Citrus Sinensis ID: 045750
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 792 | 2.2.26 [Sep-21-2011] | |||||||
| P0ABB8 | 898 | Magnesium-transporting AT | N/A | no | 0.962 | 0.848 | 0.427 | 1e-180 | |
| P0ABB9 | 898 | Magnesium-transporting AT | N/A | no | 0.962 | 0.848 | 0.427 | 1e-180 | |
| P36640 | 902 | Magnesium-transporting AT | yes | no | 0.963 | 0.845 | 0.420 | 1e-178 | |
| D0ZTB2 | 902 | Magnesium-transporting AT | yes | no | 0.963 | 0.845 | 0.420 | 1e-178 | |
| P22036 | 908 | Magnesium-transporting AT | no | no | 0.977 | 0.852 | 0.415 | 1e-176 | |
| O59868 | 899 | Calcium-transporting ATPa | yes | no | 0.747 | 0.658 | 0.292 | 1e-71 | |
| O43108 | 928 | Calcium-transporting ATPa | yes | no | 0.878 | 0.75 | 0.277 | 1e-68 | |
| P37278 | 926 | Probable calcium-transpor | yes | no | 0.760 | 0.650 | 0.281 | 1e-67 | |
| Q58623 | 805 | Putative cation-transport | yes | no | 0.849 | 0.836 | 0.271 | 9e-64 | |
| P63687 | 905 | Probable cation-transport | yes | no | 0.763 | 0.668 | 0.281 | 8e-63 |
| >sp|P0ABB8|ATMA_ECOLI Magnesium-transporting ATPase, P-type 1 OS=Escherichia coli (strain K12) GN=mgtA PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 631 bits (1627), Expect = e-180, Method: Compositional matrix adjust.
Identities = 335/784 (42%), Positives = 485/784 (61%), Gaps = 22/784 (2%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAG-RVVQSELIVQVDQRDVVPGDI 62
+V IS L F QE S+KAA L V V R + L + +DQ +VPGDI
Sbjct: 127 MVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQ--LVPGDI 184
Query: 63 VIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIRE-DHCTPLLDLKNICFMG 121
+ GD+ P D+R+L ++ L V+Q+SLTGES EK A R+ +H PL + +CFMG
Sbjct: 185 IKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKAATTRQPEHSNPL-ECDTLCFMG 243
Query: 122 TNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKP-PDDFEKGVRRISFVLICVMLIVATII 180
T VVSG+ +V++TG+ T+ + + +Q+ P+ F++G+ R+S +LI ML++A ++
Sbjct: 244 TTVVSGTAQAMVIATGANTWFGQLAGRVSEQESEPNAFQQGISRVSMLLIRFMLVMAPVV 303
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
+LI+ +T + E+ LF +SVA LTP+M P+IV ++LA+GA+ +++ + +VK L AI++
Sbjct: 304 LLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQN 363
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
G MDILC DKTGTLT D+ ++ NH D G E VL A+LNS+Y+T K LD A+L
Sbjct: 364 FGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLE 423
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
R AS+W+K+DEIPFDF RR++SV++ TE ++ KGAL+E+
Sbjct: 424 GTDEESARSLASRWQKIDEIPFDFERRRMSVVVAEN--TEHHQ-------LVCKGALQEI 474
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
+ VCS V H +G I ++I + + L+ +GLRV+ VA K LP + R D
Sbjct: 475 LNVCSQVRH--NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATK-YLPAREGDYQRAD 531
Query: 421 GPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480
ESD++ G I F DPPK++ AL L G+ K+LTGDS +A K+CHEVG+
Sbjct: 532 ---ESDLILEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAG 588
Query: 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSL 540
V G D+E LS + +R T+ ARLTP K R+V L+ G HVVGF+GDGIND+
Sbjct: 589 EVVIGSDIETLSDDELANLAQRTTLFARLTPMHKERIVTLLKREG-HVVGFMGDGINDAP 647
Query: 541 ALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANL 600
AL AA++GISVD +A++ ADIILLEK L VL GV GR TF N +KYIKM+ +N
Sbjct: 648 ALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNF 707
Query: 601 GGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGLPM 660
G V S+L+A+ FL P+ P LL QN LY V Q+AIP+D ++ + ++ PQ W+ L
Sbjct: 708 GNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGR 767
Query: 661 FILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIP 720
F++F GP+ + D+ +W+ + A F+S WFV GLL QTLI+H+IRT ++P
Sbjct: 768 FMIFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRVP 827
Query: 721 FIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLV 780
FIQ ASWP++ T+++ +GIA+PF+ + + LPL+YF +L+ + GY T+ QLV
Sbjct: 828 FIQSCASWPLMIMTVIVMIVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLV 887
Query: 781 KRIY 784
K Y
Sbjct: 888 KGFY 891
|
Mediates magnesium influx to the cytosol. Escherichia coli (strain K12) (taxid: 83333) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 2 |
| >sp|P0ABB9|ATMA_ECO57 Magnesium-transporting ATPase, P-type 1 OS=Escherichia coli O157:H7 GN=mgtA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 631 bits (1627), Expect = e-180, Method: Compositional matrix adjust.
Identities = 335/784 (42%), Positives = 485/784 (61%), Gaps = 22/784 (2%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAG-RVVQSELIVQVDQRDVVPGDI 62
+V IS L F QE S+KAA L V V R + L + +DQ +VPGDI
Sbjct: 127 MVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQ--LVPGDI 184
Query: 63 VIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIRE-DHCTPLLDLKNICFMG 121
+ GD+ P D+R+L ++ L V+Q+SLTGES EK A R+ +H PL + +CFMG
Sbjct: 185 IKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKAATTRQPEHSNPL-ECDTLCFMG 243
Query: 122 TNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKP-PDDFEKGVRRISFVLICVMLIVATII 180
T VVSG+ +V++TG+ T+ + + +Q+ P+ F++G+ R+S +LI ML++A ++
Sbjct: 244 TTVVSGTAQAMVIATGANTWFGQLAGRVSEQESEPNAFQQGISRVSMLLIRFMLVMAPVV 303
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
+LI+ +T + E+ LF +SVA LTP+M P+IV ++LA+GA+ +++ + +VK L AI++
Sbjct: 304 LLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQN 363
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
G MDILC DKTGTLT D+ ++ NH D G E VL A+LNS+Y+T K LD A+L
Sbjct: 364 FGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLE 423
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
R AS+W+K+DEIPFDF RR++SV++ TE ++ KGAL+E+
Sbjct: 424 GTDEESARSLASRWQKIDEIPFDFERRRMSVVVAEN--TEHHQ-------LVCKGALQEI 474
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
+ VCS V H +G I ++I + + L+ +GLRV+ VA K LP + R D
Sbjct: 475 LNVCSQVRH--NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATK-YLPAREGDYQRAD 531
Query: 421 GPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480
ESD++ G I F DPPK++ AL L G+ K+LTGDS +A K+CHEVG+
Sbjct: 532 ---ESDLILEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAG 588
Query: 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSL 540
V G D+E LS + +R T+ ARLTP K R+V L+ G HVVGF+GDGIND+
Sbjct: 589 EVVIGSDIETLSDDELANLAQRTTLFARLTPMHKERIVTLLKREG-HVVGFMGDGINDAP 647
Query: 541 ALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANL 600
AL AA++GISVD +A++ ADIILLEK L VL GV GR TF N +KYIKM+ +N
Sbjct: 648 ALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNF 707
Query: 601 GGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGLPM 660
G V S+L+A+ FL P+ P LL QN LY V Q+AIP+D ++ + ++ PQ W+ L
Sbjct: 708 GNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGR 767
Query: 661 FILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIP 720
F++F GP+ + D+ +W+ + A F+S WFV GLL QTLI+H+IRT ++P
Sbjct: 768 FMIFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRVP 827
Query: 721 FIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLV 780
FIQ ASWP++ T+++ +GIA+PF+ + + LPL+YF +L+ + GY T+ QLV
Sbjct: 828 FIQSCASWPLMIMTVIVMIVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLV 887
Query: 781 KRIY 784
K Y
Sbjct: 888 KGFY 891
|
Mediates magnesium influx to the cytosol. Escherichia coli O157:H7 (taxid: 83334) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 2 |
| >sp|P36640|ATMA_SALTY Magnesium-transporting ATPase, P-type 1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=mgtA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 624 bits (1609), Expect = e-178, Method: Compositional matrix adjust.
Identities = 329/783 (42%), Positives = 486/783 (62%), Gaps = 20/783 (2%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSE-LIVQVDQRDVVPGDI 62
+V IS L F QE S+KAA L V V R ++ L + +DQ +VPGDI
Sbjct: 131 MVGISTLLNFVQEARSTKAADALKAMVSNTATVLRVINENGENAWLELPIDQ--LVPGDI 188
Query: 63 VIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGT 122
+ GD+ P D+R++ ++ L V+Q+SLTGES EK A RE L+ +CFMGT
Sbjct: 189 IKLAAGDMIPADLRIIQARDLFVAQASLTGESLPVEKVAATREPRQNNPLECDTLCFMGT 248
Query: 123 NVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDD-FEKGVRRISFVLICVMLIVATIII 181
NVVSG+ +V++TG+ T+ + + +Q + F+KG+ R+S +LI ML++A +++
Sbjct: 249 NVVSGTAQAVVMATGAGTWFGQLAGRVSEQDNEQNAFQKGISRVSMLLIRFMLVMAPVVL 308
Query: 182 LIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241
+I+ +T + E+ LF +SVA LTP+M P+IV ++LA+GA+ +++ + +VK L AI++
Sbjct: 309 IINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNF 368
Query: 242 GTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAY 301
G MDILC DKTGTLT D+ ++ NH D G P E+VL A+LNS+Y+T K LD A+L
Sbjct: 369 GAMDILCTDKTGTLTQDKIVLENHTDISGKPSEHVLHCAWLNSHYQTGLKNLLDTAVLEG 428
Query: 302 VYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVI 361
V R + +W+K+DEIPFDF RR++SV++ +S ++ KGAL+E++
Sbjct: 429 VDETAARQLSGRWQKIDEIPFDFERRRMSVVVAEDSNVHQ---------LVCKGALQEIL 479
Query: 362 KVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDG 421
VC+ V H +G I +R+ + + L+ +GLRV+ VA K LP + R D
Sbjct: 480 NVCTQVRH--NGDIVPLDDNMLRRVKRVTDTLNRQGLRVVAVATK-YLPAREGDYQRID- 535
Query: 422 PIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH 481
ESD++ G I F DPPK++ AL L G+ K+LTGDS +A K+CHEVG+
Sbjct: 536 --ESDLILEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGD 593
Query: 482 VSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLA 541
V G D+E LS ++ R T+ ARLTP K R+V L+ G HVVGF+GDGIND+ A
Sbjct: 594 VIIGSDIEGLSDDALAALAARTTLFARLTPMHKERIVTLLKREG-HVVGFMGDGINDAPA 652
Query: 542 LDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLG 601
L AA++GISVD +A++ ADIILLEK L VL GV GR TF N +KYIKM+ +N G
Sbjct: 653 LRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFSNMLKYIKMTASSNFG 712
Query: 602 GVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGLPMF 661
V S+L+A+ FL P+ P LL QN LY V Q+AIP+D ++ + ++ PQ W+ L F
Sbjct: 713 NVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDEEQIQKPQRWNPADLGRF 772
Query: 662 ILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIPF 721
++F GP+ + D+ +W+ + A F+S WFV GLL QTLI+H+IRT ++PF
Sbjct: 773 MVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRLPF 832
Query: 722 IQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVK 781
IQ A+WP+++ TL++ +G+++PF+ + + LPL+YF +L+ + +GY T+ QLVK
Sbjct: 833 IQSRAAWPLMAMTLLVMVVGVSLPFSPLASYLQLQALPLSYFPWLIAILVGYMTLTQLVK 892
Query: 782 RIY 784
Y
Sbjct: 893 GFY 895
|
Mediates magnesium influx to the cytosol. Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 2 |
| >sp|D0ZTB2|ATMA_SALT1 Magnesium-transporting ATPase, P-type 1 OS=Salmonella typhimurium (strain 14028s / SGSC 2262) GN=mgtA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 624 bits (1609), Expect = e-178, Method: Compositional matrix adjust.
Identities = 329/783 (42%), Positives = 486/783 (62%), Gaps = 20/783 (2%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSE-LIVQVDQRDVVPGDI 62
+V IS L F QE S+KAA L V V R ++ L + +DQ +VPGDI
Sbjct: 131 MVGISTLLNFVQEARSTKAADALKAMVSNTATVLRVINENGENAWLELPIDQ--LVPGDI 188
Query: 63 VIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGT 122
+ GD+ P D+R++ ++ L V+Q+SLTGES EK A RE L+ +CFMGT
Sbjct: 189 IKLAAGDMIPADLRIIQARDLFVAQASLTGESLPVEKVAATREPRQNNPLECDTLCFMGT 248
Query: 123 NVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDD-FEKGVRRISFVLICVMLIVATIII 181
NVVSG+ +V++TG+ T+ + + +Q + F+KG+ R+S +LI ML++A +++
Sbjct: 249 NVVSGTAQAVVMATGAGTWFGQLAGRVSEQDNEQNAFQKGISRVSMLLIRFMLVMAPVVL 308
Query: 182 LIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241
+I+ +T + E+ LF +SVA LTP+M P+IV ++LA+GA+ +++ + +VK L AI++
Sbjct: 309 IINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNF 368
Query: 242 GTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAY 301
G MDILC DKTGTLT D+ ++ NH D G P E+VL A+LNS+Y+T K LD A+L
Sbjct: 369 GAMDILCTDKTGTLTQDKIVLENHTDISGKPSEHVLHCAWLNSHYQTGLKNLLDTAVLEG 428
Query: 302 VYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVI 361
V R + +W+K+DEIPFDF RR++SV++ +S ++ KGAL+E++
Sbjct: 429 VDETAARQLSGRWQKIDEIPFDFERRRMSVVVAEDSNVHQ---------LVCKGALQEIL 479
Query: 362 KVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDG 421
VC+ V H +G I +R+ + + L+ +GLRV+ VA K LP + R D
Sbjct: 480 NVCTQVRH--NGDIVPLDDNMLRRVKRVTDTLNRQGLRVVAVATK-YLPAREGDYQRID- 535
Query: 422 PIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH 481
ESD++ G I F DPPK++ AL L G+ K+LTGDS +A K+CHEVG+
Sbjct: 536 --ESDLILEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGD 593
Query: 482 VSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLA 541
V G D+E LS ++ R T+ ARLTP K R+V L+ G HVVGF+GDGIND+ A
Sbjct: 594 VIIGSDIEGLSDDALAALAARTTLFARLTPMHKERIVTLLKREG-HVVGFMGDGINDAPA 652
Query: 542 LDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLG 601
L AA++GISVD +A++ ADIILLEK L VL GV GR TF N +KYIKM+ +N G
Sbjct: 653 LRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFSNMLKYIKMTASSNFG 712
Query: 602 GVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGLPMF 661
V S+L+A+ FL P+ P LL QN LY V Q+AIP+D ++ + ++ PQ W+ L F
Sbjct: 713 NVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDEEQIQKPQRWNPADLGRF 772
Query: 662 ILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIPF 721
++F GP+ + D+ +W+ + A F+S WFV GLL QTLI+H+IRT ++PF
Sbjct: 773 MVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRLPF 832
Query: 722 IQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVK 781
IQ A+WP+++ TL++ +G+++PF+ + + LPL+YF +L+ + +GY T+ QLVK
Sbjct: 833 IQSRAAWPLMAMTLLVMVVGVSLPFSPLASYLQLQALPLSYFPWLIAILVGYMTLTQLVK 892
Query: 782 RIY 784
Y
Sbjct: 893 GFY 895
|
Mediates magnesium influx to the cytosol. Salmonella typhimurium (strain 14028s / SGSC 2262) (taxid: 588858) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 2 |
| >sp|P22036|ATMB_SALTY Magnesium-transporting ATPase, P-type 1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=mgtB PE=1 SV=3 | Back alignment and function description |
|---|
Score = 619 bits (1595), Expect = e-176, Method: Compositional matrix adjust.
Identities = 334/804 (41%), Positives = 500/804 (62%), Gaps = 30/804 (3%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKV-QRCAGRV--VQSELIVQVDQRDV 57
+L +V +S LRF+QE+ +++AA L + VR V +R G + VQ E+ ++ ++
Sbjct: 121 ILTMVSLSGLLRFWQEFRTNRAAQALKKMVRTTATVLRRGPGNIGAVQEEIPIE----EL 176
Query: 58 VPGDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEK---TADIR-------EDH 107
VPGD+V GDL P DVRLL S+ L +SQS L+GES EK AD+ D
Sbjct: 177 VPGDVVFLAAGDLVPADVRLLASRDLFISQSILSGESLPVEKYDVMADVAGKDSEQLPDK 236
Query: 108 CTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISF 167
LLDL NIC MGTNV SG +VV+TGS+T+ ++ +I + F++GV +S+
Sbjct: 237 DKSLLDLGNICLMGTNVTSGRAQAVVVATGSRTWFGSLAKSIVGTRTQTAFDRGVNSVSW 296
Query: 168 VLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMAR 227
+LI MLI+ +++LI+ F+ + E+ LF ++VA LTP+M P+IV+++LAKGA+AM+R
Sbjct: 297 LLIRFMLIMVPVVLLINGFSKGDWVEASLFALAVAVGLTPEMLPMIVSSNLAKGAIAMSR 356
Query: 228 DRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYK 287
+ +VK L AI++ G MD+LC DKTGTLT D + +HLD G VL A+LNS +
Sbjct: 357 RKVIVKRLNAIQNFGAMDVLCTDKTGTLTQDNIFLEHHLDVSGVKSSRVLMLAWLNSSSQ 416
Query: 288 TDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFS 347
+ + +D AIL + +++ K DE+PFDFVRR+VSV++E +Q
Sbjct: 417 SGARNVMDRAILRFGEGRIAPSTKARFIKRDELPFDFVRRRVSVLVE--------DAQHG 468
Query: 348 GRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKR 407
R +I KGA+EE++ V + + D + + T ++ +L E+ + +G RV+ +A ++
Sbjct: 469 DRCLICKGAVEEMMMVATHLREGDR--VVALTETRRELLLAKTEDYNAQGFRVLLIATRK 526
Query: 408 LLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSL 467
L S + E+++ G++TF DPPK+SA +A+ L GV K+LTGD+ +
Sbjct: 527 L--DGSGNNPTLSVEDETELTIEGMLTFLDPPKESAGKAIAALRDNGVAVKVLTGDNPVV 584
Query: 468 AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKH 527
+IC EVGI T + TG +E +S V++ V ARLTP QK R++Q+LQ G H
Sbjct: 585 TARICLEVGIDTHDILTGTQVEAMSDAELASEVEKRAVFARLTPLQKTRILQALQKNG-H 643
Query: 528 VVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGN 587
VGFLGDGIND+ AL A+VGISVDS A +AK+ +DIILLEKDL VL GV +GR TFGN
Sbjct: 644 TVGFLGDGINDAPALRDADVGISVDSAADIAKESSDIILLEKDLMVLEEGVIKGRETFGN 703
Query: 588 TMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYV 647
+KY+ M+ +N G V S+L+A+ F+ P+ LL QN +Y + Q+++PWDKM+ +++
Sbjct: 704 IIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLIQNLMYDISQLSLPWDKMDKEFL 763
Query: 648 KTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQ 707
+ P+ W + F+L+ GP + D+T +W+ + A N F+S WF+EGLL Q
Sbjct: 764 RKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWYVFAANNVEAQALFQSGWFIEGLLSQ 823
Query: 708 TLIIHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLL 767
TL++H++RT+KIPFIQ A+ PVL +T +I AIGI IPF+ +G ++G LPL+YF +L+
Sbjct: 824 TLVVHMLRTQKIPFIQSRATLPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPLSYFPWLV 883
Query: 768 LLFIGYFTVGQLVKRIYILIYKKW 791
+ Y V Q +KR YI + +W
Sbjct: 884 ATLLSYCLVAQGMKRFYIKRFGQW 907
|
Mediates magnesium influx to the cytosol. Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 2 |
| >sp|O59868|ATC1_SCHPO Calcium-transporting ATPase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmr1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 196/671 (29%), Positives = 332/671 (49%), Gaps = 79/671 (11%)
Query: 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGD 61
LA+V++ V + F QEY S ++ L+ V V R ++E IV +VPGD
Sbjct: 89 LAIVIV-VTVGFVQEYRSEQSLKALNNLVPHYCNVIRSG----KTEHIVA---SKLVPGD 140
Query: 62 IVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMG 121
+VI + GD P D+R++ + L + +S+LTGE+ +K+++ + + L + NI FMG
Sbjct: 141 LVILQIGDRVPADLRIVEATELEIDESNLTGENSPRKKSSEAISSNIS-LTERNNIAFMG 199
Query: 122 TNVVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDFEKGVRRISFVLICVMLIVATII 180
T V G G G+VV+TGS T +F T+ + +KP + + + L + LI +I
Sbjct: 200 TLVRHGHGRGIVVATGSDTEFGRVFLTMQQTEKPKTPLQNSMDDLGKQLSLISLIGIAVI 259
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
+L+ +F KN E + G+S+A A P+ P+IV +LA G L M++ R +++ L ++
Sbjct: 260 VLVGFFQGKNWLEMLTIGVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIIRRLPSVET 319
Query: 241 MGTMDILCIDKTGTLTMDRAIMVN-----HLDSWGFPK--------------ENVLRFAF 281
+G+++++C DKTGTLTM+ + L ++ P+ E L A
Sbjct: 320 LGSVNVICSDKTGTLTMNHMTVTKIYTCGMLAAFSLPESEHIELSVRRTVGIEKALLAAA 379
Query: 282 LNSYYKTDQK-------------YPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRK 328
L + K K +P+D A++ G + + ++ E+ F R+
Sbjct: 380 LCNNSKVHNKADSILDTTCPWAGFPVDVALIECSERFGLKDPRETYSRISEVSFSSERKY 439
Query: 329 VSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILN 388
+SV ++ S + KGA E+V+ C++ D G T+E ++ I
Sbjct: 440 MSVAVQYNS----------SKMNFMKGATEQVLSSCAYFSDQD-GVQHELTAEMKENIQR 488
Query: 389 LGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALW 448
E++ GLR+I VA G + +VF GL DPP+ ++++
Sbjct: 489 NEFEMAASGLRIIAVA---------------SGINTNKLVFHGLFGINDPPRPQVRESVQ 533
Query: 449 RLAKKGVKAKLLTGDSLSLAIKICHEVGIR---------TTHVSTGPDLELLSQESFHER 499
L GV+ ++TGDS+ AI I +G+ + TG L+ L S +
Sbjct: 534 YLMTGGVRVIMITGDSVVTAISIARSLGMAIPSNDEEAIRNYALTGAQLDDLDSSSLRDA 593
Query: 500 VKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVA 558
V R V AR TP K+++V++LQS+G VV GDG+ND+ AL A++GI++ G VA
Sbjct: 594 VSRVVVFARTTPQHKMKIVEALQSLGD-VVAMTGDGVNDAPALKLADIGIAMGRQGTDVA 652
Query: 559 KDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPL 618
K+ AD+IL + +++ VE G+ F N +I + ++ + + I+++F +PL
Sbjct: 653 KEAADMILTDDSFATILSAVEEGKGIFNNIKNFITFQLSTSVAALSLIAISSVFGFQNPL 712
Query: 619 TPKQLLTQNFL 629
Q+L N L
Sbjct: 713 NAMQILWINIL 723
|
Transports calcium and manganese ions into the cell. Regulates cell morphogenesis through control of manganese and calcium homeostasis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O43108|ATC1_YARLI Calcium-transporting ATPase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PMR1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 225/810 (27%), Positives = 367/810 (45%), Gaps = 114/810 (14%)
Query: 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVI 64
+LI + F QEY S K+ L++ V + R S+ ++ +VPGD+V
Sbjct: 113 ILIVTTVGFVQEYRSEKSLEALNKLVPPEAHLIRAG----NSQTVLA---STLVPGDLVE 165
Query: 65 FEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTP---LLDLKNICFMG 121
F GD P D R++ + HL + +S+LTGE T T D TP L D N +MG
Sbjct: 166 FSVGDRIPADCRIVKAVHLSIDESNLTGE--TTPVTKDTNPVTGTPPIGLADRTNTAYMG 223
Query: 122 TNVVSGSGTGLVVSTGSKTYTST---MFSTIGKQKPP-----DDFEKGVRRISFVLICVM 173
T V G+GTG+VV TGS T M S I K P D+ K + +SF +I V
Sbjct: 224 TLVRDGNGTGIVVGTGSHTAFGAVYDMVSEISTPKTPLQASMDNLGKDLSLVSFGVIGV- 282
Query: 174 LIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVK 233
I LI F ++ E G+S+A A P+ P+IV +LA G L M+R + +V+
Sbjct: 283 ------ICLIGMFQGRDWLEMFTIGVSLAVAAIPEGLPIIVTVTLALGVLRMSRQKAIVR 336
Query: 234 SLGAIRDMGTMDILCIDKTGTLT-----------MDRAIMVNHL-------DSWGFPKE- 274
L ++ +G+++++C DKTGTLT +D + N + + PK
Sbjct: 337 KLPSVETLGSVNVICSDKTGTLTRNHMSCTTCWTVDMGDLANAVTLKPGQSHTEADPKAV 396
Query: 275 ----------NVLRFAFL--NSYYKTDQKY----PLDDAILAYVYTNGYRFQASKWKKLD 318
N+L+ L NS + + + D A++ + G K++
Sbjct: 397 AALKNSVSLANMLKVGNLCNNSKFNREAGHLVGNATDIALIEVLDYFGLEDTRETRKRVA 456
Query: 319 EIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSF 378
E+PF R+ + +T + S + KGA E + C + D G F
Sbjct: 457 EVPFSSSRKWM--------LTSTTTGDSSTPMISVKGAGEVIAPFCEYYCKKD-GKTAPF 507
Query: 379 TSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDP 438
+ +K++ + E+SN+GLR+I A K Q + + P +VF GL+ YDP
Sbjct: 508 NDDMRKKVTEIASEMSNDGLRIIAFAYK----QGKYEEGSEEAP--EGLVFAGLMGLYDP 561
Query: 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR----TTHVSTGPDLELLSQE 494
P+ +A+ RL GV+ ++TGDS + A+ I +G+ T V G L +S +
Sbjct: 562 PRPDVPRAIRRLTTGGVRVVMITGDSAATALSIGRRIGMPLMPGTQSVVEGSKLATMSDQ 621
Query: 495 SFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSG 554
+ E ++ A++ AR +P K+++V+ Q G VV GDG+ND+ AL A++GI++ G
Sbjct: 622 ALDECLQTASIFARTSPEDKMKIVKGFQRRG-DVVAMTGDGVNDAPALKLADIGIAMGQG 680
Query: 555 AS-VAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFL 613
+ VAK+ AD+IL + D +++ +E G+ F N +I + ++ + + +AT+
Sbjct: 681 GTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIRNFITFQLSTSMAALSIVAVATIMG 740
Query: 614 QTDPLTPKQLLTQNFLY------SVGQIAIPWDKME------GDYVKTPQIWSENGLPMF 661
+PL P Q+L N L S+G + D M + V TP + +
Sbjct: 741 LENPLNPMQILWINILMDGPPAQSLGVEPVDPDVMNKPPRPRNEKVMTPDLVKKCVEAAV 800
Query: 662 ILFNGPVCILC-----------DVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTL- 709
I+ G + + D T F + +Y+ +N + + F G +
Sbjct: 801 IILVGTMLVYVTQMQDGVIDKRDTTMTFTCFVFYDMFNALACRSATKSVFEIGFFSNKMF 860
Query: 710 -------IIHLIRTEKIPFIQEVASWPVLS 732
II + +PF+Q V LS
Sbjct: 861 LYACGASIIGQLAVVYVPFLQSVFQTEALS 890
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Has a role in the secretory pathway. Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P37278|ATCL_SYNE7 Probable calcium-transporting ATPase OS=Synechococcus elongatus (strain PCC 7942) GN=pacL PE=3 SV=2 | Back alignment and function description |
|---|
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 192/682 (28%), Positives = 341/682 (50%), Gaps = 80/682 (11%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRD---- 56
+L +V+++ L + QE + KA L ++V+R D RD
Sbjct: 104 ILVIVVLNAVLGYLQESRAEKALAALKGMAAPLVRVRR--------------DNRDQEIP 149
Query: 57 ---VVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLD 113
+VPGD+++ E GD P D RL+ S +L V +S+LTGE+ +K AD + + D
Sbjct: 150 VAGLVPGDLILLEAGDQVPADARLVESANLQVKESALTGEAEAVQKLADQQLPTDVVIGD 209
Query: 114 LKNICFMGTNVVSGSGTGLVVSTGSKT---YTSTMFSTIGKQKPPDDFEKGVRRISFVLI 170
N F GT V+ G G LV +TG T +T+ ++ +K P ++ + ++ VL+
Sbjct: 210 RTNCLFQGTEVLQGRGQALVYATGMNTELGRIATLLQSVESEKTP--LQQRLDKLGNVLV 267
Query: 171 CVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRC 230
LI+ I++ + ++ + + G+S+A A+ P+ P ++ +LA G M +
Sbjct: 268 SGALILVAIVVGLGVLNGQSWEDLLSVGLSMAVAIVPEGLPAVITVALAIGTQRMVQRES 327
Query: 231 VVKSLGAIRDMGTMDILCIDKTGTLTMDRAIM--VNHLD------SWGF-PKENVL---R 278
+++ L A+ +G++ +C DKTGTLT ++ ++ ++ LD G+ P + L
Sbjct: 328 LIRRLPAVETLGSVTTICSDKTGTLTQNKMVVQQIHTLDHDFTVTGEGYVPAGHFLIGGE 387
Query: 279 FAFLNSY------------------YKTDQKY-----PLDDAILAYVYTNGYRFQASK-- 313
N Y + + + P + ++L G + +
Sbjct: 388 IIVPNDYRDLMLLLAAGAVCNDAALVASGEHWSIVGDPTEGSLLTVAAKAGIDPEGLQRV 447
Query: 314 WKKLDEIPFDFVRRKVSVILET--ESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMD 371
+ DEIPF R+++SV++ E+ R Q FV KG+ E +++ C
Sbjct: 448 LPRQDEIPFTSERKRMSVVVADLGETTLTIREGQPYVLFV--KGSAELILERCQHC--FG 503
Query: 372 SGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLG 431
+ + S T+ +++IL GE +++ G+RV+G A + P A + + E+D+ +LG
Sbjct: 504 NAQLESLTAATRQQILAAGEAMASAGMRVLGFAYR---PSAIADVDED---AETDLTWLG 557
Query: 432 LITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI-RTTH-VSTGPDLE 489
L+ D P+ ++A+ R + G++ ++TGD A I ++GI H V TG L
Sbjct: 558 LMGQIDAPRPEVREAVQRCRQAGIRTLMITGDHPLTAQAIARDLGITEVGHPVLTGQQLS 617
Query: 490 LLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549
++ V+ V AR+ P KLR+V+SLQ G+ V GDG+ND+ AL AN+G+
Sbjct: 618 AMNGAELDAAVRSVEVYARVAPEHKLRIVESLQRQGEFV-AMTGDGVNDAPALKQANIGV 676
Query: 550 SVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLI 608
++ +G V+K+ +D++LL+ + +VA VE GR+ +GN K+IK + +N+G +L++
Sbjct: 677 AMGITGTDVSKEASDMVLLDDNFATIVAAVEEGRIVYGNIRKFIKYILGSNIGELLTIAS 736
Query: 609 ATMF-LQTDPLTPKQLLTQNFL 629
A + L PLTP Q+L N +
Sbjct: 737 APLLGLGAVPLTPLQILWMNLV 758
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Synechococcus elongatus (strain PCC 7942) (taxid: 1140) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q58623|Y1226_METJA Putative cation-transporting ATPase MJ1226 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1226 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 205/755 (27%), Positives = 368/755 (48%), Gaps = 82/755 (10%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
+L L+L++ + F++EY A + EF++ + + RV++ + +++VPG
Sbjct: 82 ILILLLVNGVVGFWEEY----KAENVIEFLKQKMALN---ARVLRDGKWQIIPAKELVPG 134
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
D+V GD+ P D+ L+ +LVV +S+LTGES EK + +I +
Sbjct: 135 DVVRIRIGDIVPADIILVDGDYLVVDESALTGESLPVEKK-------------IGDIAYS 181
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
G+ V G TG+V +TG TY + K + ++K + +I LI + +I+ I+
Sbjct: 182 GSIVKKGEMTGIVKATGLNTYFGKTVKLVEKAEKVSSYQKMIIKIGDYLIVLAVILIAIM 241
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
+ ++ F K+L E+ F + +A + P P +++ ++A GAL +A+ +VK L AI +
Sbjct: 242 VAVELFRGKSLIETAQFALVLAVSAIPAAMPAVLSITMAIGALNLAKKDAIVKKLVAIEE 301
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
+ +DILC DKTGTLT ++ + + GF KE+V+ FA L S + + +D AIL
Sbjct: 302 LAGVDILCSDKTGTLTKNQLVCGEIIALNGFSKEDVVLFAALAS--REEDADAIDMAILN 359
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETES-ITEDRSSQFSGRFVITKGALEE 359
G + +K IPFD VI TE+ +T D F ++KGA +
Sbjct: 360 EAKKLGLMEKIKNYKIKKFIPFD------PVIKRTEAEVTNDEE------FKVSKGAPQV 407
Query: 360 VIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRN 419
++ +C+ E + ++++ + ++L+ G R +GVAV K+ + +
Sbjct: 408 ILDLCNADEEL------------RRKVEEIVDKLAENGYRALGVAV-----YKNGRWH-- 448
Query: 420 DGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479
F G+I YDPP++ A A+ ++ + GV K++TGD +++A I +GI
Sbjct: 449 ---------FAGIIPLYDPPREDAPLAVKKIKELGVIIKMVTGDHVAIAKNIARMLGIGD 499
Query: 480 THVSTGPDLELL-----SQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGD 534
+S L+ L +E F E V+ A A + P K ++V SLQ G H+V GD
Sbjct: 500 KIISISELLKKLKRGEIKEEKFDEIVEEADGFAEVFPEHKYKIVDSLQKRG-HLVAMTGD 558
Query: 535 GINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKM 594
G+ND+ AL A+ GI+V + A+ ADI+LL ++V+V ++ R F Y+
Sbjct: 559 GVNDAPALKKADCGIAVSNATDAARAAADIVLLSPGISVIVDAIQEARRIFQRMESYVIY 618
Query: 595 SIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWS 654
I + + + + + L P+T ++ L + +AI +D + K+P W
Sbjct: 619 RITETIRILFFVELCILILGIYPITALMIVLLAILNDIPILAIAYDNVVEP--KSPVRWR 676
Query: 655 ENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLI 714
+ M G L V + F +++ + + + + +S F++ +L I +
Sbjct: 677 MREILMLSTALG----LSGVVSSFLIFYISDVFLHLTIAELQSFVFLKLILAGHATIFVT 732
Query: 715 RTE----KIPFIQEVASWPVLSSTL---VISAIGI 742
R K P+ ++ W V+ + + +++A GI
Sbjct: 733 RIRDRLWKKPYPSKLLFWGVMGTNIIGTIVAAEGI 767
|
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|P63687|CTPF_MYCTU Probable cation-transporting ATPase F OS=Mycobacterium tuberculosis GN=ctpF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 242 bits (618), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 191/679 (28%), Positives = 310/679 (45%), Gaps = 74/679 (10%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAG-RVVQSELIVQVDQRDVVP 59
+ +V+I+ + F QE + A L V KV R + SE ++VP
Sbjct: 91 IFGVVVINAIVGFIQESKAEAALQGLRSMVHTHAKVVREGHEHTMPSE--------ELVP 142
Query: 60 GDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICF 119
GD+V+ GD P D+RL+ L V++S+LTGES K ++ TP+ D +NI +
Sbjct: 143 GDLVLLAAGDKVPADLRLVRQTGLSVNESALTGESTPVHKD-EVALPEGTPVADRRNIAY 201
Query: 120 MGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKP-PDDFEKGVRRISFVLICVMLIVAT 178
GT V +G G G+VV+TG++T + +G + + S L +L +A
Sbjct: 202 SGTLVTAGHGAGIVVATGAETELGEIHRLVGAAEVVATPLTAKLAWFSKFLTIAILGLAA 261
Query: 179 IIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238
+ + ++ E+ I++A P+ P V +LA G MA+ R V++ L A+
Sbjct: 262 LTFGVGLLRRQDAVETFTAAIALAVGAIPEGLPTAVTITLAIGMARMAKRRAVIRRLPAV 321
Query: 239 RDMGTMDILCIDKTGTLTMDR----AIMVNH------------------LDSWGFP--KE 274
+G+ ++C DKTGTLT ++ +I H D P
Sbjct: 322 ETLGSTTVICADKTGTLTENQMTVQSIWTPHGEIRATGTGYAPDVLLCDTDDAPVPVNAN 381
Query: 275 NVLRFAFLNSYYKTDQKY------------PLDDAILAYVYTNGYRFQ--ASKWKKLDEI 320
LR++ L D P + A+L G+ + A+ ++ I
Sbjct: 382 AALRWSLLAGACSNDAALVRDGTRWQIVGDPTEGAMLVVAAKAGFNPERLATTLPQVAAI 441
Query: 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTS 380
PF R+ ++ + + V+ KGA+E ++ +C + G +
Sbjct: 442 PFSSERQYMATL----------HRDGTDHVVLAKGAVERMLDLCG----TEMGADGALRP 487
Query: 381 EEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPK 440
++ +L E L++ GLRV+ + + ++ I + GL DPP+
Sbjct: 488 LDRATVLRATEMLTSRGLRVLATGMGA---GAGTPDDFDENVIPGSLALTGLQAMSDPPR 544
Query: 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI------RTTHVSTGPDLELLSQE 494
+A A+ G+ K++TGD A I EVG+ V TG +L LS +
Sbjct: 545 AAAASAVAACHSAGIAVKMITGDHAGTATAIATEVGLLDNTEPAAGSVLTGAELAALSAD 604
Query: 495 SFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSG 554
+ E V A+V AR++P QKLR+VQ+LQ+ G HVV GDG+ND+ AL AN+G+++ G
Sbjct: 605 QYPEAVDTASVFARVSPEQKLRLVQALQARG-HVVAMTGDGVNDAPALRQANIGVAMGRG 663
Query: 555 AS-VAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFL 613
+ VAKD AD++L + D + A VE GR F N K+I ++ NLG L +L A
Sbjct: 664 GTEVAKDAADMVLTDDDFATIEAAVEEGRGVFDNLTKFITWTLPTNLGEGLVILAAIAVG 723
Query: 614 QTDPLTPKQLLTQNFLYSV 632
P+ P Q+L N ++
Sbjct: 724 VALPILPTQILWINMTTAI 742
|
Mycobacterium tuberculosis (taxid: 1773) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 792 | ||||||
| 224081875 | 971 | endoplasmic reticulum [ER]-type calcium | 1.0 | 0.815 | 0.757 | 0.0 | |
| 255585770 | 863 | mg(2+)-transporting atpase bacteria, put | 0.816 | 0.749 | 0.775 | 0.0 | |
| 297745714 | 749 | unnamed protein product [Vitis vinifera] | 0.756 | 0.799 | 0.823 | 0.0 | |
| 359496900 | 764 | PREDICTED: magnesium-transporting ATPase | 0.753 | 0.781 | 0.822 | 0.0 | |
| 147854426 | 1258 | hypothetical protein VITISV_016764 [Viti | 0.515 | 0.324 | 0.821 | 0.0 | |
| 387819145 | 881 | magnesium-translocating P-type ATPase [C | 0.963 | 0.866 | 0.440 | 0.0 | |
| 170757726 | 881 | magnesium-translocating P-type ATPase [C | 0.963 | 0.866 | 0.440 | 0.0 | |
| 153940214 | 881 | magnesium-translocating P-type ATPase [C | 0.963 | 0.866 | 0.440 | 0.0 | |
| 226950303 | 881 | magnesium-importing ATPase [Clostridium | 0.963 | 0.866 | 0.440 | 0.0 | |
| 168179304 | 881 | magnesium-translocating P-type ATPase [C | 0.963 | 0.866 | 0.442 | 0.0 |
| >gi|224081875|ref|XP_002306511.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] gi|222855960|gb|EEE93507.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/817 (75%), Positives = 708/817 (86%), Gaps = 25/817 (3%)
Query: 1 MLALVLISVCLRFYQ------------------------EYGSSKAAMKLSEFVRCPIKV 36
ML LV ISV LRFYQ EY SSKAAMKLSEFVRCP+KV
Sbjct: 155 MLILVFISVSLRFYQSLNDQAVTSSNLIIPIYVIKIKHKEYTSSKAAMKLSEFVRCPVKV 214
Query: 37 QRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWT 96
QRCAGRV+Q+ELIVQVDQRD+VPGDIVIFEPGDLFPGDVRLL+SKHL VSQSSLTGESW
Sbjct: 215 QRCAGRVIQTELIVQVDQRDIVPGDIVIFEPGDLFPGDVRLLSSKHLSVSQSSLTGESWI 274
Query: 97 AEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPD 156
EKTAD +E+ TPLL+LKNICFMGTNVVSGSG GLVVSTG KTY STMFS+IGK+KPPD
Sbjct: 275 TEKTADAKENQRTPLLELKNICFMGTNVVSGSGMGLVVSTGCKTYMSTMFSSIGKKKPPD 334
Query: 157 DFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNT 216
F G+R IS+VLI VML+V IIIL DY S+++SES+LFG+SVACALTP M PLIVNT
Sbjct: 335 GFNDGIRCISYVLISVMLVVMAIIILTDYLKSRDVSESVLFGLSVACALTPNMLPLIVNT 394
Query: 217 SLAKGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENV 276
SLAKGAL MARDRC+VKSL IRDMG+MDILCIDKTGTLTMD AI+VNHLDSWG P+E V
Sbjct: 395 SLAKGALVMARDRCIVKSLAVIRDMGSMDILCIDKTGTLTMDHAIIVNHLDSWGSPQEKV 454
Query: 277 LRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETE 336
LRFAFLNSY+KTDQKYPLDDAILAYV+TNGYRFQ SKW K+DEIPFDF+RR+VSVILETE
Sbjct: 455 LRFAFLNSYFKTDQKYPLDDAILAYVFTNGYRFQPSKWSKIDEIPFDFIRRRVSVILETE 514
Query: 337 S-ITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSN 395
S ++ R+S RF+ITKGALEEV++VCSF++++D I +F+SE+ +RILN+GEELSN
Sbjct: 515 SNASQGRNSHTCDRFMITKGALEEVMRVCSFIDNVDGSEIVTFSSEDYQRILNMGEELSN 574
Query: 396 EGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGV 455
GLR+IGVA+KRL Q S + N+ ESDMVFLG+ITF+DPPKDSAKQALWRLA+KGV
Sbjct: 575 RGLRIIGVAIKRLQMQGSHPNMANEEITESDMVFLGVITFFDPPKDSAKQALWRLAEKGV 634
Query: 456 KAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515
KAK+LTGDSLSLA++IC E+GIRTT+V+TGP+LELL+Q+ FHE VK ATVLARLTPTQKL
Sbjct: 635 KAKVLTGDSLSLAVRICEELGIRTTNVTTGPELELLNQDDFHETVKSATVLARLTPTQKL 694
Query: 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLV 575
RVVQSLQ+ G+HVVGFLGDG+NDSLA+DAANVGISVDSGASVAKDLADIILLEKDLNVLV
Sbjct: 695 RVVQSLQTAGEHVVGFLGDGVNDSLAIDAANVGISVDSGASVAKDLADIILLEKDLNVLV 754
Query: 576 AGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQI 635
AGVE GR+T+GNTMKYIKMS++AN+G VLSLLIAT+ L+ +PLTP+QLLTQ FLYSVGQI
Sbjct: 755 AGVENGRLTYGNTMKYIKMSVVANIGSVLSLLIATLLLEFEPLTPRQLLTQTFLYSVGQI 814
Query: 636 AIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFF 695
AIPWDKME DYVKTPQ WSE LP+FIL+NGPVC LCD+ L FLWFYY YN +V FF
Sbjct: 815 AIPWDKMEEDYVKTPQKWSEKSLPIFILWNGPVCTLCDLANLIFLWFYYRDYNIFDVKFF 874
Query: 696 RSAWFVEGLLMQTLIIHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGF 755
SAWF+EGLLMQTLI HLIRTEKIPFIQE++SWPV+ ST+VISAIGIAIPFT +G+VMGF
Sbjct: 875 HSAWFIEGLLMQTLIFHLIRTEKIPFIQEISSWPVICSTVVISAIGIAIPFTQVGEVMGF 934
Query: 756 TELPLTYFGFLLLLFIGYFTVGQLVKRIYILIYKKWL 792
T LP +YFGFL++LF+GYFTVGQ+VKR+YILIY+KWL
Sbjct: 935 TNLPFSYFGFLVVLFLGYFTVGQVVKRMYILIYRKWL 971
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|255585770|ref|XP_002533565.1| mg(2+)-transporting atpase bacteria, putative [Ricinus communis] gi|223526565|gb|EEF28822.1| mg(2+)-transporting atpase bacteria, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1051 bits (2717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/647 (77%), Positives = 579/647 (89%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
+L LV ISV LRFYQE SSKAAMKL EFV+CP+KVQRCAGRVVQ+EL+VQVDQRD+VPG
Sbjct: 188 LLILVFISVSLRFYQENSSSKAAMKLYEFVKCPVKVQRCAGRVVQTELVVQVDQRDIVPG 247
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
DIVIFEPGDLFPGDVRLL+SK LVVSQSSLTGESWT EKTA+ +E+ TPLL+LKNICFM
Sbjct: 248 DIVIFEPGDLFPGDVRLLSSKQLVVSQSSLTGESWTTEKTANTKENASTPLLELKNICFM 307
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
GTNVVSGSGTGLVVSTGSKTY STMFSTIGKQKPPD FE G+RR S+VLI VMLIV TII
Sbjct: 308 GTNVVSGSGTGLVVSTGSKTYMSTMFSTIGKQKPPDGFENGIRRTSYVLIGVMLIVMTII 367
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
I+ Y S++LSESILFG+SVACALTP M PLIVNTSLAKGA+AMA+DRC+VKSL AIRD
Sbjct: 368 IVTSYNKSRDLSESILFGLSVACALTPNMLPLIVNTSLAKGAVAMAKDRCIVKSLAAIRD 427
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
MG+MDILC+DKTGTLTM+RAI+VNHLDSWG PKE VLRFAFLNSY+KTDQKYPLDDAILA
Sbjct: 428 MGSMDILCMDKTGTLTMNRAIVVNHLDSWGSPKEKVLRFAFLNSYFKTDQKYPLDDAILA 487
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
+ YTNGYRFQ SK++K+DEIPFDF RR+VSVILETES + R+SQ R+++TKGALEE+
Sbjct: 488 FAYTNGYRFQPSKYRKIDEIPFDFTRRRVSVILETESDAKGRNSQVLDRYMVTKGALEEI 547
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
+KVCSF++H+D G +T+F+SE+ +RILN+GE+LS++GLR+IGVA+KRL Q+S D
Sbjct: 548 MKVCSFIDHVDRGTMTTFSSEDYRRILNMGEDLSDQGLRIIGVAIKRLGMQRSDPCTAED 607
Query: 421 GPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480
E+DMVFLG++ F+DPPKDSAKQALWRLA+KGVKAK+LTGDSLSLA++IC E+GIRT
Sbjct: 608 EATETDMVFLGVVAFFDPPKDSAKQALWRLAEKGVKAKVLTGDSLSLAVRICEELGIRTA 667
Query: 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSL 540
+V+TGP+LE L+Q+ FHE VKRATVLARLTPTQKLRVVQSLQ+V HVVGFLGDGINDSL
Sbjct: 668 YVTTGPELEELNQDDFHETVKRATVLARLTPTQKLRVVQSLQTVDDHVVGFLGDGINDSL 727
Query: 541 ALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANL 600
A+DAANVGISVDSGASVAKD ADIILLEKDLNVLV GVE GR+TFGNTMKYIKMS++AN+
Sbjct: 728 AIDAANVGISVDSGASVAKDFADIILLEKDLNVLVDGVEHGRLTFGNTMKYIKMSVVANV 787
Query: 601 GGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYV 647
G VLS+LIAT L +PLTP+QLL Q F+YSVGQIAIPWDK+E DYV
Sbjct: 788 GSVLSILIATQLLDFEPLTPRQLLAQTFIYSVGQIAIPWDKLEEDYV 834
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745714|emb|CBI41039.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/599 (82%), Positives = 538/599 (89%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
ML LV ISV LRFYQEYGSSKAAMKLSE VRCP+KVQRCAGRVVQ+ELIVQVDQRD+VPG
Sbjct: 151 MLVLVFISVSLRFYQEYGSSKAAMKLSELVRCPVKVQRCAGRVVQTELIVQVDQRDIVPG 210
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
DI+IFEPGDLFPGDVRLLTSKHLVVSQSSLTGES EKTADI+ED TPLLDLKNICFM
Sbjct: 211 DIIIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESGVTEKTADIKEDQSTPLLDLKNICFM 270
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
GT+VVSG GTGL+VSTGSKTY STMFS IGKQKPPD FEKGVRRIS+VLI VML+V T I
Sbjct: 271 GTSVVSGCGTGLIVSTGSKTYMSTMFSNIGKQKPPDYFEKGVRRISYVLIAVMLVVVTAI 330
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
+L YFTS +LS+SILFGISVACALTPQM PLIVNTSLAKGALAMARDRC+VKSL AIRD
Sbjct: 331 VLTCYFTSYDLSQSILFGISVACALTPQMLPLIVNTSLAKGALAMARDRCIVKSLTAIRD 390
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
MG+MDILCIDKTGTLTM+RAIMVNHLDSWG PKE VLRFAFLN+Y+KT+QKYPLDDAILA
Sbjct: 391 MGSMDILCIDKTGTLTMNRAIMVNHLDSWGLPKEKVLRFAFLNAYFKTEQKYPLDDAILA 450
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
YVYTNGYRFQ SKWKK+DEIPFDF RR+VSVILETE ++ S Q RFV+TKGALEE+
Sbjct: 451 YVYTNGYRFQPSKWKKIDEIPFDFTRRRVSVILETELNPKEDSYQSLERFVVTKGALEEI 510
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
I +C F++H+D IT+F+ E+Q+RILN+GEELS EGLRVIGVAVKRL + S S +D
Sbjct: 511 INLCCFIDHIDQDAITTFSLEDQQRILNMGEELSYEGLRVIGVAVKRLQRKTSEGSIDSD 570
Query: 421 GPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480
ES+M+FLGLITF+DPPKDSAKQALWRLA+KGVKAK+LTGDSLSLA+K+C EVGIRTT
Sbjct: 571 EASESEMIFLGLITFFDPPKDSAKQALWRLAEKGVKAKVLTGDSLSLAVKVCQEVGIRTT 630
Query: 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSL 540
HV TGPDLELL Q+ FHE VK ATVLARLTPTQKLRVVQSLQ VG HVVGFLGDGINDSL
Sbjct: 631 HVITGPDLELLDQDLFHETVKGATVLARLTPTQKLRVVQSLQMVGNHVVGFLGDGINDSL 690
Query: 541 ALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIAN 599
ALDAANVGISVDSG SVAKD ADIILLEKDLNVLVAGVERGR+TF NTMKYIKMS+IAN
Sbjct: 691 ALDAANVGISVDSGVSVAKDFADIILLEKDLNVLVAGVERGRLTFANTMKYIKMSVIAN 749
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359496900|ref|XP_002262892.2| PREDICTED: magnesium-transporting ATPase, P-type 1-like, partial [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/597 (82%), Positives = 536/597 (89%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
ML LV ISV LRFYQEYGSSKAAMKLSE VRCP+KVQRCAGRVVQ+ELIVQVDQRD+VPG
Sbjct: 168 MLVLVFISVSLRFYQEYGSSKAAMKLSELVRCPVKVQRCAGRVVQTELIVQVDQRDIVPG 227
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
DI+IFEPGDLFPGDVRLLTSKHLVVSQSSLTGES EKTADI+ED TPLLDLKNICFM
Sbjct: 228 DIIIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESGVTEKTADIKEDQSTPLLDLKNICFM 287
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
GT+VVSG GTGL+VSTGSKTY STMFS IGKQKPPD FEKGVRRIS+VLI VML+V T I
Sbjct: 288 GTSVVSGCGTGLIVSTGSKTYMSTMFSNIGKQKPPDYFEKGVRRISYVLIAVMLVVVTAI 347
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
+L YFTS +LS+SILFGISVACALTPQM PLIVNTSLAKGALAMARDRC+VKSL AIRD
Sbjct: 348 VLTCYFTSYDLSQSILFGISVACALTPQMLPLIVNTSLAKGALAMARDRCIVKSLTAIRD 407
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
MG+MDILCIDKTGTLTM+RAIMVNHLDSWG PKE VLRFAFLN+Y+KT+QKYPLDDAILA
Sbjct: 408 MGSMDILCIDKTGTLTMNRAIMVNHLDSWGLPKEKVLRFAFLNAYFKTEQKYPLDDAILA 467
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
YVYTNGYRFQ SKWKK+DEIPFDF RR+VSVILETE ++ S Q RFV+TKGALEE+
Sbjct: 468 YVYTNGYRFQPSKWKKIDEIPFDFTRRRVSVILETELNPKEDSYQSLERFVVTKGALEEI 527
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
I +C F++H+D IT+F+ E+Q+RILN+GEELS EGLRVIGVAVKRL + S S +D
Sbjct: 528 INLCCFIDHIDQDAITTFSLEDQQRILNMGEELSYEGLRVIGVAVKRLQRKTSEGSIDSD 587
Query: 421 GPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480
ES+M+FLGLITF+DPPKDSAKQALWRLA+KGVKAK+LTGDSLSLA+K+C EVGIRTT
Sbjct: 588 EASESEMIFLGLITFFDPPKDSAKQALWRLAEKGVKAKVLTGDSLSLAVKVCQEVGIRTT 647
Query: 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSL 540
HV TGPDLELL Q+ FHE VK ATVLARLTPTQKLRVVQSLQ VG HVVGFLGDGINDSL
Sbjct: 648 HVITGPDLELLDQDLFHETVKGATVLARLTPTQKLRVVQSLQMVGNHVVGFLGDGINDSL 707
Query: 541 ALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSII 597
ALDAANVGISVDSG SVAKD ADIILLEKDLNVLVAGVERGR+TF NTMKYIKMS+I
Sbjct: 708 ALDAANVGISVDSGVSVAKDFADIILLEKDLNVLVAGVERGRLTFANTMKYIKMSVI 764
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147854426|emb|CAN78584.1| hypothetical protein VITISV_016764 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/408 (82%), Positives = 368/408 (90%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
ML LV ISV LRFYQEYGSSKAAMKLSE VRCP+KVQRCAGRVVQ+ELIVQVDQRD+VPG
Sbjct: 380 MLVLVFISVSLRFYQEYGSSKAAMKLSELVRCPVKVQRCAGRVVQTELIVQVDQRDIVPG 439
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
DI+IFEPGDLFPGDVRLLTSKHLVVSQSSLTGES EKTADI+ED TPLLDLKNICFM
Sbjct: 440 DIIIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESGVTEKTADIKEDQSTPLLDLKNICFM 499
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
GT+VVSG GTGL+VSTGSKTY STMFS IGKQKPPD FEKGVRRIS+VLI VML+V T I
Sbjct: 500 GTSVVSGCGTGLIVSTGSKTYMSTMFSNIGKQKPPDYFEKGVRRISYVLIAVMLVVVTAI 559
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
+L YFTS +LS+SILFGISVACALTPQM PLIVNTSLAKGALAMARDRC+VKSL AIRD
Sbjct: 560 VLTCYFTSYDLSQSILFGISVACALTPQMLPLIVNTSLAKGALAMARDRCIVKSLTAIRD 619
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
MG+MDILCIDKTGTLTM+RAIMVNHLDSWG PKE VLRFAFLN+Y+KT+QKYPLDDAILA
Sbjct: 620 MGSMDILCIDKTGTLTMNRAIMVNHLDSWGLPKEKVLRFAFLNAYFKTEQKYPLDDAILA 679
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
YVYTNGYRFQ SKWKK+DEIPFDF RR+VSVILETE ++ S Q RFV+TKGALEE+
Sbjct: 680 YVYTNGYRFQPSKWKKIDEIPFDFTRRRVSVILETELNPKEDSYQSLERFVVTKGALEEI 739
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRL 408
I +C F++H+D IT+F+ E+Q+RILN+GEELS EGLRVIGVAVKRL
Sbjct: 740 INLCCFIDHIDQDAITTFSLEDQQRILNMGEELSYEGLRVIGVAVKRL 787
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|387819145|ref|YP_005679492.1| magnesium-translocating P-type ATPase [Clostridium botulinum H04402 065] gi|322807189|emb|CBZ04763.1| magnesium-translocating P-type ATPase [Clostridium botulinum H04402 065] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/794 (44%), Positives = 508/794 (63%), Gaps = 31/794 (3%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIV 63
+V IS L+F +E+ S+KAA KL + VR V R + I ++D ++VPGDIV
Sbjct: 114 MVTISGLLKFSEEFKSNKAAEKLKQLVRTTAAVYR------KESDIKEIDMSEIVPGDIV 167
Query: 64 IFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTA---DIREDHCTPLLDLKNICFM 120
GD+ P DVR++TSK L VSQSSLTGES EK + + ED LD NIC +
Sbjct: 168 YLAAGDMIPADVRIITSKDLFVSQSSLTGESEPVEKYSVLKNANEDLSVSELD--NICLL 225
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
GTN++SGS T +V+STG+ TY TM ST+ + K FEKG+ +S +LI M ++ I+
Sbjct: 226 GTNIISGSATAVVISTGNDTYLGTMASTLTETKNLTSFEKGINSVSMLLIKFMFVMVPIV 285
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
I+ T N +++LF IS+A LTP+M P+IV T+LAKGA+ MA+ + VVK L AI++
Sbjct: 286 FFINGITKGNWLQALLFAISIAVGLTPEMLPMIVTTNLAKGAVVMAKRKTVVKKLDAIQN 345
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
G MD+LC DKTGTLT+D+ ++ +L+ G + VLR A+LNS+Y+T + +D AIL
Sbjct: 346 FGAMDVLCTDKTGTLTLDKIVVERYLNIHGEQDQRVLRHAYLNSFYQTGLRNLMDIAILE 405
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
+ G++ + K+DEIPFDFVRR++SV+L+ R +ITKGA+EE+
Sbjct: 406 HGNEKGFKELEKNYLKVDEIPFDFVRRRMSVVLKNNE---------GKRQLITKGAVEEM 456
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
+ +C+ E+ G + T + + ++L + L+NEG+RVI +A QK+ ++ N+
Sbjct: 457 LSICTLAEY--KGEVVELTEDIKNKVLRMVTRLNNEGMRVIAIA------QKNNIADENN 508
Query: 421 GPIE--SDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478
+E S+MV +G + F DPPKDSAK A+ L + GV K+LTGD+ ++ +KIC EVG++
Sbjct: 509 FSVEDESNMVLMGYVGFLDPPKDSAKDAIEALNENGVAVKILTGDNDAVTLKICKEVGLK 568
Query: 479 TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGIND 538
T+V G ++E +S E E V+ V A+L+P QK R+++ LQ+ G H VGF+GDGIND
Sbjct: 569 ITNVLLGNEVEKMSDEELTEIVENTNVFAKLSPLQKSRIIKILQNKG-HTVGFMGDGIND 627
Query: 539 SLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIA 598
+ AL A+VGISVD+ +AK+ ADIILLEK+L VL GV GR FGN +KYIKM+ +
Sbjct: 628 AAALRQADVGISVDTAVDIAKESADIILLEKNLMVLEEGVIEGRKVFGNIIKYIKMTASS 687
Query: 599 NLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGL 658
N G V S+L+A+MFL P+ P LL QN Y + QI+IPWD M+ +Y++ P+ W+ + +
Sbjct: 688 NFGNVFSVLVASMFLPFLPMLPIHLLIQNLFYDISQISIPWDTMDKEYLRKPRKWNASDI 747
Query: 659 PMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEK 718
F++F GPV + D+ +WF ++A F+S WF+EGLL QTLI+H+IRT+K
Sbjct: 748 GRFMIFIGPVSSIFDIITYLVMWFVFKANTPAMQSLFQSGWFIEGLLSQTLIVHMIRTKK 807
Query: 719 IPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQ 778
IPFIQ A+ PVL T +I GI +PFT+ G +G LP YF +L+ + + Y + Q
Sbjct: 808 IPFIQSRATSPVLLLTGIIMVAGICLPFTSFGSSVGLQPLPFLYFPWLIGILLAYCVLTQ 867
Query: 779 LVKRIYILIYKKWL 792
+KR+YI + WL
Sbjct: 868 FIKRLYIKKFNSWL 881
|
Source: Clostridium botulinum H04402 065 Species: Clostridium botulinum Genus: Clostridium Family: Clostridiaceae Order: Clostridiales Class: Clostridia Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|170757726|ref|YP_001782506.1| magnesium-translocating P-type ATPase [Clostridium botulinum B1 str. Okra] gi|429246601|ref|ZP_19209916.1| magnesium-translocating P-type ATPase [Clostridium botulinum CFSAN001628] gi|169122938|gb|ACA46774.1| magnesium-translocating P-type ATPase [Clostridium botulinum B1 str. Okra] gi|428756370|gb|EKX78927.1| magnesium-translocating P-type ATPase [Clostridium botulinum CFSAN001628] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/794 (44%), Positives = 509/794 (64%), Gaps = 31/794 (3%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIV 63
+V IS L+F +E+ S+KAA KL + VR V R + I ++D ++VPGDIV
Sbjct: 114 MVTISGLLKFSEEFKSNKAAEKLKQLVRTTAAVYR------KESDIKEIDMSEIVPGDIV 167
Query: 64 IFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTA---DIREDHCTPLLDLKNICFM 120
GD+ P DVR++TSK L VSQSSLTGES EK + + ED LD NIC +
Sbjct: 168 YLAAGDMIPADVRIITSKDLFVSQSSLTGESEPVEKYSVLKNANEDLSVSELD--NICLL 225
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
GTN++SGS T +V+STG+ TY TM ST+ + K FEKG+ +S +LI M ++ I+
Sbjct: 226 GTNIISGSATAVVISTGNDTYLGTMASTLTETKNLTSFEKGINSVSMLLIKFMFVMVPIV 285
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
I+ T N +++LF IS+A LTP+M P+IV T+LAKGA+ MA+ + VVK L AI++
Sbjct: 286 FFINGITKGNWLQALLFAISIAVGLTPEMLPMIVTTNLAKGAVVMAKRKTVVKKLDAIQN 345
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
G MD+LC DKTGTLT+D+ ++ +L+ G + VLR A+LNS+Y+T + +D AIL
Sbjct: 346 FGAMDVLCTDKTGTLTLDKIVVERYLNIHGEQDQRVLRHAYLNSFYQTGLRNLMDIAILE 405
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
+ G++ + K+DEIPFDFVRR++SV+L+ R +ITKGA+EE+
Sbjct: 406 HGNEKGFKELEKNYLKVDEIPFDFVRRRMSVVLKNNE---------GKRQLITKGAVEEM 456
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
+ +C+ E+ G + T + + ++L + L+NEG+RVI +A QK+ ++ N+
Sbjct: 457 LSICTLAEY--KGEVVELTEDIKNKVLRMVTRLNNEGMRVIAIA------QKNNIADENN 508
Query: 421 GPIE--SDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478
+E S+MV +G + F DPPKDSAK A+ L + GV K+LTGD+ ++ +KIC EVG++
Sbjct: 509 FSVEDESNMVLMGYVGFLDPPKDSAKDAIEALNENGVAVKILTGDNDAVTLKICKEVGLK 568
Query: 479 TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGIND 538
T+V G ++E ++ E E V+ V A+L+P QK R+++ LQ+ G H VGF+GDGIND
Sbjct: 569 ITNVLLGNEVEKMNDEELTEIVENTNVFAKLSPLQKSRIIKILQNKG-HTVGFMGDGIND 627
Query: 539 SLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIA 598
+ AL A+VGISVD+ +AK+ ADIILLEK+L VL GV GR FGN +KYIKM+ +
Sbjct: 628 AAALRQADVGISVDTAVDIAKESADIILLEKNLMVLEEGVIEGRKVFGNIIKYIKMTASS 687
Query: 599 NLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGL 658
N G V S+L+A+MFL P+ P LL QN Y + QI+IPWD M+ +Y++ P+ W+ + +
Sbjct: 688 NFGNVFSVLVASMFLPFLPMLPIHLLIQNLFYDISQISIPWDTMDKEYLRKPRKWNASDI 747
Query: 659 PMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEK 718
F++F GPV + D+ +WF ++A F+S WF+EGLL QTLI+H+IRT+K
Sbjct: 748 GRFMIFIGPVSSIFDIITYLVMWFIFKANTPAMQSLFQSGWFIEGLLSQTLIVHMIRTKK 807
Query: 719 IPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQ 778
IPFIQ A+ PVL T +I A GI +PFT+ G +G LP YF +L+ + + Y + Q
Sbjct: 808 IPFIQSRATSPVLLLTGIIMAAGICLPFTSFGASVGLQPLPFLYFPWLIGILLAYCVLTQ 867
Query: 779 LVKRIYILIYKKWL 792
+KR+YI + WL
Sbjct: 868 FIKRLYIKKFNSWL 881
|
Source: Clostridium botulinum B1 str. Okra Species: Clostridium botulinum Genus: Clostridium Family: Clostridiaceae Order: Clostridiales Class: Clostridia Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|153940214|ref|YP_001392150.1| magnesium-translocating P-type ATPase [Clostridium botulinum F str. Langeland] gi|384463138|ref|YP_005675733.1| magnesium-importing ATPase [Clostridium botulinum F str. 230613] gi|152936110|gb|ABS41608.1| magnesium-importing ATPase [Clostridium botulinum F str. Langeland] gi|295320155|gb|ADG00533.1| magnesium-importing ATPase [Clostridium botulinum F str. 230613] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/794 (44%), Positives = 509/794 (64%), Gaps = 31/794 (3%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIV 63
+V IS L+F +E+ S+KAA KL + VR V R + I ++D ++VPGDIV
Sbjct: 114 MVTISGLLKFSEEFKSNKAAEKLKQLVRTTAAVYR------KESDIKEIDMSEIVPGDIV 167
Query: 64 IFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTA---DIREDHCTPLLDLKNICFM 120
GD+ P DVR++TSK L VSQSSLTGES EK + + ED LD NIC +
Sbjct: 168 YLAAGDMIPADVRIITSKDLFVSQSSLTGESEPVEKYSVLKNANEDLSVSELD--NICLL 225
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
GTN++SGS T +V+STG+ TY TM ST+ + K FEKG+ +S +LI M ++ I+
Sbjct: 226 GTNIISGSATAVVISTGNDTYLGTMASTLTETKNLTSFEKGINSVSMLLIKFMFVMVPIV 285
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
I+ T N +++LF IS+A LTP+M P+IV T+LAKGA+ MA+ + VVK L AI++
Sbjct: 286 FFINGITKGNWLQALLFAISIAVGLTPEMLPMIVTTNLAKGAVVMAKRKTVVKKLDAIQN 345
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
G MD+LC DKTGTLT+D+ ++ +L+ G + VLR A+LNS+Y+T + +D AIL
Sbjct: 346 FGAMDVLCTDKTGTLTLDKIVVERYLNIHGEQDQRVLRHAYLNSFYQTGLRNLMDIAILE 405
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
+ G++ + K+DEIPFDFVRR++SV+L+ R +ITKGA+EE+
Sbjct: 406 HGNEKGFKELEKNYLKVDEIPFDFVRRRMSVVLKNNE---------GKRQLITKGAVEEM 456
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
+ +C+ E+ G + T + + ++L + L+NEG+RVI +A QK+ ++ N+
Sbjct: 457 LSICTLAEY--KGEVVELTEDIKNKVLRMVTRLNNEGMRVIAIA------QKNNIADENN 508
Query: 421 GPI--ESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478
+ ES+MV +G + F DPPKDSAK A+ L + GV K+LTGD+ ++ +KIC EVG++
Sbjct: 509 FSVKDESNMVLMGYVGFLDPPKDSAKDAIEALNENGVAVKILTGDNDAVTLKICKEVGLK 568
Query: 479 TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGIND 538
T+V G ++E ++ E E V+ V A+L+P QK R+++ LQ+ G H VGF+GDGIND
Sbjct: 569 ITNVLLGNEVEKMNDEELTEIVENTNVFAKLSPLQKSRIIKILQNKG-HTVGFMGDGIND 627
Query: 539 SLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIA 598
+ AL A+VGISVD+ +AK+ ADIILLEK+L VL GV GR FGN +KYIKM+ +
Sbjct: 628 AAALRQADVGISVDTAVDIAKESADIILLEKNLMVLEEGVIEGRKVFGNIIKYIKMTASS 687
Query: 599 NLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGL 658
N G V S+L+A+MFL P+ P LL QN Y + QI+IPWD M+ +Y++ P+ W+ + +
Sbjct: 688 NFGNVFSVLVASMFLPFLPMLPIHLLIQNLFYDISQISIPWDTMDKEYLRKPRKWNASDI 747
Query: 659 PMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEK 718
F++F GPV + D+ +WF ++A F+S WF+EGLL QTLI+H+IRT+K
Sbjct: 748 GRFMIFIGPVSSIFDIITYLVMWFIFKANTPAMQSLFQSGWFIEGLLSQTLIVHMIRTKK 807
Query: 719 IPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQ 778
IPFIQ A+ PVL T +I A GI +PFT+ G +G LP YF +L+ + + Y + Q
Sbjct: 808 IPFIQSRATSPVLLLTGIIMAAGICLPFTSFGASVGLQPLPFLYFPWLIGILLAYCVLTQ 867
Query: 779 LVKRIYILIYKKWL 792
+KR+YI + WL
Sbjct: 868 FIKRLYIKKFNSWL 881
|
Source: Clostridium botulinum F str. Langeland Species: Clostridium botulinum Genus: Clostridium Family: Clostridiaceae Order: Clostridiales Class: Clostridia Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|226950303|ref|YP_002805394.1| magnesium-importing ATPase [Clostridium botulinum A2 str. Kyoto] gi|226842792|gb|ACO85458.1| magnesium-importing ATPase [Clostridium botulinum A2 str. Kyoto] | Back alignment and taxonomy information |
|---|
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/794 (44%), Positives = 508/794 (63%), Gaps = 31/794 (3%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIV 63
+V IS L+F +E+ S+KAA KL + VR V R + I ++D ++VPGDIV
Sbjct: 114 MVTISGLLKFSEEFKSNKAAEKLKQLVRTTAAVYR------KESDIKEIDMSEIVPGDIV 167
Query: 64 IFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTA---DIREDHCTPLLDLKNICFM 120
GD+ P DVR++TSK L VSQSSLTGES EK + + ED LD NIC +
Sbjct: 168 YLAAGDMIPADVRIITSKDLFVSQSSLTGESEPVEKYSVLKNANEDLSVSELD--NICLL 225
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
GTN++SGS T +V+STG+ TY TM ST+ + K FEKG+ +S +LI M ++ I+
Sbjct: 226 GTNIISGSATAVVISTGNDTYLGTMASTLTETKNLTSFEKGINSVSMLLIKFMFVMVPIV 285
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
I+ T N +++LF IS+A LTP+M P+IV T+LAKGA+ MA+ + VVK L AI++
Sbjct: 286 FFINGITKGNWLQALLFAISIAVGLTPEMLPMIVTTNLAKGAVVMAKRKTVVKKLDAIQN 345
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
G MD+LC DKTGTLT+D+ ++ +L+ G + VLR A+LNS+Y+T + +D AIL
Sbjct: 346 FGAMDVLCTDKTGTLTLDKIVVERYLNIHGEQDQRVLRHAYLNSFYQTGLRNLMDIAILE 405
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
+ G++ + K+DEIPFDFVRR++SV+L+ R +ITKGA+EE+
Sbjct: 406 HGNEKGFKELEKNYLKVDEIPFDFVRRRMSVVLKNNE---------GKRQLITKGAVEEM 456
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
+ +C+ E+ G + T + + ++L + L+NEG+RVI +A QK+ ++ N+
Sbjct: 457 LSICTLAEY--KGEVVELTEDIKNKVLRMVTRLNNEGMRVIAIA------QKNNIADENN 508
Query: 421 GPI--ESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478
+ ES+MV +G + F DPPKDSAK A+ L + GV K+LTGD+ ++ +KIC EVG++
Sbjct: 509 FTVKDESNMVLMGYVGFLDPPKDSAKDAIEALNENGVAVKILTGDNDAVTLKICKEVGLK 568
Query: 479 TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGIND 538
T+V G ++E +S E E V+ V A+L+P QK R+++ LQ+ G H VGF+GDGIND
Sbjct: 569 ITNVLLGNEVEKMSDEELTEIVENTNVFAKLSPLQKSRIIKILQNKG-HTVGFMGDGIND 627
Query: 539 SLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIA 598
+ AL A+VGISVD+ +AK+ ADIILLEK+L VL GV GR FGN +KYIKM+ +
Sbjct: 628 AAALRQADVGISVDTAVDIAKESADIILLEKNLMVLEEGVIEGRKVFGNIIKYIKMTASS 687
Query: 599 NLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGL 658
N G V S+L+A+MFL P+ P LL QN Y + QI+IPWD M+ +Y++ P+ W+ + +
Sbjct: 688 NFGNVFSVLVASMFLPFLPMLPIHLLIQNLFYDISQISIPWDTMDKEYLRKPRKWNASDI 747
Query: 659 PMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEK 718
F++F GPV + D+ +WF ++A F+S WF+EGLL QTLI+H+IRT+K
Sbjct: 748 GRFMIFIGPVSSIFDIITYLVMWFVFKANTPAMQSLFQSGWFIEGLLSQTLIVHMIRTKK 807
Query: 719 IPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQ 778
IPFIQ A+ PVL T +I GI +PFT+ G +G LP YF +L+ + + Y + Q
Sbjct: 808 IPFIQSRATSPVLLLTGIIMVAGICLPFTSFGASVGLQPLPFLYFPWLIGILLAYCVLTQ 867
Query: 779 LVKRIYILIYKKWL 792
+KR+YI + WL
Sbjct: 868 FIKRLYIKKFNSWL 881
|
Source: Clostridium botulinum A2 str. Kyoto Species: Clostridium botulinum Genus: Clostridium Family: Clostridiaceae Order: Clostridiales Class: Clostridia Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|168179304|ref|ZP_02613968.1| magnesium-translocating P-type ATPase [Clostridium botulinum NCTC 2916] gi|182669566|gb|EDT81542.1| magnesium-translocating P-type ATPase [Clostridium botulinum NCTC 2916] | Back alignment and taxonomy information |
|---|
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/794 (44%), Positives = 506/794 (63%), Gaps = 31/794 (3%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIV 63
+V IS L+F +E S+KAA KL + VR V R + I ++D ++VPGDIV
Sbjct: 114 MVTISGLLKFSEELKSNKAAEKLKQLVRTTAAVYR------KESDIKEIDMSEIVPGDIV 167
Query: 64 IFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTA---DIREDHCTPLLDLKNICFM 120
GD+ P DVR++TSK L VSQSSLTGES EK + + ED LD NIC +
Sbjct: 168 YLAAGDMIPADVRIITSKDLFVSQSSLTGESEPVEKYSILKNANEDLSVSELD--NICLL 225
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
GTN++SGS T +V+STG+ TY TM ST+ + K FEKG+ +S +LI M ++ I+
Sbjct: 226 GTNIISGSATAVVISTGNDTYLGTMASTLTETKNLTSFEKGINSVSMLLIKFMFVMVPIV 285
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
I+ T N E++LF IS+A LTP+M P+IV T+LAKGA+ MA+ + VVK L AI++
Sbjct: 286 FFINGITKGNWLEALLFAISIAVGLTPEMLPMIVTTNLAKGAVVMAKRKTVVKKLDAIQN 345
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
G MD+LC DKTGTLT+D+ ++ +L+ G + VLR A+LNS+Y+T + +D AIL
Sbjct: 346 FGAMDVLCTDKTGTLTLDKIVVERYLNIHGEQDQRVLRHAYLNSFYQTGLRNLMDIAILE 405
Query: 301 YVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEV 360
+ G++ + K+DEIPFDFVRR++SV+L+ R +ITKGA+EE+
Sbjct: 406 HGNEKGFKELEKNYLKVDEIPFDFVRRRMSVVLKNNE---------GKRQLITKGAVEEM 456
Query: 361 IKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420
+ C+ E+ G + T + + ++L + L+NEG+RVI +A QK+ ++ N+
Sbjct: 457 LSACTLAEY--KGEVVELTEDIKNKVLRMVTRLNNEGMRVIAIA------QKNNIADENN 508
Query: 421 GPI--ESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478
+ ES+MV +G + F DPPKDSAK A+ L + GV K+LTGD+ ++ +KIC EVG++
Sbjct: 509 FTVKDESNMVLMGYVGFLDPPKDSAKDAIKALNENGVAVKILTGDNDAVTLKICEEVGLK 568
Query: 479 TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGIND 538
T+V G ++E + + E V+ V A+L+P QK R+++ LQ+ G H VGF+GDGIND
Sbjct: 569 ITNVLLGNEVEKMGDDKLAEIVENTNVFAKLSPLQKSRIIKILQNKG-HTVGFMGDGIND 627
Query: 539 SLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIA 598
+ AL A+VGISVD+ +AK+ ADIILLEK+L VL GV GR FGN +KYIKM+ +
Sbjct: 628 AAALRQADVGISVDTAVDIAKESADIILLEKNLMVLEEGVIEGRKVFGNIIKYIKMTASS 687
Query: 599 NLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGL 658
N G V S+L+A+MFL P+ P LL QN Y + QI+IPWD M+ +Y++ P+ W+ + +
Sbjct: 688 NFGNVFSVLVASMFLPFLPMLPIHLLIQNLFYDISQISIPWDTMDKEYLRKPRKWNASDI 747
Query: 659 PMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEK 718
F++F GPV + D+ +WF ++A F+S WF+EGLL QTLI+H+IRT+K
Sbjct: 748 GRFMIFIGPVSSIFDIITYLVMWFVFKANTPAMQSLFQSGWFIEGLLSQTLIVHMIRTKK 807
Query: 719 IPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQ 778
IPFIQ A+ PVL T +I A GI IPFT+ G +G LP YF +L+ + + Y + Q
Sbjct: 808 IPFIQSRATAPVLLLTGIIMAAGIFIPFTSFGASVGLQPLPFLYFPWLIGILLAYCVLTQ 867
Query: 779 LVKRIYILIYKKWL 792
+KR+YI + WL
Sbjct: 868 FIKRLYIKKFNSWL 881
|
Source: Clostridium botulinum NCTC 2916 Species: Clostridium botulinum Genus: Clostridium Family: Clostridiaceae Order: Clostridiales Class: Clostridia Phylum: Firmicutes Superkingdom: Bacteria |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 792 | ||||||
| UNIPROTKB|P0ABB8 | 898 | mgtA "Mg2+ / Ni2+ transporting | 0.963 | 0.849 | 0.397 | 1e-146 | |
| DICTYBASE|DDB_G0268810 | 954 | DDB_G0268810 "magnesium-transl | 0.978 | 0.812 | 0.386 | 2.6e-143 | |
| TIGR_CMR|BA_4012 | 906 | BA_4012 "cation-transporting A | 0.540 | 0.472 | 0.269 | 4.8e-61 | |
| CGD|CAL0002178 | 917 | PMR1 [Candida albicans (taxid: | 0.415 | 0.358 | 0.286 | 7.2e-60 | |
| UNIPROTKB|Q5AFH9 | 917 | PMR1 "Putative uncharacterized | 0.415 | 0.358 | 0.286 | 7.2e-60 | |
| TIGR_CMR|GSU_1678 | 871 | GSU_1678 "cation-transport ATP | 0.792 | 0.721 | 0.280 | 3.3e-58 | |
| POMBASE|SPBC31E1.02c | 899 | pmr1 "P-type ATPase, calcium t | 0.760 | 0.669 | 0.270 | 2.4e-56 | |
| TIGR_CMR|BA_0405 | 888 | BA_0405 "cation-transporting A | 0.897 | 0.800 | 0.254 | 3.6e-56 | |
| UNIPROTKB|Q5R5K5 | 918 | ATP2C1 "Calcium-transporting A | 0.324 | 0.279 | 0.281 | 1.6e-52 | |
| FB|FBgn0052451 | 1034 | SPoCk "Secretory Pathway Calci | 0.320 | 0.245 | 0.276 | 1.6e-52 |
| UNIPROTKB|P0ABB8 mgtA "Mg2+ / Ni2+ transporting ATPase" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 311/783 (39%), Positives = 451/783 (57%)
Query: 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIV 63
+V IS L F QE S+KAA L V V R ++ + ++ +VPGDI+
Sbjct: 127 MVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWL-EIPIDQLVPGDII 185
Query: 64 IFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIRE-DHCTPLLDLKNICFMXX 122
GD+ P D+R+L ++ L V+Q+SLTGES EK A R+ +H PL + +CFM
Sbjct: 186 KLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKAATTRQPEHSNPL-ECDTLCFMGT 244
Query: 123 XXXXXXXXXXXXXXXXXXYTSTMFSTIGKQKP-PDDFEKGVRRISFVLICVMLIVATIII 181
+ + + +Q+ P+ F++G+ R+S +LI ML++A +++
Sbjct: 245 TVVSGTAQAMVIATGANTWFGQLAGRVSEQESEPNAFQQGISRVSMLLIRFMLVMAPVVL 304
Query: 182 LIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241
LI+ +T + E+ LF +SVA LTP+M P+IV ++LA+GA+ +++ + +VK L AI++
Sbjct: 305 LINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNF 364
Query: 242 GTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAY 301
G MDILC DKTGTLT D+ ++ NH D G E VL A+LNS+Y+T K LD A+L
Sbjct: 365 GAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEG 424
Query: 302 VYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVI 361
R AS+W+K+DEIPFDF RR++SV++ E+ TE ++ KGAL+E++
Sbjct: 425 TDEESARSLASRWQKIDEIPFDFERRRMSVVV-AEN-TEHHQ-------LVCKGALQEIL 475
Query: 362 KVCSFVEHMDSGPITSFTSEEQKRIXXXXXXXXXXXXRVIGVAVKRLLPQKSAQSNRNDG 421
VCS V H +G I ++I RV+ VA K LP + R D
Sbjct: 476 NVCSQVRH--NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATK-YLPAREGDYQRAD- 531
Query: 422 PIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH 481
ESD++ G I F DPPK++ AL L G+ K+LTGDS +A K+CHEVG+
Sbjct: 532 --ESDLILEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGE 589
Query: 482 VSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLA 541
V G D+E LS + +R T+ ARLTP K R+V L+ G HVVGF+GDGIND+ A
Sbjct: 590 VVIGSDIETLSDDELANLAQRTTLFARLTPMHKERIVTLLKREG-HVVGFMGDGINDAPA 648
Query: 542 LDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLG 601
L AA++GISVD +A++ ADIILLEK L VL GV GR TF N +KYIKM+ +N G
Sbjct: 649 LRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFG 708
Query: 602 GVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGLPMF 661
V S+L+A+ FL P+ P LL QN LY V Q+AIP+D ++ + ++ PQ W+ L F
Sbjct: 709 NVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRF 768
Query: 662 ILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIPF 721
++F GP+ + D+ +W+ + A F+S WFV GLL QTLI+H+IRT ++PF
Sbjct: 769 MIFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRVPF 828
Query: 722 IQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTEXXXXXXXXXXXXXXXXXXVGQLVK 781
IQ ASWP++ T+++ +GIA+PF+ + + + QLVK
Sbjct: 829 IQSCASWPLMIMTVIVMIVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLVK 888
Query: 782 RIY 784
Y
Sbjct: 889 GFY 891
|
|
| DICTYBASE|DDB_G0268810 DDB_G0268810 "magnesium-translocating P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
Identities = 317/821 (38%), Positives = 476/821 (57%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
++ +VL+S LRFY+E+ SSKA + L V+ + V R + V +E VQ+D DVVPG
Sbjct: 151 VMFMVLLSAVLRFYEEHKSSKAFIHLKSLVKTTVTVLRTI-KGVSTE--VQIDIEDVVPG 207
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
DIV + GD+FPGDVR+L S L VSQSSLTGE EK D E+ T + D N+ M
Sbjct: 208 DIVPLKAGDVFPGDVRILESNSLFVSQSSLTGEFLPVEKGPDASEEQTT-IFDTPNVGIM 266
Query: 121 XXXXXXXXXXXXXXXXXXXXYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATII 180
Y S++ + + + F+ GV++++++L+ +++ I+
Sbjct: 267 STNIVSGSGIGVVFDTGCRTYISSISEILTSTQTTNAFDVGVKKVAYLLMGFGVVLVPIV 326
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
I+I+ T+ + +S +FG+SVA LTP+M P+I+N +LAKGA M++ + +VK L +I++
Sbjct: 327 IVINGLTTHDWVDSTMFGLSVAVGLTPEMLPMILNANLAKGAADMSKKKTIVKQLHSIQN 386
Query: 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILA 300
MG MDILC DKTGTLT D + +++ +VLR++F NS ++ K LD++I++
Sbjct: 387 MGAMDILCSDKTGTLTEDNVRLDSYIGGDKKELADVLRYSFFNSSFQKGLKNVLDNSIIS 446
Query: 301 YVYTN-------------------GYRFQASKWKKL-------DEIPFDFVRRKVSVILE 334
Y G+ + ++L DE PFDF RR+VS+IL
Sbjct: 447 YYNNQFAPGTADGSNKNHHEQEAIGHGAEVKPDERLIEGYALVDEFPFDFTRRRVSIIL- 505
Query: 335 TESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRIXXXXXXXX 394
S E + G +I KGA+EEV+ C+ + DS PI T + ++++
Sbjct: 506 --SQPESK-----GNLLICKGAVEEVLSCCTHLAVRDSEPIL-LTPDLKEQMLSITNELN 557
Query: 395 XXXXRVIGVAVKRL---LPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLA 451
RV+ VA K +P +ND E + F G ++F DPPK A+ L
Sbjct: 558 VDGLRVLSVATKVFSTDIPSDYEYDVKND---EGGLTFYGFLSFIDPPKSDCAGAIEMLR 614
Query: 452 KKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTP 511
G++ K+LTGD+L++A KIC +VGI TT V +G +LE S E F E V+R T+ A+LTP
Sbjct: 615 GNGIEIKVLTGDNLAVARKICKDVGIDTTRVISGIELENASPEEFDELVERCTLFAKLTP 674
Query: 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDL 571
QK VV++L+ KH VGFLGDG+ND+LAL A++GISVD+ ++AKD +DIILLEK L
Sbjct: 675 IQKYNVVKALKK-HKHTVGFLGDGVNDALALREADIGISVDTATNIAKDASDIILLEKSL 733
Query: 572 NVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS 631
V+ V GR+T NT+KYIKM+ +N G V S+LIA+ +L PL P Q+LTQN LY
Sbjct: 734 TVINTAVRTGRITHANTIKYIKMAASSNFGNVFSMLIASAWLPFIPLKPLQMLTQNLLYD 793
Query: 632 VGQIAIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMN 691
QI+IPWD ++ +Y+K P WS L F++F GP+ + DV ++W+Y ++
Sbjct: 794 FSQISIPWDNVDEEYLKIPHPWSVRSLFKFMVFLGPISSIFDVGIFSYMWWYLGWTTEVT 853
Query: 692 VVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTAIGD 751
F++ W+VEGL+ Q I+H+IRT K+PFIQ ASW + +T++I+AI IAIP+T +
Sbjct: 854 QSSFQTGWYVEGLITQVFIVHMIRTVKVPFIQRWASWQLTVNTVIIAAICIAIPYTPLSP 913
Query: 752 VMGFTEXXXXXXXXXXXXXXXXXXVGQLVKRIYILIYKKWL 792
+ + + Q+VK+IY+ ++ +WL
Sbjct: 914 YLLMEKLPAMYYPGLASTFVGYFLLTQIVKKIYMAVFGEWL 954
|
|
| TIGR_CMR|BA_4012 BA_4012 "cation-transporting ATPase, E1-E2 family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 416 (151.5 bits), Expect = 4.8e-61, Sum P(2) = 4.8e-61
Identities = 124/460 (26%), Positives = 230/460 (50%)
Query: 293 PLDDAILAYVYTNGYRFQA--SKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRF 350
P + A++A G +A K++ + E+PFD R+ +SVI+ DR + +F
Sbjct: 404 PTEGALVAAAMKAGITREALKGKFEIIRELPFDSTRKMMSVIVR------DREGK---KF 454
Query: 351 VITKGALEEVIKVCSFVEHMDSG-PITSFTSEEQKRIXXXXXXXXXXXXRVIGVAVKRLL 409
V+TKGA + ++++ + D P++ +K + R I VA K
Sbjct: 455 VVTKGAPDVLLQMSQTILWGDKQQPLSELY---RKEVQAAIHSLGSQALRTIAVAFK--- 508
Query: 410 PQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAI 469
P K S ++ +E D + +G+ DPP+ KQA+ + G++ ++TGD A+
Sbjct: 509 PLKVTDSIEHERDVEKDFMLVGIQGMIDPPRPEVKQAVKECREAGIRTVMITGDHKVTAM 568
Query: 470 KICHEVGI--RTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKH 527
I ++ I + V G +L + E V+ V AR++P KL++V++LQ+ G H
Sbjct: 569 AIAEQLSILPQGGRVVEGVELASMDVEELENVVEDTYVFARVSPEHKLKIVKALQNKG-H 627
Query: 528 VVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFG 586
+V GDG+ND+ A+ A++GI++ +G VAK+ + ++LL+ + + + ++ GR +
Sbjct: 628 IVAMTGDGVNDAPAIKTADIGIAMGITGTDVAKEASSLVLLDDNFATIKSAIKEGRNIYE 687
Query: 587 NTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGD 645
N K+I+ + +N+G +L +L A + P+ P Q+L N + + +A+ DK EGD
Sbjct: 688 NIRKFIRYLLASNVGEILVMLFAMLLALPLPMVPIQILWVNLVTDGLPAMALGLDKAEGD 747
Query: 646 YVK-TPQIWSEN----GLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWF 700
+K TP+ E GL I+ G ++ VT + F+ Y + N++ + ++ F
Sbjct: 748 VMKRTPRHPKEGVFARGLAWKIISRG--FLIGAVTLVAFIIAYNQHPNELK--YAQTVAF 803
Query: 701 VEGLLMQTLIIHLIRTEKIPFIQEVASWPVLSSTLVISAI 740
+L Q + + R+E F + L ++IS +
Sbjct: 804 ATLVLAQLIHVFDCRSEHSVFHRNPFGNVYLVGAVIISLL 843
|
|
| CGD|CAL0002178 PMR1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 384 (140.2 bits), Expect = 7.2e-60, Sum P(3) = 7.2e-60
Identities = 102/356 (28%), Positives = 185/356 (51%)
Query: 283 NSYYKTD-QKY---PLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESI 338
N+ Y T+ +KY P D A++ + G + ++L E+PF R+ ++V + T I
Sbjct: 408 NARYSTESEKYVGNPSDIALVECLPHFGLEDMRGQKQRLYELPFSSNRKYMAVCVHTGDI 467
Query: 339 TEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRIXXXXXXXXXXXX 398
+ + I KGA E+++++C + ++G + T ++ I
Sbjct: 468 EKSET--------IAKGATEKILQLCDRY-YDENGSVKPLTEAIEESIHEKSRSLARDGL 518
Query: 399 RVIGVAVK-RLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKA 457
RV+ A + +K+ + P +D+VF GLI DPP+ Q++ RL + GV
Sbjct: 519 RVLAFAKNNKKFDEKTTE------P--TDLVFCGLIGMKDPPRPKVGQSIARLMQGGVHV 570
Query: 458 KLLTGDSLSLAIKICHEVGIRTT--H-VSTGPDLELLSQESFHERVKRATVLARLTPTQK 514
++TGDS + A+ I ++GI H V TG ++ LS+E+ + + +V AR TP K
Sbjct: 571 IMITGDSPTTAVNIARQIGIPVVGDHAVLTGDQIDSLSEEALTKAIHDVSVFARTTPEHK 630
Query: 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNV 573
+ +V++LQ G +V GDG+ND+ AL A++GI++ +G VAK+ AD++L + D +
Sbjct: 631 VTIVKALQRRGD-IVAMTGDGVNDAPALKLADIGIAMGKNGTDVAKEAADMVLTDDDFST 689
Query: 574 LVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFL 629
+++ +E G+ F N +I + ++ + + ++T F +PL Q+L N L
Sbjct: 690 ILSAIEEGKGIFNNIQNFITFQLSTSIAALTLVALSTFFGLPNPLNAMQILWINIL 745
|
|
| UNIPROTKB|Q5AFH9 PMR1 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 384 (140.2 bits), Expect = 7.2e-60, Sum P(3) = 7.2e-60
Identities = 102/356 (28%), Positives = 185/356 (51%)
Query: 283 NSYYKTD-QKY---PLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESI 338
N+ Y T+ +KY P D A++ + G + ++L E+PF R+ ++V + T I
Sbjct: 408 NARYSTESEKYVGNPSDIALVECLPHFGLEDMRGQKQRLYELPFSSNRKYMAVCVHTGDI 467
Query: 339 TEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRIXXXXXXXXXXXX 398
+ + I KGA E+++++C + ++G + T ++ I
Sbjct: 468 EKSET--------IAKGATEKILQLCDRY-YDENGSVKPLTEAIEESIHEKSRSLARDGL 518
Query: 399 RVIGVAVK-RLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKA 457
RV+ A + +K+ + P +D+VF GLI DPP+ Q++ RL + GV
Sbjct: 519 RVLAFAKNNKKFDEKTTE------P--TDLVFCGLIGMKDPPRPKVGQSIARLMQGGVHV 570
Query: 458 KLLTGDSLSLAIKICHEVGIRTT--H-VSTGPDLELLSQESFHERVKRATVLARLTPTQK 514
++TGDS + A+ I ++GI H V TG ++ LS+E+ + + +V AR TP K
Sbjct: 571 IMITGDSPTTAVNIARQIGIPVVGDHAVLTGDQIDSLSEEALTKAIHDVSVFARTTPEHK 630
Query: 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNV 573
+ +V++LQ G +V GDG+ND+ AL A++GI++ +G VAK+ AD++L + D +
Sbjct: 631 VTIVKALQRRGD-IVAMTGDGVNDAPALKLADIGIAMGKNGTDVAKEAADMVLTDDDFST 689
Query: 574 LVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFL 629
+++ +E G+ F N +I + ++ + + ++T F +PL Q+L N L
Sbjct: 690 ILSAIEEGKGIFNNIQNFITFQLSTSIAALTLVALSTFFGLPNPLNAMQILWINIL 745
|
|
| TIGR_CMR|GSU_1678 GSU_1678 "cation-transport ATPase, E1-E2 family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 600 (216.3 bits), Expect = 3.3e-58, P = 3.3e-58
Identities = 192/685 (28%), Positives = 331/685 (48%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
++ +V+++ + F QEY + +A L E + A V++S + V R++VPG
Sbjct: 83 IITIVVLNAVIGFAQEYRAERAMAALRE-----MSGNYAA--VLRSGEHLSVPAREIVPG 135
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
D+V+ E G++ P DVRL + HL +++LTGES AEK ++ D PL D +N+ +
Sbjct: 136 DLVLLEAGNVVPADVRLAEAVHLKTVEAALTGESLPAEKLSEQLFDSDLPLGDRRNMAYK 195
Query: 121 XXXXXXXXXXXXXXXXXXXXYTSTMFSTIGKQ---KPPDDFEKGVRRISFVLICVMLIVA 177
+ + + ++ K P ++ + L +L +
Sbjct: 196 GTVVAYGRGIGIAVATGMGTELGRIAAMLQQEAGTKTP--LQRRLADFGKRLALAVLAIC 253
Query: 178 TIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGA 237
++ + + L +L IS+A A P+ P +V +LA GA M R +++ L A
Sbjct: 254 AVVFTLGLLRGEPLLLMLLTSISLAVAAIPEALPAVVTITLALGARKMVRQNALIRRLPA 313
Query: 238 IRDMGTMDILCIDKTGTLTMDRAIMVN----HLD-----SWGFPKENVLRFAF-LNSYYK 287
+ +G++ +C DKTGTLT+++ + N L+ S G + A L + +
