:) SirA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: SirA
species: Escherichia coli [TaxId: 562]

Probab=80.63  E-value=2.1  Score=26.13  Aligned_cols=56  Identities=13%  Similarity=0.092  Sum_probs=41.4

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEecCCCcEEEEEee--CCHHHHHHHHHHhcCCceEEcc
Q 045611           54 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPEKVLERVRHRTGKKAEFWP  119 (181)
Q Consensus        54 ~v~l~V-gm~C~~C~~kI~kaL~~l~GV~~v~vd~~~~~v~V~~~--~~~~~l~~~I~~~~G~~a~~~~  119 (181)
                      ..+|.+ |+.|+.-.-+++++|++++.         .+.+.|..+  ...+.|...++ +.|+.+..+.
T Consensus         9 ~~~lD~~G~~CP~P~l~~k~al~~~~~---------G~~l~v~~dd~~a~~di~~~~~-~~g~~~~~~~   67 (81)
T d1dcja_           9 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCT-FMEHELVAKE   67 (81)
T ss_dssp             SEEECCTTCCTTHHHHHHHHHHHHCCT---------TCCEEEEECSTTHHHHHHHHHH-HTTCEEEEEE
T ss_pred             CeEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEeCCCcHHHHHHHHHH-HcCCEEEEEE
Confidence            457888 99999999999999998743         223444432  45677888888 9999876554