Citrus Sinensis ID: 045639

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MEEAQEEVLMINSNNKDQQSHNNNIVKGKRTKRQRPQSPVPFVVNGTIHDNTNLSSSPAVSSAEEFFDSTEEDEDMANCLILLAQCQSTRESPPKPKPAHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPMAVVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSSKQQQQQQQQQQPQQQQKSSLVFTAAAALVDCHY
Secondary Structure (PSIPRED)
cHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHEEcccccccccHHHHHHHHcccccccccccccccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccHHHccccccccccEEEEEcccHHccccc
Coil and Loop (DISEMBL)
MEEAQEEVLMINsnnkdqqshnnnivkgkrtkrqrpqspvpfvvngtihdntnlssspavssaeeffdsteedEDMANCLILLAQcqstresppkpkpahydihEQEEIAQLQInnnvnnsgmkfnsrrfleapgtgtgtgkggcyvyecktcnrtfpsfqalgghrashkkpkamlmnddrlslkSQHQQQQQQQFLVsksddeeedgnfrngnsskvhecsicgaeftsgqalgghmrrhrsapVAATAAAMATTnttlsltpmavveagqdqprkssssssssrnnllsldldlnlpapeddpkesklpfssKQQQQQQQQqqpqqqqkSSLVFTAAAALVDCHY
Flexible Loop (DISEMBL)
MEEAQEEVLminsnnkdqqshnnnivkgkrtkrqrpqspVPFVVNGTihdntnlssspavSSAEEFFDSTEEDEDMANCLILLAQCQSTRESPPKPKPAHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEApgtgtgtgkgGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNfrngnsskvhECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPMAVVEAGQdqprkssssssssrnNLLSLDLDLNLPAPEDDPKESKLPFSSKQQQQQQQQQqpqqqqksSLVFTAAAALVDCHY
Low Complexity Region (SEG)
MEEAQEEVLMINSNNKDQQSHNNNIVKGKRTKRQRPQSPVPFVVNGTIHDNTNLSSSPAVssaeeffdsteededMANCLILLAQCQSTRESPPKPKPAHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPgtgtgtgkggCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSqhqqqqqqqFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRsapvaataaamattnttlsltpmaVVEAGQDQPRKssssssssrnnllsldldlnlPAPEDDPKESKLPFSSKqqqqqqqqqqpqqqqKSSLVFTAAAALVDCHY
Disordered region (IsUnstruct)
****************************************************************************ANCLILLAQC*******************************************FLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQAL**********************************************************CSICGAEFT**********************************************************************************************************************
Disordered Region (DISOPRED)
****************************************************************************ANCLILL******************************************************************CKTCNRTFPSFQAL*******************************************************VHECSICGAEFTSGQALGGHM******************************************************DLDLNLPAPEDDPKE*****************************TAAAALVDCHY
Disordered Region (DISEMBL)
********LMINSNNKDQQSHNNNIVK**********SPVPFVVNGTIHDNTNLS******************EDMANCLILLAQCQS************YDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQA**********PKAMLMNDDR******************************NGNSSKVHECSICGAEFTSGQA******************AMATTNTTLSLTPMAVVE******************NLLSLDLDLNLPAP********************************LVFTAAAALVDCHY
Disordered Region (DISPRO)
*******V*****NNKD****NNNIVKGKRTKRQRPQSPVPFVVNG************************EEDEDMANCLILLAQC*********************************************************GCYVYECKTCNRTFPSFQALG*****************************************************KVHECSICGAEFTSGQAL*******************************************************LSLDLDLNLPAPED*******************QQQPQQQQKSSLVFTAAAALVDCHY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEAQEEVLMINSNNKDQQSHNNNIVKGKRTKRQRPQSPVPFVVNGTIHDNTNLSSSPAVSSAEEFFDSTEEDEDMANCLILLAQCQSTRESPPKPKPAHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPMAVVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSSKQQQQQQQQQQPQQQQKSSLVFTAAAALVDCHY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	348	2.2.26 [Sep-21-2011]
Q681X4	286	Zinc finger protein ZAT5	no	no	0.709	0.863	0.378	2e-43
Q9SLD4	178	Zinc finger protein ZAT11	no	no	0.307	0.601	0.38	5e-17
Q42453	168	Zinc finger protein ZAT7	no	no	0.318	0.660	0.366	2e-16
Q42410	162	Zinc finger protein ZAT12	no	no	0.316	0.679	0.392	2e-16
Q9LX85	164	Zinc finger protein ZAT8	no	no	0.229	0.487	0.442	2e-14
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.339	0.375	0.343	4e-14
Q39092	267	Zinc finger protein ZAT1	no	no	0.215	0.280	0.428	4e-12
Q42430	261	Zinc finger protein 1 OS=	N/A	no	0.390	0.521	0.318	1e-11
Q9M202	288	Zinc finger protein ZAT9	no	no	0.204	0.246	0.397	2e-11
Q9SSW1	245	Zinc finger protein AZF1	no	no	0.252	0.359	0.422	3e-11

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score =  176 bits (446), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/349 (37%), Positives = 164/349 (46%), Gaps = 102/349 (29%)

Query: 25  IVKGKRTKRQRPQSPVPFVVNG----------------TIHDNTNLSSSPAVSSAEEFFD 68
           I+KGKRTKRQR  S                         + D  N + S  V++     D
Sbjct: 15  IIKGKRTKRQRSSSTFVVTAATTVTSTSSSAGGSGGERAVSDEYNSAVSSPVTT-----D 69

Query: 69  STEEDEDMANCLILLAQCQSTRESPPKPKPAHYDIHEQEEIAQLQINNNVNNSGMKFNSR 128
            T+E+EDMA CLI+LA+          P P   D+    +I Q      +++    F   
Sbjct: 70  CTQEEEDMAICLIMLAR------GTVLPSP---DLKNSRKIHQ-----KISSENSSF--- 112

Query: 129 RFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSL--- 185
                            YVYECKTCNRTF SFQALGGHRASHKKP+       RL L   
Sbjct: 113 -----------------YVYECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQP 155

Query: 186 -KSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRS 244
             S  ++ Q   F VS S    +  N  N  ++KVHECSICG+EFTSGQALGGHMRRHR+
Sbjct: 156 KSSASEEGQNSHFKVSGSALASQASNIIN-KANKVHECSICGSEFTSGQALGGHMRRHRT 214

Query: 245 A-----PVAATAAAMATTNTTLSLTPMAVVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNL 299
           A     PVAATA    + N+T     + +  +  +Q RK              L LDLNL
Sbjct: 215 AVTTISPVAATAE--VSRNSTEEEIEINIGRS-MEQQRK-------------YLPLDLNL 258

Query: 300 PAPEDDPKESKLPFSSKQQQQQQQQQQPQQQQKSSLVFTAAAALVDCHY 348
           PAPEDD +ESK                        +VF+A  AL+DCHY
Sbjct: 259 PAPEDDLRESKF---------------------QGIVFSATPALIDCHY 286

Probable transcription factor that may be involved in stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 69/150 (46%), Gaps = 43/150 (28%)

Query: 148 YECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEE 207
           +ECKTCN+ F SFQALGGHRASHKKPK                       L  +  D + 
Sbjct: 47  FECKTCNKRFSSFQALGGHRASHKKPK-----------------------LTVEQKDVKH 83

Query: 208 DGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPMA 267
             N   GN    H+CSIC   F +GQALGGHMRRHRS+     +           ++PM 
Sbjct: 84  LSNDYKGN--HFHKCSICSQSFGTGQALGGHMRRHRSSMTVEPSF----------ISPMI 131

Query: 268 VVEAGQDQPRKSSSSSSSSRNNLLSLDLDL 297
                   P         S   +LSLDL+L
Sbjct: 132 --------PSMPVLKRCGSSKRILSLDLNL 153

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q42453|ZAT7_ARATH Zinc finger protein ZAT7 OS=Arabidopsis thaliana GN=ZAT7 PE=2 SV=1

 Score = 87.4 bits (215), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 70/150 (46%), Gaps = 39/150 (26%)

Query: 147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEE 206
           V+ CKTC + F SFQALGGHRASHKK    L+N D  SL                     
Sbjct: 39  VFRCKTCLKEFSSFQALGGHRASHKK----LINSDNPSLL-------------------- 74

Query: 207 EDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPM 266
             G+  N  +   H C ICG +F  GQALGGHMRRHR+  V+ +    +    T ++T +
Sbjct: 75  --GSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTRSFLPETTTVTAL 132

Query: 267 AVVEAGQDQPRKSSSSSSSSRNNLLSLDLD 296
               +G+             R   L LDLD
Sbjct: 133 KKFSSGK-------------RVACLDLDLD 149

Probable transcription factor involved in oxidative stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q42410|ZAT12_ARATH Zinc finger protein ZAT12 OS=Arabidopsis thaliana GN=ZAT12 PE=2 SV=1

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 73/153 (47%), Gaps = 43/153 (28%)

Query: 147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEE 206
           V+ CKTC + F SFQALGGHRASHKKP     N+D LS                      
Sbjct: 38  VFTCKTCLKQFHSFQALGGHRASHKKP-----NNDALS---------------------- 70

Query: 207 EDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPM 266
             G  +   +S  H C ICG EF  GQALGGHMRRHR+   AA  A +     T +L P 
Sbjct: 71  -SGLMKKVKTSS-HPCPICGVEFPMGQALGGHMRRHRNESGAAGGALV-----TRALLP- 122

Query: 267 AVVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNL 299
                   +P  ++   SSS   +  LDL L +
Sbjct: 123 --------EPTVTTLKKSSSGKRVACLDLSLGM 147

Transcriptional repressor involved in light acclimation, cold and oxidative stress responses. May regulate a collection of transcripts involved in response to high-light, cold and oxidative stress.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LX85|ZAT8_ARATH Zinc finger protein ZAT8 OS=Arabidopsis thaliana GN=ZAT8 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 54/104 (51%), Gaps = 24/104 (23%)

Query: 141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVS 200
           G G   V+ CKTC + F SFQALGGHRASHKK    L+N    SL      ++ +     
Sbjct: 30  GGGEKRVFRCKTCLKEFSSFQALGGHRASHKK----LINSSDPSLLGSLSNKKTK----- 80

Query: 201 KSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRS 244
                          ++  H C ICG EF  GQALGGHMRRHRS
Sbjct: 81  ---------------TATSHPCPICGVEFPMGQALGGHMRRHRS 109

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 78/166 (46%), Gaps = 48/166 (28%)

Query: 148 YECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEE 207
           ++C+TC + F S+QALGGHRASHKK KA +         ++ +Q + +  L  K      
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNKACM---------TKTEQVETEYVLGVK------ 238

Query: 208 DGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPMA 267
                     KVHEC IC   FTSGQALGGH R H S   A            LS++ + 
Sbjct: 239 --------EKKVHECPICFRVFTSGQALGGHKRSHGSNIGAGRG---------LSVSQIV 281

Query: 268 VVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPF 313
            +E              S +  +    +DLNLPAP ++  E+ L F
Sbjct: 282 QIE-----------EEVSVKQRM----IDLNLPAP-NEEDETSLVF 311

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 51/98 (52%), Gaps = 23/98 (23%)

Query: 148 YECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEE 207
           +EC+TC + F S+QALGGHRASHKK  A     D+L                      +E
Sbjct: 160 FECETCEKVFKSYQALGGHRASHKKKIA---ETDQLG--------------------SDE 196

Query: 208 DGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSA 245
               +  ++S  HEC IC   FTSGQALGGH R H SA
Sbjct: 197 LKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSHASA 234

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q42430|ZFP1_WHEAT Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 18/154 (11%)

Query: 148 YECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEE 207
           ++C  C ++F S+QALGGH+ SH+  +    +D   +             L S       
Sbjct: 90  FKCSVCGKSFSSYQALGGHKTSHRVKQPSPPSDA--AAAPLVALPAVAAILPSAEPATSS 147

Query: 208 DGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPMA 267
                +G +++VH CSIC  EF +GQALGGH R+H    V A     A ++T L     A
Sbjct: 148 TAASSDGATNRVHRCSICQKEFPTGQALGGHKRKHYDGGVGA-----AASSTELLAAAAA 202

Query: 268 VVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNLPA 301
             E G      + + SS++R        DLN+PA
Sbjct: 203 ESEVG-----STGNGSSAARA------FDLNIPA 225

Potential transcription factor which binds the nonamer motif 5'-CATCCAACG-3'. Possibly involved in regulating transcription of the histone H3 and H4 genes.

Triticum aestivum (taxid: 4565)

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 27/98 (27%)

Query: 148 YECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQ---FLVSKSDD 204
           Y+C+TC + F S+QALGGHRASHKK        +R+S     Q+ + +     +V+K   
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKK--------NRVSNNKTEQRSETEYDNVVVVAK--- 221

Query: 205 EEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRH 242
                        ++HEC IC   F SGQALGGH R H
Sbjct: 222 -------------RIHECPICLRVFASGQALGGHKRSH 246

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW1|AZF1_ARATH Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 148 YECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEE 207
           Y+C  C ++F S+QALGGH+ SH+KP          S+ S +Q+        S S     
Sbjct: 97  YKCTVCGKSFSSYQALGGHKTSHRKPT-------NTSITSGNQELSNNSHSNSGSVVINV 149

Query: 208 DGNFRNG--NSSKVHECSICGAEFTSGQALGGHMRRH 242
             N  NG   S K+H CSIC   F SGQALGGH R H
Sbjct: 150 TVNTGNGVSQSGKIHTCSICFKSFASGQALGGHKRCH 186

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	348
224100711	301	predicted protein [Populus trichocarpa]	0.818	0.946	0.487	3e-62
356574689	299	PREDICTED: zinc finger protein ZAT5-like	0.790	0.919	0.498	3e-61
15237697	362	C2H2-type zinc finger protein [Arabidops	0.853	0.820	0.401	8e-61
224109860	291	predicted protein [Populus trichocarpa]	0.781	0.934	0.483	7e-59
297806415	362	zinc finger family protein [Arabidopsis	0.856	0.823	0.408	3e-56
15228303	398	C2H2-type zinc finger protein [Arabidops	0.905	0.791	0.411	9e-56
356533870	312	PREDICTED: zinc finger protein ZAT5-like	0.801	0.894	0.476	1e-53
297829584	397	hypothetical protein ARALYDRAFT_478379 [	0.885	0.775	0.413	1e-52
449449507	341	PREDICTED: zinc finger protein ZAT5-like	0.732	0.747	0.416	5e-46
1786136	341	PEThy;ZPT2-6 [Petunia x hybrida]	0.847	0.865	0.375	4e-45

>gi|224100711|ref|XP_002311984.1| predicted protein [Populus trichocarpa] gi|222851804|gb|EEE89351.1| predicted protein [Populus trichocarpa]

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 161/330 (48%), Positives = 208/330 (63%), Gaps = 45/330 (13%)

Query: 25  IVKGKRTKRQRPQSPVPFVVNGTIHDNTNLSSSPAVSSAEEFFDSTEEDEDMANCLILLA 84
           + KGKRTKR R QS +PF +          ++    +S +EF DSTEE+EDMANCLILLA
Sbjct: 11  VAKGKRTKRLRVQSAIPFGLTTDSSSGDGGTNWSPTTSIDEFQDSTEEEEDMANCLILLA 70

Query: 85  QCQSTRESPPKPKPAHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGG 144
           +  S R+ P + +  H+  H+ +    +           KFNSR+FLE   + TG+G+ G
Sbjct: 71  KGHS-RDFPKQQQHHHHRDHDHDSRGGVYT--------AKFNSRKFLETANS-TGSGRVG 120

Query: 145 CYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDR---LSLKSQHQQQQQQ---QFL 198
            YVYECKTC+RTFPSFQALGGHRASHKKPKA + ND++   LS+ S  +    +      
Sbjct: 121 YYVYECKTCSRTFPSFQALGGHRASHKKPKA-IHNDEKKQNLSISSDEEDGHYKNVSSLS 179

Query: 199 VSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTN 258
           +  S++    G + N N  K+HECS+CGA FTSGQALGGHMRRHR   V++T        
Sbjct: 180 LQLSENNTNRGTYSNHNKGKIHECSVCGAVFTSGQALGGHMRRHRGPLVSST-------- 231

Query: 259 TTLSLTPMAVVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSSKQQ 318
           TTLSLTPM +     ++P+++         N+LSLDLDLNLPAPEDD    K  F+SKQQ
Sbjct: 232 TTLSLTPMTIE---SEEPKRA--------RNVLSLDLDLNLPAPEDD----KFAFASKQQ 276

Query: 319 QQQQQQQQPQQQQKSSLVFTAAAALVDCHY 348
           Q+QQQ    Q+QQ +SLVFT + ALVDCHY
Sbjct: 277 QKQQQ----QKQQNTSLVFT-SPALVDCHY 301

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574689|ref|XP_003555478.1| PREDICTED: zinc finger protein ZAT5-like [Glycine max]

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 184/369 (49%), Positives = 222/369 (60%), Gaps = 94/369 (25%)

Query: 3   EAQEEVLMINSNNKDQQSHNNNIVKGKRTKRQRPQSPVPFVV--NGTIHDN--------- 51
           EA EE+ +  S +      + NIVKGKRTKR RPQSP+PF +  N +  +          
Sbjct: 2   EAPEELSLGGSKD------HTNIVKGKRTKRVRPQSPMPFSITSNSSTGEGEKEEGCNNG 55

Query: 52  ------------TNLSSSPAVSSAEEFFDSTEEDEDMANCLILLAQCQSTRESPPKPKPA 99
                        N++SSP  S+  +  DST+E+EDMANCLILLAQ QS RESP      
Sbjct: 56  DDDNNNMKNEDINNINSSPTSSAGLQ--DSTDEEEDMANCLILLAQGQS-RESPK----- 107

Query: 100 HYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPS 159
               H +E+           NS  K++SR+FLEA     G+ + G YVYECKTCNRT+PS
Sbjct: 108 ----HAEEDAGM--------NSA-KYSSRKFLEA--ATLGSSRAGYYVYECKTCNRTYPS 152

Query: 160 FQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKV 219
           FQALGGHRASHKKPKA++     + L    +++QQ  F               N N SKV
Sbjct: 153 FQALGGHRASHKKPKALMA----IGL----EKKQQHLF---------------NNNKSKV 189

Query: 220 HECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPMAVVEAGQDQPRKS 279
           HECSICGAEFTSGQALGGHMRRHR APV  T  A      TLS TP+A +E  +D PRK 
Sbjct: 190 HECSICGAEFTSGQALGGHMRRHR-APVGTTTPA------TLSFTPLA-LEPEEDHPRK- 240

Query: 280 SSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSSKQQQQQQQQQQPQQQQKSSLVFTA 339
                  + N+L+LDLDLNLPAPEDD +ESK  F+SKQQQ QQ QQ  QQQ ++SLVF  
Sbjct: 241 -------KRNVLNLDLDLNLPAPEDDHRESKFAFTSKQQQHQQPQQ--QQQPQTSLVF-P 290

Query: 340 AAALVDCHY 348
           A ALVDCHY
Sbjct: 291 APALVDCHY 299

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237697|ref|NP_196059.1| C2H2-type zinc finger protein [Arabidopsis thaliana] gi|28392998|gb|AAO41934.1| putative zinc finger transcription factor [Arabidopsis thaliana] gi|28827440|gb|AAO50564.1| putative zinc finger transcription factor [Arabidopsis thaliana] gi|332003354|gb|AED90737.1| C2H2-type zinc finger protein [Arabidopsis thaliana]

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 151/376 (40%), Positives = 195/376 (51%), Gaps = 79/376 (21%)

Query: 25  IVKGKRTKRQRPQSPVPFVVNGTIHDNTNLSSSPAVSSAEEFFD---------------- 68
           I+KGKRTKRQRPQSP+PF ++  I       S+P  +  EE+ D                
Sbjct: 14  ILKGKRTKRQRPQSPIPFSISPPI------VSTPENNMEEEYTDLDSKDNALGNDEGNHK 67

Query: 69  -------------------------STEEDEDMANCLILLAQCQSTRESPPKPKPAHYDI 103
                                      EED+D+ANCLILLAQ  S       P   H+  
Sbjct: 68  KDGVITSSSSSASWSSQNNHTLKAAEDEEDQDIANCLILLAQGHSL------PHNNHH-- 119

Query: 104 HEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQAL 163
                     + N+ NN+  +F SRRFLE   + +G GK G YVY+CKTC+RTFPSFQAL
Sbjct: 120 ----------LPNSNNNNTYRFTSRRFLETSSSNSG-GKAGYYVYQCKTCDRTFPSFQAL 168

Query: 164 GGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFL-----VSKSDDEEEDGNFRNGNSSK 218
           GGHRASHKKPKA     + L LK           +     V K+++      +   + +K
Sbjct: 169 GGHRASHKKPKAASFYSN-LDLKKNTYANDAVSLVHTTTTVFKNNNSRSLVVYGKASKNK 227

Query: 219 VHECSICGAEFTSGQALGGHMRRHRSAPVA------ATAAAMATTNTTLSLTPMAVVEAG 272
           VHEC ICGAEFTSGQALGGHMRRHR A V           A A  NT LSL+ M+  +  
Sbjct: 228 VHECGICGAEFTSGQALGGHMRRHRGAVVVPAVIAPTVTVATAAANTELSLSSMSFDQIS 287

Query: 273 QDQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSSKQQQQQQQQQQPQQQQK 332
                  +  +      ++SLDLDLNLPAPED+ + +   F+SKQ  +Q+ QQ+ Q+++ 
Sbjct: 288 DGHQDHLAMPAKKKARTVVSLDLDLNLPAPEDENRVNGFSFASKQNHEQEHQQKKQREEP 347

Query: 333 SSLVFTAAAALVDCHY 348
            SLV + A  LVDCHY
Sbjct: 348 KSLVLS-APTLVDCHY 362

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109860|ref|XP_002315335.1| predicted protein [Populus trichocarpa] gi|222864375|gb|EEF01506.1| predicted protein [Populus trichocarpa]

 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 162/335 (48%), Positives = 199/335 (59%), Gaps = 63/335 (18%)

Query: 24  NIVKGKRTKRQRPQSPV-PFVVNGTIHDNTNLSSSPAVSSAEEFFDSTEEDEDMANCLIL 82
           N+VKGKRTKR R QSP+ P+ +          +S    SS  EF DSTEE+EDMANCLIL
Sbjct: 10  NVVKGKRTKRLRVQSPIFPYGLTANSSSGDGGTSWSPTSSINEFQDSTEEEEDMANCLIL 69

Query: 83  LAQCQSTRESPPKPKPAHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGK 142
           LA+  S R+ P + +  H D   +   A             KFNSR+FLE   + TG+GK
Sbjct: 70  LAKGHS-RDFPTQQQHRHQDYDSRGGGADT----------TKFNSRKFLETVNS-TGSGK 117

Query: 143 GGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKS 202
            G YVYECKTCNRTFPSFQALGGHRASHKKPKA             H  ++++   +S S
Sbjct: 118 VGYYVYECKTCNRTFPSFQALGGHRASHKKPKAT------------HNDERKKN--LSPS 163

Query: 203 DDEEEDGNFR---------NGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA 253
            DEE DG+++         N N  K+HECS+CGAEFTSGQALGGHMRRHR   +++T   
Sbjct: 164 SDEELDGHYKNVSSLCTFSNHNKGKIHECSVCGAEFTSGQALGGHMRRHRGPLLSSTTTL 223

Query: 254 MATTNTTLSLTPMAVVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPF 313
             T     S           ++P+K+         N LSLDLDLNLPAP+D+    K  F
Sbjct: 224 SLTPLAIES-----------EEPKKA--------RNALSLDLDLNLPAPDDE----KFAF 260

Query: 314 SSKQQQQQQQQQQPQQQQKSSLVFTAAAALVDCHY 348
           +SKQQQ QQQQ   QQQQ + LVF+ + ALVDCHY
Sbjct: 261 ASKQQQHQQQQ---QQQQNTPLVFS-SPALVDCHY 291

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806415|ref|XP_002871091.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297316928|gb|EFH47350.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/375 (40%), Positives = 193/375 (51%), Gaps = 77/375 (20%)

Query: 25  IVKGKRTKRQRPQSPVPFVVNGTIHDNTNLSSSPAVSSAEEFFD---------------- 68
           I+KGKRTKRQRPQSP+PF ++  I       SSP  +  EEF D                
Sbjct: 14  ILKGKRTKRQRPQSPIPFSISPPI------VSSPERNMEEEFTDLDSKDNALGNHKKDGV 67

Query: 69  ---------------------STEEDEDMANCLILLAQCQSTRESPPKPKPAHYDIHEQE 107
                                  EED+D+ANCLILLAQ                  H   
Sbjct: 68  ITSSSSSASWSSHNNPILKAAEDEEDQDIANCLILLAQG-----------------HSLP 110

Query: 108 EIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHR 167
                  NNN NN+  +F SRRFLE   + +G GK G YVY+CKTC+RTFPSFQALGGHR
Sbjct: 111 NNNHHVTNNNSNNNAYRFTSRRFLETSSSNSG-GKAGYYVYQCKTCDRTFPSFQALGGHR 169

Query: 168 ASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGN--------FRNGNSSKV 219
           ASHKKPKA     + L LK           + + +     + N        +   +++KV
Sbjct: 170 ASHKKPKAASFYSN-LDLKKNIYANDAVSLVHTTTTVYNNNKNNNSRSLVVYGKASNNKV 228

Query: 220 HECSICGAEFTSGQALGGHMRRHRS------APVAATAAAMATTNTTLSLTPMAVVEAGQ 273
           HEC ICGAEFTSGQALGGHMRRHR       A       A A  NT LSL+ M+  +   
Sbjct: 229 HECGICGAEFTSGQALGGHMRRHRGAVVVPAAVAPTVTVATAAANTELSLSSMSFDQISD 288

Query: 274 DQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSSKQQQQQQQQQQPQQQQKS 333
            Q      +   +R  ++SLDLDLNLPAPED+ + +   F+SKQ  +Q+ QQ+ Q+++  
Sbjct: 289 GQDHLVMPAKKKARKTVVSLDLDLNLPAPEDENRVNGFSFASKQNHEQEHQQKKQREEPK 348

Query: 334 SLVFTAAAALVDCHY 348
           SLV + A  LVDCHY
Sbjct: 349 SLVLS-APTLVDCHY 362

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228303|ref|NP_187658.1| C2H2-type zinc finger protein [Arabidopsis thaliana] gi|12322800|gb|AAG51397.1|AC011560_29 hypothetical protein; 86933-85737 [Arabidopsis thaliana] gi|8567776|gb|AAF76348.1| hypothetical protein [Arabidopsis thaliana] gi|225898631|dbj|BAH30446.1| hypothetical protein [Arabidopsis thaliana] gi|332641390|gb|AEE74911.1| C2H2-type zinc finger protein [Arabidopsis thaliana]

 Score =  223 bits (568), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 161/391 (41%), Positives = 215/391 (54%), Gaps = 76/391 (19%)

Query: 25  IVKGKRTKRQRPQSPVPFVVNGTI--HDNTNLSSSPAVSSAEEFFD-------------- 68
           I+KGKRTKRQRPQSP+PF +   +  H+      S ++ S E+  +              
Sbjct: 17  ILKGKRTKRQRPQSPIPFSIIPPMSSHEPDAEEESTSLVSKEKSLNDEINNNNIKNNNNT 76

Query: 69  ------------------------STEEDEDMANCLILLAQCQSTRESPPKPKPAHYDIH 104
                                   + EED+DMANCLILLAQ  S     P+P P      
Sbjct: 77  LINGVTSSSSASSSSNNNATLKATADEEDQDMANCLILLAQGHSLPHLQPQPHPQ---QQ 133

Query: 105 EQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTG-----KGGCYVYECKTCNRTFPS 159
            ++ +   Q + N NN+  + +SRRFLE   +   T      + G YVY+CKTC+RTFPS
Sbjct: 134 TRQLMMSYQDSGNNNNNAYRSSSRRFLETSSSNGTTTNGGGGRAGYYVYQCKTCDRTFPS 193

Query: 160 FQALGGHRASHKKPK-AMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRN----- 213
           FQALGGHRASHKKPK AM ++ +    KS +            +     + N R+     
Sbjct: 194 FQALGGHRASHKKPKAAMGLHSNHDHKKSNYDDAVSLHLNNVLTTTPNNNSNHRSLVVYG 253

Query: 214 -GNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAM---------ATTNTTLSL 263
            G+++KVHEC ICGAEFTSGQALGGHMRRHR A VAA AA+          AT NT LSL
Sbjct: 254 KGSNNKVHECGICGAEFTSGQALGGHMRRHRGAVVAAAAASTATVSVAAIPATANTALSL 313

Query: 264 TPMA---VVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSSKQ--- 317
           +PM+   + E     P K       +R+ ++SLDLDLNLPAPED+ + + L F+SKQ   
Sbjct: 314 SPMSFDQMSEGPIQAPVK------RARSAVVSLDLDLNLPAPEDENRVNGLSFASKQEHE 367

Query: 318 QQQQQQQQQPQQQQKSSLVFTAAAALVDCHY 348
           Q+ +Q QQ+ Q++++ SLV ++A  LVDCHY
Sbjct: 368 QEHEQTQQKKQREEQKSLVLSSAPTLVDCHY 398

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533870|ref|XP_003535481.1| PREDICTED: zinc finger protein ZAT5-like [Glycine max]

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 180/378 (47%), Positives = 213/378 (56%), Gaps = 99/378 (26%)

Query: 3   EAQEEVLMINSNNKDQQSHNNNIVKGKRTKRQRPQSPVPFVVNGTIHDNTNLSSSPAVSS 62
           EA EE+    S +      + NI KGKRTKR RPQSP+PF +              A SS
Sbjct: 2   EAPEELSFGGSKD------HTNIAKGKRTKRVRPQSPIPFSIT-------------ANSS 42

Query: 63  AEEFFDSTEEDEDMANCLILLAQCQSTRESPPKPKPAHYDIHEQEEIAQLQINNNVNNSG 122
                +   E+EDMANCLILLAQ QS RESP          H +E+            S 
Sbjct: 43  TGGEKEEDYEEEDMANCLILLAQGQS-RESPK---------HAEEDAGM---------SY 83

Query: 123 MKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDR 182
            K NSR+FLEA     G+ + G YVYECKTCNRTFPSFQALGGHRASHKKPKA++     
Sbjct: 84  AKHNSRKFLEA--ATLGSSRAGYYVYECKTCNRTFPSFQALGGHRASHKKPKALMAIG-- 139

Query: 183 LSLKSQHQQQQQQQFLVSKSDDEE---------------EDGNF-----RNGNSSKVHEC 222
                   Q+++QQ L+S SD+EE                +GN       N N SKVHEC
Sbjct: 140 --------QKKKQQHLLS-SDEEEFQLKTNKSPFSIQLNTNGNLYSSSSNNNNKSKVHEC 190

Query: 223 SICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPMAVVEAGQDQPRKSSSS 282
           SICGAEFTSGQALGGHMRRHR APV  T  A     T LS TP+A +E  +D PRK    
Sbjct: 191 SICGAEFTSGQALGGHMRRHR-APVGTTPTA-----TILSFTPLA-LEPEEDHPRK---- 239

Query: 283 SSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSS------------KQQQQQQQQQQPQQQ 330
               + N+L+LDLDLNLPAPEDD +ESK  F+S            +Q    +Q+QQ  QQ
Sbjct: 240 ----KRNVLNLDLDLNLPAPEDDHRESKFAFASKQQQQQHGQKQPQQHHHPEQKQQQPQQ 295

Query: 331 QKSSLVFTAAAALVDCHY 348
           Q++SLVF    ALVDCHY
Sbjct: 296 QQTSLVF-PVPALVDCHY 312

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829584|ref|XP_002882674.1| hypothetical protein ARALYDRAFT_478379 [Arabidopsis lyrata subsp. lyrata] gi|297328514|gb|EFH58933.1| hypothetical protein ARALYDRAFT_478379 [Arabidopsis lyrata subsp. lyrata]

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 164/397 (41%), Positives = 214/397 (53%), Gaps = 89/397 (22%)

Query: 25  IVKGKRTKRQRPQSPVPFVV--------------------------------------NG 46
           I+KGKRTKRQRPQSP+PF +                                      N 
Sbjct: 17  ILKGKRTKRQRPQSPIPFSIIPPLSSHEPDAEEESTSLISKEKSLNDEINNNNNKNDNNT 76

Query: 47  TIHDNTNLSSSPAVSSAEEFFDST--EEDEDMANCLILLAQCQSTRESPPKPKPAHYDIH 104
            I+D T+ SS+ + S+      +T  EED+DMANCLILLAQ  S     P+P        
Sbjct: 77  LINDVTSSSSASSSSNKNATLKATADEEDQDMANCLILLAQGHSLPHHQPQPH------- 129

Query: 105 EQEEIAQLQIN---NNVNNSGMKFNSRRFLEAPGT-----GTGTGKGGCYVYECKTCNRT 156
            Q++  QL I+   +  NN+  + +SRRFLE P +       G GK G YVY+CKTC+RT
Sbjct: 130 PQQQTRQLMISYQESGNNNNAYRSSSRRFLETPSSNGTTTNGGGGKAGYYVYQCKTCDRT 189

Query: 157 FPSFQALGGHRASHKKPKAML-----------MNDDRLSLKSQHQQQQQQQFLVSKSDDE 205
           FPSFQALGGHRASHKKPKA             + DD +SL              + +++ 
Sbjct: 190 FPSFQALGGHRASHKKPKAATGLHSNHDHKKSIYDDAVSL------HLNNVITTTPNNNS 243

Query: 206 EEDGNFRNGNSS--KVHECSICGAEFTSGQALGGHMRRHRS---------APVAATAAAM 254
                   G +S  KVHEC ICGAEFTSGQALGGHMRRHR              A AA  
Sbjct: 244 NHRSLVAYGKASNNKVHECGICGAEFTSGQALGGHMRRHRGAVVAAAAASTATVAVAATQ 303

Query: 255 ATTNTTLSLTPMAVVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPFS 314
           AT NT LSL+PM+  +   D P +  +    +R+ ++SLDLDLNLPAPED+ + + L F+
Sbjct: 304 ATANTALSLSPMSFDQMS-DGPVQ--APVKRARSAVVSLDLDLNLPAPEDENRVNGLSFA 360

Query: 315 SKQ---QQQQQQQQQPQQQQKSSLVFTAAAALVDCHY 348
           SKQ   Q+ +Q QQ+ Q++++ SLV ++   LVDCHY
Sbjct: 361 SKQEHEQEHEQTQQKKQREEQKSLVLSSPPTLVDCHY 397

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449507|ref|XP_004142506.1| PREDICTED: zinc finger protein ZAT5-like [Cucumis sativus]

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 139/334 (41%), Positives = 171/334 (51%), Gaps = 79/334 (23%)

Query: 25  IVKGKRTKRQRPQSPVPFVV-----NGTI-----------------------HDNTNLSS 56
           I KGKRTKRQR  SP+PF V     +G +                       H  +N + 
Sbjct: 23  IAKGKRTKRQRLHSPIPFAVPTNSSSGDLGGVVVVVADHDDHHSDFVPQNNDHYQSNTNF 82

Query: 57  SPAVSSAEE----------FFDSTEEDEDMANCLILLAQCQSTRESPPKPKPAHYDIHEQ 106
           SP+ SSA +             +TEE+EDMANCLILLAQ           +P    + +Q
Sbjct: 83  SPSSSSAHDDQLVQQFNNNTSTTTEEEEDMANCLILLAQ----------GRPPCSPLTKQ 132

Query: 107 EEIAQL-QINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGG 165
            +      + NNV         RRF  A     G G  GCY YECKTC RTFPSFQALGG
Sbjct: 133 LDTGPFHHVTNNV---------RRF-SAENVEKGGGV-GCYAYECKTCYRTFPSFQALGG 181

Query: 166 HRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLV---SKSDDEEEDGNFRNGNSSKVHEC 222
           HRASHKKPKAM      +      + Q +   +    S S    + G+  +   +KVHEC
Sbjct: 182 HRASHKKPKAMEAEKKHILSSDDEEIQFKNNNITTTHSLSLQLNQRGSLNSSGKAKVHEC 241

Query: 223 SICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTPMAVVEAGQDQPRKSSSS 282
           +ICGAEFTSGQALGGHMRRHR+ PV         TNT LSLTPM +    Q QP++  S 
Sbjct: 242 AICGAEFTSGQALGGHMRRHRAMPVG--------TNTALSLTPMNMETEDQRQPKRQRS- 292

Query: 283 SSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSSK 316
                  +LSLDLDLNLPAP++  + S+  F  K
Sbjct: 293 -------VLSLDLDLNLPAPQEHDQRSESKFLMK 319

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1786136|dbj|BAA19111.1| PEThy;ZPT2-6 [Petunia x hybrida]

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 147/391 (37%), Positives = 197/391 (50%), Gaps = 96/391 (24%)

Query: 3   EAQEEVLMINSNNKDQQSHNNNIVKGKRTKRQRPQSPVPFVVNGTIHDNTN--------- 53
           EA EEV+ +   NKD      +IVKGKRTKR R QSP+PF V  T HD++N         
Sbjct: 2   EALEEVVGVP--NKDHF----HIVKGKRTKRLRLQSPIPFTVAAT-HDSSNACDYHKNDT 54