Sbjct: 314 VETLGSVTYVCSDKTGTLTLNKMTVENVWPGDLEGTDAGSSGVSAATLFTTALVLCNDAR 373
Query: 288 TDQKY-----PLDDAILAYVYTNGY-RFQASKWK-KLDEIPFDFVRRKVSVILETESITE 340
D + P + A+LAY G R + ++ E+PFD RK + T
Sbjct: 374 EDSEGGLVGDPTETALLAYGRACGVIRTEIEALHPRVAELPFDS-ERKCMTTFHRDGDTV 432
Query: 341 DRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRIXXXXXXXXXXXXRV 400
TKGA+E V+ S ++G + +E +R+ RV
Sbjct: 433 ---------LAFTKGAVE-VLTARSVAMLTNNGEVP-LDRQEIERVTVEMAARGL---RV 478
Query: 401 IGVAVKR--LLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAK 458
+ +A++R LP + +S+ +ESD++FLGL DPP++ A +A+ + G+
Sbjct: 479 LALAMRRWPYLPDR-LESDE----VESDLIFLGLAGMMDPPREEAAEAVAQCRNAGITPV 533
Query: 459 LLTGDSLSLAIKICHEVGIRTTH---VSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515
++TGD A I + I V TG DL LS E F RV++ V AR+ P QKL
Sbjct: 534 MITGDHPLTARIIARRLAILEDDGDAVLTGRDLAELSPEEFEARVEQIRVYARVAPEQKL 593
Query: 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVL 574
+V++LQ+ G H V GDG+ND+ AL A++GI++ +G V+K+ + ++LL+ + +
Sbjct: 594 TIVKALQNRG-HFVAMTGDGVNDAPALKRADIGIAMGITGTDVSKEASAMVLLDDNFATI 652
Query: 575 VAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLY-SVG 633
V V GR + N +K+I SI +N+G ++++ +A F PL P Q+L N L S+
Sbjct: 653 VRAVREGRRIYANILKFITYSITSNIGTLVAITLAPFFGLPLPLLPIQILWLNLLCDSLP 712
Query: 634 QIAIPWDKMEGDYVKTPQIWSENGL 658
+A+ + E D + P + + G+
Sbjct: 713 GLALAGEPAERDVMSRPPVDPKEGV 737
|
|
| POMBASE|SPBC31E1.02c pmr1 "P-type ATPase, calcium transporting Pmr1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 585 (211.0 bits), Expect = 2.4e-56, P = 2.4e-56
Identities = 179/661 (27%), Positives = 314/661 (47%)
Query: 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGD 61
LA+V++ V + F QEY S ++ L+ V P C V++S + +VPGD
Sbjct: 89 LAIVIV-VTVGFVQEYRSEQSLKALNNLV--P---HYC--NVIRSGKTEHIVASKLVPGD 140
Query: 62 IVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMX 121
+VI + GD P D+R++ + L + +S+LTGE+ +K+++ + + L + NI FM
Sbjct: 141 LVILQIGDRVPADLRIVEATELEIDESNLTGENSPRKKSSEAISSNIS-LTERNNIAFMG 199
Query: 122 XXXXXXXXXXXXXXXXXXXYTSTMFSTIGK-QKPPDDFEKGVRRISFVLICVMLIVATII 180
+F T+ + +KP + + + L + LI +I
Sbjct: 200 TLVRHGHGRGIVVATGSDTEFGRVFLTMQQTEKPKTPLQNSMDDLGKQLSLISLIGIAVI 259
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240
+L+ +F KN E + G+S+A A P+ P+IV +LA G L M++ R +++ L ++
Sbjct: 260 VLVGFFQGKNWLEMLTIGVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIIRRLPSVET 319
Query: 241 MGTMDILCIDKTGTLTMDRAIMVN-----HLDSWGFPK-ENV---------LRFAFLNSY 285
+G+++++C DKTGTLTM+ + L ++ P+ E++ + A L +
Sbjct: 320 LGSVNVICSDKTGTLTMNHMTVTKIYTCGMLAAFSLPESEHIELSVRRTVGIEKALLAAA 379
Query: 286 YKTDQK-YPLDDAILAYVYT-NGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDR- 342
+ K + D+IL G+ + + + R S I E +E +
Sbjct: 380 LCNNSKVHNKADSILDTTCPWAGFPVDVALIECSERFGLKDPRETYSRISEVSFSSERKY 439
Query: 343 ---SSQF-SGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRIXXXXXXXXXXXX 398
+ Q+ S + KGA E+V+ C++ D G T+E ++ I
Sbjct: 440 MSVAVQYNSSKMNFMKGATEQVLSSCAYFSDQD-GVQHELTAEMKENIQRNEFEMAASGL 498
Query: 399 RVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAK 458
R+I VA +N+ +VF GL DPP+ ++++ L GV+
Sbjct: 499 RIIAVA-------SGINTNK--------LVFHGLFGINDPPRPQVRESVQYLMTGGVRVI 543
Query: 459 LLTGDSLSLAIKICHEVGIRT---------THVSTGPDLELLSQESFHERVKRATVLARL 509
++TGDS+ AI I +G+ + TG L+ L S + V R V AR
Sbjct: 544 MITGDSVVTAISIARSLGMAIPSNDEEAIRNYALTGAQLDDLDSSSLRDAVSRVVVFART 603
Query: 510 TPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLE 568
TP K+++V++LQS+G VV GDG+ND+ AL A++GI++ G VAK+ AD+IL +
Sbjct: 604 TPQHKMKIVEALQSLGD-VVAMTGDGVNDAPALKLADIGIAMGRQGTDVAKEAADMILTD 662
Query: 569 KDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNF 628
+++ VE G+ F N +I + ++ + + I+++F +PL Q+L N
Sbjct: 663 DSFATILSAVEEGKGIFNNIKNFITFQLSTSVAALSLIAISSVFGFQNPLNAMQILWINI 722
Query: 629 L 629
L
Sbjct: 723 L 723
|
|
| TIGR_CMR|BA_0405 BA_0405 "cation-transporting ATPase, E1-E2 family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 583 (210.3 bits), Expect = 3.6e-56, P = 3.6e-56
Identities = 197/774 (25%), Positives = 358/774 (46%)
Query: 1 MLALVLI-SVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVP 59
++ALV++ + + QE + +A L + V+R EL ++ VVP
Sbjct: 83 IIALVVVLNAVIGVVQESKAEQALEALKKMATPKAIVKR------DGEL-KEIPSEHVVP 135
Query: 60 GDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTA----DIREDHCTPLLDLK 115
GDIV+ + G P D+RL+ + +L V +S+LTGES +K A ++ D PL D K
Sbjct: 136 GDIVMLDAGRYIPCDLRLIETANLKVEESALTGESVPVDKDAIYHPSMQSDEQVPLGDQK 195
Query: 116 NICFMXXXXXXXXXXXXXXXXXXXXYTSTMFSTIGKQKPPDDF---EKGVRRISFVLICV 172
N+ FM + + + + DD +K + ++ L V
Sbjct: 196 NMAFMSTLVTYGRGVGVAVETGMNSQIGKIATLL--HEADDDMTPLQKSLAQVGKYLGFV 253
Query: 173 MLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVV 232
+ + ++ LI + ++ E + IS+A A P+ P IV+ LA G M + ++
Sbjct: 254 AVAICIVMFLIGFLQGRDTLEMFMTAISLAVAAIPEGLPAIVSIVLAIGVQRMIKQNVII 313
Query: 233 KSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWG----FPKENV----LRFAFLNS 284
+ L A+ +G++ I+C DKTGTLT ++ + V H S + NV R N
Sbjct: 314 RKLPAVEALGSVTIICSDKTGTLTQNK-MTVTHFYSDNTYDQLERLNVNNDTQRLLLENM 372
Query: 285 YYKTDQKY--------PLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETE 336
D Y P + A+L V + + Q +K+ E + ++ T
Sbjct: 373 VLCNDASYNNESQTGDPTEIALL--VAGSTFNMQKDHLEKIHERVNELPFDSDRKMMSTV 430
Query: 337 SITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRIXXXXXXXXXX 396
T D S + +TKGA+++++ +C+ + +G I T +++ +I
Sbjct: 431 H-TYDESY-----YSMTKGAIDKLLPLCTHI--FKNGKIEGLTEDDKNQILEAAEVMSQE 482
Query: 397 XXRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVK 456
RV+ A K+ S+ + +E +++F+GL+ DPP+ K ++ K G++
Sbjct: 483 ALRVLSFAFKQY-----NSSDVDIDHLEENLIFIGLVGMIDPPRTEVKDSISECKKAGIR 537
Query: 457 AKLLTGDSLSLAIKICHEVGI--RTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514
++TGD A I E+GI + + G +L+ +S ++ V AR++P K
Sbjct: 538 TVMITGDHKDTAFAIAKELGIAEEISEIMIGTELDNISDTELANKINHLHVFARVSPEHK 597
Query: 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNV 573
+++V++L++ G ++V GDG+ND+ +L A+VG+++ +G VAK AD++L + + +
Sbjct: 598 VKIVKALRAKG-NIVSMTGDGVNDAPSLKQADVGVAMGITGTDVAKGAADVVLTDDNFSS 656
Query: 574 LVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLY-SV 632
+V VE GR + N K I + N G +++L +A + PL P +L N + ++
Sbjct: 657 IVKAVEEGRNIYRNIKKSILFLLSCNFGEIIALFLAILLGWATPLRPIHILWVNLITDTL 716
Query: 633 GQIAIPWDKMEGDYVKT-PQIWSEN---GLPMFILFNGPVCILCDVTALFFLWFYYEAYN 688
+++ D + D +K P+ E+ G F++FNG V L + A +Y
Sbjct: 717 PALSLGVDPEDPDVMKEKPRHAKESLFSGSVPFLIFNGFVIGLLTLIAFIAGAKFYTGDT 776
Query: 689 QMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQEVASWPVLSSTLVISAIGI 742
+ +F E L+ + + + F Q V S+ + S T I +IGI
Sbjct: 777 NLFPLFPER--IDEDALLHAQTMAFV---VLSFSQLVHSFNLRSRTKSIFSIGI 825
|
|
| UNIPROTKB|Q5R5K5 ATP2C1 "Calcium-transporting ATPase type 2C member 1" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 345 (126.5 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 76/270 (28%), Positives = 145/270 (53%)
Query: 421 GPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI--R 478
GP + FLGL+ DPP+ K+A+ L GV K++TGDS AI I +G+ +
Sbjct: 529 GPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAIAIASRLGLYSK 588
Query: 479 TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGIND 538
T+ +G +++ + + + V + V R +P K+++++SLQ G VV GDG+ND
Sbjct: 589 TSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSLQKNGS-VVAMTGDGVND 647
Query: 539 SLALDAANVGISV-DSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSII 597
++AL AA++G+++ +G V K+ AD+IL++ D +++ +E G+ + N +++ +
Sbjct: 648 AVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLS 707
Query: 598 ANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIA--IPWDKMEGDYV-KTPQIWS 654
++ + + +AT+ +PL Q+L N + G A + + ++ D + K P+ W
Sbjct: 708 TSIAALTLISLATLMNFPNPLNAMQILWINIIMD-GPPAQSLGVEPVDKDVIRKPPRNWK 766
Query: 655 ENGLPMFILFN---GPVCILCDVTALFFLW 681
++ L ++ + I+C LF W
Sbjct: 767 DSILTKNLILKILVSSIIIVCGT--LFVFW 794
|
|
| FB|FBgn0052451 SPoCk "Secretory Pathway Calcium atpase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 73/264 (27%), Positives = 145/264 (54%)
Query: 426 DMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVST- 484
D+++ GL+ DPP+ ++++ L + GV+ K++TGD+ A+ I + +GI T H T
Sbjct: 651 DLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIANLIGIDTIHHQTL 710
Query: 485 -GPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALD 543
G +++ +++ + +V R++P KL +V+SLQ G ++VG GDG+ND +AL
Sbjct: 711 SGQEMDQMNEHQLDKVANNVSVFYRVSPRHKLEIVKSLQRSG-NIVGMTGDGVNDGVALK 769
Query: 544 AANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGG 602
A++GI++ +G V K+ AD+IL+ D + ++A +E G+ F N +++ + ++
Sbjct: 770 KADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAA 829
Query: 603 VLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIA--IPWDKMEGDYVKT-PQIWSENGLP 659
+ + +AT+ +PL Q+L N + G A + + ++ D +K P+ + +
Sbjct: 830 LALIALATLMDIANPLNAMQILWINIIMD-GPPAQSLGVEPVDHDVLKQKPRNVKQPMIT 888
Query: 660 MFILFNGPVCILCDVTALFFLWFY 683
++ N V + + L LW +
Sbjct: 889 KSVVVN--VLLSASIIVLGTLWVF 910
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| D0ZTB2 | ATMA_SALT1 | 3, ., 6, ., 3, ., 2 | 0.4201 | 0.9633 | 0.8458 | yes | no |
| P36640 | ATMA_SALTY | 3, ., 6, ., 3, ., 2 | 0.4201 | 0.9633 | 0.8458 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 792 | |||
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 0.0 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 0.0 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-180 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 4e-88 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-87 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 6e-81 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-54 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 9e-41 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-40 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-39 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-29 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-28 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 9e-28 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-25 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 9e-23 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 9e-22 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-21 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-20 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 9e-17 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 4e-15 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-14 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-14 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-13 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-13 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 6e-13 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-11 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-10 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-09 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 7e-09 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 3e-07 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-06 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 8e-05 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-04 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.002 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 761 bits (1968), Expect = 0.0
Identities = 338/790 (42%), Positives = 484/790 (61%), Gaps = 24/790 (3%)
Query: 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRC---AGRVVQSELIVQVDQRDVVP 59
+V IS L F QE S+KAA L V V R G E+ + +VP
Sbjct: 130 LMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPI----DQLVP 185
Query: 60 GDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICF 119
GDI+ GD+ P D+R+L ++ L V+Q+SLTGES EK A R+ + L+ +CF
Sbjct: 186 GDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCF 245
Query: 120 MGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKGVRRISFVLICVMLIVAT 178
MGTNVVSG+ +V++TG+ T+ + + +Q P+ F++G+ R+S++LI ML++A
Sbjct: 246 MGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAP 305
Query: 179 IIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238
+++LI+ +T + E+ LF +SVA LTP+M P+IV ++LA+GA+ +++ + +VK L AI
Sbjct: 306 VVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAI 365
Query: 239 RDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAI 298
++ G MDILC DKTGTLT D+ ++ NH D G E VL A+LNS+Y+T K LD A+
Sbjct: 366 QNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAV 425
Query: 299 LAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALE 358
L V R AS+W+K+DEIPFDF RR++SV++ + +I KGALE
Sbjct: 426 LEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENT---------EHHQLICKGALE 476
Query: 359 EVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNR 418
E++ VCS V H +G I +RI + + L+ +GLRV+ VA K L ++ R
Sbjct: 477 EILNVCSQVRH--NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQ-R 533
Query: 419 NDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478
D ESD++ G I F DPPK++ AL L GV K+LTGDS +A K+CHEVG+
Sbjct: 534 AD---ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD 590
Query: 479 TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGIND 538
V G D+E LS + +R T+ ARLTP K R+V L+ G HVVGF+GDGIND
Sbjct: 591 AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREG-HVVGFMGDGIND 649
Query: 539 SLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIA 598
+ AL AA++GISVD +A++ ADIILLEK L VL GV GR TF N +KYIKM+ +
Sbjct: 650 APALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASS 709
Query: 599 NLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGL 658
N G V S+L+A+ FL P+ P LL QN LY V Q+AIP+D ++ + ++ PQ W+ L
Sbjct: 710 NFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADL 769
Query: 659 PMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEK 718
F++F GP+ + D+ +W+ + A F+S WFV GLL QTLI+H+IRT +
Sbjct: 770 GRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR 829
Query: 719 IPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQ 778
IPFIQ A+WP++ TL++ A+GIA+PF+ + + LPL+YF +L+ + GY T+ Q
Sbjct: 830 IPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQ 889
Query: 779 LVKRIYILIY 788
LVK Y Y
Sbjct: 890 LVKGFYSRRY 899
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 761 bits (1966), Expect = 0.0
Identities = 343/802 (42%), Positives = 504/802 (62%), Gaps = 25/802 (3%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
+L +VL+S LRF+QE+ S+KAA L VR V R + ++ R++VPG
Sbjct: 117 ILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRR-EIPMRELVPG 175
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESW----------TAEKTADIREDHCTP 110
DIV GD+ P DVRL+ S+ L +SQ+ LTGE+ A K+AD D
Sbjct: 176 DIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGS 235
Query: 111 LLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLI 170
LLDL NICFMGTNVVSG+ T +VV+TGS+TY ++ +I + F++GV +S++LI
Sbjct: 236 LLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLI 295
Query: 171 CVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRC 230
ML++ +++LI+ FT + E++LF ++VA LTP+M P+IV+++LAKGA+AMAR +
Sbjct: 296 RFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKV 355
Query: 231 VVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQ 290
VVK L AI++ G MD+LC DKTGTLT DR I+ +HLD G E VL+ A+LNS++++
Sbjct: 356 VVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSFHQSGM 415
Query: 291 KYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRF 350
K +D A++A+ N + + ++K+DE+PFDFVRR++SV++ ED Q
Sbjct: 416 KNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVV------EDAQGQ---HL 466
Query: 351 VITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLP 410
+I KGA+EE++ V + V D + ++R+L L E + +G RV+ VA + +
Sbjct: 467 LICKGAVEEMLAVATHV--RDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPG 524
Query: 411 QKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK 470
+S E D+V G +TF DPPK+SA A+ L + GV K+LTGD+ + K
Sbjct: 525 GESRAQYSTAD--ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK 582
Query: 471 ICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVG 530
IC EVG+ G ++E + + V+ TV A+LTP QK RV+++LQ+ G H VG
Sbjct: 583 ICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANG-HTVG 641
Query: 531 FLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMK 590
FLGDGIND+ AL A+VGISVDSGA +AK+ ADIILLEK L VL GV +GR TFGN +K
Sbjct: 642 FLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIK 701
Query: 591 YIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTP 650
Y+ M+ +N G V S+L+A+ F+ P+ LL QN +Y + Q+++PWDKM+ ++++ P
Sbjct: 702 YLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDISQLSLPWDKMDKEFLRKP 761
Query: 651 QIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLI 710
+ W + F+L+ GP + D+T +WF + A + F+S WF+EGLL QTL+
Sbjct: 762 RKWDAKNIGRFMLWIGPTSSIFDITTFALMWFVFAANSVEMQALFQSGWFIEGLLSQTLV 821
Query: 711 IHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLF 770
+H++RT+KIPFIQ A+ PVL +T +I AIGI IPF+ +G ++G LP +YF +L
Sbjct: 822 VHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATL 881
Query: 771 IGYFTVGQLVKRIYILIYKKWL 792
+GY V Q +KR YI + +W
Sbjct: 882 LGYCLVAQGMKRFYIRRFGQWF 903
|
Length = 903 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 743 bits (1919), Expect = 0.0
Identities = 324/792 (40%), Positives = 487/792 (61%), Gaps = 19/792 (2%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKV-QRCAGRVVQSELIVQVDQRDVVP 59
+ +VL S L F QE + +AA L V+ V + S V +D +VP
Sbjct: 94 IALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDA--LVP 151
Query: 60 GDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICF 119
GD++ GD+ P D R+++++ L ++QS+LTGES EK + + +L+ +N+CF
Sbjct: 152 GDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCF 211
Query: 120 MGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATI 179
MGTNV+SG +V++TGS T+ ++ +++ F+KGV+ +S +LI ML++ +
Sbjct: 212 MGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPV 271
Query: 180 IILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIR 239
+++I+ + E+ LF ++VA LTP+M P+IV+++LAKGA+ M++ + +VK L AI+
Sbjct: 272 VLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQ 331
Query: 240 DMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAIL 299
+ G MDILC DKTGTLT D+ + H+DS G E VL+ A+LNSY++T K LD A+L
Sbjct: 332 NFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVL 391
Query: 300 AYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEE 359
A + + R AS+WKK+DEIPFDF RR++SV++E + E +I KGA+EE
Sbjct: 392 AKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRA--EVTR-------LICKGAVEE 442
Query: 360 VIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRN 419
++ VC+ G + + + E+ + ++ E++ +G+RVI VA K L A +
Sbjct: 443 MLTVCTHKRF--GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTL-KVGEADFTKT 499
Query: 420 DGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479
D E ++ G + F DPPK+S K+A+ L K G+ K+LTGD+ + +IC EVGI
Sbjct: 500 D---EEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA 556
Query: 480 THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDS 539
G D+E LS E +++ + ARLTP QK R++ L+ G H VGFLGDGIND+
Sbjct: 557 NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAG-HTVGFLGDGINDA 615
Query: 540 LALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIAN 599
AL A+VGISVD+ A +AK+ +DIILLEK L VL GV GR TFGN +KY+KM+ +N
Sbjct: 616 PALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSN 675
Query: 600 LGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIWSENGLP 659
G V S+L+A+ F+ P+ LL QN LY Q+ +PWDKM+ +++K P W + G+
Sbjct: 676 FGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQWEQKGMG 735
Query: 660 MFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKI 719
F+L GPV + D+ +WF + A F+S WFV GLL QTL++H+IRTEKI
Sbjct: 736 RFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEKI 795
Query: 720 PFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQL 779
PFIQ A+ PV+ +TL++ A+GI IPF+ +G +G LPL+YF +L+ + +GY QL
Sbjct: 796 PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYMATMQL 855
Query: 780 VKRIYILIYKKW 791
VK YI + +W
Sbjct: 856 VKTFYIRRFGEW 867
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 540 bits (1394), Expect = e-180
Identities = 257/833 (30%), Positives = 411/833 (49%), Gaps = 68/833 (8%)
Query: 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGD 61
L +V+I+ L F QEY + KA L + KV R V ++ ++VPGD
Sbjct: 110 LLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFV-------EIPASELVPGD 162
Query: 62 IVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPL-LDLKNICFM 120
IV+ E GD+ P D+RLL S L V +S+LTGES EK A PL LD N+ F
Sbjct: 163 IVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFS 222
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPD-DFEKGVRRISFVLICVMLIVATI 179
GT VVSG G+VV+TG +T + + +K ++ + ++ L+ + L++ +
Sbjct: 223 GTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGAL 282
Query: 180 IILIDYFTSKN-LSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238
+ ++ F N L ES L +++A A P+ P +V +LA GA MA+D +V+SL AI
Sbjct: 283 VFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAI 342
Query: 239 RDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPK------------ENVLRFAFLNSYY 286
+G++D++C DKTGTLT ++ + + G L A L +
Sbjct: 343 ETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSV 402
Query: 287 KTDQKY------PLDDAILAYVYTNGYRFQASKWKK----LDEIPFDFVRRKVSVILETE 336
++ P + A++ + G+ S + L EIPFD R+++SVI++T+
Sbjct: 403 TPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTD 462
Query: 337 SITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNE 396
+ KGA E +++ C + + T E + + +EL++E
Sbjct: 463 E---------GKYILFVKGAPEVILERCKSIGE-----LEPLTEEGLRTLEEAVKELASE 508
Query: 397 GLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVK 456
GLRV+ VA K+L A+ + IESD+VFLGL DPP++ K+A+ L + G+K
Sbjct: 509 GLRVLAVAYKKL---DRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIK 565
Query: 457 AKLLTGDSLSLAIKICHEVGIRT----THVSTGPDLELLSQESFHERVKRATVLARLTPT 512
++TGD + AI I E GI V G +L+ LS E E V+ +V AR++P
Sbjct: 566 VWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625
Query: 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGIS-VDSGASVAKDLADIILLEKDL 571
QK R+V++LQ G HVV GDG+ND+ AL AA+VGI+ G AK+ ADI+LL+ +
Sbjct: 626 QKARIVEALQKSG-HVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNF 684
Query: 572 NVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMF-LQTDPLTPKQLLTQNFLY 630
+V V GR + N K+I + N+G VL+LLI ++F L PLTP QLL N L
Sbjct: 685 ATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLT 744
Query: 631 SVGQ-IAIPWDKMEGDYVKTPQ------IWSENGLPMFILFNGPVCILCDVTALFFLWFY 683
+A+ + E D +K P +++ FIL G + + +
Sbjct: 745 DSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLG 804
Query: 684 YEAYNQM---NVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQEV--ASWPVLSSTLVIS 738
+ A ++ F +L+Q L+ +R+ PF+ + ++ + + LVI
Sbjct: 805 FIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVII 864
Query: 739 AIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILIYKKW 791
+ + I F ++ F PL+ F +L+ + + + +V +Y L +K
Sbjct: 865 ILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYIVVSELYKLKSRKL 917
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 297 bits (761), Expect = 4e-88
Identities = 187/664 (28%), Positives = 318/664 (47%), Gaps = 71/664 (10%)
Query: 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVI 64
+LI V + F QEY S K+ L++ V + R + E ++ +VPGD+V
Sbjct: 90 ILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREG----KLEHVLA---STLVPGDLVC 142
Query: 65 FEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEK-TADIREDHCTPLLDLKNICFMGTN 123
GD P D+R++ + L + +S+LTGE+ K TA I L + NI FMGT
Sbjct: 143 LSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTL 202
Query: 124 VVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDFEKGVRRISFVLICVMLIVATIIIL 182
V G G G+VV TGS T +F + +KP +K + + L V V +I L
Sbjct: 203 VRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICL 262
Query: 183 IDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMG 242
+ +F K+ E +S+A A P+ P+IV +LA G L M++ R +V+ L ++ +G
Sbjct: 263 VGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLG 322
Query: 243 TMDILCIDKTGTLTMDRA---------IMVNHLDSWGFPK-------------------E 274
+++++C DKTGTLT + + L++ +
Sbjct: 323 SVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVS 382
Query: 275 NVLRFAFLNSYYKTDQKY------PLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRK 328
+L L + K + P D A++ + G + ++ E+PF R+
Sbjct: 383 RILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKW 442
Query: 329 VSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILN 388
++V +DRS KGA E+V+K C++ + D G + T +++ I
Sbjct: 443 MAVKCVHR---QDRS-----EMCFMKGAYEQVLKYCTYYQKKD-GKTLTLTQQQRDVIQE 493
Query: 389 LGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALW 448
E+++ GLRVI A GP + + FLGL+ DPP+ K+A+
Sbjct: 494 EAAEMASAGLRVIAFA---------------SGPEKGQLTFLGLVGINDPPRPGVKEAVT 538
Query: 449 RLAKKGVKAKLLTGDSLSLAIKICHEVGI--RTTHVSTGPDLELLSQESFHERVKRATVL 506
L GV+ ++TGDS A+ I +G+ +T+ +G L+ + + + V + V
Sbjct: 539 TLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVF 598
Query: 507 ARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-DSGASVAKDLADII 565
AR +P K+++V++LQ G VV GDG+ND+ AL A++G+++ +G VAK+ AD+I
Sbjct: 599 ARASPEHKMKIVKALQKRGD-VVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMI 657
Query: 566 LLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLT 625
L + D +++ +E G+ F N +I + ++ + + +AT+ +PL Q+L
Sbjct: 658 LTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILW 717
Query: 626 QNFL 629
N L
Sbjct: 718 INIL 721
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 286 bits (733), Expect = 3e-87
Identities = 179/624 (28%), Positives = 278/624 (44%), Gaps = 106/624 (16%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
+L LVL+ V L Q+ + LS + + V ++ +D+VPG
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLS---DRLVNTRPA---TVLRNGWKEIPAKDLVPG 55
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
D+V+ + G+ P D LL+ V +S+LTGES KTA ++ F
Sbjct: 56 DVVLVKSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQ---SGTITGDLVFA 111
Query: 121 GTNVVSGSGTGLVVSTGSKT---------YTSTMFSTIGKQKPPDDFEKGVRRISFVLIC 171
GT V G+ +V TG T T T + K D E F+L
Sbjct: 112 GTYVFGGTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKR-DRLEN----FIFILFL 166
Query: 172 VMLIVATIIILIDYFTSKN-LSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRC 230
++L +A + L N + +++L + V + P P V +LA G +A+
Sbjct: 167 LLLALAVFLYLFIRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGI 226
Query: 231 VVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVN-HLDSWGFPKENVLRFAFLNSYYKTD 289
+V++L A+ ++G +D LC DKTGTLT ++ + ++D + L N Y D
Sbjct: 227 LVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNN-YLSGD 285
Query: 290 QKYPLDDAILAYVYTNGYRFQASK-WKKLDEIPFDFVRRKVSVILETESITEDRSSQFSG 348
P++ A+L G + +K +K LD PF V +++SVI+ET
Sbjct: 286 ---PMEKALLKSAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPD---------GS 333
Query: 349 RFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRL 408
+ KGA E +++ C+ EE+ EL+ +GLRV+ A K L
Sbjct: 334 DLLFVKGAPEFILERCN-------------NYEEKY------LELARQGLRVLAFASKEL 374
Query: 409 LPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLA 468
E D+ FLGLITF DP + AK+ + L G+K ++TGD++ A
Sbjct: 375 ---------------EDDLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTA 419
Query: 469 IKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHV 528
I E+GI V AR++P QKL++V++LQ G H+
Sbjct: 420 KAIAKELGI--------------------------DVFARVSPEQKLQIVEALQKKG-HI 452
Query: 529 VGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNT 588
V GDG+ND+ AL A+VGI++ AK ADI+LL+ DL+ +V V+ GR F N
Sbjct: 453 VAMTGDGVNDAPALKKADVGIAM-----GAKAAADIVLLDDDLSAIVKAVKEGRKIFSNI 507
Query: 589 MKYIKMSIIANLGGVLSLLIATMF 612
I +I NL + L+ +
Sbjct: 508 KSNIFWAIAYNLILIPLALLLIVI 531
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 274 bits (703), Expect = 6e-81
Identities = 173/697 (24%), Positives = 301/697 (43%), Gaps = 86/697 (12%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
+L L+L++ + F +E + A L + + +V R + ++ ++VPG
Sbjct: 61 ILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLR------DGKW-QEIPASELVPG 113
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
D+V + GD+ P D RL ++ V Q++LTGES K +I +
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTG-------------DIAYS 160
Query: 121 GTNVVSGSGTGLVVSTGSKTY---TSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVA 177
G+ V G +V +TG T+ + + + +K + +I LI ++ ++
Sbjct: 161 GSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGS--GHLQKILSKIGLFLIVLIGVLV 218
Query: 178 TIIILIDYFTSKN-LSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLG 236
I +++ +F E + F + + P P +++ ++A GA +A+ + +V L
Sbjct: 219 LIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLT 278
Query: 237 AIRDMGTMDILCIDKTGTLTMDRAIMVNHLDS---WGFPKENVLRFAFLNSYYKTDQKYP 293
AI ++ MDILC DKTGTLT++ + GF K++VL +A L S + + +
Sbjct: 279 AIEELAGMDILCSDKTGTLTLN--KLSIDEILPFFNGFDKDDVLLYAALAS--REEDQDA 334
Query: 294 LDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVIT 353
+D A+L + +K L+ +PFD V ++ +E + RF +T
Sbjct: 335 IDTAVLGSAKD--LKEARDGYKVLEFVPFDPVDKRTEATVEDPETGK--------RFKVT 384
Query: 354 KGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKS 413
KGA + ++ +C E ++++ +EL++ G R +GVA
Sbjct: 385 KGAPQVILDLC----DNK--------KEIEEKVEEKVDELASRGYRALGVART------- 425
Query: 414 AQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH 473
+G FLGL+ +DPP+ K+ + R GV+ K++TGD L++A +
Sbjct: 426 ----DEEGRWH----FLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETAR 477
Query: 474 EVG----IRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVV 529
+G I T V D E V+ A A + P K +V+ LQ H+V
Sbjct: 478 RLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFPEHKYEIVEILQK-RGHLV 536
Query: 530 GFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTM 589
G GDG+ND+ AL A+VGI+V A+ ADI+L E L+V+V + R F
Sbjct: 537 GMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMK 596
Query: 590 KYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKT 649
Y+ I + V + + L P ++ L + I +D ++ K
Sbjct: 597 SYVIYRIAETIRIVFFFGLLILILNFY-FPPIMVVIIAILNDGTIMTIAYDNVK--PSKL 653
Query: 650 PQIWSENGLPMFILFNGPVC---ILCDVTALFFLWFY 683
PQ W+ + +F L T L
Sbjct: 654 PQRWN-----LREVFTMSTVLGIYLVISTFLLLAIAL 685
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 3e-54
Identities = 154/628 (24%), Positives = 262/628 (41%), Gaps = 80/628 (12%)
Query: 51 QVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTP 110
Q+ D+V GDIV GD+ P D ++ L + +SS+TGES D
Sbjct: 179 QISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGES-----------DPIKK 227
Query: 111 LLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDD------------- 157
GT V GSG LV + G ++ + + +
Sbjct: 228 GPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLI 287
Query: 158 --FEKGVRRISFVLICVMLIVATII--ILIDYFTSKNLSESILFGISVACALTPQMFPLI 213
F G + F+++ + + I ++ + + +++ P+ PL
Sbjct: 288 GKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLA 347
Query: 214 VNTSLAKGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPK 273
V +LA M +D +V+ L A MG+ +C DKTGTLT + +V G+
Sbjct: 348 VTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQ-----GYIG 402
Query: 274 ENVLRF------------------AFLNSYYKTDQKY---------PLDDAILAYVYTNG 306
E LNS + + A+L +
Sbjct: 403 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLL 462
Query: 307 --YRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVC 364
Y+ ++ K + PF+ R+ +SV++ + S R KGA E V+K C
Sbjct: 463 RDYQEVRAEEKVVKIYPFNSERKFMSVVV--------KHSGGKYRE-FRKGASEIVLKPC 513
Query: 365 SFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIE 424
+ G T + +++ R ++ E L+++ LR I +A + P+ + R D P
Sbjct: 514 RKRLDSN-GEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPE---EFPRKDYP-N 568
Query: 425 SDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVST 484
+ +G++ DP + ++A+ + G+ +++TGD++ A I GI T
Sbjct: 569 KGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLA 628
Query: 485 --GPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLAL 542
G + L E + + VLAR +P K +V L+ +G+ VV GDG ND+ AL
Sbjct: 629 MEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGE-VVAVTGDGTNDAPAL 687
Query: 543 DAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLG 601
A+VG S+ SG VAK+ +DIILL+ + +V V+ GR + N K+++ + N+
Sbjct: 688 KLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVV 747
Query: 602 GVLSLLIATMFLQTDPLTPKQLLTQNFL 629
V+ + + T PLT QLL N +
Sbjct: 748 AVILTFVGSCISSTSPLTAVQLLWVNLI 775
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 161 bits (408), Expect = 9e-41
Identities = 105/338 (31%), Positives = 159/338 (47%), Gaps = 36/338 (10%)
Query: 319 EIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSF 378
E PFD S I SI ED + + KGA E +I+ CS D I+
Sbjct: 530 EFPFD------SEIKRMASIYEDNHGETYN--IYAKGAFERIIECCSSSNGKDGVKISPL 581
Query: 379 TSEEQKRILNLGEELSNEGLRVIGVAVKRL-------LPQKSAQSNRNDGPIESDMVFLG 431
+++ I+ E L+ EGLRV+ A K K+ NR ESD+ FLG
Sbjct: 582 EDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATA--ESDLEFLG 639
Query: 432 LITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH---------- 481
LI YDPP++ + A+ + + G+ +LTGD A I EVGI +
Sbjct: 640 LIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMD 699
Query: 482 --VSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDS 539
V TG + LS E + V+AR P K++++++L K GDG+NDS
Sbjct: 700 SMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHR-RKAFCAMTGDGVNDS 758
Query: 540 LALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIA 598
+L ANVGI++ +G+ VAKD +DI+L + + ++ +E GR F N MK++ +
Sbjct: 759 PSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAE 818
Query: 599 NLGGVLSLLIATMF-----LQTDPLTPKQLLTQNFLYS 631
N+ + L+I F PL+P ++L + S
Sbjct: 819 NVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITS 856
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 2e-40
Identities = 96/368 (26%), Positives = 171/368 (46%), Gaps = 25/368 (6%)
Query: 270 GFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKV 329
G E L+ + K + + N K+KKL + F R+ +
Sbjct: 379 GEATEAALK-VLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSM 435
Query: 330 SVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNL 389
SV+ + + + F KGA E V++ C+ + + D T + + IL++
Sbjct: 436 SVLCKPST----GNKLFV------KGAPEGVLERCTHILNGDGR-AVPLTDKMKNTILSV 484
Query: 390 GEELS-NEGLRVIGVAVKRLLPQKS---AQSNRNDGPIESDMVFLGLITFYDPPKDSAKQ 445
+E+ + LR + +A K + + N IESD+ F+G++ DPP+
Sbjct: 485 IKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVAD 544
Query: 446 ALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI------RTTHVSTGPDLELLSQESFHER 499
A+ + G++ ++TGD+ A IC +GI T TG + + +
Sbjct: 545 AIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAA 604
Query: 500 VKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAK 559
+ A + +R+ P+ K +V+ LQ G +V GDG+ND+ AL A++GI++ SG VAK
Sbjct: 605 CRSAVLFSRVEPSHKSELVELLQEQG-EIVAMTGDGVNDAPALKKADIGIAMGSGTEVAK 663
Query: 560 DLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLT 619
+ +D++L + + +VA VE GR + N ++I+ I +N+G V+ + + + L
Sbjct: 664 EASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLI 723
Query: 620 PKQLLTQN 627
P QLL N
Sbjct: 724 PVQLLWVN 731
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 2e-39
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 21/238 (8%)
Query: 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGD 61
L LVLI+ L YQEY + KA L + + A V++ ++ ++V GD
Sbjct: 3 LLLVLINALLEAYQEYRARKALKALKKLL------PPTAATVIRDGKEEEIPADELVVGD 56
Query: 62 IVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMG 121
IV+ +PGD P D R++ L V +S+LTGES EK+ + F G
Sbjct: 57 IVLLKPGDRVPADGRII-EGSLEVDESALTGESLPVEKSR-------------GDTVFAG 102
Query: 122 TNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPD-DFEKGVRRISFVLICVMLIVATII 180
T V+SG +V +TG T + + + K ++ + +++ +L+ ++L +A ++
Sbjct: 103 TVVLSGELKVIVTATGEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILV 162
Query: 181 ILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238
LI +F + E++L ++V A P+ PL V +LA GA +A+ +VK+L A+
Sbjct: 163 FLIWFFRGGDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSAL 220
|
Length = 222 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 2e-29
Identities = 82/269 (30%), Positives = 135/269 (50%), Gaps = 20/269 (7%)
Query: 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDI 62
A+V+I+ C +YQE SSK V V R ++ ++ VV GD+
Sbjct: 112 AVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKM-------SINAEQVVVGDL 164
Query: 63 VIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGT 122
V + GD P D+R+++++ V SSLTGES ++ + H PL + +NI F T
Sbjct: 165 VEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEF--THENPL-ETRNIAFFST 221
Query: 123 NVVSGSGTGLVVSTGSKT---YTSTMFSTIGKQKPP--DDFEKGVRRISFVLICVMLIVA 177
N V G+ G+VV+TG +T +++ S + K P + E + I+ V + + +
Sbjct: 222 NCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFF 281
Query: 178 TIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGA 237
+ +++ Y E+++F I + A P+ V L A MAR C+VK+L A
Sbjct: 282 ILSLILGY----TWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 337
Query: 238 IRDMGTMDILCIDKTGTLTMDRAIMVNHL 266
+ +G+ +C DKTGTLT +R + V H+
Sbjct: 338 VETLGSTSTICSDKTGTLTQNR-MTVAHM 365
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 1e-28
Identities = 74/220 (33%), Positives = 107/220 (48%), Gaps = 15/220 (6%)
Query: 50 VQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCT 109
+ +D+VPGDIV GD P D+R+L+ K L V QS LTGES + K + D
Sbjct: 84 SVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERA 143
Query: 110 PLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK--------QKPPDDF-EK 160
D KN+ F GT VV+G G+VV TG T + + QK D+F E
Sbjct: 144 VNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGEL 203
Query: 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALT----PQMFPLIVNT 216
+ I LIC+++ V I D + ++ +A AL P+ P ++ T
Sbjct: 204 LSKVIG--LICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITT 261
Query: 217 SLAKGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLT 256
LA G MA+ +V+ L ++ +G ++C DKTGTLT
Sbjct: 262 CLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLT 301
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 9e-28
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 55/229 (24%)
Query: 390 GEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWR 449
E L +EG V+ VAV DG +G+I D + AK+A+
Sbjct: 509 IEALESEGKTVVFVAV--------------DG------KLVGVIALADELRPDAKEAIAA 548
Query: 450 LAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL 509
L G+K +LTGD+ A I E+GI V A L
Sbjct: 549 LKALGIKVVMLTGDNRRTAEAIAKELGI-------------------------DEVRAEL 583
Query: 510 TPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEK 569
P K +V+ LQ+ G V +GDGIND+ AL AA+VGI++ SG VA + AD++L+
Sbjct: 584 LPEDKAEIVRELQAEG-RKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRD 642
Query: 570 DLNVLVAGVERGRVTFGNTMK--------YIKMSIIANLGGVLSLLIAT 610
DL+ + ++ R T +K Y ++I GG+L+ IA
Sbjct: 643 DLSAVPEAIDLSRATRRI-IKQNLFWAFGYNAIAIPLAAGGLLTPWIAA 690
|
Length = 713 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 1e-25
Identities = 102/373 (27%), Positives = 171/373 (45%), Gaps = 45/373 (12%)
Query: 313 KWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDS 372
+ K+ EIPF+ + I E E + R ++ KGA E +++ CS + +
Sbjct: 447 RNPKVVEIPFNSTNKYQLSIHENEDPRDPR------HLLVMKGAPERILERCSSI--LIH 498
Query: 373 GPITSFTSEEQKRILNLGEELSNEGLRVIG-----VAVKRLLPQKSAQSNRNDGPIESDM 427
G E ++ N EL G RV+G + ++ ++ + P + ++
Sbjct: 499 GKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD-NL 557
Query: 428 VFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH------ 481
F+GLI+ DPP+ + A+ + G+K ++TGD A I VGI +
Sbjct: 558 CFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVED 617
Query: 482 --------------------VSTGPDLELLSQESFHERVKRAT--VLARLTPTQKLRVVQ 519
V G DL+ ++ E E +K T V AR +P QKL +V+
Sbjct: 618 IAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVE 677
Query: 520 SLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGV 578
Q G +V GDG+NDS AL A++G+++ +G+ V+K AD+ILL+ + +V GV
Sbjct: 678 GCQRQGA-IVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGV 736
Query: 579 ERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAI 637
E GR+ F N K I ++ +N+ + LI + PL +L + V I++
Sbjct: 737 EEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISL 796
Query: 638 PWDKMEGDYVKTP 650
++K E D +K
Sbjct: 797 AYEKAESDIMKRQ 809
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 9e-23
Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 31/191 (16%)
Query: 423 IESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAK-LLTGDSLSLAIKICHEVGIRTTH 481
+ D LG+I D + AK+A+ L + G +LTGD+ S A + E+GI
Sbjct: 369 VAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--- 425
Query: 482 VSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLA 541
V A L P KL +V+ LQ VV +GDGIND+ A
Sbjct: 426 ----------------------EVHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPA 462
Query: 542 LDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLG 601
L AA+VGI++ +G+ VA + ADI+LL DL+ L ++ R T + IK ++ LG
Sbjct: 463 LAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSR----KTRRIIKQNLAWALG 518
Query: 602 GVLSLLIATMF 612
L +
Sbjct: 519 YNLVAIPLAAG 529
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 9e-22
Identities = 70/297 (23%), Positives = 130/297 (43%), Gaps = 47/297 (15%)
Query: 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDI 62
A++ +++ + F QEY + K L V R +S+ I D D+VPGDI
Sbjct: 89 AIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNG----KSDAI---DSHDLVPGDI 141
Query: 63 VIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADI--REDHCTPLLDLKNICFM 120
+ + GD P D+RL+ +K+ ++ LTGES K A ++ TP+ D N+ F
Sbjct: 142 CLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFS 201
Query: 121 GTNVVSGSGTGLVVSTGSKTYT----------STMFSTIGKQKPPDD------------- 157
+ V G G+ ++T + +F K P
Sbjct: 202 SSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKK 261
Query: 158 -------------FEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACA 204
+ + +++ +L C+ +I A I++ F E ++ I +A +
Sbjct: 262 VTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDK--EVAIYAICLAIS 319
Query: 205 LTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAI 261
+ P+ +++ ++A GA M++ +V+ L A+ +G ++ +C DKTGT+T + I
Sbjct: 320 IIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMI 376
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 99.3 bits (248), Expect = 1e-21
Identities = 76/288 (26%), Positives = 123/288 (42%), Gaps = 51/288 (17%)
Query: 348 GRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLG--EELSNEGLR------ 399
GR + EV+++ + E S P+ + ++ N+ EE+ EG+R
Sbjct: 260 GRPKVVDVVPAEVLRLAAAAEQASSHPLARAIVDYARKRENVESVEEVPGEGVRAVVDGG 319
Query: 400 VIGVAVKRLLPQKSAQSNRNDG----PIESDMVFLGLITFYDPPKDSAKQALWRLAKKGV 455
+ + R L + G + D +LG I D P+ A +A+ L G+
Sbjct: 320 EVRIGNPRSLEAAVGARPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGI 379
Query: 456 -KAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514
K +LTGD ++A ++ E+GI H A L P K
Sbjct: 380 EKVVMLTGDRRAVAERVARELGIDEVH-------------------------AELLPEDK 414
Query: 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-DSGASVAKDLADIILLEKDLNV 573
L +V+ L+ V +GDGIND+ AL AA+VGI++ SG+ VA + AD++LL DL+
Sbjct: 415 LEIVKELREKY-GPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSR 473
Query: 574 LVAGVERGR---------VTFGNTMKYIKMSIIANLGGVLSLLIATMF 612
L + R V + + + + L GVL L +A +
Sbjct: 474 LPQAIRLARRTRRIVKQNVVIALGIILLLI--LLALFGVLPLWLAVLG 519
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 1e-20
Identities = 135/546 (24%), Positives = 201/546 (36%), Gaps = 117/546 (21%)
Query: 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGD 61
L +V +S Y K +L + V P V V+++ V + ++VPGD
Sbjct: 197 LCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVI-----VIRNGKWVTIASDELVPGD 251
Query: 62 IVIFEP--GDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDL----- 114
IV P D LL+ +V++S LTGES K D+ DL
Sbjct: 252 IVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVPVLKFP--IPDNGDDDEDLFLYET 308
Query: 115 --KNICFMGTNVVS-----GSGTGL--VVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRI 165
K++ F GT ++ G L VV TG T + +I KP +
Sbjct: 309 SKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKP---RVFKFYKD 365
Query: 166 SFVLICVMLIVA------TIIILIDYFTSKN--LSESILFGISVACALTPQMFPLIVNTS 217
SF I + ++A TII LI + S+ V P + +N S
Sbjct: 366 SFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNS 425
Query: 218 LAKGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWG------- 270
LA L C S I G +D+ C DKTGTLT D LD G
Sbjct: 426 LA--RLKKKGIFCT--SPFRINFAGKIDVCCFDKTGTLTEDG------LDLRGVQGLSGN 475
Query: 271 -------------FPKENVLRFAFLNSYYKTDQKY---PLDDAILAYVYTNGYRFQASKW 314
P A +S K + K PLD + G+ +
Sbjct: 476 QEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEAT---GWTLEEDDE 532
Query: 315 KKLDEIPFDFVR--------------------RKVSVILETESITEDRSSQFSGRFVITK 354
VR +++SVI+ T E F K
Sbjct: 533 SAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTN--DERSPDAF------VK 584
Query: 355 GALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRL--LPQK 412
GA E + +CS P T + ++ +L + EG RV+ +A K L L +
Sbjct: 585 GAPETIQSLCS--------PETVPSDYQE--VLK---SYTREGYRVLALAYKELPKLTLQ 631
Query: 413 SAQS-NRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKI 471
AQ +R+ +ES++ FLG I F +P K K+ + L + ++ ++TGD+ A+ +
Sbjct: 632 KAQDLSRDA--VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHV 689
Query: 472 CHEVGI 477
E GI
Sbjct: 690 ARECGI 695
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 94.3 bits (235), Expect = 5e-20
Identities = 70/264 (26%), Positives = 111/264 (42%), Gaps = 48/264 (18%)
Query: 367 VEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQ--KSAQSNRNDGPIE 424
V + + IT + K I +G E + EG + K L K+ G
Sbjct: 336 VSYAKAKGITLSQVSDFKAIPGIGVEGTVEGHTIQLGNEKLLGENGLKTDGEVEEGGGTT 395
Query: 425 SDMVF-----LGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479
S +V G++ D K AK+ + L ++G++ +LTGD+ A + E+GI
Sbjct: 396 SVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI-- 453
Query: 480 THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDS 539
V A + P K +++ LQ G VV +GDGIND+
Sbjct: 454 -----------------------ENVRAEVLPDDKAALIKKLQEKG-KVVAMVGDGINDA 489
Query: 540 LALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMK--------Y 591
AL A+VGI++ +G VA + AD++LL DLN + ++ R T +K Y
Sbjct: 490 PALAQADVGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRR-IKQNLLWAFGY 548
Query: 592 ------IKMSIIANLGGVLSLLIA 609
I ++ G +LS +A
Sbjct: 549 NVIAIPIAAGVLYPAGILLSPAVA 572
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 84.2 bits (208), Expect = 9e-17
Identities = 136/626 (21%), Positives = 236/626 (37%), Gaps = 134/626 (21%)
Query: 60 GDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICF 119
GDIV+ E GD+ P D ++ V +S++TGES I+E D ++
Sbjct: 127 GDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPV-----IKE----SGGDFASVT- 175
Query: 120 MGTNVVSGSGTGLVVSTGSKTYTSTMFSTI---GKQKPPDDFEKGVRRISFVLICVMLIV 176
GT ++S + +T+ M + + ++K P+ E + + L V L+V
Sbjct: 176 GGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPN--EIALTILLIALTLVFLLV 233
Query: 177 ATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLG 236
+ + +S ++L + V L P +++ G + + S
Sbjct: 234 TATLWPFAAYGGNAISVTVLVALLVC--LIPTTIGGLLSAIGIAGMDRVLGFNVIATSGR 291
Query: 237 AIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDD 296
A+ G +D L +DKTGT+T+ + + + G ++ + A L S P
Sbjct: 292 AVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLASLA---DDTPEGK 348
Query: 297 AILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGA 356
+I+ G R + + F R + L+ +GR +I KGA
Sbjct: 349 SIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD------------NGR-MIRKGA 395
Query: 357 LEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQS 416
++ + + VE G I + + ++ G P +
Sbjct: 396 VDAIKR---HVEAN-GGHIPTDLDQAVDQVARQGGT-----------------PLVVCED 434
Query: 417 NRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG 476
NR G+I D K K+ +L K G+K ++TGD+ A I E G
Sbjct: 435 NR----------IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484
Query: 477 IRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGI 536
+ + F +A TP K+ +++ Q+ GK +V GDG
Sbjct: 485 V----------------DDF---------IAEATPEDKIALIRQEQAEGK-LVAMTGDGT 518
Query: 537 NDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE--------RGRVT---- 584
ND+ AL A+VG++++SG AK+ A+++ L+ D L+ V RG +T
Sbjct: 519 NDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSI 578
Query: 585 --------------FGNTMKYIKMSIIANL----GGVLSLLI------------ATMFLQ 614
F ++ I L +LS LI A +
Sbjct: 579 ANDVAKYFAIIPAIFAAAYPQLQALNIMCLHSPDSAILSALIFNALIIPALIPLALKGVS 638
Query: 615 TDPLTPKQLLTQNFL-YSVGQIAIPW 639
PLT LL +N Y +G + +P+
Sbjct: 639 YRPLTASALLRRNLWIYGLGGLIVPF 664
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 4e-15
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 12/176 (6%)
Query: 617 PLTPKQLLTQNFLY-SVGQIAIPWDKMEGDYVKTPQIWSENGL---PMF--ILFNGPVCI 670
PLTP Q+L N + + +A+ ++ E D +K P + L + IL G +
Sbjct: 3 PLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLIA 62
Query: 671 LCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE--VASW 728
+ +FFL ++ ++ F +L Q R+ + + ++
Sbjct: 63 IV-TLLVFFLGLLGFGISESG--LAQTMAFNTLVLSQLFNALNARSLRRSLFKIGLFSNK 119
Query: 729 PVLSSTLVISAIGIAIPFT-AIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRI 783
+L + L+ + + I + + V G T L L + +L L + V +L K +
Sbjct: 120 LLLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRKLL 175
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 1e-14
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 29/191 (15%)
Query: 402 GVAVKRLLPQKSAQSNRNDGPI--ESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKL 459
V K L + +AQ+++ P+ D L+ DP + + AL RL K G + +
Sbjct: 612 QVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVM 671
Query: 460 LTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQ 519
LTGD+ + A I E GI V+A + P K ++
Sbjct: 672 LTGDNPTTANAIAKEAGID-------------------------EVIAGVLPDGKAEAIK 706
Query: 520 SLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579
LQS G V +GDGIND+ AL A+VGI++ G+ VA + A I L+ L + +
Sbjct: 707 RLQSQG-RQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALA 765
Query: 580 RGRVTFGNTMK 590
R T N MK
Sbjct: 766 ISRATLRN-MK 775
|
Length = 834 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 2e-14
Identities = 129/561 (22%), Positives = 214/561 (38%), Gaps = 121/561 (21%)
Query: 44 VQSELIVQVDQRDVVP------GDIVIFEPGDLFPGD---VRLLTSKHLVVSQSSLTGES 94
+ L+ ++VP GDIV+ E G++ P D + + S V +S++TGES
Sbjct: 104 TIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVAS----VDESAITGES 159
Query: 95 WTAEKTADIRE---DHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTI-- 149
IRE D + GT V+S + + +T+ M + +
Sbjct: 160 -----APVIRESGGDFSS--------VTGGTRVLSDWLKIRITANPGETFLDRMIALVEG 206
Query: 150 -GKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQ 208
+QK P++ + LI +L VAT+ Y S ++V AL
Sbjct: 207 AERQKTPNEIALTILLSGLTLI-FLLAVATLYPFAIYSGGGAAS------VTVLVALLVC 259
Query: 209 MFPLIVNTSL-AKGALAM---ARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVN 264
+ P + L A G M + + S A+ G +D L +DKTGT+T+
Sbjct: 260 LIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE 319
Query: 265 HLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDE-IPFD 323
+ G +E + A L S D+ P +I+ G + + E +PF
Sbjct: 320 FIPVPGVSEEELADAAQLASLA--DET-PEGRSIVELAKKLGIELREDDLQSHAEFVPFT 376
Query: 324 FVRRKVSVILETESITEDRSS--QFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSE 381
+ R S G I KGA++ + + +V G I
Sbjct: 377 ---------------AQTRMSGVDLPGGREIRKGAVDAIRR---YVRER-GGHIPEDLDA 417
Query: 382 EQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKD 441
+ LG G + + + LG+I D K
Sbjct: 418 AVDEVSRLG-----------GTPL----------------VVVENGRILGVIYLKDIVKP 450
Query: 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVK 501
K+ L K G+K ++TGD+ A I E G+ + F
Sbjct: 451 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----------------DDF----- 489
Query: 502 RATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDL 561
+A TP KL +++ Q+ G+ +V GDG ND+ AL A+VG++++SG AK+
Sbjct: 490 ----IAEATPEDKLALIRQEQAEGR-LVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEA 544
Query: 562 ADIILLEKDLNVLVAGVERGR 582
A+++ L+ + L+ VE G+
Sbjct: 545 ANMVDLDSNPTKLIEVVEIGK 565
|
Length = 681 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 3e-13
Identities = 57/266 (21%), Positives = 101/266 (37%), Gaps = 41/266 (15%)
Query: 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSEL-IVQVDQRDVVPG 60
L L L+ +E +A+ LS + + RV+Q + +V ++ G
Sbjct: 25 LFLFLLG---ETLEERAKGRASDALSAL----LALAPSTARVLQGDGSEEEVPVEELQVG 77
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
DIVI PG+ P D ++ S V +S+LTGES EK
Sbjct: 78 DIVIVRPGERIPVDGVVI-SGESEVDESALTGESMPVEKKE------------------- 117
Query: 121 GTNVVSGS--GTGLVVSTGSKTYTSTMFSTIGK-------QKPPDDFEKGVRRISFVLIC 171
G V +G+ G G + +K + + I + K P ++ RI+ +
Sbjct: 118 GDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAP--IQRLADRIASYYVP 175
Query: 172 VMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCV 231
+L +A + ++ ++ ++V P L ++ AR +
Sbjct: 176 AVLAIALLTFVVWLALGA--LGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGIL 233
Query: 232 VKSLGAIRDMGTMDILCIDKTGTLTM 257
+K A+ + + + DKTGTLT
Sbjct: 234 IKGGDALEKLAKVKTVVFDKTGTLTT 259
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 4e-13
Identities = 55/176 (31%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 426 DMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTG 485
+ LGLI D + A+QA+ L G+K +LTGD+ A I E+GI
Sbjct: 556 NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI-------- 607
Query: 486 PDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAA 545
F A L P K++ V L + +GDGIND+ A+ AA
Sbjct: 608 ---------DFR---------AGLLPEDKVKAVTELNQ--HAPLAMVGDGINDAPAMKAA 647
Query: 546 NVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLG 601
++GI++ SG VA + AD L L L +E R T N I+ +I LG
Sbjct: 648 SIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHAN----IRQNITIALG 699
|
Length = 741 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 6e-13
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 24/249 (9%)
Query: 12 RFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLF 71
R+ + +A+ LS+ + A + I +V + PGDIV PG+
Sbjct: 68 RWLEMLAKGRASDALSKLAKL---QPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKI 124
Query: 72 PGDVRLLTSKHLVVSQSSLTGESW-TAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGT 130
P D + V +S +TGES +K D GT +GS
Sbjct: 125 PVDGTV-IEGESEVDESLVTGESLPVPKKVGDP--------------VIAGTVNGTGSLV 169
Query: 131 GLVVSTGSKTYTSTMFSTIGK---QKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFT 187
+TG T + + + + K P ++ +++ + V++ +A I +I
Sbjct: 170 VRATATGEDTTLAQIVRLVRQAQQSKAP--IQRLADKVAGYFVPVVIAIALITFVIWLIL 227
Query: 188 SKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMDIL 247
+ ++ ++V P L T +A A++ ++K A+ +D +
Sbjct: 228 GADFVFALEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTV 287
Query: 248 CIDKTGTLT 256
DKTGTLT
Sbjct: 288 VFDKTGTLT 296
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 2e-11
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 38/255 (14%)
Query: 15 QEYGSSKAAMKLSEFVR-CPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPG 73
+EY S +A L + P RV++ + +V ++ GD+V+ +PG+ P
Sbjct: 35 EEYASGRARRALKALMELAPDTA-----RVLRGGSLEEVAVEELKVGDVVVVKPGERVPV 89
Query: 74 DVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLV 133
D +L S V +S+LTGES EK F G ++ G +
Sbjct: 90 DGVVL-SGTSTVDESALTGESVPVEKAPGDE-------------VFAGA--INLDGVLTI 133
Query: 134 VSTGSKTYTSTMFSTI-------GKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYF 186
V T K + + I +K ++ + R + V+L +A I L+
Sbjct: 134 VVT--KLPADSTIAKIVNLVEEAQSRKAK--TQRFIDRFARYYTPVVLAIALAIWLVPGL 189
Query: 187 TSKNLSESILFGISVACALTPQMFPLIVNTSLAK-GALAM-ARDRCVVKSLGAIRDMGTM 244
K + + + +P L+++ A A++ AR ++K A+ + +
Sbjct: 190 L-KRWPFWVYRALVLLVVASP--CALVISAPAAYLSAISAAARHGILIKGGAALEALAKI 246
Query: 245 DILCIDKTGTLTMDR 259
+ DKTGTLT R
Sbjct: 247 KTVAFDKTGTLTTGR 261
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 1e-10
Identities = 58/275 (21%), Positives = 105/275 (38%), Gaps = 56/275 (20%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
++ L L+ R+ + +A + + + + A V +V +V G
Sbjct: 180 LIFLFLLG---RYLEARAKGRARRAIRALLD--LAPKT-ATVVRGDGEEEEVPVEEVQVG 233
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
DIV+ PG+ P D ++ S V +S LTGES EK
Sbjct: 234 DIVLVRPGERIPVDGVVV-SGSSSVDESMLTGESLPVEKKP------------------- 273
Query: 121 GTNVVSGS--GTGLVVSTGSKTYTSTMFSTIGK-------QKPPDDFEKGVRRIS--FVL 169
G V +G+ G + ++ T + I + K P ++ R++ FV
Sbjct: 274 GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAP--IQRLADRVASYFVP 331
Query: 170 ICVMLIVATIIILIDYFTSKNLSESILFGISV-----ACAL---TPQMFPLIVNTSLAKG 221
+ +++ T + + + ++ ++V CAL TP T++ G
Sbjct: 332 VVLVIAALTFALWPLFGGG-DWETALYRALAVLVIACPCALGLATP--------TAILVG 382
Query: 222 ALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLT 256
AR ++K A+ + +D + DKTGTLT
Sbjct: 383 IGRAARRGILIKGGEALERLAKVDTVVFDKTGTLT 417
|
Length = 713 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 5e-09
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 27/190 (14%)
Query: 428 VFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPD 487
LG+I D KD + L + G++ + TGD+ A I E G+
Sbjct: 431 EILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-------- 482
Query: 488 LELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV 547
+A P K+ V++ Q+ G H+V GDG ND+ AL ANV
Sbjct: 483 -----------------FVAECKPEDKINVIREEQAKG-HIVAMTGDGTNDAPALAEANV 524
Query: 548 GISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLL 607
G++++SG AK+ A++I L+ + L+ V G+ SI ++ ++L
Sbjct: 525 GLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAIL 584
Query: 608 IATMFLQTDP 617
A MF+ P
Sbjct: 585 PA-MFMAAMP 593
|
Length = 673 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 7e-09
Identities = 74/331 (22%), Positives = 122/331 (36%), Gaps = 78/331 (23%)
Query: 484 TGPDLELLSQESFHERVKR----ATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDS 539
+G +L Q E + R TV AR+ P QK +V+ LQ + + VG GDG ND
Sbjct: 757 SGKAFAVL-QAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLD-YTVGMCGDGANDC 814
Query: 540 LALDAANVGISV-DSGASVA-------KDLADI--ILLEKDLNVLVAGVERGRVTFGNTM 589
AL A+VGIS+ ++ ASVA ++ + ++ E GR +
Sbjct: 815 GALKQADVGISLSEAEASVAAPFTSKLASISCVPNVIRE------------GRCALVTSF 862
Query: 590 KYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQN-FLYSVGQIAIPWDKMEGDYVK 648
+ K + +L S+ I ++L L Q LT + L + + +K K
Sbjct: 863 QMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSK 920
Query: 649 TPQIWSENGLPMFILFNGPVCILCDVTALFFLWF------YYEAYNQM------------ 690
P LF+ IL V F L +E + Q
Sbjct: 921 ER--------PPSNLFSVY--ILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEK 970
Query: 691 --------NVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQEVAS-WPVLSSTLVISAIG 741
V+FF S Q LI ++ ++ PF + + P + + +
Sbjct: 971 ENFPNLLNTVLFFVS-------SFQYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLL 1023
Query: 742 IAI---PFTAIGDVMGFTELPLTYFGFLLLL 769
+ + P +G ++ LP + LL+
Sbjct: 1024 LVLLLDPHPLLGKILQIVPLPQEFRSKLLVW 1054
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 3e-07
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 297 AILAYVYTNGYRFQA--SKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITK 354
A+L + G + +++ ++ EIPF+ R+++S + + E R + K
Sbjct: 27 ALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYR--------LFVK 78
Query: 355 GALEEVIKVCSFV 367
GA E +++ CS +
Sbjct: 79 GAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 3e-06
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 26/153 (16%)
Query: 429 FLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDL 488
LG+I D K K+ L K G+K ++TGD+ A I E G+
Sbjct: 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----------- 484
Query: 489 ELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548
+ F LA TP KL +++ Q+ G+ +V GDG ND+ AL A+VG
Sbjct: 485 -----DDF---------LAEATPEDKLALIRQEQAEGR-LVAMTGDGTNDAPALAQADVG 529
Query: 549 ISVDSGASVAKDLADIILLEKDLNVLVAGVERG 581
++++SG AK+ +++ L+ + L+ VE G
Sbjct: 530 VAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIG 562
|
Length = 679 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 8e-05
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 426 DMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTG 485
D+V LGLI DP A++AL L + G+K +LTGD+ A I +G+ VS
Sbjct: 82 DLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSA- 140
Query: 486 PDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAA 545
+ + + P ++ L V V +GDG+ND A AA
Sbjct: 141 -------------DLYGLVGVGKPDPKIFELALEELG-VKPEEVLMVGDGVNDIPAAKAA 186
Query: 546 N 546
Sbjct: 187 G 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 2e-04
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 35 KVQRCAGRVVQSELIVQ----------VDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLV 84
K Q A R Q+E+ + +D D+ G IV G+ P D +++
Sbjct: 91 KAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-AT 149
Query: 85 VSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTST 144
V +S++TGES K + D N+ GT+V S + S ++
Sbjct: 150 VDESAITGESAPVIKESG---------GDFDNV-IGGTSVASDWLEVEITSEPGHSFLDK 199
Query: 145 MFSTI---GKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISV 201
M + ++K P++ + + +L+ TII L+ T L++ + F +S+
Sbjct: 200 MIGLVEGATRKKTPNE----------IALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSI 249
Query: 202 A--CALTPQMFPLIVNTSLAKGALAMARDRC-----VVKSLGAIRDMGTMDILCIDKTGT 254
A AL + P + L+ +A DR + KS ++ G +++L +DKTGT
Sbjct: 250 AMLIALAVCLIPTTIGGLLSAIGIA-GMDRVTQFNILAKSGRSVETCGDVNVLILDKTGT 308
Query: 255 LT 256
+T
Sbjct: 309 IT 310
|
Length = 673 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.002
Identities = 69/319 (21%), Positives = 121/319 (37%), Gaps = 95/319 (29%)
Query: 317 LDEIPFDFVRRKVSVILETESITEDRSSQFSGRFV-ITKGALEEVIKVCSFVEHMDSGPI 375
L+ + F+ R+++SVI+ GR + KGA + VI + + SG
Sbjct: 512 LNVLEFNSDRKRMSVIVRNPD----------GRIKLLCKGA-DTVI-----FKRLSSG-- 553
Query: 376 TSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQ------------KSAQSNRND--- 420
+ +EE K L E ++EGLR + +A + L + +A ++R +
Sbjct: 554 GNQVNEETKEHL---ENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLD 610
Query: 421 ---GPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKI------ 471
IE D++ LG D ++ + + L + G+K +LTGD + AI I
Sbjct: 611 VVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRL 670
Query: 472 ----------------------------CHEVGIRTTHVSTGPDLEL------------- 490
++ ++ L
Sbjct: 671 LSRNMEQIVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDE 730
Query: 491 -LSQESFHERVKRATVLA-RLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548
L +E +K V+ R++P+QK VV+ ++ +GDG ND + A+VG
Sbjct: 731 ELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG 790
Query: 549 ISVDSG-----ASVAKDLA 562
+ + SG A +A D A
Sbjct: 791 VGI-SGKEGMQAVMASDFA 808
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 792 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.93 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.9 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.82 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.64 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.37 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.35 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.34 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.33 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.32 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.29 | |
| PLN02887 | 580 | hydrolase family protein | 99.25 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.25 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.23 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.2 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.18 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.12 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.11 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.07 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.05 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.05 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.05 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.01 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.95 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.93 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.91 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.9 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.81 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.76 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.76 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.67 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.62 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.6 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.45 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.45 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.4 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.39 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.39 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.36 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.28 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.26 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.25 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.22 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.19 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.17 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.16 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.15 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.14 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.14 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.12 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.08 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.07 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.93 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.91 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.87 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.86 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.75 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.73 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.69 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.68 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.68 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.67 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.66 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.65 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.63 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.59 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.54 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.52 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.5 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.49 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.44 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.41 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.33 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.32 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.32 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.29 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.21 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.2 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.17 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.14 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.09 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.99 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.99 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.98 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.97 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.97 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.95 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.95 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.93 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.86 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.8 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.73 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.71 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.68 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.67 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.65 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.63 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.61 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.58 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.57 | |
| PLN02940 | 382 | riboflavin kinase | 96.57 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.35 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.32 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.31 | |
| PLN02811 | 220 | hydrolase | 96.27 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.23 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.19 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.18 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.09 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.02 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.02 | |
| PLN02423 | 245 | phosphomannomutase | 95.88 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.85 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.8 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.76 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 95.75 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.68 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.65 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.26 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.26 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.15 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 95.1 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 95.03 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.96 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 94.89 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.89 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 94.75 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 94.7 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 94.65 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 94.59 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 94.53 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 93.94 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 93.88 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 93.79 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 93.57 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 93.49 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.28 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 92.88 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 91.69 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 90.64 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 90.3 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 89.84 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 89.75 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 88.57 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 88.36 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 88.27 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 88.01 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 85.86 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 85.55 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 85.48 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 84.57 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 83.27 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 83.07 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 82.81 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 81.79 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-132 Score=1065.54 Aligned_cols=774 Identities=28% Similarity=0.427 Sum_probs=662.7
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|.+++++++++++||||+++|++++|+++.|+.+.|+| +|+.+.+++++|||||||.++-||+||||.++++.
T Consensus 84 I~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R-------~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 84 ITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLR-------SGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred eeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEe-------cCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 45778899999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCccccccccccc-CCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIRE-DHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDF 158 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~-~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~ 158 (792)
.++.||||+|||||.|+.|...... ++..+.-|++|++|+||.|..|.++|+|+.||.+|.+|++.+.++... +++|+
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 9999999999999999999776655 566777899999999999999999999999999999999999887654 46889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh--hccc--------ccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhc
Q 045750 159 EKGVRRISFVLICVMLIVATIIILI--DYFT--------SKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARD 228 (792)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~ 228 (792)
|+.++.+...+.-++.+.++..+++ .++. ...+.+.+..++++.++++|++||.+++++++.|.+||+|+
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakk 316 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKK 316 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhh
Confidence 9999999877764444444443333 2222 25677889999999999999999999999999999999999
Q ss_pred CCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCC--------------------------------CcH--
Q 045750 229 RCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGF--------------------------------PKE-- 274 (792)
Q Consensus 229 ~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~--------------------------------~~~-- 274 (792)
+.+||++.++|+||.+++||+|||||||+|+|.+.+++..++. ..+
T Consensus 317 naIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l 396 (972)
T KOG0202|consen 317 NAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLL 396 (972)
T ss_pred hhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHH
Confidence 9999999999999999999999999999999999998744321 111
Q ss_pred -HHHHHHH-hh-cccc--CC-----CCCchHHHHHHHHHhcCccccc--cc---------------ceEeEEeCCCCCCC
Q 045750 275 -NVLRFAF-LN-SYYK--TD-----QKYPLDDAILAYVYTNGYRFQA--SK---------------WKKLDEIPFDFVRR 327 (792)
Q Consensus 275 -~~l~~a~-~~-~~~~--~~-----~~~p~~~al~~~~~~~~~~~~~--~~---------------~~~~~~~~f~~~~k 327 (792)
+++..++ || +..+ .. .|.|.|.||..++.+.|..... .. ++...++||+++||
T Consensus 397 ~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK 476 (972)
T KOG0202|consen 397 QELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRK 476 (972)
T ss_pred HHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccc
Confidence 2223332 22 1222 12 5799999999999988776522 22 34459999999999
Q ss_pred eEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEe
Q 045750 328 KVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKR 407 (792)
Q Consensus 328 ~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~ 407 (792)
+|++.+.+...+. ++.+|+|||+|.++++|+++...+++...|+++..|+.+.+...+++++|+||+++|+++
T Consensus 477 ~Msv~c~~~~~~~-------~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~ 549 (972)
T KOG0202|consen 477 SMSVKCSPAHGQS-------GYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKD 549 (972)
T ss_pred eEEEEEecCCCCc-------cceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccC
Confidence 9999998753222 689999999999999998886444457799999999999999999999999999999997
Q ss_pred cCCC----ccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC----
Q 045750 408 LLPQ----KSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---- 479 (792)
Q Consensus 408 ~~~~----~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---- 479 (792)
.+.. ....+...+...|.||+|+|++++.||||++++++|+.|+++||+|.|+|||+..||.+||+++|+..
T Consensus 550 ~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed 629 (972)
T KOG0202|consen 550 SPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED 629 (972)
T ss_pred CcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc
Confidence 6631 22233445678899999999999999999999999999999999999999999999999999999943
Q ss_pred --CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcH
Q 045750 480 --THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGAS 556 (792)
Q Consensus 480 --~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~ 556 (792)
...++|++++++++++.++...++.+|+|++|++|.+||+.||++| +.|+|+|||+||+|+||.||+||||| +|++
T Consensus 630 ~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~g-eivAMTGDGVNDApALK~AdIGIAMG~~GTd 708 (972)
T KOG0202|consen 630 VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRG-EVVAMTGDGVNDAPALKKADIGIAMGISGTD 708 (972)
T ss_pred ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcC-CEEEecCCCccchhhhhhcccceeecCCccH
Confidence 3679999999999999999999999999999999999999999999 99999999999999999999999999 9999
Q ss_pred HHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhh
Q 045750 557 VAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQI 635 (792)
Q Consensus 557 ~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~ 635 (792)
++|++||+|+.||||+.|+.++++||.+|.|+++++.|.++.|+.++.+.+++..+..+.|++|.|+||+|+++| +|+.
T Consensus 709 VaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~ 788 (972)
T KOG0202|consen 709 VAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPAT 788 (972)
T ss_pred hhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred hcccCCCCccccCCCCCCCCCCcc-hhhhhhhhHHHHHH-H-HHHHHHHHHhhhcccchH--------------------
Q 045750 636 AIPWDKMEGDYVKTPQIWSENGLP-MFILFNGPVCILCD-V-TALFFLWFYYEAYNQMNV-------------------- 692 (792)
Q Consensus 636 ~~~~~~~~~~~m~~p~~~~~~~l~-~~~~~~g~~~a~~~-~-~~~~~~~~~~~~~~~~~~-------------------- 692 (792)
+|+.+|+++|+|++|||.....++ ...++..+..+++. + ....|.||+...+...+.
T Consensus 789 aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~ 868 (972)
T KOG0202|consen 789 ALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAV 868 (972)
T ss_pred hcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhh
Confidence 999999999999999987654433 33333333222211 1 122233443322111110
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhcCCccccc--ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHH
Q 045750 693 ---VFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQ--EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFL 766 (792)
Q Consensus 693 ---~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~--~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~ 766 (792)
....|++|.++++..+++.++++++..+.|. +|.|.++.+++.+.+..+++++|+| ++..|+++++++..|+++
T Consensus 869 F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~v 948 (972)
T KOG0202|consen 869 FEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLV 948 (972)
T ss_pred hcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHH
Confidence 0112667788999999999999998888766 4899999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 045750 767 LLLFIGYFTVGQLVKRIYILIYK 789 (792)
Q Consensus 767 l~~~~~~l~~~e~iK~~~~~~~~ 789 (792)
+.+.+.+++++|++|++.|++.+
T Consensus 949 l~~s~~V~i~dEilK~~~R~~~~ 971 (972)
T KOG0202|consen 949 LAISSPVIIVDEILKFIARNYFK 971 (972)
T ss_pred HHHhhhhhhHHHHHHHHHHhccC
Confidence 99999999999999999887754
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-126 Score=1119.55 Aligned_cols=769 Identities=42% Similarity=0.709 Sum_probs=671.2
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++.+++++||+|+++++++|+++.+++++|+|++.. -.+|++++|+++||||||+|.+++||+|||||++++|+
T Consensus 129 ~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~-~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~ 207 (902)
T PRK10517 129 ALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVIND-KGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQAR 207 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCcc-CCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcC
Confidence 35678899999999999999999999999999999993110 00178999999999999999999999999999999998
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEK 160 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~ 160 (792)
++.||||+|||||.|+.|.+++..+...+..|++|++|+||.+.+|++.++|++||.+|++|++.+.+++. ++++++++
T Consensus 208 ~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~ 287 (902)
T PRK10517 208 DLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQ 287 (902)
T ss_pred ceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHH
Confidence 89999999999999999999876555667789999999999999999999999999999999999988764 45788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.+++++++++.++++++.+.++++++...+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|+++++|+
T Consensus 288 ~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~ 367 (902)
T PRK10517 288 GISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQN 367 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhh
Confidence 99999998888888877777776666667889999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEe
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEI 320 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~ 320 (792)
||++|++|||||||||+|+|.+.++....+.+.++++..+.+++..+...+||+|.|+++++...+.......++.++++
T Consensus 368 lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~ 447 (902)
T PRK10517 368 FGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEI 447 (902)
T ss_pred ccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEe
Confidence 99999999999999999999999986655556678888888777666678999999999998654422234568889999
Q ss_pred CCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCee
Q 045750 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRV 400 (792)
Q Consensus 321 ~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rv 400 (792)
||++++|+|+++++.. ++ .+.+++||+||.++++|+.. ..+|...+++++.++++.+..++++.+|+|+
T Consensus 448 pFds~~k~msvvv~~~--~~-------~~~~~~KGa~e~il~~c~~~--~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 448 PFDFERRRMSVVVAEN--TE-------HHQLICKGALEEILNVCSQV--RHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred eeCCCcceEEEEEEEC--CC-------eEEEEEeCchHHHHHhchhh--hcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 9999999999988753 22 57899999999999999977 4567778899999999999999999999999
Q ss_pred EEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 401 IGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 401 l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
+++||++++.++.. .....|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.+|.++|+++||..+
T Consensus 517 lavA~k~~~~~~~~----~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~ 592 (902)
T PRK10517 517 VAVATKYLPAREGD----YQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG 592 (902)
T ss_pred EEEEEecCCccccc----cccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc
Confidence 99999987543211 11124789999999999999999999999999999999999999999999999999999888
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD 560 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~ 560 (792)
.+++|.+++.++++++.+.+.+..+|+|++|+||.++|+.+|++| ++|+|+|||.||+|||++||||||||+|+|.+|+
T Consensus 593 ~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G-~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREG-HVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCC-CEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhhhhhhcccC
Q 045750 561 LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWD 640 (792)
Q Consensus 561 ~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (792)
+||+|+++||+..|++++++||++|.|++|++.|.++.|+..+++.+++.++..+.|++|.|++|+|+++|++++++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 99999999999999999999999999999999999999999999998888877778999999999999999999999999
Q ss_pred CCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 045750 641 KMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIP 720 (792)
Q Consensus 641 ~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~ 720 (792)
++++++|++||+|+.+.+.+.+.+.|+.++++.+.+|+++++.++.........+++.+|.+++++|+++.+++|+++.+
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~ 831 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRIP 831 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence 99999999999998888889899999998888888887776654321111112466778999999999999999998877
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhcc---ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 045750 721 FIQEVASWPVLSSTLVISAIGIAIPFTA---IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILIYKKW 791 (792)
Q Consensus 721 ~~~~~~n~~l~~~~~~~~~l~~~~~~~p---l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~~~~~ 791 (792)
+|+.+ +++.+++..++++++..|+| ++.+|++.++|+.++.|++.+.+.+.++.|+.|.++.|+|+ |
T Consensus 832 ~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~K~~~~~~~~-~ 901 (902)
T PRK10517 832 FIQSR---AAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYG-W 901 (902)
T ss_pred cccch---HHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-C
Confidence 65544 44444444444444555544 89999999999544444444444444789999999999998 8
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-125 Score=1115.25 Aligned_cols=773 Identities=43% Similarity=0.732 Sum_probs=674.4
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++.+++++||++++++.++|+++.+++++|+|++.. -.+|++++|+++||||||+|.+++||+|||||++++|+
T Consensus 118 ~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~-~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~ 196 (903)
T PRK15122 118 LTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHA-GAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESR 196 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCcc-CCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcC
Confidence 35667899999999999999999999999999999993210 00268999999999999999999999999999999999
Q ss_pred CeEEEeccccCCCcccccccc----------cccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC
Q 045750 82 HLVVSQSSLTGESWTAEKTAD----------IREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK 151 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~----------~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~ 151 (792)
++.||||+|||||.|+.|.+. ...+...+..|++|++|+||.+.+|+++++|++||.+|++|++.+.+..
T Consensus 197 ~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~ 276 (903)
T PRK15122 197 DLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG 276 (903)
T ss_pred ceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcC
Confidence 889999999999999999862 1122345667889999999999999999999999999999999998877
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCc
Q 045750 152 QKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCV 231 (792)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~ 231 (792)
++.++++++.++++...+..++++++.+.+++......+|.+++.+++++++++|||+||++++++++.++.+|+|+|++
T Consensus 277 ~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~il 356 (903)
T PRK15122 277 TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVV 356 (903)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCe
Confidence 66667899999999888777776666666666555567889999999999999999999999999999999999999999
Q ss_pred cccchhhhcccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCccccc
Q 045750 232 VKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQA 311 (792)
Q Consensus 232 vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~ 311 (792)
+|++.++|+||++|++|||||||||+|+|.+.++++..+.+.++++.++.+++..+...+||+|.|+++++.+.+.....
T Consensus 357 Vk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~ 436 (903)
T PRK15122 357 VKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKP 436 (903)
T ss_pred ecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhh
Confidence 99999999999999999999999999999999998766666677888877665445567899999999999876654334
Q ss_pred ccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHH
Q 045750 312 SKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGE 391 (792)
Q Consensus 312 ~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (792)
..++.++++||++.+|+|+++++.. ++ +++.++||+||.++++|++. ..+|...+++++.++++.+..+
T Consensus 437 ~~~~~~~~~pF~s~~k~ms~v~~~~--~~-------~~~~~~KGa~e~il~~c~~~--~~~~~~~~l~~~~~~~i~~~~~ 505 (903)
T PRK15122 437 AGYRKVDELPFDFVRRRLSVVVEDA--QG-------QHLLICKGAVEEMLAVATHV--RDGDTVRPLDEARRERLLALAE 505 (903)
T ss_pred hcCceEEEeeeCCCcCEEEEEEEcC--CC-------cEEEEECCcHHHHHHhchhh--hcCCCeecCCHHHHHHHHHHHH
Confidence 5688899999999999999998753 23 67899999999999999977 3567777899999999999999
Q ss_pred HHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 045750 392 ELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKI 471 (792)
Q Consensus 392 ~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~i 471 (792)
+++.+|+|++++||++++.++... ...+..|+|++|+|+++++||+||+++++|++||++||+++|+|||++.+|.++
T Consensus 506 ~~a~~G~rvlavA~k~~~~~~~~~--~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aI 583 (903)
T PRK15122 506 AYNADGFRVLLVATREIPGGESRA--QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKI 583 (903)
T ss_pred HHHhCCCEEEEEEEeccCcccccc--ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 999999999999999875432111 122346789999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 472 CHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 472 a~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
|+++||..+.+++|.+++.++++++.+...+..+|+|++|+||.++|+.+|++| ++|+|+|||.||+|||++|||||||
T Consensus 584 A~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G-~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 584 CREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANG-HTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred HHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCC-CEEEEECCCchhHHHHHhCCEEEEe
Confidence 999999878899999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred cCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh
Q 045750 552 DSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS 631 (792)
Q Consensus 552 ~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 631 (792)
|+|+|.+|++||+|+++|||..|++++++||++|.|++|++.|.++.|+..+++.+++.++..+.|++|.|++|+|+++|
T Consensus 663 g~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D 742 (903)
T PRK15122 663 DSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYD 742 (903)
T ss_pred CcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988888887777778999999999999999
Q ss_pred hhhhhcccCCCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHH
Q 045750 632 VGQIAIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLII 711 (792)
Q Consensus 632 ~~~~~~~~~~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~ 711 (792)
++++++++|++++++|++|++|+.+.+.+.+++.|+..+++.+.+|+++++.+..........++|.+|.+++++|+++.
T Consensus 743 ~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~q~~~~ 822 (903)
T PRK15122 743 ISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFVFAANSVEMQALFQSGWFIEGLLSQTLVV 822 (903)
T ss_pred HHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999995566677787888888888888888777776655543211100012357889999999999999
Q ss_pred HHHhcCCcccccccchHHHHHHHHHHHHHHHHhhhcc---ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045750 712 HLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTA---IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILIY 788 (792)
Q Consensus 712 ~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p---l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~~ 788 (792)
+++|+++.++|+. ++++.++++.+++++++.|+| ++.+|++.|+|+.+|++++.+++.++++.|+.|++++|++
T Consensus 823 ~~~R~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 823 HMLRTQKIPFIQS---TAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HhhCcCCCCcCcc---hHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999988776653 344444555556666666666 7899999999999999999999999999999999999999
Q ss_pred ccCC
Q 045750 789 KKWL 792 (792)
Q Consensus 789 ~~~~ 792 (792)
++||
T Consensus 900 ~~~~ 903 (903)
T PRK15122 900 GQWF 903 (903)
T ss_pred cccC
Confidence 9997
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-124 Score=1104.16 Aligned_cols=771 Identities=40% Similarity=0.708 Sum_probs=678.2
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
++++++++.+++++||+|++|+.++++++.+++++|+|.... -+||++++|+++||||||+|.+++||+|||||++++|
T Consensus 94 I~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~-~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g 172 (867)
T TIGR01524 94 IALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINE-NGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISA 172 (867)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEeccc-CCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEec
Confidence 356788999999999999999999999999999999992100 0058999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCCCChHHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEK 160 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~ 160 (792)
+++.||||+|||||.|+.|.+++....+.+..+++|++|+||.+.+|+++++|++||.+|.+|++.+.+.+++.++++++
T Consensus 173 ~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~t~lq~ 252 (867)
T TIGR01524 173 RDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDK 252 (867)
T ss_pred CceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCCCCcHHH
Confidence 88999999999999999999987655667788999999999999999999999999999999999998877666788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.+++++.+++.++++++.+.++++.+...+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|+++++|+
T Consensus 253 ~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~ 332 (867)
T TIGR01524 253 GVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQN 332 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhh
Confidence 99999998888888877777766655567888999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEe
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEI 320 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~ 320 (792)
||++|++|||||||||+|+|++.++.+..+.+.++++..+++++..+...+||+|.|+++++...........++..+++
T Consensus 333 lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~ 412 (867)
T TIGR01524 333 FGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEI 412 (867)
T ss_pred ccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEe
Confidence 99999999999999999999999997666666777888887776666667899999999998754333334577889999
Q ss_pred CCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCee
Q 045750 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRV 400 (792)
Q Consensus 321 ~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rv 400 (792)
||++++|+|+++++.+ ++ .++.++||+||.++++|+.+ ..+|...+++++.++++.+..++++.+|+|+
T Consensus 413 pF~s~~k~ms~~v~~~--~~-------~~~~~~KGa~e~il~~c~~~--~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 413 PFDFDRRRLSVVVENR--AE-------VTRLICKGAVEEMLTVCTHK--RFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred ccCCCcCEEEEEEEcC--Cc-------eEEEEEeCcHHHHHHhchhh--hcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 9999999999998753 22 46889999999999999977 4677778899998999999999999999999
Q ss_pred EEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 401 IGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 401 l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
+++||++++.++.. ..++.|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.+|.++|+++||..+
T Consensus 482 lavA~~~~~~~~~~----~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEAD----FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN 557 (867)
T ss_pred EEEEEeccCccccc----ccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence 99999987643221 11224789999999999999999999999999999999999999999999999999999888
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD 560 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~ 560 (792)
.+++|.+++.++++++.+...+..+|+|++|+||.++|+.+|++| ++|+|+|||.||+|||++||||||||+|++.+|+
T Consensus 558 ~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G-~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAG-HTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCC-CEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhhhhhhcccC
Q 045750 561 LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWD 640 (792)
Q Consensus 561 ~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (792)
+||+|+++|||..|++++++||++|.|+++++.|.++.|+..+++.+++.++..+.|++|.|++|+|+++|++++++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999888888877778999999999999999999999999
Q ss_pred CCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 045750 641 KMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIP 720 (792)
Q Consensus 641 ~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~ 720 (792)
++++++|++||+|+.+.+.+.+++.|+..+++.+.+|+++++.+..........++|.+|.+++++|+++.+++|+++.+
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~ 796 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEKIP 796 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCCCC
Confidence 99999999999998888888899999988887777776655443211111133468899999999999999999998766
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhcc-c--cccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 045750 721 FIQEVASWPVLSSTLVISAIGIAIPFTA-I--GDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILIYKKW 791 (792)
Q Consensus 721 ~~~~~~n~~l~~~~~~~~~l~~~~~~~p-l--~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~~~~~ 791 (792)
+|+ |++++.++++.+++++++.|+| + +.+|++.|+|+.++.|++.+.+.+.++.|+.|+++.|+++.|
T Consensus 797 ~~~---n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~ 867 (867)
T TIGR01524 797 FIQ---SRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYMATMQLVKTFYIRRFGEW 867 (867)
T ss_pred cCc---chHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 654 6677777777777777888887 3 889999998766544444444445588999999999999988
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-122 Score=1100.60 Aligned_cols=770 Identities=25% Similarity=0.389 Sum_probs=654.4
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|+++++++++++++||++++|++++|+++.+++++|+| ||++++|+++||||||||.+++||+|||||+++++
T Consensus 87 Il~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViR-------dg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 87 ISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIR-------NGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEe-------CCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEe
Confidence 35678899999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCccccccccccc--CCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-----
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIRE--DHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK----- 153 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~--~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~----- 153 (792)
+++.||||+|||||.|+.|.+.... +.+.+..|+.|++|+||.|.+|++.++|++||.+|..|++.+.+...+
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~ 239 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccc
Confidence 9999999999999999999875332 234556788999999999999999999999999999999998774321
Q ss_pred -------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHH
Q 045750 154 -------------------------------PPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVA 202 (792)
Q Consensus 154 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 202 (792)
.++++++.++++..++..++++++++++++..+ ..+.+.+.++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--~~~~~~~~~av~l~ 317 (1053)
T TIGR01523 240 PEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--DVDKEVAIYAICLA 317 (1053)
T ss_pred ccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHH
Confidence 137899999999998888777777766655432 22357778889999
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCC-----------CC
Q 045750 203 CALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSW-----------GF 271 (792)
Q Consensus 203 ~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~-----------~~ 271 (792)
++++|++||++++++++.++.+|+|++++||++.++|+||++++||+|||||||+|+|++.+++... ++
T Consensus 318 Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~ 397 (1053)
T TIGR01523 318 ISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAF 397 (1053)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875321 00
Q ss_pred -----------------------------------------Cc-------HHHHHHHHhhcc--cc--------CCCCCc
Q 045750 272 -----------------------------------------PK-------ENVLRFAFLNSY--YK--------TDQKYP 293 (792)
Q Consensus 272 -----------------------------------------~~-------~~~l~~a~~~~~--~~--------~~~~~p 293 (792)
.. .+++..+.+++. .. ...+||
T Consensus 398 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~Gdp 477 (1053)
T TIGR01523 398 NPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDP 477 (1053)
T ss_pred CCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCc
Confidence 00 124444443322 11 124799
Q ss_pred hHHHHHHHHHhcCccc---------------------------ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCC
Q 045750 294 LDDAILAYVYTNGYRF---------------------------QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQF 346 (792)
Q Consensus 294 ~~~al~~~~~~~~~~~---------------------------~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~ 346 (792)
+|.|+++++.+.|.+. ....|+.++++||+|+||||+++++.+. ++
T Consensus 478 tE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~-~~------ 550 (1053)
T TIGR01523 478 TEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNH-GE------ 550 (1053)
T ss_pred cHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCC-CC------
Confidence 9999999998777531 0235788999999999999999998541 11
Q ss_pred CceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccC-----CCCCC
Q 045750 347 SGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQS-----NRNDG 421 (792)
Q Consensus 347 ~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~-----~~~~~ 421 (792)
.+++++|||||.|+++|+.....+++...+++++.++++.+..++++++|+||+++|||.+++++.... ...++
T Consensus 551 -~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~ 629 (1053)
T TIGR01523 551 -TYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRA 629 (1053)
T ss_pred -EEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchh
Confidence 478999999999999998763222225678999999999999999999999999999999865322110 11234
Q ss_pred CCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC------------Cccccchhhh
Q 045750 422 PIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT------------THVSTGPDLE 489 (792)
Q Consensus 422 ~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~------------~~~~~g~~~~ 489 (792)
.+|+|++|+|+++++||+||+++++|++||++||+++|+|||++.+|.++|+++||.. ..+++|.+++
T Consensus 630 ~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~ 709 (1053)
T TIGR01523 630 TAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD 709 (1053)
T ss_pred hhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh
Confidence 5789999999999999999999999999999999999999999999999999999953 3689999999
Q ss_pred ccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEecc
Q 045750 490 LLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLE 568 (792)
Q Consensus 490 ~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~ 568 (792)
.++++++++...+..||||++|+||.++|+.+|+.| ++|+|+|||.||+|||++|||||||| +|++.++++||+++.+
T Consensus 710 ~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g-~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~d 788 (1053)
T TIGR01523 710 ALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRK-AFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSD 788 (1053)
T ss_pred hcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcC-CeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEec
Confidence 999999999999999999999999999999999999 99999999999999999999999999 8999999999999999
Q ss_pred CCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCchHHHHHHHHHHhh-hhhhhcccCCC
Q 045750 569 KDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFL-----QTDPLTPKQLLTQNFLYS-VGQIAIPWDKM 642 (792)
Q Consensus 569 ~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~ 642 (792)
++|..|.+++++||++|.|+++++.|.++.|+..+++.+++.++. .+.||+|+|++|+|+++| +|++++++|++
T Consensus 789 d~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~ 868 (1053)
T TIGR01523 789 DNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKA 868 (1053)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 999999999999999999999999999999999998888877763 247899999999999999 89999999999
Q ss_pred CccccCCCCCCCCCCcch-----hhhhhhhHHHHHHHHHHHHHHHHhhhc---cc---------chHHHHHHHHHHHHHH
Q 045750 643 EGDYVKTPQIWSENGLPM-----FILFNGPVCILCDVTALFFLWFYYEAY---NQ---------MNVVFFRSAWFVEGLL 705 (792)
Q Consensus 643 ~~~~m~~p~~~~~~~l~~-----~~~~~g~~~a~~~~~~~~~~~~~~~~~---~~---------~~~~~~~t~~f~~lv~ 705 (792)
++++|++||+++...++. .+.+.|++.++.++++|++.++.+... .. .+...++|++|.++++
T Consensus 869 ~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~ 948 (1053)
T TIGR01523 869 APDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTF 948 (1053)
T ss_pred ChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHH
Confidence 999999999876544433 455667777766666665443322100 00 1245689999999999
Q ss_pred HHHHHHHHHhcCCccccc-----------------ccchHHHHHHHHHHHHHHHHhhhcc-ccc-cccccccChhHHHHH
Q 045750 706 MQTLIIHLIRTEKIPFIQ-----------------EVASWPVLSSTLVISAIGIAIPFTA-IGD-VMGFTELPLTYFGFL 766 (792)
Q Consensus 706 ~q~~~~~~~r~~~~~~~~-----------------~~~n~~l~~~~~~~~~l~~~~~~~p-l~~-~f~~~~l~~~~w~~~ 766 (792)
+|+++.+++|+++.++|+ .+.|+++++++++.++++++++|+| ++. +|++.|+++ .|+++
T Consensus 949 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~ 1027 (1053)
T TIGR01523 949 CALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLA 1027 (1053)
T ss_pred HHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHH
Confidence 999999999998877653 2578999999999999999999999 986 999999997 68888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 045750 767 LLLFIGYFTVGQLVKRIYILIYK 789 (792)
Q Consensus 767 l~~~~~~l~~~e~iK~~~~~~~~ 789 (792)
++++++.+++.|+.|++.||+.+
T Consensus 1028 ~~~~~~~~~~~e~~K~~~r~~~~ 1050 (1053)
T TIGR01523 1028 AAATIAFFFGAEIWKCGKRRLFK 1050 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 88999999999999988776654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-121 Score=1080.11 Aligned_cols=747 Identities=33% Similarity=0.507 Sum_probs=655.9
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++++++++||+++++++++++++.+++++|+| ||++++|+++||||||||.+++||+||||+++++++
T Consensus 110 ~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R-------~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~ 182 (917)
T COG0474 110 LLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLR-------DGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESS 182 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEe-------CCcEEEecHHHCCCCcEEEECCCCccccceEEEEec
Confidence 3467889999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCC-cccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLL-DLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFE 159 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~-~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~ 159 (792)
+++||||+|||||.|+.|.+......+.+.- |+.|++|+||.+.+|++.|+|++||.+|+.|++...+... ...++++
T Consensus 183 ~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~ 262 (917)
T COG0474 183 DLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQ 262 (917)
T ss_pred CceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHH
Confidence 9999999999999999999876655555565 8999999999999999999999999999999999999887 6788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccc-hhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYFTSKN-LSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~ 238 (792)
+.++++..+++.++++++++.+++..+.+.. |.+++.++++++++++|++||+.++++++.++.+|+|+++++|+++++
T Consensus 263 ~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~av 342 (917)
T COG0474 263 RKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAI 342 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchh
Confidence 9999999999999999998888888776455 899999999999999999999999999999999999999999999999
Q ss_pred hcccceeEEEeccccccccCceEEEEeeCCC-CCCcH-----------HHHHHHHhhccccCC------CCCchHHHHHH
Q 045750 239 RDMGTMDILCIDKTGTLTMDRAIMVNHLDSW-GFPKE-----------NVLRFAFLNSYYKTD------QKYPLDDAILA 300 (792)
Q Consensus 239 e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~-~~~~~-----------~~l~~a~~~~~~~~~------~~~p~~~al~~ 300 (792)
|+||++|+||+|||||||+|+|++.+++..+ +.+.+ +++..+++++..... .+||+|.|+++
T Consensus 343 E~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~ 422 (917)
T COG0474 343 ETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVE 422 (917)
T ss_pred hhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHH
Confidence 9999999999999999999999999998874 22111 133333333333332 78999999999
Q ss_pred HHHhcCc--cc--ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcc
Q 045750 301 YVYTNGY--RF--QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPIT 376 (792)
Q Consensus 301 ~~~~~~~--~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~ 376 (792)
++.+.|. .. ....+++++++||+|+||||+++++.+ ++ ++++++|||||.|+++|+.. ++..
T Consensus 423 ~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~--~~-------~~~~~~KGApe~il~~~~~~-----~~~~ 488 (917)
T COG0474 423 FAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTD--EG-------KYILFVKGAPEVILERCKSI-----GELE 488 (917)
T ss_pred HHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcC--CC-------cEEEEEcCChHHHHHHhccc-----Cccc
Confidence 9988776 33 344567799999999999999999843 23 58999999999999999865 6677
Q ss_pred cCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCe
Q 045750 377 SFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVK 456 (792)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~ 456 (792)
+++++.++.+++..++++++|+||+++|||..+.++..... +++|+|++|+|+++++||||++++++|+.|+++||+
T Consensus 489 ~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~---~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~ 565 (917)
T COG0474 489 PLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEV---DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIK 565 (917)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchh---hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCc
Confidence 89999999999999999999999999999976544322221 779999999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCCCc----cccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEE
Q 045750 457 AKLLTGDSLSLAIKICHEVGIRTTH----VSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFL 532 (792)
Q Consensus 457 v~~~Tgd~~~~a~~ia~~~gi~~~~----~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~i 532 (792)
++|+|||+..||.++|+++|+..+. +++|.++..+.++++.+.+.+..||||++|+||.++|+.+|+.| ++|+|+
T Consensus 566 v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g-~vVamt 644 (917)
T COG0474 566 VWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSG-HVVAMT 644 (917)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCC-CEEEEe
Confidence 9999999999999999999996654 99999999999999999999999999999999999999999999 999999
Q ss_pred cCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 533 GDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATM 611 (792)
Q Consensus 533 GDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~ 611 (792)
|||.||+||||+|||||||+ +|+|++|++||+++.++++..+..+++|||++|.|+++++.|.++.|+..+++.+++.+
T Consensus 645 GDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~ 724 (917)
T COG0474 645 GDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSL 724 (917)
T ss_pred CCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 79999999999999999999999999999999999999999999999998888888877
Q ss_pred HhcC-CCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCCC------CcchhhhhhhhHHHHHHHHHHHHHHHH
Q 045750 612 FLQT-DPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSEN------GLPMFILFNGPVCILCDVTALFFLWFY 683 (792)
Q Consensus 612 ~~~~-~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~~------~l~~~~~~~g~~~a~~~~~~~~~~~~~ 683 (792)
+..+ .|+++.|++|+|++++ +|+++++.++++.+.|++||+.... .+++.+++.|+..+++.+++|.+.++.
T Consensus 725 ~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~ 804 (917)
T COG0474 725 FNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLG 804 (917)
T ss_pred HhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7666 8999999999999999 6899999999999999988654433 333445555666666666665555443
Q ss_pred hhhcc-cc--hHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--cchHHHHHHHHHHHHHHHHhhhcc-cc-cccccc
Q 045750 684 YEAYN-QM--NVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE--VASWPVLSSTLVISAIGIAIPFTA-IG-DVMGFT 756 (792)
Q Consensus 684 ~~~~~-~~--~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~~--~~n~~l~~~~~~~~~l~~~~~~~p-l~-~~f~~~ 756 (792)
..... +. .....+|++|..++++|.++.+.+|+.+.+++.. +.|+.+++++++...++++..|.| .. ..|...
T Consensus 805 ~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~ 884 (917)
T COG0474 805 FIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPT 884 (917)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCC
Confidence 32211 11 2567899999999999999999999998888886 489999999999999999999998 66 789999
Q ss_pred ccChhHHHHHHHHHHHH
Q 045750 757 ELPLTYFGFLLLLFIGY 773 (792)
Q Consensus 757 ~l~~~~w~~~l~~~~~~ 773 (792)
+++...|+..++.....
T Consensus 885 ~~~~~~~~~~~~~~~~~ 901 (917)
T COG0474 885 PLSLFEWLIAIAVALLL 901 (917)
T ss_pred CCcHHHHHHHHHHHHHH
Confidence 99977788777666333
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-120 Score=1080.82 Aligned_cols=772 Identities=26% Similarity=0.364 Sum_probs=661.6
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++++++++||+|+++++++++++.+++++|+| ||++++|+++||||||+|.+++||+|||||++++|+
T Consensus 111 ~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViR-------dg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~ 183 (997)
T TIGR01106 111 SAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIR-------DGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQ 183 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE-------CCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEcc
Confidence 3466788999999999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEK 160 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~ 160 (792)
++.||||+|||||.|+.|.+++. ....++.+|++|+||.+.+|++.++|++||.+|.+|++.+.+++. .+++++++
T Consensus 184 ~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~ 260 (997)
T TIGR01106 184 GCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAI 260 (997)
T ss_pred CcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcHHH
Confidence 88999999999999999988743 234558899999999999999999999999999999999877653 34578999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.++++...++.+++++++++++++...+.+|.+.+.+++++++++|||+||++++++++.++.+|+++|+++|+++++|+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~ 340 (997)
T TIGR01106 261 EIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVET 340 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHH
Confidence 99999988888777777776666655667888999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCC--------------CCc-----HHHHHHHHhhccc--c-----------C
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWG--------------FPK-----ENVLRFAFLNSYY--K-----------T 288 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--------------~~~-----~~~l~~a~~~~~~--~-----------~ 288 (792)
||++|++|||||||||+|+|++.+++..+. .+. +.++..+++++.. . .
T Consensus 341 lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~ 420 (997)
T TIGR01106 341 LGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRA 420 (997)
T ss_pred hcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccc
Confidence 999999999999999999999998863211 011 1344544443221 1 1
Q ss_pred CCCCchHHHHHHHHHhcCccc--ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhccc
Q 045750 289 DQKYPLDDAILAYVYTNGYRF--QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSF 366 (792)
Q Consensus 289 ~~~~p~~~al~~~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~ 366 (792)
..++|+|.|+++++...+... .+..++.++++||+|+||+|+++++.+..++ ..+++++||+||.++++|+.
T Consensus 421 ~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~------~~~~~~~KGApe~Il~~c~~ 494 (997)
T TIGR01106 421 VAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRD------PRHLLVMKGAPERILERCSS 494 (997)
T ss_pred cCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCC------ceEEEEEeCChHHHHHHhhH
Confidence 247999999999987544322 3457889999999999999998876421111 15789999999999999998
Q ss_pred ccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCcccc-CCCCC---CCCCCCcEEEEecccCCCCChh
Q 045750 367 VEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQ-SNRND---GPIESDMVFLGLITFYDPPKDS 442 (792)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~-~~~~~---~~~e~~l~~lG~i~~~d~~r~~ 442 (792)
+ ..+|...+++++.++.+.+..++++++|+||+++||+.+++++... +.... +..|+|++|+|+++++||+||+
T Consensus 495 ~--~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~ 572 (997)
T TIGR01106 495 I--LIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAA 572 (997)
T ss_pred H--hcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHH
Confidence 7 4678888999999999999999999999999999999886543221 11111 2348999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--------------------------CccccchhhhccCHHHH
Q 045750 443 AKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--------------------------THVSTGPDLELLSQESF 496 (792)
Q Consensus 443 ~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--------------------------~~~~~g~~~~~~~~~~~ 496 (792)
++++|++|+++|++++|+|||++.+|.++|+++|+.. ..+++|.+++.++++++
T Consensus 573 v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el 652 (997)
T TIGR01106 573 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQL 652 (997)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHH
Confidence 9999999999999999999999999999999999942 25899999999999999
Q ss_pred HHhhhcc--eEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchH
Q 045750 497 HERVKRA--TVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNV 573 (792)
Q Consensus 497 ~~~~~~~--~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~ 573 (792)
++.+.+. .||||++|+||.++|+.+|+.| ++|+|+|||.||+|||++|||||||| +|++.+|++||+++.+|+|+.
T Consensus 653 ~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g-~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 653 DEILKYHTEIVFARTSPQQKLIIVEGCQRQG-AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHhcCCEEEEECCHHHHHHHHHHHHHCC-CEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 9988765 4999999999999999999999 99999999999999999999999999 799999999999999999999
Q ss_pred HHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCC
Q 045750 574 LVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQI 652 (792)
Q Consensus 574 i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~ 652 (792)
|++++++||++|.|+++++.|.++.|+..+++.+++.++..|.|++|+|++|+|+++| +|++++++|++++++|++||+
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCc
Confidence 9999999999999999999999999999999999888888889999999999999999 689999999999999998887
Q ss_pred C-CCCCcc------hhhhhhhhHHHHHHHHHHHHHHHHhhh------------c----c----cc--h---------HHH
Q 045750 653 W-SENGLP------MFILFNGPVCILCDVTALFFLWFYYEA------------Y----N----QM--N---------VVF 694 (792)
Q Consensus 653 ~-~~~~l~------~~~~~~g~~~a~~~~~~~~~~~~~~~~------------~----~----~~--~---------~~~ 694 (792)
. +...+. ..+++.|+++++++++++++.+++.+. . + .. . ...
T Consensus 812 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (997)
T TIGR01106 812 NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFT 891 (997)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhh
Confidence 5 333333 234455777887777776655432110 0 0 00 0 015
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccc-ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHHH
Q 045750 695 FRSAWFVEGLLMQTLIIHLIRTEKIPFIQ-EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFIG 772 (792)
Q Consensus 695 ~~t~~f~~lv~~q~~~~~~~r~~~~~~~~-~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~~ 772 (792)
++|++|.+++++|+++.+++|+++.++|+ .+.|+.++.++++.++++++++|+| ++.+|++.|+++.+|+++++++++
T Consensus 892 ~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~ 971 (997)
T TIGR01106 892 CHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLL 971 (997)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHH
Confidence 79999999999999999999998888664 4789889888888899999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 045750 773 YFTVGQLVKRIYILIYKKWL 792 (792)
Q Consensus 773 ~l~~~e~iK~~~~~~~~~~~ 792 (792)
.+++.++.|++.+|+.+.||
T Consensus 972 ~~~~~~~~k~~~r~~~~~~~ 991 (997)
T TIGR01106 972 IFVYDEIRKLIIRRNPGGWV 991 (997)
T ss_pred HHHHHHHHHHHHHhCCcchh
Confidence 99999999988876657775
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-118 Score=1057.66 Aligned_cols=764 Identities=25% Similarity=0.387 Sum_probs=650.5
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++++++++||+++++++++++++.+++++|+| ||++++|+++||||||+|.+++||+|||||++++++
T Consensus 43 l~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViR-------dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~ 115 (917)
T TIGR01116 43 LLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLR-------DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLK 115 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE-------CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEec
Confidence 4678889999999999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEK 160 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~ 160 (792)
++.||||+|||||.|+.|.++...++..+..+++|++|+||.+.+|+++++|++||.+|+.|++.+.++.. .+++++++
T Consensus 116 ~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~ 195 (917)
T TIGR01116 116 TLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQK 195 (917)
T ss_pred ceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHH
Confidence 88999999999999999998755445556678889999999999999999999999999999999887654 45788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccc------ccch----hHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCC
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFT------SKNL----SESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRC 230 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i 230 (792)
.+++++..++.+.++++++.+++.... ..+| ...+..+++++++++|++||++++++++.++.+|+++|+
T Consensus 196 ~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~i 275 (917)
T TIGR01116 196 KLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNA 275 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCc
Confidence 999998877766666655554433211 1223 334556778899999999999999999999999999999
Q ss_pred ccccchhhhcccceeEEEeccccccccCceEEEEeeCCCC--------------CC-------------------cHHHH
Q 045750 231 VVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWG--------------FP-------------------KENVL 277 (792)
Q Consensus 231 ~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--------------~~-------------------~~~~l 277 (792)
++|+++++|+||++|++|||||||||+|+|++.+++..++ +. .+.++
T Consensus 276 lvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 355 (917)
T TIGR01116 276 IVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELA 355 (917)
T ss_pred EecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHH
Confidence 9999999999999999999999999999999999865321 00 11233
Q ss_pred HHHHhhccc--cC--------CCCCchHHHHHHHHHhcCcccc------------------cccceEeEEeCCCCCCCeE
Q 045750 278 RFAFLNSYY--KT--------DQKYPLDDAILAYVYTNGYRFQ------------------ASKWKKLDEIPFDFVRRKV 329 (792)
Q Consensus 278 ~~a~~~~~~--~~--------~~~~p~~~al~~~~~~~~~~~~------------------~~~~~~~~~~~f~~~~k~~ 329 (792)
..+.+++.. .. ..++|+|.|+++++.+.|.+.. ...++.++++||+|+||||
T Consensus 356 ~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~m 435 (917)
T TIGR01116 356 TIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSM 435 (917)
T ss_pred HHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeE
Confidence 334333321 11 1479999999999988775432 2457789999999999999
Q ss_pred EEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhh-ccCeeEEEEEEec
Q 045750 330 SVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSN-EGLRVIGVAVKRL 408 (792)
Q Consensus 330 ~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~rvl~~a~~~~ 408 (792)
+++++.+ + ++.+++||+||.|+++|+.+. .++|...+++++.++++.+..+++++ +|+||+++|||.+
T Consensus 436 sviv~~~---~-------~~~~~~KGApe~il~~c~~~~-~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~ 504 (917)
T TIGR01116 436 SVLCKPS---T-------GNKLFVKGAPEGVLERCTHIL-NGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDI 504 (917)
T ss_pred EEEEeeC---C-------cEEEEEcCChHHHHHhcccee-cCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEEC
Confidence 9999853 2 678999999999999999763 23477789999999999999999999 9999999999998
Q ss_pred CCCcccc---CCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC------
Q 045750 409 LPQKSAQ---SNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT------ 479 (792)
Q Consensus 409 ~~~~~~~---~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~------ 479 (792)
++++... .....+++|+|++|+|+++++||+||+++++|++||++|++++|+|||+..+|.++|+++|+..
T Consensus 505 ~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~ 584 (917)
T TIGR01116 505 PDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT 584 (917)
T ss_pred CccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc
Confidence 6532211 1122356799999999999999999999999999999999999999999999999999999954
Q ss_pred CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH
Q 045750 480 THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAK 559 (792)
Q Consensus 480 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~ 559 (792)
...++|.++..+++++..+...+..+|+|++|+||.++++.+|+.| ++|+|+|||.||+||+++||+||||++|++.+|
T Consensus 585 ~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g-~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak 663 (917)
T TIGR01116 585 FKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQG-EIVAMTGDGVNDAPALKKADIGIAMGSGTEVAK 663 (917)
T ss_pred ceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcC-CeEEEecCCcchHHHHHhCCeeEECCCCcHHHH
Confidence 2478999999999999988889999999999999999999999988 999999999999999999999999999999999
Q ss_pred hhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcc
Q 045750 560 DLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIP 638 (792)
Q Consensus 560 ~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~ 638 (792)
++||+++.+|+|..|.+++++||++|.|+++++.|.++.|+..+++.+++.++..+.|+++.|++|+|++++ +|+++++
T Consensus 664 ~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~ 743 (917)
T TIGR01116 664 EASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALG 743 (917)
T ss_pred HhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999888887777778999999999999999 8999999
Q ss_pred cCCCCccccCCCCCCCCCCcc-----hhhhhhhhHHHHHHHHHHHHHHHHhhhc-------------cc------chHHH
Q 045750 639 WDKMEGDYVKTPQIWSENGLP-----MFILFNGPVCILCDVTALFFLWFYYEAY-------------NQ------MNVVF 694 (792)
Q Consensus 639 ~~~~~~~~m~~p~~~~~~~l~-----~~~~~~g~~~a~~~~~~~~~~~~~~~~~-------------~~------~~~~~ 694 (792)
.+++++++|++||+++...++ ..+++.|+++++.+++.|.+.+...+.. ++ .....
T Consensus 744 ~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (917)
T TIGR01116 744 FNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQP 823 (917)
T ss_pred cCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccc
Confidence 999999999998876654333 3445566666655555444332211110 00 01346
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccc--ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHH
Q 045750 695 FRSAWFVEGLLMQTLIIHLIRTEKIPFIQ--EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFI 771 (792)
Q Consensus 695 ~~t~~f~~lv~~q~~~~~~~r~~~~~~~~--~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~ 771 (792)
++|++|.+++++|+++.+++|+++.++|+ .+.|+++++++++.+++++++.|+| ++.+|++.|+++.+|++++++++
T Consensus 824 ~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~ 903 (917)
T TIGR01116 824 ARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSL 903 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 78999999999999999999998888765 3678888888888899999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 045750 772 GYFTVGQLVKRIY 784 (792)
Q Consensus 772 ~~l~~~e~iK~~~ 784 (792)
..+++.|+.|++.
T Consensus 904 ~~~~~~e~~k~~~ 916 (917)
T TIGR01116 904 PVILVDEVLKFFS 916 (917)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-117 Score=1048.98 Aligned_cols=750 Identities=26% Similarity=0.410 Sum_probs=647.0
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
++++++++++++||+++++++++++++.+++++|+| ||++++|+++||||||+|.+++||+|||||++++|++
T Consensus 88 ~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViR-------dg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~ 160 (884)
T TIGR01522 88 LAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIR-------EGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD 160 (884)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE-------CCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc
Confidence 456778899999999999999999999999999999 9999999999999999999999999999999999988
Q ss_pred eEEEeccccCCCcccccccccccC-CCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIRED-HCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEK 160 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~-~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~ 160 (792)
+.||||+|||||.|+.|.+++... ...+..+++|++|+||.+.+|++.++|++||.+|..|++.+.+++.+ +++++++
T Consensus 161 l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~ 240 (884)
T TIGR01522 161 LSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQK 240 (884)
T ss_pred eEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHH
Confidence 899999999999999999875432 23456688899999999999999999999999999999998887643 4678999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.+++++.++..+.++++++.+++.++.+.+|.+++..++++++++|||+||++++++++.++.+|+|+|+++|+++++|+
T Consensus 241 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~ 320 (884)
T TIGR01522 241 SMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVET 320 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHh
Confidence 99999988776665555555555555567788999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCC----------------------------cHHHHHHHHh-hcc-cc---
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFP----------------------------KENVLRFAFL-NSY-YK--- 287 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~----------------------------~~~~l~~a~~-~~~-~~--- 287 (792)
||++|++|||||||||+|+|.+.+++..++.. .++++..+.+ +.. .+
T Consensus 321 Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 400 (884)
T TIGR01522 321 LGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA 400 (884)
T ss_pred ccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCC
Confidence 99999999999999999999999986543210 1234444433 222 21
Q ss_pred -CCCCCchHHHHHHHHHhcCcccccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhccc
Q 045750 288 -TDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSF 366 (792)
Q Consensus 288 -~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~ 366 (792)
+..+||+|.|+++++...|.......++.++++||+++||+|+++++... ++ +++.++||+||.++..|+.
T Consensus 401 ~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~-~~-------~~~~~~KGape~il~~c~~ 472 (884)
T TIGR01522 401 DTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQ-DR-------SEMCFMKGAYEQVLKYCTY 472 (884)
T ss_pred CCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcC-CC-------eEEEEEeCChHHHHHhhhh
Confidence 22468999999999988776544456889999999999999999987632 23 6789999999999999987
Q ss_pred ccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHH
Q 045750 367 VEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQA 446 (792)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~ 446 (792)
.. ..+|...+++++.++++.+..++++++|+|++++||+++ +.+++|+|+++++||+||+++++
T Consensus 473 ~~-~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~---------------~~~l~~lGli~l~Dp~r~~~~~~ 536 (884)
T TIGR01522 473 YQ-KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE---------------KGQLTFLGLVGINDPPRPGVKEA 536 (884)
T ss_pred hh-hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---------------CCCeEEEEEEeccCcchhHHHHH
Confidence 63 235667788899999999999999999999999999864 35789999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 447 LWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 447 I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
|++|+++|++++|+|||++.+|.++|+++|+.. ..+++|.+++.++++++++.+.+..+|+|++|+||.++++.+|+.
T Consensus 537 i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~ 616 (884)
T TIGR01522 537 VTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR 616 (884)
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999963 467899999999999999999999999999999999999999999
Q ss_pred CCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHH
Q 045750 525 GKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGV 603 (792)
Q Consensus 525 ~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~ 603 (792)
| ++|+|+|||.||+||+++|||||||| ++++.++++||+++++|++..|.+++++||++|.|+++++.|.++.|+..+
T Consensus 617 g-~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~ 695 (884)
T TIGR01522 617 G-DVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAAL 695 (884)
T ss_pred C-CEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 9 99999999999999999999999999 799999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCCC-CcchhhhhhhhHHHHHHHH-HHHHH
Q 045750 604 LSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSEN-GLPMFILFNGPVCILCDVT-ALFFL 680 (792)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~~-~l~~~~~~~g~~~a~~~~~-~~~~~ 680 (792)
++.+++.++..+.|++|+|++|+|+++| +|++++++|++++++|++||+++.. .+...++...++++++..+ +++.+
T Consensus 696 ~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 775 (884)
T TIGR01522 696 SLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVF 775 (884)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888889999999999999999 6789999999999999998876543 3333333333333333221 22222
Q ss_pred HHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccc
Q 045750 681 WFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQ--EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTE 757 (792)
Q Consensus 681 ~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~--~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~ 757 (792)
++.+ ..+.....++|++|.+++++|+++.+++|+++.++|+ .+.|+++++++++..+++++++|+| ++.+|++.|
T Consensus 776 ~~~~--~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~ 853 (884)
T TIGR01522 776 VREM--QDGVITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEA 853 (884)
T ss_pred HHHH--cCCcchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2211 1111234678999999999999999999998888775 3678888888888899999999999 999999999
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 758 LPLTYFGFLLLLFIGYFTVGQLVKRIYIL 786 (792)
Q Consensus 758 l~~~~w~~~l~~~~~~l~~~e~iK~~~~~ 786 (792)
+++.+|+++++++++.+++.|+.|++.|+
T Consensus 854 l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 854 LSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999987654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-115 Score=1038.08 Aligned_cols=744 Identities=23% Similarity=0.311 Sum_probs=623.5
Q ss_pred EEehHhHHHHHHHHhHHHHHHHHhcc-CCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 4 LVLISVCLRFYQEYGSSKAAMKLSEF-VRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
+++++.+++++||++++++.+++++. .+++++|+| ||++++|+++||||||+|.+++||+|||||++++|++
T Consensus 137 ~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViR-------dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~ 209 (941)
T TIGR01517 137 SVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIR-------GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS 209 (941)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEE-------CCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCc
Confidence 45667889999999999999999874 478999999 9999999999999999999999999999999999977
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCCCChHHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGV 162 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~ 162 (792)
+.||||+|||||.|+.|.+++. |++|+||.+.+|++.++|++||.+|+.|++.+.+.+.++++++++.+
T Consensus 210 l~VdES~LTGES~pv~K~~~~~-----------n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~ 278 (941)
T TIGR01517 210 LEIDESSITGESDPIKKGAPKD-----------SFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKL 278 (941)
T ss_pred EEEEecccCCCCCcccccCCCC-----------ceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHH
Confidence 8999999999999999988643 79999999999999999999999999999999887765667899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhc---cc----c---------cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHh
Q 045750 163 RRISFVLICVMLIVATIIILIDY---FT----S---------KNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMA 226 (792)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~---~~----~---------~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~ 226 (792)
+++...+..++++++++.++++. .. . .++.+.+..++++++++|||+||++++++++.++.+|+
T Consensus 279 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 279 SELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 99887776665555444433321 11 1 25677889999999999999999999999999999999
Q ss_pred hcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCC----------C--cHHHH-HHHHhhcccc------
Q 045750 227 RDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGF----------P--KENVL-RFAFLNSYYK------ 287 (792)
Q Consensus 227 ~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~----------~--~~~~l-~~a~~~~~~~------ 287 (792)
|+|+++|+++++|+||++|++|||||||||+|+|++.+++...+. + ..+++ ..+.+++...
T Consensus 359 k~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~ 438 (941)
T TIGR01517 359 KDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRG 438 (941)
T ss_pred hCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCC
Confidence 999999999999999999999999999999999999998654321 0 11222 3333433321
Q ss_pred ---CCCCCchHHHHHHHHHhcCccc--ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHH
Q 045750 288 ---TDQKYPLDDAILAYVYTNGYRF--QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIK 362 (792)
Q Consensus 288 ---~~~~~p~~~al~~~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~ 362 (792)
...+||+|.|+++++...|.+. .+..++.++.+||++++|+|+++++.+ ++ .+++++||+||.+++
T Consensus 439 ~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~--~~-------~~~~~~KGA~e~il~ 509 (941)
T TIGR01517 439 GKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHS--GG-------KVREFRKGASEIVLK 509 (941)
T ss_pred CccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeC--CC-------cEEEEEECChHHHHH
Confidence 2358999999999998766543 224567788999999999999999864 22 578999999999999
Q ss_pred hcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChh
Q 045750 363 VCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDS 442 (792)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~ 442 (792)
+|+... ..+|...++++ .++++.+..++++.+|+|++++||+.++.++.+ ..+..|+|++|+|+++++||+||+
T Consensus 510 ~c~~~~-~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~----~~~~~e~~l~~lGli~~~Dplr~~ 583 (941)
T TIGR01517 510 PCRKRL-DSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFP----RKDYPNGGLTLIGVVGIKDPLRPG 583 (941)
T ss_pred hhhHHh-hcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccc----cccccccCcEEEEEeeccCCCchh
Confidence 998752 23566667776 788899999999999999999999987643321 123357899999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHH
Q 045750 443 AKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQS 520 (792)
Q Consensus 443 ~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 520 (792)
++++|++||++||+++|+|||++.+|.++|+++||.. ..+++|+++..+.++++++.+.+..+|||++|+||.++|+.
T Consensus 584 ~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~ 663 (941)
T TIGR01517 584 VREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLM 663 (941)
T ss_pred HHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999999999963 57999999999999999999999999999999999999999
Q ss_pred HhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHH
Q 045750 521 LQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIAN 599 (792)
Q Consensus 521 l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~ 599 (792)
+|+.| ++|+|+|||.||+|||++|||||||| +|++.++++||+++++|+|..|++++++||++|.|+++++.|.+++|
T Consensus 664 lq~~g-~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n 742 (941)
T TIGR01517 664 LKDMG-EVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVN 742 (941)
T ss_pred HHHCC-CEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 89999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCC-CCcchh----hhhhhhHHHHHH
Q 045750 600 LGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSE-NGLPMF----ILFNGPVCILCD 673 (792)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~-~~l~~~----~~~~g~~~a~~~ 673 (792)
+..+++.+++.++..+.|++++|++|+|+++| +|++++++|+|++++|++||+++. +.+... +.+.|+++++..
T Consensus 743 ~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~ 822 (941)
T TIGR01517 743 VVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVT 822 (941)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 99988888888888889999999999999999 689999999999999998887654 333333 333444444433
Q ss_pred HHHHHHHHHHhhhcc-----cchHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccc-cchHHHHHHHHHHHHHHHHhhh
Q 045750 674 VTALFFLWFYYEAYN-----QMNVVFFRSAWFVEGLLMQTLIIHLIRTEKI-PFIQE-VASWPVLSSTLVISAIGIAIPF 746 (792)
Q Consensus 674 ~~~~~~~~~~~~~~~-----~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~-~~~~~-~~n~~l~~~~~~~~~l~~~~~~ 746 (792)
++.++.....+.... .......+|+.|.+++++|+++.+++|+.+. +++++ +.|++++.++.+.+++++ .+
T Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~--~~ 900 (941)
T TIGR01517 823 FILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQV--II 900 (941)
T ss_pred HHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHH--HH
Confidence 333322211111111 0123567899999999999999999998764 55554 567766666655555553 34
Q ss_pred cc-ccccccccccChhHHHHHHHHHHHHHHHHHHHHHH
Q 045750 747 TA-IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRI 783 (792)
Q Consensus 747 ~p-l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~ 783 (792)
+| ++.+|++.|+++..|+++++++++.+++.|++|.+
T Consensus 901 ~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 901 VEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45 89999999999999999999999999999999875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-117 Score=953.47 Aligned_cols=747 Identities=25% Similarity=0.350 Sum_probs=621.1
Q ss_pred hHhHHHHHHHHhHHHHHHHHhcc-CCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEE
Q 045750 7 ISVCLRFYQEYGSSKAAMKLSEF-VRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVV 85 (792)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~V 85 (792)
+..+...+.+|++++.+++|++. ...+..|+| +|+.++|+..||+||||+.++.||.+||||++++|.++.+
T Consensus 194 ~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR-------~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~i 266 (1034)
T KOG0204|consen 194 LVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIR-------GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKI 266 (1034)
T ss_pred EEEEEeecchhHHhhhhhhhhhhhhceEEEEEE-------CCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeE
Confidence 33344455566666666656543 235789999 9999999999999999999999999999999999999999
Q ss_pred EeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHHHHHH
Q 045750 86 SQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEKGVRR 164 (792)
Q Consensus 86 des~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~~~~~ 164 (792)
|||++||||+++.|.+.. +.++++||++.+|+++++|+.+|.+|..|+++..+.... ..+++|-++++
T Consensus 267 DESSlTGESd~v~k~~~~-----------dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~ 335 (1034)
T KOG0204|consen 267 DESSLTGESDHVQKSLDK-----------DPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNG 335 (1034)
T ss_pred ecccccCCCcceeccCCC-----------CCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHH
Confidence 999999999999998753 378999999999999999999999999999999988755 67889999999
Q ss_pred HHHHHHHHHHHHHHHhhh---hhcccc-----------------cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 045750 165 ISFVLICVMLIVATIIIL---IDYFTS-----------------KNLSESILFGISVACALTPQMFPLIVNTSLAKGALA 224 (792)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~---~~~~~~-----------------~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~ 224 (792)
++..+.-+.+.+|.+.++ +.++.+ ..+.+.+..++.++++++|++||+++++++++++++
T Consensus 336 lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kk 415 (1034)
T KOG0204|consen 336 LATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKK 415 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHH
Confidence 886655554444443332 222211 012334555667788999999999999999999999
Q ss_pred HhhcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCCC----------cHHHHHH----HHhhcc-----
Q 045750 225 MARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFP----------KENVLRF----AFLNSY----- 285 (792)
Q Consensus 225 ~~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~----------~~~~l~~----a~~~~~----- 285 (792)
|.+++.+||.++++|+||.+++||+|||||||+|+|.+++.+...... ++.+..+ .+.|+.
T Consensus 416 MmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~ 495 (1034)
T KOG0204|consen 416 MMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVK 495 (1034)
T ss_pred HhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEe
Confidence 999999999999999999999999999999999999999876433211 1122221 122221
Q ss_pred ------ccCCCCCchHHHHHHHHHhcCccc--ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCCh
Q 045750 286 ------YKTDQKYPLDDAILAYVYTNGYRF--QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGAL 357 (792)
Q Consensus 286 ------~~~~~~~p~~~al~~~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~ 357 (792)
-....++|.|.|++.+....|.++ .+.+.+..+.+||+|.||+|+++++.+. + +.+.++||+.
T Consensus 496 ~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~--~-------~~y~~~KGAs 566 (1034)
T KOG0204|consen 496 PEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPD--G-------GHYVHWKGAS 566 (1034)
T ss_pred cCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCC--C-------CeEEEEcChH
Confidence 123468999999999998887766 4677889999999999999999999752 2 3149999999
Q ss_pred HHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccc-cCCCCCCCCCCCcEEEEecccC
Q 045750 358 EEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSA-QSNRNDGPIESDMVFLGLITFY 436 (792)
Q Consensus 358 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~-~~~~~~~~~e~~l~~lG~i~~~ 436 (792)
|.+++.|+.+. ..+|+..+++++.++.+++.++.++.+|+|++|+||+++.+...+ ....+.+..+.+++++|+++++
T Consensus 567 EiVL~~C~~~~-~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIk 645 (1034)
T KOG0204|consen 567 EIVLKSCEYYI-DSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIK 645 (1034)
T ss_pred HHHHHhhhheE-CCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeecc
Confidence 99999999985 358899999999999999999999999999999999997655222 1122235678999999999999
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC----CCccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR----TTHVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~----~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
||.||+++++|+.|+++||+|.|+||||..||++||.+|||- +..++.|+++.++++++.++..++..|++|.+|.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 999999999999999999999999999999999999999992 2378999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHH
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKY 591 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 591 (792)
+|..+|+.++++| ++|+++|||.||.|+|++||||.||| .|+++||++||+|++||||.+|+++++|||+.|.|++|+
T Consensus 726 DK~lLVk~L~~~g-~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKF 804 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG-EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKF 804 (1034)
T ss_pred hHHHHHHHHHhcC-cEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHh
Confidence 9999999999999 99999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCC-CCCcchhhhhhhhHH
Q 045750 592 IKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWS-ENGLPMFILFNGPVC 669 (792)
Q Consensus 592 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~-~~~l~~~~~~~g~~~ 669 (792)
++|.++.|+..++..+++....+..||++.|+||+|+++| +.+++|++|||.+++|+|||.-+ ...+.+.||-..+.+
T Consensus 805 iQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~q 884 (1034)
T KOG0204|consen 805 LQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQ 884 (1034)
T ss_pred heeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHH
Confidence 9999999999888888888888889999999999999999 88999999999999999877654 455566676667778
Q ss_pred HHHHHHHHHHHHHHhhhc------ccchHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccc-cchHHHHHHHHHHHHHH
Q 045750 670 ILCDVTALFFLWFYYEAY------NQMNVVFFRSAWFVEGLLMQTLIIHLIRTEK-IPFIQE-VASWPVLSSTLVISAIG 741 (792)
Q Consensus 670 a~~~~~~~~~~~~~~~~~------~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~-~~~~~~-~~n~~l~~~~~~~~~l~ 741 (792)
+++++.+.+.+.|.+..- .+.......|+.|.+++++|.||-++.|..+ ..+|+. +.|+.++..+.....++
T Consensus 885 a~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~Q 964 (1034)
T KOG0204|consen 885 AVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQ 964 (1034)
T ss_pred HHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehh
Confidence 888888777665543321 1112456678999999999999999999755 355665 44554333333333333
Q ss_pred HHhhhccccccccccccChhHHHHHHHHHHHHHHHHHHHHHH
Q 045750 742 IAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRI 783 (792)
Q Consensus 742 ~~~~~~pl~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~ 783 (792)
+.+.. ..+.+|++.+++|.+|++++.+.++.+++..++|.+
T Consensus 965 viIve-F~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 965 VIIVE-FGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhhhh-hcCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 33222 278899999999999999999999999999999865
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-111 Score=978.42 Aligned_cols=681 Identities=26% Similarity=0.430 Sum_probs=593.6
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
++++++++..++++||+++++++++++++.+++++|+| ||++++|+++||+|||+|.+++||+|||||++++|
T Consensus 61 i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~R-------dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g 133 (755)
T TIGR01647 61 ILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLR-------DGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEG 133 (755)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE-------CCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEec
Confidence 35677888999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFE 159 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~ 159 (792)
+++.||||+|||||.|+.|.++ |.+|+||.+.+|+++++|++||.+|++|++.+.+++.+ ++++++
T Consensus 134 ~~~~VDeS~LTGES~PV~K~~~-------------~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq 200 (755)
T TIGR01647 134 DYIQVDQAALTGESLPVTKKTG-------------DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQ 200 (755)
T ss_pred CceEEEcccccCCccceEeccC-------------CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHH
Confidence 8789999999999999999887 66999999999999999999999999999999887655 456899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcc-cccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYF-TSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~ 238 (792)
+.+++++.+++++.++++++.++++++ .+.+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|+++++
T Consensus 201 ~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~al 280 (755)
T TIGR01647 201 KILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAI 280 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHH
Confidence 999999999888888877777777665 5678999999999999999999999999999999999999999999999999
Q ss_pred hcccceeEEEeccccccccCceEEEEeeCCCC-CCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEe
Q 045750 239 RDMGTMDILCIDKTGTLTMDRAIMVNHLDSWG-FPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKL 317 (792)
Q Consensus 239 e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~ 317 (792)
|+||++|++|||||||||+|+|++.+++...+ .+.++++.++.+++ +..++||+|.|+++++.+.+ .....++..