Query: 54  -----------------LSSSPAVSSAEEFFDS-TEEDEDMANCLILLAQCQS------- 88
                             +S  +  SAE F ++ TE++E+ A  LIL+++C         
Sbjct: 55  DNGEDVPHNNNNNNSDNNASPSSAPSAEMFINTFTEDEEETARYLILMSKCDDHLHPRNK 114

Query: 89  TRESPPKPKPAHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTG-KGGCYV 147
           +R+  P   P  +++           N+++     KFNS+R++E   T  G G K G +V
Sbjct: 115 SRDGLP---PDKFEL----------FNDDLKLYQSKFNSKRYIET-STNLGNGTKAGIFV 160

Query: 148 YECKTCNRTFPSFQALGGHRASHKKPKAM---LMNDDRLSLK-SQHQQQQQQQFLVSKSD 203
           YECKTCNRTFPSFQALGGHRASHKKPK +   L+N+ +L    S    Q      + K++
Sbjct: 161 YECKTCNRTFPSFQALGGHRASHKKPKTLTTELVNNKKLYFDFSDEDDQPSPSTTLCKTN 220

Query: 204 DEEEDGNFRNGNSS------KVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATT 257
              +D N    NSS      ++HECS CGAEFTSGQALGGHMRRHR              
Sbjct: 221 ---KDVNRILPNSSNKYTSPRIHECSYCGAEFTSGQALGGHMRRHRGG---------VNV 268

Query: 258 NTTLSLTPMAVVEAGQDQPRKSSSSSSSSRNNLLSLDLDLNLPAPEDDPKESKLPFSSKQ 317
           N++L L+         DQ   +++     R+    L LDLNLP   DD  + K P  S +
Sbjct: 269 NSSLHLSNYVSPATSIDQEFANNTMKKVPRD---GLSLDLNLPV-SDDNLDPKYPVVSLK 324

Query: 318 QQQQQQQQQPQQQQKSSLVFTAAAALVDCHY 348
           QQ Q++ Q+ Q              LVDCHY
Sbjct: 325 QQDQEKTQRQQ--------------LVDCHY 341

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	348
TAIR|locus:2179924	362	AT5G04390 "AT5G04390" [Arabido	0.359	0.345	0.537	1.7e-47
TAIR|locus:2075865	398	AT3G10470 "AT3G10470" [Arabido	0.646	0.565	0.380	3.6e-40
TAIR|locus:2046153	286	AT2G28200 "AT2G28200" [Arabido	0.433	0.527	0.438	1.1e-36
TAIR|locus:2142674	292	AT5G03510 "AT5G03510" [Arabido	0.278	0.332	0.494	1.6e-29
TAIR|locus:2054548	156	AT2G28710 "AT2G28710" [Arabido	0.086	0.192	0.7	1.9e-21
TAIR|locus:2084046	175	AT3G53600 "AT3G53600" [Arabido	0.086	0.171	0.8	1.5e-18
TAIR|locus:2168073	162	RHL41 "AT5G59820" [Arabidopsis	0.094	0.203	0.657	4e-17
TAIR|locus:2205583	324	AT1G02040 "AT1G02040" [Arabido	0.270	0.290	0.415	7e-17
TAIR|locus:2158192	245	ZF1 "AT5G67450" [Arabidopsis t	0.258	0.367	0.389	1.3e-16
TAIR|locus:2075291	168	ZAT7 "AT3G46090" [Arabidopsis	0.100	0.208	0.641	5.2e-16

TAIR|locus:2179924 AT5G04390 "AT5G04390" [Arabidopsis thaliana (taxid:3702)]

 Score = 321 (118.1 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
 Identities = 72/134 (53%), Positives = 83/134 (61%)

Query:   116 NNVNNSGMKFNSRRFLEAPXXXXXXXXXXCYVYECKTCNRTFPSFQALGGHRASHKKPKA 175
             N+ NN+  +F SRRFLE             YVY+CKTC+RTFPSFQALGGHRASHKKPKA
Sbjct:   122 NSNNNNTYRFTSRRFLETSSSNSGGKAGY-YVYQCKTCDRTFPSFQALGGHRASHKKPKA 180

Query:   176 MLMNDDRLSLKSXXXXXXXXXFLVSKSDDEEEDGNFRN----GNSSK--VHECSICGAEF 229
                  + L LK           LV  +    ++ N R+    G +SK  VHEC ICGAEF
Sbjct:   181 ASFYSN-LDLKKNTYANDAVS-LVHTTTTVFKNNNSRSLVVYGKASKNKVHECGICGAEF 238

Query:   230 TSGQALGGHMRRHR 243
             TSGQALGGHMRRHR
Sbjct:   239 TSGQALGGHMRRHR 252

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2075865 AT3G10470 "AT3G10470" [Arabidopsis thaliana (taxid:3702)]

 Score = 367 (134.2 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
 Identities = 97/255 (38%), Positives = 127/255 (49%)

Query:     3 EAQEEVLMINSNNK--DQQSHNNNIVKGKRTKRQRPQSPVPFVVNGTIHDNTNLSSSPAV 60
             +A+EE   + S  K  + + +NNNI     T           ++NG    ++  SSS   
Sbjct:    46 DAEEESTSLVSKEKSLNDEINNNNIKNNNNT-----------LINGVTSSSSASSSSN-- 92

Query:    61 XXXXXXXXXXXXXXXMANCLILLAQCQSTRESPPKPKPAHYDIHEQEEIAQLQINNNVNN 120
                            MANCLILLAQ  S     P+P P       ++ +   Q + N NN
Sbjct:    93 NNATLKATADEEDQDMANCLILLAQGHSLPHLQPQPHPQQ---QTRQLMMSYQDSGNNNN 149

Query:   121 SGMKFNSRRFLEAPXXXXXXXX-----XXCYVYECKTCNRTFPSFQALGGHRASHKKPKA 175
             +  + +SRRFLE                  YVY+CKTC+RTFPSFQALGGHRASHKKPKA
Sbjct:   150 NAYRSSSRRFLETSSSNGTTTNGGGGRAGYYVYQCKTCDRTFPSFQALGGHRASHKKPKA 209

Query:   176 ML-MNDDRLSLKSXXXXXXXXXFLVSKSDDEEEDGNFRN------GNSSKVHECSICGAE 228
              + ++ +    KS              +     + N R+      G+++KVHEC ICGAE
Sbjct:   210 AMGLHSNHDHKKSNYDDAVSLHLNNVLTTTPNNNSNHRSLVVYGKGSNNKVHECGICGAE 269

Query:   229 FTSGQALGGHMRRHR 243
             FTSGQALGGHMRRHR
Sbjct:   270 FTSGQALGGHMRRHR 284

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009555 "pollen development" evidence=IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2046153 AT2G28200 "AT2G28200" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
 Identities = 75/171 (43%), Positives = 84/171 (49%)

Query:   146 YVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSL----KSXXXXXXXXXFLVSK 201
             YVYECKTCNRTF SFQALGGHRASHKKP+       RL L     S         F VS 
Sbjct:   113 YVYECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSG 172

Query:   202 SDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRXXXXXXXXXXXXXXXXXX 261
             S    +  N  N  ++KVHECSICG+EFTSGQALGGHMRRHR                  
Sbjct:   173 SALASQASNIIN-KANKVHECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRN 231

Query:   262 XXXXXXVVEAGQ--DQPRKXXXXXXXXXXXXXXXXXXXXXPAPEDDPKESK 310
                    +  G+  +Q RK                     PAPEDD +ESK
Sbjct:   232 STEEEIEINIGRSMEQQRKYLPLDLNL-------------PAPEDDLRESK 269

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2142674 AT5G03510 "AT5G03510" [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
 Identities = 49/99 (49%), Positives = 58/99 (58%)

Query:   147 VYECKTCNRTFPSFQALGGHRASHKKPK--AMLMNDDRLSLKSXXXXXXXXXFLVSKSDD 204
             VY+CKTC+++F SFQALGGHRASHKKPK  A +         S           V     
Sbjct:   117 VYQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTASASTVETVEAGAVGSFLS 176

Query:   205 EEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHR 243
              +   +  +    K HECSIC AEF+SGQALGGHMRRHR
Sbjct:   177 LQVTSSDGSKKPEKTHECSICKAEFSSGQALGGHMRRHR 215

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2054548 AT2G28710 "AT2G28710" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
 Identities = 21/30 (70%), Positives = 26/30 (86%)

Query:   147 VYECKTCNRTFPSFQALGGHRASHKKPKAM 176
             V+ CKTCN+ FPSFQALGGHRASH++  A+
Sbjct:    33 VFACKTCNKEFPSFQALGGHRASHRRSAAL 62

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2084046 AT3G53600 "AT3G53600" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
 Identities = 24/30 (80%), Positives = 27/30 (90%)

Query:   148 YECKTCNRTFPSFQALGGHRASHKKPKAML 177
             +ECKTCNR F SFQALGGHRASHKKPK ++
Sbjct:    49 FECKTCNRKFDSFQALGGHRASHKKPKLIV 78

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2168073 RHL41 "AT5G59820" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
 Identities = 25/38 (65%), Positives = 28/38 (73%)

Query:   147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLS 184
             V+ CKTC + F SFQALGGHRASHKKP     N+D LS
Sbjct:    38 VFTCKTCLKQFHSFQALGGHRASHKKP-----NNDALS 70

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0009631 "cold acclimation" evidence=IMP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0006979 "response to oxidative stress" evidence=IEP;RCA;IMP

GO:0009408 "response to heat" evidence=IEP;IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0009611 "response to wounding" evidence=IEP;RCA;IMP

GO:0042538 "hyperosmotic salinity response" evidence=IEP;RCA;IMP

GO:0010224 "response to UV-B" evidence=IEP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2205583 AT1G02040 "AT1G02040" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
 Identities = 42/101 (41%), Positives = 54/101 (53%)

Query:   147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSXXXXXXXXXFLVSKSDDEE 206
             V++CK C + F S QALGGHRASHKK K    + D+   +              + +DEE
Sbjct:   149 VFQCKACKKVFTSHQALGGHRASHKKVKGCFASQDKEEEEEEEYKEDDDDN--DEDEDEE 206

Query:   207 EDGNFRNG-----NSSKVHECSICGAEFTSGQALGGHMRRH 242
             ED   ++        S  HEC+IC   F+SGQALGGH R H
Sbjct:   207 EDEEDKSTAHIARKRSNAHECTICHRVFSSGQALGGHKRCH 247

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2158192 ZF1 "AT5G67450" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
 Identities = 37/95 (38%), Positives = 51/95 (53%)

Query:   148 YECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSXXXXXXXXXFLVSKSDDEEE 207
             Y+C  C ++F S+QALGGH+ SH+KP    +      L S          +++ + +   
Sbjct:    97 YKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQEL-SNNSHSNSGSVVINVTVNT-- 153

Query:   208 DGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRH 242
              GN  +  S K+H CSIC   F SGQALGGH R H
Sbjct:   154 -GNGVS-QSGKIHTCSICFKSFASGQALGGHKRCH 186

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2075291 ZAT7 "AT3G46090" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
 Identities = 25/39 (64%), Positives = 28/39 (71%)

Query:   147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSL 185
             V+ CKTC + F SFQALGGHRASHKK    L+N D  SL
Sbjct:    39 VFRCKTCLKEFSSFQALGGHRASHKK----LINSDNPSL 73

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0045926 "negative regulation of growth" evidence=IGI

GO:0010200 "response to chitin" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	348
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-07
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	3e-07

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 15/27 (55%), Positives = 18/27 (66%)

Query: 219 VHECSICGAEFTSGQALGGHMRRHRSA 245
           VH C +CG  F+S QALGGH + H S 
Sbjct: 1   VHTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 45.7 bits (109), Expect = 3e-07
 Identities = 14/27 (51%), Positives = 17/27 (62%)

Query: 147 VYECKTCNRTFPSFQALGGHRASHKKP 173
           V+ C  C +TF S QALGGH+ SH   
Sbjct: 1   VHTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	348
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.9
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.82
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.57
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.53
KOG3576	267	consensus Ovo and related transcription factors [T	99.48
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.42
KOG3576	267	consensus Ovo and related transcription factors [T	99.39
KOG3608	467	consensus Zn finger proteins [General function pre	99.37
KOG3608	467	consensus Zn finger proteins [General function pre	99.31
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.2
PHA00733	128	hypothetical protein	98.74
PLN03086	567	PRLI-interacting factor K; Provisional	98.65
PHA02768	55	hypothetical protein; Provisional	98.57
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.56
PHA02768	55	hypothetical protein; Provisional	98.53
PLN03086	567	PRLI-interacting factor K; Provisional	98.51
PHA00733	128	hypothetical protein	98.42
PHA00616	44	hypothetical protein	98.07
PHA00616	44	hypothetical protein	97.96
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.89
KOG3993	500	consensus Transcription factor (contains Zn finger	97.85
KOG3993	500	consensus Transcription factor (contains Zn finger	97.84
PHA00732	79	hypothetical protein	97.83
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.79
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.56
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.43
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.38
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.35
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.28
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.17
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.04
PHA00732	79	hypothetical protein	96.97
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.93
smart00355	26	ZnF_C2H2 zinc finger.	96.81
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.79
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.75
smart00355	26	ZnF_C2H2 zinc finger.	96.3
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.04
COG5048	467	FOG: Zn-finger [General function prediction only]	95.95
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.34
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.14
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.07
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.53
KOG1146	1406	consensus Homeobox protein [General function predi	94.44
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.3
PRK04860	160	hypothetical protein; Provisional	94.12
KOG1146	1406	consensus Homeobox protein [General function predi	92.97
PRK04860	160	hypothetical protein; Provisional	92.67
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.2
KOG2893	341	consensus Zn finger protein [General function pred	91.99
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	91.51
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.24
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.31
COG5048	467	FOG: Zn-finger [General function prediction only]	89.67
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	89.02
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	88.74
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	87.4
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	86.14
KOG1280	381	consensus Uncharacterized conserved protein contai	83.61

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.90  E-value=2.2e-24  Score=192.51  Aligned_cols=129  Identities=18%  Similarity=0.242  Sum_probs=111.8

Q ss_pred             cccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCC
Q 045639          108 EIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSL  185 (348)
Q Consensus       108 ~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~  185 (348)
                      ..|+|+.      ||+.|...++|-+|...|.-. ...+.+.|++|||.|.+..+|+.|+++|+  -++.|  |||.|.+
T Consensus       129 ~r~~c~e------Cgk~ysT~snLsrHkQ~H~~~-~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSR  199 (279)
T KOG2462|consen  129 PRYKCPE------CGKSYSTSSNLSRHKQTHRSL-DSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSR  199 (279)
T ss_pred             Cceeccc------cccccccccccchhhcccccc-cccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccc
Confidence            3566766      899999999996664444322 23788999999999999999999999998  46677  9999998


Q ss_pred             hHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccccccccCCCCCC
Q 045639          186 KSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSL  263 (348)
Q Consensus       186 ~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~~~~~~  263 (348)
                      .+-                  |+.|+|+|||||||.|..|+|+|..+++|+.||++|.+.|.|.|..|+++|....-|
T Consensus       200 PWL------------------LQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyL  259 (279)
T KOG2462|consen  200 PWL------------------LQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYL  259 (279)
T ss_pred             hHH------------------hhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHH
Confidence            876                  778889999999999999999999999999999999999999999999999866555

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.82  E-value=1.6e-21  Score=174.33  Aligned_cols=111  Identities=21%  Similarity=0.327  Sum_probs=96.0

Q ss_pred             cccccc---CccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccc
Q 045639          100 HYDIHE---QEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAM  176 (348)
Q Consensus       100 h~~~h~---~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~  176 (348)
                      |+.+|.   ..+.+.|..      |+|.|.+-..|..|    +++|+  -+++|.+|||.|.+..-|.+|+|+|+|||||
T Consensus       149 HkQ~H~~~~s~ka~~C~~------C~K~YvSmpALkMH----irTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF  216 (279)
T KOG2462|consen  149 HKQTHRSLDSKKAFSCKY------CGKVYVSMPALKMH----IRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPF  216 (279)
T ss_pred             hhcccccccccccccCCC------CCceeeehHHHhhH----hhccC--CCcccccccccccchHHhhcccccccCCCCc
Confidence            666663   245567776      88999998888554    44555  6999999999999999999999999999999


Q ss_pred             cC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhh
Q 045639          177 LM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMR  240 (348)
Q Consensus       177 ~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r  240 (348)
                      .|  |++.|..+++                  |+.||++|.+.|+|+|..|+|.|...+.|.+|..
T Consensus       217 ~C~hC~kAFADRSN------------------LRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  217 SCPHCGKAFADRSN------------------LRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             cCCcccchhcchHH------------------HHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            99  9999999998                  6667799999999999999999999999999964

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.57  E-value=7.8e-16  Score=154.57  Aligned_cols=64  Identities=22%  Similarity=0.395  Sum_probs=51.9

Q ss_pred             CCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCC----CCccc---ccccccCCCCCC
Q 045639          200 SKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAP----VAATA---AAMATTNTTLSL  263 (348)
Q Consensus       200 ~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~----~~~~~---~~~~~~~~~~~~  263 (348)
                      .+.-.+.|+.|.|+|+|||||+|.|||+.|+++.+|+.||-+|....    .+.|+   +|..-|.....+
T Consensus       614 VlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  614 VLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             cccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            34455679999999999999999999999999999999999997654    35666   666666655544

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.53  E-value=6.2e-15  Score=148.19  Aligned_cols=66  Identities=23%  Similarity=0.351  Sum_probs=59.3

Q ss_pred             ccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccC---CCCCccCCchhHhhhhhhcC
Q 045639          100 HYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECK---TCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       100 h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~---~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      |.|+|+||+||+|.+      ||+.|..+.+|+.|+..|...+.-.-.|.|+   +|-+.|...-.|..|+++|.
T Consensus       624 HyrtHtGERPFkCKi------CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~  692 (958)
T KOG1074|consen  624 HYRTHTGERPFKCKI------CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRIHL  692 (958)
T ss_pred             hhhcccCcCcccccc------ccchhccccchhhcccccccCccccccccCCchhhhcccccccccccceEEeec
Confidence            889999999999998      8899999999999888887777777789999   89999999999999999997

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.48  E-value=5e-15  Score=126.70  Aligned_cols=97  Identities=20%  Similarity=0.318  Sum_probs=83.0

Q ss_pred             CCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCcee
Q 045639          144 GCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHE  221 (348)
Q Consensus       144 g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~  221 (348)
                      +...|.|.+|+|.|.-..-|.+|++-|...|.+.|  ||+.|.....                  |++|+|+|+|.+||+
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfd------------------lkrh~rthtgvrpyk  175 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFD------------------LKRHTRTHTGVRPYK  175 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhh------------------hhhhhccccCccccc
Confidence            45679999999999999999999999998888777  9999888776                  777889999999999


Q ss_pred             ccccCcccCChhHHHhHhh-hcC----------CCCCCcccccccccC
Q 045639          222 CSICGAEFTSGQALGGHMR-RHR----------SAPVAATAAAMATTN  258 (348)
Q Consensus       222 C~~Cgk~F~~~~~L~~H~r-~H~----------~~~~~~~~~~~~~~~  258 (348)
                      |+.|+|+|+++-.|..|.+ +|.          .+|.|.|..|+-+..
T Consensus       176 c~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~  223 (267)
T KOG3576|consen  176 CSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSE  223 (267)
T ss_pred             hhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCC
Confidence            9999999999999999976 442          356788998876543

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.42  E-value=2.5e-14  Score=141.70  Aligned_cols=81  Identities=20%  Similarity=0.377  Sum_probs=75.1

Q ss_pred             CCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCc
Q 045639          142 KGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKV  219 (348)
Q Consensus       142 h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp  219 (348)
                      .+.+.+|.|+.|+|.|...+.|.+|.--|+|.+||.|  |.|.|.++-+                  |..|+|.|.||||
T Consensus       889 kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHH------------------LtEHkRLHSGEKP  950 (1007)
T KOG3623|consen  889 KTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHH------------------LTEHKRLHSGEKP  950 (1007)
T ss_pred             cCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhh------------------hhhhhhhccCCCc
Confidence            3456789999999999999999999999999999999  9999999887                  6677799999999


Q ss_pred             eeccccCcccCChhHHHhHhh
Q 045639          220 HECSICGAEFTSGQALGGHMR  240 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r  240 (348)
                      |.|+.|+|+|+....+..||.
T Consensus       951 fQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  951 FQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             chhhhhhhhcccccchHhhhc
Confidence            999999999999999999996

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.39  E-value=4e-14  Score=121.21  Aligned_cols=117  Identities=15%  Similarity=0.219  Sum_probs=97.7

Q ss_pred             ccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCC
Q 045639          107 EEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLS  184 (348)
Q Consensus       107 e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~  184 (348)
                      ...|-|.+      |+|.|.-++.|    .+|++-|...+.|-|..|||.|..--+|++|.|+|+|.+||+|  |++.|.
T Consensus       115 ~d~ftCrv------CgK~F~lQRml----nrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaft  184 (267)
T KOG3576|consen  115 QDSFTCRV------CGKKFGLQRML----NRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFT  184 (267)
T ss_pred             CCeeeeeh------hhhhhhHHHHH----HHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHH
Confidence            44567776      89999998888    4566688888999999999999999999999999999999999  999999


Q ss_pred             ChHHHHhhhcccccCCCCCchhhccccccC------CCCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          185 LKSQHQQQQQQQFLVSKSDDEEEDGNFRNG------NSSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       185 ~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H------~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +...|..|.+             +.|-..|      ..+|.|.|..||..-.....+..|.+.|+...
T Consensus       185 qrcsleshl~-------------kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  185 QRCSLESHLK-------------KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             hhccHHHHHH-------------HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            9999888864             1111111      24688999999999999999999999988654

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.37  E-value=6.8e-14  Score=128.66  Aligned_cols=120  Identities=13%  Similarity=0.141  Sum_probs=72.3

Q ss_pred             CCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhc--CCCccccC--CCccCCChHHHHhhhc-
Q 045639          120 NSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASH--KKPKAMLM--NDDRLSLKSQHQQQQQ-  194 (348)
Q Consensus       120 ~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H--~~~k~~~c--C~~~f~~~~~L~~H~~-  194 (348)
                      +|-+.|-++..|    +.|++.|++||...|..||.-|.++..|-.|.+.-  ....+|.|  |.|.|....-|..|+. 
T Consensus       184 ~Ct~~~~~k~~L----reH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~r  259 (467)
T KOG3608|consen  184 MCTKHMGNKYRL----REHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVR  259 (467)
T ss_pred             hhhhhhccHHHH----HHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHH
Confidence            355566666666    45555667777777777777777776676665532  23345666  6666666666665554 


Q ss_pred             ---ccccC----CCCCchhhcccccc-CCCCCceeccccCcccCChhHHHhHhhhcC
Q 045639          195 ---QQFLV----SKSDDEEEDGNFRN-GNSSKVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       195 ---~~~C~----~f~~~~~L~~H~~~-H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                         .|+|.    .....+.|.+|++. |...|||+|+.|.+.|.+.+.|.+|..+|.
T Consensus       260 Hvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  260 HVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             hhhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence               45554    44555556666553 555666666666666666666666655443

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.31  E-value=1.6e-13  Score=126.16  Aligned_cols=156  Identities=14%  Similarity=0.128  Sum_probs=123.7

Q ss_pred             ccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCC
Q 045639          100 HYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMN  179 (348)
Q Consensus       100 h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC  179 (348)
                      |.++|++||..+|..      ||.-|..+..|-.|.++.  .-....+|.|..|.|.|.+...|..|++.|..-..+.-|
T Consensus       198 H~r~Hs~eKvvACp~------Cg~~F~~~tkl~DH~rRq--t~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplC  269 (467)
T KOG3608|consen  198 HIRTHSNEKVVACPH------CGELFRTKTKLFDHLRRQ--TELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLC  269 (467)
T ss_pred             HHHhcCCCeEEecch------HHHHhccccHHHHHHHhh--hhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhccccccc
Confidence            889999999999998      778898887775554421  112345899999999999999999999988765444448


Q ss_pred             CccCCChHHHHhhhc-------ccccC----CCCCchhhccccccCCCCCceeccc--cCcccCChhHHHhHhhhcC-CC
Q 045639          180 DDRLSLKSQHQQQQQ-------QQFLV----SKSDDEEEDGNFRNGNSSKVHECSI--CGAEFTSGQALGGHMRRHR-SA  245 (348)
Q Consensus       180 ~~~f~~~~~L~~H~~-------~~~C~----~f~~~~~L~~H~~~H~~ekp~~C~~--Cgk~F~~~~~L~~H~r~H~-~~  245 (348)
                      +.+....+.|..|++       ||+|.    .+...+.|.+|..+|. +-.|.|..  |..+|.+...|++|++.+. |.
T Consensus       270 dmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~  348 (467)
T KOG3608|consen  270 DMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGN  348 (467)
T ss_pred             ccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCC
Confidence            888888888988886       88886    6777888999998888 67799987  9999999999999988654 43


Q ss_pred             --CCCcccccccccCCCCCCC
Q 045639          246 --PVAATAAAMATTNTTLSLT  264 (348)
Q Consensus       246 --~~~~~~~~~~~~~~~~~~~  264 (348)
                        .+|.|-.|...+.+..+|+
T Consensus       349 np~~Y~CH~Cdr~ft~G~~L~  369 (467)
T KOG3608|consen  349 NPILYACHCCDRFFTSGKSLS  369 (467)
T ss_pred             CCCceeeecchhhhccchhHH
Confidence              4688888888888776664

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.20  E-value=1.6e-12  Score=129.09  Aligned_cols=80  Identities=18%  Similarity=0.265  Sum_probs=72.4

Q ss_pred             cCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCcc
Q 045639          105 EQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDR  182 (348)
Q Consensus       105 ~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~  182 (348)
                      +.+-.|.|+.      |.|.|...+.|    .+|.--|+|.+||+|.+|.|+|..+..|..|+|.|.|+|||.|  |+|.
T Consensus       890 te~gmyaCDq------CDK~FqKqSSL----aRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKR  959 (1007)
T KOG3623|consen  890 TEDGMYACDQ------CDKAFQKQSSL----ARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKR  959 (1007)
T ss_pred             CccccchHHH------HHHHHHhhHHH----HHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhh
Confidence            4456899999      66999999998    5677789999999999999999999999999999999999999  9999


Q ss_pred             CCChHHHHhhhc
Q 045639          183 LSLKSQHQQQQQ  194 (348)
Q Consensus       183 f~~~~~L~~H~~  194 (348)
                      |.+...+.+||.
T Consensus       960 FSHSGSYSQHMN  971 (1007)
T KOG3623|consen  960 FSHSGSYSQHMN  971 (1007)
T ss_pred             cccccchHhhhc
Confidence            999998877773

>PHA00733 hypothetical protein

Probab=98.74  E-value=5.3e-09  Score=86.01  Aligned_cols=80  Identities=15%  Similarity=0.137  Sum_probs=59.5

Q ss_pred             CcccccCCCCCccCCchhHhhh--hh---hcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCC
Q 045639          145 CYVYECKTCNRTFPSFQALGGH--RA---SHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSS  217 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H--~~---~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~e  217 (348)
                      .+++.|.+|.+.|.....|..|  ++   .+.+.++|.|  |++.|.....|..|                  ++.|  +
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H------------------~r~h--~   97 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQH------------------IRYT--E   97 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHH------------------HhcC--C
Confidence            4678888888888877777666  21   2345677877  88888888775544                  3444  3


Q ss_pred             CceeccccCcccCChhHHHhHhhhcCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      ++|.|.+|++.|.....|..|++..++
T Consensus        98 ~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         98 HSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            579999999999999999999887654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.65  E-value=3.8e-08  Score=98.61  Aligned_cols=93  Identities=13%  Similarity=0.174  Sum_probs=73.6

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCCCccccC-CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceecc
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM-NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECS  223 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c-C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~  223 (348)
                      ++.+.|..|++.|. ...|..|+.+|+  +++.| |++.+ .+..                  |..|+++|..+|++.|.
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~CpCg~~~-~R~~------------------L~~H~~thCp~Kpi~C~  508 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCPCGVVL-EKEQ------------------MVQHQASTCPLRLITCR  508 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCCCCCCc-chhH------------------HHhhhhccCCCCceeCC
Confidence            34468999999996 688999999986  56667 88654 3344                  67778899999999999


Q ss_pred             ccCcccCC----------hhHHHhHhhhcCCCCCCcccccccccCCC
Q 045639          224 ICGAEFTS----------GQALGGHMRRHRSAPVAATAAAMATTNTT  260 (348)
Q Consensus       224 ~Cgk~F~~----------~~~L~~H~r~H~~~~~~~~~~~~~~~~~~  260 (348)
                      .|++.|..          ...|..|+..+ |.+++.|..|+..+...
T Consensus       509 fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        509 FCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             CCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh
Confidence            99999953          34799999886 88899999998765543

>PHA02768 hypothetical protein; Provisional

Probab=98.57  E-value=2.3e-08  Score=68.74  Aligned_cols=42  Identities=14%  Similarity=0.243  Sum_probs=36.3

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHH
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQ  190 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~  190 (348)
                      -|+|++|||.|...++|..|+++|+  ++++|  |++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            5899999999999999999999999  56777  999988776643

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.56  E-value=8.6e-09  Score=60.48  Aligned_cols=25  Identities=24%  Similarity=0.567  Sum_probs=23.1

Q ss_pred             hccccccCCCCCceeccccCcccCC
Q 045639          207 EDGNFRNGNSSKVHECSICGAEFTS  231 (348)
Q Consensus       207 L~~H~~~H~~ekp~~C~~Cgk~F~~  231 (348)
                      |.+|+++|+|+|||.|++|++.|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            7889999999999999999999974

...

>PHA02768 hypothetical protein; Provisional

Probab=98.53  E-value=4.7e-08  Score=67.20  Aligned_cols=44  Identities=20%  Similarity=0.342  Sum_probs=37.8

Q ss_pred             ceeccccCcccCChhHHHhHhhhcCCCCCCcccccccccCCCCCCC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLT  264 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~~~~~~~  264 (348)
                      -|+|++||+.|.+.++|..|||+|+  +++.|..|+..|.....+.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3899999999999999999999999  6788888888877655543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.51  E-value=5.7e-08  Score=97.34  Aligned_cols=109  Identities=13%  Similarity=0.127  Sum_probs=75.4

Q ss_pred             ccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCC
Q 045639          107 EEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLS  184 (348)
Q Consensus       107 e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~  184 (348)
                      ++++.|..      |++.|. ...|+.|    ...++  ++|.|+ ||+.| .+..|..|+++|.+.+++.|  |++.|.
T Consensus       451 ~~H~~C~~------Cgk~f~-~s~LekH----~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~  515 (567)
T PLN03086        451 KNHVHCEK------CGQAFQ-QGEMEKH----MKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQ  515 (567)
T ss_pred             ccCccCCC------CCCccc-hHHHHHH----HHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccc
Confidence            44455655      778885 4566555    34443  799999 99866 66899999999999999999  988874


Q ss_pred             ChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhh
Q 045639          185 LKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMR  240 (348)
Q Consensus       185 ~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r  240 (348)
                      .-....        ..-.....|..|..++ |.+++.|..||+.|..+ .|..|+.
T Consensus       516 ~g~~~~--------d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~  561 (567)
T PLN03086        516 AGGSAM--------DVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQI  561 (567)
T ss_pred             cCcccc--------chhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHH
Confidence            210000        0000012266777775 89999999999999886 5778865

>PHA00733 hypothetical protein

Probab=98.42  E-value=1.3e-07  Score=77.73  Aligned_cols=78  Identities=13%  Similarity=0.090  Sum_probs=58.8

Q ss_pred             cccccccCCCCCCCCccccCccccccc--ccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccC
Q 045639          108 EIAQLQINNNVNNSGMKFNSRRFLEAP--GTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRL  183 (348)
Q Consensus       108 ~~~~c~~~~~~~~c~~~f~~~~~l~~~--~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f  183 (348)
                      +.+.|.+      |.+.|.....|..+  +.++...+ +.++|.|..||+.|.+...|..|++.|.  .+|.|  |++.|
T Consensus        39 ~~~~~~~------~~~~~~~~~~l~~~~~l~~~~~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r~h~--~~~~C~~CgK~F  109 (128)
T PHA00733         39 KRLIRAV------VKTLIYNPQLLDESSYLYKLLTSK-AVSPYVCPLCLMPFSSSVSLKQHIRYTE--HSKVCPVCGKEF  109 (128)
T ss_pred             hhHHHHH------HhhhccChhhhcchHHHHhhcccC-CCCCccCCCCCCcCCCHHHHHHHHhcCC--cCccCCCCCCcc
Confidence            4567776      55666665555443  23454444 4789999999999999999999999874  45777  99999


Q ss_pred             CChHHHHhhhc
Q 045639          184 SLKSQHQQQQQ  194 (348)
Q Consensus       184 ~~~~~L~~H~~  194 (348)
                      .....|..|+.
T Consensus       110 ~~~~sL~~H~~  120 (128)
T PHA00733        110 RNTDSTLDHVC  120 (128)
T ss_pred             CCHHHHHHHHH
Confidence            99999888863

>PHA00616 hypothetical protein

Probab=98.07  E-value=1.4e-06  Score=57.07  Aligned_cols=33  Identities=15%  Similarity=0.286  Sum_probs=30.6

Q ss_pred             ceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      ||+|..||+.|...+.|..|++.|+|++++.+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            699999999999999999999999999987664

>PHA00616 hypothetical protein

Probab=97.96  E-value=2.4e-06  Score=55.95  Aligned_cols=32  Identities=22%  Similarity=0.445  Sum_probs=30.2

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      ||+|..||+.|..++.|..|++.|+|++++.|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            69999999999999999999999999998876

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.89  E-value=1.1e-06  Score=51.50  Aligned_cols=22  Identities=23%  Similarity=0.525  Sum_probs=17.0

Q ss_pred             ccccCCCCCcccccCCCCCccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFP  158 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~  158 (348)
                      +|+++|+|++||.|+.|++.|.
T Consensus         4 ~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    4 RHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHSSSSSEEESSSSEEES
T ss_pred             HHhhhcCCCCCCCCCCCcCeeC
Confidence            4566788888888888888875

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.85  E-value=5.4e-06  Score=78.85  Aligned_cols=141  Identities=15%  Similarity=0.104  Sum_probs=89.0

Q ss_pred             CCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCC----------------------------
Q 045639          121 SGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKK----------------------------  172 (348)
Q Consensus       121 c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~----------------------------  172 (348)
                      |...|.+--.|-.|....| +|   .-|+|.+|+|.|.-..+|..|+|+|+-                            
T Consensus       273 CK~kYeD~F~LAQHrC~RI-V~---vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rs  348 (500)
T KOG3993|consen  273 CKEKYEDAFALAQHRCPRI-VH---VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERS  348 (500)
T ss_pred             HHHhhhhHHHHhhccCCee-EE---eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcccc
Confidence            5567777666766633111 12   459999999999999999999999951                            


Q ss_pred             -----CccccC--CCccCCChHHHHhhhc------------c--cccC---CCCCchhhccccc---cCCCC--------
Q 045639          173 -----PKAMLM--NDDRLSLKSQHQQQQQ------------Q--QFLV---SKSDDEEEDGNFR---NGNSS--------  217 (348)
Q Consensus       173 -----~k~~~c--C~~~f~~~~~L~~H~~------------~--~~C~---~f~~~~~L~~H~~---~H~~e--------  217 (348)
                           +..|.|  |+|.|+....|+.|+.            +  +.-.   .+.....+..|..   +|..+        
T Consensus       349 g~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sa  428 (500)
T KOG3993|consen  349 GDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSA  428 (500)
T ss_pred             CCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccc
Confidence                 113678  9999999999998853            0  0000   0111111111211   11111        


Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCCCCcccccccccCCCCCCCc
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLTP  265 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~~~~~~~~  265 (348)
                      .-..|.+||..|.++..-.+|.|.-..+..+.|..|.++|.....++.
T Consensus       429 el~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltr  476 (500)
T KOG3993|consen  429 ELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTR  476 (500)
T ss_pred             cccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHh
Confidence            234577788888877777777776666677888888777766665543

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.84  E-value=3e-06  Score=80.56  Aligned_cols=99  Identities=22%  Similarity=0.312  Sum_probs=67.8

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccC---C--CCCc--------hhhcccc
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLV---S--KSDD--------EEEDGNF  211 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~---~--f~~~--------~~L~~H~  211 (348)
                      -|.|..|...|-..-.|..|+-.-.--.-|+|  |+|.|....+|..|.|=++-.   +  -...        ...+.-.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            39999999999999999999864333344667  999999999999998711110   0  0000        0000000


Q ss_pred             cc--CCCCCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          212 RN--GNSSKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       212 ~~--H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      |.  -..+-.|.|.+|||.|.+...|+.|+-+|...
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcc
Confidence            10  02234799999999999999999998888643

>PHA00732 hypothetical protein

Probab=97.83  E-value=1.3e-05  Score=60.04  Aligned_cols=23  Identities=26%  Similarity=0.511  Sum_probs=18.6