T Consensus 281 E~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~pi~~Ai~~~~~~~~--~~~~~~~~~ 356 (755)
T TIGR01647 281 EELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALAS--REEDQDAIDTAVLGSAKDLK--EARDGYKVL 356 (755)
T ss_pred HhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhC--CCCCCChHHHHHHHHHHHhH--HHHhcCceE
Confidence 99999999999999999999999999987643 66777888776544 45678999999999986543 123457788
Q ss_pred EEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhcc
Q 045750 318 DEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEG 397 (792)
Q Consensus 318 ~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 397 (792)
+.+||++.+|+++++++.+. ++ +++.++||+||.+++.|+.. ++.++++.+..++++.+|
T Consensus 357 ~~~pf~~~~k~~~~~v~~~~-~g-------~~~~~~kGa~e~il~~c~~~------------~~~~~~~~~~~~~~~~~G 416 (755)
T TIGR01647 357 EFVPFDPVDKRTEATVEDPE-TG-------KRFKVTKGAPQVILDLCDNK------------KEIEEKVEEKVDELASRG 416 (755)
T ss_pred EEeccCCCCCeEEEEEEeCC-Cc-------eEEEEEeCChHHHHHhcCCc------------HHHHHHHHHHHHHHHhCC
Confidence 99999999999999887531 23 56788999999999999743 345667788889999999
Q ss_pred CeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 398 LRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 398 ~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
+|++++|+++ .|++++|+|+++++||+||+++++|++||++||+++|+|||++.+|.++|+++||
T Consensus 417 ~rvl~vA~~~---------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI 481 (755)
T TIGR01647 417 YRALGVARTD---------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGL 481 (755)
T ss_pred CEEEEEEEEc---------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 9999999973 2568999999999999999999999999999999999999999999999999999
Q ss_pred CCC-----ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 478 RTT-----HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 478 ~~~-----~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
... .+.+|.+.+.++++++++.+.+..+|+|++|+||.++|+.+|++| ++|+|+|||.||+|+|++|||||||+
T Consensus 482 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G-~~VamvGDGvNDapAL~~AdVGIAm~ 560 (755)
T TIGR01647 482 GTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRG-HLVGMTGDGVNDAPALKKADVGIAVA 560 (755)
T ss_pred CCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcC-CEEEEEcCCcccHHHHHhCCeeEEec
Confidence 653 223344445778889999999999999999999999999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhh
Q 045750 553 SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSV 632 (792)
Q Consensus 553 ~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 632 (792)
+|++.+|++||+|+++|++..|.+++++||++|.|+++++.|.++.|+..+++.+++.++++ .|++|+|++|+|+++|+
T Consensus 561 ~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~ 639 (755)
T TIGR01647 561 GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG 639 (755)
T ss_pred CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999999999999999999998887777766555 35999999999999999
Q ss_pred hhhhcccCCCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHH---h-hhcccchHHHHHHHHHHHHHHHHH
Q 045750 633 GQIAIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFY---Y-EAYNQMNVVFFRSAWFVEGLLMQT 708 (792)
Q Consensus 633 ~~~~~~~~~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~---~-~~~~~~~~~~~~t~~f~~lv~~q~ 708 (792)
+++++++|++++. ++|++|+.+.+...+.+.|++.++..+..+++.+.. . ....+.+...++|++|..++++|.
T Consensus 640 ~~~~l~~~~~~~~--~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~ 717 (755)
T TIGR01647 640 TIMTIAYDNVKPS--KLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQ 717 (755)
T ss_pred hHhhccCCCCCCC--CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHH
Confidence 8999999999864 678888877777778888887776544444322210 0 011111345789999999999999
Q ss_pred HHHHHHhcCCcccccccchHHHHHHHHHHHHHHHHhh
Q 045750 709 LIIHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIP 745 (792)
Q Consensus 709 ~~~~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~ 745 (792)
++.+++|+++.+| ..++++++++++++..++.+++.
T Consensus 718 ~~~~~~r~~~~~~-~~~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 718 ATIFVTRTHGFFW-SERPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred HHHheeccCCCCc-ccCCcHHHHHHHHHHHHHHHHHh
Confidence 9999999988776 55789998888887777766554
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-114 Score=927.78 Aligned_cols=773 Identities=25% Similarity=0.357 Sum_probs=686.4
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|+.+++++.+..+||+.+..+.+++++++.|+.++|+| ||+...+.+++||+||++.++-||+||||.+++++
T Consensus 132 L~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViR-------dg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~ 204 (1019)
T KOG0203|consen 132 LAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIR-------DGEKMTINAEELVVGDLVEVKGGDRVPADIRIISA 204 (1019)
T ss_pred EEEEEEEEecCCCccchhhHHHHHHHhccchhhheeee-------cceeEEechhhcccccceeeccCCcccceeEEEEe
Confidence 45678889999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC-CCCCChHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDFE 159 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~-~~~~~~~~ 159 (792)
.+++||+|++||||+|..+.+...+ ...++..|+.|.+|.+.+|.++|+|++||.+|.+|+++..... ...+++++
T Consensus 205 ~g~~vdnsslTGesEP~~~~~~~t~---~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~ 281 (1019)
T KOG0203|consen 205 TGCKVDNSSLTGESEPQTRSPEFTH---ENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIA 281 (1019)
T ss_pred cceeEeccccccccCCccCCccccc---cCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcch
Confidence 9999999999999999999887553 3348999999999999999999999999999999999887654 55677899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIR 239 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e 239 (792)
+.++.+.+++...++++.+.++++....+.+|.+++.+.+.++++.+|++|+..++.++....+||+++++++||+.++|
T Consensus 282 ~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeave 361 (1019)
T KOG0203|consen 282 KEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVE 361 (1019)
T ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeehee
Confidence 99999999999999888888888887778899999999999999999999999999999999999999999999999999
Q ss_pred cccceeEEEeccccccccCceEEEEeeCCCCC-------------------CcHHHHHHHHhhcccc-------------
Q 045750 240 DMGTMDILCIDKTGTLTMDRAIMVNHLDSWGF-------------------PKENVLRFAFLNSYYK------------- 287 (792)
Q Consensus 240 ~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------------------~~~~~l~~a~~~~~~~------------- 287 (792)
+||..++||+|||||||+|+|+|.++|...+. +-.++.+.+.+++..+
T Consensus 362 tlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk 441 (1019)
T KOG0203|consen 362 TLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKR 441 (1019)
T ss_pred ecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeee
Confidence 99999999999999999999999998755432 1124555555444321
Q ss_pred CCCCCchHHHHHHHHHhc--CcccccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcc
Q 045750 288 TDQKYPLDDAILAYVYTN--GYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCS 365 (792)
Q Consensus 288 ~~~~~p~~~al~~~~~~~--~~~~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~ 365 (792)
.-.+++.|.|+++++... +....++.++.+.++||+|.+|..-.+.+.+.. ...+..+.+||+||.++++|+
T Consensus 442 ~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~------~~~~~~l~mKGape~il~~CS 515 (1019)
T KOG0203|consen 442 DVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDP------SDPRFLLVMKGAPERILDRCS 515 (1019)
T ss_pred eccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCC------CCccceeeecCChHHHHhhcc
Confidence 235789999999998642 224457788899999999999998887765421 223788999999999999999
Q ss_pred cccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccC----CCCCCCCCCCcEEEEecccCCCCCh
Q 045750 366 FVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQS----NRNDGPIESDMVFLGLITFYDPPKD 441 (792)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~i~~~d~~r~ 441 (792)
.+ ..+|+..|++++.++.+.+.+.++...|.||+++|++.++.++.+.. ...-+....++.|+|++++-||||.
T Consensus 516 Ti--~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~ 593 (1019)
T KOG0203|consen 516 TI--LINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRA 593 (1019)
T ss_pred ce--eecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcc
Confidence 99 68999999999999999999999999999999999998876533221 1112334578999999999999999
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC--------------------------CCCccccchhhhccCHHH
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI--------------------------RTTHVSTGPDLELLSQES 495 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi--------------------------~~~~~~~g~~~~~~~~~~ 495 (792)
.+++++.+||++||+++|+|||++.||+++|++.|| ..+.+++|.++.+++.++
T Consensus 594 ~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~q 673 (1019)
T KOG0203|consen 594 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQ 673 (1019)
T ss_pred cCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHH
Confidence 999999999999999999999999999999999997 135689999999999999
Q ss_pred HHHhhhcc--eEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCch
Q 045750 496 FHERVKRA--TVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLN 572 (792)
Q Consensus 496 ~~~~~~~~--~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~ 572 (792)
+++++.+. .||||.+|+||..||+.+|++| .+|+++|||+||.||||+||+||||| .|+|.+|++||++++||||.
T Consensus 674 ld~il~nh~eIVFARTSPqQKLiIVe~cQr~G-aiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFA 752 (1019)
T KOG0203|consen 674 LDELLQNHQEIVFARTSPQQKLIIVEGCQRQG-AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 752 (1019)
T ss_pred HHHHHHhCCceEEEecCccceEEeEhhhhhcC-cEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcch
Confidence 99998764 6999999999999999999999 99999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCC
Q 045750 573 VLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQ 651 (792)
Q Consensus 573 ~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~ 651 (792)
+|+..+++||.+|+|++|.|.|.++.|+.++.++++..++..|.|++++++|.+.+.+| +|++||+||++|.|+|+|||
T Consensus 753 SIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~P 832 (1019)
T KOG0203|consen 753 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPP 832 (1019)
T ss_pred hheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCC
Confidence 99999999999999999999999999999999999998999999999999999999999 78999999999999999988
Q ss_pred CCC-------CCCcchhhhhhhhHHHHHHHHHHHHHHHHhhh------------c----------ccc--h-------HH
Q 045750 652 IWS-------ENGLPMFILFNGPVCILCDVTALFFLWFYYEA------------Y----------NQM--N-------VV 693 (792)
Q Consensus 652 ~~~-------~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~------------~----------~~~--~-------~~ 693 (792)
|.. .+.+...+...|.++++..+++||..+...+. . .+. + ..
T Consensus 833 R~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~ 912 (1019)
T KOG0203|consen 833 RNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEY 912 (1019)
T ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHH
Confidence 762 35667889999999999888888765332111 0 000 0 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccc-ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHH
Q 045750 694 FFRSAWFVEGLLMQTLIIHLIRTEKIPFIQ-EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFI 771 (792)
Q Consensus 694 ~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~-~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~ 771 (792)
+.+|+.|.+++..|+..++.+.|+|.+.|+ +..||.+.++++.-.++++++.|.| ....+++.|++|.||+..+..++
T Consensus 913 tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~i 992 (1019)
T KOG0203|consen 913 TCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGI 992 (1019)
T ss_pred hhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEeccccee
Confidence 678889999999999999999999999776 5899999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCC
Q 045750 772 GYFTVGQLVKRIYILIYKKWL 792 (792)
Q Consensus 772 ~~l~~~e~iK~~~~~~~~~~~ 792 (792)
.+++.+|+.|.++|++...|+
T Consensus 993 lIfvydE~Rk~~IR~~P~gw~ 1013 (1019)
T KOG0203|consen 993 LIFVYDEVRKLFIRRYPGGWL 1013 (1019)
T ss_pred eeeeHHHHHhHhhhhCCCchh
Confidence 999999999999999988885
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-104 Score=954.00 Aligned_cols=721 Identities=23% Similarity=0.278 Sum_probs=571.3
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEEC--CCCeecccEEEEE
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFE--PGDLFPGDVRLLT 79 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~--~G~~iPaD~~ll~ 79 (792)
+++++++.++.++|++++.++++++.. .++.++|+| ||++++|+++||||||+|.++ +|++|||||++++
T Consensus 200 ~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~R-------dg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 200 VFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIR-------NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEE-------CCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe
Confidence 345677888899999999888877655 467999999 999999999999999999999 9999999999999
Q ss_pred eCCeEEEeccccCCCccccccccccc---C--CCCCCCcccceEeeccEEee-------eeEEEEEEeeccccHHHHHHh
Q 045750 80 SKHLVVSQSSLTGESWTAEKTADIRE---D--HCTPLLDLKNICFMGTNVVS-------GSGTGLVVSTGSKTYTSTMFS 147 (792)
Q Consensus 80 ~~~~~Vdes~ltGEs~p~~k~~~~~~---~--~~~~~~~~~~~v~~Gt~v~~-------g~~~~~V~~tG~~t~~~~~~~ 147 (792)
|+ +.||||+|||||.|+.|.+.+.. + ......+.+|++|+||.+.+ |.+.++|++||.+|..|++.+
T Consensus 272 g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~ 350 (1054)
T TIGR01657 272 GS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVR 350 (1054)
T ss_pred Cc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHH
Confidence 95 79999999999999999886431 1 11234578899999999995 789999999999999999999
Q ss_pred hhcCCC-CCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHh
Q 045750 148 TIGKQK-PPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMA 226 (792)
Q Consensus 148 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~ 226 (792)
.+...+ ..+++++...++..+++.++++.+++.++.....+.++.+.+..+++++++++|++||++++++++.++.+|+
T Consensus 351 ~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~ 430 (1054)
T TIGR01657 351 SILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLK 430 (1054)
T ss_pred HhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHH
Confidence 886543 4567888888877766655554444433333334567889999999999999999999999999999999999
Q ss_pred hcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCCC-------------cH-HHHHHHHhhcccc---CC
Q 045750 227 RDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFP-------------KE-NVLRFAFLNSYYK---TD 289 (792)
Q Consensus 227 ~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~-------------~~-~~l~~a~~~~~~~---~~ 289 (792)
|+|++||++.++|.+|++|++|||||||||+|+|.+.+++...... .. ....++.||+... ..
T Consensus 431 k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~ 510 (1054)
T TIGR01657 431 KKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKL 510 (1054)
T ss_pred HCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEE
Confidence 9999999999999999999999999999999999999987543210 11 1233445554322 23
Q ss_pred CCCchHHHHHHHHHhcCcccc--------------------cccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCce
Q 045750 290 QKYPLDDAILAYVYTNGYRFQ--------------------ASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGR 349 (792)
Q Consensus 290 ~~~p~~~al~~~~~~~~~~~~--------------------~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~ 349 (792)
.+||+|.|+++++. +... ...++.++++||+|++|||+++++.++ ++ ++
T Consensus 511 ~Gdp~E~al~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~-~~-------~~ 579 (1054)
T TIGR01657 511 VGDPLDKKMFEATG---WTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTND-ER-------SP 579 (1054)
T ss_pred ecCHHHHHHHHhCC---CEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcC-CC-------eE
Confidence 58999999999862 1110 246788999999999999999998642 22 57
Q ss_pred EEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccc-cCCCCCCCCCCCcE
Q 045750 350 FVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSA-QSNRNDGPIESDMV 428 (792)
Q Consensus 350 ~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~-~~~~~~~~~e~~l~ 428 (792)
++++|||||.|+++|+.. ..++++.+..++++.+|+||+++|||++++.... .....++++|+|++
T Consensus 580 ~~~~KGApE~Il~~c~~~-------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~ 646 (1054)
T TIGR01657 580 DAFVKGAPETIQSLCSPE-------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLT 646 (1054)
T ss_pred EEEEECCHHHHHHHcCCc-------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCce
Confidence 899999999999999842 1135567778999999999999999998632211 11234567899999
Q ss_pred EEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC----------------------------
Q 045750 429 FLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---------------------------- 480 (792)
Q Consensus 429 ~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---------------------------- 480 (792)
|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||...
T Consensus 647 flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 726 (1054)
T TIGR01657 647 FLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSI 726 (1054)
T ss_pred EEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcc
Confidence 9999999999999999999999999999999999999999999999999321
Q ss_pred ---------------------------ccccchhhhc---cCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEE
Q 045750 481 ---------------------------HVSTGPDLEL---LSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVG 530 (792)
Q Consensus 481 ---------------------------~~~~g~~~~~---~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~ 530 (792)
.+++|++++. +.++++.+.+.+..||||++|+||.++|+.+|+.| +.|+
T Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g-~~V~ 805 (1054)
T TIGR01657 727 PFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLD-YTVG 805 (1054)
T ss_pred ccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCC-CeEE
Confidence 2455666544 34567888888999999999999999999999999 9999
Q ss_pred EEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 531 FLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIAT 610 (792)
Q Consensus 531 ~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~ 610 (792)
|+|||.||+||||+|||||||+++ | +..+||+++.++++++|.++|++||+++.|++++++|.+.+++...+..++
T Consensus 806 m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-- 881 (1054)
T TIGR01657 806 MCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-- 881 (1054)
T ss_pred EEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999865 2 458899999999999999999999999999999999999999987666554
Q ss_pred HHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCC--CCcchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 045750 611 MFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSE--NGLPMFILFNGPVCILCDVTALFFLWFYYEAY 687 (792)
Q Consensus 611 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~--~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~ 687 (792)
++....|+++.|++|++++++ +++++++.++|++++|++||..+. +..+..++..+++..++.+..+.+... ..+.
T Consensus 882 l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~-~~~~ 960 (1054)
T TIGR01657 882 LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSNLFSVYILTSVLIQFVLHILSQVYLVFELHA-QPWY 960 (1054)
T ss_pred HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCc
Confidence 334457899999999999999 678999999999999998885432 112222333333333333333322211 0010
Q ss_pred ---c------cchHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-cchHHHHHHHHHHHHHHH--Hhhhcc-cccccc
Q 045750 688 ---N------QMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE-VASWPVLSSTLVISAIGI--AIPFTA-IGDVMG 754 (792)
Q Consensus 688 ---~------~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~~-~~n~~l~~~~~~~~~l~~--~~~~~p-l~~~f~ 754 (792)
. .......+|+.| .+..+|.+..+.+++.+.||.++ +.|+.+++++++..++++ ++.+.| ++.+|+
T Consensus 961 ~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1039 (1054)
T TIGR01657 961 KPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQ 1039 (1054)
T ss_pred cCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhhe
Confidence 0 111234567777 55566777778888888889887 578777777766655444 344677 999999
Q ss_pred ccccChhH
Q 045750 755 FTELPLTY 762 (792)
Q Consensus 755 ~~~l~~~~ 762 (792)
+.++|..|
T Consensus 1040 ~~~~~~~~ 1047 (1054)
T TIGR01657 1040 IVPLPQEF 1047 (1054)
T ss_pred eeeCCHHH
Confidence 99998654
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-94 Score=871.52 Aligned_cols=743 Identities=19% Similarity=0.210 Sum_probs=551.8
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccC-CeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQS-ELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~-g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
+++++++.+.+++|+++++++.++.+ +++++|+| + |++++++++||+|||+|.+++||+||||++++++
T Consensus 58 ~~v~~~~~~~~~~ed~~r~~~d~~~n---~~~~~v~~-------~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~s 127 (1057)
T TIGR01652 58 AFVLIVTAIKEAIEDIRRRRRDKEVN---NRLTEVLE-------GHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSS 127 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHh---CcEEEEEC-------CCCcEEEeeeecccCCCEEEEcCCCcccceEEEEec
Confidence 34566899999999999999887654 56899999 6 7999999999999999999999999999999997
Q ss_pred CC----eEEEeccccCCCcccccccccccC----------------------------------C-CCCCCcccceEeec
Q 045750 81 KH----LVVSQSSLTGESWTAEKTADIRED----------------------------------H-CTPLLDLKNICFMG 121 (792)
Q Consensus 81 ~~----~~Vdes~ltGEs~p~~k~~~~~~~----------------------------------~-~~~~~~~~~~v~~G 121 (792)
++ +.||||+||||+.|+.|.+..... . ....++.+|++++|
T Consensus 128 s~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rG 207 (1057)
T TIGR01652 128 SEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRG 207 (1057)
T ss_pred cCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcC
Confidence 65 899999999999999997642110 0 22356789999999
Q ss_pred cEEee-eeEEEEEEeeccccHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc-----ch----
Q 045750 122 TNVVS-GSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSK-----NL---- 191 (792)
Q Consensus 122 t~v~~-g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---- 191 (792)
|.+.+ |+++|+|++||.+|++++.. ...+.+.+++++.++++..+++.+.+++|++.+++..++.. .|
T Consensus 208 s~l~nt~~~~gvVvyTG~~Tk~~~n~--~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~ 285 (1057)
T TIGR01652 208 CTLRNTDWVIGVVVYTGHDTKLMRNA--TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRL 285 (1057)
T ss_pred CEecCCCeEEEEEEEEchhhhhhhcC--CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceec
Confidence 99999 89999999999999887543 22345678899999999988888877777776665433221 22
Q ss_pred -----------hHHHHHHHHHHHHHhcchhHHHHHHHHHHHH------HHHhhc----CCccccchhhhcccceeEEEec
Q 045750 192 -----------SESILFGISVACALTPQMFPLIVNTSLAKGA------LAMARD----RCVVKSLGAIRDMGTMDILCID 250 (792)
Q Consensus 192 -----------~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~------~~~~~~----~i~vk~~~~~e~lg~v~~i~~D 250 (792)
...+..++.++..++|++|++.+++....++ .+|.++ ++.+|+.+.+|+||++++||+|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sD 365 (1057)
T TIGR01652 286 DVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSD 365 (1057)
T ss_pred CcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEc
Confidence 2266778888899999999999999999998 778764 4999999999999999999999
Q ss_pred cccccccCceEEEEeeCCCC----------------C--------------------C----------------cHHHH-
Q 045750 251 KTGTLTMDRAIMVNHLDSWG----------------F--------------------P----------------KENVL- 277 (792)
Q Consensus 251 KTGTLT~~~~~v~~~~~~~~----------------~--------------------~----------------~~~~l- 277 (792)
||||||+|+|.+.++...+. . + ..+.+
T Consensus 366 KTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 445 (1057)
T TIGR01652 366 KTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFL 445 (1057)
T ss_pred CCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHH
Confidence 99999999999999852110 0 0 01222
Q ss_pred HHHHhhccc-c----------CCCCCchHHHHHHHHHhcCcccc----------------cccceEeEEeCCCCCCCeEE
Q 045750 278 RFAFLNSYY-K----------TDQKYPLDDAILAYVYTNGYRFQ----------------ASKWKKLDEIPFDFVRRKVS 330 (792)
Q Consensus 278 ~~a~~~~~~-~----------~~~~~p~~~al~~~~~~~~~~~~----------------~~~~~~~~~~~f~~~~k~~~ 330 (792)
.++.||+.. . +..++|+|.|++++++..|+.+. ...|+.++.+||+++||||+
T Consensus 446 ~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmS 525 (1057)
T TIGR01652 446 ALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMS 525 (1057)
T ss_pred HHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEE
Confidence 233444321 1 12579999999999998887652 24688899999999999999
Q ss_pred EEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCC
Q 045750 331 VILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLP 410 (792)
Q Consensus 331 v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~ 410 (792)
++++++ ++ ++++++|||||.|+++|+.. +++.++.+.+..++++.+|+||+++|+|.+++
T Consensus 526 viv~~~--~~-------~~~l~~KGA~e~il~~~~~~-----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~ 585 (1057)
T TIGR01652 526 VIVRNP--DG-------RIKLLCKGADTVIFKRLSSG-----------GNQVNEETKEHLENYASEGLRTLCIAYRELSE 585 (1057)
T ss_pred EEEEeC--CC-------eEEEEEeCcHHHHHHHhhcc-----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCH
Confidence 999875 23 57899999999999999742 13556778889999999999999999999976
Q ss_pred CccccCC------------------CCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 045750 411 QKSAQSN------------------RNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC 472 (792)
Q Consensus 411 ~~~~~~~------------------~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia 472 (792)
++..++. ...+++|+|++|+|+++++|++||+++++|+.|+++||++||+|||+.+||.++|
T Consensus 586 ~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA 665 (1057)
T TIGR01652 586 EEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIG 665 (1057)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHH
Confidence 5332110 0124578999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCC-------------------------------------------ccccchhhhccCHH----HHHHhhhc--c
Q 045750 473 HEVGIRTT-------------------------------------------HVSTGPDLELLSQE----SFHERVKR--A 503 (792)
Q Consensus 473 ~~~gi~~~-------------------------------------------~~~~g~~~~~~~~~----~~~~~~~~--~ 503 (792)
+++|+-.. .+++|++++.+.++ ++.+.... .
T Consensus 666 ~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~ 745 (1057)
T TIGR01652 666 YSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKA 745 (1057)
T ss_pred HHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCE
Confidence 99998321 25677776654433 23444443 4
Q ss_pred eEEEEeChhhHHHHHHHHhhc-CCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHH-HH
Q 045750 504 TVLARLTPTQKLRVVQSLQSV-GKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGV-ER 580 (792)
Q Consensus 504 ~v~~~~~p~~K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i-~~ 580 (792)
.||||++|+||.++|+.+|+. | ++|+|+|||.||++||++|||||++. ....+++.+||+++. +|+.+.+++ .|
T Consensus 746 vV~aR~sP~qK~~IV~~lk~~~~-~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~ 822 (1057)
T TIGR01652 746 VICCRVSPSQKADVVRLVKKSTG-KTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLVH 822 (1057)
T ss_pred EEEeCCCHHHHHHHHHHHHhcCC-CeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHhh
Confidence 599999999999999999998 6 99999999999999999999999984 333478999999995 499999998 99
Q ss_pred hHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHHHHHHHHHHhh-hhhhhccc--CCCCccccCCCCC-C
Q 045750 581 GRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQT---DPLTPKQLLTQNFLYS-VGQIAIPW--DKMEGDYVKTPQI-W 653 (792)
Q Consensus 581 gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~-~~~~~~~~--~~~~~~~m~~p~~-~ 653 (792)
||+.|.|+++.+.|.++.|+..++..++..++..+ .++.+.+++|.|++++ +|+++++. ++++++.|.++|+ |
T Consensus 823 GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly 902 (1057)
T TIGR01652 823 GRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLY 902 (1057)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHH
Confidence 99999999999999999999888888777666544 4678899999999988 78888864 3445566655443 3
Q ss_pred C----CCCcc----hhhhhhhhHHHHHHHHHHHHHHHHhhh----ccc--chHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 045750 654 S----ENGLP----MFILFNGPVCILCDVTALFFLWFYYEA----YNQ--MNVVFFRSAWFVEGLLMQTLIIHLIRTEKI 719 (792)
Q Consensus 654 ~----~~~l~----~~~~~~g~~~a~~~~~~~~~~~~~~~~----~~~--~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~ 719 (792)
+ .+.+. ..+.+.|++++++.++ +.++.+.. .++ .+.....++.|..+++...+.++. .+++|
T Consensus 903 ~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w 978 (1057)
T TIGR01652 903 REGQKGQGFSTKTFWGWMLDGIYQSLVIFF---FPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIAL-EINRW 978 (1057)
T ss_pred HHhhhcCCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHH-HHhHh
Confidence 2 22221 2233445555543322 22222111 111 134456667777776666666543 33343
Q ss_pred ccccccchHHHHHHHHHHHHHH-HHhhhcc----ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 720 PFIQEVASWPVLSSTLVISAIG-IAIPFTA----IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 720 ~~~~~~~n~~l~~~~~~~~~l~-~~~~~~p----l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
+++. +...+..+++.++. .+....+ +...+...-..+.+|+.+++..++.+++..++|.+.+.+
T Consensus 979 t~~~----~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~ 1047 (1057)
T TIGR01652 979 NWIS----LITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLF 1047 (1057)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3322 11112222211111 1111111 111111122356788888888888888888887665543
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-89 Score=818.87 Aligned_cols=743 Identities=19% Similarity=0.222 Sum_probs=541.1
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++++.+.+++++++|+.++.+ ++.++|.| +|++++++|++|+|||+|.+++||++|||+++++++
T Consensus 144 ~~vl~v~~ike~~Ed~~r~k~d~~~N---~~~~~v~~-------~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss 213 (1178)
T PLN03190 144 AFVLLVTAVKDAYEDWRRHRSDRIEN---NRLAWVLV-------DDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTS 213 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhc---CcEEEEEE-------CCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEecc
Confidence 46778899999999999999888764 56889998 999999999999999999999999999999999865
Q ss_pred C----eEEEeccccCCCcccccccccccC--------------------------------CCCCCCcccceEeeccEEe
Q 045750 82 H----LVVSQSSLTGESWTAEKTADIRED--------------------------------HCTPLLDLKNICFMGTNVV 125 (792)
Q Consensus 82 ~----~~Vdes~ltGEs~p~~k~~~~~~~--------------------------------~~~~~~~~~~~v~~Gt~v~ 125 (792)
+ ++||||+||||+.|+.|.+++... .....++.+|++++|+.+.
T Consensus 214 ~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~Lr 293 (1178)
T PLN03190 214 DPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELK 293 (1178)
T ss_pred CCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceec
Confidence 4 799999999999999998764311 1112466789999999999
Q ss_pred eee-EEEEEEeeccccHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc----c-----ch----
Q 045750 126 SGS-GTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTS----K-----NL---- 191 (792)
Q Consensus 126 ~g~-~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~---- 191 (792)
+.. ++|+|++||.+|+. +++....+.+.+++++.+|++..+++.+.+++|++..++...+. . .|
T Consensus 294 nT~~i~GvVVYTG~dTK~--~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~ 371 (1178)
T PLN03190 294 NTAWAIGVAVYCGRETKA--MLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRK 371 (1178)
T ss_pred CCceEEEEEEEechhhhH--hhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccc
Confidence 885 99999999999963 33444445567889999999998888888777777655532110 0 01
Q ss_pred -------------------hHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcC----------Cccccchhhhccc
Q 045750 192 -------------------SESILFGISVACALTPQMFPLIVNTSLAKGALAMARDR----------CVVKSLGAIRDMG 242 (792)
Q Consensus 192 -------------------~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~----------i~vk~~~~~e~lg 242 (792)
...+...+.++...+|.+|++.+.+.....+..+.++. +.+|+.+..|+||
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLG 451 (1178)
T PLN03190 372 DFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLG 451 (1178)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhc
Confidence 11122334566689999999999999987787777655 6799999999999
Q ss_pred ceeEEEeccccccccCceEEEEeeCCC----------------------C--------C--------------C-c----
Q 045750 243 TMDILCIDKTGTLTMDRAIMVNHLDSW----------------------G--------F--------------P-K---- 273 (792)
Q Consensus 243 ~v~~i~~DKTGTLT~~~~~v~~~~~~~----------------------~--------~--------------~-~---- 273 (792)
++++||+|||||||+|+|.+.++...+ + . + +
T Consensus 452 qV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (1178)
T PLN03190 452 QIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKH 531 (1178)
T ss_pred cceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHH
Confidence 999999999999999999999874210 0 0 0 0
Q ss_pred -HH-HHHHHHhhcccc---------------CCCCCchHHHHHHHHHhcCccc--------------ccccceEeEEeCC
Q 045750 274 -EN-VLRFAFLNSYYK---------------TDQKYPLDDAILAYVYTNGYRF--------------QASKWKKLDEIPF 322 (792)
Q Consensus 274 -~~-~l~~a~~~~~~~---------------~~~~~p~~~al~~~~~~~~~~~--------------~~~~~~~~~~~~f 322 (792)
.+ ++.+|.||.... +.+++|+|.|++++|.+.|+.+ ....|+.++.+||
T Consensus 532 i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF 611 (1178)
T PLN03190 532 VHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEF 611 (1178)
T ss_pred HHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecc
Confidence 11 223445554321 2345899999999999988732 4567899999999
Q ss_pred CCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEE
Q 045750 323 DFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIG 402 (792)
Q Consensus 323 ~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~ 402 (792)
+++||||+++++.+ ++ .+++++|||||.|+++|+... +++.++++.+..++++++|+||++
T Consensus 612 ~S~rKrMSvIv~~~--~~-------~~~l~~KGA~e~il~~~~~~~----------~~~~~~~~~~~l~~~a~~GlRtL~ 672 (1178)
T PLN03190 612 DSDRKRMSVILGCP--DK-------TVKVFVKGADTSMFSVIDRSL----------NMNVIRATEAHLHTYSSLGLRTLV 672 (1178)
T ss_pred cccccEEEEEEEcC--CC-------cEEEEEecCcHHHHHhhcccc----------cchhHHHHHHHHHHHHhcCCceEE
Confidence 99999999999864 23 678999999999999997541 234567788889999999999999
Q ss_pred EEEEecCCCccccCC------------------CCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCC
Q 045750 403 VAVKRLLPQKSAQSN------------------RNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDS 464 (792)
Q Consensus 403 ~a~~~~~~~~~~~~~------------------~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~ 464 (792)
+|||.+++++..++. ...+++|+|++++|+++++|++|++++++|++|+++|+++||+|||+
T Consensus 673 lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~ 752 (1178)
T PLN03190 673 VGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDK 752 (1178)
T ss_pred EEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCC
Confidence 999999765433221 11246799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCC---------------------------------------------------ccccchhhhccCH
Q 045750 465 LSLAIKICHEVGIRTT---------------------------------------------------HVSTGPDLELLSQ 493 (792)
Q Consensus 465 ~~~a~~ia~~~gi~~~---------------------------------------------------~~~~g~~~~~~~~ 493 (792)
.++|.++|+++|+-.. .+++|.++..+.+
T Consensus 753 ~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~ 832 (1178)
T PLN03190 753 QETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLD 832 (1178)
T ss_pred HHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhh
Confidence 9999999999998211 3456666665543
Q ss_pred ----HHHHHhhhc--ceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEe
Q 045750 494 ----ESFHERVKR--ATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIIL 566 (792)
Q Consensus 494 ----~~~~~~~~~--~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl 566 (792)
+.+.+...+ +.||||++|+||+++|+.+|+.+++.|+|+|||.||++||++|||||++. ....+|+.+||+.+
T Consensus 833 ~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI 912 (1178)
T PLN03190 833 SELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAM 912 (1178)
T ss_pred hHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccch
Confidence 344454444 45899999999999999999985589999999999999999999999873 44458999999999
Q ss_pred ccCCchHHHHHH-HHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc---hHHHHHHHHH-Hhhhhhhhcc-c-
Q 045750 567 LEKDLNVLVAGV-ERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPL---TPKQLLTQNF-LYSVGQIAIP-W- 639 (792)
Q Consensus 567 ~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~-~~~~~~~~~~-~- 639 (792)
+.|+.+.+++ .|||+.|.|+.+.+.|.++.|+..+++.+...++.++++- .++-+...|+ ++.+|.++++ +
T Consensus 913 --~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD 990 (1178)
T PLN03190 913 --GQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILD 990 (1178)
T ss_pred --hhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Confidence 6699999998 6999999999999999999999988888887777776543 4555544554 4558887764 3
Q ss_pred -CCCCccccCCCCCCCCC---Ccc-----hhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 045750 640 -DKMEGDYVKTPQIWSEN---GLP-----MFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLI 710 (792)
Q Consensus 640 -~~~~~~~m~~p~~~~~~---~l~-----~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~ 710 (792)
|-++..+++.|..|+.. ..+ ..+++.|++++++. |++.++.+... ..+.....+.++...++...+.
T Consensus 991 ~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~ii---ff~~~~~~~~~-~~~~~~~~~~~~~~~v~~vnl~ 1066 (1178)
T PLN03190 991 KDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVV---FFVPLFAYWAS-TIDGSSIGDLWTLAVVILVNLH 1066 (1178)
T ss_pred ccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHH---HHHHHHHhcCC-CcCceeEhHhhhhHHHHHHHHH
Confidence 45555677889887531 112 22233345554432 22222222111 1111122344555555555444
Q ss_pred HHHHhcCCcccccccchHHHHHHHHHHHHHHHHhhhcc-cc---ccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 711 IHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTA-IG---DVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYIL 786 (792)
Q Consensus 711 ~~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p-l~---~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~ 786 (792)
++ ..+++|+++... .+++++++.++..++....| .. .++.+. -.+.+|+.+++..++.++++.++|.+.+.
T Consensus 1067 i~-~~~~~wt~~~~~---~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~fwl~ill~~~~~l~p~~~~~~~~~~ 1141 (1178)
T PLN03190 1067 LA-MDIIRWNWITHA---AIWGSIVATFICVIVIDAIPTLPGYWAIFHIA-KTGSFWLCLLAIVVAALLPRFVVKVLYQY 1141 (1178)
T ss_pred HH-HHHhhhhHHHHH---HHHHHHHHHHHHHHHHHhcccchhHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 344344332221 11122222122211222222 11 222211 25678888888888888888888766553
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-90 Score=721.56 Aligned_cols=727 Identities=24% Similarity=0.364 Sum_probs=584.6
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|+.++++|++++|+||+++.++.++|+..+.+++.|+| ||+|.++++++||||||+.++.|++||||++++++
T Consensus 103 I~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlR-------DGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~g 175 (942)
T KOG0205|consen 103 ICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLR-------DGKWSEQEASILVPGDILSIKLGDIIPADARLLEG 175 (942)
T ss_pred hheeeeecceeeeeeccccchHHHHHHhccCcccEEee-------cCeeeeeeccccccCceeeeccCCEecCccceecC
Confidence 46789999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCCCChHHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEK 160 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~ 160 (792)
+-+.||+|+|||||.|++|.+|++ +|+||++++|++.++|++||.+|+.|+-+..+.......+|++
T Consensus 176 D~LkiDQSAlTGESLpvtKh~gd~-------------vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqk 242 (942)
T KOG0205|consen 176 DPLKIDQSALTGESLPVTKHPGDE-------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK 242 (942)
T ss_pred CccccchhhhcCCccccccCCCCc-------------eecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHH
Confidence 999999999999999999999976 9999999999999999999999999999999888777889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHH-HHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhh
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFG-ISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIR 239 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e 239 (792)
.++.+..++++.+++.-++.+.+.+....-........ +.+++..+|.++|.++++.++.|+.+++++|.++|+..++|
T Consensus 243 VLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIE 322 (942)
T KOG0205|consen 243 VLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 322 (942)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHH
Confidence 99999887766554433333333333332223333334 44455559999999999999999999999999999999999
Q ss_pred cccceeEEEeccccccccCceEEEE--e-eCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceE
Q 045750 240 DMGTMDILCIDKTGTLTMDRAIMVN--H-LDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKK 316 (792)
Q Consensus 240 ~lg~v~~i~~DKTGTLT~~~~~v~~--~-~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~ 316 (792)
+|+.+|++|+|||||||.|++++.+ + +...+.++++++..|++.+ .....|.+|.|++..... -+..+..++.
T Consensus 323 emAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAs--r~en~DAID~A~v~~L~d--PKeara~ike 398 (942)
T KOG0205|consen 323 EMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARAS--RKENQDAIDAAIVGMLAD--PKEARAGIKE 398 (942)
T ss_pred HhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHh--hhcChhhHHHHHHHhhcC--HHHHhhCceE
Confidence 9999999999999999999999998 4 5577889999999988777 445668999999998854 3556788999
Q ss_pred eEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhc
Q 045750 317 LDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNE 396 (792)
Q Consensus 317 ~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (792)
++.+||++..||.+..+.++ +| ..+.++||+|+.+++.|+.- .+.++++.+.+++++++
T Consensus 399 vhF~PFnPV~Krta~ty~d~--dG-------~~~r~sKGAPeqil~l~~~~------------~~i~~~vh~~id~~AeR 457 (942)
T KOG0205|consen 399 VHFLPFNPVDKRTALTYIDP--DG-------NWHRVSKGAPEQILKLCNED------------HDIPERVHSIIDKFAER 457 (942)
T ss_pred EeeccCCccccceEEEEECC--CC-------CEEEecCCChHHHHHHhhcc------------CcchHHHHHHHHHHHHh
Confidence 99999999999999988875 55 78899999999999999754 35678888999999999
Q ss_pred cCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 045750 397 GLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG 476 (792)
Q Consensus 397 g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~g 476 (792)
|+|-+++|++..++... +.-...+.|+|+.-+-||||.++.++|++....|+.|.|+|||...-++..++++|
T Consensus 458 GlRSLgVArq~v~e~~~-------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlg 530 (942)
T KOG0205|consen 458 GLRSLAVARQEVPEKTK-------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (942)
T ss_pred cchhhhhhhhccccccc-------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhc
Confidence 99999999988764322 12344578999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccchhh-----hccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 477 IRTTHVSTGPDL-----ELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 477 i~~~~~~~g~~~-----~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
...+.-.+++-+ .++.....++.+.+..-|+.+.|+||.++|+.+|+++ +.|+|+|||+||+|+++.||+|||+
T Consensus 531 mgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~-hi~gmtgdgvndapaLKkAdigiav 609 (942)
T KOG0205|consen 531 MGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERK-HIVGMTGDGVNDAPALKKADIGIAV 609 (942)
T ss_pred cccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcC-ceecccCCCcccchhhcccccceee
Confidence 965443333322 2233345677778888999999999999999999999 9999999999999999999999999
Q ss_pred cCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCchHHHHHHHHHHh
Q 045750 552 DSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLS-LLIATMFLQTDPLTPKQLLTQNFLY 630 (792)
Q Consensus 552 ~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~ 630 (792)
..+++.++.++|+|+.++.++.+..++..+|.+|+|++.+..|.++..+-.++. .++..+ ..+.|+|...+++.++.
T Consensus 610 a~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~alI--w~~df~pfmvliiailn 687 (942)
T KOG0205|consen 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALI--WEFDFSPFMVLIIAILN 687 (942)
T ss_pred ccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999998888765433 333322 23568899999999999
Q ss_pred hhhhhhcccCCCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhhhc-------ccchHHHHHHHHHHHH
Q 045750 631 SVGQIAIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAY-------NQMNVVFFRSAWFVEG 703 (792)
Q Consensus 631 ~~~~~~~~~~~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~-------~~~~~~~~~t~~f~~l 703 (792)
|.+.+.+++|...+. ..|..|+.+.++...++.|.++++.....|+......... ...+........|+.+
T Consensus 688 d~t~mtis~d~v~ps--p~pdswkl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqv 765 (942)
T KOG0205|consen 688 DGTIMTISKDRVKPS--PTPDSWKLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQV 765 (942)
T ss_pred CCceEEEEcccCCCC--CCCcccchhhhheeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhh
Confidence 988888888877643 5788999999999889999887766544332221111000 1112334445567777
Q ss_pred HHHHHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHHHhhhccccccccccccChhHHHHHHHHHHHHHHHHHHHHHH
Q 045750 704 LLMQTLIIHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRI 783 (792)
Q Consensus 704 v~~q~~~~~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~pl~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~ 783 (792)
.+....++|..|++.|+| ..++.+.+..+++....+..++....--.+-+.....|.|-...+++.+..+.+....|..
T Consensus 766 si~sqaliFvtrsr~w~~-~erpg~~L~~af~~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~ 844 (942)
T KOG0205|consen 766 SIISQALIFVTRSRSWSF-VERPGWLLLIAFFAAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFI 844 (942)
T ss_pred eehhceeeEEEeccCCcc-ccCcHHHHHHHHHHHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhhee
Confidence 777777778888876555 4467888877777665555444322111112233345554333445555555555555544
Q ss_pred HH
Q 045750 784 YI 785 (792)
Q Consensus 784 ~~ 785 (792)
.+
T Consensus 845 ~~ 846 (942)
T KOG0205|consen 845 IR 846 (942)
T ss_pred hh
Confidence 33
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-87 Score=749.02 Aligned_cols=512 Identities=23% Similarity=0.301 Sum_probs=427.1
Q ss_pred EEehHhHHHHHH----HHhHHHHHHHHhccCCC-CeE-EEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEE
Q 045750 4 LVLISVCLRFYQ----EYGSSKAAMKLSEFVRC-PIK-VQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRL 77 (792)
Q Consensus 4 ~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~-~~~-v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~l 77 (792)
+++++.+++.|+ |+|+++++++|+++.++ +++ |.| ||++++|++++|+|||+|.+++||+|||||++
T Consensus 71 ~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~r-------dg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~v 143 (673)
T PRK14010 71 ILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQ-------DGSYEMIDASDLKKGHIVRVATGEQIPNDGKV 143 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEe-------CCEEEEEEHHHcCCCCEEEECCCCcccCCeEE
Confidence 445566666666 78999999999999876 675 667 99999999999999999999999999999999
Q ss_pred EEeCCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCC
Q 045750 78 LTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPD 156 (792)
Q Consensus 78 l~~~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~ 156 (792)
++|.. .||||+|||||.|+.|.+|. |+++ +|+||.+.+|++.++|+++|.+|++|++.+.++..+ +++
T Consensus 144 ieG~~-~VDESaLTGES~PV~K~~g~---------d~~~-V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~kt 212 (673)
T PRK14010 144 IKGLA-TVDESAITGESAPVIKESGG---------DFDN-VIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKT 212 (673)
T ss_pred EEcce-EEecchhcCCCCceeccCCC---------ccCe-eecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCC
Confidence 99976 99999999999999999872 1223 999999999999999999999999999999887643 567
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccch
Q 045750 157 DFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLG 236 (792)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~ 236 (792)
++|.....+...++.+.++++ +++..+....++...+...++++++++||+|+..+++.+..|+.+|+|+|+++|+.+
T Consensus 213 p~e~~l~~l~~~l~ii~l~~~--~~~~~~~~~~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~ 290 (673)
T PRK14010 213 PNEIALFTLLMTLTIIFLVVI--LTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGR 290 (673)
T ss_pred HHHHHHHHHHHHHhHHHHHHH--HHHHHHHhhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcH
Confidence 788666555443333222222 111111111234456677788888899999999999999999999999999999999
Q ss_pred hhhcccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceE
Q 045750 237 AIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKK 316 (792)
Q Consensus 237 ~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~ 316 (792)
++|++|++|++|||||||||+|++.+.++.+..+.+.++++..+..+ +..+.||.++|+++++++.+.... ...
T Consensus 291 avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~---~~~s~~P~~~AIv~~a~~~~~~~~---~~~ 364 (673)
T PRK14010 291 SVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYES---SIADDTPEGRSIVKLAYKQHIDLP---QEV 364 (673)
T ss_pred HHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHh---cCCCCChHHHHHHHHHHHcCCCch---hhh
Confidence 99999999999999999999988888887766666666777766443 345679999999999987665321 112
Q ss_pred eEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhc
Q 045750 317 LDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNE 396 (792)
Q Consensus 317 ~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (792)
.+.+||++++|++++.++ + . .+.||+++.++++|+.. |...+ . ++.+..++++++
T Consensus 365 ~~~~pF~~~~k~~gv~~~-----g-------~--~i~kGa~~~il~~~~~~-----g~~~~--~----~~~~~~~~~a~~ 419 (673)
T PRK14010 365 GEYIPFTAETRMSGVKFT-----T-------R--EVYKGAPNSMVKRVKEA-----GGHIP--V----DLDALVKGVSKK 419 (673)
T ss_pred cceeccccccceeEEEEC-----C-------E--EEEECCHHHHHHHhhhc-----CCCCc--h----HHHHHHHHHHhC
Confidence 345899999999998653 1 2 45599999999999742 21111 1 244556778899
Q ss_pred cCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 045750 397 GLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG 476 (792)
Q Consensus 397 g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~g 476 (792)
|+|+++++. |++++|+++++||+|||++++|++||++||+++|+|||++.+|.++|+++|
T Consensus 420 G~~~l~v~~--------------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 420 GGTPLVVLE--------------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred CCeEEEEEE--------------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 999998753 458999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcH
Q 045750 477 IRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGAS 556 (792)
Q Consensus 477 i~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~ 556 (792)
+++ +|+|++|+||.++|+.+|++| +.|+|+|||.||+|+|++||||||||+|++
T Consensus 480 I~~-------------------------v~A~~~PedK~~iV~~lQ~~G-~~VaMtGDGvNDAPALa~ADVGIAMgsGTd 533 (673)
T PRK14010 480 VDR-------------------------FVAECKPEDKINVIREEQAKG-HIVAMTGDGTNDAPALAEANVGLAMNSGTM 533 (673)
T ss_pred Cce-------------------------EEcCCCHHHHHHHHHHHHhCC-CEEEEECCChhhHHHHHhCCEEEEeCCCCH
Confidence 974 899999999999999999999 999999999999999999999999999999
Q ss_pred HHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 557 VAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMF 612 (792)
Q Consensus 557 ~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~ 612 (792)
.+|++||+|+++||+..|.+++++||++|.|+++++.|.++.|+..++..+.+.+.
T Consensus 534 vAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 534 SAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred HHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887776665443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-85 Score=736.10 Aligned_cols=502 Identities=23% Similarity=0.284 Sum_probs=427.1
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCC-CeEEEecCCccccCCe-EEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRC-PIKVQRCAGRVVQSEL-IVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~v~r~~~~~~~~g~-~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
+++...++.++|+|+++++++|+++.++ +++|+| +|+ +++|++++|++||+|.+++||+|||||++++|.
T Consensus 76 vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir-------~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~- 147 (679)
T PRK01122 76 VLFANFAEALAEGRGKAQADSLRGAKKDTFARKLR-------EPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV- 147 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEE-------CCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-
Confidence 4556677889999999999999999875 699999 776 899999999999999999999999999999997
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKG 161 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~ 161 (792)
..||||++||||.|+.|.+|++ + +.+|+||.+.+|++.++|+++|.+|.+|++.+.++.. +.+++++..
T Consensus 148 a~VDESaLTGES~PV~K~~G~~---------~-~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~a 217 (679)
T PRK01122 148 ASVDESAITGESAPVIRESGGD---------F-SSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIA 217 (679)
T ss_pred EEEEcccccCCCCceEeCCCCc---------c-CeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHH
Confidence 5999999999999999998843 1 3399999999999999999999999999999888764 345778887
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcc
Q 045750 162 VRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241 (792)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~l 241 (792)
.+.+...++.++++.++.++.+.++.+.. .++..++++++++|||+++...+.....++.+|+|+|+++|+.+++|+|
T Consensus 218 l~~l~~~l~~i~l~~~~~~~~~~~~~g~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~l 295 (679)
T PRK01122 218 LTILLAGLTIIFLLVVATLPPFAAYSGGA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAA 295 (679)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHhCch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHh
Confidence 77766555544444333333332222223 3788889999999999999999999999999999999999999999999
Q ss_pred cceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHh-cCcccccccceEeEEe
Q 045750 242 GTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYT-NGYRFQASKWKKLDEI 320 (792)
Q Consensus 242 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~-~~~~~~~~~~~~~~~~ 320 (792)
|++|++|||||||||+|+|.++++++.++.+.++++..+..+ +..+.||.++|+++++++ .+.......++..+.+
T Consensus 296 g~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~---s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~ 372 (679)
T PRK01122 296 GDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLS---SLADETPEGRSIVVLAKQRFNLRERDLQSLHATFV 372 (679)
T ss_pred cCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHh---cCCCCCchHHHHHHHHHhhcCCCchhhccccceeE
Confidence 999999999999999999999999887777777888777544 345578999999999876 2433222235567889
Q ss_pred CCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCee
Q 045750 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRV 400 (792)
Q Consensus 321 ~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rv 400 (792)
||++.++++++.++ + ..+.||++|.+++.|... |... .+++.+..++++++|.|+
T Consensus 373 pF~s~~~~~gv~~~-------------g-~~~~kGa~e~il~~~~~~-----g~~~------~~~~~~~~~~~a~~G~~~ 427 (679)
T PRK01122 373 PFSAQTRMSGVDLD-------------G-REIRKGAVDAIRRYVESN-----GGHF------PAELDAAVDEVARKGGTP 427 (679)
T ss_pred eecCcCceEEEEEC-------------C-EEEEECCHHHHHHHHHhc-----CCcC------hHHHHHHHHHHHhCCCcE
Confidence 99999888887542 1 368999999999999632 2111 245666778899999999
Q ss_pred EEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 401 IGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 401 l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
+++|+ |++++|+++++|++|||++++|++||++||+++|+|||++.+|.++|+++|+++
T Consensus 428 l~va~--------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~- 486 (679)
T PRK01122 428 LVVAE--------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD- 486 (679)
T ss_pred EEEEE--------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-
Confidence 99985 358999999999999999999999999999999999999999999999999965
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD 560 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~ 560 (792)
+++|++|+||.++|+.+|++| +.|+|+|||.||+|+|++||||||||+|++.+|+
T Consensus 487 ------------------------v~A~~~PedK~~iV~~lQ~~G-~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAke 541 (679)
T PRK01122 487 ------------------------FLAEATPEDKLALIRQEQAEG-RLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKE 541 (679)
T ss_pred ------------------------EEccCCHHHHHHHHHHHHHcC-CeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHH
Confidence 899999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHH
Q 045750 561 LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANL 600 (792)
Q Consensus 561 ~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~ 600 (792)
+||+|+++||+..|.+++++||++.-+--..-.|++..-+
T Consensus 542 AADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 542 AGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred hCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999998554455677766444
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-83 Score=700.60 Aligned_cols=729 Identities=23% Similarity=0.303 Sum_probs=539.6
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECC-CCeecccEEEEEeC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEP-GDLFPGDVRLLTSK 81 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~-G~~iPaD~~ll~~~ 81 (792)
++...+.....||.++.++.+.++-.. +.+|+|+| ||.|++|+++|||||||+.+.+ |-..|||+++++|+
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R-------~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~ 293 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIR-------DGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD 293 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEE-------CCEEEEEeccccccccEEEECCCCeEeecceEEEeCc
Confidence 345567788888888888876665554 46889999 9999999999999999999998 88999999999998
Q ss_pred CeEEEeccccCCCcccccccccccC------CCCCCCcccceEeeccEEee------eeEEEEEEeeccccHHHHHHhhh
Q 045750 82 HLVVSQSSLTGESWTAEKTADIRED------HCTPLLDLKNICFMGTNVVS------GSGTGLVVSTGSKTYTSTMFSTI 149 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~------~~~~~~~~~~~v~~Gt~v~~------g~~~~~V~~tG~~t~~~~~~~~~ 149 (792)
+ .||||+|||||.|+.|.+.+... ......+.+|.+|+||++++ +.+.++|++||.+|..|++.+.+
T Consensus 294 c-ivNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsi 372 (1140)
T KOG0208|consen 294 C-IVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSI 372 (1140)
T ss_pred E-EeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhh
Confidence 5 89999999999999999875221 12234577899999999986 44899999999999999999999
Q ss_pred cCCCCC-ChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhc
Q 045750 150 GKQKPP-DDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARD 228 (792)
Q Consensus 150 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~ 228 (792)
-.+++. .++-+..-++...+.+++++..+...+.....+.+....+.+++.++...+|++||.++++....+..|+.|+
T Consensus 373 lyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk 452 (1140)
T KOG0208|consen 373 LYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKK 452 (1140)
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhc
Confidence 876643 3444444444444444444443344444445667888999999999999999999999999999999999999
Q ss_pred CCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCC---------------------------Cc--HHHHHH
Q 045750 229 RCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGF---------------------------PK--ENVLRF 279 (792)
Q Consensus 229 ~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---------------------------~~--~~~l~~ 279 (792)
||.|-++..+...|++|++|||||||||++.+.+..+.+..+. .+ ......
T Consensus 453 ~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~ 532 (1140)
T KOG0208|consen 453 GIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAM 532 (1140)
T ss_pred CeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHH
Confidence 9999999999999999999999999999999999877542210 00 123344
Q ss_pred HHhhccc---cCCCCCchHHHHHHHHH--------------hcC----------------ccc-ccccceEeEEeCCCCC
Q 045750 280 AFLNSYY---KTDQKYPLDDAILAYVY--------------TNG----------------YRF-QASKWKKLDEIPFDFV 325 (792)
Q Consensus 280 a~~~~~~---~~~~~~p~~~al~~~~~--------------~~~----------------~~~-~~~~~~~~~~~~f~~~ 325 (792)
|.||+.. ..-.+||+|.-+.+.-. +.+ ... ....+.+++.+||+|.
T Consensus 533 atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~ 612 (1140)
T KOG0208|consen 533 ATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSA 612 (1140)
T ss_pred hhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchh
Confidence 5555432 12346776554443210 000 000 1125788999999999
Q ss_pred CCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEE
Q 045750 326 RRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAV 405 (792)
Q Consensus 326 ~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~ 405 (792)
-+||||++.+++. . ...+|+|||||.|.+.|+.. ...+++++..++|+.+|+|++++|+
T Consensus 613 LrRMSVIv~~~~e-~-------~~~~ftKGaPE~I~~ic~p~-------------tvP~dy~evl~~Yt~~GfRVIAlA~ 671 (1140)
T KOG0208|consen 613 LRRMSVIVSTGGE-D-------KMMVFTKGAPESIAEICKPE-------------TVPADYQEVLKEYTHQGFRVIALAS 671 (1140)
T ss_pred hheEEEEEecCCC-C-------ceEeeccCCHHHHHHhcCcc-------------cCCccHHHHHHHHHhCCeEEEEEec
Confidence 9999999998643 2 78999999999999999854 1234577888999999999999999
Q ss_pred EecCCC-ccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC------
Q 045750 406 KRLLPQ-KSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR------ 478 (792)
Q Consensus 406 ~~~~~~-~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~------ 478 (792)
|+++.. -.......++.+|+|++|+|++.|++++|++++.+|++|+++.||.+|+||||..||..+||+||+-
T Consensus 672 K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v 751 (1140)
T KOG0208|consen 672 KELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKV 751 (1140)
T ss_pred CccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeE
Confidence 998765 1123345788999999999999999999999999999999999999999999999999999999990
Q ss_pred ---------------------------------------------------CCccccchhhhcc---CHHHHHHhhhcce
Q 045750 479 ---------------------------------------------------TTHVSTGPDLELL---SQESFHERVKRAT 504 (792)
Q Consensus 479 ---------------------------------------------------~~~~~~g~~~~~~---~~~~~~~~~~~~~ 504 (792)
....++|+.+..+ ..+.++.++.+..
T Consensus 752 ~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~ 831 (1140)
T KOG0208|consen 752 IIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGT 831 (1140)
T ss_pred EEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCe
Confidence 0123344443322 3566777888999
Q ss_pred EEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHHh
Q 045750 505 VLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVT 584 (792)
Q Consensus 505 v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~ 584 (792)
||||++|+||.++++.+|+.| +.|+|+|||+||+.|||+||+||+.+.+ +|.-+|.++-.-.+.+.+.+.|++||+.
T Consensus 832 VfARMsP~qK~~Lie~lQkl~-y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp~vIrEGRaA 908 (1140)
T KOG0208|consen 832 VFARMSPDQKAELIEALQKLG-YKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVPDVIREGRAA 908 (1140)
T ss_pred EEeecCchhHHHHHHHHHhcC-cEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHhHHHhhhhhh
Confidence 999999999999999999999 9999999999999999999999999743 4666788887777999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhh-hhhhcccCCCCccccCCCCCCCC--CCcchh
Q 045750 585 FGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSV-GQIAIPWDKMEGDYVKTPQIWSE--NGLPMF 661 (792)
Q Consensus 585 ~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~m~~p~~~~~--~~l~~~ 661 (792)
+......++|...|.+.....+++ +++.-..++..|.+++.++..+ .++.+++..+...+-..||..+. +..+..
T Consensus 909 LVTSf~~FkYMalYs~iqFisv~~--LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~ 986 (1140)
T KOG0208|consen 909 LVTSFACFKYMALYSAIQFISVVF--LYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVP 986 (1140)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhhe--eeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhh
Confidence 999999999999998876555443 4455567899999999999885 47888887777777655444322 222222
Q ss_pred hhhhhhHHHHHHHHHHHHH----HHHh-hhcccch-HHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-cchHHHHHHH
Q 045750 662 ILFNGPVCILCDVTALFFL----WFYY-EAYNQMN-VVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE-VASWPVLSST 734 (792)
Q Consensus 662 ~~~~g~~~a~~~~~~~~~~----~~~~-~~~~~~~-~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~~-~~n~~l~~~~ 734 (792)
.+...+...+.++..++.. |+.. ......+ .+...|..|+.. .+|........+.+.||.++ |.|+.+....
T Consensus 987 l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS-~fqYi~~a~v~S~g~pfr~pl~~n~~f~~~i 1065 (1140)
T KOG0208|consen 987 LLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVS-SFQYIFIALVLSKGSPFRRPLWKNVLFKVFI 1065 (1140)
T ss_pred hHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehh-HHHHHHhheeeccCCcccCchhcCceeeeeh
Confidence 2222222222222211111 2221 0111111 223334445544 45666666677788888886 6777665554
Q ss_pred HHHHHHHHHhhhcc----ccccccccccChhHHHHHH
Q 045750 735 LVISAIGIAIPFTA----IGDVMGFTELPLTYFGFLL 767 (792)
Q Consensus 735 ~~~~~l~~~~~~~p----l~~~f~~~~l~~~~w~~~l 767 (792)
.+.......++.++ ....+++.+.+-....+.+
T Consensus 1066 ~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~~fii 1102 (1140)
T KOG0208|consen 1066 TVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFDRFII 1102 (1140)
T ss_pred hhHHhhhhhhhhccccchhhhhhceeccCcchhHHHH
Confidence 44444444555544 2234778887764443333
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-82 Score=706.12 Aligned_cols=507 Identities=22% Similarity=0.271 Sum_probs=428.8
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCCC-eEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCe
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCP-IKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHL 83 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~ 83 (792)
+++...++.++|+|+++++++|+++.++. ++|+|. ||++++|++++|+|||+|.+++||+|||||++++|. +
T Consensus 77 vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~------dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~ 149 (675)
T TIGR01497 77 VLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRD------DGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-A 149 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEee------CCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-E
Confidence 45666777799999999999999998764 778752 789999999999999999999999999999999996 5
Q ss_pred EEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHHH
Q 045750 84 VVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKGV 162 (792)
Q Consensus 84 ~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~~ 162 (792)
.||||++||||.|+.|.+|+.. +.+|+||.+.+|++.++|+++|.+|++|++.+.++.. .+++++|...
T Consensus 150 ~VDESaLTGES~PV~K~~g~~~----------~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l 219 (675)
T TIGR01497 150 SVDESAITGESAPVIKESGGDF----------ASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIAL 219 (675)
T ss_pred EEEcccccCCCCceeecCCCCc----------ceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHH
Confidence 9999999999999999998531 2399999999999999999999999999999988754 3467888887
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhccc
Q 045750 163 RRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMG 242 (792)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg 242 (792)
+.+..++..+.++.+..++.+..+.+ ....+...+++++++|||+++...+.....++.+|+|+|+++|+..++|++|
T Consensus 220 ~~l~~~l~~v~li~~~~~~~~~~~~~--~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg 297 (675)
T TIGR01497 220 TILLIALTLVFLLVTATLWPFAAYGG--NAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACG 297 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--hhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhh
Confidence 77766555443333322222211111 2235777789999999999887777777789999999999999999999999
Q ss_pred ceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCC
Q 045750 243 TMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPF 322 (792)
Q Consensus 243 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f 322 (792)
++|++|||||||||+|+|++.++++..+.+.+++++.+.++ +..+.||.++|+++++++.|.......+...+..||
T Consensus 298 ~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~---~~~s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf 374 (675)
T TIGR01497 298 DVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLA---SLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEF 374 (675)
T ss_pred CCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHh---cCCCCCcHHHHHHHHHHHcCCCccccccccceEEEE
Confidence 99999999999999999999999877777778888877553 445689999999999987765543333455678999
Q ss_pred CCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEE
Q 045750 323 DFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIG 402 (792)
Q Consensus 323 ~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~ 402 (792)
++.++++++.+.+ ...+.||++|.+++.|... |... ..++.+..++++++|.|+++
T Consensus 375 ~~~~~~sg~~~~~-------------g~~~~kGa~e~i~~~~~~~-----g~~~------~~~~~~~~~~~a~~G~r~l~ 430 (675)
T TIGR01497 375 TAQTRMSGINLDN-------------GRMIRKGAVDAIKRHVEAN-----GGHI------PTDLDQAVDQVARQGGTPLV 430 (675)
T ss_pred cCCCcEEEEEEeC-------------CeEEEECCHHHHHHHHHhc-----CCCC------cHHHHHHHHHHHhCCCeEEE
Confidence 9998777664421 1368899999999988522 2111 13456667889999999999
Q ss_pred EEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc
Q 045750 403 VAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV 482 (792)
Q Consensus 403 ~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~ 482 (792)
+|++ .+++|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++|+++
T Consensus 431 va~~--------------------~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~--- 487 (675)
T TIGR01497 431 VCED--------------------NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD--- 487 (675)
T ss_pred EEEC--------------------CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE---
Confidence 9963 38999999999999999999999999999999999999999999999999975
Q ss_pred ccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhc
Q 045750 483 STGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLA 562 (792)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~a 562 (792)
++++++|++|.++++.+|++| +.|+|+|||.||+|||++||+||||++|++.++++|
T Consensus 488 ----------------------v~a~~~PedK~~~v~~lq~~g-~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaa 544 (675)
T TIGR01497 488 ----------------------FIAEATPEDKIALIRQEQAEG-KLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAA 544 (675)
T ss_pred ----------------------EEcCCCHHHHHHHHHHHHHcC-CeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC
Confidence 899999999999999999999 899999999999999999999999999999999999
Q ss_pred CEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHH
Q 045750 563 DIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGV 603 (792)
Q Consensus 563 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~ 603 (792)
|++++++|+..|.+++++||+++.+-.....|++..++.-.
T Consensus 545 divLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 545 NMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred CEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 99999999999999999999999988888899988776543
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-81 Score=699.28 Aligned_cols=494 Identities=26% Similarity=0.338 Sum_probs=428.7
Q ss_pred ehHhHHHHHHHH---hHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 6 LISVCLRFYQEY---GSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 6 ~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
++-.+.+++|++ |+.+++++|.++.|+++++.+. ||++++||.++|++||+|.|+|||+||+||+|++|++
T Consensus 182 ~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~------~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s 255 (713)
T COG2217 182 FLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRG------DGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS 255 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEec------CCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE
Confidence 334444555555 5666777888888999988873 4458999999999999999999999999999999998
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKG 161 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~ 161 (792)
.||||++||||.|+.|.+|++ |++||.+.+|.....|+++|.+|.++++.+.+++. ..+.+.|+.
T Consensus 256 -~vDeS~iTGEs~PV~k~~Gd~-------------V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrl 321 (713)
T COG2217 256 -SVDESMLTGESLPVEKKPGDE-------------VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRL 321 (713)
T ss_pred -EeecchhhCCCCCEecCCCCE-------------EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHH
Confidence 999999999999999999966 99999999999999999999999999999998764 356789999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccc-cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 162 VRRISFVLICVMLIVATIIILIDYFTS-KNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.++++.++++..++++.+.+++|++.. .+|..++..++++++++|||+|.+++|+++..+..+.+|+|+++|+..++|.
T Consensus 322 aDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~ 401 (713)
T COG2217 322 ADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALER 401 (713)
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHh
Confidence 999999999988888888777777666 5799999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEe
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEI 320 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~ 320 (792)
++++|+++||||||||+|+|++.++...++ +++++|++| +..|..+.||+.+||+++++..+.. .....+.+
T Consensus 402 l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~e~~~L~la---AalE~~S~HPiA~AIv~~a~~~~~~----~~~~~~~i 473 (713)
T COG2217 402 LAKVDTVVFDKTGTLTEGKPEVTDVVALDG-DEDELLALA---AALEQHSEHPLAKAIVKAAAERGLP----DVEDFEEI 473 (713)
T ss_pred hccCCEEEEeCCCCCcCCceEEEEEecCCC-CHHHHHHHH---HHHHhcCCChHHHHHHHHHHhcCCC----Cccceeee
Confidence 999999999999999999999999998877 788899888 5678899999999999999876621 11123344
Q ss_pred CCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCee
Q 045750 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRV 400 (792)
Q Consensus 321 ~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rv 400 (792)
| .+.+...+. ...+..|+++.+.+.-... +. ..+..+.+..+|..+
T Consensus 474 ~----G~Gv~~~v~--------------g~~v~vG~~~~~~~~~~~~-----------~~-----~~~~~~~~~~~G~t~ 519 (713)
T COG2217 474 P----GRGVEAEVD--------------GERVLVGNARLLGEEGIDL-----------PL-----LSERIEALESEGKTV 519 (713)
T ss_pred c----cCcEEEEEC--------------CEEEEEcCHHHHhhcCCCc-----------cc-----hhhhHHHHHhcCCeE
Confidence 4 222322221 1356678887765422111 00 233456778889888
Q ss_pred EEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 401 IGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 401 l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
+.++. |.+++|+++++|++||+++++|++||+.|++++|+|||+..+|+++|+++||+.
T Consensus 520 v~va~--------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~- 578 (713)
T COG2217 520 VFVAV--------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE- 578 (713)
T ss_pred EEEEE--------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-
Confidence 88876 348999999999999999999999999999999999999999999999999975
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD 560 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~ 560 (792)
+++++.|++|.++|+.+|+.| ++|+|+|||.||+|+|.+||||||||.|+|.+++
T Consensus 579 ------------------------v~AellPedK~~~V~~l~~~g-~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~e 633 (713)
T COG2217 579 ------------------------VRAELLPEDKAEIVRELQAEG-RKVAMVGDGINDAPALAAADVGIAMGSGTDVAIE 633 (713)
T ss_pred ------------------------heccCCcHHHHHHHHHHHhcC-CEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHH
Confidence 899999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHH
Q 045750 561 LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLL 607 (792)
Q Consensus 561 ~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~ 607 (792)
+||+++++||+..+.++|+.+|+++.++++|+.|.+.+|...+....
T Consensus 634 aADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~ 680 (713)
T COG2217 634 AADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAA 680 (713)
T ss_pred hCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986654443
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-77 Score=636.29 Aligned_cols=722 Identities=22% Similarity=0.276 Sum_probs=538.6
Q ss_pred HhHHHHHHHHhccC--CCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECC---CCeecccEEEEEeCCeEEEecccc
Q 045750 17 YGSSKAAMKLSEFV--RCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEP---GDLFPGDVRLLTSKHLVVSQSSLT 91 (792)
Q Consensus 17 ~~~~~~~~~l~~~~--~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~---G~~iPaD~~ll~~~~~~Vdes~lt 91 (792)
+++.+.+.+++++- |..+.|+| +++|+.+.++||.|||+|.|.. ...||||.+++.|++ .|||++||
T Consensus 236 ~Qrm~~lse~R~Mg~kpy~I~v~R-------~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLt 307 (1160)
T KOG0209|consen 236 KQRMRTLSEFRTMGNKPYTINVYR-------NKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLT 307 (1160)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEe-------cCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhc
Confidence 34556666666664 45678888 9999999999999999999976 467999999999986 89999999
Q ss_pred CCCcccccccccccCCCC----CCCcccceEeeccEEee-------------eeEEEEEEeeccccHHHHHHhhhcCCCC
Q 045750 92 GESWTAEKTADIREDHCT----PLLDLKNICFMGTNVVS-------------GSGTGLVVSTGSKTYTSTMFSTIGKQKP 154 (792)
Q Consensus 92 GEs~p~~k~~~~~~~~~~----~~~~~~~~v~~Gt~v~~-------------g~~~~~V~~tG~~t~~~~~~~~~~~~~~ 154 (792)
|||.|..|.+....+.+. .-.++.+++|.||++++ |.+.+.|++||.+|..|++.+.+-...+
T Consensus 308 GESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~ae 387 (1160)
T KOG0209|consen 308 GESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAE 387 (1160)
T ss_pred CCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecce
Confidence 999999998864433221 12346689999999984 5589999999999999999998864322
Q ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc-----cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHh
Q 045750 155 ---PDDFEKGVRRISFVLICVMLIVATIIILIDYFTS-----KNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMA 226 (792)
Q Consensus 155 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~ 226 (792)
.+..+ +.+++.+.+++|++....-|.-+ .+-...++-++.++...+|+.||+-++++.-.+...++
T Consensus 388 rvTaNn~E------tf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALa 461 (1160)
T KOG0209|consen 388 RVTANNRE------TFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALA 461 (1160)
T ss_pred eeeeccHH------HHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHH
Confidence 22222 23334444455555443333222 22334566777788889999999999999999999999
Q ss_pred hcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCC----------CCCcHHHHHHHHhhcccc---CCCCCc
Q 045750 227 RDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSW----------GFPKENVLRFAFLNSYYK---TDQKYP 293 (792)
Q Consensus 227 ~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~----------~~~~~~~l~~a~~~~~~~---~~~~~p 293 (792)
|.+++|..|-.+.-.|++|+.|||||||||+..|.+.++-... ..+.+.++.+|+||+... .-.|||
T Consensus 462 k~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDP 541 (1160)
T KOG0209|consen 462 KLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDP 541 (1160)
T ss_pred HhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCCh
Confidence 9999999999999999999999999999999999999875421 224457888888887653 347999
Q ss_pred hHHHHHHHHHhcCcccc-----------cccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHH
Q 045750 294 LDDAILAYVYTNGYRFQ-----------ASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIK 362 (792)
Q Consensus 294 ~~~al~~~~~~~~~~~~-----------~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~ 362 (792)
.|+|.++.. |+... ....++.+.+.|+|..|||+++++.+..++ ...++..+|||||++.+
T Consensus 542 lEKA~l~~v---~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~-----s~k~~~aVKGAPEvi~~ 613 (1160)
T KOG0209|consen 542 LEKATLEAV---GWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGS-----SEKYFVAVKGAPEVIQE 613 (1160)
T ss_pred HHHHHHHhc---CcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCC-----ceEEEEEecCCHHHHHH
Confidence 999999876 44431 124677899999999999999998753221 13799999999999998
Q ss_pred hcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCcc-ccCCCCCCCCCCCcEEEEecccCCCCCh
Q 045750 363 VCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKS-AQSNRNDGPIESDMVFLGLITFYDPPKD 441 (792)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~-~~~~~~~~~~e~~l~~lG~i~~~d~~r~ 441 (792)
+.+.. .+++++.+.+|+++|.||++++||++..-.. +..+.+++++|+||+|.|++.|.-|+|+
T Consensus 614 ml~dv---------------P~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~ 678 (1160)
T KOG0209|consen 614 MLRDV---------------PKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKP 678 (1160)
T ss_pred HHHhC---------------chhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCc
Confidence 77655 3567778899999999999999999874322 2234678899999999999999999999
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC-------------------------------------------
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR------------------------------------------- 478 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~------------------------------------------- 478 (792)
|++++|+++++.+++++|+|||++.||.++|+++|+.
T Consensus 679 Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~ 758 (1160)
T KOG0209|consen 679 DSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAET 758 (1160)
T ss_pred cHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhh
Confidence 9999999999999999999999999999999999992
Q ss_pred CCccccchhhhccCH-HHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH
Q 045750 479 TTHVSTGPDLELLSQ-ESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASV 557 (792)
Q Consensus 479 ~~~~~~g~~~~~~~~-~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~ 557 (792)
.+..++|..++.+.. +.+.+.+..+.||||+.|.||..++..+++.| +.++|+|||.||+.+||+||||||.-+++.+
T Consensus 759 ~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~G-y~TLMCGDGTNDVGALK~AhVGVALL~~~~e 837 (1160)
T KOG0209|consen 759 HDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLG-YVTLMCGDGTNDVGALKQAHVGVALLNNPEE 837 (1160)
T ss_pred hhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcC-eEEEEecCCCcchhhhhhcccceehhcCChh
Confidence 123455666665543 34667778899999999999999999999999 9999999999999999999999998533320
Q ss_pred H-----------------------------------------------------------------------HhhcCEEe
Q 045750 558 A-----------------------------------------------------------------------KDLADIIL 566 (792)
Q Consensus 558 ~-----------------------------------------------------------------------~~~ad~vl 566 (792)
. .-+|-+.-
T Consensus 838 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTs 917 (1160)
T KOG0209|consen 838 SKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTS 917 (1160)
T ss_pred hhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCcccccccccccccccc
Confidence 0 00122222
Q ss_pred ccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhhhhhhcccCCCCccc
Q 045750 567 LEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDY 646 (792)
Q Consensus 567 ~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 646 (792)
...+.+.|.+.|++||++..+..++++......+...++. +.++....-|+..|.....+++....+.+...+|-+.+
T Consensus 918 K~asv~~v~~IIrQGRctLVtTlQMfKILALN~LisAYsl--SvlyldGVKfgD~QaTisGlLla~cFlfISrskPLetL 995 (1160)
T KOG0209|consen 918 KLASVSSVTHIIRQGRCTLVTTLQMFKILALNCLISAYSL--SVLYLDGVKFGDTQATISGLLLAACFLFISRSKPLETL 995 (1160)
T ss_pred ccchHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH--HHhhhcCceecchhHhHHHHHHHHHHhheecCCchhhH
Confidence 3346778899999999999999999887655555444433 33555557789999999999988777888888887777
Q ss_pred cCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhh--h------------cccchHHHHHHHHHHHHHHHHHHHHH
Q 045750 647 VKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYE--A------------YNQMNVVFFRSAWFVEGLLMQTLIIH 712 (792)
Q Consensus 647 m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~--~------------~~~~~~~~~~t~~f~~lv~~q~~~~~ 712 (792)
.+..|.. .++..+.+..+. .++.+.+..+++.- . ......+...|..|+..+..|+.+ |
T Consensus 996 SkeRP~~---nIFN~Y~i~svl---~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsT-F 1068 (1160)
T KOG0209|consen 996 SKERPLP---NIFNVYIILSVL---LQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVST-F 1068 (1160)
T ss_pred hhcCCCC---CcchHHHHHHHH---HHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHH-h
Confidence 6554443 245555443332 23333322222211 1 111235667777777665656555 6
Q ss_pred HHhcCCcccccc-cchHHHHHHHHHHHHHHH--Hhhhcc-ccccccccccChhHH----HHHHHHHHHHHHHHHHHHHHH
Q 045750 713 LIRTEKIPFIQE-VASWPVLSSTLVISAIGI--AIPFTA-IGDVMGFTELPLTYF----GFLLLLFIGYFTVGQLVKRIY 784 (792)
Q Consensus 713 ~~r~~~~~~~~~-~~n~~l~~~~~~~~~l~~--~~~~~p-l~~~f~~~~l~~~~w----~~~l~~~~~~l~~~e~iK~~~ 784 (792)
.+.+++.||... +-|..++++++++..+.. +.-+.| ++..|.+.++|-.+- .++.+-.++++++..+.|++.
T Consensus 1069 AVNY~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f 1148 (1160)
T KOG0209|consen 1069 AVNYQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFF 1148 (1160)
T ss_pred hhhccCcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 788889999887 568888888776654444 334456 999999999985553 333444556666666776654
Q ss_pred H
Q 045750 785 I 785 (792)
Q Consensus 785 ~ 785 (792)
.
T Consensus 1149 ~ 1149 (1160)
T KOG0209|consen 1149 G 1149 (1160)
T ss_pred c
Confidence 4
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-78 Score=631.81 Aligned_cols=734 Identities=20% Similarity=0.242 Sum_probs=541.9
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
.++++++.+.+..+++++.+.....++. ..++... +|.... +++++++||+|.+.++|+||||.+++.++
T Consensus 136 ~fvl~itl~keavdd~~r~~rd~~~Nse---~y~~ltr------~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTs 205 (1051)
T KOG0210|consen 136 GFVLTITLIKEAVDDLKRRRRDRELNSE---KYTKLTR------DGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTS 205 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhh---hheeecc------CCcccc-cccccccccEEEEecCCcCCcceEEEEcc
Confidence 3567788888998888888766655443 4455431 555444 99999999999999999999999999865
Q ss_pred C----eEEEeccccCCCccccccccccc----------------------------------CCCCCCCcccceEeeccE
Q 045750 82 H----LVVSQSSLTGESWTAEKTADIRE----------------------------------DHCTPLLDLKNICFMGTN 123 (792)
Q Consensus 82 ~----~~Vdes~ltGEs~p~~k~~~~~~----------------------------------~~~~~~~~~~~~v~~Gt~ 123 (792)
+ +.+-+-.|+||++-+.|-+.+.. ++..+.++-+|.++++|.
T Consensus 206 d~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTV 285 (1051)
T KOG0210|consen 206 DKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTV 285 (1051)
T ss_pred CCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeee
Confidence 4 78999999999987777553211 122346788999999999
Q ss_pred EeeeeEEEEEEeeccccHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHH
Q 045750 124 VVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVAC 203 (792)
Q Consensus 124 v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 203 (792)
+.+|.++|+|+|||.+|+ ..++....+.+-..++..+|.+.++++.++++++++......+. ..|...+++++.++.
T Consensus 286 vAs~t~~gvVvYTG~dtR--svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~-~~wyi~~~RfllLFS 362 (1051)
T KOG0210|consen 286 VASGTAIGVVVYTGRDTR--SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG-SDWYIYIIRFLLLFS 362 (1051)
T ss_pred EecCcEEEEEEEecccHH--HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHh
Confidence 999999999999999994 34555555555567888899999999999999988888777665 789999999999999
Q ss_pred HHhcchhHHHHHHHHHHHHHHHhhc----CCccccchhhhcccceeEEEeccccccccCceEEEEeeCCC----------
Q 045750 204 ALTPQMFPLIVNTSLAKGALAMARD----RCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSW---------- 269 (792)
Q Consensus 204 ~~~P~~l~~~~~~~~~~~~~~~~~~----~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~---------- 269 (792)
..+|.+|-..+.++.......+.++ |.++|+....|+||+++++.+|||||||+|+|.+.+++-..
T Consensus 363 ~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~e 442 (1051)
T KOG0210|consen 363 SIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDE 442 (1051)
T ss_pred hhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHH
Confidence 9999999999999888888887765 57899999999999999999999999999999998874211
Q ss_pred -----------C-C----------------CcHHHHHHHHhhcc---------ccCCCCCchHHHHHHHHHhcCccc---
Q 045750 270 -----------G-F----------------PKENVLRFAFLNSY---------YKTDQKYPLDDAILAYVYTNGYRF--- 309 (792)
Q Consensus 270 -----------~-~----------------~~~~~l~~a~~~~~---------~~~~~~~p~~~al~~~~~~~~~~~--- 309 (792)
+ . -.+.++.+|.||+. ..++..+|+|.|++++-...|..+
T Consensus 443 V~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~R 522 (1051)
T KOG0210|consen 443 VSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKR 522 (1051)
T ss_pred HHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeec
Confidence 0 0 01345667777643 234567999999999887777654
Q ss_pred ------------ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCccc
Q 045750 310 ------------QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITS 377 (792)
Q Consensus 310 ------------~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~ 377 (792)
....|+++..+||++++|||+++++++. ++ +...|.|||+.+|...-..
T Consensus 523 d~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~-~~-------evtfylKGAD~VMs~iVq~----------- 583 (1051)
T KOG0210|consen 523 DRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDET-TE-------EVTFYLKGADVVMSGIVQY----------- 583 (1051)
T ss_pred ccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCC-Cc-------eEEEEEecchHHHhccccc-----------
Confidence 3357999999999999999999999874 33 7899999998877553322
Q ss_pred CCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCC-------------------CCCCCCCcEEEEecccCCC
Q 045750 378 FTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRN-------------------DGPIESDMVFLGLITFYDP 438 (792)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~-------------------~~~~e~~l~~lG~i~~~d~ 438 (792)
.+.+++...+++++|+|++++|.|.+++++++..+.. ...+|+|+.++|+.+.||+
T Consensus 584 -----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDk 658 (1051)
T KOG0210|consen 584 -----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDK 658 (1051)
T ss_pred -----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHH
Confidence 2345556678999999999999999987654332111 1257899999999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC------------------------------CCCccccchhh
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI------------------------------RTTHVSTGPDL 488 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi------------------------------~~~~~~~g~~~ 488 (792)
++++++.+++.||++|||+||+|||..+||..+|+..++ +...+++|+.+
T Consensus 659 LQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl 738 (1051)
T KOG0210|consen 659 LQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESL 738 (1051)
T ss_pred HhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchH
Confidence 999999999999999999999999999999999999998 23567888877
Q ss_pred hccC---HHHHHHhhh--cceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe-cCCcHHHHhhc
Q 045750 489 ELLS---QESFHERVK--RATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-DSGASVAKDLA 562 (792)
Q Consensus 489 ~~~~---~~~~~~~~~--~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~-~~~~~~~~~~a 562 (792)
+... ++++-++.+ ...++|||+|+||+++++.+|++.+..|++||||.||++|+++||+||++ |+...+|.-+|
T Consensus 739 ~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 739 EFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 6544 344444433 57899999999999999999998669999999999999999999999998 47778899999
Q ss_pred CEEeccCCchHHHHHH-HHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch----HHHHHHHHHHhhhhhhhc
Q 045750 563 DIILLEKDLNVLVAGV-ERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLT----PKQLLTQNFLYSVGQIAI 637 (792)
Q Consensus 563 d~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~ 637 (792)
|+-+ +.|..+.+++ .|||..|+|..+.-+|.+...+.......+.+..+.|.|.. -..+.+..+.+.+|.+|+
T Consensus 819 DfSI--tqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl 896 (1051)
T KOG0210|consen 819 DFSI--TQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL 896 (1051)
T ss_pred cccH--HHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee
Confidence 9988 5699998888 79999999999999999999976655544444433333432 234556666666888888
Q ss_pred ccCCC--CccccCCCCCCCC----CCcchhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHH
Q 045750 638 PWDKM--EGDYVKTPQIWSE----NGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLII 711 (792)
Q Consensus 638 ~~~~~--~~~~m~~p~~~~~----~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~ 711 (792)
..|.. +...+.+|+.|++ +.+...-.+..+..++++-.+...+.+..... +.....++.|..+++......
T Consensus 897 v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~---ef~~ivaisFtaLi~tELiMV 973 (1051)
T KOG0210|consen 897 VLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT---EFIHIVAISFTALILTELIMV 973 (1051)
T ss_pred eecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh---hheEeeeeeeHHHHHHHHHHH
Confidence 87655 3335677888764 33322222222223333322221111111110 111123455777766666554
Q ss_pred HHHhcCCcccccccchHHHHHHHHHHHHHHHHhhhcc-ccccccccc-cChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 712 HLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTE-LPLTYFGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 712 ~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~-l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
....+ .|.|.++.+-++.+.+.+ .+.| ++++|...- +++.|++-+.++.++.+++.+..|.++||.
T Consensus 974 aLtv~--------tw~~~m~vae~lsL~~Yi--vsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~ 1041 (1051)
T KOG0210|consen 974 ALTVR--------TWHWLMVVAELLSLALYI--VSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKL 1041 (1051)
T ss_pred hhhhh--------hhhHHHHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33221 134555555444444433 3344 677665444 344444444556666677788888776653
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-76 Score=680.64 Aligned_cols=493 Identities=26% Similarity=0.321 Sum_probs=429.7
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
+++++...++.++++|+++.+++|.++.|++++++| ||++++|++++|+|||+|.+++||+|||||+|++|+.
T Consensus 214 ~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir-------~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~ 286 (741)
T PRK11033 214 LLFLIGERLEGYAASRARRGVSALMALVPETATRLR-------DGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA 286 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEE-------CCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE
Confidence 456677788888889999999999999999999999 9999999999999999999999999999999999975
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKG 161 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~ 161 (792)
.||||+|||||.|+.|.+|+ .||+||.+.+|.+.+.|+++|.+|.++++.+.+++. .+++++++.
T Consensus 287 -~vdes~lTGEs~Pv~k~~Gd-------------~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~ 352 (741)
T PRK11033 287 -SFDESALTGESIPVERATGE-------------KVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERF 352 (741)
T ss_pred -EeecccccCCCCCEecCCCC-------------eeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHH
Confidence 99999999999999999984 499999999999999999999999999999888763 346789999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh-cccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 162 VRRISFVLICVMLIVATIIILID-YFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
+++++.++++++++++++.++++ ++.+.+|...+..++++++++|||+|.++.|+++..+..+++|+|+++|+.+++|+
T Consensus 353 ~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~ 432 (741)
T PRK11033 353 IDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQ 432 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHH
Confidence 99999999999888888887776 33456788899999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEe
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEI 320 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~ 320 (792)
|+++|++|||||||||+|+|++.++.+.++.++++++.++. ..+..+.||+++|+++++++.+.. +
T Consensus 433 l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~aa---~~e~~s~hPia~Ai~~~a~~~~~~-----------~ 498 (741)
T PRK11033 433 LGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLALAA---AVEQGSTHPLAQAIVREAQVRGLA-----------I 498 (741)
T ss_pred hhCCCEEEEeCCCCCcCCceEEEEEEecCCCCHHHHHHHHH---HHhcCCCCHHHHHHHHHHHhcCCC-----------C
Confidence 99999999999999999999999998777777888888773 456788999999999999766543 3
Q ss_pred CCCCCCCeEE-EEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCe
Q 045750 321 PFDFVRRKVS-VILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLR 399 (792)
Q Consensus 321 ~f~~~~k~~~-v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r 399 (792)
||.++++.+. .-++.. .++ . .+..|+++.+.+ +++ .+.+..+++..+|++
T Consensus 499 ~~~~~~~~~~g~Gv~~~-~~g-------~--~~~ig~~~~~~~---------------~~~----~~~~~~~~~~~~g~~ 549 (741)
T PRK11033 499 PEAESQRALAGSGIEGQ-VNG-------E--RVLICAPGKLPP---------------LAD----AFAGQINELESAGKT 549 (741)
T ss_pred CCCcceEEEeeEEEEEE-ECC-------E--EEEEecchhhhh---------------ccH----HHHHHHHHHHhCCCE
Confidence 5555555442 112211 111 2 234577776532 112 233445678899999
Q ss_pred eEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 400 VIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 400 vl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
++++++ |.+++|+++++|++||+++++|++|+++|++++|+|||+..++.++|+++||+
T Consensus 550 ~v~va~--------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~- 608 (741)
T PRK11033 550 VVLVLR--------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID- 608 (741)
T ss_pred EEEEEE--------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-
Confidence 999997 34899999999999999999999999999999999999999999999999995
Q ss_pred CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH
Q 045750 480 THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAK 559 (792)
Q Consensus 480 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~ 559 (792)
.+++..|++|.++++.+|+. +.|+|+|||.||+|||++||+||+||++++.++
T Consensus 609 -------------------------~~~~~~p~~K~~~v~~l~~~--~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~ 661 (741)
T PRK11033 609 -------------------------FRAGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAMKAASIGIAMGSGTDVAL 661 (741)
T ss_pred -------------------------eecCCCHHHHHHHHHHHhcC--CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHH
Confidence 46778999999999999965 479999999999999999999999999999999
Q ss_pred hhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHH
Q 045750 560 DLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLL 607 (792)
Q Consensus 560 ~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~ 607 (792)
++||+++.++++..+.++++.||+++.|+++|+.|.+.+|...+...+
T Consensus 662 ~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 662 ETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999976554443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-74 Score=644.70 Aligned_cols=475 Identities=32% Similarity=0.456 Sum_probs=420.1
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhc--cCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEE
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSE--FVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLL 78 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll 78 (792)
+++++++...++.+++++++++.+++++ ..|++++|+| +| +++|++++|+|||+|.+++||+|||||+++
T Consensus 2 i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r-------~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl 73 (499)
T TIGR01494 2 ILILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLR-------NG-WKEIPASDLVPGDIVLVKSGEIVPADGVLL 73 (499)
T ss_pred EEEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-------CC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEE
Confidence 3577888999999999999999999998 8899999999 88 899999999999999999999999999999
Q ss_pred EeCCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCC-CCh
Q 045750 79 TSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKP-PDD 157 (792)
Q Consensus 79 ~~~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~-~~~ 157 (792)
+|. +.||||+|||||.|+.|.+++. +++|+.+.+|+..+.|+.+|.+|..+++...+..... +++
T Consensus 74 ~g~-~~vdes~LTGEs~pv~k~~g~~-------------v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~ 139 (499)
T TIGR01494 74 SGS-CFVDESNLTGESVPVLKTAGDA-------------VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTP 139 (499)
T ss_pred Ecc-EEEEcccccCCCCCeeeccCCc-------------cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCc
Confidence 996 5999999999999999999844 8999999999999999999999999999888765443 567
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHhhhhhccccc---chhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccc
Q 045750 158 FEKGVRRIS-FVLICVMLIVATIIILIDYFTSK---NLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVK 233 (792)
Q Consensus 158 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk 233 (792)
+++..+++. .+++++.++++++.++++..... +|.+++.+++++++.+|||+|++++++++..+..+++++|+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk 219 (499)
T TIGR01494 140 LQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVR 219 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEe
Confidence 888888888 66666666666666555543322 37889999999999999999999999999999999999999999
Q ss_pred cchhhhcccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCccccccc
Q 045750 234 SLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASK 313 (792)
Q Consensus 234 ~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~ 313 (792)
+++++|+||++|++|||||||||+|+|++.++...+. +..++||+|.|++++++..
T Consensus 220 ~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~----------------~~~s~hp~~~ai~~~~~~~-------- 275 (499)
T TIGR01494 220 SLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG----------------EYLSGHPDERALVKSAKWK-------- 275 (499)
T ss_pred chhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------CcCCCChHHHHHHHHhhhc--------
Confidence 9999999999999999999999999999999875432 3467899999999998542
Q ss_pred ceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHH
Q 045750 314 WKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEEL 393 (792)
Q Consensus 314 ~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (792)
.....||++.+++++++++.+ + + .+.||+++.+.+.|... .+..+++
T Consensus 276 --~~~~~~f~~~~~~~~~~~~~~--~--------~--~~~~G~~~~i~~~~~~~-------------------~~~~~~~ 322 (499)
T TIGR01494 276 --ILNVFEFSSVRKRMSVIVRGP--D--------G--TYVKGAPEFVLSRVKDL-------------------EEKVKEL 322 (499)
T ss_pred --CcceeccCCCCceEEEEEecC--C--------c--EEEeCCHHHHHHhhHHH-------------------HHHHHHH
Confidence 234679999999999998752 1 1 37899999999988522 1223456
Q ss_pred hhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 045750 394 SNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH 473 (792)
Q Consensus 394 ~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~ 473 (792)
+.+|+|++++|++. +++|++.++|++|++++++|+.|+++|++++|+|||++.++..+|+
T Consensus 323 ~~~g~~~~~~a~~~--------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~ 382 (499)
T TIGR01494 323 AQSGLRVLAVASKE--------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAK 382 (499)
T ss_pred HhCCCEEEEEEECC--------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 78999999999754 7999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 474 EVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 474 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
++|+ +++++|++|.++++.+|+.| +.|+|+|||.||++|+++||+||+|+
T Consensus 383 ~lgi----------------------------~~~~~p~~K~~~v~~l~~~g-~~v~~vGDg~nD~~al~~Advgia~~- 432 (499)
T TIGR01494 383 ELGI----------------------------FARVTPEEKAALVEALQKKG-RVVAMTGDGVNDAPALKKADVGIAMG- 432 (499)
T ss_pred HcCc----------------------------eeccCHHHHHHHHHHHHHCC-CEEEEECCChhhHHHHHhCCCccccc-
Confidence 9986 58899999999999999998 99999999999999999999999997
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHH
Q 045750 554 GASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLI 608 (792)
Q Consensus 554 ~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~ 608 (792)
++++||+++.++++..+..++.+||+++.++++++.|.+.+|+..+.+.+.
T Consensus 433 ----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 433 ----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred ----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999886555543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-77 Score=685.66 Aligned_cols=746 Identities=20% Similarity=0.225 Sum_probs=544.7
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|++++.++++++.+|++|+.+..+++++. ++.|.|. ++.+++..|+++++||+|.+..+|.+|||.+++++
T Consensus 87 l~~vl~~t~iKd~~eD~rR~~~D~~iN~~---~~~v~~~------~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLss 157 (1151)
T KOG0206|consen 87 LLFVLGITAIKDAIEDYRRHKQDKEVNNR---KVEVLRG------DGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSS 157 (1151)
T ss_pred eeeeehHHHHHHHHhhhhhhhccHHhhcc---eeEEecC------CceeeeeccceeeeeeEEEeccCCccccceEEecC
Confidence 57899999999999999999998877665 8889883 23389999999999999999999999999999998
Q ss_pred CC----eEEEeccccCCCcccccccccccC---------------------------------CCCC-CCcccceEeecc
Q 045750 81 KH----LVVSQSSLTGESWTAEKTADIRED---------------------------------HCTP-LLDLKNICFMGT 122 (792)
Q Consensus 81 ~~----~~Vdes~ltGEs~p~~k~~~~~~~---------------------------------~~~~-~~~~~~~v~~Gt 122 (792)
+. |+|++++|+||+..+.|+...... .... +++.+|++++|+
T Consensus 158 s~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~ 237 (1151)
T KOG0206|consen 158 SDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGS 237 (1151)
T ss_pred CCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCc
Confidence 76 899999999999999886532110 0011 678889999999
Q ss_pred EEeeee-EEEEEEeeccccHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc------------
Q 045750 123 NVVSGS-GTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSK------------ 189 (792)
Q Consensus 123 ~v~~g~-~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 189 (792)
++.+++ +.|+|++||.+|+.++. ....+.+.+.+++.++.....++.+.+.++.+..+....+..
T Consensus 238 ~lrNT~~v~G~vv~tG~dtK~~~n--~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 315 (1151)
T KOG0206|consen 238 RLRNTEWVYGVVVFTGHDTKLMQN--SGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYL 315 (1151)
T ss_pred eeccCcEEEEEEEEcCCcchHHHh--cCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhh
Confidence 999987 99999999999977643 333555677899999999888877777777666554332211
Q ss_pred -------chhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH------HHh----hcCCccccchhhhcccceeEEEeccc
Q 045750 190 -------NLSESILFGISVACALTPQMFPLIVNTSLAKGAL------AMA----RDRCVVKSLGAIRDMGTMDILCIDKT 252 (792)
Q Consensus 190 -------~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~------~~~----~~~i~vk~~~~~e~lg~v~~i~~DKT 252 (792)
.....+..++.++...+|.+|...+.+.....+. .|. ...+.+|+.+..|+||++++|++|||
T Consensus 316 ~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKT 395 (1151)
T KOG0206|consen 316 SPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKT 395 (1151)
T ss_pred cCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCc
Confidence 0122345556677788999999887777666553 232 23578999999999999999999999
Q ss_pred cccccCceEEEEeeCCCC----------------C----------------------------C----cHHHHHHHHhhc
Q 045750 253 GTLTMDRAIMVNHLDSWG----------------F----------------------------P----KENVLRFAFLNS 284 (792)
Q Consensus 253 GTLT~~~~~v~~~~~~~~----------------~----------------------------~----~~~~l~~a~~~~ 284 (792)
||||+|.|.+.++...+. . . .+-...+|.||+
T Consensus 396 GTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~cht 475 (1151)
T KOG0206|consen 396 GTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHT 475 (1151)
T ss_pred CccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccce
Confidence 999999999988743210 0 0 011223455543
Q ss_pred cc----------cCCCCCchHHHHHHHHHhcCccc--------------ccccceEeEEeCCCCCCCeEEEEEeeCCCCc
Q 045750 285 YY----------KTDQKYPLDDAILAYVYTNGYRF--------------QASKWKKLDEIPFDFVRRKVSVILETESITE 340 (792)
Q Consensus 285 ~~----------~~~~~~p~~~al~~~~~~~~~~~--------------~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~ 340 (792)
.. .+...+|+|.|+++.|++.|+.+ ....|+.++..+|+|.||||||+++.+ ++
T Consensus 476 v~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p--~g 553 (1151)
T KOG0206|consen 476 VIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDP--DG 553 (1151)
T ss_pred eeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcC--CC
Confidence 32 34467899999999999988765 356899999999999999999999987 44
Q ss_pred cccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCC--
Q 045750 341 DRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNR-- 418 (792)
Q Consensus 341 ~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~-- 418 (792)
...+|||||+.+|.++++.. ....+++-.++.++|+.+|+|++|+|||.++++++..|..
T Consensus 554 -------~i~LycKGADsvI~erL~~~-----------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~ 615 (1151)
T KOG0206|consen 554 -------RILLYCKGADSVIFERLSKN-----------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERY 615 (1151)
T ss_pred -------cEEEEEcCcchhhHhhhhhc-----------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHH
Confidence 78999999999999999842 2566777788999999999999999999998876544421
Q ss_pred ----------------CCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---
Q 045750 419 ----------------NDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--- 479 (792)
Q Consensus 419 ----------------~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--- 479 (792)
..+.+|+||+++|.+++||+++++++++|+.|++||||+|++|||..+||.+++..|++-.
T Consensus 616 ~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m 695 (1151)
T KOG0206|consen 616 NEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDM 695 (1151)
T ss_pred HHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCc
Confidence 1356899999999999999999999999999999999999999999999999999999821
Q ss_pred ----------------------------------------------CccccchhhhccCHHH----HHHh--hhcceEEE
Q 045750 480 ----------------------------------------------THVSTGPDLELLSQES----FHER--VKRATVLA 507 (792)
Q Consensus 480 ----------------------------------------------~~~~~g~~~~~~~~~~----~~~~--~~~~~v~~ 507 (792)
+.+++|..+....+++ +.+. -++.++||
T Consensus 696 ~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCC 775 (1151)
T KOG0206|consen 696 KLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICC 775 (1151)
T ss_pred eEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEc
Confidence 1234444443332221 1122 24678999
Q ss_pred EeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHH-HHhHHhH
Q 045750 508 RLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGV-ERGRVTF 585 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i-~~gR~~~ 585 (792)
|++|.||+.+|+..++..+..+++||||.||++|++.|||||+++ .+..+|..+||+-+. .|.-+.+++ .|||+.|
T Consensus 776 R~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y 853 (1151)
T KOG0206|consen 776 RVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSY 853 (1151)
T ss_pred cCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeH
Confidence 999999999999998776689999999999999999999999996 677788899999884 477777766 8999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHHHHHHHHHHh-hhhhhhcc---cCCCCccccCCCCCCCCCCc
Q 045750 586 GNTMKYIKMSIIANLGGVLSLLIATMFLQT---DPLTPKQLLTQNFLY-SVGQIAIP---WDKMEGDYVKTPQIWSENGL 658 (792)
Q Consensus 586 ~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~-~~~~~~~~---~~~~~~~~m~~p~~~~~~~l 658 (792)
.|+.+++.|.++.|+...+..+...++.++ ..+.+.++.+.|++. .+|.+.++ .|.++...|+.|..|+.+..
T Consensus 854 ~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~ 933 (1151)
T KOG0206|consen 854 IRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQL 933 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhh
Confidence 999999999999999888888877776655 345667776666554 48887776 46667778899998875321
Q ss_pred ---c--h---hhhhhhhHHHHHHHHHHHHHHHHhhh----cccc--hHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q 045750 659 ---P--M---FILFNGPVCILCDVTALFFLWFYYEA----YNQM--NVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE 724 (792)
Q Consensus 659 ---~--~---~~~~~g~~~a~~~~~~~~~~~~~~~~----~~~~--~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~~ 724 (792)
+ + .+...|+++++ ..|++.+..+.. .++. +...+.+..|..+++...+.+ ...+..|.|
T Consensus 934 ~~~f~~~~f~~~~~~g~~~sl---i~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~i-aL~~~ywT~--- 1006 (1151)
T KOG0206|consen 934 NLLFNWKRFWGWMLDGFYQSL---VIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKI-ALETSYWTW--- 1006 (1151)
T ss_pred ccccchHHHHHHHHHHHHhhe---eeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeee-eeeehheeH---
Confidence 1 2 22222333332 222222222211 1111 222233333333333333321 122223322
Q ss_pred cchHHHHHHHHHHHHHHHHhhh--cc-------ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 725 VASWPVLSSTLVISAIGIAIPF--TA-------IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 725 ~~n~~l~~~~~~~~~l~~~~~~--~p-------l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
.|+..+|++++...+.+++.. .| ...++...-..+.+|+.+++.++++++++-.+|.+.+..
T Consensus 1007 -i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~ 1077 (1151)
T KOG0206|consen 1007 -INHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTF 1077 (1151)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhh
Confidence 344444444433322222221 12 112222333567789999999999999998887765543
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-74 Score=651.67 Aligned_cols=499 Identities=27% Similarity=0.350 Sum_probs=425.3
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCC-eEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSE-LIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g-~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
+++++++..++.++++|+++.++++.+..|++++|+| +| ++++|++++|+|||+|.+++||+|||||++++|
T Consensus 25 ~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r-------~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g 97 (556)
T TIGR01525 25 LFLFLLGETLEERAKGRASDALSALLALAPSTARVLQ-------GDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISG 97 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-------CCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEec
Confidence 3566778888999999999999999999999999999 74 999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC-CCCCChHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDFE 159 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~-~~~~~~~~ 159 (792)
+. .||||++||||.|+.|.+| +.+|+||.+.+|+++++|++||.+|++|++.+.+.+ ..++++++
T Consensus 98 ~~-~vdes~lTGEs~pv~k~~g-------------~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~ 163 (556)
T TIGR01525 98 ES-EVDESALTGESMPVEKKEG-------------DEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQ 163 (556)
T ss_pred ce-EEeehhccCCCCCEecCCc-------------CEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHH
Confidence 85 9999999999999999988 459999999999999999999999999999988765 33567799
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIR 239 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e 239 (792)
+.+++++.+++++.++++++.+++++..... ..+..++++++++|||+|++++++++..+..+++|+|+++|+++++|
T Consensus 164 ~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le 241 (556)
T TIGR01525 164 RLADRIASYYVPAVLAIALLTFVVWLALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALE 241 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHH
Confidence 9999999988888888888877776654433 78999999999999999999999999999999999999999999999
Q ss_pred cccceeEEEeccccccccCceEEEEeeCCCCCC--cHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEe
Q 045750 240 DMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFP--KENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKL 317 (792)
Q Consensus 240 ~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~ 317 (792)
++|++|++|||||||||+|+|++.++.+..+.+ .++++.++ +..+..+.||++.|+++++++.+..... .+ ..
T Consensus 242 ~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a---~~~e~~~~hp~~~Ai~~~~~~~~~~~~~-~~-~~ 316 (556)
T TIGR01525 242 KLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALA---AALEQSSSHPLARAIVRYAKKRGLELPK-QE-DV 316 (556)
T ss_pred HhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHH---HHHhccCCChHHHHHHHHHHhcCCCccc-cc-Ce
Confidence 999999999999999999999999987766554 66777765 3446678999999999999876654311 10 11
Q ss_pred EEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhcc
Q 045750 318 DEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEG 397 (792)
Q Consensus 318 ~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 397 (792)
.+++ .++....++ +...+..|+++.+ + . ++.. ...+....+.++.+|
T Consensus 317 ~~~~----~~gi~~~~~-------------g~~~~~lg~~~~~-~-~-------~~~~-------~~~~~~~~~~~~~~g 363 (556)
T TIGR01525 317 EEVP----GKGVEATVD-------------GQEEVRIGNPRLL-E-L-------AAEP-------ISASPDLLNEGESQG 363 (556)
T ss_pred eEec----CCeEEEEEC-------------CeeEEEEecHHHH-h-h-------cCCC-------chhhHHHHHHHhhCC
Confidence 2221 122222221 1124556766554 1 1 1100 011223445678899
Q ss_pred CeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhC
Q 045750 398 LRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKG-VKAKLLTGDSLSLAIKICHEVG 476 (792)
Q Consensus 398 ~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~G-i~v~~~Tgd~~~~a~~ia~~~g 476 (792)
+++++++. |.+++|.+.++|++||+++++|++|+++| ++++|+|||+..++..+++++|
T Consensus 364 ~~~~~v~~--------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lg 423 (556)
T TIGR01525 364 KTVVFVAV--------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELG 423 (556)
T ss_pred cEEEEEEE--------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhC
Confidence 99999985 34899999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcH
Q 045750 477 IRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGAS 556 (792)
Q Consensus 477 i~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~ 556 (792)
++. +|++..|++|.++++.+++.+ +.|+|+|||.||++|+++||+|+++|++++
T Consensus 424 i~~-------------------------~f~~~~p~~K~~~v~~l~~~~-~~v~~vGDg~nD~~al~~A~vgia~g~~~~ 477 (556)
T TIGR01525 424 IDE-------------------------VHAELLPEDKLAIVKELQEEG-GVVAMVGDGINDAPALAAADVGIAMGAGSD 477 (556)
T ss_pred CCe-------------------------eeccCCHHHHHHHHHHHHHcC-CEEEEEECChhHHHHHhhCCEeEEeCCCCH
Confidence 964 889999999999999999988 899999999999999999999999999999
Q ss_pred HHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHH
Q 045750 557 VAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLL 607 (792)
Q Consensus 557 ~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~ 607 (792)
.+++.||+++.++++..+.++++.||+++.|+++++.|.+.+|+..+...+
T Consensus 478 ~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 478 VAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988765544
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-73 Score=638.92 Aligned_cols=479 Identities=24% Similarity=0.328 Sum_probs=409.6
Q ss_pred hHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEEEec
Q 045750 9 VCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQS 88 (792)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~Vdes 88 (792)
-.++.+.++|+++.+++|.++.|++++++|+ +|++++|+.++|+|||+|.+++||+|||||+|++|+. .||||
T Consensus 68 ~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~------~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes 140 (562)
T TIGR01511 68 RWLEMLAKGRASDALSKLAKLQPSTATLLTK------DGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDES 140 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEEEC------CCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehH
Confidence 3444455557778888899999999999983 5778999999999999999999999999999999986 99999
Q ss_pred cccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHHHHHHHH
Q 045750 89 SLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKGVRRISF 167 (792)
Q Consensus 89 ~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 167 (792)
.|||||.|+.|++|+. +|+||.+.+|.++++|+++|.+|.++++.+.+++. .+++++++..++++.
T Consensus 141 ~lTGEs~pv~k~~gd~-------------V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~ 207 (562)
T TIGR01511 141 LVTGESLPVPKKVGDP-------------VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAG 207 (562)
T ss_pred hhcCCCCcEEcCCCCE-------------EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 9999999999999854 99999999999999999999999999999888653 345679999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcccceeEE
Q 045750 168 VLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMDIL 247 (792)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg~v~~i 247 (792)
++++++++++++.+++|. ..+.+++++++++|||+|++++|+++..+..+++|+|+++|+++++|+|+++|++
T Consensus 208 ~~~~~v~~~a~~~~~~~~-------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i 280 (562)
T TIGR01511 208 YFVPVVIAIALITFVIWL-------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTV 280 (562)
T ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEE
Confidence 988888877777665542 5889999999999999999999999999999999999999999999999999999
Q ss_pred EeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCCCCCCC
Q 045750 248 CIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRR 327 (792)
Q Consensus 248 ~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~~~~k 327 (792)
|||||||||+|+|++.++.+.++.++++++.++ +..+..+.||+++|+++++++.+.... .....+++| .+
T Consensus 281 ~fDKTGTLT~g~~~v~~i~~~~~~~~~~~l~~a---a~~e~~s~HPia~Ai~~~~~~~~~~~~--~~~~~~~~~----g~ 351 (562)
T TIGR01511 281 VFDKTGTLTQGKPTVTDVHVFGDRDRTELLALA---AALEAGSEHPLAKAIVSYAKEKGITLV--EVSDFKAIP----GI 351 (562)
T ss_pred EECCCCCCcCCCEEEEEEecCCCCCHHHHHHHH---HHHhccCCChHHHHHHHHHHhcCCCcC--CCCCeEEEC----Cc
Confidence 999999999999999999877777777888776 445678899999999999987664321 122222332 23
Q ss_pred eEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEe
Q 045750 328 KVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKR 407 (792)
Q Consensus 328 ~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~ 407 (792)
.+...++ + ..+..|+++.+.+... ..+ ++.++|.+++.++.
T Consensus 352 Gi~~~~~-------------g-~~~~iG~~~~~~~~~~-----------~~~------------~~~~~g~~~~~~~~-- 392 (562)
T TIGR01511 352 GVEGTVE-------------G-TKIQLGNEKLLGENAI-----------KID------------GKAEQGSTSVLVAV-- 392 (562)
T ss_pred eEEEEEC-------------C-EEEEEECHHHHHhCCC-----------CCC------------hhhhCCCEEEEEEE--
Confidence 3333332 1 2356788877543111 011 12367888887764
Q ss_pred cCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchh
Q 045750 408 LLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPD 487 (792)
Q Consensus 408 ~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~ 487 (792)
|.+++|.+.++|++||+++++|++|++.|++++|+|||+...+..+++++|++
T Consensus 393 ------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--------- 445 (562)
T TIGR01511 393 ------------------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--------- 445 (562)
T ss_pred ------------------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---------
Confidence 45899999999999999999999999999999999999999999999999994
Q ss_pred hhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEec
Q 045750 488 LELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILL 567 (792)
Q Consensus 488 ~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~ 567 (792)
+|++..|++|.++++.+++.+ +.|+|+|||.||++|+++||+||+||++++.+++.||+++.
T Consensus 446 -----------------~~~~~~p~~K~~~v~~l~~~~-~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 446 -----------------VRAEVLPDDKAALIKELQEKG-RVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLM 507 (562)
T ss_pred -----------------EEccCChHHHHHHHHHHHHcC-CEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEe
Confidence 678889999999999999988 89999999999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHH
Q 045750 568 EKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLL 607 (792)
Q Consensus 568 ~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~ 607 (792)
++++..+.++++.||++++++++++.|.+.+|+..+...+
T Consensus 508 ~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 508 RNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987654443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-74 Score=630.11 Aligned_cols=496 Identities=23% Similarity=0.294 Sum_probs=420.5
Q ss_pred hHHHHHHHH---hHHHHHHHHhccCCCCeEEEecCCccccCCe-EEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeE
Q 045750 9 VCLRFYQEY---GSSKAAMKLSEFVRCPIKVQRCAGRVVQSEL-IVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLV 84 (792)
Q Consensus 9 ~~~~~~~~~---~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~-~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~ 84 (792)
.+.+++|.. |+..++.+|.++.|.++.+.. +|+ +.+|+.+.+++||+|.+.||++||+||+|++|++ +
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~-------~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~ 423 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIE-------DGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-E 423 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEee-------cCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-e
Confidence 344555544 455677788888899999998 664 8899999999999999999999999999999997 9
Q ss_pred EEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHHHHH
Q 045750 85 VSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEKGVR 163 (792)
Q Consensus 85 Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~~~~ 163 (792)
||||.+|||+.|+.|++|+. |.+||.+.+|.....++++|.+|.++++.+..++.+ .+.++|+..+
T Consensus 424 VDEs~iTGEs~PV~Kk~gs~-------------ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aD 490 (951)
T KOG0207|consen 424 VDESLITGESMPVPKKKGST-------------VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLAD 490 (951)
T ss_pred echhhccCCceecccCCCCe-------------eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHH
Confidence 99999999999999999954 999999999999999999999999999999987644 4567999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccc-----------cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCcc
Q 045750 164 RISFVLICVMLIVATIIILIDYFTS-----------KNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVV 232 (792)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v 232 (792)
+++.+++++++++++..+.+|.+.+ ..+..++..++++++++|||+|.++.|++...+....+++|+++
T Consensus 491 kia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLI 570 (951)
T KOG0207|consen 491 KIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLI 570 (951)
T ss_pred HhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEE
Confidence 9999999998888888877776543 24556788889999999999999999999999999999999999
Q ss_pred ccchhhhcccceeEEEeccccccccCceEEEEeeCCCC-CCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCccccc
Q 045750 233 KSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWG-FPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQA 311 (792)
Q Consensus 233 k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~ 311 (792)
|..+.+|.+.++++++||||||||+|++.+.++....+ .+..+.+.++ +..|..++||+.+|+++|+++.......
T Consensus 571 KGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v---~a~Es~SeHPig~AIv~yak~~~~~~~~ 647 (951)
T KOG0207|consen 571 KGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALV---AAMESGSEHPIGKAIVDYAKEKLVEPNP 647 (951)
T ss_pred cCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHH---HHHhcCCcCchHHHHHHHHHhcccccCc
Confidence 99999999999999999999999999999999866555 5666777665 5568899999999999999876522211
Q ss_pred ccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHH
Q 045750 312 SKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGE 391 (792)
Q Consensus 312 ~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (792)
........+| -+.....+.+.. . ...-|+-+.+.+.-... .+++++..+
T Consensus 648 ~~~~~~~~~p--g~g~~~~~~~~~------------~--~i~iGN~~~~~r~~~~~---------------~~~i~~~~~ 696 (951)
T KOG0207|consen 648 EGVLSFEYFP--GEGIYVTVTVDG------------N--EVLIGNKEWMSRNGCSI---------------PDDILDALT 696 (951)
T ss_pred cccceeeccc--CCCcccceEEee------------e--EEeechHHHHHhcCCCC---------------chhHHHhhh
Confidence 1111222222 122222222211 1 25668777665422111 123666677
Q ss_pred HHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 045750 392 ELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKI 471 (792)
Q Consensus 392 ~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~i 471 (792)
+....|+.+.+++.. .++.|++.++|++|||+..+|+.||+.|++++|+|||+..+|.++
T Consensus 697 ~~e~~g~tvv~v~vn--------------------~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~sv 756 (951)
T KOG0207|consen 697 ESERKGQTVVYVAVN--------------------GQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSV 756 (951)
T ss_pred hHhhcCceEEEEEEC--------------------CEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHH
Confidence 788899999999874 399999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 472 CHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 472 a~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
|+++|++. |+++..|+||.+.++.+|+.+ ..|+|+|||.||+|+|.+||+||+|
T Consensus 757 A~~VGi~~-------------------------V~aev~P~~K~~~Ik~lq~~~-~~VaMVGDGINDaPALA~AdVGIai 810 (951)
T KOG0207|consen 757 AQQVGIDN-------------------------VYAEVLPEQKAEKIKEIQKNG-GPVAMVGDGINDAPALAQADVGIAI 810 (951)
T ss_pred HHhhCcce-------------------------EEeccCchhhHHHHHHHHhcC-CcEEEEeCCCCccHHHHhhccceee
Confidence 99999875 999999999999999999998 8999999999999999999999999
Q ss_pred cCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHH
Q 045750 552 DSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLS 605 (792)
Q Consensus 552 ~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~ 605 (792)
+.+++.+.++||+|+++||+..++.+|..+|++..|++.|+.|+++||+..+-.
T Consensus 811 g~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpI 864 (951)
T KOG0207|consen 811 GAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPI 864 (951)
T ss_pred ccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999999999865433
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-72 Score=629.78 Aligned_cols=480 Identities=26% Similarity=0.360 Sum_probs=413.3
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
++++++..++.++++|+++.++++.++.|++++|+| ||+++++++++|+|||+|.+++||+|||||++++|+.
T Consensus 26 ~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r-------~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~~ 98 (536)
T TIGR01512 26 LLFSIGETLEEYASGRARRALKALMELAPDTARVLR-------GGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTS 98 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-------CCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCcE
Confidence 456678889999999999999999999999999999 9999999999999999999999999999999999975
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKG 161 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~ 161 (792)
.||||+|||||.|+.|.+|+ .+|+||.+.+|+++++|++||.+|.+|++.+.+++. .+++++++.
T Consensus 99 -~vdes~lTGEs~pv~k~~g~-------------~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~ 164 (536)
T TIGR01512 99 -TVDESALTGESVPVEKAPGD-------------EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRF 164 (536)
T ss_pred -EEEecccCCCCCcEEeCCCC-------------EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHH
Confidence 99999999999999999884 499999999999999999999999999999888653 356789999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcc
Q 045750 162 VRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241 (792)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~l 241 (792)
+++++.+++++.++++++.++++++... +...+.+++++++++|||+|++++++++..+..+++|+|+++|+++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l 243 (536)
T TIGR01512 165 IDRFARYYTPVVLAIALAIWLVPGLLKR-WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEAL 243 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhh
Confidence 9999998888888877777776654433 344888899999999999999999999999999999999999999999999
Q ss_pred cceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeC
Q 045750 242 GTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIP 321 (792)
Q Consensus 242 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~ 321 (792)
|++|++|||||||||+|+|++.++.+ .+++..+. ..+..+.||+++|+++++++.+ .+....++|
T Consensus 244 ~~v~~i~fDKTGTLT~~~~~v~~~~~------~~~l~~a~---~~e~~~~hp~~~Ai~~~~~~~~------~~~~~~~~~ 308 (536)
T TIGR01512 244 AKIKTVAFDKTGTLTTGRPKVVDVVP------AEVLRLAA---AAEQASSHPLARAIVDYARKRE------NVESVEEVP 308 (536)
T ss_pred cCCCEEEECCCCCCcCCceEEEEeeH------HHHHHHHH---HHhccCCCcHHHHHHHHHHhcC------CCcceEEec
Confidence 99999999999999999999999864 25666663 4567889999999999997653 222233333
Q ss_pred CCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeE
Q 045750 322 FDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVI 401 (792)
Q Consensus 322 f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl 401 (792)
.+.+...++ + . .+..|+++.+.+.. . ..+..+|.+++
T Consensus 309 ----g~gi~~~~~-----g-------~--~~~ig~~~~~~~~~---------~----------------~~~~~~~~~~~ 345 (536)
T TIGR01512 309 ----GEGVRAVVD-----G-------G--EVRIGNPRSLEAAV---------G----------------ARPESAGKTIV 345 (536)
T ss_pred ----CCeEEEEEC-----C-------e--EEEEcCHHHHhhcC---------C----------------cchhhCCCeEE
Confidence 122222221 1 2 23457765543210 0 03445677776
Q ss_pred EEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 402 GVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGV-KAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 402 ~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi-~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
.++. |..+.|.+.++|++||+++++|++|+++|+ +++++|||+..++..+++++|++.
T Consensus 346 ~v~~--------------------~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~- 404 (536)
T TIGR01512 346 HVAR--------------------DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE- 404 (536)
T ss_pred EEEE--------------------CCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-
Confidence 6653 458999999999999999999999999999 999999999999999999999964
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHH
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAK 559 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~ 559 (792)
+|++..|++|.++++.+++.+ +.|+|+|||.||++|+++||+|+++| ++++.++
T Consensus 405 ------------------------~f~~~~p~~K~~~i~~l~~~~-~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~ 459 (536)
T TIGR01512 405 ------------------------VHAELLPEDKLEIVKELREKY-GPVAMVGDGINDAPALAAADVGIAMGASGSDVAI 459 (536)
T ss_pred ------------------------hhhccCcHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHH
Confidence 788899999999999999998 89999999999999999999999999 8999999
Q ss_pred hhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHH
Q 045750 560 DLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLI 608 (792)
Q Consensus 560 ~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~ 608 (792)
+.||+++.++++..+.+++..||+++.++++++.|.+.+|+..+.+.++
T Consensus 460 ~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 460 ETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999876665543
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-71 Score=657.20 Aligned_cols=489 Identities=26% Similarity=0.289 Sum_probs=416.4
Q ss_pred hHHHHHHH---HhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEE
Q 045750 9 VCLRFYQE---YGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVV 85 (792)
Q Consensus 9 ~~~~~~~~---~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~V 85 (792)
.+.+++|+ .|+.+++++|.++.|++++++| +|++++|+.++|+|||+|.+++||+||+||+|++|+ ..|
T Consensus 297 ~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~-------~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~v 368 (834)
T PRK10671 297 NLGHMLEARARQRSSKALEKLLDLTPPTARVVT-------DEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-AWL 368 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe-------CCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-EEE
Confidence 33445554 4666777888899999999999 888999999999999999999999999999999997 499
Q ss_pred EeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHHHHH
Q 045750 86 SQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKGVRR 164 (792)
Q Consensus 86 des~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~~~~ 164 (792)
|||+|||||.|+.|.+|+. +|+||.+.+|.+.+.|+++|.+|.++++.+.+++. ..++++++..++
T Consensus 369 deS~lTGEs~pv~k~~gd~-------------V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~ 435 (834)
T PRK10671 369 DEAMLTGEPIPQQKGEGDS-------------VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADK 435 (834)
T ss_pred eehhhcCCCCCEecCCCCE-------------EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHH
Confidence 9999999999999999954 99999999999999999999999999999888753 345679999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccc--chhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhccc
Q 045750 165 ISFVLICVMLIVATIIILIDYFTSK--NLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMG 242 (792)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg 242 (792)
++.++++++++++++.+++|++.+. .|...+.+++++++++|||+|++++|+++..+..+++|+|+++|+.+++|+++
T Consensus 436 ~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~ 515 (834)
T PRK10671 436 ISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRAS 515 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhc
Confidence 9999888888888777776655433 26678889999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCC
Q 045750 243 TMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPF 322 (792)
Q Consensus 243 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f 322 (792)
++|++|||||||||+|+|++.++....+.++++++.++ ...+..+.||+++|+++++..... ........+|
T Consensus 516 ~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a---~~~e~~s~hp~a~Ai~~~~~~~~~----~~~~~~~~~~- 587 (834)
T PRK10671 516 TLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALRLA---AALEQGSSHPLARAILDKAGDMTL----PQVNGFRTLR- 587 (834)
T ss_pred CCCEEEEcCCCccccCceEEEEEEccCCCCHHHHHHHH---HHHhCCCCCHHHHHHHHHHhhCCC----CCcccceEec-
Confidence 99999999999999999999998877777777777776 345678899999999998853221 1111111111
Q ss_pred CCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEE
Q 045750 323 DFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIG 402 (792)
Q Consensus 323 ~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~ 402 (792)
.+.+...+ ++ ..+.+|+++.+.+... . .+.+.+..+++.++|.+++.
T Consensus 588 ---g~Gv~~~~-----~g---------~~~~~G~~~~~~~~~~-------------~---~~~~~~~~~~~~~~g~~~v~ 634 (834)
T PRK10671 588 ---GLGVSGEA-----EG---------HALLLGNQALLNEQQV-------------D---TKALEAEITAQASQGATPVL 634 (834)
T ss_pred ---ceEEEEEE-----CC---------EEEEEeCHHHHHHcCC-------------C---hHHHHHHHHHHHhCCCeEEE
Confidence 12222221 11 2356799887643211 1 12344455677889999999
Q ss_pred EEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc
Q 045750 403 VAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV 482 (792)
Q Consensus 403 ~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~ 482 (792)
++++ ..++|++.++|++||+++++|++|++.|++++|+|||+..++..+++++|++.
T Consensus 635 va~~--------------------~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--- 691 (834)
T PRK10671 635 LAVD--------------------GKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--- 691 (834)
T ss_pred EEEC--------------------CEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---
Confidence 9863 37999999999999999999999999999999999999999999999999974
Q ss_pred ccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhc
Q 045750 483 STGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLA 562 (792)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~a 562 (792)
++++..|++|.++++.++.++ +.|+|+|||.||++|+++||+||+||++++.++++|
T Consensus 692 ----------------------~~~~~~p~~K~~~i~~l~~~~-~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~a 748 (834)
T PRK10671 692 ----------------------VIAGVLPDGKAEAIKRLQSQG-RQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETA 748 (834)
T ss_pred ----------------------EEeCCCHHHHHHHHHHHhhcC-CEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhC
Confidence 889999999999999999998 899999999999999999999999999999999999
Q ss_pred CEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHH
Q 045750 563 DIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLS 605 (792)
Q Consensus 563 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~ 605 (792)
|+++.++++.+|.++++.||+++.++++|+.|.+.+|+..+..
T Consensus 749 d~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~ 791 (834)
T PRK10671 749 AITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPI 791 (834)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999866543
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-60 Score=486.24 Aligned_cols=507 Identities=23% Similarity=0.279 Sum_probs=406.5
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCC-CCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVR-CPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+.+++..+-+.+-|-|.+-..+.|++... ..++.++. +|.++.+++.+|+.||+|.+.+||.||+||.+++|.
T Consensus 74 fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~------~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~ 147 (681)
T COG2216 74 FTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRA------DGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGV 147 (681)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcC------CCCeeeccccccccCCEEEEecCCCccCCCeEEeee
Confidence 34455666677777776665666665532 34455552 689999999999999999999999999999999998
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEK 160 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~ 160 (792)
. +||||++||||.|+.|.+|-.. +-+-.||++++.+.+..++....+|++.++....+..+ +++|-+.
T Consensus 148 a-sVdESAITGESaPViresGgD~----------ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEI 216 (681)
T COG2216 148 A-SVDESAITGESAPVIRESGGDF----------SSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEI 216 (681)
T ss_pred e-ecchhhccCCCcceeeccCCCc----------ccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHH
Confidence 7 9999999999999999998432 23889999999999999999999999999998887432 2333344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.++.+..-+..+.++.....+-+..+.+ .-.-.+...++++++++|-...-.++..-..|+.|+.+.|++.++..++|.
T Consensus 217 AL~iLL~~LTliFL~~~~Tl~p~a~y~~-g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEa 295 (681)
T COG2216 217 ALTILLSGLTLIFLLAVATLYPFAIYSG-GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEA 295 (681)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHcC-CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhh
Confidence 3443332222222221111111111111 111345566788899999998888888778899999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccce-EeEE
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWK-KLDE 319 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~-~~~~ 319 (792)
.|.+|++..|||||+|.|+-.-.++++.++.+.+++.+.|.+++.. ...|..+.|++.+++.+......... ....
T Consensus 296 aGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~---DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~f 372 (681)
T COG2216 296 AGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLA---DETPEGRSIVELAKKLGIELREDDLQSHAEF 372 (681)
T ss_pred cCCccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhc---cCCCCcccHHHHHHHhccCCCccccccccee
Confidence 9999999999999999999999999999999999999998776543 45688899999999988776555544 3678
Q ss_pred eCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCe
Q 045750 320 IPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLR 399 (792)
Q Consensus 320 ~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r 399 (792)
+||+.+.+++.+-... ...+-||+.+.+.++-+.. +|. ..++++...++.++.|=.
T Consensus 373 vpFtA~TRmSGvd~~~-------------~~~irKGA~dai~~~v~~~----~g~-------~p~~l~~~~~~vs~~GGT 428 (681)
T COG2216 373 VPFTAQTRMSGVDLPG-------------GREIRKGAVDAIRRYVRER----GGH-------IPEDLDAAVDEVSRLGGT 428 (681)
T ss_pred eecceecccccccCCC-------------CceeecccHHHHHHHHHhc----CCC-------CCHHHHHHHHHHHhcCCC
Confidence 9999998887775432 2467799999999876622 121 124456667888899999
Q ss_pred eEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 400 VIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 400 vl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
.++++. |..++|.+.++|-++|+.+|-+.+||+.|||.+|+||||+.||..+|++.|+++
T Consensus 429 PL~V~~--------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd 488 (681)
T COG2216 429 PLVVVE--------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD 488 (681)
T ss_pred ceEEEE--------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh
Confidence 998875 348999999999999999999999999999999999999999999999999986
Q ss_pred CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH
Q 045750 480 THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAK 559 (792)
Q Consensus 480 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~ 559 (792)
..++++|++|.+.++.-|..| +.|+|+|||.||+|+|.+||||+||.+|++.+|
T Consensus 489 -------------------------fiAeatPEdK~~~I~~eQ~~g-rlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAk 542 (681)
T COG2216 489 -------------------------FIAEATPEDKLALIRQEQAEG-RLVAMTGDGTNDAPALAQADVGVAMNSGTQAAK 542 (681)
T ss_pred -------------------------hhhcCChHHHHHHHHHHHhcC-cEEEEcCCCCCcchhhhhcchhhhhccccHHHH
Confidence 779999999999999999999 999999999999999999999999999999999
Q ss_pred hhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHH
Q 045750 560 DLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANL 600 (792)
Q Consensus 560 ~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~ 600 (792)
+++..|=+|+|...+.+.++.|+++.-.=-..-.|++..-+
T Consensus 543 EAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDv 583 (681)
T COG2216 543 EAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDV 583 (681)
T ss_pred HhhcccccCCCccceehHhhhhhhheeecccceeeehhhHH
Confidence 99999999999999999999999876443333345554443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=301.79 Aligned_cols=224 Identities=35% Similarity=0.531 Sum_probs=199.3
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCC-eEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCP-IKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
+++++++..+++++++|+++..+++++..+++ ++|.| ||++++++++||+|||+|.+++||++||||++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r-------~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~ 75 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIR-------DGRWQKIPSSELVPGDIIILKAGDIVPADGILLES 75 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEE-------TTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEES
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEe-------ccccccchHhhccceeeeecccccccccCccceec
Confidence 45678899999999999999999999988887 89999 99999999999999999999999999999999994
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFE 159 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~ 159 (792)
+.+.||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|+++++|++||.+|+.+++.+.....+ ++++++
T Consensus 76 g~~~vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~ 147 (230)
T PF00122_consen 76 GSAYVDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLE 147 (230)
T ss_dssp SEEEEECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHH
T ss_pred cccccccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccccccchhhh
Confidence 4579999999999999999853 3455699999999999999999999999999999999886654 458899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcc--cccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYF--TSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGA 237 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~ 237 (792)
+.++++..++++++++++++.++++++ ...+|...+..++++++.++|++||+++++++..++.+++++|+++|++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a 227 (230)
T PF00122_consen 148 RKLNKIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSA 227 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTH
T ss_pred hhhHHHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCccc
Confidence 999999999888888888777777666 667899999999999999999999999999999999999999999999999
Q ss_pred hhc
Q 045750 238 IRD 240 (792)
Q Consensus 238 ~e~ 240 (792)
+|+
T Consensus 228 ~E~ 230 (230)
T PF00122_consen 228 LEA 230 (230)
T ss_dssp HHH
T ss_pred ccC
Confidence 984
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=229.22 Aligned_cols=431 Identities=15% Similarity=0.156 Sum_probs=270.4
Q ss_pred CChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecC-----------------CCcc----
Q 045750 355 GALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLL-----------------PQKS---- 413 (792)
Q Consensus 355 G~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~-----------------~~~~---- 413 (792)
|-.+.+.+.|+.+ |++-+..|++..+++++.+.+..-...| .++++|||+.. ++..
T Consensus 698 g~ad~~~eACTdf--WdGadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T 774 (1354)
T KOG4383|consen 698 GFADFFEEACTDF--WDGADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIET 774 (1354)
T ss_pred cHHHHHHHHhhhh--cCCceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhh
Confidence 6678889999999 6888899999999999999998888888 57899999641 0000
Q ss_pred ----------------ccCCCC-----------CCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHH
Q 045750 414 ----------------AQSNRN-----------DGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLS 466 (792)
Q Consensus 414 ----------------~~~~~~-----------~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~ 466 (792)
..++.+ .++.-.+..|.|++..+.+.+++....|+.|.++.||++.+|-+++.
T Consensus 775 ~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdEL 854 (1354)
T KOG4383|consen 775 ACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDEL 854 (1354)
T ss_pred hccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHH
Confidence 000000 01223456899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCC----------ccccch----------------------------hhhcc-----------------
Q 045750 467 LAIKICHEVGIRTT----------HVSTGP----------------------------DLELL----------------- 491 (792)
Q Consensus 467 ~a~~ia~~~gi~~~----------~~~~g~----------------------------~~~~~----------------- 491 (792)
..+-+|.++||..+ .-..|. +...+
T Consensus 855 kSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds 934 (1354)
T KOG4383|consen 855 KSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS 934 (1354)
T ss_pred HHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc
Confidence 99999999999210 000000 00000
Q ss_pred -----------------------CHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccH--HHHHhCC
Q 045750 492 -----------------------SQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDS--LALDAAN 546 (792)
Q Consensus 492 -----------------------~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~--~~l~~A~ 546 (792)
+.++++++..-+-.|.+++|+...++++.+|++| ++++.+|...|-- -.+-+||
T Consensus 935 di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~G-EVtcclGS~aN~rNSciflkad 1013 (1354)
T KOG4383|consen 935 DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENG-EVTCCLGSCANARNSCIFLKAD 1013 (1354)
T ss_pred chhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcC-cEEEEeccccccccceEEEccc
Confidence 0112222233456899999999999999999999 9999999998843 3457899
Q ss_pred eeEEecC-------------CcHH-HHh-----------------hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHH
Q 045750 547 VGISVDS-------------GASV-AKD-----------------LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMS 595 (792)
Q Consensus 547 vgia~~~-------------~~~~-~~~-----------------~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 595 (792)
++||+.. ++.. ..+ ++|+.+.....-.+..+|+.+|+....+|+++.|.
T Consensus 1014 ISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFi 1093 (1354)
T KOG4383|consen 1014 ISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFI 1093 (1354)
T ss_pred eeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 9999831 0100 111 23444444445567889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhh-cccCCCCccccCC--CCC-------CCCCCcchhhhh
Q 045750 596 IIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIA-IPWDKMEGDYVKT--PQI-------WSENGLPMFILF 664 (792)
Q Consensus 596 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~-~~~~~~~~~~m~~--p~~-------~~~~~l~~~~~~ 664 (792)
+.+.+...+..+++.+++.|+.|+..+++|..++-. +..++ +...++.+.+|.+ |.. -+.+.+..+++-
T Consensus 1094 Lq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFilk 1173 (1354)
T KOG4383|consen 1094 LQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFILK 1173 (1354)
T ss_pred HHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHHH
Confidence 999998888888888888888899999999988754 55555 3333444444432 221 112223333332
Q ss_pred hhhHHHHHHHHHHHHHHHHhhh---------------c--ccch----------HHHHHHHHHHHHHHHHHHHHH--HHh
Q 045750 665 NGPVCILCDVTALFFLWFYYEA---------------Y--NQMN----------VVFFRSAWFVEGLLMQTLIIH--LIR 715 (792)
Q Consensus 665 ~g~~~a~~~~~~~~~~~~~~~~---------------~--~~~~----------~~~~~t~~f~~lv~~q~~~~~--~~r 715 (792)
..+ .+...+..|.+.+..+.. . ++.. ...+|-..-..+++..++... ..+
T Consensus 1174 Fsl-s~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL~saQkl~aa~iilH~ifiqIThih~ 1252 (1354)
T KOG4383|consen 1174 FSL-SASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANGLGSAQKLLAAEIILHIIFIQITHIHC 1252 (1354)
T ss_pred hhh-hHHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhhhhhHHHHHHHHHHHHhheeEEEEEEE
Confidence 222 222222223222221110 0 0000 111121111122222222111 122
Q ss_pred cCCcccccccchHHH-------HHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 716 TEKIPFIQEVASWPV-------LSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 716 ~~~~~~~~~~~n~~l-------~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
+...+|.++..|.|| .+..++..++...+-+-- -+.-||....|..-|++..++...+.+.+|++|...+|.
T Consensus 1253 tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiKiheIR~ 1332 (1354)
T KOG4383|consen 1253 TKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIKIHEIRQ 1332 (1354)
T ss_pred ecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHHHHHHHH
Confidence 333333334334333 233333333333332222 334478888888889998888888889999999887776
Q ss_pred hcc
Q 045750 788 YKK 790 (792)
Q Consensus 788 ~~~ 790 (792)
|.|
T Consensus 1333 ~~R 1335 (1354)
T KOG4383|consen 1333 FTR 1335 (1354)
T ss_pred HHH
Confidence 543
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-24 Score=213.47 Aligned_cols=211 Identities=33% Similarity=0.477 Sum_probs=152.3
Q ss_pred eeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCCC
Q 045750 244 MDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFD 323 (792)
Q Consensus 244 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~ 323 (792)
+++||||||||||++++.+ . . ...+..+..+ ...+..+.||.+.++..++...... ........++
T Consensus 1 i~~i~fDktGTLt~~~~~v--~-~---~~~~~~~~~~---~~~~~~s~~p~~~~~~~~~~~~~~~---~~~~~~~~~~-- 66 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV--A-P---PSNEAALAIA---AALEQGSEHPIGKAIVEFAKNHQWS---KSLESFSEFI-- 66 (215)
T ss_dssp ESEEEEECCTTTBESHHEE--E-S---CSHHHHHHHH---HHHHCTSTSHHHHHHHHHHHHHHHH---SCCEEEEEET--
T ss_pred CeEEEEecCCCcccCeEEE--E-e---ccHHHHHHHH---HHhhhcCCCcchhhhhhhhhhccch---hhhhhheeee--
Confidence 6899999999999999999 1 1 4455555555 4456788999999999998653221 0012222222
Q ss_pred CCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEE
Q 045750 324 FVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGV 403 (792)
Q Consensus 324 ~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~ 403 (792)
.+.....+. .. +. |.++.+.+..... ............+|.+.+.+
T Consensus 67 --~~~~~~~~~-------------~~--~~-g~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~ 112 (215)
T PF00702_consen 67 --GRGISGDVD-------------GI--YL-GSPEWIHELGIRV----------------ISPDLVEEIQESQGRTVIVL 112 (215)
T ss_dssp --TTEEEEEEH-------------CH--EE-HHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHCEEE
T ss_pred --ecccccccc-------------cc--cc-ccchhhhhccccc----------------cccchhhhHHHhhCCcccce
Confidence 111111110 11 22 7776665544321 01111222234556566655
Q ss_pred EEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccc
Q 045750 404 AVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVS 483 (792)
Q Consensus 404 a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~ 483 (792)
+. +..++|.+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||...
T Consensus 113 ~~--------------------~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~--- 169 (215)
T PF00702_consen 113 AV--------------------NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS--- 169 (215)
T ss_dssp EE--------------------SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE---
T ss_pred ee--------------------cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc---
Confidence 53 4589999999999999999999999999999999999999999999999999543
Q ss_pred cchhhhccCHHHHHHhhhcceEEEEe--ChhhH--HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCC
Q 045750 484 TGPDLELLSQESFHERVKRATVLARL--TPTQK--LRVVQSLQSVGKHVVGFLGDGINDSLALDAAN 546 (792)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K--~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~ 546 (792)
.+|++. +|++| .++++.++..+ +.|+|+|||.||++|+++||
T Consensus 170 --------------------~v~a~~~~kP~~k~~~~~i~~l~~~~-~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 --------------------IVFARVIGKPEPKIFLRIIKELQVKP-GEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --------------------EEEESHETTTHHHHHHHHHHHHTCTG-GGEEEEESSGGHHHHHHHSS
T ss_pred --------------------cccccccccccchhHHHHHHHHhcCC-CEEEEEccCHHHHHHHHhCc
Confidence 389999 99999 99999999777 68999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=177.48 Aligned_cols=169 Identities=22% Similarity=0.261 Sum_probs=129.5
Q ss_pred CCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCCCC-----cchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 045750 615 TDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSENG-----LPMFILFNGPVCILCDVTALFFLWFYYEAYN 688 (792)
Q Consensus 615 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~~~-----l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~ 688 (792)
|.|++|.|++|+|+++| +|+++++.|++|+++|++|||.++.. ++......|+.+++.++.+|+......+...
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 56999999999999999 67999999999999999988855432 3344556666666666666655544332222
Q ss_pred cc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--c-cchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChh
Q 045750 689 QM---NVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQ--E-VASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLT 761 (792)
Q Consensus 689 ~~---~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~--~-~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~ 761 (792)
.. +...++|++|.+++++|+++.+.+|+++.+.++ + +.|+.+++++++..+++.++.|+| ++.+|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 11 256799999999999999999999997776655 3 579999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 045750 762 YFGFLLLLFIGYFTVGQLVKRI 783 (792)
Q Consensus 762 ~w~~~l~~~~~~l~~~e~iK~~ 783 (792)
+|+++++.+++.+++.|++|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-15 Score=128.82 Aligned_cols=124 Identities=23% Similarity=0.274 Sum_probs=110.3
Q ss_pred cEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE
Q 045750 427 MVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 427 l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
+...+.++-.-.+=++++++|++|++. +++++.|||...+....|+..|++... +|
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r-----------------------v~ 74 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER-----------------------VF 74 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-----------------------ee
Confidence 367788888899999999999999999 999999999999999999999997654 89
Q ss_pred EEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe-c--CCcHHHHhhcCEEeccCCchHHHHH
Q 045750 507 ARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-D--SGASVAKDLADIILLEKDLNVLVAG 577 (792)
Q Consensus 507 ~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~-~--~~~~~~~~~ad~vl~~~~~~~i~~~ 577 (792)
+...|+.|.++++.|++.+ +.|.|+|||.||.+||+.||+||+. + +.++.+..+||+++. +...++++
T Consensus 75 a~a~~e~K~~ii~eLkk~~-~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 75 AGADPEMKAKIIRELKKRY-EKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred cccCHHHHHHHHHHhcCCC-cEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 9999999999999999988 8999999999999999999999986 3 677888899999983 44444443
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.1e-12 Score=131.10 Aligned_cols=68 Identities=22% Similarity=0.236 Sum_probs=57.9
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|..-++.+.++- .+.|+++|||.||++||+.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 4555555555432 1568999999999999999999999999999999999999999999999998864
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.6e-12 Score=129.41 Aligned_cols=150 Identities=28% Similarity=0.366 Sum_probs=107.5
Q ss_pred EecccCCC-CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-Cccccchhhh---------ccC-------
Q 045750 431 GLITFYDP-PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDLE---------LLS------- 492 (792)
Q Consensus 431 G~i~~~d~-~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~~---------~~~------- 492 (792)
|++.-.+. +.+.++++|++++++|++++++|||+...+..+.+++|+.. -....|..+. .++
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33333443 99999999999999999999999999999999999999942 0001110000 000
Q ss_pred ------------------------------------------------------------HHHHHH---hhh-----cce
Q 045750 493 ------------------------------------------------------------QESFHE---RVK-----RAT 504 (792)
Q Consensus 493 ------------------------------------------------------------~~~~~~---~~~-----~~~ 504 (792)
.+...+ .+. ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 001111 010 111
Q ss_pred EEEE-------eCh--hhHHHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCch
Q 045750 505 VLAR-------LTP--TQKLRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLN 572 (792)
Q Consensus 505 v~~~-------~~p--~~K~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~ 572 (792)
.+.+ ..| .+|...++.+.++ | .+.|+++||+.||.+||+.|+.||||+|+++.+|+.||+++.+++.+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 2222 222 3688888877774 2 14599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 045750 573 VLVAGVER 580 (792)
Q Consensus 573 ~i~~~i~~ 580 (792)
+|.++|++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99999976
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.8e-12 Score=130.28 Aligned_cols=144 Identities=13% Similarity=0.149 Sum_probs=100.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc-ccchhhh----------cc--------------
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV-STGPDLE----------LL-------------- 491 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~-~~g~~~~----------~~-------------- 491 (792)
..+.+.++++|++++++|++++++|||+...+..+.+++|++...+ ..|..+. .+
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 3699999999999999999999999999999999999999831100 0000000 00
Q ss_pred -----------------------------------------------------CHHH---HHHhhh-----cceE-----
Q 045750 492 -----------------------------------------------------SQES---FHERVK-----RATV----- 505 (792)
Q Consensus 492 -----------------------------------------------------~~~~---~~~~~~-----~~~v----- 505 (792)
..+. +.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 0000 000000 0011
Q ss_pred -EEEeCh--hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCE--EeccCCchHHHHH
Q 045750 506 -LARLTP--TQKLRVVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADI--ILLEKDLNVLVAG 577 (792)
Q Consensus 506 -~~~~~p--~~K~~iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~--vl~~~~~~~i~~~ 577 (792)
+...+| ..|..-++.+.++-+ +.|+++|||.||++||+.|+.|+||+|+.+.+|+.||+ |+.+++.++|.++
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHH
Confidence 112222 246666666665421 56899999999999999999999999999999999996 7778899999988
Q ss_pred HHH
Q 045750 578 VER 580 (792)
Q Consensus 578 i~~ 580 (792)
|++
T Consensus 258 l~~ 260 (272)
T PRK15126 258 LTH 260 (272)
T ss_pred HHH
Confidence 854
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-11 Score=125.05 Aligned_cols=143 Identities=20% Similarity=0.234 Sum_probs=103.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc-------ccc---chhhhcc----------------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH-------VST---GPDLELL---------------- 491 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~-------~~~---g~~~~~~---------------- 491 (792)
++.|.+.++|++++++|++++++|||+...+..+++.+|++... +.. ++.+...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 47899999999999999999999999999999999999984211 111 1100000
Q ss_pred -------------------------CHHHHHHhhhc----ceE-----EEEeChh--hHHHHHHHHhhcC---CCEEEEE
Q 045750 492 -------------------------SQESFHERVKR----ATV-----LARLTPT--QKLRVVQSLQSVG---KHVVGFL 532 (792)
Q Consensus 492 -------------------------~~~~~~~~~~~----~~v-----~~~~~p~--~K~~iv~~l~~~~---~~~v~~i 532 (792)
..+++.+.+.+ ..+ +....|. .|...++.+.++- .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00111111110 111 1223332 3777777776542 1568999
Q ss_pred cCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 533 GDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 533 GDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++.+++.++|++
T Consensus 180 GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHH
Confidence 999999999999999999999999999999999999999999998864
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=128.00 Aligned_cols=68 Identities=18% Similarity=0.164 Sum_probs=56.8
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC--EEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLAD--IILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad--~vl~~~~~~~i~~~i~~ 580 (792)
.|..-++.+.++- .+.|+++||+.||++||+.|+.|+||+|+.+.+|+.|| .|+.+++.++|.++|++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 4555555555432 15689999999999999999999999999999999988 78889999999998864
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-11 Score=122.81 Aligned_cols=141 Identities=19% Similarity=0.225 Sum_probs=101.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc-ccchhhh---------ccC---------------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV-STGPDLE---------LLS--------------- 492 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~-~~g~~~~---------~~~--------------- 492 (792)
++.|.+.++|++++++|++++++|||++..+..++++++++...+ ..|..+. ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 589999999999999999999999999999999999999852111 1111000 000
Q ss_pred --------------------HHHHHHhhhc--ceE-----EEEeC--hhhHHHHHHHHhhcCC---CEEEEEcCCcccHH
Q 045750 493 --------------------QESFHERVKR--ATV-----LARLT--PTQKLRVVQSLQSVGK---HVVGFLGDGINDSL 540 (792)
Q Consensus 493 --------------------~~~~~~~~~~--~~v-----~~~~~--p~~K~~iv~~l~~~~~---~~v~~iGDg~ND~~ 540 (792)
.+.+.+.+.. ..+ +...+ ...|...++.+.++-+ +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011111111 011 11222 3478888877766421 45899999999999
Q ss_pred HHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 541 ALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 541 ~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999988888887653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.4e-11 Score=133.47 Aligned_cols=54 Identities=30% Similarity=0.453 Sum_probs=51.2
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 527 HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 527 ~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
+.|+++|||.||++||+.|+.||||+||.+.+|+.||+|+.+++.++|.++|++
T Consensus 524 eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 524 DEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred HHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999864
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.3e-11 Score=121.70 Aligned_cols=143 Identities=20% Similarity=0.217 Sum_probs=102.2
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-Cccccchhh----------hccC------------
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDL----------ELLS------------ 492 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~----------~~~~------------ 492 (792)
...+.|.+.++|++++++|++++++|||++..+..+.+++++.. ....+|.-+ ..++
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 45688999999999999999999999999999999999999841 111111111 0000
Q ss_pred ---------------------------------------------------------HHH-------HHHhhhcceEEE-
Q 045750 493 ---------------------------------------------------------QES-------FHERVKRATVLA- 507 (792)
Q Consensus 493 ---------------------------------------------------------~~~-------~~~~~~~~~v~~- 507 (792)
.+. +.+.......+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 000 111111111111
Q ss_pred ------Ee--ChhhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHH
Q 045750 508 ------RL--TPTQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 508 ------~~--~p~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
.. ....|...++.+.+.- .+.++++||+.||.+||+.||.|+||+|+++.+++.||+++.+++-++|.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 12 2356888777777531 167889999999999999999999999999999999999999888899988
Q ss_pred HH
Q 045750 577 GV 578 (792)
Q Consensus 577 ~i 578 (792)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 75
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.9e-11 Score=119.17 Aligned_cols=142 Identities=19% Similarity=0.237 Sum_probs=101.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc-ccchhh-----------hccC-------------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV-STGPDL-----------ELLS------------- 492 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~-~~g~~~-----------~~~~------------- 492 (792)
.+.+.++++|++++++|++++++|||+...+..+.+++|+....+ ..|..+ ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 588999999999999999999999999999999999999732111 011100 0000
Q ss_pred -----------------------HHHHHHhhhc----ceE-----EEEeCh--hhHHHHHHHHhhcC---CCEEEEEcCC
Q 045750 493 -----------------------QESFHERVKR----ATV-----LARLTP--TQKLRVVQSLQSVG---KHVVGFLGDG 535 (792)
Q Consensus 493 -----------------------~~~~~~~~~~----~~v-----~~~~~p--~~K~~iv~~l~~~~---~~~v~~iGDg 535 (792)
.+........ ..+ +....| ..|...++.+.++- .+.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0001111110 001 122223 46877777776642 1568999999
Q ss_pred cccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH----HHHHHH
Q 045750 536 INDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV----LVAGVE 579 (792)
Q Consensus 536 ~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~----i~~~i~ 579 (792)
.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++ +.+.++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999889999 766664
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-10 Score=121.49 Aligned_cols=68 Identities=19% Similarity=0.249 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++- .+.++++||+.||++|++.|++|+||+|+.+.+|+.||+++.+++.++|.++|++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 4555555554431 1568999999999999999999999999999999999999999999999998863
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2e-10 Score=120.56 Aligned_cols=128 Identities=17% Similarity=0.230 Sum_probs=99.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE-----eChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR-----LTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~-----~~p~ 512 (792)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++... . ..++..+ ..+-.+ +..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~--a-n~lei~d----------g~ltg~v~g~iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAV--A-NELEIMD----------GKLTGNVLGDIVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEE--E-eEEEEEC----------CEEEeEecCccCCcc
Confidence 57999999999999999999999999988899999999985411 1 0000000 001011 2346
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.|.+.++.+.++. .+.++++|||.||++|++.||+|||+ |+.+.+++.||.++..++++++..++-
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 7888888877652 26789999999999999999999999 999999999999999999999877653
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.6e-10 Score=110.97 Aligned_cols=131 Identities=18% Similarity=0.120 Sum_probs=96.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
++.|++++.|+.+++.| +++++||-....+..+++++|++.. +..+ +..-+.. .+... . ...++.|...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~--~an~-l~~~~~g----~~tG~-~--~~~~~~K~~~ 136 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL--LCHK-LEIDDSD----RVVGY-Q--LRQKDPKRQS 136 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh--hcee-eEEecCC----eeECe-e--ecCcchHHHH
Confidence 68999999999999985 9999999999999999999999631 1110 0000000 00000 0 1357789999
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
++.+++.+ ..+.++|||.||++|++.||+|+++. +.+.+++.||-...-.+.+.+..++.++
T Consensus 137 l~~l~~~~-~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 137 VIAFKSLY-YRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHhhC-CCEEEEeCCHHHHHHHHhCCCCEEec-CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 99998877 68899999999999999999999995 4455555565544445777777777665
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.3e-10 Score=107.09 Aligned_cols=104 Identities=12% Similarity=0.181 Sum_probs=83.9
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe--ChhhHHHHHHHHh
Q 045750 445 QALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL--TPTQKLRVVQSLQ 522 (792)
Q Consensus 445 ~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~iv~~l~ 522 (792)
.+|+.|+++|+++.++|+.+...+....+++|+.. .|... .|+....+++.++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-------------------------~f~~~kpkp~~~~~~~~~l~ 95 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-------------------------FHEGIKKKTEPYAQMLEEMN 95 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-------------------------EEecCCCCHHHHHHHHHHcC
Confidence 47999999999999999999999999999999963 33322 2333344444443
Q ss_pred hcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHH
Q 045750 523 SVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVL 574 (792)
Q Consensus 523 ~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i 574 (792)
-.. +.++++||+.||++|++.|++++||+|+.+.+++.|++|+.+++-.+.