Q ss_pred             ccccCCCCCccCCchhHhhhhhh
Q 045639          147 VYECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      ||.|..||+.|.+...|..|++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~   23 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARR   23 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhc
Confidence            57888888888888888888763

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.79  E-value=1e-05  Score=45.74  Aligned_cols=23  Identities=52%  Similarity=1.012  Sum_probs=21.8

Q ss_pred             eeccccCcccCChhHHHhHhhhc
Q 045639          220 HECSICGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H  242 (348)
                      |+|.+|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999876

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.56  E-value=4.1e-05  Score=45.00  Aligned_cols=26  Identities=46%  Similarity=0.703  Sum_probs=24.3

Q ss_pred             ceeccccCcccCChhHHHhHhhhcCC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      ||+|.+|++.|....+|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            69999999999999999999999864

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.43  E-value=5.2e-05  Score=42.75  Aligned_cols=23  Identities=35%  Similarity=0.768  Sum_probs=21.4

Q ss_pred             cccCCCCCccCCchhHhhhhhhc
Q 045639          148 YECKTCNRTFPSFQALGGHRASH  170 (348)
Q Consensus       148 y~C~~Cgk~F~s~~~L~~H~~~H  170 (348)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.38  E-value=9.7e-05  Score=41.68  Aligned_cols=24  Identities=46%  Similarity=0.929  Sum_probs=20.3

Q ss_pred             eeccccCcccCChhHHHhHhhhcC
Q 045639          220 HECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |.|++|++.|.+...|..|+++|.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999873

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.35  E-value=0.00011  Score=67.76  Aligned_cols=69  Identities=19%  Similarity=0.313  Sum_probs=43.4

Q ss_pred             CcccccCC--CCCccCCchhHhhhhhh-cCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCcee
Q 045639          145 CYVYECKT--CNRTFPSFQALGGHRAS-HKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHE  221 (348)
Q Consensus       145 ~kpy~C~~--Cgk~F~s~~~L~~H~~~-H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~  221 (348)
                      +|||+|++  |+|.+.....|+.|+.- |-..+...--.                          -..|.-.-...|||+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~--------------------------p~~~~~F~~~~KPYr  400 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPS--------------------------PEKMNIFSAKDKPYR  400 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCC--------------------------ccccccccccCCcee
Confidence            47777776  77777777777777653 32222211000                          001111234579999


Q ss_pred             ccccCcccCChhHHHhHh
Q 045639          222 CSICGAEFTSGQALGGHM  239 (348)
Q Consensus       222 C~~Cgk~F~~~~~L~~H~  239 (348)
                      |.+|+|+|....-|+-|.
T Consensus       401 CevC~KRYKNlNGLKYHr  418 (423)
T COG5189         401 CEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             ccccchhhccCccceecc
Confidence            999999999988888874

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.28  E-value=9.9e-05  Score=67.97  Aligned_cols=63  Identities=14%  Similarity=0.250  Sum_probs=48.3

Q ss_pred             ccccCccccccccCCCCCCCCccccCccccccccc-cccc----------CCC----CCcccccCCCCCccCCchhHhhh
Q 045639          102 DIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGT-GTGT----------GKG----GCYVYECKTCNRTFPSFQALGGH  166 (348)
Q Consensus       102 ~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~-~h~~----------~h~----g~kpy~C~~Cgk~F~s~~~L~~H  166 (348)
                      +.-.+++||+|.+.    .|.|+|.++-.|+.|+. .|..          .+.    ..|||.|.+|+|.+.....|+.|
T Consensus       342 l~v~d~KpykCpV~----gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYH  417 (423)
T COG5189         342 LKVKDGKPYKCPVE----GCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH  417 (423)
T ss_pred             eEeecCceecCCCC----CchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceec
Confidence            33345799999874    49999999999988854 3311          122    24899999999999999999999


Q ss_pred             hh
Q 045639          167 RA  168 (348)
Q Consensus       167 ~~  168 (348)
                      +.
T Consensus       418 r~  419 (423)
T COG5189         418 RK  419 (423)
T ss_pred             cc
Confidence            75

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.17  E-value=0.00018  Score=42.18  Aligned_cols=25  Identities=44%  Similarity=0.877  Sum_probs=23.4

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcC
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      ||+|..|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999999885

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.04  E-value=0.00041  Score=53.76  Aligned_cols=74  Identities=23%  Similarity=0.383  Sum_probs=22.6

Q ss_pred             ccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccCcc
Q 045639          149 ECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAE  228 (348)
Q Consensus       149 ~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~  228 (348)
                      +|..|+..|.+...|..|+....+-..-  ....+.....                  +..+.+.- -...+.|.+|++.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~--~~~~l~~~~~------------------~~~~~~~~-~~~~~~C~~C~~~   59 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP--DQKYLVDPNR------------------LLNYLRKK-VKESFRCPYCNKT   59 (100)
T ss_dssp             ---------------------------------------------------------------------SSEEBSSSS-E
T ss_pred             Cccccccccccccccccccccccccccc--cccccccccc------------------cccccccc-cCCCCCCCccCCC
Confidence            5899999999999999998653331110  0001111111                  22222211 1236999999999


Q ss_pred             cCChhHHHhHhhhcC
Q 045639          229 FTSGQALGGHMRRHR  243 (348)
Q Consensus       229 F~~~~~L~~H~r~H~  243 (348)
                      |.+...|..||+.+.
T Consensus        60 f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   60 FRSREALQEHMRSKH   74 (100)
T ss_dssp             ESSHHHHHHHHHHTT
T ss_pred             CcCHHHHHHHHcCcc
Confidence            999999999999764

>PHA00732 hypothetical protein

Probab=96.97  E-value=0.00057  Score=51.23  Aligned_cols=37  Identities=27%  Similarity=0.426  Sum_probs=29.7

Q ss_pred             ceeccccCcccCChhHHHhHhhh-cCCCCCCcccccccccC
Q 045639          219 VHECSICGAEFTSGQALGGHMRR-HRSAPVAATAAAMATTN  258 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~-H~~~~~~~~~~~~~~~~  258 (348)
                      ||.|.+||+.|.+...|..|++. |.+   +.|..|+..+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC
Confidence            58899999999999999999884 654   46888887775

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.93  E-value=0.001  Score=46.01  Aligned_cols=51  Identities=27%  Similarity=0.474  Sum_probs=36.3

Q ss_pred             ccccCCCCCccCCchhHhhhhhh-cCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceecccc
Q 045639          147 VYECKTCNRTFPSFQALGGHRAS-HKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSIC  225 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~-H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~C  225 (348)
                      .|.|+.|++ ..+...|..|... |..                                           ..+.+.|++|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~-------------------------------------------~~~~v~CPiC   37 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRS-------------------------------------------ESKNVVCPIC   37 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcC-------------------------------------------CCCCccCCCc
Confidence            478999999 4556788888654 321                                           1246889999


Q ss_pred             CcccCChhHHHhHhhhcC
Q 045639          226 GAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       226 gk~F~~~~~L~~H~r~H~  243 (348)
                      ...+.  .+|..|++.++
T Consensus        38 ~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen   38 SSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             hhhhh--hHHHHHHHHhc
Confidence            98755  38999988754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.81  E-value=0.00084  Score=38.25  Aligned_cols=25  Identities=44%  Similarity=0.763  Sum_probs=22.7

Q ss_pred             eeccccCcccCChhHHHhHhhhcCC
Q 045639          220 HECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      |+|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            6899999999999999999998753

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.79  E-value=0.001  Score=44.73  Aligned_cols=34  Identities=24%  Similarity=0.431  Sum_probs=25.0

Q ss_pred             CCCCCceeccccCcccCChhHHHhHhhhcCCCCC
Q 045639          214 GNSSKVHECSICGAEFTSGQALGGHMRRHRSAPV  247 (348)
Q Consensus       214 H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  247 (348)
                      +..+.|..|++|+..+.+..+|++|+.++++.||
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3457899999999999999999999998888775

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.75  E-value=0.00071  Score=38.00  Aligned_cols=23  Identities=30%  Similarity=0.748  Sum_probs=19.5

Q ss_pred             cccCCCCCccCCchhHhhhhhhc
Q 045639          148 YECKTCNRTFPSFQALGGHRASH  170 (348)
Q Consensus       148 y~C~~Cgk~F~s~~~L~~H~~~H  170 (348)
                      |.|..|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999876

...

>smart00355 ZnF_C2H2 zinc finger

Probab=96.30  E-value=0.0027  Score=36.02  Aligned_cols=24  Identities=38%  Similarity=0.751  Sum_probs=22.0

Q ss_pred             cccCCCCCccCCchhHhhhhhhcC
Q 045639          148 YECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       148 y~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999774

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.04  E-value=0.0033  Score=35.93  Aligned_cols=23  Identities=35%  Similarity=0.761  Sum_probs=21.2

Q ss_pred             eeccccCcccCChhHHHhHhhhc
Q 045639          220 HECSICGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H  242 (348)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999864

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.95  E-value=0.0069  Score=58.83  Aligned_cols=131  Identities=15%  Similarity=0.145  Sum_probs=90.7

Q ss_pred             CCccccCcccccccccccccCCCCC--cccccC--CCCCccCCchhHhhhhhhcCCCccccC----CCccCCChHHHH--
Q 045639          121 SGMKFNSRRFLEAPGTGTGTGKGGC--YVYECK--TCNRTFPSFQALGGHRASHKKPKAMLM----NDDRLSLKSQHQ--  190 (348)
Q Consensus       121 c~~~f~~~~~l~~~~~~h~~~h~g~--kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k~~~c----C~~~f~~~~~L~--  190 (348)
                      |...|.....|..|.+.  ..|+++  +++.|.  .|++.|.....|..|...|.+..++.+    |...+.....-.  
T Consensus       295 ~~~~~s~~~~l~~~~~~--~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (467)
T COG5048         295 CNISFSRSSPLTRHLRS--VNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPP  372 (467)
T ss_pred             ccCCccccccccccccc--cccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCCCCc
Confidence            66888888888544332  279999  999999  799999999999999999998887666    444433332211  


Q ss_pred             --hhhc-------ccccC------CCCCchhhccccccCCCCC--ceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          191 --QQQQ-------QQFLV------SKSDDEEEDGNFRNGNSSK--VHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       191 --~H~~-------~~~C~------~f~~~~~L~~H~~~H~~ek--p~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                        ....       .+.+.      .+.....+..|...|...+  .+.|..|++.|.....|..|++.|....+.-+...
T Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  452 (467)
T COG5048         373 QSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSIL  452 (467)
T ss_pred             cchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCceeeccc
Confidence              0000       22221      4444555666766676665  46677899999999999999999887665544433

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.34  E-value=0.015  Score=39.13  Aligned_cols=32  Identities=16%  Similarity=0.176  Sum_probs=23.1

Q ss_pred             CCcccccCCCCCccCCchhHhhhhhhcCCCcc
Q 045639          144 GCYVYECKTCNRTFPSFQALGGHRASHKKPKA  175 (348)
Q Consensus       144 g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~  175 (348)
                      .+.|..|++|+..+.+..+|.+|+.++.+.||
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            46799999999999999999999988776664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.14  E-value=0.01  Score=34.72  Aligned_cols=22  Identities=32%  Similarity=0.637  Sum_probs=20.6

Q ss_pred             eeccccCcccCChhHHHhHhhh
Q 045639          220 HECSICGAEFTSGQALGGHMRR  241 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~  241 (348)
                      |-|.+|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999975

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.07  E-value=0.0098  Score=33.94  Aligned_cols=23  Identities=35%  Similarity=0.707  Sum_probs=21.0

Q ss_pred             cccCCCCCccCCchhHhhhhhhc
Q 045639          148 YECKTCNRTFPSFQALGGHRASH  170 (348)
Q Consensus       148 y~C~~Cgk~F~s~~~L~~H~~~H  170 (348)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999998865

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.53  E-value=0.017  Score=32.61  Aligned_cols=23  Identities=26%  Similarity=0.600  Sum_probs=18.7

Q ss_pred             eeccccCcccCChhHHHhHhhhcC
Q 045639          220 HECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |+|..|+.... ...|..|+++|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999999888 889999999864

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=94.44  E-value=0.027  Score=61.30  Aligned_cols=101  Identities=20%  Similarity=0.253  Sum_probs=67.9

Q ss_pred             CCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhh-cCCCccccCCCccCCChHHHHhhhcc
Q 045639          117 NVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRAS-HKKPKAMLMNDDRLSLKSQHQQQQQQ  195 (348)
Q Consensus       117 ~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~-H~~~k~~~cC~~~f~~~~~L~~H~~~  195 (348)
                      ++..|+..|.+.+.+..++.   ..|+-.|.|+|..|+..|...+.|..|+|+ |....--.| ...       +.|.  
T Consensus       438 e~~~~e~~~~s~r~~~~~t~---~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c-~~g-------q~~~--  504 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTV---VLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYC-KAG-------QNHP--  504 (1406)
T ss_pred             cccchhhhhhhhccccccee---eeecccccccCCccchhhhhHHHhhhcccccccccchhHh-Hhc-------cccc--
Confidence            35667778888888766543   345667999999999999999999999997 432211111 100       0000  


Q ss_pred             cccCCCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhh
Q 045639          196 QFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMR  240 (348)
Q Consensus       196 ~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r  240 (348)
                                .+.+-...-.+.++|.|..|..+|+...+|..||.
T Consensus       505 ----------~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  505 ----------RLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ----------cccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence                      01111112235689999999999999999999986

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.30  E-value=0.023  Score=33.15  Aligned_cols=22  Identities=32%  Similarity=0.662  Sum_probs=20.3

Q ss_pred             cccCCCCCccCCchhHhhhhhh
Q 045639          148 YECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       148 y~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      |-|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999876

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.12  E-value=0.026  Score=48.18  Aligned_cols=37  Identities=19%  Similarity=0.398  Sum_probs=31.7

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCCh
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLK  186 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~  186 (348)
                      .+|.|. |++   ....+.+|.++|+++++|.|  |+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            689998 998   67788999999999999999  88876643

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=92.97  E-value=0.15  Score=55.80  Aligned_cols=115  Identities=14%  Similarity=0.117  Sum_probs=78.7

Q ss_pred             CCCccccCccccccccc--ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcc
Q 045639          120 NSGMKFNSRRFLEAPGT--GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQ  195 (348)
Q Consensus       120 ~c~~~f~~~~~l~~~~~--~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~  195 (348)
                      .|...|..-....++.+  .+.....||  |.|..|.+.|...-.+. |+-+   ...|.|  |...|.....|..|.+ 
T Consensus      1233 ~~e~~f~~~~~~~~~a~~~~~~~~~sGe--~~c~~~~~~~~~~~~~~-~l~~---~~~~~~~~~~~~~~~~~~l~~~~~- 1305 (1406)
T KOG1146|consen 1233 ALEQPFPQEPEPTATAPPKPPELPASGE--GECGAVDELLTPSFGIS-TLDV---THRYLCRQCKMAFDGEAPLTAHQR- 1305 (1406)
T ss_pred             hhhcCccCcccccccCCCCCCcCcCCCc--chhhhccccccCcccee-eccc---chhHHHHHHHhhhcchhHHHHHHH-
Confidence            34455555444433332  222223333  68999999887766555 4432   235667  8888999888888874 


Q ss_pred             cccCCCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhhhc
Q 045639          196 QFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       196 ~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H  242 (348)
                      -.|+.+.....+.-|+..+...++| |.+|...|....+|..|||.-
T Consensus      1306 k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~~ 1351 (1406)
T KOG1146|consen 1306 KFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRSS 1351 (1406)
T ss_pred             HHHhccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHHh
Confidence            2344556555566777778888899 999999999999999999963

>PRK04860 hypothetical protein; Provisional

Probab=92.67  E-value=0.066  Score=45.72  Aligned_cols=37  Identities=19%  Similarity=0.161  Sum_probs=29.6

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCCCCcccccccccC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTN  258 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~  258 (348)
                      -+|.|. |++   ....+.+|+++|+++++|.|..|+..+.
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            368897 887   6677888999999998899988876543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.20  E-value=0.096  Score=30.09  Aligned_cols=21  Identities=33%  Similarity=0.716  Sum_probs=17.6

Q ss_pred             eeccccCcccCChhHHHhHhhh
Q 045639          220 HECSICGAEFTSGQALGGHMRR  241 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~  241 (348)
                      ..|.+||+.| ....|..|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 66789999764

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=91.99  E-value=0.058  Score=48.18  Aligned_cols=49  Identities=27%  Similarity=0.408  Sum_probs=36.5

Q ss_pred             ccccC-CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccCcccCChhHHHhH-hhhcCC
Q 045639          174 KAMLM-NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGH-MRRHRS  244 (348)
Q Consensus       174 k~~~c-C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H-~r~H~~  244 (348)
                      |++-+ |.+.|.....|.+|++                      .|-|+|.||.|..-++--|..| |.+|..
T Consensus        10 kpwcwycnrefddekiliqhqk----------------------akhfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   10 KPWCWYCNREFDDEKILIQHQK----------------------AKHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             Cceeeecccccchhhhhhhhhh----------------------hccceeeeehhhhccCCCceeehhhhhhh
Confidence            44433 8888887777666653                      4669999999988888899998 777753

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=91.51  E-value=0.078  Score=29.85  Aligned_cols=23  Identities=26%  Similarity=0.554  Sum_probs=18.0

Q ss_pred             cccCCCCCccCCchhHhhhhhhcC
Q 045639          148 YECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       148 y~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      |+|..|+.... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998887 889999998753

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.24  E-value=0.16  Score=31.30  Aligned_cols=23  Identities=22%  Similarity=0.589  Sum_probs=20.6

Q ss_pred             ceeccccCcccCChhHHHhHhhh
Q 045639          219 VHECSICGAEFTSGQALGGHMRR  241 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~  241 (348)
                      +|.|.+|++.|.....|..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999863

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.31  E-value=0.19  Score=28.88  Aligned_cols=21  Identities=29%  Similarity=0.574  Sum_probs=17.2

Q ss_pred             cccCCCCCccCCchhHhhhhhh
Q 045639          148 YECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       148 y~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      ..|..||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 67788888753

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.67  E-value=0.26  Score=47.71  Aligned_cols=55  Identities=27%  Similarity=0.370  Sum_probs=46.3

Q ss_pred             CCCCchhhccccc--cCCCC--Cceecc--ccCcccCChhHHHhHhhhcCCCCCCcccccc
Q 045639          200 SKSDDEEEDGNFR--NGNSS--KVHECS--ICGAEFTSGQALGGHMRRHRSAPVAATAAAM  254 (348)
Q Consensus       200 ~f~~~~~L~~H~~--~H~~e--kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~  254 (348)
                      .|.....|..|.+  .|+++  ++|.|.  .|++.|.+...|..|..+|++..+..+....
T Consensus       298 ~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (467)
T COG5048         298 SFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLN  358 (467)
T ss_pred             CccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccccc
Confidence            4555556888888  89999  999999  7999999999999999999998876665443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=89.02  E-value=0.4  Score=32.91  Aligned_cols=36  Identities=28%  Similarity=0.481  Sum_probs=27.5

Q ss_pred             ceeccccCcccCChhHHHhHhh-hcCCC-CCCccccccc
Q 045639          219 VHECSICGAEFTSGQALGGHMR-RHRSA-PVAATAAAMA  255 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r-~H~~~-~~~~~~~~~~  255 (348)
                      .|.|++||+.| +...|..|.. .|..+ +.+.|+.|..
T Consensus         2 ~f~CP~C~~~~-~~~~L~~H~~~~H~~~~~~v~CPiC~~   39 (54)
T PF05605_consen    2 SFTCPYCGKGF-SESSLVEHCEDEHRSESKNVVCPICSS   39 (54)
T ss_pred             CcCCCCCCCcc-CHHHHHHHHHhHCcCCCCCccCCCchh
Confidence            48999999955 4678999965 56654 5688999865

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=88.74  E-value=0.23  Score=37.97  Aligned_cols=24  Identities=42%  Similarity=0.721  Sum_probs=19.0

Q ss_pred             ccccCCCCCccCCchhHhhhhhhc
Q 045639          147 VYECKTCNRTFPSFQALGGHRASH  170 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H  170 (348)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            578888888888888888888864

>smart00451 ZnF_U1 U1-like zinc finger

Probab=87.40  E-value=0.35  Score=29.69  Aligned_cols=23  Identities=30%  Similarity=0.530  Sum_probs=20.5

Q ss_pred             ccccCCCCCccCCchhHhhhhhh
Q 045639          147 VYECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      +|.|..|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=86.14  E-value=0.57  Score=48.44  Aligned_cols=41  Identities=17%  Similarity=0.349  Sum_probs=22.0

Q ss_pred             CCccCCChHHHHhhhc--ccc---cC-------CCCCchhhccccccCCCCCceecc
Q 045639          179 NDDRLSLKSQHQQQQQ--QQF---LV-------SKSDDEEEDGNFRNGNSSKVHECS  223 (348)
Q Consensus       179 C~~~f~~~~~L~~H~~--~~~---C~-------~f~~~~~L~~H~~~H~~ekp~~C~  223 (348)
                      |...|-....|..|++  -|.   |.       -|.....|..|.|.+.    |.|.
T Consensus       188 C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE  240 (669)
T KOG2231|consen  188 CHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCE  240 (669)
T ss_pred             hhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhcC----cccc
Confidence            6666666666666665  222   21       3444555666655433    6665

>KOG1280 consensus Uncharacterized conserved protein containing ZZ-type Zn-finger [General function prediction only]

Probab=83.61  E-value=3  Score=39.58  Aligned_cols=26  Identities=23%  Similarity=0.360  Sum_probs=19.7

Q ss_pred             cccccCCCCCccCCchhHhhhhhh-cC
Q 045639          146 YVYECKTCNRTFPSFQALGGHRAS-HK  171 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~-H~  171 (348)
                      ..|.|++|++.=.+...|..|... |.
T Consensus        78 qSftCPyC~~~Gfte~~f~~Hv~s~Hp  104 (381)
T KOG1280|consen   78 QSFTCPYCGIMGFTERQFGTHVLSQHP  104 (381)
T ss_pred             ccccCCcccccccchhHHHHHhhhcCc
Confidence            458899999887777788888764 53

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	348
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	4e-10
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	5e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 53.6 bits (129), Expect = 4e-10
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 147 VYECKTCNRTFPSFQALGGHRASHKKPKAML 177
            Y C  C R F S QALGGH   H++ +A L
Sbjct: 6   SYTCSFCKREFRSAQALGGHMNVHRRDRARL 36

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 50.5 bits (121), Expect = 5e-09
 Identities = 15/27 (55%), Positives = 17/27 (62%)

Query: 217 SKVHECSICGAEFTSGQALGGHMRRHR 243
            + + CS C  EF S QALGGHM  HR
Sbjct: 4   PRSYTCSFCKREFRSAQALGGHMNVHR 30

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 22/100 (22%), Positives = 33/100 (33%), Gaps = 11/100 (11%)

Query: 144 GCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSD 203
           G   + CK C+  + +   L  H           MN+        H+         SK  
Sbjct: 16  GASKFRCKDCSAAYDTLVELTVH-----------MNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 204 DEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHR 243
                      ++ KV +C  CG  F S Q L  HM + +
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	348
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.92
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.82
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.8
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.78
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.77
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.76
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.75
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.74
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.72
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.67
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.66
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.66
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.58
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.58
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.53
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.51
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.51
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.5
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.5
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.49
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.48
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.48
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.47
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.47
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.46
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.44
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.44
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.43
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.42
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.41
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.4
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.39
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.36
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.36
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.35
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.33
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.32
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.32
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.29
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.29
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.29
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.26
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.25
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.25
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.25
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.24
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.24
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.23
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.22
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.22
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.22
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.21
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.21
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.2
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.19
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.17
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.17
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.17
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.16
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.15
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.14
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.12
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.11
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.09
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.03
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.02
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.02
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.02
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.01
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.01
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.01
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.01
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.01
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.01
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.99
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.99
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.98
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.98
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.97
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.97
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.97
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.97
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.96
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.96
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.95
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.94
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.91
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.91
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.9
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.9
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.89
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.89
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.86
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.86
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.84
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.83
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.82
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.81
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.8
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.77
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.75
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.73
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.7
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.68
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.67
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.66
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.65
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.65
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.65
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.64
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.6
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.57
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.54
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.52
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.51
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.48
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.45
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.45
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.42
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.41
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.41
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.4
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.38
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.37
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.37
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.35
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.35
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.34
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.69
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.69
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.33
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.33
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.31
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.3
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.27
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.26
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.26
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.19
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.49
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.18
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.16
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.13
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.13
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.11
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.1
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.09
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.05
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.05
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.05
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.31
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.29
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.03
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.02
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.01
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.01
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.05
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.65
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.7
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.27
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.17
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.74
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.61
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.46
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.87
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	83.79
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	82.92
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	82.25

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.92  E-value=7.4e-27  Score=203.60  Aligned_cols=155  Identities=19%  Similarity=0.250  Sum_probs=120.6

Q ss_pred             CccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639           99 AHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus        99 ~h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      .|+++|.++++|.|.+      |++.|.....|..    |++.|.++++|.|..|++.|.....|..|+++|.++++|.|
T Consensus        11 ~h~~~~~~~~~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   80 (190)
T 2i13_A           11 AQAALEPGEKPYACPE------CGKSFSRSDHLAE----HQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKC   80 (190)
T ss_dssp             --------------------------CCSSHHHHH----GGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             hhhhhcCCCCCCcCCC------CccccCCHHHHHH----HHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccC
Confidence            4778889999999998      7799999988854    45578899999999999999999999999999999999999


Q ss_pred             --CCccCCChHHHHhhhc------ccccC----CCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          179 --NDDRLSLKSQHQQQQQ------QQFLV----SKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       179 --C~~~f~~~~~L~~H~~------~~~C~----~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                        |++.|.....|..|++      +|.|.    .|.....|..|+++|+++++|.|.+||+.|.....|..|+++|++++
T Consensus        81 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  160 (190)
T 2i13_A           81 PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK  160 (190)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred             cccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence              9999999999999986      78875    78889999999999999999999999999999999999999999999


Q ss_pred             CCcccccccccCCCCCC
Q 045639          247 VAATAAAMATTNTTLSL  263 (348)
Q Consensus       247 ~~~~~~~~~~~~~~~~~  263 (348)
                      +|.|..|+..|.....+
T Consensus       161 ~~~C~~C~~~f~~~~~L  177 (190)
T 2i13_A          161 PYKCPECGKSFSRRDAL  177 (190)
T ss_dssp             CEECTTTCCEESSHHHH
T ss_pred             CeECCCCCCccCCHHHH
Confidence            99999999988765544

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.91  E-value=2.7e-26  Score=200.01  Aligned_cols=139  Identities=22%  Similarity=0.330  Sum_probs=121.9

Q ss_pred             ccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC-
Q 045639          100 HYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM-  178 (348)
Q Consensus       100 h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c-  178 (348)
                      |+++|.++++|.|..      |++.|.....|..    |++.|.++++|.|..|++.|.....|..|+++|.++++|.| 
T Consensus        40 H~~~h~~~~~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  109 (190)
T 2i13_A           40 HQRTHTGEKPYKCPE------CGKSFSDKKDLTR----HQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP  109 (190)
T ss_dssp             GGGCC---CCEECTT------TCCEESSHHHHHH----HHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECT
T ss_pred             HHHHcCCCCCccCCC------cCchhCCHHHHHH----HHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCC
Confidence            889999999999998      7899999999954    45578899999999999999999999999999999999999 


Q ss_pred             -CCccCCChHHHHhhhc------ccccC----CCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCC
Q 045639          179 -NDDRLSLKSQHQQQQQ------QQFLV----SKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPV  247 (348)
Q Consensus       179 -C~~~f~~~~~L~~H~~------~~~C~----~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  247 (348)
                       |++.|.....|..|++      +|.|.    .|.....|..|+++|+++++|.|.+||+.|.....|..|+++|+|++|
T Consensus       110 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          110 ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             TTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence             9999999999999987      78886    789999999999999999999999999999999999999999999987


Q ss_pred             C
Q 045639          248 A  248 (348)
Q Consensus       248 ~  248 (348)
                      |
T Consensus       190 ~  190 (190)
T 2i13_A          190 S  190 (190)
T ss_dssp             -
T ss_pred             C
Confidence            4

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=1.5e-23  Score=173.15  Aligned_cols=107  Identities=16%  Similarity=0.217  Sum_probs=92.5

Q ss_pred             ccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccc
Q 045639          133 APGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGN  210 (348)
Q Consensus       133 ~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H  210 (348)
                      .|...|..+|+|+++|.|.+||+.|.....|..|+++|+++++|.|  |++.|.....                  |..|
T Consensus         8 ~h~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~------------------L~~H   69 (133)
T 2lt7_A            8 KHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEY------------------RTKH   69 (133)
T ss_dssp             CCSSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHH------------------HHHH
T ss_pred             HHHhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccc------------------hhhh
Confidence            4444566789999999999999999999999999999999999999  9999999888                  5556


Q ss_pred             cccCCCCCceeccccCcccCChhHHHhHhhhcCCCCC------Cccccccccc
Q 045639          211 FRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPV------AATAAAMATT  257 (348)
Q Consensus       211 ~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~------~~~~~~~~~~  257 (348)
                      +++|++++||.|.+||+.|.....|..|+++|++++|      |.|..|+..+
T Consensus        70 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~  122 (133)
T 2lt7_A           70 EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQ  122 (133)
T ss_dssp             HHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSC
T ss_pred             ccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchh
Confidence            6789999999999999999999999999999987754      5666676544

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.86  E-value=7e-23  Score=178.33  Aligned_cols=147  Identities=16%  Similarity=0.182  Sum_probs=126.4

Q ss_pred             cCccccccccCCCCCCCCccccCcccccccccccccCCCCCccccc--CCCCCccCCchhHhhhhhhcCCCccccC----
Q 045639          105 EQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYEC--KTCNRTFPSFQALGGHRASHKKPKAMLM----  178 (348)
Q Consensus       105 ~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C--~~Cgk~F~s~~~L~~H~~~H~~~k~~~c----  178 (348)
                      ..+++|.|..    ..|++.|.....|..    |+++|+++++|.|  ..|++.|.....|..|+++|.++++|.|    
T Consensus         8 ~~~~~~~C~~----~~C~~~f~~~~~L~~----H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   79 (190)
T 1tf6_A            8 VVYKRYICSF----ADCGAAYNKNWKLQA----HLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG   79 (190)
T ss_dssp             --CCCCBCSS----TTTCCBCSSHHHHHH----HHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSS
T ss_pred             CCCcceeCCC----CCCcchhCCHHHHHH----HHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCC
Confidence            4567899941    128899999999854    4557889999999  8899999999999999999999999887    


Q ss_pred             CCccCCChHHHHhhhc--------cccc--C----CCCCchhhccccccCCCCCceeccc--cCcccCChhHHHhHhhhc
Q 045639          179 NDDRLSLKSQHQQQQQ--------QQFL--V----SKSDDEEEDGNFRNGNSSKVHECSI--CGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       179 C~~~f~~~~~L~~H~~--------~~~C--~----~f~~~~~L~~H~~~H~~ekp~~C~~--Cgk~F~~~~~L~~H~r~H  242 (348)
                      |++.|.....|..|++        +|.|  .    .|.....|..|+++|++++||.|.+  ||+.|.+...|..|+++|
T Consensus        80 C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H  159 (190)
T 1tf6_A           80 CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH  159 (190)
T ss_dssp             CCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSS
T ss_pred             CCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHh
Confidence            9999999999999982        6777  4    7999999999999999999999988  999999999999999999


Q ss_pred             CCCCCCcccc---cccccCCCCC
Q 045639          243 RSAPVAATAA---AMATTNTTLS  262 (348)
Q Consensus       243 ~~~~~~~~~~---~~~~~~~~~~  262 (348)
                      ++   +.|..   |+..+.....
T Consensus       160 ~~---~~C~~~~~C~~~f~~~~~  179 (190)
T 1tf6_A          160 AG---YPCKKDDSCSFVGKTWTL  179 (190)
T ss_dssp             CS---CCCCSTTTCCCCCSCHHH
T ss_pred             CC---CcCCCCCcCCCccccHHH
Confidence            98   78888   8877765433

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=4.9e-23  Score=170.14  Aligned_cols=105  Identities=12%  Similarity=0.053  Sum_probs=91.8

Q ss_pred             ccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC-
Q 045639          100 HYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM-  178 (348)
Q Consensus       100 h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c-  178 (348)
                      |.++|.|+++|.|.+      |++.|.....|..    |+++|+|+++|.|.+||+.|.....|..|+++|+++++|.| 
T Consensus        13 ~~~~h~Gek~y~C~~------C~k~F~~~~~L~~----H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   82 (133)
T 2lt7_A           13 YELIVDGRVYYICIV------CKRSYVCLTSLRR----HFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCL   82 (133)
T ss_dssp             EEEEETTEEEEEETT------TCCEESCHHHHHH----HHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEES
T ss_pred             ceeecCCCcCeECCC------CCCCcCCHHHHHH----HHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCC
Confidence            678899999999998      8899999999955    55689999999999999999999999999999999999999 


Q ss_pred             -CCccCCChHHHHhhhcccccCCCCCchhhccccccCCC------CCceeccccCcccCCh
Q 045639          179 -NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNS------SKVHECSICGAEFTSG  232 (348)
Q Consensus       179 -C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~------ekp~~C~~Cgk~F~~~  232 (348)
                       |++.|.....|..|+                  ++|.+      .++|+|.+|++.|...
T Consensus        83 ~C~k~F~~~~~L~~H~------------------~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           83 ACGKSFINYQFMSSHI------------------KSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             SSCCEESSHHHHHHHH------------------HHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCCCCcCCHHHHHHHh------------------HHhcCCCCCCCCCCeecCCCCchhhhc
Confidence             999999999966654                  44444      4679999999988643

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=2.2e-21  Score=163.14  Aligned_cols=122  Identities=18%  Similarity=0.184  Sum_probs=105.7

Q ss_pred             cccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcc--------cccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          103 IHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYV--------YECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       103 ~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kp--------y~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      ++..+..|.|.+      |++.|.....|..|++.   .|.++.+        |.|..|++.|.....|..|+++|.+++
T Consensus        19 ~~~~~~~~~C~~------C~~~f~~~~~L~~H~~~---~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   89 (155)
T 2rpc_A           19 IDEAQLSRPKKS------CDRTFSTMHELVTHVTM---EHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK   89 (155)
T ss_dssp             CCTTCCSSSCCC------CCCCBSSHHHHHHHHHT---TTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCC
T ss_pred             echhhccccccc------CCcccCCHHHHHHHHHh---hcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCC
Confidence            345667888887      88999999999666432   2666554        899999999999999999999999999


Q ss_pred             cccC----CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccc--cCcccCChhHHHhHhhhcCCCCCC
Q 045639          175 AMLM----NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSI--CGAEFTSGQALGGHMRRHRSAPVA  248 (348)
Q Consensus       175 ~~~c----C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~  248 (348)
                      +|.|    |++.|.....                  |..|+++|+++++|.|.+  |++.|.+...|..|+++|+++++|
T Consensus        90 ~~~C~~~~C~~~f~~~~~------------------L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~  151 (155)
T 2rpc_A           90 PFPCPFPGCGKIFARSEN------------------LKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSG  151 (155)
T ss_dssp             SEECSCTTTCCEESCHHH------------------HHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCS
T ss_pred             cccCCcCCCCCccCCHHH------------------HHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            9998    9999998887                  556668999999999997  999999999999999999999999


Q ss_pred             ccc
Q 045639          249 ATA  251 (348)
Q Consensus       249 ~~~  251 (348)
                      .|.
T Consensus       152 ~c~  154 (155)
T 2rpc_A          152 PSS  154 (155)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.83  E-value=1.6e-21  Score=169.62  Aligned_cols=133  Identities=14%  Similarity=0.071  Sum_probs=118.6

Q ss_pred             ccccccCcccccc--ccCCCCCCCCccccCcccccccccccccCCCCCcccccC--CCCCccCCchhHhhhh-hhc-CCC
Q 045639          100 HYDIHEQEEIAQL--QINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECK--TCNRTFPSFQALGGHR-ASH-KKP  173 (348)
Q Consensus       100 h~~~h~~e~~~~c--~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~--~Cgk~F~s~~~L~~H~-~~H-~~~  173 (348)
                      |+++|.++++|.|  .+      |++.|.....|..    |+++|.++++|.|.  .|++.|.+...|..|+ +.| .++
T Consensus        33 H~~~h~~~~~~~C~~~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~  102 (190)
T 1tf6_A           33 HLCKHTGEKPFPCKEEG------CEKGFTSLHHLTR----HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI  102 (190)
T ss_dssp             HHHHHHCCCSSCCSSTT------CCCCCSSHHHHHH----HHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTT
T ss_pred             HHHhcCCCCCccCCCCC------CChhhCCHHHHHH----HHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCc
Confidence            8888999999999  66      8899999999954    55688999999999  8999999999999999 778 577