T Consensus 96 ~~~-~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 96 ISD-AEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred cCH-HHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 333 679999999999999999999999999999999999999876665543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.2e-09 Score=110.66 Aligned_cols=142 Identities=17% Similarity=0.113 Sum_probs=96.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-------ccccch--h------h--hccCHHHHH----
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT-------HVSTGP--D------L--ELLSQESFH---- 497 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~-------~~~~g~--~------~--~~~~~~~~~---- 497 (792)
..+.+.++|++++++|++++++|||+...+..+.+++|+... .+.... . + ..++.+...
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 455799999999999999999999999999999999998321 111100 0 0 001100000
Q ss_pred -------------------------------------------------------Hhhhc--ceE-----EEEeCh--hh
Q 045750 498 -------------------------------------------------------ERVKR--ATV-----LARLTP--TQ 513 (792)
Q Consensus 498 -------------------------------------------------------~~~~~--~~v-----~~~~~p--~~ 513 (792)
+.+.+ ..+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00000 000 111112 35
Q ss_pred HHHHHHHHhhcC-----CCEEEEEcCCcccHHHHHhCCeeEEecCCc---HHHHhh--c-CEEeccCCchHHHHHHHH
Q 045750 514 KLRVVQSLQSVG-----KHVVGFLGDGINDSLALDAANVGISVDSGA---SVAKDL--A-DIILLEKDLNVLVAGVER 580 (792)
Q Consensus 514 K~~iv~~l~~~~-----~~~v~~iGDg~ND~~~l~~A~vgia~~~~~---~~~~~~--a-d~vl~~~~~~~i~~~i~~ 580 (792)
|...++.+.++- .+.++++||+.||.+|++.||.||||+|+. +.+|+. | ++|+.+++-+||.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 666666555431 367999999999999999999999999987 478887 4 599999999999998864
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.3e-09 Score=112.63 Aligned_cols=66 Identities=27% Similarity=0.294 Sum_probs=56.6
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.|..-++.+.+.. .+.++++||+.||++|++.|+.|+||+++++.+|+.||+++.+++.++|.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 5777777766542 15689999999999999999999999999999999999999999999987653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.3e-09 Score=111.47 Aligned_cols=143 Identities=15% Similarity=0.110 Sum_probs=95.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--Cccccchhhh----------------ccCHHHHHHh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLE----------------LLSQESFHER 499 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~----------------~~~~~~~~~~ 499 (792)
.+.+.++++|++++++|++++++|||+...+..+++++|++. -....|..+. .++.+...++
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 456889999999999999999999999999999999999841 1111111000 0111000000
Q ss_pred -------------------------------------------------------------hh--cceE-----EEEeCh
Q 045750 500 -------------------------------------------------------------VK--RATV-----LARLTP 511 (792)
Q Consensus 500 -------------------------------------------------------------~~--~~~v-----~~~~~p 511 (792)
+. ...+ +....|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 00 0000 112222
Q ss_pred --hhHHHHHHHHhhc------CCCEEEEEcCCcccHHHHHhCCeeEEecCCc-HH-----HHhhcCEEeccCCchHHHHH
Q 045750 512 --TQKLRVVQSLQSV------GKHVVGFLGDGINDSLALDAANVGISVDSGA-SV-----AKDLADIILLEKDLNVLVAG 577 (792)
Q Consensus 512 --~~K~~iv~~l~~~------~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~-~~-----~~~~ad~vl~~~~~~~i~~~ 577 (792)
.+|..-++.+.++ ....|+++||+.||++||+.|++||||+++. +. .+..+|+++...+-+++.++
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 3466555555442 1167999999999999999999999999554 22 45579999999999999988
Q ss_pred HHH
Q 045750 578 VER 580 (792)
Q Consensus 578 i~~ 580 (792)
+++
T Consensus 264 l~~ 266 (271)
T PRK03669 264 LDH 266 (271)
T ss_pred HHH
Confidence 864
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.5e-10 Score=94.62 Aligned_cols=69 Identities=29% Similarity=0.458 Sum_probs=58.5
Q ss_pred CCCCchHHHHHHHHHhcCcc----cccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhc
Q 045750 289 DQKYPLDDAILAYVYTNGYR----FQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVC 364 (792)
Q Consensus 289 ~~~~p~~~al~~~~~~~~~~----~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~ 364 (792)
..|+|.|.||+.++...|.. ..+..++.++.+||+|+||+|++++++ ++ .+++++|||||.|+++|
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~~---~~-------~~~~~~KGA~e~il~~C 88 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVRN---DG-------KYILYVKGAPEVILDRC 88 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEeC---CC-------EEEEEcCCChHHHHHhc
Confidence 56899999999999988543 356789999999999999999999982 11 46779999999999999
Q ss_pred ccc
Q 045750 365 SFV 367 (792)
Q Consensus 365 ~~~ 367 (792)
+++
T Consensus 89 t~i 91 (91)
T PF13246_consen 89 THI 91 (91)
T ss_pred CCC
Confidence 853
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.6e-09 Score=101.81 Aligned_cols=106 Identities=17% Similarity=0.260 Sum_probs=85.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhh--
Q 045750 446 ALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQS-- 523 (792)
Q Consensus 446 ~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~-- 523 (792)
+|++|+++|+++.++||++...+..+.+++|+.. .|... ..|.+.++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-------------------------~~~~~--~~k~~~~~~~~~~~ 88 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-------------------------LYQGQ--SNKLIAFSDILEKL 88 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-------------------------EEecc--cchHHHHHHHHHHc
Confidence 8999999999999999999999999999999964 22211 234555444433
Q ss_pred --cCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH-HHHHHH
Q 045750 524 --VGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV-LVAGVE 579 (792)
Q Consensus 524 --~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~-i~~~i~ 579 (792)
.. +.++++||+.||.+|++.|++++++.++.+..+..+|+++.++.-++ +.++++
T Consensus 89 ~~~~-~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 89 ALAP-ENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred CCCH-HHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 23 67999999999999999999999999999999999999998776444 555543
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.4e-09 Score=95.07 Aligned_cols=115 Identities=18% Similarity=0.304 Sum_probs=94.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 445 QALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 445 ~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
..|+.+.+.|+++.++|||+...+..-|+++||.. +| .-.++|....+.+.+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-------------------------~~--qG~~dK~~a~~~L~~~ 94 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-------------------------LY--QGISDKLAAFEELLKK 94 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-------------------------ee--echHhHHHHHHHHHHH
Confidence 36899999999999999999999999999999964 22 3346777776666654
Q ss_pred C---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCC----chHHHHHHHHhHHhHH
Q 045750 525 G---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD----LNVLVAGVERGRVTFG 586 (792)
Q Consensus 525 ~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~----~~~i~~~i~~gR~~~~ 586 (792)
- .+.|+++||..||.|+|++.++++|+.++.+..++.||+|+..+. ...+.++|..++..+.
T Consensus 95 ~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 95 LNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred hCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 2 267999999999999999999999999999999999999997654 4556666666665543
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.4e-08 Score=105.68 Aligned_cols=68 Identities=19% Similarity=0.203 Sum_probs=55.4
Q ss_pred hHHHHHHHHhhc---CC-CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH----hhc-CEEe--ccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSV---GK-HVVGFLGDGINDSLALDAANVGISVDSGASVAK----DLA-DIIL--LEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~---~~-~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~----~~a-d~vl--~~~~~~~i~~~i~~ 580 (792)
.|...++.+.+. .. +.|+++||+.||++|++.|++|+||+||.+.+| .+| +.++ ..++-+++.+++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 566666666542 33 678999999999999999999999999999999 666 6777 56778899888853
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.1e-09 Score=104.86 Aligned_cols=126 Identities=22% Similarity=0.287 Sum_probs=93.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE-----eChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR-----LTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~-----~~p~ 512 (792)
+++|++++.++.|+++|++++++||.....+..+.+++|+.. +... .+... ...+... ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~--~~~~-~~~~~----------~~~~~~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA--AFAN-RLEVE----------DGKLTGLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEee-EEEEE----------CCEEEEEecCcccCCc
Confidence 589999999999999999999999999999999999999864 1111 00000 0001111 1123
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHH
Q 045750 513 QKLRVVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAG 577 (792)
Q Consensus 513 ~K~~iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~ 577 (792)
.|..+++.+.++.+ +.++++||+.||+++.+.||+++++ ++.+..++.||+++.++++..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CCCHHHHHhchhccCCCCHHHHHhh
Confidence 36677766554431 4688999999999999999999998 4678889999999999998877654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.5e-09 Score=102.12 Aligned_cols=111 Identities=24% Similarity=0.267 Sum_probs=86.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc---------cccchhhhccCHHHHHHhhhcceEEE
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH---------VSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~---------~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
.+++|++.+.++.++++|.+++++||-...-+..+++++|++... .++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 678999999999999999999999999999999999999996421 11221 222
Q ss_pred -EeChhhHHHHHHHHhhc-CC--CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEe
Q 045750 508 -RLTPTQKLRVVQSLQSV-GK--HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIIL 566 (792)
Q Consensus 508 -~~~p~~K~~iv~~l~~~-~~--~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl 566 (792)
.+..+.|.+.++.+.+. |- +.+.++|||.||.|||+.||.+++++ +.+..+..|+...
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n-~~~~l~~~a~~~~ 199 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN-PKPKLRALADVRI 199 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC-cCHHHHHHHHHhc
Confidence 34457888888666653 31 36889999999999999999999995 4455666666544
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.7e-08 Score=96.53 Aligned_cols=111 Identities=15% Similarity=0.226 Sum_probs=85.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 445 QALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 445 ~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
.+|+.++++|+++.++||++...+..+++++|+.. +|. ..+.|...++.+.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-------------------------~f~--g~~~k~~~l~~~~~~ 107 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-------------------------LYQ--GQSNKLIAFSDLLEK 107 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-------------------------eec--CCCcHHHHHHHHHHH
Confidence 68999999999999999999999999999999864 232 223455555444332
Q ss_pred -C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCC----chHHHHHHHHhH
Q 045750 525 -G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD----LNVLVAGVERGR 582 (792)
Q Consensus 525 -~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~----~~~i~~~i~~gR 582 (792)
+ .+.++++||+.||++|++.|+++++++++.+..+..+|+++..+. ...+.+.+.+.|
T Consensus 108 ~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 108 LAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred hCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 2 157999999999999999999999999888899999999986443 344444444433
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.5e-06 Score=92.58 Aligned_cols=100 Identities=21% Similarity=0.216 Sum_probs=75.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
|++|++.+.+++++++|++++++|+.+...+..+++++|+- +.++.+++. .++.|+.|.+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF-d~Vigsd~~------------------~~~kg~~K~~~ 132 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF-DGVFASDGT------------------TNLKGAAKAAA 132 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-CEEEeCCCc------------------cccCCchHHHH
Confidence 57899999999999999999999999999999999999982 233333211 13456667655
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHH
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVA 558 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~ 558 (792)
++.. .+.+.+.++||+.+|.+|++.|+-+++++.+....
T Consensus 133 l~~~--l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~ 171 (479)
T PRK08238 133 LVEA--FGERGFDYAGNSAADLPVWAAARRAIVVGASPGVA 171 (479)
T ss_pred HHHH--hCccCeeEecCCHHHHHHHHhCCCeEEECCCHHHH
Confidence 4422 23233578999999999999999999997555433
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.76 E-value=7e-08 Score=98.21 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=58.2
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC----EEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLAD----IILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad----~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++-+ ..++++||+.||.+|++.++.|++|+|+.+.+|+.|| +|+.+++-+++.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 56777777665421 3688999999999999999999999999999999999 88888889999999864
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.5e-07 Score=93.67 Aligned_cols=126 Identities=23% Similarity=0.294 Sum_probs=90.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEE--EeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA--RLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~--~~~p~~K~ 515 (792)
++.|++++.++.|+++ +++.++|+.....+..+.+++|+... +.. .+.... +..+.. ...|..|.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~--f~~-~~~~~~---------~~~i~~~~~~~p~~k~ 134 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL--FCH-SLEVDE---------DGMITGYDLRQPDGKR 134 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh--hcc-eEEECC---------CCeEECccccccchHH
Confidence 4689999999999999 99999999999999999999998531 000 000000 000000 12467888
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCE-EeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADI-ILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~-vl~~~~~~~i~~~i~ 579 (792)
..++.++..+ ..++|+|||.||++|.++|++|+..+...+.....++. ++ +++..+...+.
T Consensus 135 ~~l~~~~~~~-~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 135 QAVKALKSLG-YRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred HHHHHHHHhC-CeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 8889888877 78999999999999999999999987544444445565 43 56666665553
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.62 E-value=4e-07 Score=93.42 Aligned_cols=145 Identities=16% Similarity=0.089 Sum_probs=99.6
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC---ccccchhhh-----------------------
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---HVSTGPDLE----------------------- 489 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---~~~~g~~~~----------------------- 489 (792)
..+..|...+++++++++|++++++|||+....+.+.+++++... ..-.|..+.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456789999999999999999999999999999999999988322 001111000
Q ss_pred ---------cc-----------------CHHH----H---HHhhh----cceE-EE-----EeCh--hhHHHHHHHHhhc
Q 045750 490 ---------LL-----------------SQES----F---HERVK----RATV-LA-----RLTP--TQKLRVVQSLQSV 524 (792)
Q Consensus 490 ---------~~-----------------~~~~----~---~~~~~----~~~v-~~-----~~~p--~~K~~iv~~l~~~ 524 (792)
.+ ..+. . .+.+. ...+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 0000 0 11111 1111 11 2233 4677778777664
Q ss_pred C---CCEEEEEcCCcccHHHHHh-CCeeEEecCCcHHHHhhcC-------EEeccCCchHHHHHHHH
Q 045750 525 G---KHVVGFLGDGINDSLALDA-ANVGISVDSGASVAKDLAD-------IILLEKDLNVLVAGVER 580 (792)
Q Consensus 525 ~---~~~v~~iGDg~ND~~~l~~-A~vgia~~~~~~~~~~~ad-------~vl~~~~~~~i~~~i~~ 580 (792)
- ...++++||+.||++|++. ++.|++|+|+.+.+|+.++ ++.....-+|+.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 2 2679999999999999998 6799999999999997654 66666678888888864
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.9e-07 Score=91.27 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=81.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
+++|++.+.++.|+++|++++++|+.....+..+++.+|+... +...-... ... . .....+....|..|.+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~--~~~~~~~~-~~g----~-~~p~~~~~~~~~~k~~~ 151 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV--YSNELVFD-EKG----F-IQPDGIVRVTFDNKGEA 151 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE--EEEEEEEc-CCC----e-EecceeeEEccccHHHH
Confidence 5899999999999999999999999999999999999998531 11100000 000 0 00001122345667777
Q ss_pred HHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC
Q 045750 518 VQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLAD 563 (792)
Q Consensus 518 v~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad 563 (792)
++.+.+.. .+.++++||+.||++|+++||++++++......+.++|
T Consensus 152 ~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 152 VERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 66665432 14688999999999999999999999765555555544
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.5e-06 Score=94.99 Aligned_cols=143 Identities=16% Similarity=0.120 Sum_probs=93.9
Q ss_pred CCChhHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc---------cccchhhh------------------
Q 045750 438 PPKDSAKQAL-WRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH---------VSTGPDLE------------------ 489 (792)
Q Consensus 438 ~~r~~~~~~I-~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~---------~~~g~~~~------------------ 489 (792)
.+.+...+++ +++++.|+.++++|||.+.....+.+++++.... +..+....
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3444455555 8999999999999999999999999999873210 10110000
Q ss_pred -----cc--------------------CHHH-------HHHhhh----cceE------EEEeCh--hhHHHHHHHHhhcC
Q 045750 490 -----LL--------------------SQES-------FHERVK----RATV------LARLTP--TQKLRVVQSLQSVG 525 (792)
Q Consensus 490 -----~~--------------------~~~~-------~~~~~~----~~~v------~~~~~p--~~K~~iv~~l~~~~ 525 (792)
.. ..+. +.+.+. .+.+ +....| ..|...++.+.++-
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 00 0000 111111 1111 223344 35888888886652
Q ss_pred ------CCEEEEEcCCcccHHHHHhCC-eeEEecCCcHHHHhhc--------CEEe-ccCCchHHHHHHHH
Q 045750 526 ------KHVVGFLGDGINDSLALDAAN-VGISVDSGASVAKDLA--------DIIL-LEKDLNVLVAGVER 580 (792)
Q Consensus 526 ------~~~v~~iGDg~ND~~~l~~A~-vgia~~~~~~~~~~~a--------d~vl-~~~~~~~i~~~i~~ 580 (792)
...++++||+.||++||+.|+ .||+|+|+.+.+|+.+ +++. .+++-+||.++|++
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 258899999999999999999 6999999999999753 4443 35567888888865
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.4e-07 Score=84.35 Aligned_cols=111 Identities=17% Similarity=0.173 Sum_probs=77.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
.+.|++++.++.||+.|.+++++||--...+..+|.++||+..++.-+.-+-+-+-+...-.. --.-+...-|.++
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~----~~ptsdsggKa~~ 163 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDT----NEPTSDSGGKAEV 163 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccccc----CCccccCCccHHH
Confidence 468999999999999999999999999999999999999976443322211110000000000 0011223579999
Q ss_pred HHHHhhcC-CCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 518 VQSLQSVG-KHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 518 v~~l~~~~-~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
++.+++.- .+.++|||||.||.+|+..|+.=++.+
T Consensus 164 i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 164 IALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99998852 267899999999999998876666654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.6e-06 Score=87.03 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=39.3
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
.+...++++++|++++++|++++++|||+...+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4566778999999999999999999999999999999999983
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.6e-06 Score=84.99 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=84.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE------eCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR------LTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~------~~p 511 (792)
++.|++.++++.|+++|+++.++||.....+..+.+.+|++...++.. .+.. ..+ ..+... ...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~-~~~~-~~~--------g~~~g~~~~~~~~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFAN-QILF-GDS--------GEYAGFDENEPTSRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEe-EEEE-cCC--------CcEECccCCCcccCC
Confidence 478999999999999999999999999999999999999963222210 0000 000 000000 112
Q ss_pred hhHHHHHHHHhhc-CCCEEEEEcCCcccHHHHHh--CCeeEEecCC--cHHHHhhcCEEeccCCchHHHH
Q 045750 512 TQKLRVVQSLQSV-GKHVVGFLGDGINDSLALDA--ANVGISVDSG--ASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 512 ~~K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~--A~vgia~~~~--~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
..|.+.++.+.+. +.+.++++||+.||+.|.++ ++++++.+.. .+.....+|+++ +++..+.+
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 3477777776654 32578899999999999888 4555555532 234455689987 45665544
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.39 E-value=1e-06 Score=86.61 Aligned_cols=92 Identities=22% Similarity=0.230 Sum_probs=71.2
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChh-h--HHHH
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPT-Q--KLRV 517 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~-~--K~~i 517 (792)
|++.+.|+.++++|++++++||.....+..+++.+|++...++..+. ..-. ......+.++. + |.+.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~---------~~~~~~~~~~~~~~~K~~~ 161 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNG---------GGIFTGRITGSNCGGKAEA 161 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTT---------CCEEEEEEEEEEESHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecc---------cceeeeeECCCCCCcHHHH
Confidence 88889999999999999999999999999999999998654444433 1100 11234455444 3 9999
Q ss_pred HHHH------hhcCCCEEEEEcCCcccHHHHH
Q 045750 518 VQSL------QSVGKHVVGFLGDGINDSLALD 543 (792)
Q Consensus 518 v~~l------~~~~~~~v~~iGDg~ND~~~l~ 543 (792)
++.+ +... ..++++|||.||.+|||
T Consensus 162 l~~~~~~~~~~~~~-~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 162 LKELYIRDEEDIDP-DRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHTHTC-CEEEEEESSGGGHHHHH
T ss_pred HHHHHHHhhcCCCC-CeEEEEECCHHHHHHhC
Confidence 9999 2334 88999999999999986
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.36 E-value=3e-06 Score=84.71 Aligned_cols=131 Identities=9% Similarity=0.087 Sum_probs=86.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcccc------chhhhccCHHHHHHhhhcceEE--EE
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVST------GPDLELLSQESFHERVKRATVL--AR 508 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~------g~~~~~~~~~~~~~~~~~~~v~--~~ 508 (792)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++... .+.. |..+.... .....+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~-~i~~n~~~~~~~~~~~~~--------p~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD-RIYCNEADFSNEYIHIDW--------PHPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc-cEEeceeEeeCCeeEEeC--------CCCCcccccc
Confidence 4789999999999999999999999999999999998875432 2211 11111000 000000 00
Q ss_pred eChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh--hcCEEeccCCchHHHHHHH
Q 045750 509 LTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD--LADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 509 ~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~--~ad~vl~~~~~~~i~~~i~ 579 (792)
.....|..+++.++... +.++++|||.||..|.+.||+.+|-+.-.+..++ .+.... ++|..|...++
T Consensus 140 ~cg~~K~~~l~~~~~~~-~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPN-DYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCCHHHHHHHHhhcC-CcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 01246899999988776 7789999999999999999998886522221121 122222 56777766663
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.8e-06 Score=83.61 Aligned_cols=135 Identities=10% Similarity=0.057 Sum_probs=84.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceE--EEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATV--LARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v--~~~~~p~~K~ 515 (792)
+++|++.+.++.|+++|+++.++||-....+..+.+++ +....++..... ...+.+......... +.......|.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~--~~~~~~~~~kp~p~~~~~~~~~~~~K~ 150 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSD--FSGEYITITWPHPCDEHCQNHCGCCKP 150 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEE--ecCCeeEEeccCCccccccccCCCchH
Confidence 68999999999999999999999999999999999988 754322211100 000000000000000 0000012488
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH--hhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAK--DLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~--~~ad~vl~~~~~~~i~~~i 578 (792)
.+++.++... ..+.++|||.||+.|.++||+.++-+.-.+.++ ..+.+.+ ++|..+...+
T Consensus 151 ~~l~~~~~~~-~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 151 SLIRKLSDTN-DFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred HHHHHhccCC-CCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 8888888776 678899999999999999999777431112211 2233333 5677666655
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.26 E-value=1e-05 Score=81.38 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=36.8
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
..+.++++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455999999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=9.6e-06 Score=83.65 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=86.7
Q ss_pred CCChhHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHhCCCC-----Cccc--cchh-hhccCHH--------------
Q 045750 438 PPKDSAKQALWRLAK-KGVKAKLLTGDSLSLAIKICHEVGIRT-----THVS--TGPD-LELLSQE-------------- 494 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~-~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-----~~~~--~g~~-~~~~~~~-------------- 494 (792)
.+.++++++|++|++ .|++++++|||+...+..+.+.+++.- ..+. .+.. ...++.+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 567899999999998 899999999999999999888777510 0000 0100 0011110
Q ss_pred --------------------------HHHHhh-------hcce-----EEEEeCh--hhHHHHHHHHhhcC---CCEEEE
Q 045750 495 --------------------------SFHERV-------KRAT-----VLARLTP--TQKLRVVQSLQSVG---KHVVGF 531 (792)
Q Consensus 495 --------------------------~~~~~~-------~~~~-----v~~~~~p--~~K~~iv~~l~~~~---~~~v~~ 531 (792)
...... .... -+.+..| .+|...++.+.++- ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 0001 1122223 36777777665542 257899
Q ss_pred EcCCcccHHHHHhC----CeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 532 LGDGINDSLALDAA----NVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 532 iGDg~ND~~~l~~A----~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
+||+.||.+||+.+ +.||+||++. ..|++.+ ++...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l--~~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRL--AGVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeC--CCHHHHHHHH
Confidence 99999999999999 9999999875 3477777 4666666665
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.8e-06 Score=81.97 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=76.7
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE-EEeChhhH
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL-ARLTPTQK 514 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~-~~~~p~~K 514 (792)
..+++|++.+.++.++++|++++++||.....+..+++++|++.- +.. ++....+..+ ...+. -.+..+.|
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~--~~~-~l~~~~~g~~-----~g~~~~~~~~g~~K 156 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA--IGT-RLEESEDGIY-----TGNIDGNNCKGEGK 156 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce--Eec-ceEEcCCCEE-----eCCccCCCCCChHH
Confidence 456899999999999999999999999999999999999999631 111 0100000000 00000 01335677
Q ss_pred HHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 515 LRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 515 ~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
.+.++.+.+. + .+.+.++||+.+|.+|++.|+.++++..
T Consensus 157 ~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 157 VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 7777665543 2 1368899999999999999999999863
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=9.7e-06 Score=81.95 Aligned_cols=126 Identities=21% Similarity=0.242 Sum_probs=88.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++.|++.++++.+++.|++++++||........+.+++|+... .++++..... .+-.|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN----------------KKPDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC----------------CCcChHHH
Confidence 45789999999999999999999999999999999999998531 1111111000 01122323
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecC----CcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDS----GASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~----~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
..+++.++... +.++++||+.||+.+.++||+ +|++.. ..+.....+++++ +++..+...+.++
T Consensus 156 ~~~~~~~~~~~-~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 156 LLACEKLGLDP-EEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred HHHHHHcCCCh-hheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 44555555445 678899999999999999999 666642 2334455688887 7788887777553
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.2e-06 Score=81.00 Aligned_cols=100 Identities=18% Similarity=0.230 Sum_probs=69.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE--EEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL--ARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~--~~~~p~~K~ 515 (792)
+++|++.+.++.+++.|++++++||.....+..+++++|+.. ++.. .+....+..+ .. ... ....+..|.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~--~~~~-~~~~~~~g~~---~g--~~~~~~~~~~~~K~ 144 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD--VFAN-RLEFDDNGLL---TG--PIEGQVNPEGECKG 144 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch--heee-eEEECCCCEE---eC--ccCCcccCCcchHH
Confidence 368999999999999999999999999999999999999863 1111 0000000000 00 000 123457888
Q ss_pred HHHHHHhhcC---CCEEEEEcCCcccHHHHHhC
Q 045750 516 RVVQSLQSVG---KHVVGFLGDGINDSLALDAA 545 (792)
Q Consensus 516 ~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A 545 (792)
+.++.+++.. .+.+.++|||.||.+|++.|
T Consensus 145 ~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 145 KVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 8888876541 25688999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.7e-05 Score=80.15 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=39.5
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
++...+.++++|++|+++||.++++||+.......+.+++|+.
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 3456788999999999999999999999999999999999994
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.6e-06 Score=75.98 Aligned_cols=116 Identities=22% Similarity=0.179 Sum_probs=75.7
Q ss_pred ccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC--CCccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 434 TFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR--TTHVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
.-..++.+++.+.+++|+++|++++++||+....+....+++|+. ...++......................+.+-.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 345689999999999999999999999999999999999999983 122222111110000000000111122234445
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCC-eeEE
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAAN-VGIS 550 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~-vgia 550 (792)
+.+..+.+.+.... +.++++||+.+|+.|.+.++ -+|+
T Consensus 100 ~~~~~~~~~~~~~~-~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 100 DKLLAALKLLGVDP-EEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHHcCCCh-hhEEEeCCCHHHHHHHHHcCCceee
Confidence 55666666665554 77899999999999999844 3544
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.14 E-value=2e-05 Score=79.10 Aligned_cols=124 Identities=23% Similarity=0.257 Sum_probs=88.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc--cccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH--VSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~--~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
...+-|+++++++.|+++|++..++|+++...+..+.+++|+.... ++.+..... .+=.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~----------------~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP----------------PKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC----------------CCcCHHH
Confidence 4467899999999999999999999999999999999999996421 111111100 1113444
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCC---eeEEecC--CcHHHHhhcCEEeccCCchHHHHHH
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAAN---VGISVDS--GASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~---vgia~~~--~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
....++.+.... +.++||||+.+|+.|-++|+ +|+..|. ........+|+++ +++..+...+
T Consensus 151 l~~~~~~~~~~~-~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLDP-EEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHhCCCh-hheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 555555555543 57999999999999999999 5666663 3455556699998 5677666554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.2e-05 Score=79.85 Aligned_cols=122 Identities=18% Similarity=0.204 Sum_probs=83.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+++++|+++|+++.++|+.....+....+++|+.. +.++...+.. ..+-.|+--.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVP----------------RPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCC----------------CCCCChHHHH
Confidence 678999999999999999999999999999999999999853 1111111000 0111222233
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEE-e--c--CCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGIS-V--D--SGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia-~--~--~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+++.++-.. +.+++|||+.+|+.+-++||+... + | +..+..+..+|+++ +++..+..++
T Consensus 139 ~~~~~~~~~~-~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVPP-EDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHcCCCh-hheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 4444444334 679999999999999999999543 3 3 22334566789987 5666665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.8e-06 Score=79.27 Aligned_cols=112 Identities=12% Similarity=0.133 Sum_probs=76.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEE-eChhh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLAR-LTPTQ 513 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~-~~p~~ 513 (792)
-+++|++.+.++.|++.|++++++|+.+......+.++.|+... .+++++...+ .+..+.-...+...+.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-NDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-CCCcEEEecCCCCccCcCCCCCC
Confidence 47899999999999999999999999999999999999998532 2332221111 00000000000001111 11235
Q ss_pred HHHHHHHHhhc-CCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 514 KLRVVQSLQSV-GKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 514 K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
|.++++.+++. . +.++++|||.||+.|.++||+-.|
T Consensus 150 K~~~~~~~~~~~~-~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKY-QHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcC-ceEEEECCCcchhchHhcCCcccc
Confidence 89999998887 6 789999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.7e-05 Score=81.16 Aligned_cols=53 Identities=25% Similarity=0.314 Sum_probs=43.9
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhC-CeeEEecCCcHHHHhhcCEE
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGD----GINDSLALDAA-NVGISVDSGASVAKDLADII 565 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGD----g~ND~~~l~~A-~vgia~~~~~~~~~~~ad~v 565 (792)
.+|..-++.+.++. +.|+++|| |.||++||+.| -.|+++.|+.+.+|..+.++
T Consensus 187 vsKg~al~~L~~~~-~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDF-KEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhh-hhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHh
Confidence 46788888887775 78999999 99999999976 56788889999998877654
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.3e-05 Score=86.97 Aligned_cols=39 Identities=21% Similarity=0.190 Sum_probs=36.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
.-+.++++|++++++|++++++|||+...+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 556789999999999999999999999999999999997
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.5e-05 Score=76.35 Aligned_cols=122 Identities=23% Similarity=0.223 Sum_probs=82.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.. ..++.+++... .+-.|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~Kp~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH----------------AKPDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC----------------CCCCcHHHH
Confidence 367999999999999999999999999999999999999854 11111111100 111233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-Ee--cC-CcH-HHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SV--DS-GAS-VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~--~~-~~~-~~~~~ad~vl~~~~~~~i~~~i 578 (792)
++++.++... ..+++|||+.+|+.+-++||+-. ++ +. ..+ .....+|+++ +++..+.+.+
T Consensus 146 ~~~~~~~~~~-~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAKP-EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHcCCCH-HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 4444444334 67889999999999999999943 33 32 222 2344588877 5677766654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.2e-05 Score=78.08 Aligned_cols=124 Identities=23% Similarity=0.324 Sum_probs=82.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++.|++.++++.|+++|++++++|+.+...+..+.+++|+.. +.++++.+... .+-.|+--
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~----------------~Kp~p~~~ 163 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ----------------KKPDPAAL 163 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC----------------CCCCcHHH
Confidence 4678999999999999999999999999999998988888843 11111110000 00111112
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecC----CcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDS----GASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~----~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
..+.+.+.-.. +.+++|||+.||+.+.++||+ .+++.. ..+.....+|+++ +++..+.+++.
T Consensus 164 ~~~~~~~g~~~-~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 164 LFVMKMAGVPP-SQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHhCCCh-hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 23333333333 678899999999999999998 444432 2223445788887 56777765543
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.87 E-value=8.9e-05 Score=73.58 Aligned_cols=40 Identities=30% Similarity=0.365 Sum_probs=37.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
++.+.+.++|++|++.|++++++|||....+..+.+.++.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~ 56 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPL 56 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCC
Confidence 5889999999999999999999999999999999988654
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.86 E-value=6.5e-05 Score=75.10 Aligned_cols=120 Identities=20% Similarity=0.211 Sum_probs=79.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+.+...+..+.+++|+... .++.+.+... .+-.|+--.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~p~~~~ 148 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------------RKPHPDPLL 148 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC----------------CCCChHHHH
Confidence 5789999999999999999999999999999999999998531 1111111000 011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEE-e--cCC--cHHHHhhcCEEeccCCchHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGIS-V--DSG--ASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia-~--~~~--~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
...+.+.... +.++++||+.+|+.+.++||+... + |.. .+.....+|+++ +++..+..
T Consensus 149 ~~~~~~~~~~-~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 149 LAAERLGVAP-QQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHcCCCh-hHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 3444444334 668899999999999999998544 4 311 223334688877 45555543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00039 Score=82.59 Aligned_cols=136 Identities=20% Similarity=0.257 Sum_probs=86.4
Q ss_pred CCChhHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHhCCC----CCcc--ccchhhhcc-------------------
Q 045750 438 PPKDSAKQALWRLAK-KGVKAKLLTGDSLSLAIKICHEVGIR----TTHV--STGPDLELL------------------- 491 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~-~Gi~v~~~Tgd~~~~a~~ia~~~gi~----~~~~--~~g~~~~~~------------------- 491 (792)
.+.+++.+++++|.+ .|+.|+++|||...........+++. ++.. ..+..+...
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 467899999999999 69999999999999998887766651 0000 001110000
Q ss_pred ----------------------CH-------HHHHHhh----hc--ceEE-----EEeCh--hhHHHHHHHHhhcC-CCE
Q 045750 492 ----------------------SQ-------ESFHERV----KR--ATVL-----ARLTP--TQKLRVVQSLQSVG-KHV 528 (792)
Q Consensus 492 ----------------------~~-------~~~~~~~----~~--~~v~-----~~~~p--~~K~~iv~~l~~~~-~~~ 528 (792)
+. +++.+.+ .. ..+. .+..| .+|...++.+.+.. ...
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 00 0011111 00 1111 12223 47888888877642 268
Q ss_pred EEEEcCCcccHHHHHhC---CeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 529 VGFLGDGINDSLALDAA---NVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 529 v~~iGDg~ND~~~l~~A---~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
++++||+.||.+||+.+ +.+|+||++ +.+|++++.+ .+.+...++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCC--HHHHHHHHH
Confidence 99999999999999986 688999874 5678888854 355665553
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00018 Score=73.27 Aligned_cols=69 Identities=17% Similarity=0.153 Sum_probs=47.8
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHH-----HHhhc---C-EEeccCCchHHHHHHH
Q 045750 512 TQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASV-----AKDLA---D-IILLEKDLNVLVAGVE 579 (792)
Q Consensus 512 ~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~-----~~~~a---d-~vl~~~~~~~i~~~i~ 579 (792)
..|...++.++++- .+.|+++||+.||.+||..++-||.++|+.++ ..... . ++...+.-.||.++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 57888888888762 14678899999999999999999999999888 32222 2 4444556677777776
Q ss_pred H
Q 045750 580 R 580 (792)
Q Consensus 580 ~ 580 (792)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 5
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00013 Score=73.36 Aligned_cols=119 Identities=21% Similarity=0.216 Sum_probs=77.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
-++.|++.++++.|+++|+++.++|+........+.+++|+... .++.+.... ..+-.|+--
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~ 154 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP----------------YSKPHPEVY 154 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC----------------CCCCCHHHH
Confidence 46789999999999999999999999999999999999998531 111111100 001112222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe-cC---CcHHHHhhcCEEeccCCchHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-DS---GASVAKDLADIILLEKDLNVL 574 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~-~~---~~~~~~~~ad~vl~~~~~~~i 574 (792)
..+.+.+.-.. +.++++||+.||+.+-++||+.... .. ..+.....+|.++ .++..+
T Consensus 155 ~~~~~~~~~~~-~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl 215 (222)
T PRK10826 155 LNCAAKLGVDP-LTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTEL 215 (222)
T ss_pred HHHHHHcCCCH-HHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHH
Confidence 22333332223 6688999999999999999986543 22 2222234577776 445554
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00019 Score=71.20 Aligned_cols=106 Identities=12% Similarity=0.057 Sum_probs=74.4
Q ss_pred CCChhHHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALW-RLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~-~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
.++|++.+.|+ .++++|++++++|+-....+..+++..|+.. ..++ |.+++..+.. . ..=..|..++|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i-~t~le~~~gg-------~-~~g~~c~g~~Kv 164 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLI-ASQIERGNGG-------W-VLPLRCLGHEKV 164 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEE-EEEeEEeCCc-------e-EcCccCCChHHH
Confidence 46899999996 7888999999999999999999999966522 2222 3333211100 0 011235667888
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
.-++..-........+-||+.||.|||+.||.+++++
T Consensus 165 ~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 165 AQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7666443222145668999999999999999999995
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00024 Score=73.08 Aligned_cols=95 Identities=18% Similarity=0.133 Sum_probs=66.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC---ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.+.++.|+++|+++.++|+.....+..+.+++|+... .++++.+... .+=.|+--
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~----------------~KP~p~~~ 162 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPA----------------GRPAPWMA 162 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCC----------------CCCCHHHH
Confidence 4678999999999999999999999999999999999988532 2222221110 01123332
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
....+.+.-...+.+++|||+.+|+.+-+.||+.
T Consensus 163 ~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 163 LKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 3344444322125689999999999999999983
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00042 Score=71.64 Aligned_cols=119 Identities=16% Similarity=0.131 Sum_probs=80.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++-|++.++++.|++.|+++.++|+.....+..+.+.+|+... .++++.+. ...|+--.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~-------------------~~k~~~~~ 202 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI-------------------LSKRRALS 202 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC-------------------CCCHHHHH
Confidence 5679999999999999999999999999999999999998532 11111100 00111112
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-EecC--CcH--HHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SVDS--GAS--VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~~~--~~~--~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+++.+.-.. +.+++|||+.+|+.+-++||+-. ++.. .+. .....+|+++ +++..+...+
T Consensus 203 ~~l~~~~~~p-~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 203 QLVAREGWQP-AAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHhCcCh-hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 2222232233 67899999999999999999953 3322 222 2344689987 6677776655
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00023 Score=71.60 Aligned_cols=122 Identities=25% Similarity=0.235 Sum_probs=79.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC--C--CccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR--T--THVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~--~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
.++.||+.+.++.|+++|+++.++|+.....+..+.+++|+. . ..++++.+... .+-.|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~----------------~KP~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA----------------GRPAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC----------------CCCCHH
Confidence 478999999999999999999999999999999999999986 2 22222222110 011122
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE--EecCC---cHHH-HhhcCEEeccCCchHHHH
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI--SVDSG---ASVA-KDLADIILLEKDLNVLVA 576 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi--a~~~~---~~~~-~~~ad~vl~~~~~~~i~~ 576 (792)
--....+.+.-...+.++++||+.+|+.+-++||+.. ++..+ .+.. ...+|.++ +++..+..
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2223333333221257899999999999999999986 34322 1222 23467766 45555543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00044 Score=68.87 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=74.8
Q ss_pred CCChhHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CccccchhhhccCHHHHHHhhhcceEE-EEeChhhH
Q 045750 438 PPKDSAKQAL-WRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDLELLSQESFHERVKRATVL-ARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I-~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~-~~~~p~~K 514 (792)
.+.|++.+.| +.+++.|++++++|+....-+..+++.+|+.. ..++ +.+++.. ....+. ..|..++|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i-~t~l~~~---------~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI-ASQMQRR---------YGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE-EEEEEEE---------EccEECCccCCChHH
Confidence 4489999999 57888999999999999999999999999521 1222 3222210 000011 23556788
Q ss_pred HHHHHHH-hhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 515 LRVVQSL-QSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 515 ~~iv~~l-~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
..-++.. .... ....+-||+.||.|||+.|+.+++++.
T Consensus 165 ~~~l~~~~~~~~-~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 165 VAQLERKIGTPL-RLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred HHHHHHHhCCCc-ceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8766654 3233 456689999999999999999999953
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00029 Score=71.23 Aligned_cols=122 Identities=20% Similarity=0.158 Sum_probs=82.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+... .++.+.+.. ..+-.|+--.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC----------------CCCCCHHHHH
Confidence 5789999999999999999999999999988888898988531 111111100 0111233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-Ee--cC--Cc-HHHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SV--DS--GA-SVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~--~~--~~-~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+++.+.-.. +.+++|||+.+|+.+-++||+.. ++ |. .. ......+|+++ +++..+.+.+
T Consensus 159 ~~~~~l~~~p-~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 159 VAAERIGVAP-TDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHhCCCh-hhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 5555555545 77999999999999999999853 34 21 11 22234588888 5566655443
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00079 Score=68.56 Aligned_cols=137 Identities=12% Similarity=0.144 Sum_probs=82.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
.-+++|++.+.++.|++.|+++.++||-....+..+.+++|+... .++++. +..-.+..... ...-.+ ....
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~-L~f~~dGvltG-~~~P~i----~~~~ 192 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNF-MDFDEDGVLKG-FKGPLI----HTFN 192 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeee-EEECCCCeEeC-CCCCcc----cccc
Confidence 357899999999999999999999999999999999999998421 121110 00000000000 000001 1134
Q ss_pred HHHHHH-----HHhh-cCCCEEEEEcCCcccHHHHHhC---CeeEEec--CCc-----HHHHhhcCEEeccCCchHHHHH
Q 045750 514 KLRVVQ-----SLQS-VGKHVVGFLGDGINDSLALDAA---NVGISVD--SGA-----SVAKDLADIILLEKDLNVLVAG 577 (792)
Q Consensus 514 K~~iv~-----~l~~-~~~~~v~~iGDg~ND~~~l~~A---~vgia~~--~~~-----~~~~~~ad~vl~~~~~~~i~~~ 577 (792)
|.+.+. .+.+ .....|+++|||.||+.|..-. .--+.+| |.. +.-+++=|+|+.+|.--.++..
T Consensus 193 K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~ 272 (277)
T TIGR01544 193 KNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANS 272 (277)
T ss_pred cHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHH
Confidence 554333 2221 2226788999999999996433 2234444 332 3455678999998876556555
Q ss_pred H
Q 045750 578 V 578 (792)
Q Consensus 578 i 578 (792)
|
T Consensus 273 i 273 (277)
T TIGR01544 273 I 273 (277)
T ss_pred H
Confidence 5
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00054 Score=70.37 Aligned_cols=118 Identities=12% Similarity=0.139 Sum_probs=79.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.. ..++++.+... .+-.|+--.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~----------------~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR----------------GKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC----------------CCCCHHHHH
Confidence 568999999999999999999999999999999999999853 22333322210 111233333
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-Eec-CCcHHHHhhcCEEeccCCchHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SVD-SGASVAKDLADIILLEKDLNVL 574 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~~-~~~~~~~~~ad~vl~~~~~~~i 574 (792)
..++.+.-.. ..+++|||+.+|+.+-++||+.. ++. .........+|+++ +++..+
T Consensus 173 ~a~~~l~~~p-~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 173 YAAERLGFIP-ERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHhCCCh-HHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 4445454444 67889999999999999999843 443 22222233477776 444443
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00036 Score=69.85 Aligned_cols=91 Identities=23% Similarity=0.311 Sum_probs=65.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeC--
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDS----LSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT-- 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~----~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-- 510 (792)
-.+.|++++.++.++++|+++.++|||. ..++..+.+.+|+...... ..+++..+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f-------------------~vil~gd~~~ 173 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN-------------------PVIFAGDKPG 173 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce-------------------eEEEcCCCCC
Confidence 3467889999999999999999999975 5688889999999421100 01222221
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEe
Q 045750 511 PTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISV 551 (792)
Q Consensus 511 p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~ 551 (792)
..+|.. .+++.+ .++++||..+|+.+-+.||+ +|++
T Consensus 174 K~~K~~---~l~~~~--i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 174 QYTKTQ---WLKKKN--IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCHHH---HHHhcC--CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 134444 444554 57899999999999999998 5555
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00055 Score=70.07 Aligned_cols=114 Identities=16% Similarity=0.187 Sum_probs=78.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+.....+....+++|+.. +.++.+.+... .+-.|+--.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~----------------~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH----------------AKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC----------------CCCChHHHH
Confidence 567899999999999999999999999999999999999853 22233322211 111233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-Eec--CCcH-HHHhhcCEEecc
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SVD--SGAS-VAKDLADIILLE 568 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~~--~~~~-~~~~~ad~vl~~ 568 (792)
...+.+.... +.+++|||+.+|+.+-++|++-. ++. ...+ .....+|+++.+
T Consensus 172 ~a~~~~~~~~-~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 172 KALEVLKVSK-DHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHhCCCh-hHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 4455554444 67899999999999999999843 343 2222 223468888743
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00071 Score=64.26 Aligned_cols=141 Identities=20% Similarity=0.298 Sum_probs=92.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccch-hhhcc--CHHHHHHhhh-------------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGP-DLELL--SQESFHERVK------------- 501 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~-~~~~~--~~~~~~~~~~------------- 501 (792)
.+-|++.++++.+.+. ...+++|-.-.+-+.++|+.+|++...+..-+ ++++. ++++-.+.+.
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5679999999999887 45566666677788999999999543221111 11110 1111111110
Q ss_pred ---cceEEEEeChhhHHHHHHHHhhcCC-----------------CEEEEEcCCcccHHHHHhCCe--eEEec-CCcHHH
Q 045750 502 ---RATVLARLTPTQKLRVVQSLQSVGK-----------------HVVGFLGDGINDSLALDAANV--GISVD-SGASVA 558 (792)
Q Consensus 502 ---~~~v~~~~~p~~K~~iv~~l~~~~~-----------------~~v~~iGDg~ND~~~l~~A~v--gia~~-~~~~~~ 558 (792)
-..+|.|..|.+-.++++..+.-|+ ...+++||+..|+.||+.+.= |+|+. ||.+-+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 0126777777665555555554332 346789999999999998843 47776 888888
Q ss_pred HhhcCEEeccCCchHHHHHHH
Q 045750 559 KDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 559 ~~~ad~vl~~~~~~~i~~~i~ 579 (792)
...||+-+.+++..++...|+
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 899999988888888777763
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00073 Score=63.48 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=68.5
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHH-----hCCCCCccc-cc-hhhhccCHHHHHHhhhcceE
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAI---KICHE-----VGIRTTHVS-TG-PDLELLSQESFHERVKRATV 505 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~---~ia~~-----~gi~~~~~~-~g-~~~~~~~~~~~~~~~~~~~v 505 (792)
+|...|++++++++++++|++++++|||+...+. ....+ .+++...++ .+ ........+ +
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e----------~ 94 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHRE----------V 94 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcc----------c
Confidence 4788999999999999999999999999999884 55555 234322222 11 111111111 2
Q ss_pred EEEeChhhHHHHHHHHhhc----CCCEEEEEcCCcccHHHHHhCCee
Q 045750 506 LARLTPTQKLRVVQSLQSV----GKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~~----~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
..+..-+.|.+.++.+++. +...++.+||+.+|+.+.+++++.
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 2222223477777777762 336778899999999999888774
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00092 Score=69.36 Aligned_cols=94 Identities=17% Similarity=0.109 Sum_probs=63.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++-|++.++++.|+++|+++.++||.....+..+.+.+|+.. +.++++.+... .+-.|+--
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~----------------~KP~p~~~ 164 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPA----------------GRPYPWMA 164 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCC----------------CCCChHHH
Confidence 567999999999999999999999999999888888777642 11111111100 01112222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV 547 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v 547 (792)
....+.+.-...+.+++|||+.+|+.+-+.||+
T Consensus 165 ~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 165 LKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 333333332211568999999999999999998
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00052 Score=68.79 Aligned_cols=90 Identities=22% Similarity=0.244 Sum_probs=63.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGD----SLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd----~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
.+.+++++.++.++++|+++.++|++ ...++..+.+.+|++.. .++.++.... ..|
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~------------------~Kp 175 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ------------------YQY 175 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC------------------CCC
Confidence 34555999999999999999999999 77899999999999641 1111111100 012
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEe
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISV 551 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~ 551 (792)
+|. ..+++.+ .++++||+.||+.+-+.|++ +|++
T Consensus 176 -~~~---~~l~~~~--i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 176 -TKT---QWIQDKN--IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred -CHH---HHHHhCC--CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 232 3445554 47899999999999999998 3444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00094 Score=74.99 Aligned_cols=122 Identities=13% Similarity=0.083 Sum_probs=84.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++++++.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcH---
Confidence 678999999999999999999999999999999999999853 2222222110 011232
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEec--CCcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVD--SGASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~--~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
.+...+++.+.+.++++||+.+|+.+-+.||+ .|++. ...+.....+|+++ +++..+.+.+...
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 22223333333679999999999999999998 44443 22222234578887 5677777766544
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0011 Score=66.45 Aligned_cols=112 Identities=21% Similarity=0.168 Sum_probs=73.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLR 516 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 516 (792)
++.|++.++++.|+++|+++.++|+.....+...-+..|+.. ..++++.+... .+-.|+--..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~----------------~KP~p~~~~~ 146 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKR----------------GKPEPDAYLL 146 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcC----------------CCCCcHHHHH
Confidence 578999999999999999999999998877777767777742 12222211100 1112333334
Q ss_pred HHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCc-HHHHhhcCEEe
Q 045750 517 VVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGA-SVAKDLADIIL 566 (792)
Q Consensus 517 iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~-~~~~~~ad~vl 566 (792)
..+.+.-.. +.+++|||+.+|+.+-++||+ .|++..+. ......+|+++
T Consensus 147 ~~~~~g~~p-~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 197 (218)
T PRK11587 147 GAQLLGLAP-QECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL 197 (218)
T ss_pred HHHHcCCCc-ccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe
Confidence 444444444 778999999999999999998 46665332 22234577766
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0015 Score=69.91 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=79.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.||+.++++.|+++|+++.++|+.....+..+-+.+|+.. +.++.+++... ..-.|+--.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~----------------~KP~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR----------------GKPDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC----------------CCCCHHHHH
Confidence 467999999999999999999999999999999999999853 12222221110 011233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCCcHH-HHhhcCEEeccCCchHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSGASV-AKDLADIILLEKDLNVL 574 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~~~-~~~~ad~vl~~~~~~~i 574 (792)
..++.+.-.. +.++++||+.+|+.+-+.|++- |++..+.+. ....+|+++ +++..+
T Consensus 280 ~A~~~lgl~P-eecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 280 YAAQLLNFIP-ERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHcCCCc-ccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 4455554445 7799999999999999999994 334432222 123478776 445443
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0012 Score=66.33 Aligned_cols=98 Identities=13% Similarity=0.180 Sum_probs=67.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|++++++|+.+...+....+++|+.. +.++.+.+... .+-.|+--.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------------~KP~~~~~~ 157 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV----------------EKPHPKIFY 157 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC----------------CCCCHHHHH
Confidence 578999999999999999999999999888888889998853 11111111100 011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCe-eEEec
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANV-GISVD 552 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~v-gia~~ 552 (792)
.+.+.+.-.. +.+++|||+. +|+.+-++||+ .|.+.
T Consensus 158 ~~~~~~~~~~-~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 158 AALKRLGVKP-EEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHcCCCh-hhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 3333333333 6789999997 99999999998 55554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0013 Score=63.20 Aligned_cols=98 Identities=16% Similarity=0.088 Sum_probs=60.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHhCCCCCccc---cchhhhccCHHHHHHhhhcceEE
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLS--------LAIKICHEVGIRTTHVS---TGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~--------~a~~ia~~~gi~~~~~~---~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
++-|++++++++|++.|+++.++|+.... ......+..|+..-... .+++.. .
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----------------~ 91 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCE----------------C 91 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCC----------------C
Confidence 36899999999999999999999987642 22333445666431000 000000 0
Q ss_pred EEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEec
Q 045750 507 ARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVD 552 (792)
Q Consensus 507 ~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~ 552 (792)
.+-.|+--.++++.+.... +.+++|||+.+|+.+-++|++- |++.
T Consensus 92 ~KP~p~~~~~~~~~l~~~p-~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDL-TQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred CCCCHHHHHHHHHHcCCCH-HHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 1112222344444444333 6789999999999999999994 4443
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.001 Score=66.85 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=67.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeCh--h
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTP--T 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~ 512 (792)
-++.|++.+.++.|+++|+++.++|+.+...+....+.+|+.. +.++.+.+. ....| +
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP~p~ 153 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKEDQR 153 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCCCHH
Confidence 3678999999999999999999999999888888888888742 111111111 00112 1
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee--EEecCC
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG--ISVDSG 554 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg--ia~~~~ 554 (792)
-=....+.+.-.. +.+++|||+.+|+.+-++||+. +++.++
T Consensus 154 ~~~~~~~~~~~~p-~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 154 LWQAVAEHTGLKA-ERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHcCCCh-HHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 1122233333333 6789999999999999999996 445443
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00075 Score=66.48 Aligned_cols=92 Identities=17% Similarity=0.138 Sum_probs=65.1
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
.+++.+++.++++.|+++|+++.++||.....+..+.+.+|+... .++.+.+ +..+-.|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 345677789999999999999999999999999999999998531 1111111 011222443
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhC
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAA 545 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A 545 (792)
-..+++.+.-.. +.+++|||+.+|+.+-++|
T Consensus 167 ~~~~~~~~~~~~-~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVEA-CHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcCc-ccEEEEeCCHHHHHHHHhC
Confidence 345555555445 6789999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0031 Score=57.52 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=65.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDS--------LSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR 508 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~--------~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 508 (792)
.++.|++.++++.|+++|++++++|+.. ......+.+++|+.......... ..+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~------------------~~K 85 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACPH------------------CRK 85 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECCC------------------CCC
Confidence 4678999999999999999999999999 77888889999885321110000 001
Q ss_pred eChhhHHHHHHHHh-hcCCCEEEEEcC-CcccHHHHHhCCee
Q 045750 509 LTPTQKLRVVQSLQ-SVGKHVVGFLGD-GINDSLALDAANVG 548 (792)
Q Consensus 509 ~~p~~K~~iv~~l~-~~~~~~v~~iGD-g~ND~~~l~~A~vg 548 (792)
-.|+--..+.+.++ -.. +.+++||| ..+|+.+-+++|+-
T Consensus 86 P~~~~~~~~~~~~~~~~~-~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDP-EESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CChHHHHHHHHHcCCCCh-hheEEEcCCCcccHHHHHHCCCe
Confidence 11222234445442 333 67899999 69999999999884
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0024 Score=62.90 Aligned_cols=95 Identities=15% Similarity=0.192 Sum_probs=66.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+++++|+++|+++.++|+-+........+++|+.. +.++++.+... .+-.|+-=.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~----------------~KP~~~~~~ 155 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA----------------YKPAPQVYQ 155 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC----------------CCCCHHHHH
Confidence 468999999999999999999999999999999999999842 12222211100 011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
.+.+.+.-.. +.+++|||+.+|+.+-++||+-.
T Consensus 156 ~~~~~~~~~p-~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 156 LALEALGVPP-DEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHhCCCh-hhEEEEeCCHHHHHHHHHCCCcE
Confidence 3444444344 67889999999999999999853
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.016 Score=62.05 Aligned_cols=63 Identities=22% Similarity=0.158 Sum_probs=47.0
Q ss_pred hHHHHHHHHhhcCC---C---EEEEEcCCcccHHHHHh-----CCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 513 QKLRVVQSLQSVGK---H---VVGFLGDGINDSLALDA-----ANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 513 ~K~~iv~~l~~~~~---~---~v~~iGDg~ND~~~l~~-----A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
+|...++.+.+..+ . .++++||+.||.+||+. +++||+|+++.... .|++.+ ++...|.+.++
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L--~dp~eV~~~L~ 374 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSL--RDPSEVMEFLK 374 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEc--CCHHHHHHHHH
Confidence 78888887766421 1 24899999999999996 69999999866433 578877 56777766664
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0031 Score=65.91 Aligned_cols=112 Identities=17% Similarity=0.101 Sum_probs=71.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC---CC-ccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR---TT-HVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~---~~-~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
++.|++.+.++.|++.|+++.++|+.+......+-+..+.. .. .++.+.+.. ..+-.|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 57899999999999999999999999988888776665321 10 011111100 01112223
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe-cCC--cHHHHhhcCEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-DSG--ASVAKDLADIIL 566 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~-~~~--~~~~~~~ad~vl 566 (792)
-..+.+.+.-.. +.+++|||+.+|+.+-++||+.... ..+ .......+|+++
T Consensus 208 ~~~a~~~~~~~p-~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi 262 (286)
T PLN02779 208 YNLAAETLGVDP-SRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF 262 (286)
T ss_pred HHHHHHHhCcCh-HHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE
Confidence 344445554444 6788999999999999999985543 222 211123578877
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.007 Score=58.62 Aligned_cols=127 Identities=21% Similarity=0.186 Sum_probs=71.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhc
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSL---------------SLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKR 502 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~---------------~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~ 502 (792)
.+.|++.+++++|+++|+++.++|+.+. .....+.++.|+....++....... +
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~--~--------- 97 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPE--D--------- 97 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCC--C---------
Confidence 4679999999999999999999998763 1122233445542111111000000 0
Q ss_pred ceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCCc--H-HHHhhc--CEEeccCCchHHHH
Q 045750 503 ATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSGA--S-VAKDLA--DIILLEKDLNVLVA 576 (792)
Q Consensus 503 ~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~--~-~~~~~a--d~vl~~~~~~~i~~ 576 (792)
..-..+-.|+--....+.+.-.. +.+++|||+.+|+.+-++||+. |++..+. . .....+ |+++ +++..+.+
T Consensus 98 ~~~~~KP~p~~~~~~~~~l~~~~-~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~el~~ 174 (181)
T PRK08942 98 GCDCRKPKPGMLLSIAERLNIDL-AGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLADLPQ 174 (181)
T ss_pred CCcCCCCCHHHHHHHHHHcCCCh-hhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHHHHH
Confidence 00001112333344444444444 7788999999999999999984 3333221 1 122234 7776 45666655
Q ss_pred HH
Q 045750 577 GV 578 (792)
Q Consensus 577 ~i 578 (792)
.+
T Consensus 175 ~l 176 (181)
T PRK08942 175 AL 176 (181)
T ss_pred HH
Confidence 54
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0026 Score=67.31 Aligned_cols=108 Identities=8% Similarity=-0.096 Sum_probs=75.2
Q ss_pred ccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-C-ccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 434 TFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-T-HVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~-~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
...+++.|++.+++++|++.|++++++||++...+..+.+.+|+.. . ..+.|.+. .. ..+... --.+-.|
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~----~~---~~~~~~-~~~kp~p 254 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP----DM---HFQREQ-GDKRPDD 254 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc----hh---hhcccC-CCCCCcH
Confidence 3578999999999999999999999999999999999999998853 1 01111110 00 000000 0013345
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
+-+.+.++.+.....+.++|+||..+|+.+-+.||+-.
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 66677776654322278999999999999999999963
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0043 Score=59.06 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=74.7
Q ss_pred cEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceE
Q 045750 427 MVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGD-SLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATV 505 (792)
Q Consensus 427 l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd-~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v 505 (792)
........-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+.....- ..+.+.+. ..+
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~----------~~~~~~Fd-~iv 102 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT----------VPMHSLFD-DRI 102 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc----------ccHHHhce-eee
Confidence 3455666666788999999999999999999999987 88899999999998511000 00000000 112
Q ss_pred EEEeChhhH--HHHHHHHhhc-----CCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 506 LARLTPTQK--LRVVQSLQSV-----GKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 506 ~~~~~p~~K--~~iv~~l~~~-----~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
.++..+..| .++.+.+.+. ..+.++++||+..|+.+-++|++-+..
T Consensus 103 ~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 103 EIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 222111122 2345555432 126799999999999999999996554
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0016 Score=63.29 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=59.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+... +....+.+|+.. +.++++.+.. ..+-.|+-=.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIK----------------KGKPDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcC----------------CCCCChHHHH
Confidence 5789999999999999999999997543 456778888742 1111111110 0111222223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
...+.+.-.. +.+++|||+.+|+.+-+.||+.
T Consensus 149 ~~~~~~~~~~-~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 149 AAAEGLGVSP-SECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHcCCCH-HHeEEEecCHHHHHHHHHcCCE
Confidence 3333333333 5688999999999999999984
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0019 Score=59.56 Aligned_cols=107 Identities=10% Similarity=0.115 Sum_probs=76.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC----CCCCccccchhhhccCHHHHHHhhhcceEEE--EeCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG----IRTTHVSTGPDLELLSQESFHERVKRATVLA--RLTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~g----i~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~--~~~p 511 (792)
.++|+.++.++.+++.+++++++|+....-...+-.+.+ +....++++......+. ....+.. ..--
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg-------~h~i~~~~ds~fG 145 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDG-------QHSIKYTDDSQFG 145 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCC-------ceeeecCCccccC
Confidence 578999999999999999999999999999999888877 43222222222111110 0000111 1113
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
.+|...++.+++.. +.+.++|||+.|+++-+.+|+-.|-.
T Consensus 146 ~dK~~vI~~l~e~~-e~~fy~GDsvsDlsaaklsDllFAK~ 185 (220)
T COG4359 146 HDKSSVIHELSEPN-ESIFYCGDSVSDLSAAKLSDLLFAKD 185 (220)
T ss_pred CCcchhHHHhhcCC-ceEEEecCCcccccHhhhhhhHhhHH
Confidence 57999999999998 88999999999999988888877653
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0019 Score=61.95 Aligned_cols=97 Identities=19% Similarity=0.245 Sum_probs=69.8
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC--CCccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR--TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
..++.|++.+.++.|+++|++++++|+..........+++|+. .+.++.+.+.... +-.|+-
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~----------------Kp~~~~ 138 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR----------------KPDPDA 138 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS----------------TTSHHH
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh----------------hhHHHH
Confidence 3457899999999999999999999999999999999999986 2222222221110 011223
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
=..+++.+.-.. ..+++|||+..|+.+-++||+.-
T Consensus 139 ~~~~~~~~~~~p-~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 139 YRRALEKLGIPP-EEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHTSSG-GGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHcCCCc-ceEEEEeCCHHHHHHHHHcCCeE
Confidence 344555554444 67899999999999999999853
|
... |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0065 Score=58.56 Aligned_cols=128 Identities=24% Similarity=0.164 Sum_probs=66.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcc
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLS---------------LAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRA 503 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~---------------~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~ 503 (792)
+.|++.++|++|+++|+++.++|.-+.. ....+..+.|+.-..++.......-. ..+. ..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~~~----~~ 101 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGV-EEFR----QV 101 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCccc-cccc----CC
Confidence 5789999999999999999999987741 11223333343211111000000000 0000 00
Q ss_pred eEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE--EecCCcH---HHHhhcCEEeccCCchHH
Q 045750 504 TVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI--SVDSGAS---VAKDLADIILLEKDLNVL 574 (792)
Q Consensus 504 ~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi--a~~~~~~---~~~~~ad~vl~~~~~~~i 574 (792)
.-..+-.|+--....+.+.-.. +.++||||..+|+.+-++|++.. .+..+.. .....+|+++ +++..+
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~-~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDM-AQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcCh-hhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--ccHHHh
Confidence 0000111222233333333333 67889999999999999999953 4433321 1223478887 344443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0045 Score=62.23 Aligned_cols=119 Identities=12% Similarity=0.091 Sum_probs=75.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++++++. ++++++|+........+.+++|+.. +.++.+.+... .+-.|+--.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~~~~~~ 159 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI----------------QKPDKEIFN 159 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC----------------CCCCHHHHH
Confidence 5789999999999999 9999999999999999999999843 11111111000 011122223
Q ss_pred HHHHHH-hhcCCCEEEEEcCCc-ccHHHHHhCCe-eEEecC--CcHHHHhhcCEEeccCCchHHHH
Q 045750 516 RVVQSL-QSVGKHVVGFLGDGI-NDSLALDAANV-GISVDS--GASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 516 ~iv~~l-~~~~~~~v~~iGDg~-ND~~~l~~A~v-gia~~~--~~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
..++.+ .-.. +.+++|||+. +|+.+-+.+|+ +|.+.. .++.....+++++ +++..+..
T Consensus 160 ~~~~~~~~~~~-~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 160 YALERMPKFSK-EEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHhcCCCc-hheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 334444 3233 6788999998 89999999998 444432 2222223456665 45555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0099 Score=58.82 Aligned_cols=83 Identities=24% Similarity=0.264 Sum_probs=60.2
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe-C-
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSL---AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL-T- 510 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~---a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-~- 510 (792)
.-|.-|++.++++.++++|++|+++|||.... +..--++.|++... .++-|. .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~----------------------~LiLR~~~d 175 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWK----------------------HLILRGLED 175 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcC----------------------eeeecCCCC
Confidence 45889999999999999999999999999866 44444567775310 122222 1
Q ss_pred -----hhhHHHHHHHHhhcCCCEEEEEcCCcccHH
Q 045750 511 -----PTQKLRVVQSLQSVGKHVVGFLGDGINDSL 540 (792)
Q Consensus 511 -----p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~ 540 (792)
..-|.+.-+.+.+.|-.+++.+||..+|..
T Consensus 176 ~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 176 SNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 112777777777777578888999999973
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0079 Score=57.28 Aligned_cols=37 Identities=19% Similarity=0.306 Sum_probs=33.9
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
.+...+.+|+++|++|+.+|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 3677899999999999999999999999999999984
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0087 Score=61.07 Aligned_cols=64 Identities=22% Similarity=0.195 Sum_probs=45.6
Q ss_pred hhhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhC--------CeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 511 PTQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAA--------NVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 511 p~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A--------~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
+.+|...++.+.+.. ...++++||+.||.+|++.+ +.+|+|+.+ ..+..|++++ ++...+.+.+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~--~~~~~v~~~L 239 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHL--TGPQQVLEFL 239 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeC--CCHHHHHHHH
Confidence 346776666665542 14789999999999999999 578888633 2456789988 4666666655
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0039 Score=60.58 Aligned_cols=91 Identities=19% Similarity=0.159 Sum_probs=61.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChh--
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPT-- 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~-- 512 (792)
-++.|++.++++.|++.|+++.++|+. ..+..+.+++|+.. +.++.+.+. .+..|.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~------------------~~~kp~~~ 146 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEV------------------KEGKPHPE 146 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhC------------------CCCCCChH
Confidence 467999999999999999999999998 56777888888742 111111110 011121
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
--....+.+.... +.+++|||+.+|+.+-++||+.
T Consensus 147 ~~~~~~~~~~~~~-~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVSP-NECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCCH-HHeEEEeCcHhhHHHHHHCCCe
Confidence 1122333333223 5688999999999999999885
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.026 Score=67.49 Aligned_cols=50 Identities=12% Similarity=0.077 Sum_probs=38.1
Q ss_pred CcEEEEecccCCCCChhHHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHHh
Q 045750 426 DMVFLGLITFYDPPKDSAKQALWRL-AKKGVKAKLLTGDSLSLAIKICHEV 475 (792)
Q Consensus 426 ~l~~lG~i~~~d~~r~~~~~~I~~l-~~~Gi~v~~~Tgd~~~~a~~ia~~~ 475 (792)
|++++-.....-.+.+++.+++++| ++.|+.|+++|||...+.......+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4444433222346778999999997 7889999999999999999887543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0067 Score=58.72 Aligned_cols=93 Identities=23% Similarity=0.217 Sum_probs=62.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|++++++|+..... ..+..++|+.. +.++.+.+.. ..+-.|+--.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999888 66656688742 1111111100 0011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
.+.+.+.... ..++++||+..|+.+-+++|+-
T Consensus 148 ~~~~~~~~~~-~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 148 LALKKLGLKP-EECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHcCCCc-ceEEEEcCCHHHHHHHHHcCCE
Confidence 3444444344 7789999999999999999883
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.02 Score=58.79 Aligned_cols=47 Identities=19% Similarity=0.336 Sum_probs=36.9
Q ss_pred EecccCCC----CChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCC
Q 045750 431 GLITFYDP----PKDSAKQALWRLAKKGVKAKLLTGDSLSL---AIKICHEVGI 477 (792)
Q Consensus 431 G~i~~~d~----~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~---a~~ia~~~gi 477 (792)
|++.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 44444555 88999999999999999999999977765 4445566787
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0087 Score=60.22 Aligned_cols=118 Identities=18% Similarity=0.158 Sum_probs=74.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe----Ch--
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL----TP-- 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~----~p-- 511 (792)
++.|++.++++.|+ +|+++.++|+.....+...-+++|+... + ...+.+.. .|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~-------------------f-d~v~~~~~~~~~KP~p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY-------------------F-DLLVISEQVGVAKPDV 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH-------------------c-CEEEEECccCCCCCCH
Confidence 46899999999999 6899999999998888888888888420 0 00122211 12
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCee-EEec-CCcH-HHHhhcCEEeccCCchHHHHHH
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVG-ISVD-SGAS-VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vg-ia~~-~~~~-~~~~~ad~vl~~~~~~~i~~~i 578 (792)
+-=..+++.+.-...+.+++|||+. +|+.+-++||+. |.+. .+.. .....+|+++ +++..+.+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 1112233333221125789999998 799999999985 4444 2211 1112467776 5566665544
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0075 Score=65.72 Aligned_cols=112 Identities=18% Similarity=0.169 Sum_probs=72.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH-EVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~-~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.. +.++++++.. ..+-.|+--
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~----------------~~KP~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE----------------KGKPSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC----------------CCCCCHHHH
Confidence 467999999999999999999999999888877665 677732 1222221110 011122333
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCC--cHHHHhhcCEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSG--ASVAKDLADIIL 566 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~--~~~~~~~ad~vl 566 (792)
..+++.+.-.. +.+++|||+.+|+.+-++||+. |++..+ .......+|.++
T Consensus 157 ~~a~~~lgv~p-~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 157 LEAAKRLNVEP-SNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHcCCCh-hHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 34444444444 6789999999999999999985 444432 222233456655
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.019 Score=58.59 Aligned_cols=86 Identities=21% Similarity=0.171 Sum_probs=60.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSL---AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~---a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
..++-|++.+.++.+++.|+++.++|++.... +....++.|++... ...++.+-...
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--------------------~d~lllr~~~~ 175 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--------------------EEHLLLKKDKS 175 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--------------------cceEEeCCCCC
Confidence 45678999999999999999999999998543 34556778885310 00144443334
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLAL 542 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l 542 (792)
.|..-.+.+.+.. ..++++||..+|....
T Consensus 176 ~K~~rr~~I~~~y-~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 176 SKESRRQKVQKDY-EIVLLFGDNLLDFDDF 204 (266)
T ss_pred CcHHHHHHHHhcC-CEEEEECCCHHHhhhh
Confidence 5666666666655 7899999999998654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0099 Score=55.33 Aligned_cols=97 Identities=19% Similarity=0.170 Sum_probs=60.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCccccchhh-hccCHHHHHHhhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSL---------------SLAIKICHEVGIRTTHVSTGPDL-ELLSQESFHERVK 501 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~---------------~~a~~ia~~~gi~~~~~~~g~~~-~~~~~~~~~~~~~ 501 (792)
++.|++.++++.|+++|+++.++|+.+. ..+..+.+++|+.....+..... ..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~----------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPAD----------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCC-----------
Confidence 4789999999999999999999998763 45566778888752110000000 00
Q ss_pred cceEEEEeCh--hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 502 RATVLARLTP--TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 502 ~~~v~~~~~p--~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
......| +-=..+++.+.-.. +.+++|||...|+.+-+.+++-.
T Consensus 96 ---~~~~~KP~~~~~~~~~~~~~~~~-~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 96 ---NCSCRKPKPGLILEALKRLGVDA-SRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCCh-HHEEEEcCCHHHHHHHHHCCCCE
Confidence 0000012 11122333333233 67899999999999999999843
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.011 Score=56.39 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=63.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeCh--hh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDS-LSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTP--TQ 513 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~-~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~~ 513 (792)
..+-|++.++++.|++.|++++++|+.+ ...+..+.+.+|+.. .+....| +-
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~-------------------------~~~~~KP~p~~ 96 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV-------------------------LPHAVKPPGCA 96 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------------------------EcCCCCCChHH
Confidence 3678999999999999999999999988 677788888888742 1111122 22
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCe-eEEec
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGI-NDSLALDAANV-GISVD 552 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~v-gia~~ 552 (792)
-..+.+.+.... +.+++|||.. .|+.+-+.||+ +|.+.
T Consensus 97 ~~~~l~~~~~~~-~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 97 FRRAHPEMGLTS-EQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred HHHHHHHcCCCH-HHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 223333333233 6699999998 79999999998 44443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0097 Score=59.68 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=59.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHhCCCC--Cccccch--hhhccCHHHHHHhhhcceEEEEeChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK-ICHEVGIRT--THVSTGP--DLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~-ia~~~gi~~--~~~~~g~--~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
++.|++.++|+.|++.|+++.++||-....... ..+..|+.. ..++++. +.. ..+-.|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhcc----------------CCCCCcH
Confidence 568999999999999999999999987654332 222233321 1111111 000 0011222
Q ss_pred hHHHHHHHHh---hcCCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 513 QKLRVVQSLQ---SVGKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 513 ~K~~iv~~l~---~~~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
--...++.+. -.. +.+++|||+..|+.+-++||+...
T Consensus 142 ~~~~a~~~~~~~~~~~-~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 142 IFLAAARRFEDGPVDP-GKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred HHHHHHHHhCCCCCCc-cceEEEeccHhhHHHHHHCCCeEE
Confidence 2334444443 223 678999999999999999999433
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0097 Score=56.15 Aligned_cols=98 Identities=19% Similarity=0.196 Sum_probs=60.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhc
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDS---------------LSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKR 502 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~---------------~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~ 502 (792)
++-|++.+++++|+++|++++++|... ...+..+.+.+|+.-..++.+..... +
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~--~--------- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPD--D--------- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCC--C---------
Confidence 467899999999999999999999853 44566677778875211111100000 0
Q ss_pred ceEEEEeChhhHHHHHHHHhh-cC--CCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 503 ATVLARLTPTQKLRVVQSLQS-VG--KHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 503 ~~v~~~~~p~~K~~iv~~l~~-~~--~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
.. ....| |.+++..+.+ .+ .+.+.+|||+.+|+.+-++|++...