Q ss_pred             ccccC----CCccCCChHHHHhhhc------ccccC------CCCCchhhccccccCCCCCceeccc---cCcccCChhH
Q 045639          174 KAMLM----NDDRLSLKSQHQQQQQ------QQFLV------SKSDDEEEDGNFRNGNSSKVHECSI---CGAEFTSGQA  234 (348)
Q Consensus       174 k~~~c----C~~~f~~~~~L~~H~~------~~~C~------~f~~~~~L~~H~~~H~~ekp~~C~~---Cgk~F~~~~~  234 (348)
                      ++|.|    |++.|.....|..|++      +|.|.      .|.....|..|+++|++   |.|.+   |++.|.....
T Consensus       103 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~  179 (190)
T 1tf6_A          103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL  179 (190)
T ss_dssp             SCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHH
T ss_pred             ceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHH
Confidence            88888    9999999999999987      67763      78999999999999998   99999   9999999999


Q ss_pred             HHhHhhhcCCC
Q 045639          235 LGGHMRRHRSA  245 (348)
Q Consensus       235 L~~H~r~H~~~  245 (348)
                      |..|+++|+++
T Consensus       180 l~~H~~~h~~e  190 (190)
T 1tf6_A          180 YLKHVAECHQD  190 (190)
T ss_dssp             HHHHHTTCC--
T ss_pred             HHHHHHhhcCC
Confidence            99999999874

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=6.7e-22  Score=159.99  Aligned_cols=116  Identities=18%  Similarity=0.253  Sum_probs=95.3

Q ss_pred             CccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC----CCc
Q 045639          106 QEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM----NDD  181 (348)
Q Consensus       106 ~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c----C~~  181 (348)
                      ++++|.|..    ..|++.|.....|..|+    ++| ++++|.|..|++.|.....|..|+++|.++++|.|    |++
T Consensus         2 ~~~~~~C~~----~~C~~~f~~~~~l~~H~----~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~   72 (124)
T 1ubd_C            2 EPRTIACPH----KGCTKMFRDNSAMRKHL----HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK   72 (124)
T ss_dssp             ---CEECCS----TTCCCEESSHHHHHHHH----GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCC
T ss_pred             CCCcccCCC----CCCcCccCCHHHHHHHH----HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcC
Confidence            356788872    12889999999996554    466 78999999999999999999999999999999998    999


Q ss_pred             cCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceecc--ccCcccCChhHHHhHhhhcCCCCCC
Q 045639          182 RLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECS--ICGAEFTSGQALGGHMRRHRSAPVA  248 (348)
Q Consensus       182 ~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~  248 (348)
                      .|.....                  |..|+++|.++++|.|.  .||+.|.+...|..|+++|++++++
T Consensus        73 ~f~~~~~------------------l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           73 RFSLDFN------------------LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             EESCHHH------------------HHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             ccCCHHH------------------HHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            9998888                  55566789999999996  5999999999999999999998754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.9e-21  Score=156.92  Aligned_cols=114  Identities=17%  Similarity=0.286  Sum_probs=99.0

Q ss_pred             cCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhh---cCCCccccC--C
Q 045639          105 EQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRAS---HKKPKAMLM--N  179 (348)
Q Consensus       105 ~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~---H~~~k~~~c--C  179 (348)
                      +++++|.|.+      |++.|.....|..    |++.|.++++|.|..|++.|.+...|..|++.   |.++++|.|  |
T Consensus         3 ~~~~~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C   72 (124)
T 2dlq_A            3 SGSSGVECPT------CHKKFLSKYYLKV----HNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVC   72 (124)
T ss_dssp             CCCSSCCCTT------TCCCCSSHHHHHH----HHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSS
T ss_pred             CCCCCCCCCC------CCCcCCCHHHHHH----HHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCC
Confidence            4678899988      7799999998854    45578899999999999999999999999985   578889999  9


Q ss_pred             CccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhh-hcCCCC
Q 045639          180 DDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMR-RHRSAP  246 (348)
Q Consensus       180 ~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~  246 (348)
                      ++.|.....                  |..|+++|++++||.|.+|++.|.+...|..|++ .|.++.
T Consensus        73 ~~~f~~~~~------------------l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           73 QETFRRRME------------------LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             CCEESSHHH------------------HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             CCccCCHHH------------------HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            999999888                  5556678999999999999999999999999997 576653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=5.1e-21  Score=160.69  Aligned_cols=130  Identities=15%  Similarity=0.149  Sum_probs=90.7

Q ss_pred             cccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCC-----CCCccCCchhHhhhhhhcCCCccccC----
Q 045639          108 EIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKT-----CNRTFPSFQALGGHRASHKKPKAMLM----  178 (348)
Q Consensus       108 ~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~-----Cgk~F~s~~~L~~H~~~H~~~k~~~c----  178 (348)
                      .+|.|.+      |++.|.+...|..|++. ..+|.++++|.|..     |++.|.....|..|+++|.++++|.|    
T Consensus         2 ~~~~C~~------C~~~f~~~~~L~~H~~~-~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   74 (155)
T 2gli_A            2 TDCRWDG------CSQEFDSQEQLVHHINS-EHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEG   74 (155)
T ss_dssp             CBCCBTT------CCCBCSCHHHHHHHHHH-HTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTT
T ss_pred             CcCCcCC------CccccCCHHHHHHHHHh-hccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCC
Confidence            4567766      77888888888555331 12677888888764     34888888888888888888888888    


Q ss_pred             CCccCCChHHHHhhhc------ccccC------CCCCchhhcccc-ccCCCCCceeccc--cCcccCChhHHHhHhhhcC
Q 045639          179 NDDRLSLKSQHQQQQQ------QQFLV------SKSDDEEEDGNF-RNGNSSKVHECSI--CGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       179 C~~~f~~~~~L~~H~~------~~~C~------~f~~~~~L~~H~-~~H~~ekp~~C~~--Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |++.|.....|..|++      +|.|.      .|.....|..|+ ++|+++++|.|.+  ||+.|.+...|..|+++|+
T Consensus        75 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           75 CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             CCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            8888888888776654      34332      455555566665 5666666666666  6666666666666666665


Q ss_pred             C
Q 045639          244 S  244 (348)
Q Consensus       244 ~  244 (348)
                      |
T Consensus       155 g  155 (155)
T 2gli_A          155 G  155 (155)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=1.4e-21  Score=156.58  Aligned_cols=112  Identities=18%  Similarity=0.309  Sum_probs=98.5

Q ss_pred             cCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccC--CCCCccCCchhHhhhhhhcCCCccccC--CC
Q 045639          105 EQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECK--TCNRTFPSFQALGGHRASHKKPKAMLM--ND  180 (348)
Q Consensus       105 ~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~  180 (348)
                      +++++|.|..    ..|++.|.....|..    |+++|.++++|.|.  .|++.|.....|..|+++|.++++|.|  |+
T Consensus         2 ~~~~~~~C~~----~~C~~~f~~~~~l~~----H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   73 (119)
T 2jp9_A            2 SEKRPFMCAY----PGCNKRYFKLSHLQM----HSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ   73 (119)
T ss_dssp             CSSCCBCCCS----TTSCCCBSCHHHHHH----HHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTC
T ss_pred             CCCeeeeCCC----CCCcchhCCHHHHHH----HHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccC
Confidence            5678999974    137899999999954    45578889999999  799999999999999999999999999  99


Q ss_pred             ccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceec--cccCcccCChhHHHhHhhhc
Q 045639          181 DRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHEC--SICGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       181 ~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C--~~Cgk~F~~~~~L~~H~r~H  242 (348)
                      +.|.....                  |..|+++|+++++|.|  .+||+.|.+...|..|+++|
T Consensus        74 ~~f~~~~~------------------l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           74 RKFSRSDH------------------LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CEESCHHH------------------HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             chhCCHHH------------------HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999888                  5556678999999999  89999999999999999987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=9.7e-20  Score=145.44  Aligned_cols=96  Identities=23%  Similarity=0.304  Sum_probs=82.9

Q ss_pred             cccccCCCCCcccccCCCCCccCCchhHhhhhhh--cCCCcccc-C--CCccC--CChHHHHhhhcccccCCCCCchhhc
Q 045639          136 TGTGTGKGGCYVYECKTCNRTFPSFQALGGHRAS--HKKPKAML-M--NDDRL--SLKSQHQQQQQQQFLVSKSDDEEED  208 (348)
Q Consensus       136 ~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~--H~~~k~~~-c--C~~~f--~~~~~L~~H~~~~~C~~f~~~~~L~  208 (348)
                      ..|+++|+++++|.|.+|++.|.....|..|+++  |.+.+++. |  |++.|  .....                  |.
T Consensus         8 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~------------------l~   69 (115)
T 2dmi_A            8 KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRS------------------LL   69 (115)
T ss_dssp             CCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCC------------------CC
T ss_pred             hhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHH------------------HH
Confidence            4566789999999999999999999999999999  87777655 6  88877  44443                  88


Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAA  249 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~  249 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|......+
T Consensus        70 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             CCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSC
T ss_pred             HHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccCC
Confidence            89999999999999999999999999999999987765433

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=2e-19  Score=141.36  Aligned_cols=92  Identities=18%  Similarity=0.272  Sum_probs=84.2

Q ss_pred             CCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCc
Q 045639          142 KGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKV  219 (348)
Q Consensus       142 h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp  219 (348)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|  |++.|.....                  |..|+++|.++++
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~------------------l~~H~~~h~~~~~   73 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDH------------------LRDHRYIHSKEKP   73 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHH------------------HHHHGGGSCCCCT
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHH------------------HHHHHHHhCCCCC
Confidence            4567899999999999999999999999999999999  9999999888                  5566688999999


Q ss_pred             eeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          220 HECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      |.|.+|++.|.....|..|+++|++++++.++
T Consensus        74 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~  105 (106)
T 2ee8_A           74 FKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA  105 (106)
T ss_dssp             TSCSSSCCCCSSHHHHHHHHHHTTSCCCCCCC
T ss_pred             eECCCcCCcccCHHHHHHHHHHhCCCCCCcCC
Confidence            99999999999999999999999999987543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=1.9e-19  Score=138.85  Aligned_cols=89  Identities=20%  Similarity=0.309  Sum_probs=81.8

Q ss_pred             CCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCc
Q 045639          142 KGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKV  219 (348)
Q Consensus       142 h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp  219 (348)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|  |++.|.....                  |..|+++|.++++
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~------------------l~~H~~~h~~~~~   64 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSS------------------LNKHLRIHSDERP   64 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHH------------------HHHHHHHSCCCCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHH------------------HHHHHHHhCCCCC
Confidence            5678999999999999999999999999999999999  9999999888                  5556678999999


Q ss_pred             eeccccCcccCChhHHHhHhhhcCCCCCC
Q 045639          220 HECSICGAEFTSGQALGGHMRRHRSAPVA  248 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  248 (348)
                      |.|.+|++.|.....|..|+++|++++..
T Consensus        65 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           65 FKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999998753

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.5e-19  Score=141.42  Aligned_cols=94  Identities=20%  Similarity=0.263  Sum_probs=83.6

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGN  215 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~  215 (348)
                      +.++|+++++|.|.+|++.|.....|..|+++|.  ++|.|  |++.|.....                  |..|++ |+
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~------------------l~~H~~-H~   65 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPEL------------------KQEHES-KC   65 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHH------------------HHHHHH-HC
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHH------------------HHHHHH-cC
Confidence            4567899999999999999999999999999994  67888  9999999887                  555555 99


Q ss_pred             CCCceeccccCcccCChhHHHhHhh-hcCCCCCCcccc
Q 045639          216 SSKVHECSICGAEFTSGQALGGHMR-RHRSAPVAATAA  252 (348)
Q Consensus       216 ~ekp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~  252 (348)
                      ++++|+|.+|++.|.....|..|++ +|.++++|++..
T Consensus        66 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           66 EYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             STGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCCC
T ss_pred             CCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            9999999999999999999999997 999999887653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=6.7e-19  Score=141.80  Aligned_cols=106  Identities=23%  Similarity=0.265  Sum_probs=94.2

Q ss_pred             CCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCce
Q 045639          143 GGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVH  220 (348)
Q Consensus       143 ~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~  220 (348)
                      +|+++|.|.+|++.|.....|..|+++|.++++|.|  |++.|.....|..|++              .| ..|.++++|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~--------------~~-~~~~~~~~~   67 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEA--------------RN-CMNRSEQVF   67 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHH--------------HC-CCCSCCCCE
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHh--------------hh-hcCCCCCCe
Confidence            578999999999999999999999999999999999  9999999999776642              11 146789999


Q ss_pred             eccccCcccCChhHHHhHhhhcCCCCCCcccccccccCCCCCC
Q 045639          221 ECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSL  263 (348)
Q Consensus       221 ~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~~~~~~  263 (348)
                      .|.+|++.|.....|..|+++|+++++|.|..|+..|.....+
T Consensus        68 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  110 (124)
T 2dlq_A           68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDL  110 (124)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHH
T ss_pred             ECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHH
Confidence            9999999999999999999999999999999999988765544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.75  E-value=3.4e-19  Score=142.64  Aligned_cols=101  Identities=19%  Similarity=0.294  Sum_probs=91.5

Q ss_pred             CCCcccccCC--CCCccCCchhHhhhhhhcCCCccccC----CCccCCChHHHHhhhcccccCCCCCchhhccccccCCC
Q 045639          143 GGCYVYECKT--CNRTFPSFQALGGHRASHKKPKAMLM----NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNS  216 (348)
Q Consensus       143 ~g~kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~k~~~c----C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~  216 (348)
                      +|+++|.|..  |++.|.....|..|+++|.++++|.|    |++.|.....                  |..|+++|.+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~------------------l~~H~~~h~~   63 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQ------------------LKRHQRRHTG   63 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHH------------------HHHHHHHHHC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHH------------------HHHHHHHcCC
Confidence            5789999997  99999999999999999999999988    8999988888                  5556678899


Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCCCCCCcc--cccccccCCCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRSAPVAAT--AAAMATTNTTL  261 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~--~~~~~~~~~~~  261 (348)
                      +++|.|.+||+.|.....|..|+++|+++++|.|  ..|+..|....
T Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~  110 (119)
T 2jp9_A           64 VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSD  110 (119)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHH
T ss_pred             CCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHH
Confidence            9999999999999999999999999999999999  78988876543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.74  E-value=4.4e-19  Score=134.99  Aligned_cols=85  Identities=22%  Similarity=0.373  Sum_probs=75.5

Q ss_pred             CCcccccC--CCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCc
Q 045639          144 GCYVYECK--TCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKV  219 (348)
Q Consensus       144 g~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp  219 (348)
                      |+++|.|.  .|++.|.....|..|+++|.++++|.|  |++.|.....                  |..|+++|+++++
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~------------------l~~H~~~h~~~~~   62 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDH------------------LTTHIRTHTGEKP   62 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH------------------HHHHHHHHHCCCC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHH------------------HHHHHHHcCCCCC
Confidence            46899998  599999999999999999999999999  9999999888                  4555678899999


Q ss_pred             eeccccCcccCChhHHHhHhhhcCCCC
Q 045639          220 HECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |.|.+||+.|.....|..|+++|++++
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           63 FACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             EECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            999999999999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.9e-18  Score=144.80  Aligned_cols=118  Identities=16%  Similarity=0.142  Sum_probs=106.1

Q ss_pred             CcccccCCCCCccCCchhHhhhhh---hcCCCccccC----C---CccCCChHHHHhhhc------ccccC------CCC
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRA---SHKKPKAMLM----N---DDRLSLKSQHQQQQQ------QQFLV------SKS  202 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~---~H~~~k~~~c----C---~~~f~~~~~L~~H~~------~~~C~------~f~  202 (348)
                      |.+|.|..|++.|.+...|..|++   +|.++++|.|    |   ++.|.....|..|++      +|.|.      .|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            468999999999999999999998   7889999887    3   488999999999987      67763      789


Q ss_pred             CchhhccccccCCCCCceeccc--cCcccCChhHHHhHh-hhcCCCCCCcccc--cccccCCCCC
Q 045639          203 DDEEEDGNFRNGNSSKVHECSI--CGAEFTSGQALGGHM-RRHRSAPVAATAA--AMATTNTTLS  262 (348)
Q Consensus       203 ~~~~L~~H~~~H~~ekp~~C~~--Cgk~F~~~~~L~~H~-r~H~~~~~~~~~~--~~~~~~~~~~  262 (348)
                      ....|..|+++|+++++|.|.+  ||+.|.+...|..|+ ++|.++++|.|..  |+..|.....
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~  145 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSS  145 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHH
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHH
Confidence            9999999999999999999999  999999999999999 8999999999988  9988865443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=3e-18  Score=135.62  Aligned_cols=86  Identities=20%  Similarity=0.394  Sum_probs=79.6

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCC
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSK  218 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ek  218 (348)
                      .|+++++|.| .|++.|.....|..|+++|.++++|.|  |++.|.....                  |..|+++|.+++
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~------------------l~~H~~~h~~~~   64 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHH------------------LVGHMKIHTGIK   64 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHH------------------HHHHHTTTCCCC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHH------------------HHHHHHHcCCCC
Confidence            6889999999 999999999999999999999999999  9999998888                  556668899999


Q ss_pred             ceeccccCcccCChhHHHhHhhhcCCC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      +|.|.+|++.|.....|..|+++|...
T Consensus        65 ~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           65 PYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             CeeCCCCcchhcCHHHHHHHHHHcccc
Confidence            999999999999999999999998753

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.71  E-value=6.4e-18  Score=136.40  Aligned_cols=101  Identities=18%  Similarity=0.292  Sum_probs=90.2

Q ss_pred             CcccccC--CCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCce
Q 045639          145 CYVYECK--TCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVH  220 (348)
Q Consensus       145 ~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~  220 (348)
                      +++|.|.  .|++.|.+...|..|+++| ++++|.|  |++.|.....                  |..|+++|.++++|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~------------------l~~H~~~h~~~~~~   63 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSK------------------LKRHQLVHTGEKPF   63 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHH------------------HHHHGGGTSCCCCE
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHH------------------HHHHHHHcCCCCCe
Confidence            5789999  8999999999999999999 8899999  9999999888                  55666889999999


Q ss_pred             eccc--cCcccCChhHHHhHhhhcCCCCCCccc--ccccccCCCCCCC
Q 045639          221 ECSI--CGAEFTSGQALGGHMRRHRSAPVAATA--AAMATTNTTLSLT  264 (348)
Q Consensus       221 ~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~~~--~~~~~~~~~~~~~  264 (348)
                      .|.+  |++.|.....|..|+++|.++++|.|.  .|+..|.....+.
T Consensus        64 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~  111 (124)
T 1ubd_C           64 QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLK  111 (124)
T ss_dssp             ECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTH
T ss_pred             eCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHH
Confidence            9986  999999999999999999999999996  5999888776663

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=1.4e-18  Score=129.69  Aligned_cols=80  Identities=25%  Similarity=0.494  Sum_probs=73.4

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccc
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSI  224 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~  224 (348)
                      ||.|..|++.|.....|..|+++|.++++|.|  |++.|.....                  |..|+++|.++++|.|.+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~------------------l~~H~~~h~~~~~~~C~~   62 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSD------------------MKKHTFIHTGEKPHKCQV   62 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHH------------------HHHHHHHHHTCCCEECTT
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHH------------------HHHHHHHhcCCCCCcCCC
Confidence            68999999999999999999999999999999  9999999888                  555567889999999999


Q ss_pred             cCcccCChhHHHhHhhhcCC
Q 045639          225 CGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       225 Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      ||+.|.+...|..|+++|+|
T Consensus        63 C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           63 CGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TSCEESSHHHHHHHHHHHC-
T ss_pred             cchhhCChHHHHHHHHhhCC
Confidence            99999999999999999975

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=5.1e-18  Score=130.46  Aligned_cols=86  Identities=26%  Similarity=0.450  Sum_probs=77.1

Q ss_pred             CCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCC--C
Q 045639          143 GGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSS--K  218 (348)
Q Consensus       143 ~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~e--k  218 (348)
                      +|+++|.|.+|++.|.....|..|+++|.++++|.|  |++.|.....|                  ..|+++|.++  +
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l------------------~~H~~~h~~~~~~   64 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRM------------------SYHVRSHDGSVGK   64 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHH------------------HHHHHHHCCCCCS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHH------------------HHHHHHhcCCCCC
Confidence            578999999999999999999999999999999999  99999998884                  4555778876  9


Q ss_pred             ceeccccCcccCChhHHHhHhh-hcCCCC
Q 045639          219 VHECSICGAEFTSGQALGGHMR-RHRSAP  246 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r-~H~~~~  246 (348)
                      +|.|.+|++.|.+...|..|++ +|.++.
T Consensus        65 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           65 PYICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             ceECCCccchhCCHHHHHHHHHHhcCCCC
Confidence            9999999999999999999986 787753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.67  E-value=2.9e-17  Score=116.28  Aligned_cols=58  Identities=24%  Similarity=0.572  Sum_probs=50.6

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccc
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSI  224 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~  224 (348)
                      ||||+|.+|||.|.....|..|+++|                                            +|+|||.|.+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~H--------------------------------------------t~ekp~~C~~   37 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAH--------------------------------------------LGYRPRSCPE   37 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHH--------------------------------------------HTCCCEECTT
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHh--------------------------------------------CCCcCeECCC
Confidence            68999999999999888888777665                                            5678899999


Q ss_pred             cCcccCChhHHHhHhhhcCCCC
Q 045639          225 CGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       225 Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      ||+.|.+...|..|+++|+|++
T Consensus        38 C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C           38 CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCcCCHHHHHHHhCccCCCC
Confidence            9999999999999999999875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.66  E-value=7.8e-17  Score=135.19  Aligned_cols=104  Identities=18%  Similarity=0.217  Sum_probs=91.0

Q ss_pred             CCCCcccccCCCCCccCCchhHhhhhhh-cCCCcc--------ccC--CCccCCChHHHHhhhcccccCCCCCchhhccc
Q 045639          142 KGGCYVYECKTCNRTFPSFQALGGHRAS-HKKPKA--------MLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGN  210 (348)
Q Consensus       142 h~g~kpy~C~~Cgk~F~s~~~L~~H~~~-H~~~k~--------~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H  210 (348)
                      ......|.|..|++.|.....|..|++. |.+.++        |.|  |++.|.....                  |..|
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~------------------l~~H   81 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK------------------LVNH   81 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHH------------------HHHH
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHH------------------HHHH
Confidence            4456899999999999999999999997 877654        677  9999988887                  5566


Q ss_pred             cccCCCCCceeccc--cCcccCChhHHHhHhhhcCCCCCCcccc--cccccCCCCCC
Q 045639          211 FRNGNSSKVHECSI--CGAEFTSGQALGGHMRRHRSAPVAATAA--AMATTNTTLSL  263 (348)
Q Consensus       211 ~~~H~~ekp~~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~~~~--~~~~~~~~~~~  263 (348)
                      +++|+++++|.|.+  |++.|.....|..|+++|+++++|.|..  |+..|.....+
T Consensus        82 ~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L  138 (155)
T 2rpc_A           82 IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDR  138 (155)
T ss_dssp             THHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHH
T ss_pred             HHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHH
Confidence            67899999999998  9999999999999999999999999997  99888765544

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.66  E-value=4.3e-17  Score=126.32  Aligned_cols=83  Identities=22%  Similarity=0.448  Sum_probs=75.7

Q ss_pred             CCcccccCC--CCCccCCchhHhhhhhhcCCCccccC----CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCC
Q 045639          144 GCYVYECKT--CNRTFPSFQALGGHRASHKKPKAMLM----NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSS  217 (348)
Q Consensus       144 g~kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~k~~~c----C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~e  217 (348)
                      .+++|.|..  |++.|.....|..|+++|.++++|.|    |++.|.....                  |..|+++|+++
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~------------------l~~H~~~h~~~   73 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDE------------------LTRHYRKHTGA   73 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHH------------------HHHHHHHHTSC
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHH------------------HHHHHHHhCCC
Confidence            457899996  99999999999999999999999998    9999988887                  55566789999


Q ss_pred             CceeccccCcccCChhHHHhHhhhcCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      ++|.|.+|++.|.....|..|+++|++
T Consensus        74 ~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           74 KPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            999999999999999999999999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=6e-17  Score=122.75  Aligned_cols=81  Identities=20%  Similarity=0.396  Sum_probs=74.1

Q ss_pred             CcccccCC--CCCccCCchhHhhhhhhcCCCccccC----CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCC
Q 045639          145 CYVYECKT--CNRTFPSFQALGGHRASHKKPKAMLM----NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSK  218 (348)
Q Consensus       145 ~kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~k~~~c----C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ek  218 (348)
                      ..+|.|..  |++.|.....|..|+++|.++++|.|    |++.|.....                  |..|+++|++++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~------------------l~~H~~~h~~~~   64 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDE------------------LTRHYRKHTGHR   64 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHH------------------HHHHHHHHHCCC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHH------------------HHHHHHHcCCCC
Confidence            46899999  99999999999999999999999998    9999988887                  555667899999


Q ss_pred             ceeccccCcccCChhHHHhHhhhcC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      +|.|.+||+.|.....|..|+++|.
T Consensus        65 ~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           65 PFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             CEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhhC
Confidence            9999999999999999999999984

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.58  E-value=4.4e-16  Score=122.10  Aligned_cols=90  Identities=14%  Similarity=0.147  Sum_probs=79.5

Q ss_pred             cCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCcc
Q 045639          105 EQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDR  182 (348)
Q Consensus       105 ~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~  182 (348)
                      ..+++|.|.+      |++.|.....|..    |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|  |++.
T Consensus        13 ~~~~~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   82 (106)
T 2ee8_A           13 KTKKEFICKF------CGRHFTKSYNLLI----HERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKG   82 (106)
T ss_dssp             CCCCCCBCSS------SCCBCSSHHHHHH----HHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCC
T ss_pred             CCCcCeECCC------CCCccCCHHHHHH----HHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCc
Confidence            4678899988      7899999998854    55678899999999999999999999999999999999999  9999


Q ss_pred             CCChHHHHhhhcccccCCCCCchhhccccccCCCCCceec
Q 045639          183 LSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHEC  222 (348)
Q Consensus       183 f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C  222 (348)
                      |.....                  |..|+++|.++++|.+
T Consensus        83 f~~~~~------------------L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           83 FCQSRT------------------LAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CSSHHH------------------HHHHHHHTTSCCCCCC
T ss_pred             ccCHHH------------------HHHHHHHhCCCCCCcC
Confidence            999888                  5566689999999865

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.5e-16  Score=123.99  Aligned_cols=94  Identities=14%  Similarity=0.008  Sum_probs=82.0

Q ss_pred             CccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639           99 AHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus        99 ~h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      .++++|+++++|.|.+      |++.|.....|..|++    +|  +++|.|.+|++.|.....|..|++ |.++++|.|
T Consensus         6 s~~~~h~~~~~~~C~~------C~~~f~~~~~l~~H~~----~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C   72 (107)
T 1wjp_A            6 SGASPVENKEVYQCRL------CNAKLSSLLEQGSHER----LC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTC   72 (107)
T ss_dssp             CCCCCCCCCCCCBCTT------TCCBCSSHHHHHHHHH----HH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEE
T ss_pred             ccCcccCCCcCeECCC------CCCccCCHHHHHHHHH----HC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccC
Confidence            4678899999999998      7899999999966654    44  379999999999999999999996 999999999


Q ss_pred             --CCccCCChHHHHhhhcccccCCCCCchhhccccc-cCCCCCceecc
Q 045639          179 --NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFR-NGNSSKVHECS  223 (348)
Q Consensus       179 --C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~-~H~~ekp~~C~  223 (348)
                        |++.|.....|.                  .|++ +|+++++|.|.
T Consensus        73 ~~C~~~f~~~~~L~------------------~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           73 LECMRTFKSSFSIW------------------RHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             GGGTEECSSHHHHH------------------HHHHHTSCCCCCCCCC
T ss_pred             ccccchhCCHHHHH------------------HHHHHHcCCCCCCCCC
Confidence              999999998855                  5555 89999999885

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.2e-15  Score=117.32  Aligned_cols=90  Identities=17%  Similarity=0.194  Sum_probs=78.1

Q ss_pred             ccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCc
Q 045639          104 HEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDD  181 (348)
Q Consensus       104 h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~  181 (348)
                      +.++++|.|.+      |++.|.....|..    |++.|.++++|.|..|++.|.....|..|+++|.++++|.|  |++
T Consensus         3 ~~~~~~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   72 (96)
T 2dmd_A            3 SGSSGPHKCEV------CGKCFSRKDKLKT----HMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPY   72 (96)
T ss_dssp             CCCCCCCCBTT------TTBCCCCHHHHHH----HGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSC
T ss_pred             CCCCcCeECCC------CCCccCCHHHHHH----HHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCC
Confidence            46788999998      8899999999854    55688899999999999999999999999999999999999  999


Q ss_pred             cCCChHHHHhhhcccccCCCCCchhhccccccCCCCCcee
Q 045639          182 RLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHE  221 (348)
Q Consensus       182 ~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~  221 (348)
                      .|.....                  |..|+++|+++++..
T Consensus        73 ~f~~~~~------------------l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           73 ASRNSSQ------------------LTVHLRSHTGDSGPS   94 (96)
T ss_dssp             EESSHHH------------------HHHHHTTCCSCCCCC
T ss_pred             ccCCHHH------------------HHHHHHHhcCCCCCC
Confidence            9999988                  555667888887643

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=9.7e-15  Score=109.69  Aligned_cols=82  Identities=22%  Similarity=0.378  Sum_probs=67.4

Q ss_pred             cccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCC
Q 045639          136 TGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGN  215 (348)
Q Consensus       136 ~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~  215 (348)
                      .+|+++|+++++|.|.+|++.|.....|..|+++|.+..                                        .
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~----------------------------------------~   43 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN----------------------------------------F   43 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS----------------------------------------C
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc----------------------------------------C
Confidence            356778999999999999999999999999987764321                                        1


Q ss_pred             CCCceeccccCcccCChhHHHhHhhhcCCCCCCccccccccc
Q 045639          216 SSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATT  257 (348)
Q Consensus       216 ~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~  257 (348)
                      .+++|.|.+|++.|.....|..|+++|++++++.|..++..+
T Consensus        44 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           44 VPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             CCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            246899999999999999999999999999988888876543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=1.2e-15  Score=121.44  Aligned_cols=87  Identities=9%  Similarity=-0.031  Sum_probs=74.8

Q ss_pred             CccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccc-cCCCCCcc--CCchhHhhhhhhcCCCcc
Q 045639           99 AHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYE-CKTCNRTF--PSFQALGGHRASHKKPKA  175 (348)
Q Consensus        99 ~h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~-C~~Cgk~F--~s~~~L~~H~~~H~~~k~  175 (348)
                      .|+++|+++++|.|.+      |++.|.....|..|++.  ..|.++++|. |.+|++.|  .....|..|+++|.++++
T Consensus         9 ~H~~~H~~~~~~~C~~------C~k~f~~~~~L~~H~~~--~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~   80 (115)
T 2dmi_A            9 LYGSIFTGASKFRCKD------CSAAYDTLVELTVHMNE--TGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV   80 (115)
T ss_dssp             CCCCCCCCCCSEEBSS------SSCEESSHHHHHHHHHH--TCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS
T ss_pred             hheeeeCCCCCEECCc------cCchhcCHHHHHHHHHH--hCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc
Confidence            4899999999999998      88999999999666442  1266777655 99999999  999999999999999999


Q ss_pred             ccC--CCccCCChHHHHhhh
Q 045639          176 MLM--NDDRLSLKSQHQQQQ  193 (348)
Q Consensus       176 ~~c--C~~~f~~~~~L~~H~  193 (348)
                      |.|  |++.|.....|..|+
T Consensus        81 ~~C~~C~k~f~~~~~L~~H~  100 (115)
T 2dmi_A           81 LKCMYCGHSFESLQDLSVHM  100 (115)
T ss_dssp             CBCSSSCCBCSSHHHHHHHH
T ss_pred             eECCCCCCccCCHHHHHHHH
Confidence            999  999999999966554

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.52  E-value=6.4e-16  Score=117.25  Aligned_cols=87  Identities=15%  Similarity=0.213  Sum_probs=71.5

Q ss_pred             CccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccC
Q 045639          106 QEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRL  183 (348)
Q Consensus       106 ~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f  183 (348)
                      ++++|.|..    ..|++.|.....|..    |+++|.++++|.|..|++.|.....|..|+++|.++++|.|  |++.|
T Consensus         1 ~~k~~~C~~----~~C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   72 (90)
T 1a1h_A            1 MERPYACPV----ESCDRRFSQSGSLTR----HIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF   72 (90)
T ss_dssp             --CCEECCS----SSCCCEESSHHHHHH----HHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             CCCceECCC----CCCCCccCCHHHHHH----HHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchh
Confidence            467899973    128899999999954    45578889999999999999999999999999999999999  99999


Q ss_pred             CChHHHHhhhcccccCCCCCchhhccccccCCCCC
Q 045639          184 SLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSK  218 (348)
Q Consensus       184 ~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ek  218 (348)
                      .....|                  ..|+++|+++|
T Consensus        73 ~~~~~l------------------~~H~~~H~~~k   89 (90)
T 1a1h_A           73 ARSDER------------------KRHTKIHLRQK   89 (90)
T ss_dssp             SSHHHH------------------HHHHGGGGC--
T ss_pred             CCHHHH------------------HHHHHHhcccC
Confidence            999884                  45557787775

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.7e-14  Score=106.53  Aligned_cols=66  Identities=27%  Similarity=0.541  Sum_probs=54.9

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCce
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVH  220 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~  220 (348)
                      .+.++++|.|.+|++.|.....|..|+++|                                            +++++|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h--------------------------------------------~~~~~~   47 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTH--------------------------------------------TGEKPY   47 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTT--------------------------------------------CCSCSE
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHc--------------------------------------------CCCcCe
Confidence            566789999999999999888887776555                                            456778


Q ss_pred             eccccCcccCChhHHHhHhhhcCCCCCCcc
Q 045639          221 ECSICGAEFTSGQALGGHMRRHRSAPVAAT  250 (348)
Q Consensus       221 ~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~  250 (348)
                      .|.+|++.|.....|..|+++|+++++|.|
T Consensus        48 ~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           48 KCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             ECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             eCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            888899999888889999888888888765

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=2.7e-15  Score=116.52  Aligned_cols=69  Identities=20%  Similarity=0.226  Sum_probs=54.9

Q ss_pred             ccccCCCCCcccccCCCCCccC-CchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFP-SFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGN  215 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~-s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~  215 (348)
                      .|+++|+++++|.|.+|++.|. ....|..|+++|                                            +
T Consensus        14 ~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h--------------------------------------------~   49 (98)
T 2gqj_A           14 QWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVC--------------------------------------------Q   49 (98)
T ss_dssp             HHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHH--------------------------------------------H
T ss_pred             HHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHH--------------------------------------------c
Confidence            3555677777777777777777 777777776655                                            3


Q ss_pred             C-CCceeccccCcccCChhHHHhHhhhcCCCCCCc
Q 045639          216 S-SKVHECSICGAEFTSGQALGGHMRRHRSAPVAA  249 (348)
Q Consensus       216 ~-ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~  249 (348)
                      + +++|.|.+|++.|.+...|..|+++|+++++..
T Consensus        50 ~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           50 KLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             HHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            4 678999999999999999999999999998744

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.51  E-value=3.6e-16  Score=118.77  Aligned_cols=80  Identities=13%  Similarity=0.186  Sum_probs=70.8

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceec
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHEC  222 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C  222 (348)
                      ++||.|.+|++.|.....|..|+++|.++++|.|  |++.|.....|..|                  +++|. +++|.|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H------------------~~~h~-~~~~~c   61 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH------------------RDIQH-ILPILE   61 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH------------------HHHHT-HHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHH------------------HHHhC-CCcchH
Confidence            4799999999999999999999999999999999  99999999885555                  45555 389999


Q ss_pred             cccCcccCChhHHHhHhhhcC
Q 045639          223 SICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       223 ~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      ..|++.|.....|..|++.+.
T Consensus        62 ~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           62 DKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhHHHHHHHH
Confidence            999999999999999998754

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=5.2e-15  Score=109.54  Aligned_cols=70  Identities=19%  Similarity=0.340  Sum_probs=62.2

Q ss_pred             CCCcccccCC--CCCccCCchhHhhhhh-hcCCCccccC----CCccCCChHHHHhhhcccccCCCCCchhhccccccCC
Q 045639          143 GGCYVYECKT--CNRTFPSFQALGGHRA-SHKKPKAMLM----NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGN  215 (348)
Q Consensus       143 ~g~kpy~C~~--Cgk~F~s~~~L~~H~~-~H~~~k~~~c----C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~  215 (348)
                      +|+++|.|..  |++.|.....|..|++ +|.++++|.|    |++.|.....                  |..|+++|+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~------------------L~~H~~~H~   64 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKH------------------LKEHMKLHS   64 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHH------------------HHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHH------------------HHHHHHHhC
Confidence            5678899987  9999999999999999 7999999988    8999998888                  555667899


Q ss_pred             CCCceeccccCcccC
Q 045639          216 SSKVHECSICGAEFT  230 (348)
Q Consensus       216 ~ekp~~C~~Cgk~F~  230 (348)
                      +++||.|.+||+.|.
T Consensus        65 ~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           65 DTRDYICEFSGPSSG   79 (79)
T ss_dssp             TSCCCSCCSSSCCCC
T ss_pred             CCCCeeCCCCCCCCC
Confidence            999999999999994