T Consensus 98 -~~-~~~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 -NC-DCRKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -CC-CCCCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00 00012 2233333222 21 2568899999999999999999544
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.006 Score=56.86 Aligned_cols=94 Identities=9% Similarity=-0.061 Sum_probs=64.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---THVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
-++||++.+.++.|+ .++++.++|+-+...+..+.+.+|+.. ..++++++... ..|.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~------------------~KP~- 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF------------------VKGK- 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc------------------cCCe-
Confidence 357999999999999 579999999999999999999998842 22222222111 1121
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
-.+.++.+.... +.+++|||..+|+.+-+++++-|..
T Consensus 104 ~~k~l~~l~~~p-~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 104 YVKDLSLLGRDL-SNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred EeecHHHcCCCh-hcEEEEECCHHHhhcCccCEEEecC
Confidence 111223333334 7899999999999987777666543
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.035 Score=56.53 Aligned_cols=47 Identities=21% Similarity=0.321 Sum_probs=40.9
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---hCC
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE---VGI 477 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~---~gi 477 (792)
|++.-.+.+-|++.+++++|+++|++++++|++...+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 55666778899999999999999999999999999888887776 466
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.023 Score=52.15 Aligned_cols=110 Identities=15% Similarity=0.231 Sum_probs=77.7
Q ss_pred HHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 045750 390 GEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAI 469 (792)
Q Consensus 390 ~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~ 469 (792)
.+.+..+|.+.+.+=..+ ++++. =..+..|++++-+.+++++|++++++|..++..+.
T Consensus 20 ~~~L~~~Gikgvi~DlDN--------------------TLv~w--d~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~ 77 (175)
T COG2179 20 PDILKAHGIKGVILDLDN--------------------TLVPW--DNPDATPELRAWLAELKEAGIKVVVVSNNKESRVA 77 (175)
T ss_pred HHHHHHcCCcEEEEeccC--------------------ceecc--cCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHH
Confidence 367788899988763221 22221 13467899999999999999999999999999999
Q ss_pred HHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhH--HHHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCC
Q 045750 470 KICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQK--LRVVQSLQSVGKHVVGFLGDGI-NDSLALDAAN 546 (792)
Q Consensus 470 ~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~ 546 (792)
..++.+|++. ++--..|-.+ .+.++.++-.. +.|+||||.. .|+-+=..||
T Consensus 78 ~~~~~l~v~f-------------------------i~~A~KP~~~~fr~Al~~m~l~~-~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 78 RAAEKLGVPF-------------------------IYRAKKPFGRAFRRALKEMNLPP-EEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred hhhhhcCCce-------------------------eecccCccHHHHHHHHHHcCCCh-hHEEEEcchhhhhhhcccccC
Confidence 9999999973 3322333322 23444444444 7899999984 6877766666
Q ss_pred e
Q 045750 547 V 547 (792)
Q Consensus 547 v 547 (792)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 6
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.041 Score=50.88 Aligned_cols=103 Identities=20% Similarity=0.282 Sum_probs=72.7
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHh-----CCCCCccccchh--hhccCHHHHHHhhhcceE
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK---ICHEV-----GIRTTHVSTGPD--LELLSQESFHERVKRATV 505 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~---ia~~~-----gi~~~~~~~g~~--~~~~~~~~~~~~~~~~~v 505 (792)
.|..++++.+..++++++|++++.+|+|+...+.. ...+. +++..-++...+ +..+..| +
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rE----------v 94 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHRE----------V 94 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhcc----------c
Confidence 36899999999999999999999999999765544 33444 454433332211 1111111 3
Q ss_pred EEEeChhhHHHHHHHHhhc----CCCEEEEEcCCcccHHHHHhCCee
Q 045750 506 LARLTPTQKLRVVQSLQSV----GKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~~----~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
..+-..+.|...++.++.. +....++.|+..+|+.+.+++++.
T Consensus 95 i~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 95 ISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 3444556888888888875 446788899999999999988875
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.19 Score=53.43 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=38.0
Q ss_pred CcEEEEecccCC--CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 045750 426 DMVFLGLITFYD--PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE 474 (792)
Q Consensus 426 ~l~~lG~i~~~d--~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~ 474 (792)
|++++-++.-.| .+.+++.++|++|. +|++++++|||.......+...
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l 168 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKL 168 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcc
Confidence 446665554333 48899999999999 7899999999999999988433
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.057 Score=55.00 Aligned_cols=44 Identities=27% Similarity=0.327 Sum_probs=35.5
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHh-CCeeEEecCCcHH
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGD----GINDSLALDA-ANVGISVDSGASV 557 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGD----g~ND~~~l~~-A~vgia~~~~~~~ 557 (792)
.+|..-++.++ .. +.|+++|| |.||.+||+. --.|+++.+-.+.
T Consensus 188 vnKg~al~~L~-~~-~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~ 236 (245)
T PLN02423 188 WDKTYCLQFLE-DF-DEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDT 236 (245)
T ss_pred CCHHHHHHHhc-Cc-CeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHH
Confidence 47888899998 44 78999999 8999999997 5569999654443
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.019 Score=54.48 Aligned_cols=94 Identities=10% Similarity=-0.011 Sum_probs=59.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLS------------LAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~------------~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
+-|++.+++++|+++|+++.++|..+.. .+..+.+++|+....++.+... ..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~~~----------------~~ 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATHAG----------------LY 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEEEEecCCC----------------CC
Confidence 3489999999999999999999976542 4567788888853222111100 00
Q ss_pred EEeChhhHHHHHHHHh--hcCCCEEEEEcCCc--------ccHHHHHhCCeeE
Q 045750 507 ARLTPTQKLRVVQSLQ--SVGKHVVGFLGDGI--------NDSLALDAANVGI 549 (792)
Q Consensus 507 ~~~~p~~K~~iv~~l~--~~~~~~v~~iGDg~--------ND~~~l~~A~vgi 549 (792)
..-.|+--..+.+.+. -.. +.++||||.. +|+.+-++||+-.
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~-~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKM-TRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCc-hhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0011222233334333 222 6788999986 6999988888754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.023 Score=56.08 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=59.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++-|++.++++.|+++|+++.++|+-... .....+++|+.. +.++.+.+.. ..+-.|+-=.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~----------------~~KP~~~~~~ 167 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG----------------AEKPDPKIFQ 167 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC----------------CCCCCHHHHH
Confidence 57799999999999999999999987654 466777788732 1111111000 0001121122
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCee
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVG 548 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vg 548 (792)
.+++.+.-.. ..+++|||+. +|+.+-++||+-
T Consensus 168 ~~~~~~~~~~-~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 168 EALERAGISP-EEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHcCCCh-hHEEEECCCchHHHHHHHHcCCe
Confidence 2333333333 6789999997 899999998874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.03 Score=55.70 Aligned_cols=99 Identities=16% Similarity=0.116 Sum_probs=66.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC---CCCCccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG---IRTTHVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~g---i~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
+-++.|++.+++++|+++|+++.++|..+......+.+..+ +.. .+++ .+. ..+...-.|+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~--~f~~-------------~fd-~~~g~KP~p~ 156 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP--YFSG-------------YFD-TTVGLKTEAQ 156 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh--hcce-------------EEE-eCcccCCCHH
Confidence 45789999999999999999999999998887777766653 211 0000 000 0111122333
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
-=..+.+.+.-.. +.++++||...|+.+-++||+-...
T Consensus 157 ~y~~i~~~lgv~p-~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 157 SYVKIAGQLGSPP-REILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred HHHHHHHHhCcCh-hHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 3345555555444 6789999999999999999996543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.033 Score=50.36 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=58.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeC--hhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGD-SLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT--PTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd-~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K 514 (792)
++.|++.+.++.|+++|+++.++|+. ....+..+.+..|. ...+. + + .+.++.. +.++.. |+.=
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~-~~~i~-~--l----~~~f~~~-----~~~~~~pkp~~~ 95 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED-FGIIF-P--L----AEYFDPL-----TIGYWLPKSPRL 95 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc-cccch-h--h----Hhhhhhh-----hhcCCCcHHHHH
Confidence 68999999999999999999999999 78777777777761 00000 0 0 0001110 111111 2322
Q ss_pred HHHHHHHh--hcCCCEEEEEcCCcccHHHHHh
Q 045750 515 LRVVQSLQ--SVGKHVVGFLGDGINDSLALDA 544 (792)
Q Consensus 515 ~~iv~~l~--~~~~~~v~~iGDg~ND~~~l~~ 544 (792)
..+++.+. -.. +.++++||...|...++.
T Consensus 96 ~~a~~~lg~~~~p-~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 96 VEIALKLNGVLKP-KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHhcCCCCc-ceEEEECCCHhHHHHHHh
Confidence 34444444 333 789999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.073 Score=54.22 Aligned_cols=91 Identities=16% Similarity=0.206 Sum_probs=60.7
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceE
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAI--KICHEVGIRT---THVSTGPDLELLSQESFHERVKRATV 505 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~--~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v 505 (792)
|.+.-...+-|++++++++|+++|+++.++|........ ...+++|+.. +.+++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~----------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEI----------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHH-----------------
Confidence 555567788999999999999999999999997665444 5668888863 121221111
Q ss_pred EEEeChhhHHHHHHHHhh---cCCCEEEEEcCCcccHHHHHhCC
Q 045750 506 LARLTPTQKLRVVQSLQS---VGKHVVGFLGDGINDSLALDAAN 546 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~---~~~~~v~~iGDg~ND~~~l~~A~ 546 (792)
....+.+.+++ .+ ..+.++||+.+|...+..++
T Consensus 80 -------~~~~l~~~~~~~~~~~-~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -------AVQMILESKKRFDIRN-GIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -------HHHHHHhhhhhccCCC-ceEEEeCCcccchhhhcCCC
Confidence 11122222222 23 67899999999998886544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.029 Score=52.55 Aligned_cols=88 Identities=22% Similarity=0.212 Sum_probs=56.2
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLR 516 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 516 (792)
..+++.+.++.|+++|+++.++|+.....+....+.. +.. ..++...+ +..+-.|+--..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~~Kp~~~~~~~ 126 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FGAKPEPEIFLA 126 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CCCCcCHHHHHH
Confidence 3478999999999999999999999999998887775 321 11110000 000111222222
Q ss_pred HHHHHhhcCCCEEEEEcCCcccHHHHHhCC
Q 045750 517 VVQSLQSVGKHVVGFLGDGINDSLALDAAN 546 (792)
Q Consensus 517 iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~ 546 (792)
+.+.+.- .. .+++|||+.+|+.+-++|+
T Consensus 127 ~~~~~~~-~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 127 ALESLGL-PP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHcCC-CC-CEEEEeCCHHHHHHHHHcc
Confidence 2232222 22 6889999999999988775
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.073 Score=65.71 Aligned_cols=127 Identities=14% Similarity=0.078 Sum_probs=81.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC-C--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR-T--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~-~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.+-|++.+.++.|+++|+++.++|+.....+....+++|+. . +.++.+.+... .+-.|+--
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~----------------~KP~Pe~~ 224 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN----------------LKPAPDIF 224 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc----------------CCCCHHHH
Confidence 35799999999999999999999999999999999999985 1 22222221110 01122333
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCC---cHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSG---ASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~---~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
....+.+.-.. +.+++|||..+|+.+-++|++ .|++..+ .+.....+|+++.+-..-.+..++..|
T Consensus 225 ~~a~~~lgv~p-~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~ 294 (1057)
T PLN02919 225 LAAAKILGVPT-SECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGG 294 (1057)
T ss_pred HHHHHHcCcCc-ccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcC
Confidence 34445554444 678899999999999999999 4445422 233344677777432222244444433
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.062 Score=46.22 Aligned_cols=90 Identities=21% Similarity=0.258 Sum_probs=56.4
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCCCCccccchhhhccCHHHHHHhhhcceEEE
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC---HEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia---~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
|++...+++=|++.++|+.|+++|++++++|.....+...++ +++|++... ..++.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~---------------------~~i~t 65 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE---------------------DEIIT 65 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G---------------------GGEEE
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc---------------------CEEEC
Confidence 556668889999999999999999999999998865554444 567775210 00221
Q ss_pred EeChhhHHHHHHHHhh-cCCCEEEEEcCCcccHHHHHhCCe
Q 045750 508 RLTPTQKLRVVQSLQS-VGKHVVGFLGDGINDSLALDAANV 547 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~-~~~~~v~~iGDg~ND~~~l~~A~v 547 (792)
|. ....+.+++ .+...|.++|.. .....++.+|+
T Consensus 66 ---s~--~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 66 ---SG--MAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp ---HH--HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred ---hH--HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 11 123344444 333789999975 66667777664
|
... |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.078 Score=56.53 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=60.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGD---------------SLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVK 501 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd---------------~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~ 501 (792)
-++.|++.+++++|+++|++++++|+- ....+..+.+..|+....++-+.... .++
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~--sd~------- 99 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFP--EDN------- 99 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcC--ccc-------
Confidence 477899999999999999999999984 23345566677776421111000000 000
Q ss_pred cceEEEEeChhhHHHHHHHH-hhc--CCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 502 RATVLARLTPTQKLRVVQSL-QSV--GKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 502 ~~~v~~~~~p~~K~~iv~~l-~~~--~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
..+ ..-|..++..+ ++. ....+.||||+.+|..+-+.|++...
T Consensus 100 ---~~~---rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 100 ---CSC---RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ---CCC---CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 000 11122233222 222 12678899999999999999999543
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.027 Score=56.56 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=63.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC---ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.++++.| ++++.++|+.....+...-+++|+... .++++.+... .+-.|+--
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~----------------~KP~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR----------------WKPDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC----------------CCCChHHH
Confidence 4568999999998 499999999998888888888888531 2222222110 01122333
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
....+.+.-.. +.+++|||+.+|+.+-++||+.+..
T Consensus 149 ~~a~~~~~~~p-~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 149 FHAAEAMNVNV-ENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHcCCCH-HHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 33444444333 6688999999999999999997653
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.072 Score=52.30 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=58.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
++.|++.+++++|++.+ +.+++|..+.......-+.+|+.... . ..+ ...+.++..+ .|.++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f--~-------------~~f-~~i~~~~~~~-~kp~~ 135 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF--P-------------GAF-SEVLMCGHDE-SKEKL 135 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC--C-------------Ccc-cEEEEeccCc-ccHHH
Confidence 46899999999999985 56677776555544455666663100 0 000 0012222222 23343
Q ss_pred HH-HHhhcCCCEEEEEcCCcccHHHHHhC--Cee-EEecCC
Q 045750 518 VQ-SLQSVGKHVVGFLGDGINDSLALDAA--NVG-ISVDSG 554 (792)
Q Consensus 518 v~-~l~~~~~~~v~~iGDg~ND~~~l~~A--~vg-ia~~~~ 554 (792)
+. .+++.+.+.+++|||..+|+.+-++| |+- |.+..+
T Consensus 136 ~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 136 FIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred HHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecch
Confidence 33 33333335688999999999999999 994 344444
|
2 hypothetical protein; Provisional |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.14 Score=48.06 Aligned_cols=90 Identities=19% Similarity=0.158 Sum_probs=69.8
Q ss_pred CCCCChhHHHHHHHHHhCCCe--EEEEcCC-------CHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE
Q 045750 436 YDPPKDSAKQALWRLAKKGVK--AKLLTGD-------SLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~--v~~~Tgd-------~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
++++.|+..+.+++|++.+.. ++++|.. +...|..+.+.+|++ ++
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--------------------------vl 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--------------------------VL 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--------------------------EE
Confidence 678899999999999999874 9999997 489999999999986 33
Q ss_pred E--EeChhhHHHHHHHHhhc----CCCEEEEEcCCc-ccHHHHHhCC-eeEEe
Q 045750 507 A--RLTPTQKLRVVQSLQSV----GKHVVGFLGDGI-NDSLALDAAN-VGISV 551 (792)
Q Consensus 507 ~--~~~p~~K~~iv~~l~~~----~~~~v~~iGDg~-ND~~~l~~A~-vgia~ 551 (792)
. ...|.-..++.+.++.+ ..+.+++|||-. .|+-|=...| .+|=+
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv 163 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILV 163 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEE
Confidence 2 34676677888888765 127899999984 6877765555 34433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.043 Score=54.58 Aligned_cols=96 Identities=19% Similarity=0.084 Sum_probs=58.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE----eC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSL--AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR----LT 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~--a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~----~~ 510 (792)
-++.|++.++++.|+++|+++.++|+..... ........|+.. .+.. .+.+. ..
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~-------------------~fd~-v~~s~~~~~~K 152 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMA-------------------LFDA-VVESCLEGLRK 152 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHh-------------------hCCE-EEEeeecCCCC
Confidence 4678999999999999999999999875432 222222233311 0100 11111 11
Q ss_pred h--hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecC
Q 045750 511 P--TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDS 553 (792)
Q Consensus 511 p--~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~ 553 (792)
| +--..+.+.+.-.. +.+++|||...|+.+-++||+- |.+.+
T Consensus 153 P~p~~~~~~~~~~g~~~-~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAP-EECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred CCHHHHHHHHHHcCCCH-HHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 2 22223334443333 5688899999999999999994 44433
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.12 Score=51.74 Aligned_cols=102 Identities=21% Similarity=0.242 Sum_probs=68.2
Q ss_pred CCChhHHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeCh-h
Q 045750 438 PPKDSAKQALWRL--AKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTP-T 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l--~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p-~ 512 (792)
|+.|+.+++++.+ ++.|+.++++|.-+..-...+-+.-|+... .+++++...+-+. .+.-......-|.++.| .
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G-~l~v~pyh~h~C~~C~~Nm 149 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG-RLRVRPYHSHGCSLCPPNM 149 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc-eEEEeCccCCCCCcCCCcc
Confidence 6789999999999 568999999999999999999999999542 3444432211100 00000000012334443 4
Q ss_pred hHHHHHHHHhhc----C--CCEEEEEcCCcccHH
Q 045750 513 QKLRVVQSLQSV----G--KHVVGFLGDGINDSL 540 (792)
Q Consensus 513 ~K~~iv~~l~~~----~--~~~v~~iGDg~ND~~ 540 (792)
=|..+++.+++. | ..+|.+||||.||.-
T Consensus 150 CK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~C 183 (234)
T PF06888_consen 150 CKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFC 183 (234)
T ss_pred chHHHHHHHHHHHhhcCCCcceEEEECCCCCCcC
Confidence 688888887765 2 268999999999954
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.17 Score=51.75 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=40.7
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTG---DSLSLAIKICHEVGIR 478 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tg---d~~~~a~~ia~~~gi~ 478 (792)
|++.-.+.+-|++.++|++|+++|++++++|| +.........+++|++
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445677778999999999999999999996 8888888888899984
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.039 Score=55.36 Aligned_cols=82 Identities=21% Similarity=0.261 Sum_probs=58.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCC-CccccchhhhccCHHHHHHhhhcceEEEEe-C-
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSL---AIKICHEVGIRT-THVSTGPDLELLSQESFHERVKRATVLARL-T- 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~---a~~ia~~~gi~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-~- 510 (792)
++.-|++.+.++.++++|++|+++|||+... +..=.++.|... +. ++.|. .
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~-----------------------l~lr~~~~ 170 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDH-----------------------LILRPDKD 170 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSC-----------------------GEEEEESS
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccch-----------------------hccccccc
Confidence 3566889999999999999999999998762 223345666542 11 22222 1
Q ss_pred ------hhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 045750 511 ------PTQKLRVVQSLQSVGKHVVGFLGDGINDSLA 541 (792)
Q Consensus 511 ------p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~ 541 (792)
...|..-.+.+++.|.++++.+||..+|..-
T Consensus 171 ~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 171 PSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp TSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 2348888888888865788899999999776
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.11 Score=55.44 Aligned_cols=91 Identities=12% Similarity=0.060 Sum_probs=67.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----hCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE----VGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~----~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
++.+++.++++.|+++|++..++|..+...+..+.++ +|+.... ......+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-----------------------~~~~~~~~p 87 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-----------------------DARSINWGP 87 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-----------------------eEEEEecCc
Confidence 3578999999999999999999999999999999888 7774311 111222334
Q ss_pred HHHHH----HHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 514 KLRVV----QSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 514 K~~iv----~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
|.+.+ +.+.-.. ..++++||...|+.+.+++...+.+.
T Consensus 88 k~~~i~~~~~~l~i~~-~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 88 KSESLRKIAKKLNLGT-DSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred hHHHHHHHHHHhCCCc-CcEEEECCCHHHHHHHHHHCCCCccC
Confidence 44433 3333333 77899999999999999988876553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.13 Score=49.31 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=69.7
Q ss_pred CCChhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeCh-hh
Q 045750 438 PPKDSAKQALWRLAKKGV-KAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTP-TQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi-~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p-~~ 513 (792)
|.-|+..++|+.+++.|- .+.++|--|..-...+-+..|+.+ ..+.+++...+-.-.-.-.-.-...-|.++.+ .=
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 678999999999999997 899999999999999999999832 11222211110000000000000011222222 22
Q ss_pred HHHHHHHHhhc----CC--CEEEEEcCCccc-HHHHHhCCeeEEec
Q 045750 514 KLRVVQSLQSV----GK--HVVGFLGDGIND-SLALDAANVGISVD 552 (792)
Q Consensus 514 K~~iv~~l~~~----~~--~~v~~iGDg~ND-~~~l~~A~vgia~~ 552 (792)
|..++..++.. |. +++.++|||.|| +|+++...--+||-
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 55555555442 21 488999999999 67877777777774
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.096 Score=51.54 Aligned_cols=91 Identities=14% Similarity=0.126 Sum_probs=57.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCccccchhhhccCHHHHHHhhhcceEEEEe----Ch-
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE-VGIRTTHVSTGPDLELLSQESFHERVKRATVLARL----TP- 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~-~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~----~p- 511 (792)
++.|++.++++.|+++|+++.++|+-+.........+ .++.. .+. ..+.+.. .|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~-------------------~fd-~v~~s~~~~~~KP~ 143 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRA-------------------AAD-HIYLSQDLGMRKPE 143 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHH-------------------hcC-EEEEecccCCCCCC
Confidence 4689999999999999999999999886654433222 23211 000 0111111 12
Q ss_pred -hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 512 -TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 512 -~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
+-=..+++.+.-.. +.++++||+..|+.+-++||+..
T Consensus 144 p~~~~~~~~~~~~~p-~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 144 ARIYQHVLQAEGFSA-ADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHHcCCCh-hHeEEeCCCHHHHHHHHHcCCEE
Confidence 22223334443334 67889999999999999999954
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.058 Score=48.16 Aligned_cols=51 Identities=10% Similarity=0.095 Sum_probs=40.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHH---------------HHHHHHhCCCCCccccchh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLA---------------IKICHEVGIRTTHVSTGPD 487 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a---------------~~ia~~~gi~~~~~~~g~~ 487 (792)
+++.+++.+++++++++|++++++|||+.... .....+-|++.+.+.-|++
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~kp 88 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGKP 88 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCCC
Confidence 67899999999999999999999999988653 3445566787666666664
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.21 Score=47.50 Aligned_cols=50 Identities=24% Similarity=0.296 Sum_probs=43.5
Q ss_pred EEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HhCC
Q 045750 428 VFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH---EVGI 477 (792)
Q Consensus 428 ~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~---~~gi 477 (792)
.+-|.+..+|..-|++.+++++|++++.+|..+|....++-..+.+ ++|+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4569999999999999999999999999999999888887777665 4566
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.16 Score=53.75 Aligned_cols=97 Identities=16% Similarity=0.081 Sum_probs=61.1
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCCCCccccchhhhccCHHHHHHhhhcceEEE
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC---HEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia---~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
|++--.+.+-|+++++|++|+++|++++++|++...+...++ +++|+... .+ .|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~------------~~---------~I~t 95 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT------------EE---------EIFS 95 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCC------------hh---------hEee
Confidence 555556777899999999999999999999999977666666 56776421 00 0222
Q ss_pred EeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 508 RLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
.. ......++.....+++.|+ ++++..|...++.+++-+.-
T Consensus 96 s~--~~~~~~l~~~~~~~~~~V~-viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 96 SS--FAAAAYLKSINFPKDKKVY-VIGEEGILEELELAGFQYLG 136 (311)
T ss_pred hH--HHHHHHHHhhccCCCCEEE-EEcCHHHHHHHHHCCCEEec
Confidence 21 1122222222211214554 45556789999998876543
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.46 Score=48.08 Aligned_cols=82 Identities=21% Similarity=0.228 Sum_probs=55.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeC--
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC---HEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT-- 510 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia---~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-- 510 (792)
+.|.-|++.+..+.+++.|++++++|||....-.... ++.|..... .++-|..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~----------------------~LiLR~~~D 200 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWE----------------------KLILKDPQD 200 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcc----------------------eeeecCCCC
Confidence 5678899999999999999999999999965332222 345664210 1222221
Q ss_pred ------hhhHHHHHHHHhhcCCCEEEEEcCCcccH
Q 045750 511 ------PTQKLRVVQSLQSVGKHVVGFLGDGINDS 539 (792)
Q Consensus 511 ------p~~K~~iv~~l~~~~~~~v~~iGDg~ND~ 539 (792)
.+.|...-+.+.+.|-++++.+||..+|.
T Consensus 201 ~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 201 NSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred CccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 13355555666666657888999999996
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.18 Score=49.05 Aligned_cols=90 Identities=17% Similarity=0.123 Sum_probs=61.0
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
-|+ .+.++.+++. ++..++|+.....+....+++|+.. +.++++.+... .+-.|+--...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH----------------HKPAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC----------------CCCChHHHHHH
Confidence 344 6899999876 8999999999999999999999853 22222221110 11122333444
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
.+.++... ..+++|||+.+|+.+-++||+-
T Consensus 152 ~~~~~~~~-~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQP-TQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCCH-HHeEEEeccHhhHHHHHHCCCE
Confidence 44444444 5688999999999999999984
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.28 E-value=1.5 Score=46.54 Aligned_cols=63 Identities=21% Similarity=0.181 Sum_probs=43.2
Q ss_pred hHHHHHHHHhhcCC------CEEEEEcCCcccHHHHHhC-----CeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 513 QKLRVVQSLQSVGK------HVVGFLGDGINDSLALDAA-----NVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 513 ~K~~iv~~l~~~~~------~~v~~iGDg~ND~~~l~~A-----~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
+|...++.+.+.-+ ..++++||...|-.||+.. |+||.++.+.. .-.|++.+ ++...+.+.++
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L--~dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSL--QEPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeC--CCHHHHHHHHH
Confidence 67777777665410 2478999999999999853 67777774322 22588888 55667766664
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.22 Score=48.23 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=62.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.+++.+++++|+ .+++++|+.+...+....+++|+.. +.++.+.+...- ..+.+-.|+-=.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~------------~~~~KP~p~~~~ 148 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD------------YLLPKPSPQAYE 148 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc------------cCCCCCCHHHHH
Confidence 47789999999998 4799999999999999999999843 111111111000 000011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
.+++.+.... ..+++|||...|+.+-++||+..
T Consensus 149 ~~~~~~~~~~-~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 149 KALREAGVDP-ERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHhCCCc-cceEEEeCCHHHHHHHHHcCCEE
Confidence 4444444444 67889999999999999998854
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.59 Score=46.78 Aligned_cols=99 Identities=15% Similarity=0.126 Sum_probs=75.1
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
..++.|++.+.++.|+++|+.+.+.|+.....+..+.+.+|+.. ..++++.+... .+=.|+-
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~----------------~KP~Pd~ 147 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR----------------GKPAPDI 147 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------------CCCCCHH
Confidence 35789999999999999999999999999999999999999853 23333333322 1223555
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
=....+.|.-.. ..++++.|+.|.+.+-++||.-+-.
T Consensus 148 yL~Aa~~Lgv~P-~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 148 YLLAAERLGVDP-EECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHcCCCh-HHeEEEecchhHHHHHHHCCCEEEE
Confidence 555566655455 7788999999999999999985443
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.64 E-value=0.51 Score=43.62 Aligned_cols=90 Identities=22% Similarity=0.300 Sum_probs=63.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChh-h
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLS----LAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPT-Q 513 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~----~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~-~ 513 (792)
|++-+++.|..-+++|=.++.+|||.+. .++.+|+.+.|..- ..++|+...|. .
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m---------------------~pv~f~Gdk~k~~ 173 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM---------------------NPVIFAGDKPKPG 173 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC---------------------cceeeccCCCCcc
Confidence 4566889999999999999999999875 44556666666431 12355554441 2
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISV 551 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~ 551 (792)
+..-...+|+++ .-..-||+.||+.+-+.|++ ||-+
T Consensus 174 qy~Kt~~i~~~~--~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 174 QYTKTQWIQDKN--IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred cccccHHHHhcC--ceEEecCCchhhhHHHhcCccceeE
Confidence 233345566666 34578999999999999998 7765
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=90.30 E-value=0.55 Score=48.09 Aligned_cols=50 Identities=14% Similarity=0.136 Sum_probs=43.0
Q ss_pred CC-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--Cccccchhh
Q 045750 439 PK-DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDL 488 (792)
Q Consensus 439 ~r-~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~ 488 (792)
+| |++.+++++|+++|+++.++|+.....+....+++|+.. +.++++.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 56 999999999999999999999999999999999999974 345555444
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=89.84 E-value=2.2 Score=43.07 Aligned_cols=61 Identities=26% Similarity=0.206 Sum_probs=30.4
Q ss_pred EeChhhHHHHHHHHhhcCC------CEEEEEcCCcccHHHHHhC------CeeEEecCCc-HHHHhhcCEEecc
Q 045750 508 RLTPTQKLRVVQSLQSVGK------HVVGFLGDGINDSLALDAA------NVGISVDSGA-SVAKDLADIILLE 568 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~~~~------~~v~~iGDg~ND~~~l~~A------~vgia~~~~~-~~~~~~ad~vl~~ 568 (792)
+..-..|...++.+-+... ..++++||...|-.|++.. +++|-++..+ ..-...|++-+.+
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 3333458888887777642 2689999999999999773 5677777443 3334456665543
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=89.75 E-value=1.7 Score=48.84 Aligned_cols=98 Identities=16% Similarity=0.110 Sum_probs=63.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCccccchhhhccCHHHHHHhhhcceEEEE------eCh
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE-VGIRTTHVSTGPDLELLSQESFHERVKRATVLAR------LTP 511 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~-~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~------~~p 511 (792)
+++++.+.+ ++.|.+ +++|+-...-++.+|++ +|++. ++ |.+++...+ -..-.+ +.-
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~--VI-gTeLev~~~---------G~~TG~i~g~~~c~G 174 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADK--VL-GTELEVSKS---------GRATGFMKKPGVLVG 174 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCE--EE-ecccEECcC---------CEEeeeecCCCCCcc
Confidence 667755544 567754 99999999999999987 89963 11 222211000 001111 234
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
++|.+-++...... ....+.||+.||.+||+.|+-+.+++.
T Consensus 175 e~Kv~rl~~~~g~~-~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 175 DHKRDAVLKEFGDA-LPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHHHHHHHHHhCCC-CceEEEECCccHHHHHHhCCccEEeCC
Confidence 56777776433222 223689999999999999999999975
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=88.57 E-value=70 Score=39.33 Aligned_cols=78 Identities=9% Similarity=0.052 Sum_probs=49.4
Q ss_pred hHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC-eEE
Q 045750 7 ISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH-LVV 85 (792)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~-~~V 85 (792)
+..+-..+.-+...|+.+.++++......- .+|.|||+.. .-|....+...|.+|-|.++++.++ +-+
T Consensus 131 iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~----a~ViR~g~~~-------~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa 199 (902)
T PRK10517 131 MVAISTLLNFIQEARSTKAADALKAMVSNT----ATVLRVINDK-------GENGWLEIPIDQLVPGDIIKLAAGDMIPA 199 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCe----EEEEECCccC-------CCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence 344444555566667777888775433222 2344554321 1267889999999999999998655 556
Q ss_pred EeccccCCCc
Q 045750 86 SQSSLTGESW 95 (792)
Q Consensus 86 des~ltGEs~ 95 (792)
|=-.+.|+..
T Consensus 200 Dg~li~g~~l 209 (902)
T PRK10517 200 DLRILQARDL 209 (902)
T ss_pred eEEEEEcCce
Confidence 7666777653
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.36 E-value=1.1 Score=45.34 Aligned_cols=89 Identities=16% Similarity=0.076 Sum_probs=53.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChh--h
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPT--Q 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~--~ 513 (792)
++-|++.+++++|++. +++.++|..+.. .+..|+.. +.++.+.+. .+..|. -
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~p~~ 168 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPFSDM 168 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCcHHH
Confidence 4668999999999975 899999986654 25566632 011111100 011121 1
Q ss_pred HHHHHHHHhhcCCCEEEEEcCC-cccHHHHHhCCeeEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDG-INDSLALDAANVGISV 551 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg-~ND~~~l~~A~vgia~ 551 (792)
=....+.+.-.. ..+++|||+ ..|+.+-++||+-...
T Consensus 169 ~~~a~~~~~~~~-~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 169 YHLAAEKLNVPI-GEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHcCCCh-hHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 122223333223 678999999 5999999999986543
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=88.27 E-value=0.36 Score=45.58 Aligned_cols=96 Identities=15% Similarity=0.036 Sum_probs=62.1
Q ss_pred ccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe-Chh
Q 045750 434 TFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL-TPT 512 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-~p~ 512 (792)
.+.=..||++.+.+++|.+. +++++.|......|..+.+.++..... ++. +++|- ...
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~-f~~-------------------~l~r~~~~~ 96 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKV-ISR-------------------RLYRESCVF 96 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCE-EeE-------------------EEEccccEE
Confidence 33446799999999999988 999999999999999999999875311 000 11111 000
Q ss_pred hHHHHHHHHhhcC--CCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 513 QKLRVVQSLQSVG--KHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 513 ~K~~iv~~l~~~~--~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
.+..+++.+...| ...|+++||...|..+-+.+++-+.
T Consensus 97 ~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 TNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred eCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 1111333333222 2578899999988877555554433
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=88.01 E-value=76 Score=39.06 Aligned_cols=75 Identities=8% Similarity=0.038 Sum_probs=45.5
Q ss_pred HHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC-eEEEec
Q 045750 10 CLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH-LVVSQS 88 (792)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~-~~Vdes 88 (792)
+...+.-+...++-+.++++..... ...+|.|||+. -.-|....+...|.+|.|.++++.++ +-+|=-
T Consensus 123 l~~~i~~~qe~~a~~a~~~L~~l~~----~~~~V~Rdg~~-------~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~ 191 (903)
T PRK15122 123 LSGLLRFWQEFRSNKAAEALKAMVR----TTATVLRRGHA-------GAEPVRREIPMRELVPGDIVHLSAGDMIPADVR 191 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC----CceEEEECCcc-------CCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEE
Confidence 3344455555666677777643221 11223333320 11267889999999999999998655 556766
Q ss_pred cccCCCc
Q 045750 89 SLTGESW 95 (792)
Q Consensus 89 ~ltGEs~ 95 (792)
.+.|++.
T Consensus 192 li~g~~l 198 (903)
T PRK15122 192 LIESRDL 198 (903)
T ss_pred EEEcCce
Confidence 6766653
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.86 E-value=4.4 Score=40.47 Aligned_cols=120 Identities=23% Similarity=0.230 Sum_probs=72.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
-++-|++.++++++++. ++++++|.-.........+++|+... .++... -.....|+ +
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~------------------~~g~~KP~-~ 157 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISE------------------DVGVAKPD-P 157 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEec------------------ccccCCCC-c
Confidence 36678999999999999 99999999988899999999998431 111100 01112232 2
Q ss_pred HHHHHHHhhcC--CCEEEEEcCC-cccHHHHHhCCe-eEEecCCcH---HHHhhcCEEeccCCchHHHHHH
Q 045750 515 LRVVQSLQSVG--KHVVGFLGDG-INDSLALDAANV-GISVDSGAS---VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 515 ~~iv~~l~~~~--~~~v~~iGDg-~ND~~~l~~A~v-gia~~~~~~---~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.-.-..+++.| .+.+++|||+ .||+..-+++|. +|-+..... ......|+.+ .++..+...+
T Consensus 158 ~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 158 EIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLL 226 (229)
T ss_pred HHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHH
Confidence 22333333332 2689999997 577566678887 444442211 1114455555 3455555444
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=85.55 E-value=0.71 Score=46.14 Aligned_cols=130 Identities=12% Similarity=0.145 Sum_probs=70.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEe----C
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARL----T 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~----~ 510 (792)
-.+|+++.+.++.|++.+|.+.++|+-=......+-++-|.... .++++. ...+++. .+.+=. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~--M~Fd~~g--------~l~gF~~~lIH 158 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNF--MDFDEDG--------VLVGFKGPLIH 158 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE---EEE-TTS--------BEEEE-SS---
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeee--EEECCcc--------eEeecCCCceE
Confidence 46899999999999999999999999999998888888876321 111110 0000000 000000 1
Q ss_pred hhhHHH-------HHHHHhhcCCCEEEEEcCCcccHHHHHhC---CeeEEec--CCc-----HHHHhhcCEEeccCCchH
Q 045750 511 PTQKLR-------VVQSLQSVGKHVVGFLGDGINDSLALDAA---NVGISVD--SGA-----SVAKDLADIILLEKDLNV 573 (792)
Q Consensus 511 p~~K~~-------iv~~l~~~~~~~v~~iGDg~ND~~~l~~A---~vgia~~--~~~-----~~~~~~ad~vl~~~~~~~ 573 (792)
+-.|.+ ..+.++.+ ..|+..||+.-|+.|-.-. +.-+.+| |.. +.-+++=|+|+.+|.--.
T Consensus 159 ~~NKn~~~l~~~~~~~~~~~R--~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 159 TFNKNESALEDSPYFKQLKKR--TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp TT-HHHHHHTTHHHHHCTTT----EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EeeCCcccccCchHHHHhccC--CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 112222 12233333 5799999999999996544 4444455 433 234557799999887555
Q ss_pred HHHHH
Q 045750 574 LVAGV 578 (792)
Q Consensus 574 i~~~i 578 (792)
++..|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=85.48 E-value=4.6 Score=42.04 Aligned_cols=92 Identities=21% Similarity=0.263 Sum_probs=57.2
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEE
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK---ICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~---ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
|++.-.+.+-|++.++|++|+++|++++++|++...+... -.+++|+.... ..++
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~---------------------~~i~- 68 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLA---------------------EQLF- 68 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh---------------------hhEe-
Confidence 4444467788899999999999999999999976543333 34567774210 0022
Q ss_pred EeChhhHHHHHHHHhh---cCCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 508 RLTPTQKLRVVQSLQS---VGKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~---~~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
++. ....+.+++ .+ ..|.++|+. .....++.+++-+.
T Consensus 69 --ts~--~~~~~~l~~~~~~~-~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 69 --SSA--LCAARLLRQPPDAP-KAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred --cHH--HHHHHHHHhhCcCC-CEEEEEcCH-HHHHHHHHCCCEEe
Confidence 111 122233444 23 678889975 34566777776654
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=84.57 E-value=1.8 Score=44.50 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=37.8
Q ss_pred CC-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 439 PK-DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 439 ~r-~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 45 999999999999999999999888889999999999964
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.27 E-value=6.3 Score=38.86 Aligned_cols=86 Identities=15% Similarity=0.097 Sum_probs=56.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSL----AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~----a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
.+-||+.+.++...+.|.++..+|.|..+. +..=.++.|++... ... +...-....
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~-------------------~~~-~llkk~~k~ 181 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL-------------------ESH-LLLKKDKKS 181 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc-------------------ccc-eEEeeCCCc
Confidence 456899999999999999999999999876 34445666775311 111 222222233
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHh
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDA 544 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~ 544 (792)
|..=.+.+++.. ..|+.+||..+|......
T Consensus 182 Ke~R~~~v~k~~-~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 182 KEVRRQAVEKDY-KIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred HHHHHHHHhhcc-ceeeEecCchhhhcchhh
Confidence 443344444444 899999999999766543
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.07 E-value=8.8 Score=39.22 Aligned_cols=128 Identities=22% Similarity=0.182 Sum_probs=78.9
Q ss_pred cccCCCCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCC----CC---ccccchhhhccCHHH---------
Q 045750 433 ITFYDPPKDSAKQALWRLAKK-GVKAKLLTGDSLSLAIKICHEVGIR----TT---HVSTGPDLELLSQES--------- 495 (792)
Q Consensus 433 i~~~d~~r~~~~~~I~~l~~~-Gi~v~~~Tgd~~~~a~~ia~~~gi~----~~---~~~~g~~~~~~~~~~--------- 495 (792)
--....+-++..+.+++|... ..-++++|||..........-.|+. ++ ..++|.......++.
T Consensus 35 ~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~ 114 (266)
T COG1877 35 HPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVA 114 (266)
T ss_pred CccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHH
Confidence 344567888999999999988 4469999999999998887755551 00 122332211111110
Q ss_pred --HHHhh------------------------------------------------hcceEEEEeChhhHHHHHHHHhhc-
Q 045750 496 --FHERV------------------------------------------------KRATVLARLTPTQKLRVVQSLQSV- 524 (792)
Q Consensus 496 --~~~~~------------------------------------------------~~~~v~~~~~p~~K~~iv~~l~~~- 524 (792)
++..+ .+..|-.|-+-..|...++.+.+.
T Consensus 115 ~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~ 194 (266)
T COG1877 115 AILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL 194 (266)
T ss_pred HHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC
Confidence 00000 023345555556799998865554
Q ss_pred CC--CEEEEEcCCcccHHHHHhCC----eeEEecCCcHHHHh
Q 045750 525 GK--HVVGFLGDGINDSLALDAAN----VGISVDSGASVAKD 560 (792)
Q Consensus 525 ~~--~~v~~iGDg~ND~~~l~~A~----vgia~~~~~~~~~~ 560 (792)
+. ..+++.||...|-.||+..+ .+|-++.++..++.
T Consensus 195 ~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t~a~~ 236 (266)
T COG1877 195 PFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGSTQAKF 236 (266)
T ss_pred CCCCCcceecCCCCccHHHHHhhccCCCceEEecCCcccccc
Confidence 21 35889999999999999887 34445544333333
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=82.81 E-value=2 Score=48.48 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=33.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHhCCC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSL------------SLAIKICHEVGIR 478 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~------------~~a~~ia~~~gi~ 478 (792)
+-|++.+++++|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998665 3466777788775
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=81.79 E-value=1.5 Score=41.87 Aligned_cols=84 Identities=13% Similarity=0.069 Sum_probs=54.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++ ++.++|+-+........+++|+.. +.++++++... .+-.|+-=.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~----------------~KP~p~~f~ 146 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA----------------YKPDPVVYE 146 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC----------------CCCCHHHHH
Confidence 57889999998 378999999999998999999853 11222221100 111222224
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhC
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAA 545 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A 545 (792)
...+.+.-.. ..+++|||+..|+.+-+++
T Consensus 147 ~~~~~~~~~p-~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 147 LVFDTVGLPP-DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHCCCH-HHeEeEecChhhHHHHhcC
Confidence 4445554444 6789999999998876543
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 792 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 7e-40 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 4e-39 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-38 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 9e-38 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-37 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-35 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-28 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-28 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-28 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-28 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 3e-21 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 4e-16 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 5e-16 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 6e-15 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 6e-15 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 1e-14 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 1e-10 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-10 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-10 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-10 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 3e-08 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-08 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-08 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 792 | |||
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-118 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-117 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 4e-62 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-42 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 5e-56 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 4e-25 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-24 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-23 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-23 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-06 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-23 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 9e-06 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-22 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 8e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-07 |
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 671 bits (1733), Expect = 0.0
Identities = 175/802 (21%), Positives = 325/802 (40%), Gaps = 74/802 (9%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
+ L+L++ + F QE+ + +L + + V R G + + ++ +VVPG
Sbjct: 147 ICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLR-DGTLKE------IEAPEVVPG 199
Query: 61 DIVIFEPGDLFPGDVRLLTSK-HLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICF 119
DI+ E G + P D R++T L V QS+LTGES +K + F
Sbjct: 200 DILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKG-------------DQVF 246
Query: 120 MGTNVVSGSGTGLVVSTGSKTY---TSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIV 176
+ V G ++ +TG T+ + + + F + + I +L+ +++
Sbjct: 247 ASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGH--FTEVLNGIGTILLILVIFT 304
Query: 177 ATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLG 236
I+ + ++ S + + + F +++ P P +V T++A GA +A+ + +V+ L
Sbjct: 305 LLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLS 364
Query: 237 AIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDD 296
AI + ++ILC DKTGTLT ++ + + G E+++ A L + K +D
Sbjct: 365 AIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAASRKKKGIDAIDK 424
Query: 297 AILAYVYTNGY-RFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKG 355
A L + + SK+K L PFD V +KV ++E+ R KG
Sbjct: 425 AFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQ---------GERITCVKG 475
Query: 356 ALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQ 415
A V+K + E + N E + G R +GVA KR
Sbjct: 476 APLFVLKTVEEDHPI--------PEEVDQAYKNKVAEFATRGFRSLGVARKR-------- 519
Query: 416 SNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEV 475
E LG++ DPP+ + + G+ K+LTGD++ +A + ++
Sbjct: 520 -------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQL 572
Query: 476 GIRT----THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGF 531
G+ T + ++ V+ A A + P K VV+ LQ G ++V
Sbjct: 573 GLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRG-YLVAM 631
Query: 532 LGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKY 591
GDG+ND+ +L A+ GI+V+ + A+ ADI+ L L ++ ++ R F Y
Sbjct: 632 TGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAY 691
Query: 592 IKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQ 651
+ I ++ + L + + L + ++ V +AI +D Y +TP
Sbjct: 692 VVYRIALSI-HLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNA--PYSQTPV 748
Query: 652 IWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQ-MNVVFFRSAWFVEGLLMQTLI 710
W+ L + G V + + ++ E N F++ L + +
Sbjct: 749 KWNLPKLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWL 808
Query: 711 IHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLF 770
I + R PF + SW + + ++ + + ++ + + +
Sbjct: 809 IFITRANG-PFWSSIPSWQLSGAIFLVDILATCFTIWGWFEH---SDTSIVAVVRIWIFS 864
Query: 771 IGYFTVGQLVKRIYILIYKKWL 792
G F + V YIL
Sbjct: 865 FGIFCIMGGVY--YILQDSVGF 884
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 664 bits (1714), Expect = 0.0
Identities = 173/810 (21%), Positives = 338/810 (41%), Gaps = 75/810 (9%)
Query: 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPG 60
++ L++I+ + F +E + AA L + KV R G+ + + +VPG
Sbjct: 99 IICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLR-DGKWSE------QEAAILVPG 151
Query: 61 DIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFM 120
DIV + GD+ P D RLL L V QS+LTGES K F
Sbjct: 152 DIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKHPG-------------QEVFS 198
Query: 121 GTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLIC-VMLIVATI 179
G+ G +V++TG T+ + F+K + I IC + + +
Sbjct: 199 GSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIE 258
Query: 180 IILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIR 239
II++ + + I + + P P +++ ++A G+ +++ + K + AI
Sbjct: 259 IIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 318
Query: 240 DMGTMDILCIDKTGTLTMDRAIMVNHLD---SWGFPKENVLRFAFLNSYYKTDQKYPLDD 296
+M MD+LC DKTGTLT+++ + +L G K+ VL FA + S + + +D
Sbjct: 319 EMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVEN--QDAIDA 376
Query: 297 AILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGA 356
A++ + + + +++ +PF+ V ++ ++ S ++KGA
Sbjct: 377 AMVGML--ADPKEARAGIREVHFLPFNPVDKRTALTYIDGS---------GNWHRVSKGA 425
Query: 357 LEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQS 416
E+++++ +++ K++L++ ++ + GLR + VA + + +
Sbjct: 426 PEQILELAKA------------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKES- 472
Query: 417 NRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG 476
+ F+GL+ +DPP+ + + + R GV K++TGD L++ + +G
Sbjct: 473 ------PGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 526
Query: 477 IRT-----THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGF 531
+ T + + L+ E +++A A + P K +V+ LQ H+VG
Sbjct: 527 MGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERK-HIVGM 585
Query: 532 LGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKY 591
GDG+ND+ AL A++GI+V A+ +DI+L E L+V+++ V R F Y
Sbjct: 586 TGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 645
Query: 592 IKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQ 651
++ + V ++ + + + +L L + I D++ TP
Sbjct: 646 TIYAVSITIRIVFGFMLIALIWEF-DFSAFMVLIIAILNDGTIMTISKDRV--KPSPTPD 702
Query: 652 IWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYN-------QMNVVFFRSAWFVEGL 704
W + + G + V + + + N A +++
Sbjct: 703 SWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVS 762
Query: 705 LMQTLIIHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFG 764
++ +I + R+ F+ E ++ + L+ I I A + + + G
Sbjct: 763 IISQALIFVTRSRSWSFV-ERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAG 821
Query: 765 FLLLLFIGYFTVGQLVKRI--YILIYKKWL 792
+ L I + + K YIL K WL
Sbjct: 822 VIWLYSIVTYFPLDVFKFAIRYILSGKAWL 851
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 380 bits (979), Expect = e-118
Identities = 205/898 (22%), Positives = 356/898 (39%), Gaps = 142/898 (15%)
Query: 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGD 61
+V+++ C +YQE SS+ V V R G ++ VV GD
Sbjct: 142 STVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIR-DGEKST------INAEFVVAGD 194
Query: 62 IVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMG 121
+V + GD P D+R++++ V SSLTGES ++ + + L+ +NI F
Sbjct: 195 LVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSE---NPLETRNIAFFS 251
Query: 122 TNVVSGSGTGLVVSTGSKTYT---STMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVAT 178
TN V G+ G+VV TG +T +T+ S + + P + ++ V + +
Sbjct: 252 TNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTP--IAIEIEHFIHIITGVAVFLGV 309
Query: 179 IIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238
++ + E+++F I + A P+ V L A MAR C+VK+L A+
Sbjct: 310 SFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAV 369
Query: 239 RDMGTMDILCIDKTGTLTMDRAIM-VNHL---------------DSWGFPKEN-----VL 277
+G+ +C DKTGTLT +R M V H+ F K + +
Sbjct: 370 ETLGSTSTICSDKTGTLTQNR--MTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALS 427
Query: 278 RFAFLNS---YYKTDQKYPLDD----------AILAYVYTNGYRFQA--SKWKKLDEIPF 322
R A L + + P+ A+L + Q + K+ EIPF
Sbjct: 428 RIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPF 487
Query: 323 DFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEE 382
+ + I E E +E R ++ KGA E ++ CS + + +G +
Sbjct: 488 NSTNKYQLSIHENEKSSESR------YLLVMKGAPERILDRCSTI--LLNGAEEPLKEDM 539
Query: 383 QKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGP----IESDMVFLGLITFYDP 438
++ N EL G RV+G L K + D +D+ F+GL+ DP
Sbjct: 540 KEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDP 599
Query: 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI--------------------- 477
P+ + A+ + G+K ++TGD A I VGI
Sbjct: 600 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQ 659
Query: 478 -----RTTHVSTGPDLELLSQESFHERVKRAT--VLARLTPTQKLRVVQSLQSVGKHVVG 530
V G DL+ LS E + + T V AR +P QKL +V+ Q G +V
Sbjct: 660 VNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQG-AIVA 718
Query: 531 FLGDGINDSLALDAANVGISV-DSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTM 589
GDG+NDS AL A++G+++ SG+ V+K AD+ILL+ + +V GVE GR+ F N
Sbjct: 719 VTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLK 778
Query: 590 KYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLY-SVGQIAIPWDKMEGD--- 645
K I ++ +N+ + L+ + PL +L + V I++ +++ E D
Sbjct: 779 KSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMK 838
Query: 646 ----YVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFF------ 695
KT ++ +E + M G + L +F+ + M+++
Sbjct: 839 RQPRNPKTDKLVNERLISMAYGQIGMIQALG-GFFSYFVILAENGFLPMDLIGKRVRWDD 897
Query: 696 --------------------------RSAWFVEGLLMQTLIIHLIRTEKIPFIQEVAS-- 727
+++F+ +++Q + + +T + Q+
Sbjct: 898 RWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNK 957
Query: 728 --WPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRI 783
L ++A P + L +++ + F ++ + I
Sbjct: 958 ILIFGLFEETALAAFLSYCPG--TDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFI 1013
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 377 bits (971), Expect = e-117
Identities = 183/782 (23%), Positives = 315/782 (40%), Gaps = 110/782 (14%)
Query: 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGD 61
+A+V+++ C +YQE+ S+ V V R G Q ++ +V GD
Sbjct: 147 IAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIR-DGDKFQ------INADQLVVGD 199
Query: 62 IVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMG 121
+V + GD P D+R+L ++ V SSLTGES ++ + + L+ +NI F
Sbjct: 200 LVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHES---PLETRNIAFFS 256
Query: 122 TNVVSGSGTGLVVSTGSKTYT---STMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVAT 178
T + G+ GLVV+TG +T +++ S + +K P + ++ + ++
Sbjct: 257 TMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTP--IAIEIEHFVDIIAGLAILFGA 314
Query: 179 IIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238
++ +++F +++ A P+ V L+ A +A CVVK+L A+
Sbjct: 315 TFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAV 374
Query: 239 RDMGTMDILCIDKTGTLTMDRAIM-VNHL---------------DSWGFPKEN-----VL 277
+G+ ++C DKTGTLT +R M V+HL F + + +
Sbjct: 375 ETLGSTSVICSDKTGTLTQNR--MTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALC 432
Query: 278 RFAFL--NSYYKTDQKYPLDD-----------AILAYVYTNGYRFQA--SKWKKLDEIPF 322
R L + +K+ Q A+L + ++ K+ EIPF
Sbjct: 433 RVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPF 492
Query: 323 DFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEE 382
+ + I E + R ++ KGA E V++ CS + + G +
Sbjct: 493 NSTNKFQLSIHTLEDPRDPR------HVLVMKGAPERVLERCSSI--LIKGQELPLDEQW 544
Query: 383 QKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGP----IESDMVFLGLITFYDP 438
++ L G RV+G L + D S + F GL++ DP
Sbjct: 545 REAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDP 604
Query: 439 PKDSAKQALWRLAKK-GVKAKLLTGDSLSLAIKICHEVGI-------------------- 477
P+ + A+ + G++ ++TGD A I VGI
Sbjct: 605 PRATVPDAV-LKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVD 663
Query: 478 ------RTTHVSTGPDLELLSQESFHERVKRAT--VLARLTPTQKLRVVQSLQSVGKHVV 529
V G L+ + E ++ V AR +P QKL +V+S Q +G +V
Sbjct: 664 QVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLG-AIV 722
Query: 530 GFLGDGINDSLALDAANVGISV-DSGASVAKDLADIILLEKDLN--VLVAGVERGRVTFG 586
GDG+NDS AL A++G+++ +G+ AK+ AD+ILL D N +V GVE+GR+ F
Sbjct: 723 AVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILL--DDNFASIVTGVEQGRLIFD 780
Query: 587 NTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLY-SVGQIAIPWDKMEGD 645
N K I ++ N+ + LI PL +L +++ ++K E D
Sbjct: 781 NLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESD 840
Query: 646 -------YVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSA 698
K ++ +E G + +F E + + V R
Sbjct: 841 IMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFA-GFTDYFTAMAQEGWFPLLCVGLRPQ 899
Query: 699 WF 700
W
Sbjct: 900 WE 901
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 225 bits (575), Expect = 4e-62
Identities = 88/324 (27%), Positives = 154/324 (47%), Gaps = 18/324 (5%)
Query: 312 SKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMD 371
KK + F R+ +SV S G + KGA E VI C++V
Sbjct: 478 QLMKKEFTLEFSRDRKSMSVYCSPA----KSSRAAVGNKMFVKGAPEGVIDRCNYV--RV 531
Query: 372 SGPITSFTSEEQKRILNLGEELS--NEGLRVIGVAVKRLLPQK---SAQSNRNDGPIESD 426
T +++IL++ +E + LR + +A + P++ + E+D
Sbjct: 532 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 591
Query: 427 MVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI------RTT 480
+ F+G++ DPP+ ++ G++ ++TGD+ AI IC +GI
Sbjct: 592 LTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 651
Query: 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSL 540
TG + + L E +RA AR+ P+ K ++V+ LQS + GDG+ND+
Sbjct: 652 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYD-EITAMTGDGVNDAP 710
Query: 541 ALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANL 600
AL A +GI++ SG +VAK ++++L + + + +VA VE GR + N ++I+ I +N+
Sbjct: 711 ALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNV 770
Query: 601 GGVLSLLIATMFLQTDPLTPKQLL 624
G V+ + + + L P QLL
Sbjct: 771 GEVVCIFLTAALGLPEALIPVQLL 794
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 2e-42
Identities = 81/270 (30%), Positives = 128/270 (47%), Gaps = 20/270 (7%)
Query: 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGD 61
L +++ + + +QE + A L E+ KV R + VQ ++ RD+VPGD
Sbjct: 96 LLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQ-----RIKARDIVPGD 150
Query: 62 IVIFEPGDLFPGDVRLLT--SKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICF 119
IV GD P D+R+L+ S L V QS LTGES + K + D D KN+ F
Sbjct: 151 IVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLF 210
Query: 120 MGTNVVSGSGTGLVVSTGSKTYT---STMFSTIGKQKPP-----DDFEKGVRRISFVLIC 171
GTN+ +G G+V +TG T + + K P D+F + + ++ + IC
Sbjct: 211 SGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISL-IC 269
Query: 172 VMLIVATIIILID----YFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMAR 227
V + + I D + +++A A P+ P ++ T LA G MA+
Sbjct: 270 VAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAK 329
Query: 228 DRCVVKSLGAIRDMGTMDILCIDKTGTLTM 257
+V+SL ++ +G ++C DKTGTLT
Sbjct: 330 KNAIVRSLPSVETLGCTSVICSDKTGTLTT 359
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 188 bits (481), Expect = 5e-56
Identities = 65/180 (36%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 261 IMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEI 320
++ NH D G E VL A+LNS+Y+T K LD A+L R AS+W+K+DEI
Sbjct: 3 VLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEI 62
Query: 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTS 380
PFDF RR++SV++ + ++ KGAL+E++ VCS V +G I
Sbjct: 63 PFDFERRRMSVVVAENT---------EHHQLVCKGALQEILNVCSQVR--HNGEIVPLDD 111
Query: 381 EEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPK 440
++I + + L+ +GLRV+ VA K LP + R D ESD++ G I F D
Sbjct: 112 IMLRKIKRVTDTLNRQGLRVVAVATKY-LPAREGDYQRAD---ESDLILEGYIAFLDHHH 167
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 4e-25
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 26/162 (16%)
Query: 426 DMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTG 485
+ + D P+ + K L +L +G+K +L+GD ++ E+ I
Sbjct: 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI-------- 175
Query: 486 PDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAA 545
+ L+P K+R+++ L+ G V +GDG+ND+ AL A
Sbjct: 176 -----------------QEYYSNLSPEDKVRIIEKLKQNGN-KVLMIGDGVNDAAALALA 217
Query: 546 NVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGN 587
+V +++ +G ++K++ADIIL+ D+ L+ ++ +
Sbjct: 218 DVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNA 259
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 102 bits (258), Expect = 2e-24
Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 47/197 (23%)
Query: 391 EELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRL 450
E+L E + VA +G G+I D K+SAK A+ L
Sbjct: 136 EKLEREAKTAVIVAR--------------NG------RVEGIIAVSDTLKESAKPAVQEL 175
Query: 451 AKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT 510
+ G+K ++TGD+ A I E+ + V+A +
Sbjct: 176 KRMGIKVGMITGDNWRSAEAISRELNL-------------------------DLVIAEVL 210
Query: 511 PTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD 570
P QK V+ LQ+ K VV F+GDGIND+ AL A++GI+V SG+ VA + DI+L+ D
Sbjct: 211 PHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDD 268
Query: 571 LNVLVAGVERGRVTFGN 587
L +VA ++ R T
Sbjct: 269 LRDVVAAIQLSRKTMSK 285
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-23
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 47/197 (23%)
Query: 391 EELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRL 450
E+L +G V+ + +G G+I D + +++A+ +L
Sbjct: 117 EKLKQQGKTVVFILK--------------NG------EVSGVIALADRIRPESREAISKL 156
Query: 451 AKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT 510
G+K +LTGD+ +A + E+G+ A +
Sbjct: 157 KAIGIKCMMLTGDNRFVAKWVAEELGL-------------------------DDYFAEVL 191
Query: 511 PTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD 570
P +K V+ +Q K+V +GDG+ND+ AL A+VGI++ +G VA + ADI+L+ D
Sbjct: 192 PHEKAEKVKEVQQ--KYVTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRND 249
Query: 571 LNVLVAGVERGRVTFGN 587
+ A VE R T+
Sbjct: 250 PRDVAAIVELSRKTYSK 266
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 4e-23
Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 46/197 (23%)
Query: 391 EELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRL 450
+EL +G V+ +AV D + L+ DP K S + + L
Sbjct: 527 DELRGKGASVMFMAV--------------------DGKTVALLVVEDPIKSSTPETILEL 566
Query: 451 AKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT 510
+ G++ +LTGDS A + +GI V+A +
Sbjct: 567 QQSGIEIVMLTGDSKRTAEAVAGTLGI-------------------------KKVVAEIM 601
Query: 511 PTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD 570
P K R+V L+ G +V GDG+ND+ AL A++GI++ +G VA + A + LL D
Sbjct: 602 PEDKSRIVSELKDKGL-IVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGD 660
Query: 571 LNVLVAGVERGRVTFGN 587
L + T N
Sbjct: 661 LRGIAKARRLSESTMSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 4e-06
Identities = 64/271 (23%), Positives = 102/271 (37%), Gaps = 72/271 (26%)
Query: 40 AGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFP--GDVRLLTSKHLVVSQSSLTGESWTA 97
A R+ + +V +V GD++ PG+ P G+V V +S +TGE
Sbjct: 227 AHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV---QEGRSFVDESMVTGEPIPV 283
Query: 98 EKTADIREDHCTPLLDLKNICFMGTNVVSGS--GTGLVVSTGSKTYTSTMFSTIGK---- 151
K A V+ + TG V + TM + I +
Sbjct: 284 AKEA-------------------SAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSD 324
Query: 152 -Q--KPPDDFEKGVRRIS--FVLICVMLI-VATIIILIDYFTSKNLSESILFGISV---A 202
Q + P ++ +S FV V+L+ V + I+ LS ++ +SV A
Sbjct: 325 AQRSRAP--IQRLADTVSGWFVPA-VILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIA 381
Query: 203 C--AL---TPQMFPLIVNTSL----AKGA----LAMARDRCVVKSLGAIRDMGTMDILCI 249
C AL TP S+ KGA L +K+ A+ M ++ L +
Sbjct: 382 CPCALGLATP--------MSIMVGVGKGAQSGVL--------IKNAEALERMEKVNTLVV 425
Query: 250 DKTGTLTMDRAIMVNHLDSWGFPKENVLRFA 280
DKTGTLT + + + F ++N L A
Sbjct: 426 DKTGTLTEGHPK-LTRIVTDDFVEDNALALA 455
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 7e-23
Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 27/159 (16%)
Query: 429 FLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDL 488
G+I D K+SAK A+ L + G+K ++TGD+ A I E+ + V
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL--DLV------ 577
Query: 489 ELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548
A VL P QK V+ LQ+ K VV F+GDGIND+ AL A++G
Sbjct: 578 -------------IAEVL----PHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLG 618
Query: 549 ISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGN 587
I+V SG+ VA + DI+L+ DL +VA ++ R T
Sbjct: 619 IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSK 657
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 9e-06
Identities = 60/269 (22%), Positives = 100/269 (37%), Gaps = 73/269 (27%)
Query: 42 RVVQSELIVQVDQRDVVPGDIVIFEPGDLFP--GDVRLLTSKHLVVSQSSLTGESWTAEK 99
V++ + V +V GDIVI PG+ P G V V +S ++GE K
Sbjct: 214 VVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVV---VEGESYVDESMISGEPVPVLK 270
Query: 100 TADIREDHCTPLLDLKNICFMGTNVVSGS--GTGLVVSTGSKTYTSTMFSTIGK-----Q 152
+ G V + TG++ ++ T+ + I K
Sbjct: 271 SK-------------------GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 311
Query: 153 --KPPDDFEKGVRRIS--FVLICVMLI-VATIIILIDYFTSKNLSESILFGISV---A-- 202
KPP ++ ++ F+ V+L+ ++ I + L + I+V A
Sbjct: 312 GSKPP--IQRLADKVVAYFIPT-VLLVAISAFIYWY-FIAHAPLLFAFTTLIAVLVVACP 367
Query: 203 CAL---TPQMFPLIVNTSL----AKGA----LAMARDRCVVKSLGAIRDMGTMDILCIDK 251
CA TP T+L KGA L +K+ A+ + + DK
Sbjct: 368 CAFGLATP--------TALTVGMGKGAELGIL--------IKNADALEVAEKVTAVIFDK 411
Query: 252 TGTLTMDRAIMVNHLDSWGFPKENVLRFA 280
TGTLT + + + + G +E +LR A
Sbjct: 412 TGTLTKGKPEVTDLVPLNGDERE-LLRLA 439
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-22
Identities = 59/197 (29%), Positives = 88/197 (44%), Gaps = 47/197 (23%)
Query: 391 EELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRL 450
E+L E + VA + G+I D K+SAK A+ L
Sbjct: 430 EKLEREAKTAVIVAR--------------------NGRVEGIIAVSDTLKESAKPAVQEL 469
Query: 451 AKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT 510
+ G+K ++TGD+ A I E+ + V+A +
Sbjct: 470 KRMGIKVGMITGDNWRSAEAISRELNL-------------------------DLVIAEVL 504
Query: 511 PTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD 570
P QK V+ LQ+ K VV F+GDGIND+ AL A++GI+V SG+ VA + DI+L+ D
Sbjct: 505 PHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDD 562
Query: 571 LNVLVAGVERGRVTFGN 587
L +VA ++ R T
Sbjct: 563 LRDVVAAIQLSRKTMSK 579
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 8e-06
Identities = 60/269 (22%), Positives = 100/269 (37%), Gaps = 73/269 (27%)
Query: 42 RVVQSELIVQVDQRDVVPGDIVIFEPGDLFP--GDVRLLTSKHLVVSQSSLTGESWTAEK 99
V++ + V +V GDIVI PG+ P G V V +S ++GE K
Sbjct: 136 VVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVV---VEGESYVDESMISGEPVPVLK 192
Query: 100 TADIREDHCTPLLDLKNICFMGTNVVSGS--GTGLVVSTGSKTYTSTMFSTIGK-----Q 152
+ G V + TG++ ++ T+ + I K
Sbjct: 193 SK-------------------GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 233
Query: 153 --KPPDDFEKGVRRIS--FVLICVMLI-VATIIILIDYFTSKNLSESILFGISV---AC- 203
KPP ++ ++ F+ V+L+ ++ I + L + I+V AC
Sbjct: 234 GSKPP--IQRLADKVVAYFIPT-VLLVAISAFIYWY-FIAHAPLLFAFTTLIAVLVVACP 289
Query: 204 -AL---TPQMFPLIVNTSL----AKGA----LAMARDRCVVKSLGAIRDMGTMDILCIDK 251
A TP T+L KGA L +K+ A+ + + DK
Sbjct: 290 CAFGLATP--------TALTVGMGKGAELGIL--------IKNADALEVAEKVTAVIFDK 333
Query: 252 TGTLTMDRAIMVNHLDSWGFPKENVLRFA 280
TGTLT + + + + G +E +LR A
Sbjct: 334 TGTLTKGKPEVTDLVPLNGDERE-LLRLA 361
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 7e-09
Identities = 72/473 (15%), Positives = 145/473 (30%), Gaps = 121/473 (25%)
Query: 18 GSSK---AAMKLSEF-VRCP-------IKVQRC--AGRVV--QSELIVQVDQRDVVPGDI 62
GS K A + V+C + ++ C V+ +L+ Q+D D
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 63 ---VIFEPGDLFPGDVRLLTSKH-----LVVSQSSLTGESWTAE--KTADIREDHCTPLL 112
+ + RLL SK LV+ A+ ++ C LL
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLL------NVQNAKAWNAFNLS---CKILL 270
Query: 113 DLKNICFMGTNVVSGSGTGLVV----STG-SKTYTSTMFSTIGKQKPPDDFEKGVRRISF 167
+ T+ +S + T + S + ++ +P D + V +
Sbjct: 271 TTRFKQV--TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP-QDLPREVLTTNP 327
Query: 168 VLICVMLIVATI---IILIDYF---TSKNLSESILFGISVACALTPQ----------MFP 211
+ +I +I + D + L+ I S+ L P +FP
Sbjct: 328 RRLS--IIAESIRDGLATWDNWKHVNCDKLTTII--ESSLNV-LEPAEYRKMFDRLSVFP 382
Query: 212 LIVNTSLAKGALAM------------ARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDR 259
+ L++ ++ SL + K T++
Sbjct: 383 PSAHIPTI--LLSLIWFDVIKSDVMVVVNKLHKYSL-VEKQ---------PKESTIS--- 427
Query: 260 AIMVNHLDSWG-FPKENVLRFAFLNSYYKTDQKYPLDDAIL----AYVYTN-GYRF-QAS 312
I +L+ E L + ++ Y + + DD I Y Y++ G+
Sbjct: 428 -IPSIYLELKVKLENEYALHRSIVDHY-NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485
Query: 313 KWKKLDEIP-----FDFVRRKV---SVILETESITEDRSSQFS--GRFVITK--GALEEV 360
+++ F F+ +K+ S + Q + I E +
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY-ICDNDPKYERL 544
Query: 361 IK-VCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQK 412
+ + F+ ++ I S + +L + L E + A K++ Q+
Sbjct: 545 VNAILDFLPKIEENLICS----KYTDLLRIA--LMAEDEAIFEEAHKQV--QR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 3e-08
Identities = 83/636 (13%), Positives = 176/636 (27%), Gaps = 202/636 (31%)
Query: 10 CLRFYQEYGSSKA---AMKLS-EFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIF 65
L QE K ++++ +F+ PIK + + + + + +QRD + D +F
Sbjct: 70 TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTE-QRQPSMMTRMYI--EQRDRLYNDNQVF 126
Query: 66 EPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVV 125
+K+ V + +R+ LL+L+ NV+
Sbjct: 127 --------------AKYNV----------SRLQPYLKLRQ----ALLELRP----AKNVL 154
Query: 126 ----SGSG-TGLVVSTGSKTYTSTMFS------TIGKQKPPDDFEKGVRRISFVLICVML 174
GSG T + + + P+ V+
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET--------------VLE 200
Query: 175 IVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAM-ARDRCVVK 233
++ ++ ID N + + + + + L + +
Sbjct: 201 MLQKLLYQID----PNW-----------TSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN 245
Query: 234 SLGAIRD------MGTMDILCIDKTGTLTMDRAIM------------VNHLDSWGFPKEN 275
L + + ++ C K T + + ++H S +
Sbjct: 246 CLLVLLNVQNAKAWNAFNLSC--KILLTTRFKQVTDFLSAATTTHISLDHH-SMTLTPDE 302
Query: 276 VLR-FA-FLNSYYKT-----DQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRK 328
V +L+ + P +I+A +G + W + D +
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG----LATWDNWKHVNCDKLTTI 358
Query: 329 VSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFT--------- 379
+ L E R F R + F S I +
Sbjct: 359 IESSLNVLEPAEYR-KMFD-RLSV-------------F---PPSAHIPTILLSLIWFDVI 400
Query: 380 SEEQKRILNLGEELSNEGLRVIGVAVKR----------LLPQKSAQSNRNDGPIESDMVF 429
+ ++N +L L V++ + + N+ +
Sbjct: 401 KSDVMVVVN---KLHKYSL------VEKQPKESTISIPSIYLELKVKLENEYALHRS--- 448
Query: 430 LGLITFYDPPK-----DSAKQAL-----WRL------AKKGVKAKLLTGDSLS---LAIK 470
++ Y+ PK D L + + + L L L K
Sbjct: 449 --IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK 506
Query: 471 ICHEVGIRTTHVSTGPDLELLSQESFHER--VKRATVLARLTPTQKLRVVQSLQSVGKHV 528
I H+ T ++G L L Q F++ RL ++ L + +++
Sbjct: 507 IRHD---STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA----ILDFLPKIEENL 559
Query: 529 VGFLGDGINDS-----LALDAANVGISVDSGASVAK 559
+ + +AL A + I ++ V +
Sbjct: 560 I------CSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 9e-07
Identities = 58/432 (13%), Positives = 123/432 (28%), Gaps = 110/432 (25%)
Query: 365 SFVEHMDSGPITS-----FTSEEQKRILNLGEE----------LSNEGLRVIGVAVKRLL 409
+FV++ D + + EE I+ + L ++ ++ V+ +L
Sbjct: 28 AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL 87
Query: 410 PQ-----KSAQSNRNDGPIESDMVFLGLI--TFYDPPKDSAKQALWRLAK-KGVKAKLL- 460
S P +++ + D AK + RL ++ LL
Sbjct: 88 RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV-FAKYNVSRLQPYLKLRQALLE 146
Query: 461 --------------TGDSLSLAIKICHEVGIRTTH------VSTG----PDLELLSQESF 496
+G + +A+ +C ++ ++ P+ L +
Sbjct: 147 LRPAKNVLIDGVLGSGKT-WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 497 HERV-KRATVLARLTPTQKLRV------VQSLQSVGKHVVGFLG-DGINDSLALDAANVG 548
++ T + + KLR+ ++ L + L + ++ A +A N+
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265
Query: 549 -----ISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTM----KYIKMSII-- 597
+ K + D + ++ + +T KY+
Sbjct: 266 CKILLTTRF------KQVTDFLSAATTTHISLDHHSMT-LTPDEVKSLLLKYLDCRPQDL 318
Query: 598 ---ANLGGVLSL-LIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDYVKTPQIW 653
L +IA ++ T W + D + T
Sbjct: 319 PREVLTTNPRRLSIIAES-IRDGLATWDN----------------WKHVNCDKLTTIIES 361
Query: 654 SENGLP---------MFILFNGPVCILCDVTALFFLWFYYEAYNQMNVV--FFRSAWFVE 702
S N L +F I + L +WF + M VV + + +
Sbjct: 362 SLNVLEPAEYRKMFDRLSVFPPSAHIPTIL--LSLIWFDVIKSDVMVVVNKLHKYSLVEK 419
Query: 703 GLLMQTLIIHLI 714
T+ I I
Sbjct: 420 QPKESTISIPSI 431
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 792 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.95 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.96 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.94 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.93 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.92 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.86 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.81 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.46 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.37 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.36 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.36 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.28 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.26 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.25 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.25 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.24 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.23 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.19 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.19 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.19 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.17 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.17 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.17 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.15 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.1 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.03 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.03 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.03 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.01 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.01 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.99 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.96 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.95 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.93 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.92 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.9 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.9 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.89 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.89 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.88 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.85 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.77 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.76 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.76 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.76 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.72 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.72 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.72 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.71 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.7 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.66 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.58 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.56 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.55 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.53 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.53 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.49 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.49 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.48 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.45 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.44 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.43 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.41 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.39 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.36 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.36 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.36 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.34 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.34 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.32 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.31 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.29 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.28 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.28 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.26 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.26 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.26 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.23 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.23 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.23 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.22 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 98.22 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.2 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.2 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.19 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.19 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.17 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.16 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.14 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.09 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.08 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.08 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.08 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.06 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.06 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.04 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.04 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.03 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.99 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.99 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.95 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.92 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.9 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.9 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.9 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.9 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.81 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.72 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.7 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.69 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.69 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.61 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.56 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 97.55 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.52 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.48 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.43 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.43 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.42 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.42 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.38 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.35 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.29 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.29 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.28 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.25 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 97.24 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.13 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 97.06 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.95 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.81 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.75 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.67 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.58 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.56 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.53 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.35 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 96.17 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.73 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 95.36 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 95.1 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 94.59 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 94.3 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.05 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 93.37 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 92.04 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 91.55 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 89.18 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 88.08 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 87.57 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 87.12 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 82.95 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-118 Score=1081.65 Aligned_cols=772 Identities=23% Similarity=0.345 Sum_probs=666.1
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|+++++++++++++||+|+++++++++++.+++++|+| ||++++|++++|||||+|.|++||+|||||+|+++
T Consensus 146 i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViR-------dG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~ 218 (1034)
T 3ixz_A 146 LIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIR-------DGDKFQINADQLVVGDLVEMKGGDRVPADIRILQA 218 (1034)
T ss_pred hheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE-------CCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEe
Confidence 45788999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC-CCCCChHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDFE 159 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~-~~~~~~~~ 159 (792)
+++.||||+|||||.|+.|.+++.. ...++.+|++|+||.+.+|++.++|++||.+|.+|++.+.++. +.++++++
T Consensus 219 ~~l~VdES~LTGES~pv~K~~~~~~---~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~ 295 (1034)
T 3ixz_A 219 QGRKVDNSSLTGESEPQTRSPECTH---ESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIA 295 (1034)
T ss_pred CCceEEecccCCCCCCeeccCCCcc---ccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCCcHH
Confidence 9889999999999999999987542 3345889999999999999999999999999999999988875 34567899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIR 239 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e 239 (792)
+.++++..++..+++++++++++++...+.+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|+++++|
T Consensus 296 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE 375 (1034)
T 3ixz_A 296 IEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVE 375 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHHHH
Confidence 99999999888888888887777777777889999999999999999999999999999999999999999999999999
Q ss_pred cccceeEEEeccccccccCceEEEEeeCCCCC----------------Cc---HHHHHHHHhhccc--c-----------
Q 045750 240 DMGTMDILCIDKTGTLTMDRAIMVNHLDSWGF----------------PK---ENVLRFAFLNSYY--K----------- 287 (792)
Q Consensus 240 ~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~----------------~~---~~~l~~a~~~~~~--~----------- 287 (792)
+||++++||||||||||+|+|++.+++..+.. .. ..++..+.+++.. .