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.50  E-value=2.1e-14  Score=105.16  Aligned_cols=64  Identities=28%  Similarity=0.505  Sum_probs=55.9

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCce
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVH  220 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~  220 (348)
                      .++++++|+|..|++.|.....|..|+++|                                            +++++|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H--------------------------------------------~~~~~~   46 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVH--------------------------------------------TGEKPY   46 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHH--------------------------------------------CCCCSE
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHc--------------------------------------------CCCCCE
Confidence            567889999999999999998888887666                                            446789


Q ss_pred             eccccCcccCChhHHHhHhhhcCCCCCC
Q 045639          221 ECSICGAEFTSGQALGGHMRRHRSAPVA  248 (348)
Q Consensus       221 ~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  248 (348)
                      +|.+|++.|.....|..|+++|+++++|
T Consensus        47 ~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           47 RCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             ECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.49  E-value=2.4e-15  Score=106.39  Aligned_cols=59  Identities=15%  Similarity=0.242  Sum_probs=53.4

Q ss_pred             CccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          106 QEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       106 ~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      .|+||.|.+      ||+.|.....|    ..|+++|+|++||.|.+||+.|.....|..|+++|+|++
T Consensus         1 SEKpy~C~~------C~k~F~~~~~L----~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNF------CGKTYRDASGL----SRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTT------TCCEESSHHHH----HHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCC------CCCEeCCHHHH----HHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            379999998      88999999999    455668999999999999999999999999999999875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.48  E-value=6.8e-15  Score=110.05  Aligned_cols=76  Identities=21%  Similarity=0.321  Sum_probs=67.6

Q ss_pred             cccc--CCCCCccCCchhHhhhhhhcCCCccccC----CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCce
Q 045639          147 VYEC--KTCNRTFPSFQALGGHRASHKKPKAMLM----NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVH  220 (348)
Q Consensus       147 py~C--~~Cgk~F~s~~~L~~H~~~H~~~k~~~c----C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~  220 (348)
                      ||.|  ..||+.|.....|..|+++|.++++|.|    |++.|.....|.                  .|+++|++   |
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~------------------~H~~~h~~---~   59 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK------------------RHEKVHAG---Y   59 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHH------------------HHHHHHHS---E
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHH------------------HHHHHhCC---C
Confidence            6889  8899999999999999999999999988    899998888844                  55567776   9


Q ss_pred             eccc---cCcccCChhHHHhHhhhcC
Q 045639          221 ECSI---CGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       221 ~C~~---Cgk~F~~~~~L~~H~r~H~  243 (348)
                      .|.+   |++.|.....|..|+++|+
T Consensus        60 ~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           60 PCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            9999   9999999999999999885

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.48  E-value=6.3e-14  Score=106.15  Aligned_cols=64  Identities=25%  Similarity=0.356  Sum_probs=53.3

Q ss_pred             ccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCC
Q 045639          139 GTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSK  218 (348)
Q Consensus       139 ~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ek  218 (348)
                      ..++.+.++|.|++||+.|.....|..|+++|                                            +++|
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H--------------------------------------------~~~k   55 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLL--------------------------------------------HAAQ   55 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTT--------------------------------------------SCSS
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhc--------------------------------------------cCCC
Confidence            34677889999999999999988888877655                                            5678


Q ss_pred             ceeccccCcccCChhHHHhHh-hhcCCCC
Q 045639          219 VHECSICGAEFTSGQALGGHM-RRHRSAP  246 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~-r~H~~~~  246 (348)
                      ||.|.+|++.|.+...|..|+ ++|.+|.
T Consensus        56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           56 VFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             ccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            899999999999999999996 5787764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.6e-14  Score=102.77  Aligned_cols=65  Identities=18%  Similarity=0.335  Sum_probs=56.1

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCce
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVH  220 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~  220 (348)
                      .|+++++|.|.+|++.|.....|..|+++|                                            +++++|
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H--------------------------------------------~~~~~~   38 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIH--------------------------------------------CTDRPF   38 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGG--------------------------------------------CCSCSE
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHc--------------------------------------------CCCCCE
Confidence            577889999999999999988888776655                                            456789


Q ss_pred             eccccCcccCChhHHHhHhhhcCCCCCCc
Q 045639          221 ECSICGAEFTSGQALGGHMRRHRSAPVAA  249 (348)
Q Consensus       221 ~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~  249 (348)
                      .|.+|++.|.....|..|+++|+++++.+
T Consensus        39 ~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A           39 KCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             ECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             eCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999988654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.47  E-value=1.1e-15  Score=124.40  Aligned_cols=114  Identities=10%  Similarity=-0.003  Sum_probs=83.3

Q ss_pred             cccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccC------CchhHhhhhhhcCCCccc
Q 045639          103 IHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFP------SFQALGGHRASHKKPKAM  176 (348)
Q Consensus       103 ~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~------s~~~L~~H~~~H~~~k~~  176 (348)
                      ++.|.++|.|....    +...|.....+..     ......++.+.|.+|++.|.      ....|..|+ .|+++++|
T Consensus         6 ~~~~~k~~~~~~k~----~~~~~s~ee~~~~-----~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~   75 (129)
T 2wbt_A            6 VDSGSKKYLSNHKG----IFIHVTLEELKRY-----HQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQF   75 (129)
T ss_dssp             CCTTCCGGGGCSSC----EEEECCHHHHHHH-----TTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSE
T ss_pred             hcccccccccccCC----eeeeecHHhhhcc-----ccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCe
Confidence            46788899887622    2223322211100     11233457788999888776      556667776 68899999


Q ss_pred             cC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          177 LM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       177 ~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      .|  |++.|.....|.                  .|+++|  ++||.|.+||+.|.+...|..|+++|++..
T Consensus        76 ~C~~C~k~f~~~~~l~------------------~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           76 VCPLCLMPFSSSVSLK------------------QHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             ECTTTCCEESSHHHHH------------------HHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             ECCCCCcccCCHhHHH------------------HHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            99  999999998854                  555777  899999999999999999999999999863

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.1e-14  Score=112.60  Aligned_cols=70  Identities=13%  Similarity=0.105  Sum_probs=61.0

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhh-hc---CCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccc-cc
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRA-SH---KKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGN-FR  212 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~-~H---~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H-~~  212 (348)
                      ...+|++||.|..||+.|.....|..|++ +|   .++++|.|  |++.|.....                  |..| ++
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~------------------L~~H~~r   72 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA------------------LSEHNLK   72 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHH------------------HHTHHHH
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHH------------------HHHHHHH
Confidence            35678999999999999999999999997 59   66899999  9999999888                  5566 58


Q ss_pred             cCCCCCceeccccCc
Q 045639          213 NGNSSKVHECSICGA  227 (348)
Q Consensus       213 ~H~~ekp~~C~~Cgk  227 (348)
                      +|+++|||.|.++.+
T Consensus        73 ~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           73 YHPGEENFKLTMVKR   87 (102)
T ss_dssp             TSTTCCCEEEEECCC
T ss_pred             hcCCCCCeeCCcccC
Confidence            999999999998553

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=3.7e-14  Score=103.39  Aligned_cols=65  Identities=29%  Similarity=0.530  Sum_probs=56.3

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSS  217 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~e  217 (348)
                      +.++|+++++|.|.+|++.|.....|..|+++|                                            .++
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h--------------------------------------------~~~   40 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH--------------------------------------------TGE   40 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGG--------------------------------------------GCS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhc--------------------------------------------CCC
Confidence            445788999999999999999988888887655                                            456


Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +||+|.+|++.|.....|..|+++|+++.
T Consensus        41 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           41 KPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            78999999999999999999999998765

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=3.5e-14  Score=108.75  Aligned_cols=79  Identities=18%  Similarity=0.231  Sum_probs=70.2

Q ss_pred             cCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCC--ccccC--CC
Q 045639          105 EQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKP--KAMLM--ND  180 (348)
Q Consensus       105 ~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~--k~~~c--C~  180 (348)
                      +++++|.|.+      |++.|.....|..    |+++|.++++|.|.+|++.|.....|..|+++|.++  ++|.|  |+
T Consensus         3 ~~~~~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~   72 (95)
T 2yt9_A            3 SGSSGVACEI------CGKIFRDVYHLNR----HKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCG   72 (95)
T ss_dssp             CCCSCEECSS------SCCEESSSHHHHH----HHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSC
T ss_pred             CCCCCeECCC------CCCccCChHHHHH----HHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCcc
Confidence            5778999998      7899999999844    556889999999999999999999999999999987  89999  99


Q ss_pred             ccCCChHHHHhhh
Q 045639          181 DRLSLKSQHQQQQ  193 (348)
Q Consensus       181 ~~f~~~~~L~~H~  193 (348)
                      +.|.....|..|+
T Consensus        73 ~~f~~~~~L~~H~   85 (95)
T 2yt9_A           73 KGFSRPDHLNGHI   85 (95)
T ss_dssp             CCBSSHHHHHHHH
T ss_pred             chhCCHHHHHHHH
Confidence            9999999966664

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=3.2e-14  Score=110.33  Aligned_cols=75  Identities=13%  Similarity=0.137  Sum_probs=54.8

Q ss_pred             ccCCchhHhhhhhhcCCCccccC--CCccC-CChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccCcccCCh
Q 045639          156 TFPSFQALGGHRASHKKPKAMLM--NDDRL-SLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSG  232 (348)
Q Consensus       156 ~F~s~~~L~~H~~~H~~~k~~~c--C~~~f-~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~  232 (348)
                      .|.....|..|++.|.++++|.|  |++.| .....                  |..|+++| +++||.|.+||+.|...
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~------------------L~~H~~~h-~~k~~~C~~Cgk~F~~~   75 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEG------------------LKKHMENC-KQEMFTCHHCGKQLRSL   75 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHH------------------HHHHHHHH-CCCCCCCSSSCCCCSSH
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHH------------------HHHHHHHH-CCCCeECCCCCCeeCCH
Confidence            44555666666666666666666  66666 56655                  34444667 78899999999999999


Q ss_pred             hHHHhH-hhhcCCCCCCc
Q 045639          233 QALGGH-MRRHRSAPVAA  249 (348)
Q Consensus       233 ~~L~~H-~r~H~~~~~~~  249 (348)
                      ..|..| +++|+++..++
T Consensus        76 ~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           76 AGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             HHHHHHHHHHTCCCSSCS
T ss_pred             HHHHHHhHHhcCCCCCCC
Confidence            999999 99998765543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=2.1e-14  Score=113.21  Aligned_cols=81  Identities=16%  Similarity=0.224  Sum_probs=73.4

Q ss_pred             cccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CC
Q 045639          103 IHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--ND  180 (348)
Q Consensus       103 ~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~  180 (348)
                      .|+++++|.| .      |++.|.....|..    |++.|.++++|.|.+|++.|.....|..|+++|.++++|.|  |+
T Consensus         4 ~h~~~k~~~C-~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   72 (110)
T 2csh_A            4 GSSGDKLYPC-Q------CGKSFTHKSQRDR----HMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICA   72 (110)
T ss_dssp             CCCCCCCEEC-T------TSCEESSHHHHHH----HHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSC
T ss_pred             CCCCCCCEec-c------CCCccCCHHHHHH----HHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCc
Confidence            5789999999 8      7899999999955    45578899999999999999999999999999999999999  99


Q ss_pred             ccCCChHHHHhhhc
Q 045639          181 DRLSLKSQHQQQQQ  194 (348)
Q Consensus       181 ~~f~~~~~L~~H~~  194 (348)
                      +.|.....|..|++
T Consensus        73 ~~f~~~~~l~~H~~   86 (110)
T 2csh_A           73 KRFMWRDSFHRHVT   86 (110)
T ss_dssp             CEESCHHHHHHHHH
T ss_pred             chhcCHHHHHHHHH
Confidence            99999999887764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.42  E-value=6.5e-15  Score=109.50  Aligned_cols=75  Identities=17%  Similarity=0.204  Sum_probs=66.2

Q ss_pred             ccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCCh
Q 045639          109 IAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLK  186 (348)
Q Consensus       109 ~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~  186 (348)
                      +|.|.+      |++.|.....|..    |++.|.++++|.|..|++.|.....|..|+++|.++++|.|  |++.|...
T Consensus         1 ~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   70 (82)
T 2kmk_A            1 SFDCKI------CGKSFKRSSTLST----HLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQS   70 (82)
T ss_dssp             CEECSS------SCCEESSHHHHHH----HHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSH
T ss_pred             CccCCC------CcccccCchhHHH----HHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCCh
Confidence            467776      8899999999854    45578899999999999999999999999999999999999  99999999


Q ss_pred             HHHHhhh
Q 045639          187 SQHQQQQ  193 (348)
Q Consensus       187 ~~L~~H~  193 (348)
                      ..|..|+
T Consensus        71 ~~l~~H~   77 (82)
T 2kmk_A           71 SNLITHS   77 (82)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9966654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2.5e-13  Score=100.18  Aligned_cols=67  Identities=24%  Similarity=0.472  Sum_probs=55.7

Q ss_pred             cccccCCCCCcccccCCCCCccCCchhHhhhhh-hcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccC
Q 045639          136 TGTGTGKGGCYVYECKTCNRTFPSFQALGGHRA-SHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNG  214 (348)
Q Consensus       136 ~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~-~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H  214 (348)
                      .+|+++|+++++|.|.+|++.|.....|..|++ .|.+                                          
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~------------------------------------------   41 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTE------------------------------------------   41 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS------------------------------------------
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCC------------------------------------------
Confidence            356778999999999999999999999988876 3422                                          


Q ss_pred             CCCCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          215 NSSKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       215 ~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                       .+++|.|.+|++.|.....|..|+++|++.
T Consensus        42 -~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           42 -NVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             -SCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             -CCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence             137899999999999999999999986554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.6e-13  Score=101.42  Aligned_cols=69  Identities=22%  Similarity=0.457  Sum_probs=57.4

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCce
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVH  220 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~  220 (348)
                      +|+|+++|.|.+|++.|.....|..|+++|.+.                                         .++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~-----------------------------------------~~~~~~   39 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAET-----------------------------------------VAALRF   39 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHH-----------------------------------------TTTCCE
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc-----------------------------------------CCCccc
Confidence            478999999999999999999999998887431                                         136889


Q ss_pred             eccccCcccCChhHHHhHh-hhcCCCCCCcc
Q 045639          221 ECSICGAEFTSGQALGGHM-RRHRSAPVAAT  250 (348)
Q Consensus       221 ~C~~Cgk~F~~~~~L~~H~-r~H~~~~~~~~  250 (348)
                      .|.+|++.|.....|..|+ +.|.++++...
T Consensus        40 ~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A           40 PCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            9999999999999999999 56777665433

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.3e-13  Score=98.53  Aligned_cols=62  Identities=29%  Similarity=0.561  Sum_probs=53.7

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhhh-cCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCC
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRAS-HKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSK  218 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~-H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ek  218 (348)
                      ++|+|+++|.|..|++.|.....|..|+++ |.                                           ++++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~-------------------------------------------~~~~   39 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK-------------------------------------------RNVK   39 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSS-------------------------------------------SSCC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcC-------------------------------------------CCCc
Confidence            468889999999999999999998888775 31                                           3568


Q ss_pred             ceeccccCcccCChhHHHhHhhhcCC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      +|.|.+||+.|.+...|..|+++|++
T Consensus        40 ~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           40 VYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CeECCCCCCccCCHHHHHHHHHHHcC
Confidence            89999999999999999999999876

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=2.3e-13  Score=106.68  Aligned_cols=68  Identities=10%  Similarity=-0.028  Sum_probs=59.2

Q ss_pred             cCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccc-cC---CCCCceeccccCcccCChhHHHhH-hhhc
Q 045639          170 HKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFR-NG---NSSKVHECSICGAEFTSGQALGGH-MRRH  242 (348)
Q Consensus       170 H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~-~H---~~ekp~~C~~Cgk~F~~~~~L~~H-~r~H  242 (348)
                      -+|+++|.|  |++.|..+..|.                  .|++ +|   ++++||+|.+||+.|.....|..| +++|
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~------------------~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~H   74 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFT------------------FHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH   74 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHH------------------HHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTS
T ss_pred             CCCCcCcCCCCCCCccCCHHHHH------------------HHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhc
Confidence            368999999  999999998855                  4555 58   678999999999999999999999 8999


Q ss_pred             CCCCCCccccccc
Q 045639          243 RSAPVAATAAAMA  255 (348)
Q Consensus       243 ~~~~~~~~~~~~~  255 (348)
                      +|+++|.|..+..
T Consensus        75 tgekpy~C~~~~~   87 (102)
T 2ghf_A           75 PGEENFKLTMVKR   87 (102)
T ss_dssp             TTCCCEEEEECCC
T ss_pred             CCCCCeeCCcccC
Confidence            9999999997543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.7e-13  Score=99.34  Aligned_cols=65  Identities=14%  Similarity=0.058  Sum_probs=53.4

Q ss_pred             cccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhcccccc
Q 045639          136 TGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRN  213 (348)
Q Consensus       136 ~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~  213 (348)
                      ..|+++|.++++|.|.+||+.|.....|..       +++|.|  |++.|.....                  |..|+++
T Consensus         7 ~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~------------------l~~H~~~   61 (73)
T 2ctu_A            7 GKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAA------------------LNKDEGN   61 (73)
T ss_dssp             CCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCS------------------SCCCSSC
T ss_pred             HHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHH------------------HHHHHHh
Confidence            345668888899999999999988888876       677888  8888777665                  7788889


Q ss_pred             CCCCCceecccc
Q 045639          214 GNSSKVHECSIC  225 (348)
Q Consensus       214 H~~ekp~~C~~C  225 (348)
                      |+++++|.|.+|
T Consensus        62 H~~~~~~~C~~C   73 (73)
T 2ctu_A           62 ESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCSSCCCC
T ss_pred             hcCCCCCCCCCC
Confidence            999999999987

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.35  E-value=4.1e-13  Score=92.80  Aligned_cols=57  Identities=28%  Similarity=0.471  Sum_probs=45.5

Q ss_pred             CCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceecc
Q 045639          144 GCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECS  223 (348)
Q Consensus       144 g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~  223 (348)
                      |+++|.|.+|++.|.....|..|+++|                                            ++++||.|.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h--------------------------------------------~~~~~~~C~   36 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTH--------------------------------------------TGEKPYKCE   36 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHH--------------------------------------------HCCCCEECS
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHc--------------------------------------------CCCCCcCCC
Confidence            467899999999999988888887665                                            446789999


Q ss_pred             ccCcccCChhHHHhHhhhcCC
Q 045639          224 ICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       224 ~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      +|++.|.....|..|+++|++
T Consensus        37 ~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C           37 FCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             SSSCEESSHHHHHHHHHHHC-
T ss_pred             CCcchhCCHHHHHHHHHHhcC
Confidence            999999999999999998864

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=8.3e-13  Score=97.34  Aligned_cols=68  Identities=18%  Similarity=0.208  Sum_probs=60.5

Q ss_pred             cccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          101 YDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       101 ~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      ...+.++++|.|.+      |++.|.....|..    |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus        10 ~~~~~~~~~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           10 EWQQRERRRYKCDE------CGKSFSHSSDLSK----HRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCCCCSCSSBCSS------SCCBCSCHHHHHH----HHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCcCCCCCCEECCC------CCcccCCHHHHHH----HHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34567889999998      7899999999944    55689999999999999999999999999999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.32  E-value=1.4e-12  Score=90.10  Aligned_cols=56  Identities=21%  Similarity=0.450  Sum_probs=47.1

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccC
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICG  226 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cg  226 (348)
                      ||.|..|++.|.....|..|+++|                                            +++++|.|.+||
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h--------------------------------------------~~~~~~~C~~C~   36 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTH--------------------------------------------TDVRPYHCTYCN   36 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHT--------------------------------------------SSCCCEECSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhc--------------------------------------------CCCCCccCCCCC
Confidence            578888888888887777776555                                            556789999999


Q ss_pred             cccCChhHHHhHhhhcCCCC
Q 045639          227 AEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       227 k~F~~~~~L~~H~r~H~~~~  246 (348)
                      +.|.....|..|+++|.+++
T Consensus        37 ~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A           37 FSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CEESSHHHHHHHHHSSSSCC
T ss_pred             chhcCHHHHHHHHHHhcccC
Confidence            99999999999999998875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=5.1e-13  Score=98.64  Aligned_cols=70  Identities=16%  Similarity=0.189  Sum_probs=60.4

Q ss_pred             CCCccccC----CCccCCChHHHHhhhcccccCCCCCchhhccccc-cCCCCCceeccc--cCcccCChhHHHhHhhhcC
Q 045639          171 KKPKAMLM----NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFR-NGNSSKVHECSI--CGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       171 ~~~k~~~c----C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~-~H~~ekp~~C~~--Cgk~F~~~~~L~~H~r~H~  243 (348)
                      +++++|.|    |++.|.....                  |..|++ +|+++++|.|.+  |++.|.....|..|+++|+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~------------------L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~   64 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQY------------------LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS   64 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHH------------------HHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHH------------------HHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC
Confidence            45566665    8999998888                  455556 799999999999  9999999999999999999


Q ss_pred             CCCCCcccccccccC
Q 045639          244 SAPVAATAAAMATTN  258 (348)
Q Consensus       244 ~~~~~~~~~~~~~~~  258 (348)
                      ++++|.|..|+..|+
T Consensus        65 ~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           65 DTRDYICEFSGPSSG   79 (79)
T ss_dssp             TSCCCSCCSSSCCCC
T ss_pred             CCCCeeCCCCCCCCC
Confidence            999999999988763

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=6.7e-13  Score=99.45  Aligned_cols=75  Identities=13%  Similarity=0.199  Sum_probs=64.5

Q ss_pred             CccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCC----cccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639           99 AHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGC----YVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus        99 ~h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~----kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      .|+++|+++++|.|.+      |++.|.....|..|++    .|.++    ++|.|.+|++.|.....|..|+++|.+++
T Consensus         5 ~H~~~H~~~k~~~C~~------C~~~f~~~~~l~~H~~----~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   74 (86)
T 1x6h_A            5 SSGRTHTGEKPYACSH------CDKTFRQKQLLDMHFK----RYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             CCSTTCCCCCCEECSS------SSCEESSHHHHHHHHH----HTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             cccceecCCCCCcCCC------CCCccCCHHHHHHHHH----HhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCC
Confidence            5999999999999998      7899999999966543    33333    79999999999999999999999999999


Q ss_pred             cccC--CCccC
Q 045639          175 AMLM--NDDRL  183 (348)
Q Consensus       175 ~~~c--C~~~f  183 (348)
                      ++.|  |+..|
T Consensus        75 ~~~~~~~~~~~   85 (86)
T 1x6h_A           75 GVEGENSGPSS   85 (86)
T ss_dssp             SCCCCCCCCCC
T ss_pred             CcccCCCCCCC
Confidence            9988  66553

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.29  E-value=4.2e-13  Score=103.57  Aligned_cols=80  Identities=16%  Similarity=0.228  Sum_probs=68.7

Q ss_pred             CccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccC--CCCCccCCchhHhhhhhhcCCCccccC--CCc
Q 045639          106 QEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECK--TCNRTFPSFQALGGHRASHKKPKAMLM--NDD  181 (348)
Q Consensus       106 ~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~  181 (348)
                      .+++|.|..    ..|++.|.....|..    |++.|.++++|.|.  .|++.|.....|..|+++|.++++|.|  |++
T Consensus        12 ~~~~~~C~~----~~C~~~f~~~~~l~~----H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   83 (100)
T 2ebt_A           12 KRRIHYCDY----PGCTKVYTKSSHLKA----HLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNR   83 (100)
T ss_dssp             SCCCEECCS----SSCCCEESCHHHHHH----HHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCC
T ss_pred             cCcceEcCC----CCCCCcccCHHHHHH----HHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcC
Confidence            456788874    238899999999954    55578899999996  699999999999999999999999999  999


Q ss_pred             cCCChHHHHhhh
Q 045639          182 RLSLKSQHQQQQ  193 (348)
Q Consensus       182 ~f~~~~~L~~H~  193 (348)
                      .|.....|..|+
T Consensus        84 ~f~~~~~l~~H~   95 (100)
T 2ebt_A           84 SFSRSDHLALHM   95 (100)
T ss_dssp             BCSSHHHHHHHH
T ss_pred             ccCCHHHHHHHH
Confidence            999999966664

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=3.2e-13  Score=104.69  Aligned_cols=72  Identities=13%  Similarity=0.048  Sum_probs=63.6

Q ss_pred             CCCccccccCccccccccCCCCCCCCcccc-CcccccccccccccCCCC-CcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639           97 KPAHYDIHEQEEIAQLQINNNVNNSGMKFN-SRRFLEAPGTGTGTGKGG-CYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus        97 ~~~h~~~h~~e~~~~c~~~~~~~~c~~~f~-~~~~l~~~~~~h~~~h~g-~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      ...|+++|.++++|.|.+      |++.|. ....|..    |+++|++ +++|.|.+|++.|.....|..|+++|++++
T Consensus        12 ~~~h~~~h~~~~~~~C~~------C~k~f~~~~~~L~~----H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPT------CNVVTRKTLVGLKK----HMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTT------TCCCCSSCSHHHHH----HHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             HHHHHHHhccCCCcCCCC------CCCChhhhHHHHHH----HHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            345899999999999998      889999 9999854    5557888 999999999999999999999999999998


Q ss_pred             cccC
Q 045639          175 AMLM  178 (348)
Q Consensus       175 ~~~c  178 (348)
                      ++..
T Consensus        82 p~~~   85 (98)
T 2gqj_A           82 PSDA   85 (98)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            8654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.7e-13  Score=99.35  Aligned_cols=70  Identities=13%  Similarity=0.107  Sum_probs=61.6

Q ss_pred             CchhHhhhhhhcCCCccccC--CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccccCcccCChhHHH
Q 045639          159 SFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALG  236 (348)
Q Consensus       159 s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~  236 (348)
                      ....|..|+++|.++++|.|  |++.|.....                  |..       +++|.|.+||+.|.....|.
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~------------------l~~-------~~~~~C~~C~~~f~~~~~l~   56 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRST------------------LSR-------RKTPMCEKCRKDSCQEAALN   56 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCC------------------CCC-------SSSCCCHHHHHTCSCCCSSC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHH------------------hCc-------CCCCCCCCCChhhcCHHHHH
Confidence            35678999999999999999  9999887665                  332       78999999999999999999


Q ss_pred             hHhhhcCCCCCCccccc
Q 045639          237 GHMRRHRSAPVAATAAA  253 (348)
Q Consensus       237 ~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|+++++|.|..|
T Consensus        57 ~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           57 KDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSSCCCCCCCSSCCCC
T ss_pred             HHHHhhcCCCCCCCCCC
Confidence            99999999999998764

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.25  E-value=4.7e-12  Score=83.52  Aligned_cols=45  Identities=22%  Similarity=0.330  Sum_probs=42.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999765

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.25  E-value=1.9e-12  Score=97.65  Aligned_cols=79  Identities=15%  Similarity=0.235  Sum_probs=67.8

Q ss_pred             ccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccC--CCCCccCCchhHhhhhhhcCCCccccC--CCcc
Q 045639          107 EEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECK--TCNRTFPSFQALGGHRASHKKPKAMLM--NDDR  182 (348)
Q Consensus       107 e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~  182 (348)
                      ...|.|..    +.|++.|.....|.    .|++.|.++++|.|.  .|++.|.....|..|+++|.++++|.|  |++.
T Consensus         3 ~~~~~C~~----~~C~~~f~~~~~l~----~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (89)
T 2wbs_A            3 TATHTCDY----AGCGKTYTKSSHLK----AHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA   74 (89)
T ss_dssp             CCCEECCS----TTTCCEESSHHHHH----HHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CCCeeCCC----CCCCCcCCCHHHHH----HHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence            35677765    23889999999984    455688999999997  699999999999999999999999999  9999


Q ss_pred             CCChHHHHhhh
Q 045639          183 LSLKSQHQQQQ  193 (348)
Q Consensus       183 f~~~~~L~~H~  193 (348)
                      |.....|..|+
T Consensus        75 f~~~~~l~~H~   85 (89)
T 2wbs_A           75 FSRSDHLALHM   85 (89)
T ss_dssp             ESSHHHHHHHG
T ss_pred             cCCHHHHHHHH
Confidence            99999977664

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.2e-12  Score=83.40  Aligned_cols=45  Identities=22%  Similarity=0.389  Sum_probs=42.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.25  E-value=1e-12  Score=96.03  Aligned_cols=64  Identities=19%  Similarity=0.266  Sum_probs=57.2

Q ss_pred             cccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccc
Q 045639          103 IHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAM  176 (348)
Q Consensus       103 ~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~  176 (348)
                      .+.++++|.|..      |++.|..+..|..    |+++|+++++|+|.+|++.|.....|..|+++|+++++|
T Consensus        11 ~~~~~~~~~C~~------C~k~f~~~~~l~~----H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDR------CQASFRYKGNLAS----HKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTT------SSCCBSCHHHHHH----HHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCC------CCceeCCHHHHHH----HHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            346789999998      8899999999944    556889999999999999999999999999999999886

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=6.1e-12  Score=87.83  Aligned_cols=56  Identities=29%  Similarity=0.559  Sum_probs=45.7

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceecccc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSIC  225 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~C  225 (348)
                      ++|.|..|++.|.....|..|+++|                                            +++++|.|.+|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h--------------------------------------------~~~~~~~C~~C   36 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSH--------------------------------------------TNEKPYPCGLC   36 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT--------------------------------------------TSSCSEECTTT
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHh--------------------------------------------CCCCCccCCCC
Confidence            4788888888888887777776554                                            55678999999


Q ss_pred             CcccCChhHHHhHh-hhcCCC
Q 045639          226 GAEFTSGQALGGHM-RRHRSA  245 (348)
Q Consensus       226 gk~F~~~~~L~~H~-r~H~~~  245 (348)
                      ++.|.+...|..|+ ++|.++
T Consensus        37 ~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A           37 NRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCEESSHHHHHHHHTTTSCCS
T ss_pred             CCccCCHHHHHHHHHHHcCCc
Confidence            99999999999996 688765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5e-12  Score=83.47  Aligned_cols=45  Identities=29%  Similarity=0.513  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            689999999999999999999999999999999999999998764

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.8e-12  Score=83.55  Aligned_cols=45  Identities=29%  Similarity=0.468  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999764

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.8e-12  Score=83.55  Aligned_cols=45  Identities=22%  Similarity=0.347  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|+++++|.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999998764

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.24  E-value=5e-12  Score=83.54  Aligned_cols=45  Identities=24%  Similarity=0.409  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.24  E-value=1.4e-13  Score=104.26  Aligned_cols=77  Identities=18%  Similarity=0.228  Sum_probs=68.1

Q ss_pred             ccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCC
Q 045639          107 EEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLS  184 (348)
Q Consensus       107 e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~  184 (348)
                      |++|.|.+      |++.|.....|..    |+++|+++++|.|..|++.|.....|..|+++|.+ .+|.|  |++.|.
T Consensus         1 ek~~~C~~------C~k~f~~~~~L~~----H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~   69 (88)
T 1llm_C            1 MKPFQCRI------CMRNFSRSDHLTT----HIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLS   69 (88)
T ss_dssp             CCCEECTT------TCCEESCHHHHHH----HHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHH
T ss_pred             CCCCcCCC------CCCccCCHHHHHH----HHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHH
Confidence            57899988      8899999999954    55578999999999999999999999999999885 77888  999999


Q ss_pred             ChHHHHhhhc
Q 045639          185 LKSQHQQQQQ  194 (348)
Q Consensus       185 ~~~~L~~H~~  194 (348)
                      ....|..|++
T Consensus        70 ~~~~L~~H~~   79 (88)
T 1llm_C           70 KNYHLENEVA   79 (88)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHhhhHHHHH
Confidence            9999888864

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.23  E-value=4.6e-12  Score=83.65  Aligned_cols=45  Identities=20%  Similarity=0.414  Sum_probs=42.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.23  E-value=6.2e-12  Score=82.99  Aligned_cols=45  Identities=18%  Similarity=0.303  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            588999999999999999999999999999999999999999764

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.9e-12  Score=83.12  Aligned_cols=45  Identities=22%  Similarity=0.443  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999764

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.4e-12  Score=83.24  Aligned_cols=45  Identities=24%  Similarity=0.448  Sum_probs=42.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||+|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.9e-12  Score=83.10  Aligned_cols=45  Identities=20%  Similarity=0.355  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999765

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.1e-12  Score=82.96  Aligned_cols=45  Identities=22%  Similarity=0.426  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999764

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.6e-12  Score=82.79  Aligned_cols=45  Identities=27%  Similarity=0.442  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999764

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.4e-12  Score=83.02  Aligned_cols=45  Identities=24%  Similarity=0.451  Sum_probs=42.6

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999764

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.4e-12  Score=83.31  Aligned_cols=45  Identities=22%  Similarity=0.399  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999764

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.5e-12  Score=82.89  Aligned_cols=45  Identities=22%  Similarity=0.403  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.3e-12  Score=82.95  Aligned_cols=44  Identities=23%  Similarity=0.390  Sum_probs=42.1

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      +|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999875

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=6.7e-12  Score=82.77  Aligned_cols=45  Identities=27%  Similarity=0.433  Sum_probs=42.6

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999998754

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.7e-12  Score=82.78  Aligned_cols=45  Identities=22%  Similarity=0.352  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999998764

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.3e-12  Score=83.86  Aligned_cols=46  Identities=20%  Similarity=0.401  Sum_probs=43.0

Q ss_pred             ccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          208 DGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       208 ~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +.|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3689999999999999999999999999999999999999998764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=6.3e-12  Score=91.40  Aligned_cols=60  Identities=28%  Similarity=0.531  Sum_probs=51.2

Q ss_pred             cCCCCCcccccC--CCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCC
Q 045639          140 TGKGGCYVYECK--TCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSS  217 (348)
Q Consensus       140 ~~h~g~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~e  217 (348)
                      .+|.++++|.|.  .|++.|.....|..|+++|.                                            ++
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~--------------------------------------------~~   47 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHT--------------------------------------------GQ   47 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHH--------------------------------------------CC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhC--------------------------------------------CC
Confidence            467889999997  59999999988888877663                                            46


Q ss_pred             CceeccccCcccCChhHHHhHhhhcC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      ++|.|.+||+.|.....|..|+++|+
T Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           48 KPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHhcC
Confidence            77999999999999999999999885

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=1.3e-12  Score=101.07  Aligned_cols=53  Identities=13%  Similarity=0.049  Sum_probs=37.8

Q ss_pred             cccCCCCCcccccCCCCCcc-CCchhHhhhhhhcCCCccccC--CCccCCChHHHHh
Q 045639          138 TGTGKGGCYVYECKTCNRTF-PSFQALGGHRASHKKPKAMLM--NDDRLSLKSQHQQ  191 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F-~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~L~~  191 (348)
                      |.+.|.++++|.|.+|++.| .....|..|+++| ++++|.|  |++.|..+..|..
T Consensus        25 ~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~   80 (96)
T 2ctd_A           25 WYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKY   80 (96)
T ss_dssp             HHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHH
T ss_pred             HHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHH
Confidence            34455667777777777777 7777777777777 7777777  7777777776433

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.7e-12  Score=83.18  Aligned_cols=45  Identities=24%  Similarity=0.439  Sum_probs=42.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|+++++|.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.22  E-value=8.3e-12  Score=82.32  Aligned_cols=45  Identities=22%  Similarity=0.375  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999764

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=7.2e-12  Score=82.63  Aligned_cols=45  Identities=24%  Similarity=0.365  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999998764

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=7.1e-12  Score=82.79  Aligned_cols=45  Identities=29%  Similarity=0.503  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999998765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.2e-12  Score=82.34  Aligned_cols=45  Identities=22%  Similarity=0.375  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999998764

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.6e-12  Score=82.87  Aligned_cols=45  Identities=20%  Similarity=0.404  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5e-12  Score=83.46  Aligned_cols=45  Identities=20%  Similarity=0.322  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999764

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7.3e-12  Score=82.66  Aligned_cols=45  Identities=24%  Similarity=0.403  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7.2e-12  Score=82.60  Aligned_cols=45  Identities=22%  Similarity=0.436  Sum_probs=42.6

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999998764

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7.4e-12  Score=82.62  Aligned_cols=45  Identities=24%  Similarity=0.471  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|+++++|.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999764

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7e-12  Score=82.67  Aligned_cols=45  Identities=22%  Similarity=0.447  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=9.2e-12  Score=82.22  Aligned_cols=45  Identities=20%  Similarity=0.357  Sum_probs=42.5

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999764

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=6.9e-12  Score=81.94  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=41.7

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      |+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999998764

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.1e-12  Score=83.42  Aligned_cols=45  Identities=20%  Similarity=0.409  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999764

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.3e-12  Score=83.34  Aligned_cols=45  Identities=24%  Similarity=0.439  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999764

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1e-11  Score=81.98  Aligned_cols=45  Identities=20%  Similarity=0.339  Sum_probs=42.6

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|+++++|.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999764

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.21  E-value=8.2e-12  Score=82.46  Aligned_cols=45  Identities=22%  Similarity=0.417  Sum_probs=42.6

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999764

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=9.3e-12  Score=82.13  Aligned_cols=45  Identities=22%  Similarity=0.420  Sum_probs=42.5

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            488999999999999999999999999999999999999999764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=1.8e-12  Score=94.27  Aligned_cols=65  Identities=22%  Similarity=0.297  Sum_probs=58.2

Q ss_pred             ccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          100 HYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       100 h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +.++|+++++|.|.+      |++.|.....|..    |+++|+++++|.|.+|++.|.....|..|+++|+++.
T Consensus         5 ~~~~H~~~k~~~C~~------C~k~f~~~~~L~~----H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVE------CGKAFSRSSILVQ----HQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSS------SCCEESSHHHHHH----HHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCC------CCCccCCHHHHHH----HHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            577899999999998      7899999999954    5568899999999999999999999999999998764

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=81.83  Aligned_cols=45  Identities=29%  Similarity=0.419  Sum_probs=42.5

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|+++++|.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999764

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.20  E-value=1.1e-11  Score=80.09  Aligned_cols=42  Identities=24%  Similarity=0.409  Sum_probs=39.9

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      |+++|+++++|.|.+||+.|.+...|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678999999999999999999999999999999999999874

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=81.59  Aligned_cols=44  Identities=23%  Similarity=0.450  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      +|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998864

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=9.5e-12  Score=82.08  Aligned_cols=45  Identities=22%  Similarity=0.330  Sum_probs=42.5

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999764

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.4e-11  Score=81.32  Aligned_cols=44  Identities=25%  Similarity=0.477  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      +|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.1e-11  Score=81.81  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||+|.+||+.|.+...|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.1e-11  Score=79.97  Aligned_cols=42  Identities=24%  Similarity=0.426  Sum_probs=39.9

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAAT  250 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~  250 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8e-12  Score=82.46  Aligned_cols=45  Identities=22%  Similarity=0.447  Sum_probs=42.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999764

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.2e-11  Score=81.58  Aligned_cols=44  Identities=23%  Similarity=0.366  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.1e-11  Score=81.73  Aligned_cols=45  Identities=20%  Similarity=0.393  Sum_probs=42.5

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999998764

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.5e-12  Score=82.10  Aligned_cols=45  Identities=20%  Similarity=0.367  Sum_probs=42.6

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999998764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.3e-11  Score=79.65  Aligned_cols=42  Identities=17%  Similarity=0.314  Sum_probs=39.8

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      |+++|++++||.|.+||+.|.+...|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            678999999999999999999999999999999999999874

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.19  E-value=1.3e-11  Score=81.43  Aligned_cols=45  Identities=20%  Similarity=0.300  Sum_probs=42.5

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999999999999999999998764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.3e-11  Score=81.41  Aligned_cols=44  Identities=27%  Similarity=0.474  Sum_probs=41.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998863

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.4e-11  Score=81.33  Aligned_cols=44  Identities=20%  Similarity=0.371  Sum_probs=41.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998863

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.18  E-value=1.2e-11  Score=81.73  Aligned_cols=44  Identities=25%  Similarity=0.476  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.3e-11  Score=81.42  Aligned_cols=44  Identities=20%  Similarity=0.398  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.5e-11  Score=81.11  Aligned_cols=44  Identities=23%  Similarity=0.389  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            68899999999999999999999999999999999999998864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.5e-11  Score=81.14  Aligned_cols=44  Identities=23%  Similarity=0.328  Sum_probs=41.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=81.79  Aligned_cols=44  Identities=23%  Similarity=0.412  Sum_probs=41.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||+|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.4e-11  Score=81.25  Aligned_cols=44  Identities=23%  Similarity=0.395  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.1e-11  Score=80.83  Aligned_cols=43  Identities=21%  Similarity=0.409  Sum_probs=40.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999999999999999999999999999873

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.5e-11  Score=81.08  Aligned_cols=44  Identities=25%  Similarity=0.393  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+|++.|.+...|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.3e-11  Score=81.39  Aligned_cols=44  Identities=23%  Similarity=0.454  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.6e-11  Score=80.92  Aligned_cols=44  Identities=27%  Similarity=0.414  Sum_probs=41.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      +|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.5e-11  Score=80.13  Aligned_cols=43  Identities=26%  Similarity=0.351  Sum_probs=40.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5889999999999999999999999999999999999999873

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.5e-11  Score=81.17  Aligned_cols=44  Identities=23%  Similarity=0.474  Sum_probs=41.9

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=4.7e-12  Score=91.44  Aligned_cols=65  Identities=9%  Similarity=0.013  Sum_probs=57.8

Q ss_pred             cccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCcccc
Q 045639          103 IHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAML  177 (348)
Q Consensus       103 ~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~  177 (348)
                      +|+++++|.|.+      |++.|.....|..    |+++|+++++|.|.+|++.|.....|..|+++|.++++..
T Consensus         3 s~~~~~~~~C~~------C~k~f~~~~~L~~----H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSE------CSYSCSSKAALRI----HERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSS------SSCEESSHHHHHH----HHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCC------CCcccCCHHHHHH----HHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            467899999998      8899999999944    5568999999999999999999999999999999988754

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.4e-11  Score=81.28  Aligned_cols=43  Identities=26%  Similarity=0.403  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999999999886

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=80.89  Aligned_cols=44  Identities=23%  Similarity=0.411  Sum_probs=41.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998863

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=80.07  Aligned_cols=43  Identities=23%  Similarity=0.376  Sum_probs=40.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999873

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.1e-11  Score=81.86  Aligned_cols=45  Identities=20%  Similarity=0.369  Sum_probs=42.5

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999765

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.8e-11  Score=79.94  Aligned_cols=43  Identities=23%  Similarity=0.352  Sum_probs=40.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            6889999999999999999999999999999999999998873

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.1e-11  Score=79.58  Aligned_cols=43  Identities=26%  Similarity=0.393  Sum_probs=40.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            6889999999999999999999999999999999999999873

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.9e-11  Score=80.63  Aligned_cols=44  Identities=25%  Similarity=0.502  Sum_probs=41.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.9e-11  Score=80.72  Aligned_cols=44  Identities=23%  Similarity=0.420  Sum_probs=41.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.4e-11  Score=81.38  Aligned_cols=44  Identities=23%  Similarity=0.517  Sum_probs=41.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      +|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.9e-11  Score=78.93  Aligned_cols=41  Identities=27%  Similarity=0.471  Sum_probs=39.3

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAAT  250 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~  250 (348)
                      |+++|++++||.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            78999999999999999999999999999999999999876

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.2e-11  Score=79.67  Aligned_cols=42  Identities=26%  Similarity=0.372  Sum_probs=40.1

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAAT  250 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~  250 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            588999999999999999999999999999999999998876

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.1e-11  Score=80.42  Aligned_cols=43  Identities=23%  Similarity=0.347  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999999886

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.1e-11  Score=80.50  Aligned_cols=44  Identities=20%  Similarity=0.400  Sum_probs=41.5

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+|++.|.+...|..|+++|+++++|.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999864

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.5e-11  Score=80.30  Aligned_cols=45  Identities=24%  Similarity=0.406  Sum_probs=42.4

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhh-hcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMR-RHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~~  253 (348)
                      .|+++|++++||.|.+||+.|.....|..|++ +|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            58899999999999999999999999999999 9999999998764

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.4e-11  Score=81.14  Aligned_cols=44  Identities=23%  Similarity=0.416  Sum_probs=41.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999864

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.15  E-value=2.8e-11  Score=92.40  Aligned_cols=71  Identities=23%  Similarity=0.303  Sum_probs=58.8

Q ss_pred             CcccccCCCCCccCCchhHhhhhhh-cCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceecc
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRAS-HKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECS  223 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~-H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~  223 (348)
                      ...|.|..|++.|.....|..|+++ |.++++..+                 +                   .-++|.|.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~-----------------~-------------------~c~~~~C~   66 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN-----------------H-------------------VCYWEECP   66 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSC-----------------C-------------------CCCCTTCS
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCc-----------------c-------------------ceeccCCC
Confidence            3568899999999999999999997 877655321                 0                   01348999


Q ss_pred             ccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          224 ICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       224 ~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      +||+.|.....|..|+++|+++++|.|.
T Consensus        67 ~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           67 REGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             STTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            9999999999999999999999999875

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.15  E-value=2.3e-11  Score=78.40  Aligned_cols=41  Identities=20%  Similarity=0.307  Sum_probs=39.3

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAAT  250 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~  250 (348)
                      |+++|++++||.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            78899999999999999999999999999999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.7e-11  Score=80.88  Aligned_cols=45  Identities=20%  Similarity=0.375  Sum_probs=42.4

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478999999999999999999999999999999999999998764

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.6e-11  Score=79.20  Aligned_cols=42  Identities=24%  Similarity=0.420  Sum_probs=39.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAAT  250 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~  250 (348)
                      .|+++|++++||.|.+||+.|.+...|..|+++|+++++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            1 GSSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            378999999999999999999999999999999999999876

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.4e-11  Score=79.41  Aligned_cols=44  Identities=23%  Similarity=0.437  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47899999999999999999999999999999999999998863

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.9e-11  Score=79.83  Aligned_cols=43  Identities=26%  Similarity=0.383  Sum_probs=40.8

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999873

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.7e-11  Score=79.80  Aligned_cols=44  Identities=23%  Similarity=0.413  Sum_probs=41.6

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998863

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.12  E-value=1.8e-11  Score=83.91  Aligned_cols=49  Identities=16%  Similarity=0.220  Sum_probs=44.5

Q ss_pred             CCCCchhhccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCC
Q 045639          200 SKSDDEEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVA  248 (348)
Q Consensus       200 ~f~~~~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  248 (348)
                      .|.....|..|+++|++++||.|.+||+.|.....|..|+++|+++++|
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            3455566899999999999999999999999999999999999999876

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.7e-11  Score=79.24  Aligned_cols=43  Identities=21%  Similarity=0.414  Sum_probs=40.9

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCC-CCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRS-APVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~-~~~~~~~  251 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|++ +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            588999999999999999999999999999999999 9999885

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.8e-11  Score=80.70  Aligned_cols=43  Identities=23%  Similarity=0.444  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999999999999999999999999999999885

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=80.50  Aligned_cols=44  Identities=23%  Similarity=0.515  Sum_probs=41.6

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      .|+++|++++||.|.+|++.|.+...|..|+++|+++++|.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998863

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.11  E-value=1.5e-11  Score=93.04  Aligned_cols=64  Identities=22%  Similarity=0.258  Sum_probs=55.3

Q ss_pred             cccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhh-hhcCCCc
Q 045639          101 YDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHR-ASHKKPK  174 (348)
Q Consensus       101 ~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~-~~H~~~k  174 (348)
                      +.++..+++|.|.+      |++.|..+..|    ..|+++|++++||.|.+|++.|.....|..|+ ++|.++.
T Consensus        20 ~~~~~~~~~h~C~~------Cgk~F~~~~~L----~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           20 LGLSASAECHLCPV------CGESFASKGAQ----ERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSSCCCCTTEECTT------SCCEESSHHHH----HHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCEECCC------CCCCcCcHHHH----hhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34567788999988      88999999999    45566899999999999999999999999996 6798764

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.6e-11  Score=85.28  Aligned_cols=60  Identities=20%  Similarity=0.482  Sum_probs=50.3

Q ss_pred             CCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCcee
Q 045639          142 KGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHE  221 (348)
Q Consensus       142 h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~  221 (348)
                      ..++++|.|..|++.|. ...|..|+++                                             ++++||.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~---------------------------------------------~~~~p~~   38 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ---------------------------------------------CPRLPVA   38 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH---------------------------------------------CSSSEEE
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH---------------------------------------------cCCcCcc
Confidence            45678999999999998 8888777653                                             4578899


Q ss_pred             cc-ccCcccCChhHHHhHhhhcCCCCC
Q 045639          222 CS-ICGAEFTSGQALGGHMRRHRSAPV  247 (348)
Q Consensus       222 C~-~Cgk~F~~~~~L~~H~r~H~~~~~  247 (348)
                      |. +||+.|.....|..|+++|-+.++
T Consensus        39 C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           39 CPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCcccCcccccHHHHHHHHHhhcccCc
Confidence            99 999999999999999999987653

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.7e-11  Score=77.54  Aligned_cols=43  Identities=21%  Similarity=0.350  Sum_probs=40.4

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4789999999999999999999999999999999999999873

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=2.1e-11  Score=89.71  Aligned_cols=68  Identities=13%  Similarity=0.167  Sum_probs=57.0

Q ss_pred             CccccccCccccccccCCCCCCCCccccCcccccccccccccCCCCC-cccccCCCCCccCCchhHhhhhhhc-CCCcc
Q 045639           99 AHYDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGC-YVYECKTCNRTFPSFQALGGHRASH-KKPKA  175 (348)
Q Consensus        99 ~h~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~-kpy~C~~Cgk~F~s~~~L~~H~~~H-~~~k~  175 (348)
                      .|+++|+++++|.|.+      |++.|.....|..|++   ..|.++ ++|.|.+|++.|.....|..|+++| .++.|
T Consensus         5 ~H~~~H~~~k~~~C~~------C~k~f~~~~~L~~H~~---~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYI------CHARFTQSGTMKMHIL---QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCSCCCSEECTT------TCCEESCHHHHHHHHH---HHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             ccccccCCCCCeECCC------cCchhCCHHHHHHHHH---HhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            5999999999999998      8899999999955532   256764 8999999999999999999999975 44444

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=1.1e-11  Score=88.23  Aligned_cols=62  Identities=15%  Similarity=0.154  Sum_probs=53.9

Q ss_pred             cccccCccccccccCCCCCCCCccccCcccccccccccccC-C-CCCcccccCCCCCccCCchhHhhhhhhcCC
Q 045639          101 YDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTG-K-GGCYVYECKTCNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       101 ~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~-h-~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      +++|+++++|.|..      |++.|.....|..|    .+. | +++++|.|..|++.|.....|..|+++|.+
T Consensus         2 ~~~h~~~k~~~C~~------C~k~f~~~~~l~~H----~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKV------CSRVYTHISNFCRH----YVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTT------TCCEESSHHHHHHH----HHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCC------CcchhCCHHHHHHH----HHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            46799999999998      88999999999555    445 6 689999999999999999999999998865

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.2e-11  Score=77.47  Aligned_cols=44  Identities=23%  Similarity=0.436  Sum_probs=41.2

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      ++++|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46889999999999999999999999999999999999998764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.06  E-value=1.5e-11  Score=91.56  Aligned_cols=74  Identities=15%  Similarity=0.131  Sum_probs=62.1

Q ss_pred             cccc--ccCCCCCCCCccccCcccccccccccccCCCCCcccccCC--CCCccCCchhHhhhhhhcCCCccccC---CCc
Q 045639          109 IAQL--QINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKT--CNRTFPSFQALGGHRASHKKPKAMLM---NDD  181 (348)
Q Consensus       109 ~~~c--~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~k~~~c---C~~  181 (348)
                      ||.|  .+      |++.|.....|..    |+++|+++++|.|..  |++.|.....|..|+++|++ ..+.-   |++
T Consensus         1 p~~C~~~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~   69 (85)
T 2j7j_A            1 MYVCHFEN------CGKAFKKHNQLKV----HQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSF   69 (85)
T ss_dssp             CEECCSTT------CCCEESSHHHHHH----HHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCC
T ss_pred             CccCCCCC------CCcccCCHHHHHH----HHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCC
Confidence            4667  55      8899999999954    455788999999998  99999999999999999998 44444   999


Q ss_pred             cCCChHHHHhhh
Q 045639          182 RLSLKSQHQQQQ  193 (348)
Q Consensus       182 ~f~~~~~L~~H~  193 (348)
                      .|.....|..|+
T Consensus        70 ~f~~~~~l~~H~   81 (85)
T 2j7j_A           70 VGKTWTLYLKHV   81 (85)
T ss_dssp             EESSHHHHHHHH
T ss_pred             ccCCHHHHHHHH
Confidence            999999877765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.1e-10  Score=77.04  Aligned_cols=43  Identities=23%  Similarity=0.400  Sum_probs=40.2

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAA  252 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~  252 (348)
                      ++++|+++++|.|.+|++.|.....|..|+++|+++++|.|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4688999999999999999999999999999999999999863

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.5e-11  Score=77.08  Aligned_cols=42  Identities=26%  Similarity=0.462  Sum_probs=39.7

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      +.++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            567899999999999999999999999999999999999885

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.3e-10  Score=74.80  Aligned_cols=41  Identities=22%  Similarity=0.353  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+|+++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.5e-10  Score=76.24  Aligned_cols=41  Identities=27%  Similarity=0.487  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.05  E-value=1.4e-10  Score=76.31  Aligned_cols=41  Identities=22%  Similarity=0.385  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCS
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCC
Confidence            66789999999999999999999999999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.3e-10  Score=76.46  Aligned_cols=42  Identities=29%  Similarity=0.476  Sum_probs=39.3

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+|+++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCS
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.04  E-value=1.3e-10  Score=76.53  Aligned_cols=42  Identities=29%  Similarity=0.460  Sum_probs=39.3

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.04  E-value=1.4e-10  Score=76.34  Aligned_cols=41  Identities=29%  Similarity=0.418  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=76.18  Aligned_cols=41  Identities=27%  Similarity=0.470  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.7e-10  Score=75.91  Aligned_cols=42  Identities=21%  Similarity=0.401  Sum_probs=39.3

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP   43 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.6e-10  Score=75.95  Aligned_cols=41  Identities=22%  Similarity=0.321  Sum_probs=38.6

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.5e-10  Score=76.18  Aligned_cols=41  Identities=24%  Similarity=0.441  Sum_probs=38.5

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.03  E-value=1.9e-10  Score=83.18  Aligned_cols=58  Identities=26%  Similarity=0.488  Sum_probs=47.7

Q ss_pred             CCCCCcccccCC--CCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCC
Q 045639          141 GKGGCYVYECKT--CNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSK  218 (348)
Q Consensus       141 ~h~g~kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ek  218 (348)
                      .+.+.++|.|..  |++.|.....|..|+++|.                                            +++
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~--------------------------------------------~~~   46 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT--------------------------------------------GEK   46 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHS--------------------------------------------SSC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcC--------------------------------------------CCC
Confidence            456678999988  9999999888888877664                                            456


Q ss_pred             ceeccc--cCcccCChhHHHhHhhhc
Q 045639          219 VHECSI--CGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       219 p~~C~~--Cgk~F~~~~~L~~H~r~H  242 (348)
                      ||.|.+  |++.|.....|..|+++|
T Consensus        47 ~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           47 PFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             SEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccCCCCCCCcccCCHHHHHhHhhcC
Confidence            788865  999999999999998876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.8e-10  Score=75.78  Aligned_cols=41  Identities=24%  Similarity=0.468  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCS
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.9e-10  Score=75.73  Aligned_cols=41  Identities=20%  Similarity=0.313  Sum_probs=38.6

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP   43 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCS
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            56789999999999999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.02  E-value=1.5e-10  Score=76.23  Aligned_cols=41  Identities=24%  Similarity=0.454  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP   43 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSS
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.02  E-value=1.9e-10  Score=75.79  Aligned_cols=41  Identities=24%  Similarity=0.396  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.5e-10  Score=76.17  Aligned_cols=41  Identities=22%  Similarity=0.321  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSS
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.5e-10  Score=76.13  Aligned_cols=41  Identities=24%  Similarity=0.427  Sum_probs=38.5

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.7e-10  Score=75.87  Aligned_cols=42  Identities=21%  Similarity=0.282  Sum_probs=39.2

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.6e-10  Score=76.04  Aligned_cols=41  Identities=24%  Similarity=0.451  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP   43 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSS
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2e-10  Score=75.69  Aligned_cols=41  Identities=27%  Similarity=0.384  Sum_probs=38.5

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP   43 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCC
Confidence            56789999999999999999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.9e-10  Score=75.61  Aligned_cols=42  Identities=21%  Similarity=0.387  Sum_probs=39.3

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+++++|.|.+||+.|.....|..|+++|.++++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.8e-10  Score=75.85  Aligned_cols=42  Identities=19%  Similarity=0.375  Sum_probs=38.6

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2e-10  Score=75.56  Aligned_cols=41  Identities=24%  Similarity=0.471  Sum_probs=38.5

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSS
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.7e-10  Score=75.88  Aligned_cols=42  Identities=26%  Similarity=0.437  Sum_probs=39.2

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP   43 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.9e-10  Score=73.68  Aligned_cols=39  Identities=26%  Similarity=0.448  Sum_probs=37.2

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcc
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAAT  250 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~  250 (348)
                      ++|++++||.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            679999999999999999999999999999999999876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.4e-11  Score=77.49  Aligned_cols=44  Identities=23%  Similarity=0.404  Sum_probs=41.0

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .+++|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45889999999999999999999999999999999999999764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.1e-10  Score=73.84  Aligned_cols=41  Identities=24%  Similarity=0.413  Sum_probs=38.2

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45689999999999999999999999999999999999986

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.5e-10  Score=76.25  Aligned_cols=41  Identities=27%  Similarity=0.459  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCS
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=76.78  Aligned_cols=42  Identities=24%  Similarity=0.409  Sum_probs=39.4

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+|+++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.02  E-value=1.8e-10  Score=74.16  Aligned_cols=41  Identities=24%  Similarity=0.462  Sum_probs=38.3

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            45689999999999999999999999999999999999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=3.1e-11  Score=88.92  Aligned_cols=65  Identities=17%  Similarity=0.239  Sum_probs=55.7

Q ss_pred             cccCccccccccCCCCCCCCccccCcccccccccccccCCCC---CcccccCCCCCccCCchhHhhhh-hhcCCCcccc
Q 045639          103 IHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGG---CYVYECKTCNRTFPSFQALGGHR-ASHKKPKAML  177 (348)
Q Consensus       103 ~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g---~kpy~C~~Cgk~F~s~~~L~~H~-~~H~~~k~~~  177 (348)
                      +|+++++|.|.+      |++.|.....|..|    +++|++   +++|.|.+|++.|.....|..|+ +.|.++++..
T Consensus         1 ~h~~~k~~~C~~------C~k~f~~~~~L~~H----~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            1 GSSGSSGLQCEI------CGFTCRQKASLNWH----QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCCSCCCEECSS------SCCEESSHHHHHHH----HHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCCcCeECCC------CCCeeCCHHHHHHH----HHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            478999999998      88999999999554    457775   89999999999999999999999 5688777654

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.4e-10  Score=75.20  Aligned_cols=41  Identities=24%  Similarity=0.487  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.01  E-value=2.5e-11  Score=83.68  Aligned_cols=57  Identities=21%  Similarity=0.283  Sum_probs=47.0

Q ss_pred             CccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCC
Q 045639          106 QEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       106 ~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      |+++|.|.+      |++.|.....|..    |+++|+++++|.|.+|++.|.....|..|+++|.+
T Consensus         1 g~~~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSY------CGKFFRSNYYLNI----HLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTT------TCCBCSCHHHHHH----HHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCC------CcchhCChHHHHH----HHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467899988      8899999999944    55688999999999999999999999999998863

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.01  E-value=2e-10  Score=75.51  Aligned_cols=41  Identities=27%  Similarity=0.426  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP   43 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCST
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2e-10  Score=75.53  Aligned_cols=41  Identities=24%  Similarity=0.397  Sum_probs=38.5

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSST
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56789999999999999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.7e-10  Score=75.80  Aligned_cols=41  Identities=24%  Similarity=0.351  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP   43 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.8e-10  Score=75.81  Aligned_cols=41  Identities=24%  Similarity=0.433  Sum_probs=38.6

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP   43 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.9e-10  Score=75.69  Aligned_cols=42  Identities=26%  Similarity=0.392  Sum_probs=39.3

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.01  E-value=5.2e-12  Score=102.33  Aligned_cols=80  Identities=10%  Similarity=0.098  Sum_probs=57.5

Q ss_pred             ccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCC
Q 045639          107 EEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLS  184 (348)
Q Consensus       107 e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~  184 (348)
                      ++.+.|++|.....+...|.....|..    |. .|+|+++|.|.+||+.|.....|..|+++|  +++|.|  |++.|.
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~----h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~  111 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYR----LL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFT  111 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHH----HH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCS
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHH----HH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccC
Confidence            345666663322122233444444433    33 588899999999999999999999999999  788888  999999


Q ss_pred             ChHHHHhhh
Q 045639          185 LKSQHQQQQ  193 (348)
Q Consensus       185 ~~~~L~~H~  193 (348)
                      ....|..|+
T Consensus       112 ~~~~l~~H~  120 (129)
T 2wbt_A          112 STDSALDHV  120 (129)
T ss_dssp             SHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            999855554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.01  E-value=5.6e-11  Score=81.85  Aligned_cols=56  Identities=20%  Similarity=0.275  Sum_probs=49.4

Q ss_pred             ccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          109 IAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       109 ~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      ||.|.+      |++.|.....|.    .|+++|+++++|.|..|++.|.....|..|+++|.+++
T Consensus         1 p~~C~~------C~~~f~~~~~l~----~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEE------CGIRXKKPSMLK----KHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTT------TCCBCSSHHHHH----HHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCC------CcCcCCCHHHHH----HHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            477776      889999999994    45568999999999999999999999999999998875

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.4e-10  Score=73.68  Aligned_cols=41  Identities=24%  Similarity=0.424  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |.++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56789999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.01  E-value=2.1e-10  Score=75.53  Aligned_cols=41  Identities=24%  Similarity=0.470  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP   43 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            56789999999999999999999999999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=1.6e-10  Score=75.71  Aligned_cols=43  Identities=19%  Similarity=0.404  Sum_probs=40.5

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccccc
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAM  254 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~  254 (348)
                      .+|++++||.|.+|++.|.....|..|+++|+++++|.|..|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5789999999999999999999999999999999999998874

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.9e-10  Score=75.74  Aligned_cols=41  Identities=22%  Similarity=0.347  Sum_probs=38.6

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.7e-10  Score=75.22  Aligned_cols=41  Identities=24%  Similarity=0.405  Sum_probs=38.2

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+|+++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP   41 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            45688999999999999999999999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=76.33  Aligned_cols=42  Identities=24%  Similarity=0.511  Sum_probs=39.3

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.3e-10  Score=75.25  Aligned_cols=41  Identities=27%  Similarity=0.455  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=75.73  Aligned_cols=41  Identities=24%  Similarity=0.473  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |.++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCS
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.8e-10  Score=75.82  Aligned_cols=41  Identities=24%  Similarity=0.436  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.3e-10  Score=74.34  Aligned_cols=41  Identities=24%  Similarity=0.382  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.3e-10  Score=75.22  Aligned_cols=41  Identities=24%  Similarity=0.368  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSS
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=76.25  Aligned_cols=41  Identities=27%  Similarity=0.474  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP   43 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCS
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=76.19  Aligned_cols=41  Identities=24%  Similarity=0.387  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSS
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.7e-10  Score=74.97  Aligned_cols=41  Identities=20%  Similarity=0.323  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.2e-10  Score=75.47  Aligned_cols=41  Identities=27%  Similarity=0.417  Sum_probs=39.1

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.8e-10  Score=74.80  Aligned_cols=41  Identities=24%  Similarity=0.404  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.6e-10  Score=75.00  Aligned_cols=41  Identities=27%  Similarity=0.485  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3e-10  Score=74.75  Aligned_cols=42  Identities=21%  Similarity=0.442  Sum_probs=39.3

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.5e-10  Score=75.09  Aligned_cols=41  Identities=27%  Similarity=0.458  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.3e-10  Score=75.30  Aligned_cols=42  Identities=24%  Similarity=0.393  Sum_probs=39.2

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+++++|.|..||+.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            366789999999999999999999999999999999999987

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.4e-10  Score=74.42  Aligned_cols=41  Identities=22%  Similarity=0.474  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.2e-10  Score=75.38  Aligned_cols=41  Identities=22%  Similarity=0.450  Sum_probs=38.6

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.9e-10  Score=74.87  Aligned_cols=41  Identities=24%  Similarity=0.442  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.1e-10  Score=75.57  Aligned_cols=41  Identities=32%  Similarity=0.487  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.6e-10  Score=75.02  Aligned_cols=41  Identities=22%  Similarity=0.387  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP   43 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSS
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCC
Confidence            56789999999999999999999999999999999999988

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.9e-10  Score=74.84  Aligned_cols=41  Identities=29%  Similarity=0.542  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56789999999999999999999999999999999999987

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.99  E-value=2.1e-10  Score=75.51  Aligned_cols=41  Identities=24%  Similarity=0.443  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.8e-10  Score=74.85  Aligned_cols=41  Identities=24%  Similarity=0.475  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.8e-10  Score=74.76  Aligned_cols=41  Identities=27%  Similarity=0.433  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            66789999999999999999999999999999999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=74.32  Aligned_cols=41  Identities=24%  Similarity=0.404  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |.++|+|+++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56789999999999999999999999999999999999987

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.3e-10  Score=75.17  Aligned_cols=41  Identities=27%  Similarity=0.492  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2.5e-10  Score=75.07  Aligned_cols=41  Identities=20%  Similarity=0.309  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGP   43 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCT
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.7e-10  Score=74.33  Aligned_cols=41  Identities=27%  Similarity=0.502  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55689999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.3e-10  Score=75.44  Aligned_cols=41  Identities=20%  Similarity=0.380  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |.++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP   43 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            56789999999999999999999999999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2e-10  Score=75.60  Aligned_cols=41  Identities=27%  Similarity=0.506  Sum_probs=38.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSS
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.3e-10  Score=74.60  Aligned_cols=41  Identities=22%  Similarity=0.425  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            56689999999999999999999999999999999999988

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.98  E-value=2.7e-10  Score=73.29  Aligned_cols=41  Identities=22%  Similarity=0.381  Sum_probs=38.6

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |.++|+++++|.|.+||+.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56689999999999999999999999999999999999987

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.5e-10  Score=75.14  Aligned_cols=42  Identities=24%  Similarity=0.428  Sum_probs=39.5

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            366789999999999999999999999999999999999988

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.5e-10  Score=74.30  Aligned_cols=41  Identities=24%  Similarity=0.461  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.3e-10  Score=75.29  Aligned_cols=41  Identities=22%  Similarity=0.400  Sum_probs=38.4

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |.++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP   43 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.7e-10  Score=74.02  Aligned_cols=42  Identities=24%  Similarity=0.445  Sum_probs=39.2

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      .|+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            366789999999999999999999999999999999999987

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=2.1e-10  Score=87.26  Aligned_cols=50  Identities=18%  Similarity=0.151  Sum_probs=42.0

Q ss_pred             cccccccc-ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          129 RFLEAPGT-GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       129 ~~l~~~~~-~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +.|..+.. .+.++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         6 ~~lkr~~~~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A            6 SGLKRDFIILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             CCCCCCCCCCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             hhhccceeeccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            33444432 456689999999999999999999999999999999999887

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.8e-10  Score=74.82  Aligned_cols=41  Identities=24%  Similarity=0.422  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.6e-10  Score=74.98  Aligned_cols=41  Identities=29%  Similarity=0.523  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.3e-10  Score=73.75  Aligned_cols=42  Identities=24%  Similarity=0.363  Sum_probs=39.2

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            366789999999999999999999999999999999999987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.97  E-value=3.1e-10  Score=73.66  Aligned_cols=40  Identities=15%  Similarity=0.330  Sum_probs=38.1

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      ++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            6789999999999999999999999999999999999885

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.2e-10  Score=74.61  Aligned_cols=41  Identities=24%  Similarity=0.482  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3e-10  Score=74.61  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.9e-10  Score=74.37  Aligned_cols=41  Identities=27%  Similarity=0.379  Sum_probs=38.4

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhh-hcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRA-SHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~-~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+||+.|.....|..|++ +|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCC
Confidence            5668999999999999999999999999999 9999999988

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.3e-10  Score=75.38  Aligned_cols=41  Identities=22%  Similarity=0.373  Sum_probs=39.1

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.1e-10  Score=74.59  Aligned_cols=45  Identities=22%  Similarity=0.440  Sum_probs=41.6

Q ss_pred             cccccCCCCCceecc--ccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          209 GNFRNGNSSKVHECS--ICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      .|.++|+++++|.|.  +||+.|.....|..|+++|+++++|.|..|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367899999999998  899999999999999999999999998764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.96  E-value=4.2e-10  Score=70.24  Aligned_cols=37  Identities=27%  Similarity=0.497  Sum_probs=34.7

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      .|+++|++++||+|.+||+.|.....|..|+++|+++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            3789999999999999999999999999999999874

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.96  E-value=7.9e-11  Score=85.45  Aligned_cols=63  Identities=16%  Similarity=0.237  Sum_probs=54.0

Q ss_pred             cccccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcC
Q 045639          101 YDIHEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       101 ~~~h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      ..+|.++++|.|..    ..|++.|.....|..    |+++|.++++|.|.+||+.|.....|..|+++|+
T Consensus        11 ~~~~~~~~~~~C~~----~~C~k~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           11 NYVVPKMRPYACPV----ESCDRRFSRSDELTR----HIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             SCCCCCCCCEECSS----TTBCCEESSHHHHHH----HHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             hccCCCCCccCCcC----CCCCCccCCHHHHHH----HHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45688999999962    128899999999944    5568899999999999999999999999999984

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.8e-10  Score=74.15  Aligned_cols=41  Identities=29%  Similarity=0.493  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|..|++.|.....|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.9e-10  Score=74.05  Aligned_cols=41  Identities=20%  Similarity=0.453  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999986

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.1e-10  Score=74.69  Aligned_cols=41  Identities=22%  Similarity=0.355  Sum_probs=38.6

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP   43 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCS
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCC
Confidence            56689999999999999999999999999999999999988

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.7e-10  Score=73.14  Aligned_cols=41  Identities=24%  Similarity=0.371  Sum_probs=38.5

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            66789999999999999999999999999999999999875

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=5.6e-10  Score=76.34  Aligned_cols=45  Identities=20%  Similarity=0.265  Sum_probs=41.5

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhh-hcCCCccccC--CCccCCC
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRA-SHKKPKAMLM--NDDRLSL  185 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~-~H~~~k~~~c--C~~~f~~  185 (348)
                      .|+++++|.|.+|++.|.....|..|++ +|.++++|.|  |++.|..
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            6788999999999999999999999987 8999999999  9999875

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=4.7e-10  Score=73.07  Aligned_cols=41  Identities=22%  Similarity=0.336  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            56789999999999999999999999999999999999987

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.7e-10  Score=70.49  Aligned_cols=37  Identities=16%  Similarity=0.473  Sum_probs=34.5

Q ss_pred             cccCCCCCceeccccCcccCChhHHHhHhhhcCCCCC
Q 045639          211 FRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPV  247 (348)
Q Consensus       211 ~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  247 (348)
                      +++|++++||.|.+||+.|.....|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999999874

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=74.55  Aligned_cols=41  Identities=24%  Similarity=0.414  Sum_probs=39.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.3e-10  Score=73.99  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.94  E-value=2.4e-10  Score=80.70  Aligned_cols=55  Identities=13%  Similarity=0.146  Sum_probs=49.4

Q ss_pred             hccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccccccccCCCCCCC
Q 045639          207 EDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTLSLT  264 (348)
Q Consensus       207 L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~~~~~~~  264 (348)
                      |..|+++|++++||.|.+||+.|.....|.   ++|+++++|.|..|+..|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            778999999999999999999999998886   8999999999999999887665543

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.3e-10  Score=74.58  Aligned_cols=41  Identities=24%  Similarity=0.483  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.7e-10  Score=73.40  Aligned_cols=41  Identities=22%  Similarity=0.424  Sum_probs=38.6

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCC-CccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKK-PKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~-~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|++ +++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            66789999999999999999999999999999999 999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.1e-10  Score=74.63  Aligned_cols=41  Identities=24%  Similarity=0.370  Sum_probs=38.9

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999987

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.91  E-value=4.2e-10  Score=76.90  Aligned_cols=51  Identities=10%  Similarity=0.019  Sum_probs=44.9

Q ss_pred             ccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCcccc
Q 045639          123 MKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAML  177 (348)
Q Consensus       123 ~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~  177 (348)
                      +.|.....|    ..|.++|+|+++|.|.+||+.|.....|..|+++|+++++|.
T Consensus         4 k~~~~~~~l----~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGT----EKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCC----CCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcch----hhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            677777777    445668999999999999999999999999999999999873

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.91  E-value=2.8e-10  Score=79.22  Aligned_cols=56  Identities=20%  Similarity=0.258  Sum_probs=48.7

Q ss_pred             cccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhh-hhcCCC
Q 045639          108 EIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHR-ASHKKP  173 (348)
Q Consensus       108 ~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~-~~H~~~  173 (348)
                      ++|.|.+      |++.|.....|..    |+++|+++++|.|..|++.|.....|..|+ ++|.++
T Consensus         1 k~~~C~~------C~~~f~~~~~l~~----H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEV------CTRAFARQEHLKR----HYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTT------TCCCBSCHHHHHH----HHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCC------CccccCCHHHHHH----HHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4688887      8899999999944    556899999999999999999999999996 788765

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=1.1e-09  Score=74.91  Aligned_cols=48  Identities=23%  Similarity=0.431  Sum_probs=44.4

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhh-hcCCCCCCcccccccccCC
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMR-RHRSAPVAATAAAMATTNT  259 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~~~~~~~~  259 (348)
                      ..|++++||.|.+|++.|.....|..|++ +|.++++|.|..|+..|..
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            46889999999999999999999999997 9999999999999988754

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=8.7e-10  Score=70.55  Aligned_cols=39  Identities=28%  Similarity=0.497  Sum_probs=37.0

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      ++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            478899999999999999999999999999999999987

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=8.6e-10  Score=72.44  Aligned_cols=41  Identities=24%  Similarity=0.409  Sum_probs=38.0

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      ++++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCC
Confidence            34578999999999999999999999999999999999988

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.89  E-value=8.5e-10  Score=69.85  Aligned_cols=37  Identities=41%  Similarity=0.646  Sum_probs=34.1

Q ss_pred             CCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcc
Q 045639          214 GNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAAT  250 (348)
Q Consensus       214 H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~  250 (348)
                      |++++||.|.+||+.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            6789999999999999999999999999999998865

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=9.4e-10  Score=73.15  Aligned_cols=44  Identities=23%  Similarity=0.392  Sum_probs=40.7

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccccc
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMA  255 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~  255 (348)
                      ..|.++++|.|.+|++.|.....|..|+++|+++++|.|..|+.
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            35788999999999999999999999999999999999998863

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.7e-10  Score=72.40  Aligned_cols=41  Identities=24%  Similarity=0.433  Sum_probs=38.1

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +.++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            34578999999999999999999999999999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.2e-09  Score=71.85  Aligned_cols=40  Identities=23%  Similarity=0.283  Sum_probs=37.8

Q ss_pred             ccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          139 GTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       139 ~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      .++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            4578999999999999999999999999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.1e-09  Score=71.60  Aligned_cols=39  Identities=23%  Similarity=0.363  Sum_probs=37.0

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C   41 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG   41 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCC
Confidence            368899999999999999999999999999999999998

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.86  E-value=1.5e-09  Score=66.73  Aligned_cols=35  Identities=20%  Similarity=0.431  Sum_probs=32.7

Q ss_pred             cCCCCCceeccccCcccCChhHHHhHhhhcCCCCC
Q 045639          213 NGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPV  247 (348)
Q Consensus       213 ~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  247 (348)
                      +|++++||.|.+||+.|.....|..|+++|+++++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47899999999999999999999999999998864

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.86  E-value=1.4e-09  Score=66.72  Aligned_cols=35  Identities=26%  Similarity=0.426  Sum_probs=32.6

Q ss_pred             cCCCCCceeccccCcccCChhHHHhHhhhcCCCCC
Q 045639          213 NGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPV  247 (348)
Q Consensus       213 ~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  247 (348)
                      +|++++||.|.+||+.|.+...|..|+++|+++++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999998864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1e-09  Score=72.15  Aligned_cols=40  Identities=25%  Similarity=0.473  Sum_probs=37.6

Q ss_pred             ccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          139 GTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       139 ~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      +++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP   43 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4578999999999999999999999999999999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.84  E-value=2e-09  Score=69.79  Aligned_cols=39  Identities=21%  Similarity=0.363  Sum_probs=36.9

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      ++|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            368899999999999999999999999999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.83  E-value=5.1e-10  Score=85.27  Aligned_cols=60  Identities=18%  Similarity=0.070  Sum_probs=51.8

Q ss_pred             ccccccCCCCCCCCccccCcccccccccccccC-CCCCcc--------cccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          109 IAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTG-KGGCYV--------YECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       109 ~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~-h~g~kp--------y~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      .|.|.+      |++.|.....|..|    +++ |+++++        |.|.+|++.|.....|..|+++|+++++|.|
T Consensus        25 ~~~C~~------C~k~f~~~~~L~~H----~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           25 SRPKKS------CDRTFSTMHELVTH----VTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSSCCC------CCCCCSSHHHHHHH----HHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CCcccc------cccccCCHHHHHHH----HHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            355665      88999999999554    445 888887        9999999999999999999999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.82  E-value=6.6e-10  Score=78.39  Aligned_cols=49  Identities=10%  Similarity=0.173  Sum_probs=34.1

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCccCCChHH
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDDRLSLKSQ  188 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~~f~~~~~  188 (348)
                      .|.++|+|+++|.|..||+.|.....|.   ++|.++++|.|  |++.|....+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            3455677777777777777777766665   66777777777  7777766544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=2.1e-09  Score=71.35  Aligned_cols=41  Identities=20%  Similarity=0.323  Sum_probs=37.5

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC--CCc
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM--NDD  181 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c--C~~  181 (348)
                      .|.++++|.|.+|++.|.....|..|+++|+++++|.|  |++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            56788999999999999999999999999999999999  764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.2e-09  Score=70.16  Aligned_cols=41  Identities=27%  Similarity=0.430  Sum_probs=37.9

Q ss_pred             cccCCCCCcccccC--CCCCccCCchhHhhhhhhcCCCccccC
Q 045639          138 TGTGKGGCYVYECK--TCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       138 h~~~h~g~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |.++|+++++|.|.  .|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C   45 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP   45 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSS
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45688999999998  899999999999999999999999988

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=3.8e-09  Score=75.62  Aligned_cols=41  Identities=29%  Similarity=0.244  Sum_probs=36.7

Q ss_pred             cCCCCCceeccc--cCcccCChhHHHhHh-hhcCCCCCCccccc
Q 045639          213 NGNSSKVHECSI--CGAEFTSGQALGGHM-RRHRSAPVAATAAA  253 (348)
Q Consensus       213 ~H~~ekp~~C~~--Cgk~F~~~~~L~~H~-r~H~~~~~~~~~~~  253 (348)
                      .++|+|||+|.+  |||+|.+.+.|..|+ ++|++++|+.|...
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            368999999975  999999999999998 68999999988754

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.5e-09  Score=66.19  Aligned_cols=35  Identities=23%  Similarity=0.398  Sum_probs=32.5

Q ss_pred             cccCCCCCceeccccCcccCChhHHHhH-hhhcCCC
Q 045639          211 FRNGNSSKVHECSICGAEFTSGQALGGH-MRRHRSA  245 (348)
Q Consensus       211 ~~~H~~ekp~~C~~Cgk~F~~~~~L~~H-~r~H~~~  245 (348)
                      +++|+++|||+|.+||+.|.....|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            4689999999999999999999999999 9999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=4.8e-09  Score=64.92  Aligned_cols=35  Identities=26%  Similarity=0.439  Sum_probs=32.4

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +.|++++||+|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            46889999999999999999999999999998864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=5.4e-09  Score=64.67  Aligned_cols=35  Identities=34%  Similarity=0.594  Sum_probs=32.5

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +.|++++||+|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            46899999999999999999999999999999864

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1e-09  Score=78.14  Aligned_cols=59  Identities=10%  Similarity=0.068  Sum_probs=50.9

Q ss_pred             cCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccC-CCCCccCCchhHhhhhhhcCCCcc
Q 045639          105 EQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECK-TCNRTFPSFQALGGHRASHKKPKA  175 (348)
Q Consensus       105 ~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~-~Cgk~F~s~~~L~~H~~~H~~~k~  175 (348)
                      .++++|.|..      |++.|. ...|..|    .++ ++++||.|. .||+.|.....|..|+++|...++
T Consensus         6 C~~~~~~C~~------C~k~f~-~~~L~~H----~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTY------CTKEFV-FDTIQSH----QYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSS------SCCEEE-HHHHHHH----HHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccc------cCCccC-HHHHHHH----HHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            5678999988      889999 9888555    446 899999999 999999999999999999976554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.5e-09  Score=65.97  Aligned_cols=35  Identities=23%  Similarity=0.503  Sum_probs=32.6

Q ss_pred             ccCCCCCceeccccCcccCCh-hHHHhHhhhcCCCC
Q 045639          212 RNGNSSKVHECSICGAEFTSG-QALGGHMRRHRSAP  246 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~-~~L~~H~r~H~~~~  246 (348)
                      ++|++++||+|.+|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            578999999999999999999 99999999998864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=5.4e-09  Score=64.54  Aligned_cols=35  Identities=26%  Similarity=0.460  Sum_probs=32.4

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      .+|++++||+|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            36899999999999999999999999999999874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=5.5e-09  Score=66.31  Aligned_cols=33  Identities=21%  Similarity=0.453  Sum_probs=30.7

Q ss_pred             cCCCCCceeccc--cCcccCChhHHHhHhhhcCCC
Q 045639          213 NGNSSKVHECSI--CGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       213 ~H~~ekp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      .++++|||+|.+  |++.|.+.+.|..||++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            478999999986  999999999999999999986

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.73  E-value=5.1e-09  Score=66.16  Aligned_cols=37  Identities=41%  Similarity=0.626  Sum_probs=33.9

Q ss_pred             CCCCcccccCCCCCccCCchhHhhhhhhcCCCccccC
Q 045639          142 KGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       142 h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |+++++|.|.+||+.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5688999999999999999999999999999999864

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=8.3e-09  Score=63.66  Aligned_cols=34  Identities=35%  Similarity=0.658  Sum_probs=31.9

Q ss_pred             cCCCCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          213 NGNSSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       213 ~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +|+++++|.|.+||+.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5889999999999999999999999999999874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.70  E-value=1e-08  Score=63.70  Aligned_cols=36  Identities=28%  Similarity=0.560  Sum_probs=33.3

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      |.++|+|+++|+|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            567899999999999999999999999999999874

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=6.7e-09  Score=64.58  Aligned_cols=36  Identities=14%  Similarity=0.396  Sum_probs=33.5

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhhhcCCCcc
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKA  175 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~  175 (348)
                      ++|+++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            478899999999999999999999999999998875

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=6.1e-09  Score=76.50  Aligned_cols=64  Identities=16%  Similarity=0.295  Sum_probs=50.3

Q ss_pred             cccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCC
Q 045639          136 TGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGN  215 (348)
Q Consensus       136 ~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~  215 (348)
                      ..|.+.|.++++|.|..|++.|. ...|..|. .|                                            .
T Consensus         6 ~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~--------------------------------------------c   39 (75)
T 2d9k_A            6 SGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DY--------------------------------------------C   39 (75)
T ss_dssp             SCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HH--------------------------------------------H
T ss_pred             HhhCcccCCCcccCCcccChHhh-HHHHHHHH-hH--------------------------------------------c
Confidence            34566788999999999999984 66666665 44                                            4


Q ss_pred             CCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          216 SSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       216 ~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +++||.|..||+.|.. ..|..|+++|.+++
T Consensus        40 ~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           40 GARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             HHCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             CCCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            5678899999998874 88999999998875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.67  E-value=8.9e-09  Score=68.54  Aligned_cols=35  Identities=23%  Similarity=0.465  Sum_probs=30.3

Q ss_pred             cCCCCCceeccccCcccCChhHHHhHhh-hcCCCCC
Q 045639          213 NGNSSKVHECSICGAEFTSGQALGGHMR-RHRSAPV  247 (348)
Q Consensus       213 ~H~~ekp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~  247 (348)
                      +|+++|||.|.+||+.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5899999999999999999999999999 9998763

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.66  E-value=1.2e-08  Score=62.15  Aligned_cols=32  Identities=19%  Similarity=0.317  Sum_probs=30.2

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCCCCc
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAPVAA  249 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~  249 (348)
                      |||.|.+||+.|.....|..|+++|++++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999874

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=9.7e-09  Score=64.29  Aligned_cols=36  Identities=25%  Similarity=0.393  Sum_probs=33.1

Q ss_pred             CCCCCceecc--ccCcccCChhHHHhHhhhcCCCCCCc
Q 045639          214 GNSSKVHECS--ICGAEFTSGQALGGHMRRHRSAPVAA  249 (348)
Q Consensus       214 H~~ekp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~  249 (348)
                      |++++||.|.  .||+.|.....|..|+++|+++++|+
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            6789999999  59999999999999999999998763

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.6e-09  Score=82.21  Aligned_cols=47  Identities=13%  Similarity=0.123  Sum_probs=42.2

Q ss_pred             hccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCccccc
Q 045639          207 EDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAA  253 (348)
Q Consensus       207 L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~  253 (348)
                      +..|.++|++++||.|.+||+.|.....|..|+++|+++++|.|..+
T Consensus        13 ~~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~   59 (88)
T 1x6f_A           13 IILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ   59 (88)
T ss_dssp             CCCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             eeccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh
Confidence            34456789999999999999999999999999999999999998755

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.65  E-value=1.4e-08  Score=62.23  Aligned_cols=35  Identities=20%  Similarity=0.419  Sum_probs=32.4

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCcc
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKA  175 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~  175 (348)
                      +|+|+++|.|.+|++.|.....|..|+++|+++++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47889999999999999999999999999998864

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.64  E-value=1.6e-08  Score=72.40  Aligned_cols=38  Identities=26%  Similarity=0.267  Sum_probs=35.2

Q ss_pred             CCCCCcccccCC--CCCccCCchhHhhhh-hhcCCCccccC
Q 045639          141 GKGGCYVYECKT--CNRTFPSFQALGGHR-ASHKKPKAMLM  178 (348)
Q Consensus       141 ~h~g~kpy~C~~--Cgk~F~s~~~L~~H~-~~H~~~k~~~c  178 (348)
                      ..+|+|||+|..  |+|+|.....|..|+ ++|+++|||.|
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            568999999975  999999999999997 79999999988

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.64  E-value=1.4e-08  Score=62.09  Aligned_cols=35  Identities=26%  Similarity=0.396  Sum_probs=32.3

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCcc
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKA  175 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~  175 (348)
                      +|+++++|.|.+|++.|.....|..|+++|+++++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47789999999999999999999999999998864

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.5e-08  Score=62.54  Aligned_cols=34  Identities=29%  Similarity=0.627  Sum_probs=31.6

Q ss_pred             cCCCCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          213 NGNSSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       213 ~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      .|.+++||.|.+|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4788999999999999999999999999999874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.60  E-value=1.2e-08  Score=67.52  Aligned_cols=40  Identities=18%  Similarity=0.329  Sum_probs=35.2

Q ss_pred             hccccccCCCCCceecc--ccCcccCChhHHHhHhhhcCCCC
Q 045639          207 EDGNFRNGNSSKVHECS--ICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       207 L~~H~~~H~~ekp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +..|..+|++++||.|.  +||+.|.....|..|+++|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            44556779999999996  79999999999999999999874

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.57  E-value=9.2e-09  Score=74.16  Aligned_cols=59  Identities=19%  Similarity=0.320  Sum_probs=49.5

Q ss_pred             ccCccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCC--CCCccCCchhHhhhhhhc
Q 045639          104 HEQEEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKT--CNRTFPSFQALGGHRASH  170 (348)
Q Consensus       104 h~~e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~--Cgk~F~s~~~L~~H~~~H  170 (348)
                      +...++|.|..    ..|++.|.....|.    .|+++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~----~~C~k~f~~~~~L~----~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSH----PGCGKTYFKSSHLK----AHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSS----TTTCCEESSHHHHH----HHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCC----CCCccccCCHHHHH----HHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45678899975    23889999999994    4556899999999965  999999999999999887

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.54  E-value=2.8e-08  Score=61.99  Aligned_cols=34  Identities=29%  Similarity=0.593  Sum_probs=31.1

Q ss_pred             cCCCCCceeccc--cCcccCChhHHHhHhhhcCCCC
Q 045639          213 NGNSSKVHECSI--CGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       213 ~H~~ekp~~C~~--Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      .|++++||.|.+  ||+.|...+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478999999995  9999999999999999999874

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=4.3e-08  Score=60.43  Aligned_cols=34  Identities=21%  Similarity=0.402  Sum_probs=31.6

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      .|+++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            6788999999999999999999999999998864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=3e-08  Score=61.59  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=32.1

Q ss_pred             cCCCCCcccccCCCCCccCCc-hhHhhhhhhcCCCc
Q 045639          140 TGKGGCYVYECKTCNRTFPSF-QALGGHRASHKKPK  174 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~-~~L~~H~~~H~~~k  174 (348)
                      ++|+++++|.|..|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            468899999999999999999 99999999998764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.52  E-value=7.5e-09  Score=62.50  Aligned_cols=31  Identities=19%  Similarity=0.372  Sum_probs=29.4

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAPVA  248 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  248 (348)
                      |||+|.+||+.|.....|..|+++|++++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            6899999999999999999999999999876

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=4.6e-08  Score=60.17  Aligned_cols=34  Identities=21%  Similarity=0.289  Sum_probs=31.8

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      .|+++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            6889999999999999999999999999998864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=5.4e-08  Score=59.99  Aligned_cols=35  Identities=20%  Similarity=0.338  Sum_probs=32.1

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      ..|+++++|+|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            36889999999999999999999999999998764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=1.1e-07  Score=67.91  Aligned_cols=36  Identities=22%  Similarity=0.481  Sum_probs=33.0

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCCCC
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPV  247 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  247 (348)
                      ..|.++|||+|.+|+|.|.+...|..|+++|+++..
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            457889999999999999999999999999999764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=7.8e-08  Score=59.11  Aligned_cols=34  Identities=21%  Similarity=0.341  Sum_probs=31.7

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      .|+++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            6788999999999999999999999999998864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=5.9e-08  Score=60.44  Aligned_cols=34  Identities=18%  Similarity=0.315  Sum_probs=31.4

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhh-hhhcCCC
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGH-RASHKKP  173 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H-~~~H~~~  173 (348)
                      ++|+|++||+|..|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            478899999999999999999999999 9999874

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.48  E-value=7.5e-08  Score=56.24  Aligned_cols=30  Identities=23%  Similarity=0.509  Sum_probs=28.0

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      ++||.|.+||+.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            589999999999999999999999999864

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=6.5e-08  Score=61.26  Aligned_cols=33  Identities=21%  Similarity=0.375  Sum_probs=30.6

Q ss_pred             CCCCCcccccCC--CCCccCCchhHhhhhhhcCCC
Q 045639          141 GKGGCYVYECKT--CNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       141 ~h~g~kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      .++|++||+|.+  |+|.|.....|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            577899999986  999999999999999999885

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.45  E-value=9.1e-08  Score=58.05  Aligned_cols=32  Identities=22%  Similarity=0.415  Sum_probs=30.2

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCcccc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPKAML  177 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~  177 (348)
                      +||.|.+||+.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.45  E-value=6.2e-08  Score=60.49  Aligned_cols=35  Identities=17%  Similarity=0.348  Sum_probs=32.6

Q ss_pred             CCCCcccccC--CCCCccCCchhHhhhhhhcCCCccc
Q 045639          142 KGGCYVYECK--TCNRTFPSFQALGGHRASHKKPKAM  176 (348)
Q Consensus       142 h~g~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k~~  176 (348)
                      |+|+++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5789999999  5999999999999999999999887

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.42  E-value=1e-07  Score=55.43  Aligned_cols=29  Identities=21%  Similarity=0.355  Sum_probs=27.1

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |||.|.+||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            68999999999999999999999998864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.41  E-value=1.2e-07  Score=54.73  Aligned_cols=28  Identities=29%  Similarity=0.647  Sum_probs=26.2

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      ++||.|.+||+.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5799999999999999999999999975

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.41  E-value=1.3e-07  Score=54.91  Aligned_cols=29  Identities=24%  Similarity=0.574  Sum_probs=27.0

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +||.|.+||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999998864

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.40  E-value=1.1e-07  Score=63.16  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=30.0

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhh-hcCCCcc
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRA-SHKKPKA  175 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~-~H~~~k~  175 (348)
                      +|+|+++|.|.+||+.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4789999999999999999999999999 9988754

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.4e-07  Score=58.04  Aligned_cols=34  Identities=24%  Similarity=0.491  Sum_probs=31.3

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      .|+++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            5778999999999999999999999999998864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=2.1e-07  Score=55.58  Aligned_cols=30  Identities=20%  Similarity=0.439  Sum_probs=27.8

Q ss_pred             CCceecc--ccCcccCChhHHHhHhhhcCCCC
Q 045639          217 SKVHECS--ICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       217 ekp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      ++||.|.  +||+.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            5899999  89999999999999999999864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.37  E-value=1.6e-07  Score=53.82  Aligned_cols=27  Identities=30%  Similarity=0.520  Sum_probs=25.4

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      ++||.|.+||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            589999999999999999999999985

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.37  E-value=1.3e-07  Score=54.34  Aligned_cols=27  Identities=30%  Similarity=0.544  Sum_probs=25.4

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      ++||+|.+||+.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            579999999999999999999999985

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.35  E-value=2.4e-07  Score=54.89  Aligned_cols=29  Identities=31%  Similarity=0.650  Sum_probs=27.0

Q ss_pred             Cceecc--ccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECS--ICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |||.|.  +||+.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.35  E-value=6.4e-08  Score=58.26  Aligned_cols=31  Identities=26%  Similarity=0.495  Sum_probs=29.0

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCccc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPKAM  176 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~  176 (348)
                      +||.|.+||+.|.....|..|+++|+++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4899999999999999999999999999886

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=1.5e-07  Score=54.57  Aligned_cols=29  Identities=31%  Similarity=0.611  Sum_probs=27.0

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +||.|.+||+.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999998864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=5.6e-08  Score=56.95  Aligned_cols=30  Identities=30%  Similarity=0.450  Sum_probs=27.7

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      ++||.|.+||+.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            479999999999999999999999998764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=5.9e-08  Score=56.59  Aligned_cols=29  Identities=34%  Similarity=0.729  Sum_probs=27.0

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |||.|.+||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=1.6e-07  Score=54.30  Aligned_cols=29  Identities=28%  Similarity=0.564  Sum_probs=27.0

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |||.|.+||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            68999999999999999999999998864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.33  E-value=2.5e-07  Score=53.89  Aligned_cols=29  Identities=21%  Similarity=0.419  Sum_probs=27.2

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +||.|.+||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=2e-07  Score=61.39  Aligned_cols=37  Identities=19%  Similarity=0.318  Sum_probs=32.8

Q ss_pred             cccCCCCCcccccC--CCCCccCCchhHhhhhhhcCCCc
Q 045639          138 TGTGKGGCYVYECK--TCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       138 h~~~h~g~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +...|+|+++|.|.  .||+.|.....|..|+++|++++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34568999999996  79999999999999999999864

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.30  E-value=3.5e-07  Score=52.15  Aligned_cols=27  Identities=30%  Similarity=0.655  Sum_probs=24.2

Q ss_pred             ceeccccCcccCChhHHHhHhhhcCCC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      ||+|.+||+.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999874

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.27  E-value=2.8e-07  Score=57.29  Aligned_cols=34  Identities=18%  Similarity=0.307  Sum_probs=30.7

Q ss_pred             CCCCCcccccCC--CCCccCCchhHhhhhhhcCCCc
Q 045639          141 GKGGCYVYECKT--CNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       141 ~h~g~kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      .|+|+++|.|.+  ||+.|.....|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            378899999995  9999999999999999998864

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.26  E-value=4.8e-07  Score=52.87  Aligned_cols=29  Identities=28%  Similarity=0.489  Sum_probs=26.7

Q ss_pred             CceeccccCcccCChhHHHhH-hhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGH-MRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H-~r~H~~~~  246 (348)
                      +||.|.+||+.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 79999864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.26  E-value=5e-07  Score=56.38  Aligned_cols=26  Identities=27%  Similarity=0.402  Sum_probs=25.0

Q ss_pred             CCCCCceeccccCcccCChhHHHhHh
Q 045639          214 GNSSKVHECSICGAEFTSGQALGGHM  239 (348)
Q Consensus       214 H~~ekp~~C~~Cgk~F~~~~~L~~H~  239 (348)
                      +.+||||+|.+|||+|.+.+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            57899999999999999999999999

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.19  E-value=4.8e-07  Score=56.47  Aligned_cols=26  Identities=23%  Similarity=0.330  Sum_probs=24.6

Q ss_pred             CCCCcccccCCCCCccCCchhHhhhh
Q 045639          142 KGGCYVYECKTCNRTFPSFQALGGHR  167 (348)
Q Consensus       142 h~g~kpy~C~~Cgk~F~s~~~L~~H~  167 (348)
                      +.|++||+|.+|||.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            56899999999999999999999998

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=2e-07  Score=52.86  Aligned_cols=26  Identities=35%  Similarity=0.727  Sum_probs=24.4

Q ss_pred             CceeccccCcccCChhHHHhHhhhcC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |||.|.+||+.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999999984

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.18  E-value=7.3e-07  Score=51.83  Aligned_cols=30  Identities=27%  Similarity=0.511  Sum_probs=27.6

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +++|.|..||+.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998864

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.16  E-value=1.1e-06  Score=62.66  Aligned_cols=36  Identities=22%  Similarity=0.423  Sum_probs=32.5

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhhhcCCCcc
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRASHKKPKA  175 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~  175 (348)
                      ..+.+++||+|.+|+|.|.....|..|+++|+++..
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            357789999999999999999999999999998653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.13  E-value=9.3e-07  Score=51.13  Aligned_cols=29  Identities=28%  Similarity=0.532  Sum_probs=26.8

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +||.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999998764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.13  E-value=1.2e-06  Score=50.55  Aligned_cols=29  Identities=31%  Similarity=0.611  Sum_probs=26.7

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      ++|.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.11  E-value=1.8e-06  Score=51.33  Aligned_cols=30  Identities=27%  Similarity=0.541  Sum_probs=27.5

Q ss_pred             CcccccC--CCCCccCCchhHhhhhhhcCCCc
Q 045639          145 CYVYECK--TCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       145 ~kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      ++||.|.  .||+.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4799999  89999999999999999999864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=6e-07  Score=65.66  Aligned_cols=55  Identities=13%  Similarity=0.091  Sum_probs=48.8

Q ss_pred             hhhccccccCCCCCceeccccCcccCChhHHHhHhhhcCCCCCCcccccccccCCCC
Q 045639          205 EEEDGNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAPVAATAAAMATTNTTL  261 (348)
Q Consensus       205 ~~L~~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~~~~  261 (348)
                      ..|..|+++|.++|||.|..|++.|. ...|..|+ .|.+++++.|..|+..+....
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~~~   57 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLVKD   57 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEETTG
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcHHH
Confidence            34889999999999999999999995 89999999 999999999999988765433

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=1.3e-06  Score=50.16  Aligned_cols=28  Identities=21%  Similarity=0.489  Sum_probs=25.8

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCC
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      +++|.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999999874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.05  E-value=1.6e-06  Score=49.48  Aligned_cols=27  Identities=22%  Similarity=0.460  Sum_probs=25.0

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcC
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      +++|.|..||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999884

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=1.5e-06  Score=50.05  Aligned_cols=29  Identities=21%  Similarity=0.391  Sum_probs=26.6

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +||.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.05  E-value=2e-06  Score=49.90  Aligned_cols=30  Identities=17%  Similarity=0.341  Sum_probs=27.2

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCcc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPKA  175 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~  175 (348)
                      ++|.|..||+.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            479999999999999999999999988653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.05  E-value=2.3e-06  Score=50.44  Aligned_cols=29  Identities=24%  Similarity=0.551  Sum_probs=26.7

Q ss_pred             cccccC--CCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECK--TCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +||.|.  .||+.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            489998  99999999999999999999864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.31  E-value=5.8e-07  Score=52.40  Aligned_cols=30  Identities=33%  Similarity=0.487  Sum_probs=27.1

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +++|.|..||+.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            368999999999999999999999998764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=1.4e-06  Score=49.91  Aligned_cols=27  Identities=26%  Similarity=0.603  Sum_probs=24.9

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcC
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      ++||+|..||+.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999884

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.29  E-value=6.4e-07  Score=51.97  Aligned_cols=29  Identities=24%  Similarity=0.453  Sum_probs=26.4

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +||.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            48999999999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.03  E-value=1.4e-06  Score=50.25  Aligned_cols=29  Identities=24%  Similarity=0.456  Sum_probs=26.7

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47999999999999999999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.02  E-value=2.8e-06  Score=48.15  Aligned_cols=27  Identities=37%  Similarity=0.766  Sum_probs=24.0

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      ||.|..||+.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999864

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.01  E-value=3.1e-06  Score=49.22  Aligned_cols=29  Identities=31%  Similarity=0.515  Sum_probs=26.4

Q ss_pred             cccccCCCCCccCCchhHhhh-hhhcCCCc
Q 045639          146 YVYECKTCNRTFPSFQALGGH-RASHKKPK  174 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H-~~~H~~~k  174 (348)
                      ++|.|..||+.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            479999999999999999999 79998864

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.01  E-value=2.3e-06  Score=49.32  Aligned_cols=27  Identities=30%  Similarity=0.577  Sum_probs=25.3

Q ss_pred             Cceecc--ccCcccCChhHHHhHhhhcCC
Q 045639          218 KVHECS--ICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       218 kp~~C~--~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      ++|.|.  +||+.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999975

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.05  E-value=2.3e-06  Score=48.26  Aligned_cols=26  Identities=27%  Similarity=0.586  Sum_probs=23.8

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcC
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      +||.|..||+.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999874

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.65  E-value=1.7e-05  Score=45.41  Aligned_cols=27  Identities=33%  Similarity=0.731  Sum_probs=24.9

Q ss_pred             cccccC--CCCCccCCchhHhhhhhhcCC
Q 045639          146 YVYECK--TCNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       146 kpy~C~--~Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      ++|.|.  .||+.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.70  E-value=0.00039  Score=55.40  Aligned_cols=33  Identities=21%  Similarity=0.356  Sum_probs=29.7

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhc
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H  242 (348)
                      +...|+|+++|.|.+|++.|.+...|..|+|+.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            446789999999999999999999999998854

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.27  E-value=0.0011  Score=52.87  Aligned_cols=32  Identities=25%  Similarity=0.312  Sum_probs=28.5

Q ss_pred             ccCCCCCcccccCCCCCccCCchhHhhhhhhc
Q 045639          139 GTGKGGCYVYECKTCNRTFPSFQALGGHRASH  170 (348)
Q Consensus       139 ~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H  170 (348)
                      ...|+|+++|.|..|+|.|.+...|..|+++.
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            34688999999999999999999999998763

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.17  E-value=0.0015  Score=52.49  Aligned_cols=80  Identities=16%  Similarity=0.213  Sum_probs=52.4

Q ss_pred             cccccCCCCCccCCchhHhhhh--hhcCCC-ccccC-CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCcee
Q 045639          146 YVYECKTCNRTFPSFQALGGHR--ASHKKP-KAMLM-NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHE  221 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~--~~H~~~-k~~~c-C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~  221 (348)
                      +++.|.+|+..|.+...+..|.  +.|... +.+.+ ++.....           ....+.    ...+...+.+.+.|-
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~~~~~~~~   95 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSV-----------PAKKFK----AAPAEISDGEDRSKC   95 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCC-----------SCCCCS----CCSSCCSSCCCTTTE
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCC-----------CCCccC----CCccccccCCCCCeE
Confidence            5789999999999999999998  456432 22222 1111000           000111    111334567788899


Q ss_pred             ccccCcccCChhHHHhHhh
Q 045639          222 CSICGAEFTSGQALGGHMR  240 (348)
Q Consensus       222 C~~Cgk~F~~~~~L~~H~r  240 (348)
                      |.+|++.|.+...|..|.+
T Consensus        96 C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           96 CPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             ETTTTEECSSHHHHHHHHT
T ss_pred             cCCCCCEeCCHHHHHHHHC
Confidence            9999999999999999975

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.74  E-value=0.0094  Score=41.67  Aligned_cols=43  Identities=16%  Similarity=0.100  Sum_probs=31.7

Q ss_pred             CCCCCccCCchhHhhhh-hhcCCCc------cccC----CCccCCChHHHHhhh
Q 045639          151 KTCNRTFPSFQALGGHR-ASHKKPK------AMLM----NDDRLSLKSQHQQQQ  193 (348)
Q Consensus       151 ~~Cgk~F~s~~~L~~H~-~~H~~~k------~~~c----C~~~f~~~~~L~~H~  193 (348)
                      ..|++.|.+...|..|+ +.|.+.+      .|.|    |+..+.....|..|+
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hi   60 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHI   60 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhc
Confidence            45888888888888887 4687655      6777    777777766766665

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.61  E-value=0.011  Score=41.27  Aligned_cols=47  Identities=13%  Similarity=0.102  Sum_probs=36.6

Q ss_pred             CCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCC------ceecc--ccCcccCChhHHHhHhhhc
Q 045639          179 NDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSK------VHECS--ICGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       179 C~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ek------p~~C~--~Cgk~F~~~~~L~~H~r~H  242 (348)
                      |++.|.....|..|+             .    +.|.+.+      +|.|.  .|++.+.....|..|+|+.
T Consensus         9 C~~~f~~~~~l~~Hv-------------~----~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHL-------------L----KDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHH-------------H----HHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHH-------------H----hhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            888888888866664             1    3454443      89997  7999999999999999874

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.46  E-value=0.019  Score=37.08  Aligned_cols=28  Identities=32%  Similarity=0.500  Sum_probs=24.1

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      -+|.|+.|++.|.....|+.||+.--++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            5799999999999999999999854333

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.87  E-value=0.051  Score=35.11  Aligned_cols=23  Identities=35%  Similarity=0.522  Sum_probs=21.8

Q ss_pred             cccccCCCCCccCCchhHhhhhh
Q 045639          146 YVYECKTCNRTFPSFQALGGHRA  168 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~  168 (348)
                      -.|.|+.|++.|.....|.+|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            57999999999999999999998

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=83.79  E-value=0.36  Score=35.59  Aligned_cols=29  Identities=28%  Similarity=0.521  Sum_probs=23.9

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCCCCCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRSAPVA  248 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  248 (348)
                      +.-..|-+||+.|.   .|.+|+++|+|..|.
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgltpe   47 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSMTPE   47 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCSCHH
T ss_pred             CCceEecccchhhH---HHHHHHHHccCCCHH
Confidence            44578999999998   488999998887753

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=82.92  E-value=0.82  Score=27.46  Aligned_cols=26  Identities=23%  Similarity=0.321  Sum_probs=22.2

Q ss_pred             ceeccccCcccCChhHHHhHhh-hcCC
Q 045639          219 VHECSICGAEFTSGQALGGHMR-RHRS  244 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r-~H~~  244 (348)
                      .|.|++|.+.|.....|..|-. .|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            4999999999999999999954 5543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=82.25  E-value=0.17  Score=40.23  Aligned_cols=22  Identities=14%  Similarity=-0.114  Sum_probs=13.6

Q ss_pred             cccccccCCCCCCCCccccCcccccccc
Q 045639          108 EIAQLQINNNVNNSGMKFNSRRFLEAPG  135 (348)
Q Consensus       108 ~~~~c~~~~~~~~c~~~f~~~~~l~~~~  135 (348)
                      +++.|..      |...|.+...+..|.
T Consensus        31 ~~~~C~~------C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           31 SDTQCKV------CSAVLISESQKLAHY   52 (127)
T ss_dssp             CSSEETT------TTEECCSHHHHHHHH
T ss_pred             CCCcCcC------CCCEeCCHHHHHHHH
Confidence            3456766      667787766665443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	348
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	1e-12
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	1e-11

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 59.3 bits (144), Expect = 1e-12
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 147 VYECKTCNRTFPSFQALGGHRASHKKPKAML 177
            Y C  C R F S QALGGH   H++ +A L
Sbjct: 5   SYTCSFCKREFRSAQALGGHMNVHRRDRARL 35

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.6 bits (137), Expect = 1e-11
 Identities = 15/27 (55%), Positives = 17/27 (62%)

Query: 217 SKVHECSICGAEFTSGQALGGHMRRHR 243
            + + CS C  EF S QALGGHM  HR
Sbjct: 3   PRSYTCSFCKREFRSAQALGGHMNVHR 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	348
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.53
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.41
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.33
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.31
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.28
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.28
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.22
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.21
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.18
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.18
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.16
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.14
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.11
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.1
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.08
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.08
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.02
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.01
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.9
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.89
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.86
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.86
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.85
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.85
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.82
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.79
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.72
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.71
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.68
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.65
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.58
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.54
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.54
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.49
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.45
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.44
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.44
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.4
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.31
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.28
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.24
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.15
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.12
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.07
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.05
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.98
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.98
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.88
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.77
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.75
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.7
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.67
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.64
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.64
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.52
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.5
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.39
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.34
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.33
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.31
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.16
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.15
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.15
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.05
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.99
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.82
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.81
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.76
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.57
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.52
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.46
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.45
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.43
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.36
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.27
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.24
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.1
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.08
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.87
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.8
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.74
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.52
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.92
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.87
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.72
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.68
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.45
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.38
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.18
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.04
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.33
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.9
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	91.34
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.28
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.82
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	90.77
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.24
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.14
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.05
d1y0jb1	36	U-shaped transcription factor, different fingers {	87.57
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.71
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	83.44
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	82.68
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	82.18
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	81.91
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	81.42
d1y0jb1	36	U-shaped transcription factor, different fingers {	80.46

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.6e-15  Score=102.79  Aligned_cols=53  Identities=28%  Similarity=0.616  Sum_probs=45.0

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCCCccccCCCccCCChHHHHhhhcccccCCCCCchhhccccccCCCCCceeccc
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKKPKAMLMNDDRLSLKSQHQQQQQQQFLVSKSDDEEEDGNFRNGNSSKVHECSI  224 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~cC~~~f~~~~~L~~H~~~~~C~~f~~~~~L~~H~~~H~~ekp~~C~~  224 (348)
                      ||||+| .||+.|.....|..|+++|                                            +|+|||.|.+
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~H--------------------------------------------t~ekpy~C~~   35 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMH--------------------------------------------LGLRPYGCGV   35 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHH--------------------------------------------SCCCSEECTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhcc--------------------------------------------ccccCCcCCC
Confidence            578999 4999998888888777655                                            5678899999


Q ss_pred             cCcccCChhHHHhHhhhc
Q 045639          225 CGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       225 Cgk~F~~~~~L~~H~r~H  242 (348)
                      ||+.|.....|..|||+|
T Consensus        36 C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          36 CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             TSCEESSSHHHHHHHTTT
T ss_pred             cCCEecCHHHHHHHHhcC
Confidence            999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=5.8e-14  Score=87.73  Aligned_cols=37  Identities=22%  Similarity=0.435  Sum_probs=35.9

Q ss_pred             cccccCCCCCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          209 GNFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       209 ~H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      +|+++|+++|||+|.+|||+|.+.++|..|+|+|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.3e-13  Score=81.73  Aligned_cols=33  Identities=27%  Similarity=0.434  Sum_probs=31.9

Q ss_pred             cCCCCCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          213 NGNSSKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       213 ~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      +|+|+|||+|.+||++|.+.+.|..|+|+|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=8.5e-14  Score=94.12  Aligned_cols=53  Identities=21%  Similarity=0.327  Sum_probs=48.4

Q ss_pred             ccccccccCCCCCCCCccccCcccccccccccccCCCCCcccccCCCCCccCCchhHhhhhhhc
Q 045639          107 EEIAQLQINNNVNNSGMKFNSRRFLEAPGTGTGTGKGGCYVYECKTCNRTFPSFQALGGHRASH  170 (348)
Q Consensus       107 e~~~~c~~~~~~~~c~~~f~~~~~l~~~~~~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H  170 (348)
                      |++|.| .      ||+.|..+..|    ..|+++|+|++||.|.+||+.|.....|..|+++|
T Consensus         1 EK~y~C-~------Cgk~F~~~~~l----~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-Q------CGKSFTHKSQR----DRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-T------TSCEESSHHHH----HHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-C------CCCeECCHHHh----HHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 5      78999999999    45667999999999999999999999999999987

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=7.6e-13  Score=81.43  Aligned_cols=35  Identities=29%  Similarity=0.458  Sum_probs=33.1

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |+|+|||||+|.+||++|...+.|..||++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            68999999999999999999999999999998764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.28  E-value=9e-13  Score=81.65  Aligned_cols=35  Identities=26%  Similarity=0.462  Sum_probs=33.6

Q ss_pred             ccccCCCCCceeccccCcccCChhHHHhHhhhcCC
Q 045639          210 NFRNGNSSKVHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       210 H~~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      |.|+|+|||||+|.+||++|.+.++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            78999999999999999999999999999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.5e-12  Score=80.12  Aligned_cols=37  Identities=22%  Similarity=0.448  Sum_probs=35.0

Q ss_pred             ccccCCCCCcccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          137 GTGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       137 ~h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      +|+++|++++||+|++|||+|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3778999999999999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=3.3e-12  Score=77.58  Aligned_cols=32  Identities=22%  Similarity=0.501  Sum_probs=30.7

Q ss_pred             CCCCCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          214 GNSSKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       214 H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      |+|||||+|.+|||.|.+..+|..|||+|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            79999999999999999999999999999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=5.5e-12  Score=78.59  Aligned_cols=36  Identities=28%  Similarity=0.493  Sum_probs=33.8

Q ss_pred             CCCceeccccCcccCChhHHHhHhh-hcCCCCCCccc
Q 045639          216 SSKVHECSICGAEFTSGQALGGHMR-RHRSAPVAATA  251 (348)
Q Consensus       216 ~ekp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~  251 (348)
                      .+|||+|.+|||.|.+..+|..||+ +|+|++||.|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4799999999999999999999986 79999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4e-12  Score=76.15  Aligned_cols=33  Identities=24%  Similarity=0.425  Sum_probs=31.7

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      +|+|++||+|.+|||+|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=7.2e-12  Score=76.85  Aligned_cols=34  Identities=29%  Similarity=0.520  Sum_probs=30.3

Q ss_pred             ccCCCCCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          212 RNGNSSKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       212 ~~H~~ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      |+|+|||||+|.+||+.|.+..+|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            6899999999999999999999999998765443

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.14  E-value=9.7e-12  Score=72.34  Aligned_cols=29  Identities=24%  Similarity=0.574  Sum_probs=28.0

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |||.|.+|||+|.+.+.|..|||+|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            79999999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=8.1e-12  Score=71.84  Aligned_cols=28  Identities=32%  Similarity=0.674  Sum_probs=27.1

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      ||||+|.+|||+|.+.+.|..|||+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7999999999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.10  E-value=8.2e-12  Score=81.34  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=37.2

Q ss_pred             hhhccccccCCCCCceeccc--cCcccCChhHHHhHhhhcCCCC
Q 045639          205 EEEDGNFRNGNSSKVHECSI--CGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       205 ~~L~~H~~~H~~ekp~~C~~--Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      ..|..|++ |+|+|||.|.+  |||.|.+.++|..|+|+|+|++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34777875 99999999988  9999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=3.2e-11  Score=74.48  Aligned_cols=35  Identities=29%  Similarity=0.593  Sum_probs=32.8

Q ss_pred             cccCCCCCcccccCCCCCccCCchhHhhhhhhcCC
Q 045639          138 TGTGKGGCYVYECKTCNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       138 h~~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      |.++|+||+||+|.+||+.|.....|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            66799999999999999999999999999999964

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.2e-11  Score=70.64  Aligned_cols=29  Identities=24%  Similarity=0.563  Sum_probs=27.9

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |||.|.+|||+|.+.+.|..|+|+|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            79999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.9e-11  Score=74.16  Aligned_cols=34  Identities=29%  Similarity=0.488  Sum_probs=32.1

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      ++|+||+||+|.+|||+|.....|..|+++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4799999999999999999999999999999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=5.9e-11  Score=73.81  Aligned_cols=35  Identities=23%  Similarity=0.430  Sum_probs=32.5

Q ss_pred             CCcccccCCCCCccCCchhHhhhhh-hcCCCccccC
Q 045639          144 GCYVYECKTCNRTFPSFQALGGHRA-SHKKPKAMLM  178 (348)
Q Consensus       144 g~kpy~C~~Cgk~F~s~~~L~~H~~-~H~~~k~~~c  178 (348)
                      -+|||+|.+|||.|....+|..|++ +|+|+|||.|
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            3689999999999999999999975 7999999987

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=7.4e-11  Score=71.51  Aligned_cols=33  Identities=21%  Similarity=0.454  Sum_probs=31.0

Q ss_pred             CCCCCcccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          141 GKGGCYVYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       141 ~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      .|+||+||+|.+|+|.|.....|..|+++|++.
T Consensus         1 g~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            378999999999999999999999999999875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.90  E-value=3e-10  Score=65.84  Aligned_cols=29  Identities=31%  Similarity=0.611  Sum_probs=27.8

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +||.|.+|||.|.....|..|+++|+|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=1.6e-10  Score=64.67  Aligned_cols=26  Identities=35%  Similarity=0.611  Sum_probs=25.0

Q ss_pred             CceeccccCcccCChhHHHhHhhhcC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |||+|.+|||+|.+.+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999995

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=4.3e-10  Score=68.73  Aligned_cols=33  Identities=24%  Similarity=0.442  Sum_probs=29.3

Q ss_pred             cCCCCCcccccCCCCCccCCchhHhhhhhh-cCC
Q 045639          140 TGKGGCYVYECKTCNRTFPSFQALGGHRAS-HKK  172 (348)
Q Consensus       140 ~~h~g~kpy~C~~Cgk~F~s~~~L~~H~~~-H~~  172 (348)
                      ++|+||+||+|++||+.|....+|..|++. |.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            479999999999999999999999999754 543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=4.9e-10  Score=64.85  Aligned_cols=29  Identities=24%  Similarity=0.527  Sum_probs=27.8

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      |||.|.+|||+|...+.|..|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=2.7e-10  Score=65.30  Aligned_cols=28  Identities=25%  Similarity=0.529  Sum_probs=26.8

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCC
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      ||||+|.+|||.|.....|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=6e-10  Score=64.89  Aligned_cols=28  Identities=29%  Similarity=0.686  Sum_probs=27.0

Q ss_pred             Cceeccc--cCcccCChhHHHhHhhhcCCC
Q 045639          218 KVHECSI--CGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      |||.|.+  |||+|.+.+.|..|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            7999999  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=4.6e-10  Score=65.49  Aligned_cols=28  Identities=32%  Similarity=0.672  Sum_probs=26.8

Q ss_pred             Cceeccc--cCcccCChhHHHhHhhhcCCC
Q 045639          218 KVHECSI--CGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      |||.|++  |||+|.+.++|..|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            7999988  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.2e-09  Score=64.17  Aligned_cols=29  Identities=31%  Similarity=0.637  Sum_probs=27.1

Q ss_pred             Cceeccc--cCcccCChhHHHhHhhhcCCCC
Q 045639          218 KVHECSI--CGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |||.|++  |||+|.+.++|..|+|+|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6999964  9999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.72  E-value=1.5e-09  Score=70.33  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=33.1

Q ss_pred             cccCCCCCcccccCC--CCCccCCchhHhhhhhhcCCCc
Q 045639          138 TGTGKGGCYVYECKT--CNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       138 h~~~h~g~kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      |+ .|+|++||.|.+  |+|.|...++|..|+++|+|+|
T Consensus        10 h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          10 YV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            44 489999999987  9999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.3e-09  Score=60.90  Aligned_cols=26  Identities=27%  Similarity=0.589  Sum_probs=24.8

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcC
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      |||+|.+|||+|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=2.5e-09  Score=65.12  Aligned_cols=32  Identities=25%  Similarity=0.459  Sum_probs=30.4

Q ss_pred             eeccc--cCcccCChhHHHhHhhhcCCCCCCccc
Q 045639          220 HECSI--CGAEFTSGQALGGHMRRHRSAPVAATA  251 (348)
Q Consensus       220 ~~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~~~  251 (348)
                      |.|.+  ||+.|.+...|.+|||+|+|++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            78987  999999999999999999999999985

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=6.8e-09  Score=55.23  Aligned_cols=26  Identities=38%  Similarity=0.813  Sum_probs=24.9

Q ss_pred             ceeccccCcccCChhHHHhHhhhcCC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      |++|.+|||.|+++..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            68999999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=9e-09  Score=60.71  Aligned_cols=29  Identities=21%  Similarity=0.477  Sum_probs=27.2

Q ss_pred             CCceeccc--cCcccCChhHHHhHhhhcCCC
Q 045639          217 SKVHECSI--CGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       217 ekp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      ||||.|.+  |||+|.+.++|.+|+|+|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            69999998  999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=6.1e-09  Score=59.99  Aligned_cols=27  Identities=26%  Similarity=0.645  Sum_probs=25.8

Q ss_pred             Cceeccc--cCcccCChhHHHhHhhhcCC
Q 045639          218 KVHECSI--CGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      |||.|.+  |||+|.+.++|..|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            7999988  99999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.6e-08  Score=58.65  Aligned_cols=28  Identities=21%  Similarity=0.488  Sum_probs=26.6

Q ss_pred             cccccCC--CCCccCCchhHhhhhhhcCCC
Q 045639          146 YVYECKT--CNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       146 kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      |||.|.+  |||.|.....|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=9.3e-09  Score=62.52  Aligned_cols=31  Identities=19%  Similarity=0.513  Sum_probs=29.0

Q ss_pred             cccCC--CCCccCCchhHhhhhhhcCCCccccC
Q 045639          148 YECKT--CNRTFPSFQALGGHRASHKKPKAMLM  178 (348)
Q Consensus       148 y~C~~--Cgk~F~s~~~L~~H~~~H~~~k~~~c  178 (348)
                      |.|..  |||.|.....|.+|+++|+|++||.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            67876  99999999999999999999999987

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=1.6e-08  Score=57.56  Aligned_cols=26  Identities=23%  Similarity=0.579  Sum_probs=24.8

Q ss_pred             Cceeccc--cCcccCChhHHHhHhhhcC
Q 045639          218 KVHECSI--CGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |||.|++  |||+|.+.++|.+|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999998  9999999999999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.5e-08  Score=58.86  Aligned_cols=28  Identities=21%  Similarity=0.387  Sum_probs=26.4

Q ss_pred             cccccCC--CCCccCCchhHhhhhhhcCCC
Q 045639          146 YVYECKT--CNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       146 kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      |||.|.+  |||.|....+|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899988  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=4.5e-08  Score=57.30  Aligned_cols=29  Identities=24%  Similarity=0.551  Sum_probs=26.7

Q ss_pred             cccccC--CCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECK--TCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~--~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +||.|+  .|||.|....+|..|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            589996  59999999999999999999986

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.44  E-value=4.4e-08  Score=58.77  Aligned_cols=30  Identities=50%  Similarity=0.862  Sum_probs=27.5

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCCCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      .+.|+|.+|++.|.+.++|++||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            367999999999999999999999998765

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.44  E-value=4.7e-08  Score=53.68  Aligned_cols=27  Identities=30%  Similarity=0.619  Sum_probs=25.8

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      ||||.|.+||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            699999999999999999999999995

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=7.1e-08  Score=51.24  Aligned_cols=26  Identities=23%  Similarity=0.501  Sum_probs=24.5

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcCC
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      |++|++|+|+|..+..|+.|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.31  E-value=1.7e-07  Score=55.07  Aligned_cols=29  Identities=28%  Similarity=0.573  Sum_probs=26.8

Q ss_pred             CcccccCC--CCCccCCchhHhhhhhhcCCC
Q 045639          145 CYVYECKT--CNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       145 ~kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      |+||.|.+  |||.|....+|..|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999864

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.28  E-value=1.5e-07  Score=56.47  Aligned_cols=29  Identities=45%  Similarity=0.872  Sum_probs=26.7

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +.|+|.+|+|.|.+.++|++|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            57999999999999999999999997665

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.24  E-value=1.2e-07  Score=54.45  Aligned_cols=27  Identities=30%  Similarity=0.560  Sum_probs=25.3

Q ss_pred             cccccCC--CCCccCCchhHhhhhhhcCC
Q 045639          146 YVYECKT--CNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       146 kpy~C~~--Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      |||.|.+  |||.|....+|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=3.5e-07  Score=51.86  Aligned_cols=26  Identities=31%  Similarity=0.594  Sum_probs=24.3

Q ss_pred             cccccCC--CCCccCCchhHhhhhhhcC
Q 045639          146 YVYECKT--CNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       146 kpy~C~~--Cgk~F~s~~~L~~H~~~H~  171 (348)
                      +||.|..  |||.|....+|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899988  9999999999999999985

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=5.5e-07  Score=50.11  Aligned_cols=29  Identities=28%  Similarity=0.650  Sum_probs=27.5

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      ||||.|.+|+..|.++..+.-|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            69999999999999999999999999875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1.1e-06  Score=50.04  Aligned_cols=32  Identities=28%  Similarity=0.420  Sum_probs=29.7

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCCCCCCc
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRSAPVAA  249 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~  249 (348)
                      |...|.+|||.|.....|.+|.-.|.+++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            56889999999999999999999999999874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=9.2e-07  Score=50.32  Aligned_cols=32  Identities=25%  Similarity=0.463  Sum_probs=29.4

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcCCCcccc
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHKKPKAML  177 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~~~k~~~  177 (348)
                      +...|..|||.|.....|.+|+.+|+++|||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45689999999999999999999999999983

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2e-06  Score=46.47  Aligned_cols=27  Identities=33%  Similarity=0.635  Sum_probs=25.4

Q ss_pred             ceeccccCcccCChhHHHhHhhhcCCC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      .+.|..|||.|...+.|++|.-+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            578999999999999999999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=1.6e-06  Score=47.45  Aligned_cols=27  Identities=22%  Similarity=0.429  Sum_probs=25.4

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcC
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      |+||.|++||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999985

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=4e-06  Score=45.53  Aligned_cols=29  Identities=24%  Similarity=0.492  Sum_probs=27.2

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      |+||+|.+|...-...+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            68999999999999999999999999985

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=6.7e-06  Score=44.40  Aligned_cols=27  Identities=26%  Similarity=0.490  Sum_probs=24.9

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      .+.|.+|||+|...+.|++|..+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            467999999999999999999999985

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=7e-06  Score=45.53  Aligned_cols=27  Identities=22%  Similarity=0.506  Sum_probs=24.7

Q ss_pred             Cceeccc--cCcccCChhHHHhHhhhcCC
Q 045639          218 KVHECSI--CGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      |||.|.+  |+|+|...+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6999988  99999999999999998764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=9.8e-06  Score=43.08  Aligned_cols=26  Identities=35%  Similarity=0.579  Sum_probs=24.7

Q ss_pred             eccccCcccCChhHHHhHhhhcCCCC
Q 045639          221 ECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       221 ~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      +|++|.|.|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.67  E-value=1.5e-05  Score=41.72  Aligned_cols=24  Identities=33%  Similarity=0.729  Sum_probs=22.9

Q ss_pred             eeccccCcccCChhHHHhHhhhcC
Q 045639          220 HECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |+|..|.++|..+++|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999985

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=8.4e-06  Score=45.22  Aligned_cols=29  Identities=24%  Similarity=0.407  Sum_probs=27.0

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      |+||.|++|+..|..+..+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999774

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.2e-05  Score=48.26  Aligned_cols=26  Identities=27%  Similarity=0.531  Sum_probs=23.7

Q ss_pred             CCCCceeccccCcccCChhHHHhHhh
Q 045639          215 NSSKVHECSICGAEFTSGQALGGHMR  240 (348)
Q Consensus       215 ~~ekp~~C~~Cgk~F~~~~~L~~H~r  240 (348)
                      +|-|||+|.+|||.|.....+.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57899999999999999999999963

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.2e-05  Score=42.56  Aligned_cols=29  Identities=21%  Similarity=0.291  Sum_probs=26.9

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      ++||+|..|..+-...+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999999999999999999974

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.50  E-value=3.3e-05  Score=40.37  Aligned_cols=25  Identities=40%  Similarity=0.809  Sum_probs=23.3

Q ss_pred             cccCCCCCccCCchhHhhhhhhcCC
Q 045639          148 YECKTCNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       148 y~C~~Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      |+|..|.+.|..+++|.+|+++|.+
T Consensus         1 ykcglcersfveksalsrhqrvhkn   25 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHKN   25 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhcc
Confidence            7899999999999999999999963

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=4.1e-05  Score=40.65  Aligned_cols=26  Identities=38%  Similarity=0.581  Sum_probs=24.6

Q ss_pred             ccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          149 ECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       149 ~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      +|+.|.|.|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999985

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=5.7e-05  Score=40.54  Aligned_cols=27  Identities=26%  Similarity=0.501  Sum_probs=25.3

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      .|||+|..|...-...+.|..|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            389999999999999999999999996

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=6.7e-05  Score=40.81  Aligned_cols=27  Identities=26%  Similarity=0.469  Sum_probs=25.6

Q ss_pred             eeccccCcccCChhHHHhHhhhcCCCC
Q 045639          220 HECSICGAEFTSGQALGGHMRRHRSAP  246 (348)
Q Consensus       220 ~~C~~Cgk~F~~~~~L~~H~r~H~~~~  246 (348)
                      |.|..||......+-|..|.|.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            889999999999999999999999874

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.31  E-value=6.9e-05  Score=40.74  Aligned_cols=29  Identities=31%  Similarity=0.571  Sum_probs=27.2

Q ss_pred             CCceeccccCcccCChhHHHhHhhhcCCC
Q 045639          217 SKVHECSICGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       217 ekp~~C~~Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      |..|.|++|...|.++-.|+.||..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56899999999999999999999999985

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.16  E-value=0.0001  Score=41.17  Aligned_cols=26  Identities=27%  Similarity=0.496  Sum_probs=22.9

Q ss_pred             ceeccccCcccCChhHHHhHhh-hcCC
Q 045639          219 VHECSICGAEFTSGQALGGHMR-RHRS  244 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r-~H~~  244 (348)
                      ||.|.+|++.|+++.-|.+|.. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999954 5655

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00013  Score=39.63  Aligned_cols=27  Identities=22%  Similarity=0.417  Sum_probs=25.4

Q ss_pred             cccCCCCCccCCchhHhhhhhhcCCCc
Q 045639          148 YECKTCNRTFPSFQALGGHRASHKKPK  174 (348)
Q Consensus       148 y~C~~Cgk~F~s~~~L~~H~~~H~~~k  174 (348)
                      |.|..||......+-|..|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            889999999999999999999999874

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=9.7e-05  Score=39.61  Aligned_cols=26  Identities=31%  Similarity=0.547  Sum_probs=24.7

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcC
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      +||+|+.|...-...+.|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999995

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.05  E-value=0.00012  Score=39.70  Aligned_cols=25  Identities=28%  Similarity=0.478  Sum_probs=22.9

Q ss_pred             Cceeccc--cCcccCChhHHHhHhhhc
Q 045639          218 KVHECSI--CGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~r~H  242 (348)
                      .||+|+.  |++.|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899976  999999999999999987

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00012  Score=40.84  Aligned_cols=28  Identities=25%  Similarity=0.494  Sum_probs=25.0

Q ss_pred             Cceeccc--cCcccCChhHHHhHh-hhcCCC
Q 045639          218 KVHECSI--CGAEFTSGQALGGHM-RRHRSA  245 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~-r~H~~~  245 (348)
                      |||.|.+  |.|.|+..+.-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6999988  999999999999997 888753

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00024  Score=42.48  Aligned_cols=26  Identities=27%  Similarity=0.534  Sum_probs=23.4

Q ss_pred             CCCcccccCCCCCccCCchhHhhhhh
Q 045639          143 GGCYVYECKTCNRTFPSFQALGGHRA  168 (348)
Q Consensus       143 ~g~kpy~C~~Cgk~F~s~~~L~~H~~  168 (348)
                      +|.|||+|..|+|.|.-...+.+|+.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47799999999999999999999964

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.81  E-value=0.00021  Score=38.71  Aligned_cols=25  Identities=32%  Similarity=0.672  Sum_probs=22.7

Q ss_pred             cccccCC--CCCccCCchhHhhhhhhc
Q 045639          146 YVYECKT--CNRTFPSFQALGGHRASH  170 (348)
Q Consensus       146 kpy~C~~--Cgk~F~s~~~L~~H~~~H  170 (348)
                      .||+|..  |+|.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899976  999999999999999887

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.76  E-value=0.00024  Score=38.68  Aligned_cols=28  Identities=29%  Similarity=0.637  Sum_probs=25.0

Q ss_pred             cccccCC--CCCccCCchhHhhhhhhcCCC
Q 045639          146 YVYECKT--CNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       146 kpy~C~~--Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      +||.|..  |.|.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788876  999999999999999999875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.57  E-value=0.00053  Score=37.14  Aligned_cols=29  Identities=31%  Similarity=0.481  Sum_probs=26.9

Q ss_pred             CcccccCCCCCccCCchhHhhhhhhcCCC
Q 045639          145 CYVYECKTCNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       145 ~kpy~C~~Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      +..|.|..|...|...-.|..|+.+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            46899999999999999999999999985

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.0006  Score=37.57  Aligned_cols=27  Identities=22%  Similarity=0.465  Sum_probs=22.5

Q ss_pred             cccccCC--CCCccCCchhHhhhhhhcCC
Q 045639          146 YVYECKT--CNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       146 kpy~C~~--Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      +||.|..  |+|.+...+.|..|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5888887  89999999999999887543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00089  Score=36.30  Aligned_cols=24  Identities=25%  Similarity=0.555  Sum_probs=22.2

Q ss_pred             ceeccccCcccCChhHHHhHhhhc
Q 045639          219 VHECSICGAEFTSGQALGGHMRRH  242 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H  242 (348)
                      ||.|..|+.+|..+.+|..||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999853

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.45  E-value=0.00053  Score=37.28  Aligned_cols=28  Identities=32%  Similarity=0.444  Sum_probs=25.4

Q ss_pred             Cceeccc--cCcccCChhHHHhHhhhcCCC
Q 045639          218 KVHECSI--CGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      |||.|..  |.|.|.+-..|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            6899976  999999999999999999885

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.00079  Score=39.60  Aligned_cols=28  Identities=32%  Similarity=0.657  Sum_probs=25.4

Q ss_pred             CCCceeccc--cCcccCChhHHHhHhhhcC
Q 045639          216 SSKVHECSI--CGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       216 ~ekp~~C~~--Cgk~F~~~~~L~~H~r~H~  243 (348)
                      .+|||.|.+  |+.+|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            489999966  9999999999999998884

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.0014  Score=35.73  Aligned_cols=26  Identities=19%  Similarity=0.451  Sum_probs=23.4

Q ss_pred             CceeccccCcccCChhHHHhHhhhcC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |||.|..|...-...++|+.|.++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            69999999999999999999988643

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.0015  Score=35.57  Aligned_cols=28  Identities=25%  Similarity=0.452  Sum_probs=24.1

Q ss_pred             cccccCCCCCccCCchhHhhhhhh-cCCC
Q 045639          146 YVYECKTCNRTFPSFQALGGHRAS-HKKP  173 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~-H~~~  173 (348)
                      +||.|..|...-...++|+.|+++ |.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            589999999999999999999886 5544

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.00093  Score=37.15  Aligned_cols=27  Identities=22%  Similarity=0.598  Sum_probs=23.0

Q ss_pred             cccccCC--CCCccCCchhHhhhh-hhcCC
Q 045639          146 YVYECKT--CNRTFPSFQALGGHR-ASHKK  172 (348)
Q Consensus       146 kpy~C~~--Cgk~F~s~~~L~~H~-~~H~~  172 (348)
                      +||.|..  |+|+|...+.-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5889987  999999999999996 78864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.10  E-value=0.0013  Score=36.56  Aligned_cols=26  Identities=35%  Similarity=0.584  Sum_probs=22.5

Q ss_pred             ccccCCCCCccCCchhHhhhhh-hcCC
Q 045639          147 VYECKTCNRTFPSFQALGGHRA-SHKK  172 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~-~H~~  172 (348)
                      ||.|.+|++.|....-|.+|.. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999965 4654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0011  Score=35.93  Aligned_cols=23  Identities=35%  Similarity=0.593  Sum_probs=21.6

Q ss_pred             ccccCCCCCccCCchhHhhhhhh
Q 045639          147 VYECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      ||.|..|+..|..+.+|..|+.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            78999999999999999999986

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0016  Score=35.35  Aligned_cols=27  Identities=19%  Similarity=0.523  Sum_probs=23.5

Q ss_pred             CceeccccCcccCChhHHHhHhhhcCC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      +||+|+.|..--.+.++|..|++.-+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            699999999999999999999876443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.80  E-value=0.0024  Score=33.94  Aligned_cols=23  Identities=26%  Similarity=0.560  Sum_probs=20.7

Q ss_pred             ccccCCCCCccCCchhHhhhhhh
Q 045639          147 VYECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      ||+|..|||.+..+.+|..|.+.
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68999999999999999999753

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.74  E-value=0.0026  Score=33.83  Aligned_cols=23  Identities=30%  Similarity=0.524  Sum_probs=20.7

Q ss_pred             ceeccccCcccCChhHHHhHhhh
Q 045639          219 VHECSICGAEFTSGQALGGHMRR  241 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~  241 (348)
                      ||+|..|||.|-++.+|..|..+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999643

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.52  E-value=0.0032  Score=32.62  Aligned_cols=22  Identities=32%  Similarity=0.614  Sum_probs=20.9

Q ss_pred             ceeccccCcccCChhHHHhHhh
Q 045639          219 VHECSICGAEFTSGQALGGHMR  240 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r  240 (348)
                      ||+|+-|...|.++..|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999985

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.0058  Score=35.80  Aligned_cols=28  Identities=21%  Similarity=0.492  Sum_probs=24.1

Q ss_pred             CCcccccCC--CCCccCCchhHhhhhhhcC
Q 045639          144 GCYVYECKT--CNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       144 g~kpy~C~~--Cgk~F~s~~~L~~H~~~H~  171 (348)
                      .+|||.|..  |+..|.+...|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            378999955  9999999999999988774

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.01  Score=31.66  Aligned_cols=26  Identities=35%  Similarity=0.447  Sum_probs=23.6

Q ss_pred             ceeccccCcccCChhHHHhHhhhcCC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      |-+|+.|..+.+.+.+|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            57899999999999999999999953

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.72  E-value=0.0082  Score=31.16  Aligned_cols=23  Identities=30%  Similarity=0.609  Sum_probs=21.0

Q ss_pred             ceeccccCcccCChhHHHhHhhh
Q 045639          219 VHECSICGAEFTSGQALGGHMRR  241 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~  241 (348)
                      .|.|++|-|.|.++.++..|.++
T Consensus         1 vypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCchhhHHhccccCceEEEEE
Confidence            38899999999999999999875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.68  E-value=0.0071  Score=37.26  Aligned_cols=26  Identities=31%  Similarity=0.675  Sum_probs=23.4

Q ss_pred             CceeccccCcccCChhHHHhHhhhcC
Q 045639          218 KVHECSICGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~H~  243 (348)
                      -.|.|.+|||.|.....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999998884

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.45  E-value=0.0074  Score=34.56  Aligned_cols=20  Identities=35%  Similarity=0.378  Sum_probs=18.0

Q ss_pred             CcccCChhHHHhHhhhcCCC
Q 045639          226 GAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       226 gk~F~~~~~L~~H~r~H~~~  245 (348)
                      ++.|.....|..|||+|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            56799999999999999986

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.012  Score=33.33  Aligned_cols=26  Identities=27%  Similarity=0.552  Sum_probs=22.9

Q ss_pred             ceeccccCcccCChhHHHhHhhhcCC
Q 045639          219 VHECSICGAEFTSGQALGGHMRRHRS  244 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~H~~  244 (348)
                      .|.|+.|||.|.++..+.+|-..-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48999999999999999999776655

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.18  E-value=0.0098  Score=30.75  Aligned_cols=22  Identities=27%  Similarity=0.664  Sum_probs=20.0

Q ss_pred             ccccCCCCCccCCchhHhhhhh
Q 045639          147 VYECKTCNRTFPSFQALGGHRA  168 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~  168 (348)
                      ||+|..|...|..+..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.016  Score=30.91  Aligned_cols=25  Identities=28%  Similarity=0.357  Sum_probs=22.8

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcC
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      |-+|..|.....++.+|..|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5589999999999999999999994

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.33  E-value=0.017  Score=35.51  Aligned_cols=26  Identities=27%  Similarity=0.560  Sum_probs=23.6

Q ss_pred             cccccCCCCCccCCchhHhhhhhhcC
Q 045639          146 YVYECKTCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      -.|.|..|||.|.....|..|.+.|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            36899999999999999999999883

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.90  E-value=0.022  Score=31.24  Aligned_cols=28  Identities=32%  Similarity=0.661  Sum_probs=25.0

Q ss_pred             Cceeccc--cCcccCChhHHHhHhhhcCCC
Q 045639          218 KVHECSI--CGAEFTSGQALGGHMRRHRSA  245 (348)
Q Consensus       218 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  245 (348)
                      |.|.|+.  |+..|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            5688876  999999999999999999986

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.34  E-value=0.045  Score=28.30  Aligned_cols=23  Identities=26%  Similarity=0.560  Sum_probs=20.6

Q ss_pred             ccccCCCCCccCCchhHhhhhhh
Q 045639          147 VYECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      .|.|+.|-|.|..+.++..|.++
T Consensus         1 vypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCchhhHHhccccCceEEEEE
Confidence            48899999999999999999875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.28  E-value=0.039  Score=31.44  Aligned_cols=21  Identities=24%  Similarity=0.108  Sum_probs=18.1

Q ss_pred             CCCccCCchhHhhhhhhcCCC
Q 045639          153 CNRTFPSFQALGGHRASHKKP  173 (348)
Q Consensus       153 Cgk~F~s~~~L~~H~~~H~~~  173 (348)
                      =++.|.....|..|+|+|+||
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            346699999999999999986

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.82  E-value=0.042  Score=29.60  Aligned_cols=24  Identities=17%  Similarity=0.322  Sum_probs=21.0

Q ss_pred             cccccCCCCCccCCchhHhhhhhh
Q 045639          146 YVYECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       146 kpy~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      +||+|..|.---...++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            589999999888899999999864

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.77  E-value=0.064  Score=28.38  Aligned_cols=23  Identities=26%  Similarity=0.613  Sum_probs=21.2

Q ss_pred             ceeccccCcccCChhHHHhHhhh
Q 045639          219 VHECSICGAEFTSGQALGGHMRR  241 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r~  241 (348)
                      .|.|+.|+....+++.|+.|+|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48999999999999999999984

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.24  E-value=0.075  Score=28.28  Aligned_cols=19  Identities=26%  Similarity=0.583  Sum_probs=17.8

Q ss_pred             cCcccCChhHHHhHhhhcC
Q 045639          225 CGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       225 Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |+|.|...++++.|+.+|-
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            9999999999999998884

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.14  E-value=0.079  Score=29.84  Aligned_cols=26  Identities=19%  Similarity=0.547  Sum_probs=22.0

Q ss_pred             ccccCCCCCccCCchhHhhhhhhcCC
Q 045639          147 VYECKTCNRTFPSFQALGGHRASHKK  172 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~H~~  172 (348)
                      .|.|..|||.|.....+.+|...-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58899999999999999999765544

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.05  E-value=0.089  Score=27.60  Aligned_cols=24  Identities=29%  Similarity=0.545  Sum_probs=20.4

Q ss_pred             eeccc--cCcccCChhHHHhHhhhcC
Q 045639          220 HECSI--CGAEFTSGQALGGHMRRHR  243 (348)
Q Consensus       220 ~~C~~--Cgk~F~~~~~L~~H~r~H~  243 (348)
                      |.|..  |||.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            66644  9999999999999988875

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.57  E-value=0.16  Score=28.31  Aligned_cols=22  Identities=32%  Similarity=0.576  Sum_probs=20.3

Q ss_pred             ceeccccCcccCChhHHHhHhh
Q 045639          219 VHECSICGAEFTSGQALGGHMR  240 (348)
Q Consensus       219 p~~C~~Cgk~F~~~~~L~~H~r  240 (348)
                      .|.|.-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4899999999999999999975

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.71  E-value=0.11  Score=27.30  Aligned_cols=24  Identities=33%  Similarity=0.746  Sum_probs=19.3

Q ss_pred             cccC--CCCCccCCchhHhhhhhhcC
Q 045639          148 YECK--TCNRTFPSFQALGGHRASHK  171 (348)
Q Consensus       148 y~C~--~Cgk~F~s~~~L~~H~~~H~  171 (348)
                      |.|.  -|+|.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            4554  49999999999999988774

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.44  E-value=0.24  Score=27.90  Aligned_cols=26  Identities=15%  Similarity=0.372  Sum_probs=22.5

Q ss_pred             CCCceeccccCcccCChhHHHhHhhh
Q 045639          216 SSKVHECSICGAEFTSGQALGGHMRR  241 (348)
Q Consensus       216 ~ekp~~C~~Cgk~F~~~~~L~~H~r~  241 (348)
                      |+..|.|.+|.+.|..-+++-+|--+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            45679999999999999999999654

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.68  E-value=0.28  Score=25.82  Aligned_cols=23  Identities=22%  Similarity=0.525  Sum_probs=20.5

Q ss_pred             ccccCCCCCccCCchhHhhhhhh
Q 045639          147 VYECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      .|.|+.|+-....++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            37899999999999999999874

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.18  E-value=0.26  Score=27.73  Aligned_cols=28  Identities=32%  Similarity=0.730  Sum_probs=23.5

Q ss_pred             CCcccccCCCCCccCCchhHhhhhhh-cC
Q 045639          144 GCYVYECKTCNRTFPSFQALGGHRAS-HK  171 (348)
Q Consensus       144 g~kpy~C~~Cgk~F~s~~~L~~H~~~-H~  171 (348)
                      |+..|.|..|.+.+...+++-+|-.+ |.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            45689999999999999999999653 53

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.91  E-value=0.51  Score=28.60  Aligned_cols=27  Identities=26%  Similarity=0.463  Sum_probs=24.1

Q ss_pred             CCCCceeccccCcccCChhHHHhHhhh
Q 045639          215 NSSKVHECSICGAEFTSGQALGGHMRR  241 (348)
Q Consensus       215 ~~ekp~~C~~Cgk~F~~~~~L~~H~r~  241 (348)
                      ..+.|-.|.+|+....+..+|++|+..
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            457899999999999999999999764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.42  E-value=0.26  Score=32.85  Aligned_cols=24  Identities=29%  Similarity=0.630  Sum_probs=21.4

Q ss_pred             CceeccccCcccCChhHHHhHhhh
Q 045639          218 KVHECSICGAEFTSGQALGGHMRR  241 (348)
Q Consensus       218 kp~~C~~Cgk~F~~~~~L~~H~r~  241 (348)
                      --|-|-+|+|.|.+...|..|++.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            348999999999999999999874

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=80.46  E-value=0.45  Score=26.34  Aligned_cols=23  Identities=30%  Similarity=0.566  Sum_probs=20.5

Q ss_pred             ccccCCCCCccCCchhHhhhhhh
Q 045639          147 VYECKTCNRTFPSFQALGGHRAS  169 (348)
Q Consensus       147 py~C~~Cgk~F~s~~~L~~H~~~  169 (348)
                      .|.|.-||-.|.+.+.|..|+.-
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            58999999999999999999763