T Consensus 376 ~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~ 455 (1034)
T 3ixz_A 376 TLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKR 455 (1034)
T ss_pred hhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCc
Confidence 99999999999999999999999998643210 00 1344444332221 1
Q ss_pred CCCCCchHHHHHHHHHhcCccc--ccccceEeEEeCCCCCCCeEEEEEeeCC-CCccccCCCCceEEEEeCChHHHHHhc
Q 045750 288 TDQKYPLDDAILAYVYTNGYRF--QASKWKKLDEIPFDFVRRKVSVILETES-ITEDRSSQFSGRFVITKGALEEVIKVC 364 (792)
Q Consensus 288 ~~~~~p~~~al~~~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~-~~~~~~~~~~~~~~~~kG~~~~il~~~ 364 (792)
...++|.|.|+++++...+... .+..++.++++||+++||+|+++++.+. .++ ++.+++||+||.++++|
T Consensus 456 ~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~-------~~~l~~KGApe~il~~c 528 (1034)
T 3ixz_A 456 IVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDP-------RHVLVMKGAPERVLERC 528 (1034)
T ss_pred eeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCc-------cEEEEEeCChHHHHHHh
Confidence 1246899999999997755433 3567889999999999999988776532 123 68899999999999999
Q ss_pred ccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccC----CCCCCCCCCCcEEEEecccCCCCC
Q 045750 365 SFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQS----NRNDGPIESDMVFLGLITFYDPPK 440 (792)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~i~~~d~~r 440 (792)
+.. ..+|...+++++.++.+.+..++++.+|+||+++|++.+++++.... ....+..|+|++|+|+++++||+|
T Consensus 529 ~~~--~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r 606 (1034)
T 3ixz_A 529 SSI--LIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPR 606 (1034)
T ss_pred HHh--hcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCc
Confidence 987 46788889999999999999999999999999999999875432221 112234689999999999999999
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--------------------------ccccchhhhccCHH
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--------------------------HVSTGPDLELLSQE 494 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--------------------------~~~~g~~~~~~~~~ 494 (792)
|+++++|++|+++||+++|+|||++.+|.++|+++|+... .+++|.++..++++
T Consensus 607 ~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 686 (1034)
T 3ixz_A 607 ATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPS 686 (1034)
T ss_pred hhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHH
Confidence 9999999999999999999999999999999999999432 36788888888888
Q ss_pred HHHHhhhcc--eEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCc
Q 045750 495 SFHERVKRA--TVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDL 571 (792)
Q Consensus 495 ~~~~~~~~~--~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~ 571 (792)
++.+..... .+|+|++|+||.++++.+|+.| +.|+|+|||.||++||++||+||||| +|++.+|++||+|+.++++
T Consensus 687 ~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g-~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~ 765 (1034)
T 3ixz_A 687 ELVEALRTHPEMVFARTSPQQKLVIVESCQRLG-AIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNF 765 (1034)
T ss_pred HHHHHHHhCCceEEEecCHHHHHHHHHHHHHcC-CEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCc
Confidence 888877654 5999999999999999999998 99999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCC
Q 045750 572 NVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTP 650 (792)
Q Consensus 572 ~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p 650 (792)
++|.+++++||++|.|+++++.|.+++|+..++..+++.++..+.|++|+|++|+|+++| +|++++++|++++++|++|
T Consensus 766 ~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~ 845 (1034)
T 3ixz_A 766 ASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLR 845 (1034)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCC
Confidence 999999999999999999999999999999999888888888889999999999999999 7899999999999999988
Q ss_pred CCCC--CCCcc-----hhhhhhhhHHHHHHHHHHHHHHHHhhhc------------cc--c-----------------hH
Q 045750 651 QIWS--ENGLP-----MFILFNGPVCILCDVTALFFLWFYYEAY------------NQ--M-----------------NV 692 (792)
Q Consensus 651 ~~~~--~~~l~-----~~~~~~g~~~a~~~~~~~~~~~~~~~~~------------~~--~-----------------~~ 692 (792)
||.. .+.+. +.+++.|+++++.++.+|++.+...+.. .. . ..
T Consensus 846 Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1034)
T 3ixz_A 846 PRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQ 925 (1034)
T ss_pred CCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhh
Confidence 8754 22222 2234446666655555554433211100 00 0 01
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--cchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHH
Q 045750 693 VFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE--VASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLL 769 (792)
Q Consensus 693 ~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~~--~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~ 769 (792)
..++|++|.+++++|+++.+++|+++.++|+. +.|+++++++++.+++++++.|+| ++.+|++.|+++.+|++++++
T Consensus 926 ~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~ 1005 (1034)
T 3ixz_A 926 YTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPF 1005 (1034)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHH
Confidence 23789999999999999999999988887763 789999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCC
Q 045750 770 FIGYFTVGQLVKRIYILIYKKWL 792 (792)
Q Consensus 770 ~~~~l~~~e~iK~~~~~~~~~~~ 792 (792)
++..++++|+.|++.||+.+.|+
T Consensus 1006 ~~~~~~~~e~~K~~~r~~~~~~~ 1028 (1034)
T 3ixz_A 1006 GLLIFVYDEIRKLGVRCCPGSWW 1028 (1034)
T ss_pred HHHHHHHHHHHHHHHHhCCCChh
Confidence 99999999999999998877774
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-117 Score=1072.56 Aligned_cols=770 Identities=24% Similarity=0.347 Sum_probs=662.5
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
++++++++++++||+|+++++++++++.+++++|+| ||++++|++++|+|||+|.|++||+|||||+|++|++
T Consensus 143 ~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~R-------dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~ 215 (1028)
T 2zxe_A 143 TVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIR-------DGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG 215 (1028)
T ss_dssp HHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEE-------TTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEE-------CCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc
Confidence 466788999999999999999999999999999999 9999999999999999999999999999999999988
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC-CCCCChHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDFEKG 161 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~-~~~~~~~~~~ 161 (792)
+.||||+|||||.|+.|.+++..+ ..++.+|++|+||.+.+|.+.++|++||.+|.+|++.+.+.. +.+++++++.
T Consensus 216 ~~VdeS~LTGES~pv~K~~~~~~~---~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~ 292 (1028)
T 2zxe_A 216 CKVDNSSLTGESEPQTRSPEFSSE---NPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIE 292 (1028)
T ss_dssp EEEECHHHHSCCSCEECCSSCCCS---STTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHHHH
T ss_pred EEEEcCccCCCCcceecccCCCCC---CcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCcHHHH
Confidence 899999999999999999886532 356899999999999999999999999999999999988865 4567899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcc
Q 045750 162 VRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241 (792)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~l 241 (792)
++++..+++.++++++++.++++++.+.+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|+++++|+|
T Consensus 293 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~L 372 (1028)
T 2zxe_A 293 IEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETL 372 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchHhhhh
Confidence 99999999888888888777776666678999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEeccccccccCceEEEEeeCCCC------C----------Cc---HHHHHHHHhhcc--cc-----------CC
Q 045750 242 GTMDILCIDKTGTLTMDRAIMVNHLDSWG------F----------PK---ENVLRFAFLNSY--YK-----------TD 289 (792)
Q Consensus 242 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~------~----------~~---~~~l~~a~~~~~--~~-----------~~ 289 (792)
|++|+||||||||||+|+|++.+++..+. . .. +.++..+++++. .+ ..
T Consensus 373 g~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~ 452 (1028)
T 2zxe_A 373 GSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSV 452 (1028)
T ss_dssp HHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCE
T ss_pred cCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCcccccee
Confidence 99999999999999999999999854321 0 01 245555544321 11 12
Q ss_pred CCCchHHHHHHHHHhcCcc--cccccceEeEEeCCCCCCCeEEEEEeeCC-CCccccCCCCceEEEEeCChHHHHHhccc
Q 045750 290 QKYPLDDAILAYVYTNGYR--FQASKWKKLDEIPFDFVRRKVSVILETES-ITEDRSSQFSGRFVITKGALEEVIKVCSF 366 (792)
Q Consensus 290 ~~~p~~~al~~~~~~~~~~--~~~~~~~~~~~~~f~~~~k~~~v~~~~~~-~~~~~~~~~~~~~~~~kG~~~~il~~~~~ 366 (792)
.++|+|.|+++++...+.. ..+..++.++++||+|+||+|+++++... .++ ++++++||+||.++++|+.
T Consensus 453 ~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~-------~~~~~~KGA~e~il~~c~~ 525 (1028)
T 2zxe_A 453 AGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSES-------RYLLVMKGAPERILDRCST 525 (1028)
T ss_dssp ESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTC-------CEEEEEEECHHHHHTTEEE
T ss_pred CCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCC-------cEEEEEeCCcHHHHHHhhh
Confidence 4689999999999765322 23456889999999999999999998632 122 6789999999999999998
Q ss_pred ccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccC----CCCCCCCCCCcEEEEecccCCCCChh
Q 045750 367 VEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQS----NRNDGPIESDMVFLGLITFYDPPKDS 442 (792)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~i~~~d~~r~~ 442 (792)
. ..+|...+++++.++.+.+..++++++|+||+++|++++++++.... ....+..|+|++|+|+++++||+||+
T Consensus 526 ~--~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~ 603 (1028)
T 2zxe_A 526 I--LLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAA 603 (1028)
T ss_dssp E--CBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTT
T ss_pred h--hcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChh
Confidence 7 46788889999999999999999999999999999999865432211 11123457899999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--------------------------CccccchhhhccCHHHH
Q 045750 443 AKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--------------------------THVSTGPDLELLSQESF 496 (792)
Q Consensus 443 ~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--------------------------~~~~~g~~~~~~~~~~~ 496 (792)
++++|++|+++||+++|+|||++.+|.++|+++||.. ..+++|.++..+.++++
T Consensus 604 ~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l 683 (1028)
T 2zxe_A 604 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVL 683 (1028)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHH
Confidence 9999999999999999999999999999999999963 24678888888888888
Q ss_pred HHhhhcc--eEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchH
Q 045750 497 HERVKRA--TVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNV 573 (792)
Q Consensus 497 ~~~~~~~--~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~ 573 (792)
++...+. .+|+|++|+||.++++.+|+.| +.|+|+|||.||+|||++||+||||| +|++.+|++||+|+.++++++
T Consensus 684 ~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g-~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~ 762 (1028)
T 2zxe_A 684 DDILHYHTEIVFARTSPQQKLIIVEGCQRQG-AIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFAS 762 (1028)
T ss_dssp HHHHHHCSEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHH
T ss_pred HHHHhhCCcEEEEEcCHHHHHHHHHHHHhCC-CEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHH
Confidence 8887766 4999999999999999999998 89999999999999999999999999 799999999999999999999
Q ss_pred HHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCC
Q 045750 574 LVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQI 652 (792)
Q Consensus 574 i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~ 652 (792)
|.+++++||++|.|+++++.|.++.|+..++..+++.++..+.|++++|++|+|+++| +|++++++|++++++|++||+
T Consensus 763 I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr 842 (1028)
T 2zxe_A 763 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPR 842 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCC
Confidence 9999999999999999999999999999988888888888889999999999999999 688999999999999999877
Q ss_pred CC-C-CCcc-----hhhhhhhhHHHHHHHHHHHHHHHHhhh------------c----c------cc---------hHHH
Q 045750 653 WS-E-NGLP-----MFILFNGPVCILCDVTALFFLWFYYEA------------Y----N------QM---------NVVF 694 (792)
Q Consensus 653 ~~-~-~~l~-----~~~~~~g~~~a~~~~~~~~~~~~~~~~------------~----~------~~---------~~~~ 694 (792)
+. . +.+. +.+++.|++++++.+++|++.++..+. . . +. ....
T Consensus 843 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1028)
T 2zxe_A 843 NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFT 922 (1028)
T ss_dssp CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHH
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhH
Confidence 53 3 2222 223455677676666655443322111 0 0 00 1236
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccc-ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHHH
Q 045750 695 FRSAWFVEGLLMQTLIIHLIRTEKIPFIQ-EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFIG 772 (792)
Q Consensus 695 ~~t~~f~~lv~~q~~~~~~~r~~~~~~~~-~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~~ 772 (792)
++|++|.+++++|+++.+++|+++.++|+ .+.|+++++++++.++++++++|+| ++.+|++.|+++.+|++++++++.
T Consensus 923 ~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~ 1002 (1028)
T 2zxe_A 923 CHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLI 1002 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 89999999999999999999998877665 4789999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 045750 773 YFTVGQLVKRIYILIYKKWL 792 (792)
Q Consensus 773 ~l~~~e~iK~~~~~~~~~~~ 792 (792)
.+++.|+.|++.|++.++|+
T Consensus 1003 ~~~~~e~~k~~~r~~~~~~~ 1022 (1028)
T 2zxe_A 1003 IFLYDEMRRFIIRRSPGGWV 1022 (1028)
T ss_dssp HHHHHHHHHHHHHHCTTSHH
T ss_pred HHHHHHHHHHHHHccCcchh
Confidence 99999999988887767774
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-112 Score=1031.93 Aligned_cols=770 Identities=24% Similarity=0.356 Sum_probs=642.2
Q ss_pred EEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCe--EEEEecCCCCCCcEEEECCCCeecccEEEEE--
Q 045750 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSEL--IVQVDQRDVVPGDIVIFEPGDLFPGDVRLLT-- 79 (792)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~--~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~-- 79 (792)
+++++.++++|||+|+++++++++++.+++++|+| ||+ +++|+++||+|||+|.|++||+|||||+|++
T Consensus 98 ~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R-------~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~ 170 (995)
T 3ar4_A 98 ILIANAIVGVWQERNAENAIEALKEYEPEMGKVYR-------ADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK 170 (995)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEB-------TTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEe-------CCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEe
Confidence 44567789999999999999999999999999999 776 6999999999999999999999999999965
Q ss_pred eCCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC-CCCCChH
Q 045750 80 SKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDF 158 (792)
Q Consensus 80 ~~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~-~~~~~~~ 158 (792)
++++.||||+|||||.|+.|.+++..+...+..+.+|++|+||.+.+|.++++|++||.+|.+|++.+.++. +.+++++
T Consensus 171 s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tpl 250 (995)
T 3ar4_A 171 STTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPL 250 (995)
T ss_dssp SSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHH
T ss_pred eceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcCCCCCCcH
Confidence 456899999999999999999986555556678899999999999999999999999999999999998875 4567899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcc------cccchh----HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhc
Q 045750 159 EKGVRRISFVLICVMLIVATIIILIDYF------TSKNLS----ESILFGISVACALTPQMFPLIVNTSLAKGALAMARD 228 (792)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~ 228 (792)
++.++++..+++.+++++++++++++.. .+.+|. ..+..++++++++|||+||++++++++.++.+|+|+
T Consensus 251 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~ma~~ 330 (995)
T 3ar4_A 251 QQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKK 330 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhccC
Confidence 9999999988888877777776665431 112243 346678899999999999999999999999999999
Q ss_pred CCccccchhhhcccceeEEEeccccccccCceEEEEeeCCC---------------C--CCc----------------HH
Q 045750 229 RCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSW---------------G--FPK----------------EN 275 (792)
Q Consensus 229 ~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~---------------~--~~~----------------~~ 275 (792)
|+++|+++++|+||++|+||||||||||+|+|++.+++..+ + .++ +.
T Consensus 331 ~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 410 (995)
T 3ar4_A 331 NAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDG 410 (995)
T ss_dssp TEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHH
T ss_pred CcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccccccccHH
Confidence 99999999999999999999999999999999999875421 0 000 11
Q ss_pred HHH---HHHhhcc--ccC--------CCCCchHHHHHHHHHhcCc-cc-----------------ccccceEeEEeCCCC
Q 045750 276 VLR---FAFLNSY--YKT--------DQKYPLDDAILAYVYTNGY-RF-----------------QASKWKKLDEIPFDF 324 (792)
Q Consensus 276 ~l~---~a~~~~~--~~~--------~~~~p~~~al~~~~~~~~~-~~-----------------~~~~~~~~~~~~f~~ 324 (792)
+.. .+.+++. .+. ..+||+|.|++.++++.|. .. ....|+.++++||+|
T Consensus 411 ~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s 490 (995)
T 3ar4_A 411 LVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSR 490 (995)
T ss_dssp HHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEET
T ss_pred HHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceEEEeecCC
Confidence 222 2222221 111 1379999999999987665 11 124688999999999
Q ss_pred CCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHH--hhccCeeEE
Q 045750 325 VRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEEL--SNEGLRVIG 402 (792)
Q Consensus 325 ~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~rvl~ 402 (792)
+||||+++++.+..+. ...+..+++||+||.++++|+.. ..++...+++++.++.+.+..+++ +++|+||++
T Consensus 491 ~rk~msvi~~~~~g~~----~~~~~~~~~KGa~e~il~~c~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa 564 (995)
T 3ar4_A 491 DRKSMSVYCSPAKSSR----AAVGNKMFVKGAPEGVIDRCNYV--RVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLA 564 (995)
T ss_dssp TTTEEEEEEEESSCCS----CSCCCEEEEEECHHHHHHTEEEE--EETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred CCCeeEEEEecCCCCc----cccceEEEEcCCHHHHHHhcchh--hcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEE
Confidence 9999999998642100 01146899999999999999877 345566789999999999999999 999999999
Q ss_pred EEEEecCCCccccCC---CCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 403 VAVKRLLPQKSAQSN---RNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 403 ~a~~~~~~~~~~~~~---~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
+|||+++..+..... ...+.+|+|++|+|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++|+..
T Consensus 565 ~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~ 644 (995)
T 3ar4_A 565 LATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG 644 (995)
T ss_dssp EEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred EEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCC
Confidence 999987543211100 11234588999999999999999999999999999999999999999999999999999964
Q ss_pred ------CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 480 ------THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 480 ------~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
+.+++|.++..++++++.+.+.+..+|+|++|+||.++++.+|++| +.|+|+|||.||+|||++||+|||||+
T Consensus 645 ~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g-~~v~~~GDG~ND~~alk~Advgiamg~ 723 (995)
T 3ar4_A 645 ENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYD-EITAMTGDGVNDAPALKKAEIGIAMGS 723 (995)
T ss_dssp TTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTT-CCEEEEECSGGGHHHHHHSTEEEEETT
T ss_pred CCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCC-CEEEEEcCCchhHHHHHHCCeEEEeCC
Confidence 3588999999999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-h
Q 045750 554 GASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-V 632 (792)
Q Consensus 554 ~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 632 (792)
|++.++++||+++.++++.++.+++++||++|.|+++++.|.+++|+..++..+++.++..+.|++|.|++|+|+++| +
T Consensus 724 g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~ 803 (995)
T 3ar4_A 724 GTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGL 803 (995)
T ss_dssp SCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHH
T ss_pred CCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999888888887887788999999999999999 7
Q ss_pred hhhhcccCCCCccccCCCCCCCCCCcc-h----hhhhhhhHHHHHHHHHHHHHHHHhhhcc-------------------
Q 045750 633 GQIAIPWDKMEGDYVKTPQIWSENGLP-M----FILFNGPVCILCDVTALFFLWFYYEAYN------------------- 688 (792)
Q Consensus 633 ~~~~~~~~~~~~~~m~~p~~~~~~~l~-~----~~~~~g~~~a~~~~~~~~~~~~~~~~~~------------------- 688 (792)
|+++++++++++++|++||+++...++ + .+++.|++.++..+.++ +|++.....
T Consensus 804 p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (995)
T 3ar4_A 804 PATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAA--AWWFMYAEDGPGVTYHQLTHFMQCTEDH 881 (995)
T ss_dssp HHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHH--HHHTSSCSSSCCCTTCCGGGCSSCSSCC
T ss_pred HHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcccccccccchhcccccccccc
Confidence 899999999999999998876543333 2 23333444333322222 222211000
Q ss_pred --------cc-hHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--ccchHHHHHHHHHHHHHHHHhhhcc-cccccccc
Q 045750 689 --------QM-NVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQ--EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFT 756 (792)
Q Consensus 689 --------~~-~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~--~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~ 756 (792)
+. ....++|++|.+++++|+++.+++|+++.+++. .|.|+++++++++.++++++++|+| ++.+|++.
T Consensus 882 ~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~ 961 (995)
T 3ar4_A 882 PHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLK 961 (995)
T ss_dssp SCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCC
T ss_pred ccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 00 023579999999999999999999987766543 4778989889888889999999999 99999999
Q ss_pred ccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 045750 757 ELPLTYFGFLLLLFIGYFTVGQLVKRIYILIYK 789 (792)
Q Consensus 757 ~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~~~ 789 (792)
|+++.+|++++++++++++++|+.|++.|++++
T Consensus 962 ~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~~ 994 (995)
T 3ar4_A 962 ALDLTQWLMVLKISLPVIGLDEILKFIARNYLE 994 (995)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999988776654
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-113 Score=1011.85 Aligned_cols=722 Identities=24% Similarity=0.359 Sum_probs=621.4
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
++++++.+++++||+++++++++++++.+++++|+| ||++++|++++|+|||+|.|++||+|||||+|++|++
T Consensus 149 ~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~R-------dG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~ 221 (920)
T 1mhs_A 149 GLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLR-------DGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA 221 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEEC-------SSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEE-------CCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCc
Confidence 345778899999999999999999999999999999 9999999999999999999999999999999999996
Q ss_pred -eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHH
Q 045750 83 -LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEK 160 (792)
Q Consensus 83 -~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~ 160 (792)
+.||||+|||||.|+.|.++ |.+|+||.+.+|.+.++|++||.+|++|++.+.++..+ +++++++
T Consensus 222 ~l~VDES~LTGES~PV~K~~g-------------d~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~ 288 (920)
T 1mhs_A 222 FLQVDQSALTGESLAVDKHKG-------------DQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTE 288 (920)
T ss_dssp CCEEBCTTTSSCCCCEECCSS-------------CEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHH
T ss_pred eeeeeccccCCCCcceEecCC-------------CeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHH
Confidence 89999999999999999987 56999999999999999999999999999988877543 5788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.++++..++++++++++++.++.+++.+.+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|++.++|+
T Consensus 289 ~~~~i~~~l~~~~~~~~~i~~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~ 368 (920)
T 1mhs_A 289 VLNGIGTILLILVIFTLLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIES 368 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhh
Confidence 99999988888777777766666655566788999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCccc-ccccceEeEE
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRF-QASKWKKLDE 319 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~-~~~~~~~~~~ 319 (792)
||++|+||||||||||+|+|++.+++...+.++++++..+++++......+||+|.|+++++.+.+... ....++..+.
T Consensus 369 Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~ 448 (920)
T 1mhs_A 369 LAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQF 448 (920)
T ss_dssp HHTCCEEEEETBTTTBSSCSCCCCCBCCSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEE
T ss_pred hccCcEEEECCCCCccccceeEEEEeecCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEE
Confidence 999999999999999999999999987777776777766655443322234999999999987655422 2456889999
Q ss_pred eCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCe
Q 045750 320 IPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLR 399 (792)
Q Consensus 320 ~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r 399 (792)
+||++.+|+|+++++.+ ++ +.+.++||+||.++++|+.. .+++++.++.+.+..++++.+|+|
T Consensus 449 ~pF~s~~k~ms~iv~~~--~g-------~~~~~~KGape~il~~c~~~--------~~~~~~~~~~~~~~~~~~a~~G~R 511 (920)
T 1mhs_A 449 HPFDPVSKKVVAVVESP--QG-------ERITCVKGAPLFVLKTVEED--------HPIPEEVDQAYKNKVAEFATRGFR 511 (920)
T ss_dssp EEEETTTTEEEEEECCS--SS-------SCEEEEEECHHHHHHHCCCS--------SCCCHHHHHHHHHHHHHHHTSSCC
T ss_pred eeccCCCCeEEEEEEeC--CC-------cEEEEEeCCHHHHHHhcccc--------CCCCHHHHHHHHHHHHHHHhCCCE
Confidence 99999999999998753 23 56789999999999999742 246778888899999999999999
Q ss_pred eEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 400 VIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 400 vl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
++++|++. .|.+++|+|+++++||+||+++++|++||++||+++|+|||++.+|.++|+++||..
T Consensus 512 vL~vA~~~---------------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~ 576 (920)
T 1mhs_A 512 SLGVARKR---------------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGT 576 (920)
T ss_dssp CCEECCCS---------------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred EEEEEEec---------------cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCc
Confidence 99999873 146789999999999999999999999999999999999999999999999999963
Q ss_pred ------CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 480 ------THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 480 ------~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
..+++|. ..++++++.+.+.+..+|+|++|+||.++|+.+|++| +.|+|+|||.||+|||++||+||||++
T Consensus 577 ~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g-~~Vam~GDGvNDapaLk~AdvGIAmg~ 653 (920)
T 1mhs_A 577 NIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRG-YLVAMTGDGVNDAPSLKKADTGIAVEG 653 (920)
T ss_dssp SCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTT-CCCEECCCCGGGHHHHHHSSEEEEETT
T ss_pred cccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCC-CeEEEEcCCcccHHHHHhCCcCccccc
Confidence 2345555 4566777888888889999999999999999999998 999999999999999999999999999
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhhh
Q 045750 554 GASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVG 633 (792)
Q Consensus 554 ~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 633 (792)
|++.+|++||+|+.++++++|.+++++||++|.|+++++.|.++.|+....+..+...+.+ .++++.|++|+++++|+|
T Consensus 654 gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~-~~l~~~~il~~~l~~d~~ 732 (920)
T 1mhs_A 654 SSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILN-RSLNIELVVFIAIFADVA 732 (920)
T ss_dssp SCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS-CCCCHHHHHHHHHHHTTH
T ss_pred ccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999876433333223333 358999999999999999
Q ss_pred hhhcccCCCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhhhccc--chHHHHHHHHHHHHHHHHHHHH
Q 045750 634 QIAIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQ--MNVVFFRSAWFVEGLLMQTLII 711 (792)
Q Consensus 634 ~~~~~~~~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~t~~f~~lv~~q~~~~ 711 (792)
++++++++++++ ++|.+|+.+.++....+.|++.++..+.+|++.+.. +...+ .+...++|++|.+++++|+++.
T Consensus 733 ~lal~~e~~~~~--~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~T~~f~~lv~~~~~~~ 809 (920)
T 1mhs_A 733 TLAIAYDNAPYS--QTPVKWNLPKLWGMSVLLGVVLAVGTWITVTTMYAQ-GENGGIVQNFGNMDEVLFLQISLTENWLI 809 (920)
T ss_dssp HHHCCCCCSGGG--GSCCCCCSSSCSSCHHHHHHHHHHHHHHHHHHHTTT-TTTCCSSSSSSSHHHHHHHHHHHHHHHHT
T ss_pred hhhhcccCcccc--cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccchhhHHHHHHHHHHHHHHHHHH
Confidence 999999998776 566677777777777777777766555554433221 11111 1223589999999999999999
Q ss_pred HHHhcCCcccccccchHHHHHHHHHHHHHHHHhhhccccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 712 HLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 712 ~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~pl~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
+++|+.+. |++.++|+.+++++++..+++++++|.| +|++.|++|.+|+.+++++++.+++.|+.|++.+|+
T Consensus 810 ~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 810 FITRANGP-FWSSIPSWQLSGAIFLVDILATCFTIWG---WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp TSSSCSSS-CSCCSCTHHHHHHHHHHHHHHHHHHSSS---STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred HHhccchh-hhcCchHHHHHHHHHHHHHHHHHHHHhh---hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99998765 6677788988888888888888887765 888999999999999999999999999999876654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-110 Score=987.17 Aligned_cols=726 Identities=23% Similarity=0.358 Sum_probs=588.9
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
++++++.+++++||+|+++++++++++.+++++|+| ||++++|++++|+|||+|.+++||+|||||+|++|++
T Consensus 101 ~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~R-------dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~ 173 (885)
T 3b8c_A 101 CLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLR-------DGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP 173 (885)
T ss_dssp HHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCC-------SSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEE-------CCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc
Confidence 356778888999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCCCChHHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGV 162 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~ 162 (792)
+.||||+|||||.|+.|.++ |.+|+||.+.+|.+.++|++||.+|++|++.+.++...+++++++.+
T Consensus 174 l~VdES~LTGES~Pv~K~~g-------------~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~ 240 (885)
T 3b8c_A 174 LKVDQSALTGESLPVTKHPG-------------QEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 240 (885)
T ss_dssp BCCCCCSTTCCSSCCCBSSC-------------CCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTT
T ss_pred ccccccccCCCCcceEecCC-------------CccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHH
Confidence 89999999999999999987 56999999999999999999999999999988777666678899999
Q ss_pred HHHHHHHHH-HHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcc
Q 045750 163 RRISFVLIC-VMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241 (792)
Q Consensus 163 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~l 241 (792)
+++..+++. +.+.++++.++.++..+.+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|+++++|+|
T Consensus 241 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~L 320 (885)
T 3b8c_A 241 TAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEM 320 (885)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHH
Confidence 999866443 3333444444444444567889999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEeccccccccCceEEEEee---CCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeE
Q 045750 242 GTMDILCIDKTGTLTMDRAIMVNHL---DSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLD 318 (792)
Q Consensus 242 g~v~~i~~DKTGTLT~~~~~v~~~~---~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~ 318 (792)
|++|+||||||||||+|+|++.+.+ ...+.+.++++.++++++. ..++||+|.|+++++.+ ....+..++.++
T Consensus 321 g~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~--~~~~~p~~~Al~~~~~~--~~~~~~~~~~~~ 396 (885)
T 3b8c_A 321 AGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASR--VENQDAIDAAMVGMLAD--PKEARAGIREVH 396 (885)
T ss_dssp TTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCC--SSSCCSHHHHHHHTTCC--TTCCCCSSCCBC
T ss_pred hCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhC--CCCCCchHHHHHHHhhc--hhhHhhcCceee
Confidence 9999999999999999999998532 2234566777877765443 23689999999998742 111234677889
Q ss_pred EeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccC
Q 045750 319 EIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGL 398 (792)
Q Consensus 319 ~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 398 (792)
++||++.+|+|+++++.. ++ +.+.++||+||.++++|+.. ++.++.+.+..++++++|+
T Consensus 397 ~~pF~s~~k~~sv~~~~~--~g-------~~~~~~KGa~e~il~~c~~~------------~~~~~~~~~~~~~~a~~G~ 455 (885)
T 3b8c_A 397 FLPFNPVDKRTALTYIDG--SG-------NWHRVSKGAPEQILELAKAS------------NDLSKKVLSIIDKYAERGL 455 (885)
T ss_dssp CCCCCTTTCCCCCBBCSS--SS-------CBCBCCCCSGGGTSSSSCCC------------STTTTTHHHHHHHHTTTTC
T ss_pred cccCCcccceEEEEEEec--CC-------cEEEEEeCCHHHHHHhccCc------------hhhHHHHHHHHHHHHhCCC
Confidence 999999999999887642 33 56788999999999999732 1122346667789999999
Q ss_pred eeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 399 RVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 399 rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
|++++|++++++++ .+..|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.+|.++|+++|+.
T Consensus 456 rvl~vA~~~~~~~~-------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 456 RSLAVARQVVPEKT-------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 528 (885)
T ss_dssp EEEEECCBCCCSSS-------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCT
T ss_pred eEEEEEEecccccc-------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCc
Confidence 99999999875421 24567899999999999999999999999999999999999999999999999999996
Q ss_pred C----Cccccchhhhc-cCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 479 T----THVSTGPDLEL-LSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 479 ~----~~~~~g~~~~~-~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
. ..+++|.+++. ++++++++.+.+..+|+|++|+||.++|+.+|++| +.|+|+|||.||+|||++||+||||++
T Consensus 529 ~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g-~~Vam~GDGvNDapaLk~AdvGIAmg~ 607 (885)
T 3b8c_A 529 TNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERK-HIVGMTGDGVNDAPALKKADIGIAVAD 607 (885)
T ss_dssp TCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTT-CCCCBCCCSSTTHHHHHHSSSCCCCSS
T ss_pred cccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCC-CeEEEEcCCchhHHHHHhCCEeEEeCC
Confidence 4 34677777765 66667788888899999999999999999999998 899999999999999999999999999
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhhh
Q 045750 554 GASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVG 633 (792)
Q Consensus 554 ~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 633 (792)
|++.+|++||+++.++++++|.+++++||++|+|+++++.|.++.|+..++..+...+ ..+.|++|.|++|+|++++..
T Consensus 608 gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~-~~~~~l~p~~il~i~l~~d~~ 686 (885)
T 3b8c_A 608 ATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL-IWEFDFSAFMVLIIAILNDGT 686 (885)
T ss_dssp SHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS-SCSSCSCHHHHHHHHHHHHTT
T ss_pred ccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999865544443333 445689999999999999977
Q ss_pred hhhcccCCCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHh--hhccc-----chHHHHHHH-HHHHHHH
Q 045750 634 QIAIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYY--EAYNQ-----MNVVFFRSA-WFVEGLL 705 (792)
Q Consensus 634 ~~~~~~~~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~--~~~~~-----~~~~~~~t~-~f~~lv~ 705 (792)
++++++|++++. ++|.+|..+.++..+++.|++.++..+.+|++.+... ....+ .....++|+ +|.++++
T Consensus 687 ~l~l~~~~~~~~--~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 764 (885)
T 3b8c_A 687 IMTISKDRVKPS--PTPDSWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSII 764 (885)
T ss_dssp TCCCCCCCCCCS--SCCCSTTTTTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSST
T ss_pred HHhhcccccCcc--cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHH
Confidence 788999887764 4566666666677777777777665544433221100 00001 012345555 4446677
Q ss_pred HHHHHHHHHhcCCcccccccchHHHHHHHHHHH-HHHHHhhhccccccccccccChhHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 706 MQTLIIHLIRTEKIPFIQEVASWPVLSSTLVIS-AIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIY 784 (792)
Q Consensus 706 ~q~~~~~~~r~~~~~~~~~~~n~~l~~~~~~~~-~l~~~~~~~pl~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~ 784 (792)
.|+ +.|++|++++++++. +++.+.+++++.. +++++..|.+ ..++++.|++|.+|+++++++++.+++.|+.|++.
T Consensus 765 ~~~-~~~~~Rs~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~ 841 (885)
T 3b8c_A 765 SQA-LIFVTRSRSWSFVER-PGALLMIAFLIAQLIATLIAVYAN-WEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAI 841 (885)
T ss_dssp TGG-GTTCSSSCTTTSTTS-TTTTTSGGGSSTTTTTTSSSSSCC-CCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHH
T ss_pred HHH-HHHHhccCCCCcccC-ccHHHHHHHHHHHHHHHHHHHhcc-ccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776 789999988666543 3444433333322 2222233321 23467999999999999999999999999999887
Q ss_pred HHh
Q 045750 785 ILI 787 (792)
Q Consensus 785 ~~~ 787 (792)
++.
T Consensus 842 ~~~ 844 (885)
T 3b8c_A 842 RYI 844 (885)
T ss_dssp TTC
T ss_pred HHh
Confidence 664
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-82 Score=729.52 Aligned_cols=495 Identities=24% Similarity=0.317 Sum_probs=431.7
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeE
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLV 84 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~ 84 (792)
+++...++.++++|+.++++++.++.|++++++|. ||++++|++++|+|||+|.|++||+|||||+|++|++ .
T Consensus 198 ~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~------dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~ 270 (736)
T 3rfu_A 198 VLLGQVLELKAREQTGSAIRALLKLVPESAHRIKE------DGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-F 270 (736)
T ss_dssp HHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEET------TEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEec------CCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-E
Confidence 34444555555566677888999999999988873 8999999999999999999999999999999999986 8
Q ss_pred EEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC-CCCCChHHHHHH
Q 045750 85 VSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDFEKGVR 163 (792)
Q Consensus 85 Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~-~~~~~~~~~~~~ 163 (792)
||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.++++.+.+++ ..+++++++..+
T Consensus 271 VDES~LTGES~Pv~K~~gd-------------~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d 337 (736)
T 3rfu_A 271 VDESMVTGEPIPVAKEASA-------------KVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLAD 337 (736)
T ss_dssp EECSSSTTCSSCEEECTTC-------------EECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHH
T ss_pred eeecccCCccccEEeccCC-------------cCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHH
Confidence 9999999999999999984 49999999999999999999999999999988764 334567899999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccc--chhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcc
Q 045750 164 RISFVLICVMLIVATIIILIDYFTSK--NLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241 (792)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~l 241 (792)
+++.++++++++++++.+++|++.+. .|..++..++++++++|||+|++++++++..+..+++|+|+++|+++++|+|
T Consensus 338 ~~a~~~v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l 417 (736)
T 3rfu_A 338 TVSGWFVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERM 417 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHh
Confidence 99999999998888888888776554 3889999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeC
Q 045750 242 GTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIP 321 (792)
Q Consensus 242 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~ 321 (792)
|++|++|||||||||+|+|++.++. ..+.+.++++.++ +..+..++||+++|+++++++.+.... ...+
T Consensus 418 ~~v~~i~fDKTGTLT~g~~~v~~i~-~~~~~~~~~l~~a---a~le~~s~hPla~Aiv~~a~~~~~~~~-------~~~~ 486 (736)
T 3rfu_A 418 EKVNTLVVDKTGTLTEGHPKLTRIV-TDDFVEDNALALA---AALEHQSEHPLANAIVHAAKEKGLSLG-------SVEA 486 (736)
T ss_dssp TSCCEEEECCBTTTBCSSCEEEEEE-ESSSCHHHHHHHH---HHHHHSSCCHHHHHHHHHHHTTCCCCC-------CCSC
T ss_pred cCCCEEEEeCCCCCcCCceEEEEEE-ecCCCHHHHHHHH---HHHhhcCCChHHHHHHHHHHhcCCCcc-------Cccc
Confidence 9999999999999999999999998 5566778888777 345678899999999999987765432 2335
Q ss_pred CCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeE
Q 045750 322 FDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVI 401 (792)
Q Consensus 322 f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl 401 (792)
|++.+++. +.... ++ . .+.+|+++.+.+.+... ..+.+..++++.+|+|++
T Consensus 487 f~~~~g~g-v~~~~---~g-------~--~~~~G~~~~~~~~~~~~----------------~~~~~~~~~~~~~G~~vl 537 (736)
T 3rfu_A 487 FEAPTGKG-VVGQV---DG-------H--HVAIGNARLMQEHGGDN----------------APLFEKADELRGKGASVM 537 (736)
T ss_dssp CCCCTTTE-EEECS---SS-------S--CEEEESHHHHHHHCCCC----------------HHHHHHHHHHHHTTCEEE
T ss_pred ccccCCce-EEEEE---CC-------E--EEEEcCHHHHHHcCCCh----------------hHHHHHHHHHHhcCCeEE
Confidence 66665542 22211 11 2 35679998876644321 234456688999999999
Q ss_pred EEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc
Q 045750 402 GVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH 481 (792)
Q Consensus 402 ~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~ 481 (792)
++|+ |.+++|+++++|++||+++++|++|+++|++++|+|||+..++..+++++|++.
T Consensus 538 ~va~--------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~-- 595 (736)
T 3rfu_A 538 FMAV--------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK-- 595 (736)
T ss_dssp EEEE--------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC--
T ss_pred EEEE--------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE--
Confidence 9997 348999999999999999999999999999999999999999999999999975
Q ss_pred cccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhh
Q 045750 482 VSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDL 561 (792)
Q Consensus 482 ~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ 561 (792)
++++++|++|.++++.+|+.+ +.|+|+|||.||+|||++||+|||||++++.++++
T Consensus 596 -----------------------v~a~~~P~~K~~~v~~l~~~g-~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~ 651 (736)
T 3rfu_A 596 -----------------------VVAEIMPEDKSRIVSELKDKG-LIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIES 651 (736)
T ss_dssp -----------------------EECSCCHHHHHHHHHHHHHHS-CCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHH
T ss_pred -----------------------EEEecCHHHHHHHHHHHHhcC-CEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHh
Confidence 899999999999999999999 89999999999999999999999999999999999
Q ss_pred cCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHH
Q 045750 562 ADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLS 605 (792)
Q Consensus 562 ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~ 605 (792)
||+|+.++++++|.+++++||++++|+++++.|.+.+|+..+..
T Consensus 652 AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~ipl 695 (736)
T 3rfu_A 652 AGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPL 695 (736)
T ss_dssp CSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999865433
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-79 Score=703.22 Aligned_cols=479 Identities=26% Similarity=0.297 Sum_probs=416.8
Q ss_pred HHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEEEeccccCCCc
Q 045750 16 EYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESW 95 (792)
Q Consensus 16 ~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~Vdes~ltGEs~ 95 (792)
++|++++++++.++.|++++|+| ||++++|+++||+|||+|.+++||+|||||+|++|++ .||||+|||||.
T Consensus 117 ~~~~~~~l~~l~~l~~~~a~v~r-------~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~ 188 (645)
T 3j08_A 117 KSRTGEAIKKLVGLQAKTAVVIR-------DGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPV 188 (645)
T ss_dssp HCCCCCCCHHHHHTSCSEEEEEE-------TTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSS
T ss_pred HHHHHHHHHHHhcCCCCEEEEEE-------CCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcE-EEEcccccCCCC
Confidence 33445677888899999999999 9999999999999999999999999999999999986 899999999999
Q ss_pred ccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHHHHHHHHHHHHHHHH
Q 045750 96 TAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEKGVRRISFVLICVML 174 (792)
Q Consensus 96 p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 174 (792)
|+.|+++ +.+|+||.+.+|.+.++|++||.+|.++++.+.+++.+ +++++++..++++.+++++++
T Consensus 189 Pv~K~~g-------------~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl 255 (645)
T 3j08_A 189 PVLKSKG-------------DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVL 255 (645)
T ss_dssp CEEECTT-------------CEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred ceecCCC-------------CEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHH
Confidence 9999988 45999999999999999999999999999999887644 567899999999999998888
Q ss_pred HHHHHhhhhhccc-ccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcccceeEEEecccc
Q 045750 175 IVATIIILIDYFT-SKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMDILCIDKTG 253 (792)
Q Consensus 175 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg~v~~i~~DKTG 253 (792)
+++++.++.+++. +.++..++..++++++++|||+|++++++++..+..+++|+|+++|+++++|+||++|++||||||
T Consensus 256 ~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTG 335 (645)
T 3j08_A 256 LVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTG 335 (645)
T ss_dssp HHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGG
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcc
Confidence 8888888777665 456778889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCCCCCCCeEEEEE
Q 045750 254 TLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVIL 333 (792)
Q Consensus 254 TLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~~~~k~~~v~~ 333 (792)
|||+|+|.+.++...+ .+.+++++++. ..+..+.||++.|+++++.+.|..... .......+. +....
T Consensus 336 TLT~~~~~v~~~~~~~-~~~~~~l~~aa---~~e~~s~hPla~Aiv~~a~~~g~~~~~--~~~~~~~~g----~g~~~-- 403 (645)
T 3j08_A 336 TLTKGKPEVTDLVPLN-GDERELLRLAA---IAERRSEHPIAEAIVKKALEHGIELGE--PEKVEVIAG----EGVVA-- 403 (645)
T ss_dssp TSSSSCCEEEEEEESS-SCHHHHHHHHH---HHHTTCCSHHHHHHHHHHHHTTCCCCS--CCCCEEETT----TEEEE--
T ss_pred cccCCCeEEEEEEeCC-CCHHHHHHHHH---HHhhcCCChhHHHHHHHHHhcCCCcCC--ccceEEecC----CceEE--
Confidence 9999999999998763 46677777773 456788999999999999887764321 111112210 00000
Q ss_pred eeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCcc
Q 045750 334 ETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKS 413 (792)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~ 413 (792)
..+.+|+++.+.+.... .. +.+.+..++++.+|+|++++++
T Consensus 404 ----------------~~v~~g~~~~~~~~~~~-----------~~----~~~~~~~~~~~~~g~~~l~va~-------- 444 (645)
T 3j08_A 404 ----------------DGILVGNKRLMEDFGVA-----------VS----NEVELALEKLEREAKTAVIVAR-------- 444 (645)
T ss_dssp ----------------TTEEEECHHHHHHTTCC-----------CC----HHHHHHHHHHHTTTCCCEEEEE--------
T ss_pred ----------------EEEEECCHHHHHhcCCC-----------cc----HHHHHHHHHHHhcCCeEEEEEE--------
Confidence 12456887766543221 11 2355566788999999999987
Q ss_pred ccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCH
Q 045750 414 AQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQ 493 (792)
Q Consensus 414 ~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~ 493 (792)
|++++|+++++|++||+++++|++|+++|++++|+|||+..++.++++++|++.
T Consensus 445 ------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-------------- 498 (645)
T 3j08_A 445 ------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------- 498 (645)
T ss_dssp ------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------
T ss_pred ------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE--------------
Confidence 358999999999999999999999999999999999999999999999999974
Q ss_pred HHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH
Q 045750 494 ESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV 573 (792)
Q Consensus 494 ~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~ 573 (792)
++++++|++|.++++.++++ +.|+|+|||.||++|+++||+|||||++++.++++||+++.++++++
T Consensus 499 -----------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~ 565 (645)
T 3j08_A 499 -----------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRD 565 (645)
T ss_dssp -----------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTH
T ss_pred -----------EEEeCCHHhHHHHHHHHhhC--CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHH
Confidence 89999999999999999987 57999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHH
Q 045750 574 LVAGVERGRVTFGNTMKYIKMSIIANLGGVLS 605 (792)
Q Consensus 574 i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~ 605 (792)
+.+++++||++++|+++++.|.+.+|+..+..
T Consensus 566 i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 566 VVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999864433
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-79 Score=710.20 Aligned_cols=481 Identities=26% Similarity=0.295 Sum_probs=418.6
Q ss_pred HHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEEEeccccCC
Q 045750 14 YQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGE 93 (792)
Q Consensus 14 ~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~Vdes~ltGE 93 (792)
++++|++++++++.++.|++++|+| ||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+||||
T Consensus 193 ~~~~~~~~~i~~l~~l~~~~a~v~r-------~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGE 264 (723)
T 3j09_A 193 RAKSRTGEAIKKLVGLQAKTAVVIR-------DGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGE 264 (723)
T ss_dssp HHHTTCCCTTHHHHHTSCSEEEEEE-------TTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCCCeeEEEE-------CCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCe-EEecccccCC
Confidence 3333445677888889999999999 9999999999999999999999999999999999986 8999999999
Q ss_pred CcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHHHHHHHHHHHHH
Q 045750 94 SWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKGVRRISFVLICV 172 (792)
Q Consensus 94 s~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 172 (792)
|.|+.|.++ +.+|+||.+.+|.+.++|++||.+|.++++.+.+++. .+++++++..++++.+++++
T Consensus 265 S~pv~K~~g-------------~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 265 PVPVLKSKG-------------DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp SSCEEECTT-------------CEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred CcceeecCC-------------CeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 999999988 4599999999999999999999999999999988764 45688999999999999998
Q ss_pred HHHHHHHhhhhhccc-ccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcccceeEEEecc
Q 045750 173 MLIVATIIILIDYFT-SKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMDILCIDK 251 (792)
Q Consensus 173 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg~v~~i~~DK 251 (792)
+++++++.++++++. +.++..++..++++++++|||+|++++++++..+..+++|+|+++|+++++|+||++|++||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcC
Confidence 888888888777665 4567888999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCCCCCCCeEEE
Q 045750 252 TGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSV 331 (792)
Q Consensus 252 TGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~~~~k~~~v 331 (792)
|||||+|+|++.++.+.+ .+.++++.++. ..+..+.||++.|+++++.+.|..... .......+. +....
T Consensus 412 TGTLT~g~~~v~~~~~~~-~~~~~~l~~aa---~~e~~s~hP~~~Ai~~~a~~~~~~~~~--~~~~~~~~g----~g~~~ 481 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVPLN-GDERELLRLAA---IAERRSEHPIAEAIVKKALEHGIELGE--PEKVEVIAG----EGVVA 481 (723)
T ss_dssp HHHTSCSCCEEEEEEESS-SCHHHHHHHHH---HHHTTCCSHHHHHHHHHHHHTTCCCCS--CCCCEEETT----TEEEE
T ss_pred CCccccCceEEEEEEeCC-CCHHHHHHHHH---HHhccCCCchhHHHHHHHHhcCCCcCC--ccceEEecC----CceEE
Confidence 999999999999998763 46677777763 456788999999999999887764321 111112220 11100
Q ss_pred EEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCC
Q 045750 332 ILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQ 411 (792)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~ 411 (792)
..+.+|+++.+.+.... .. +.+.+..++++.+|+|++++++
T Consensus 482 ------------------~~~~~g~~~~~~~~~~~-----------~~----~~~~~~~~~~~~~g~~~~~va~------ 522 (723)
T 3j09_A 482 ------------------DGILVGNKRLMEDFGVA-----------VS----NEVELALEKLEREAKTAVIVAR------ 522 (723)
T ss_dssp ------------------TTEEEECHHHHHHTTCC-----------CC----HHHHHHHHHHHTTTCEEEEEEE------
T ss_pred ------------------EEEEECCHHHHHhcCCC-----------cc----HHHHHHHHHHHhcCCeEEEEEE------
Confidence 12456887776543221 11 2355667888999999999987
Q ss_pred ccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhcc
Q 045750 412 KSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELL 491 (792)
Q Consensus 412 ~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~ 491 (792)
|++++|+++++|++||+++++|++|+++|++++|+|||+..++..+++++|++.
T Consensus 523 --------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~------------ 576 (723)
T 3j09_A 523 --------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------ 576 (723)
T ss_dssp --------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE------------
T ss_pred --------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE------------
Confidence 459999999999999999999999999999999999999999999999999974
Q ss_pred CHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCc
Q 045750 492 SQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDL 571 (792)
Q Consensus 492 ~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~ 571 (792)
++++++|++|.++++.+|++ +.|+|+|||.||+|||++||+|||||++++.++++||+++.++++
T Consensus 577 -------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~ 641 (723)
T 3j09_A 577 -------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDL 641 (723)
T ss_dssp -------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCT
T ss_pred -------------EEccCCHHHHHHHHHHHhcC--CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCH
Confidence 89999999999999999987 579999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHH
Q 045750 572 NVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLS 605 (792)
Q Consensus 572 ~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~ 605 (792)
+++.+++++||+++.|+++++.|.+.+|+..+..
T Consensus 642 ~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 642 RDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999864443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-33 Score=289.75 Aligned_cols=260 Identities=23% Similarity=0.370 Sum_probs=204.3
Q ss_pred HHHHHHhhcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHH
Q 045750 220 KGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAIL 299 (792)
Q Consensus 220 ~~~~~~~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~ 299 (792)
.++.+++|+|+++|+++++|.|++++++|||||||||+|+|.+.++. +.++++.++ +..+..+.||+..|+.
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~-----~~~~~l~~~---~~~e~~s~hp~a~ai~ 75 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI-----GDSLSLAYA---ASVEALSSHPIAKAIV 75 (263)
Confidence 35678999999999999999999999999999999999999999875 345666665 4567789999999999
Q ss_pred HHHHhcCcccccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCC
Q 045750 300 AYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFT 379 (792)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~ 379 (792)
+++...|.... .......++ -+|....+-...-. -|
T Consensus 76 ~~~~~~g~~~~--~~~~~~~~~-------------------------------G~g~~~~~~~~~~~-----~G------ 111 (263)
T 2yj3_A 76 KYAKEQGVKIL--EVKDFKEIS-------------------------------GIGVRGKISDKIIE-----VK------ 111 (263)
Confidence 98865543210 000000000 01111110000000 00
Q ss_pred HHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEE
Q 045750 380 SEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKL 459 (792)
Q Consensus 380 ~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~ 459 (792)
. ..+|.+ +.+++ +..+.|.+.+.|+++|++.++++.|+++|++++|
T Consensus 112 ~-------------~~~~~~-~~~~~--------------------~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 157 (263)
T 2yj3_A 112 K-------------AENNND-IAVYI--------------------NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIII 157 (263)
Confidence 0 002222 22222 3378899999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccH
Q 045750 460 LTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDS 539 (792)
Q Consensus 460 ~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~ 539 (792)
+||++...+..+++++|+.. +|....|+.|.+.++.++..+ +.|+|||||.||+
T Consensus 158 ~T~~~~~~~~~~~~~~gl~~-------------------------~f~~~~p~~k~~~~~~l~~~~-~~~~~VGD~~~D~ 211 (263)
T 2yj3_A 158 LSGDKEDKVKELSKELNIQE-------------------------YYSNLSPEDKVRIIEKLKQNG-NKVLMIGDGVNDA 211 (263)
Confidence 99999999999999999964 677788999999999999888 7899999999999
Q ss_pred HHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHH
Q 045750 540 LALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKY 591 (792)
Q Consensus 540 ~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 591 (792)
+++++||+|++++++++..++.+|+++.++++..+.++++.+|+++.++++|
T Consensus 212 ~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 212 AALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 9999999999999888999999999999999999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=256.77 Aligned_cols=280 Identities=29% Similarity=0.377 Sum_probs=212.2
Q ss_pred HHHHHHhhcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHH
Q 045750 220 KGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAIL 299 (792)
Q Consensus 220 ~~~~~~~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~ 299 (792)
.|..+++|+|+++|+++++|++++++++|||||||||.+.+.+.++....+ +.++++.++ +..+..+.||++.|+.
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-~~~~~l~~~---~~~e~~s~hp~~~a~~ 83 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-DERELLRLA---AIAERRSEHPIAEAIV 83 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-CHHHHHHHH---HHHTTTCCSHHHHHHH
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-CHHHHHHHH---HHHhhcCCCHHHHHHH
Confidence 467889999999999999999999999999999999999999998877766 777777766 3457789999999999
Q ss_pred HHHHhcCcccccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCC
Q 045750 300 AYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFT 379 (792)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~ 379 (792)
+++.+.|..... ......++ ...... ..+.+|.++.+.+.+.. .+
T Consensus 84 ~~~~~~g~~~~~--~~~~~~~~----G~~~~~------------------~~~~~g~~~~~~~~~~~-----------~~ 128 (287)
T 3a1c_A 84 KKALEHGIELGE--PEKVEVIA----GEGVVA------------------DGILVGNKRLMEDFGVA-----------VS 128 (287)
T ss_dssp HHHHHTTCCCCC--CSCEEEET----TTEEEE------------------TTEEEECHHHHHHTTCC-----------CC
T ss_pred HHHHhcCCCccc--cccceeec----CCCeEE------------------EEEEECCHHHHHhcCCC-----------cc
Confidence 999877764211 11111111 000000 01334655443321111 11
Q ss_pred HHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEE
Q 045750 380 SEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKL 459 (792)
Q Consensus 380 ~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~ 459 (792)
+ .+.+..+.+..+|.+++++++. ..+.+.+...++++|++.++++.|+++|+++.+
T Consensus 129 ~----~~~~~~~~~~~~g~~~i~~~~d--------------------~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 184 (287)
T 3a1c_A 129 N----EVELALEKLEREAKTAVIVARN--------------------GRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 184 (287)
T ss_dssp H----HHHHHHHHHHHTTCEEEEEEET--------------------TEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEE
T ss_pred H----HHHHHHHHHHhCCCeEEEEEEC--------------------CEEEEEEEeccccchhHHHHHHHHHHCCCeEEE
Confidence 1 2334456777889999998863 378899999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccH
Q 045750 460 LTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDS 539 (792)
Q Consensus 460 ~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~ 539 (792)
+||++...+..+.+.+|+.. .|....|..|...++.++.. +.++++||+.||+
T Consensus 185 ~T~~~~~~~~~~l~~~gl~~-------------------------~f~~i~~~~K~~~~~~l~~~--~~~~~vGDs~~Di 237 (287)
T 3a1c_A 185 ITGDNWRSAEAISRELNLDL-------------------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDA 237 (287)
T ss_dssp ECSSCHHHHHHHHHHHTCSE-------------------------EECSCCTTCHHHHHHHHTTT--CCEEEEECTTTCH
T ss_pred EeCCCHHHHHHHHHHhCCce-------------------------eeeecChHHHHHHHHHHhcC--CeEEEEECCHHHH
Confidence 99999999999999999964 66667799999999998876 5688999999999
Q ss_pred HHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHH
Q 045750 540 LALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTM 589 (792)
Q Consensus 540 ~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 589 (792)
+|.+.||++++++++.+..++.+|+++.++++..+.++++.+|+++.+++
T Consensus 238 ~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 238 PALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 99999999999998777777889999988899999999999999988764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-26 Score=237.19 Aligned_cols=276 Identities=25% Similarity=0.344 Sum_probs=209.6
Q ss_pred cccchhhhcccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCccccc
Q 045750 232 VKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQA 311 (792)
Q Consensus 232 vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~ 311 (792)
+|+++++|.+++++.|+||++||||.|++.+.++....+ +.++++.++ ...+..+.+|...++.+++...|....
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-~~~~~~~~~---~~~~~~s~~~~~~a~~~~~~~~g~~~~- 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-SEDELLQIA---ASLEARSEHPIAAAIVEEAEKRGFGLT- 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-CHHHHHHHH---HHHHTTCCSHHHHHHHHHHHHTTCCCC-
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-CHHHHHHHH---HHhhccCCCHHHHHHHHHHHhcCCCCC-
Confidence 588999999999999999999999999999999988777 777777766 334667889999999999987776431
Q ss_pred ccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHH
Q 045750 312 SKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGE 391 (792)
Q Consensus 312 ~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (792)
.......++ .+.....+. + ..+..|.++.+.+...... ....
T Consensus 76 -~~~~~~~~~----g~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~~-------------------~~~~ 117 (280)
T 3skx_A 76 -EVEEFRAIP----GKGVEGIVN-------------G-RRYMVVSPGYIRELGIKTD-------------------ESVE 117 (280)
T ss_dssp -CCEEEEEET----TTEEEEEET-------------T-EEEEEECHHHHHHTTCCCC-------------------TTHH
T ss_pred -CccceeecC----CCEEEEEEC-------------C-EEEEEecHHHHHHcCCCch-------------------HHHH
Confidence 222233332 112222221 1 1233466666554332210 1124
Q ss_pred HHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 045750 392 ELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKI 471 (792)
Q Consensus 392 ~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~i 471 (792)
++...+.+.+.+++ +..++|.+.+.++++|++.++++.|++.|+++.++||++...+..+
T Consensus 118 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~ 177 (280)
T 3skx_A 118 KLKQQGKTVVFILK--------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWV 177 (280)
T ss_dssp HHHTTTCEEEEEEE--------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred HHHhCCCeEEEEEE--------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 56677888777665 2378999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 472 CHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 472 a~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
.+++|+.. .|....|.+|...++.+.+.. .++++||+.||++|++.||+|++|
T Consensus 178 ~~~~gl~~-------------------------~f~~~~~~~k~~~~k~~~~~~--~~~~vGD~~nDi~~~~~Ag~~va~ 230 (280)
T 3skx_A 178 AEELGLDD-------------------------YFAEVLPHEKAEKVKEVQQKY--VTAMVGDGVNDAPALAQADVGIAI 230 (280)
T ss_dssp HHHHTCSE-------------------------EECSCCGGGHHHHHHHHHTTS--CEEEEECTTTTHHHHHHSSEEEEC
T ss_pred HHHcCChh-------------------------HhHhcCHHHHHHHHHHHHhcC--CEEEEeCCchhHHHHHhCCceEEe
Confidence 99999964 677888999999999999876 468999999999999999999999
Q ss_pred cCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHH
Q 045750 552 DSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSII 597 (792)
Q Consensus 552 ~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 597 (792)
+++++..++.||+++..++++++.++++.+|+++.++++++.|++.
T Consensus 231 ~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 231 GAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SCCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred cCCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999988764
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.93 E-value=7.3e-26 Score=197.17 Aligned_cols=108 Identities=24% Similarity=0.262 Sum_probs=101.8
Q ss_pred HHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEEEeccccCCCccccccc
Q 045750 22 AAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTGESWTAEKTA 101 (792)
Q Consensus 22 ~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~Vdes~ltGEs~p~~k~~ 101 (792)
++++|.++.|++++|+| +|++++|++++|+|||+|.+++||+|||||++++|. +.||||+|||||.|+.|.+
T Consensus 2 al~~L~~l~p~~a~v~r-------~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~ 73 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIR-------DGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSK 73 (113)
T ss_dssp HHHHHHHHSCSEEEEEE-------TTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECT
T ss_pred HHHHHhcCCCCEEEEEE-------CCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECC
Confidence 56788889999999999 999999999999999999999999999999999998 5999999999999999998
Q ss_pred ccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhc
Q 045750 102 DIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIG 150 (792)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~ 150 (792)
+ +.+|+||.+.+|.+.++|++||.+|.+|++.+.++
T Consensus 74 g-------------~~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~ 109 (113)
T 2hc8_A 74 G-------------DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVE 109 (113)
T ss_dssp T-------------CEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHH
T ss_pred C-------------CEEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHH
Confidence 8 55999999999999999999999999999988764
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=199.29 Aligned_cols=119 Identities=24% Similarity=0.289 Sum_probs=104.8
Q ss_pred HHhHHHHHHHHhccCCCCeEEEecCCccccCC---eEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEEEeccccC
Q 045750 16 EYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSE---LIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQSSLTG 92 (792)
Q Consensus 16 ~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g---~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~Vdes~ltG 92 (792)
++|+++++++|.++.|++++|+|+.. ++ .+++|++++|+|||+|.+++||+|||||+|++|.+ .||||+|||
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~----~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTG 76 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDS----DNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITG 76 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSS----STTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCC----CCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccC
Confidence 46788899999999999999999321 22 26889999999999999999999999999999998 999999999
Q ss_pred CCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC
Q 045750 93 ESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ 152 (792)
Q Consensus 93 Es~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~ 152 (792)
||.|+.|.++ +.+|+||.+.+|.+.+.|++||.+|.+|++.+.++..
T Consensus 77 Es~pv~k~~g-------------~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 77 EAMPVAKKPG-------------STVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp CSSCEECCTT-------------EEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred CCccEEeCCC-------------CEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999988 5699999999999999999999999999999887653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=185.21 Aligned_cols=164 Identities=39% Similarity=0.595 Sum_probs=137.7
Q ss_pred EEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCCCCCCCeEEEEEeeCCCCc
Q 045750 261 IMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITE 340 (792)
Q Consensus 261 ~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~ 340 (792)
.+...++..+.+.++++.+|.+++..+...+||+|.|+++++...+.......|+.++++||+|+||+|+++++.+ ++
T Consensus 3 ~l~~~~d~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~--~g 80 (170)
T 3gwi_A 3 VLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAEN--TE 80 (170)
T ss_dssp EEEEEECTTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESS--SS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeC--CC
Confidence 4567788889999999999999998888889999999999875433333456799999999999999999999753 23
Q ss_pred cccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCC
Q 045750 341 DRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420 (792)
Q Consensus 341 ~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~ 420 (792)
.+++++|||||.|+++|+.. ..+|...|++++.++.+.+..++++.+|+||+++|||.++..... ..
T Consensus 81 -------~~~l~~KGApE~IL~~C~~~--~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~----~~ 147 (170)
T 3gwi_A 81 -------HHQLVCKGALQEILNVCSQV--RHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD----YQ 147 (170)
T ss_dssp -------EEEEEEEECHHHHHTTEEEE--EETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC----CC
T ss_pred -------CEEEEEcCCcHHHHHHhHHH--hcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc----cC
Confidence 67899999999999999987 468888999999999999999999999999999999998654211 12
Q ss_pred CCCCCCcEEEEecccCCCC
Q 045750 421 GPIESDMVFLGLITFYDPP 439 (792)
Q Consensus 421 ~~~e~~l~~lG~i~~~d~~ 439 (792)
.+.|+||+|+|+++|-|.-
T Consensus 148 ~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 148 RADESDLILEGYIAFLDHH 166 (170)
T ss_dssp GGGSCSEEEEEEEEEEC--
T ss_pred ccccCCcEEEehhcccccc
Confidence 3469999999999998853
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-21 Score=201.81 Aligned_cols=144 Identities=13% Similarity=0.097 Sum_probs=112.6
Q ss_pred ccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc--cccchhhhccCHHHHHHhh--hcceEEEEe
Q 045750 434 TFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH--VSTGPDLELLSQESFHERV--KRATVLARL 509 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~--~~~g~~~~~~~~~~~~~~~--~~~~v~~~~ 509 (792)
...+++||+++++++.|+++|++++|+||+...++.++++++|+.... +..+. + ..+++.....+ .....+++.
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~-l-~~~~~~~~~~~~~~~i~~~~k~ 214 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNF-M-DFDENGVLKGFKGELIHVFNKH 214 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEEC-E-EECTTSBEEEECSSCCCTTCHH
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeee-E-EEcccceeEeccccccchhhcc
Confidence 346899999999999999999999999999999999999999986432 11111 1 11111100000 012245566
Q ss_pred ChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHH---hCCeeEEec-------CCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 510 TPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALD---AANVGISVD-------SGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 510 ~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~---~A~vgia~~-------~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.|.+|...+..+++.+ +.|+|+|||.||+||++ +||+||+|| ++.+.+++++|+|+++|++..++.+|.
T Consensus 215 ~~~~k~~~~~~~~~~~-~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 215 DGALKNTDYFSQLKDN-SNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHHTCHHHHHHTTTC-CEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred cHHHHHHHHHHhhccC-CEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 7888888888888888 88999999999999954 999999999 778889999999999999999999885
Q ss_pred H
Q 045750 580 R 580 (792)
Q Consensus 580 ~ 580 (792)
+
T Consensus 294 ~ 294 (297)
T 4fe3_A 294 Q 294 (297)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.46 E-value=6.5e-14 Score=136.00 Aligned_cols=127 Identities=17% Similarity=0.224 Sum_probs=107.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcC
Q 045750 446 ALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVG 525 (792)
Q Consensus 446 ~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~ 525 (792)
+++.|+++|+++.++||++...+..+++++|+.. .|... ..|.+.++.+.+..
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~-------------------------~f~~~--~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH-------------------------LFQGR--EDKLVVLDKLLAEL 106 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-------------------------HhcCc--CChHHHHHHHHHHc
Confidence 9999999999999999999999999999999964 33322 66777777666541
Q ss_pred ---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCC----chHHHHHHHHhHHhHHhHHHHHHHHHHH
Q 045750 526 ---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD----LNVLVAGVERGRVTFGNTMKYIKMSIIA 598 (792)
Q Consensus 526 ---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~----~~~i~~~i~~gR~~~~~i~~~i~~~l~~ 598 (792)
.+.++++||+.||++|++.||++++++++.+..++.||+++.+++ +..+.+.+..+|..+.++++++.|.+.+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 186 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEGHHH 186 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTTC--
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhccccc
Confidence 267889999999999999999999999999999999999998765 5667788888999999999999988877
Q ss_pred H
Q 045750 599 N 599 (792)
Q Consensus 599 ~ 599 (792)
|
T Consensus 187 ~ 187 (189)
T 3mn1_A 187 H 187 (189)
T ss_dssp -
T ss_pred c
Confidence 6
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-12 Score=139.69 Aligned_cols=147 Identities=16% Similarity=0.151 Sum_probs=108.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE-----eChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR-----LTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~-----~~p~ 512 (792)
+++|++.++++.|+++|+++.++||+....+..+.+++|+... ..+ .+...+ ..+..+ ..+.
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~--~~~-~l~~~d----------~~~tg~~~~~~~~~k 244 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYA--QSN-TLEIVS----------GKLTGQVLGEVVSAQ 244 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEE--EEE-EEEEET----------TEEEEEEESCCCCHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeE--Eee-eeEeeC----------CeeeeeecccccChh
Confidence 7899999999999999999999999999999999999999531 000 000000 000011 1123
Q ss_pred hHHHHHHH----HhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhH
Q 045750 513 QKLRVVQS----LQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNT 588 (792)
Q Consensus 513 ~K~~iv~~----l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i 588 (792)
.|.+.++. ++-.. +.++++|||.||++|++.||+|++| ++.+..++.||.++..+++.++..+++.......++
T Consensus 245 pk~~~~~~~~~~lgi~~-~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~ 322 (335)
T 3n28_A 245 TKADILLTLAQQYDVEI-HNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKL 322 (335)
T ss_dssp HHHHHHHHHHHHHTCCG-GGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHcCCCh-hhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhh
Confidence 45444444 43334 6789999999999999999999999 999999999999999999999999999888778899
Q ss_pred HHHHHHHHHHH
Q 045750 589 MKYIKMSIIAN 599 (792)
Q Consensus 589 ~~~i~~~l~~~ 599 (792)
+.+++|...+|
T Consensus 323 ~~~~~~~~~~~ 333 (335)
T 3n28_A 323 SWKSKEGHHHH 333 (335)
T ss_dssp CCC--------
T ss_pred ccccccccccc
Confidence 99999988876
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.36 E-value=3.9e-12 Score=127.25 Aligned_cols=145 Identities=14% Similarity=0.101 Sum_probs=108.7
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-c------cc--cchhh-hc---------------
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT-H------VS--TGPDL-EL--------------- 490 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~-~------~~--~g~~~-~~--------------- 490 (792)
..++.+++.++|++|+++|++++++|||+...+..+++++|++.. . +. +|+.+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999998641 1 11 22222 00
Q ss_pred ----------------------cCHHHHHHhhh--cceEE-----EEeCh--hhHHHHHHHHhhcC---CCEEEEEcCCc
Q 045750 491 ----------------------LSQESFHERVK--RATVL-----ARLTP--TQKLRVVQSLQSVG---KHVVGFLGDGI 536 (792)
Q Consensus 491 ----------------------~~~~~~~~~~~--~~~v~-----~~~~p--~~K~~iv~~l~~~~---~~~v~~iGDg~ 536 (792)
.+.+...+... ...+. .+..| .+|...++.+.+.. .+.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 01111111111 12222 22334 68999888887652 15689999999
Q ss_pred ccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 537 NDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 537 ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
||.+|++.|++|++|+++.+.+++.||+++.+++.++|.+++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999998864
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=4.4e-12 Score=122.08 Aligned_cols=133 Identities=13% Similarity=0.096 Sum_probs=105.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVV 518 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv 518 (792)
+.+++.++|++|+++|++++++||++...+..+++++|+.. .|.. ...|.+.+
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-------------------------~~~~--~k~k~~~~ 88 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------------FFLG--KLEKETAC 88 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------------EEES--CSCHHHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce-------------------------eecC--CCCcHHHH
Confidence 34677899999999999999999999999999999999964 2322 24566666
Q ss_pred HHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHH----HHHHHhHHhHHhHHHH
Q 045750 519 QSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLV----AGVERGRVTFGNTMKY 591 (792)
Q Consensus 519 ~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~----~~i~~gR~~~~~i~~~ 591 (792)
+.+.+. + .+.++++||+.||++|++.|+++++++++.+.+++.||+++.+++..++. +.+...|..+.+++.+
T Consensus 89 ~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~ 168 (180)
T 1k1e_A 89 FDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVFDTA 168 (180)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHHHCH
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhhhhc
Confidence 555443 2 15688999999999999999999999999999999999999888766666 3334566667777777
Q ss_pred HHHHHHH
Q 045750 592 IKMSIIA 598 (792)
Q Consensus 592 i~~~l~~ 598 (792)
+.|..+-
T Consensus 169 ~~~~~~~ 175 (180)
T 1k1e_A 169 QGFLKSV 175 (180)
T ss_dssp HHHHHHG
T ss_pred cchhhhh
Confidence 7666543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-12 Score=126.46 Aligned_cols=116 Identities=14% Similarity=0.209 Sum_probs=92.0
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 445 QALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 445 ~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
..|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.+.+.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-------------------------~~~~~--k~k~~~~~~~~~~ 111 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL-------------------------IYQGQ--DDKVQAYYDICQK 111 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-------------------------EECSC--SSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-------------------------EeeCC--CCcHHHHHHHHHH
Confidence 46999999999999999999999999999999964 33322 4566665555443
Q ss_pred C---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH----HHHHHHHhHHhHHh
Q 045750 525 G---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV----LVAGVERGRVTFGN 587 (792)
Q Consensus 525 ~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~----i~~~i~~gR~~~~~ 587 (792)
. .+.++++||+.||++|++.|+++++|+++.+.+++.||+++.+++-.+ +.+.+...|..+.+
T Consensus 112 ~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~~ 181 (195)
T 3n07_A 112 LAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELDV 181 (195)
T ss_dssp HCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSCC
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHHH
Confidence 1 167889999999999999999999999999999999999998877655 44444455544443
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.26 E-value=4.1e-11 Score=124.18 Aligned_cols=68 Identities=28% Similarity=0.382 Sum_probs=59.4
Q ss_pred hHHHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++ | .+.++++||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 677766666554 1 1568999999999999999999999999999999999999999999999999965
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-11 Score=119.77 Aligned_cols=122 Identities=12% Similarity=0.130 Sum_probs=97.7
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe--ChhhHHHHHHHHhh
Q 045750 446 ALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL--TPTQKLRVVQSLQS 523 (792)
Q Consensus 446 ~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~iv~~l~~ 523 (792)
+|+.|+++|+++.++||++...+..+++++|+.. +|... .|+-...+++.++-
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-------------------------~~~~~kpk~~~~~~~~~~~~~ 108 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-------------------------YYKGQVDKRSAYQHLKKTLGL 108 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-------------------------EECSCSSCHHHHHHHHHHHTC
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-------------------------ceeCCCChHHHHHHHHHHhCC
Confidence 5999999999999999999999999999999964 33322 34444555555554
Q ss_pred cCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH----HHHHHHHhHHhHHhHHHHHH
Q 045750 524 VGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV----LVAGVERGRVTFGNTMKYIK 593 (792)
Q Consensus 524 ~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~----i~~~i~~gR~~~~~i~~~i~ 593 (792)
.. +.++++||+.||++|++.|+++++++++.+..++.||+++.+++..+ +.+.+...|..+.++.+.+.
T Consensus 109 ~~-~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~ 181 (191)
T 3n1u_A 109 ND-DEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYL 181 (191)
T ss_dssp CG-GGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CH-HHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 45 67899999999999999999999999999999999999998887555 45555667777766655543
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.25 E-value=8.2e-12 Score=117.77 Aligned_cols=115 Identities=15% Similarity=0.149 Sum_probs=91.6
Q ss_pred CcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HhCCCCCccccchhhhccCHHHHHHhhhcc
Q 045750 426 DMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH--EVGIRTTHVSTGPDLELLSQESFHERVKRA 503 (792)
Q Consensus 426 ~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~--~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~ 503 (792)
+...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ ++|+.
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 3455666666666 3899999999999999999 67888888 56663
Q ss_pred eEEEEeChhhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHH
Q 045750 504 TVLARLTPTQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 504 ~v~~~~~p~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
+| ..+++|.+.++.+.+.. .+.++++||+.||++|++.|+++++|+++.+.+++.||+|+.+++-++++.
T Consensus 77 -~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~ 149 (168)
T 3ewi_A 77 -TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAIR 149 (168)
T ss_dssp -EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHHH
T ss_pred -EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHHH
Confidence 11 12356777777776642 257899999999999999999999999999999999999999887777433
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=8.9e-11 Score=122.36 Aligned_cols=69 Identities=16% Similarity=0.116 Sum_probs=60.3
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 512 TQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 512 ~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
..|...++.+.++- .+.++++||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 45777777766542 1568999999999999999999999999999999999999999999999999964
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.9e-11 Score=124.78 Aligned_cols=145 Identities=19% Similarity=0.187 Sum_probs=102.8
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc-cccchhhh----------cc-------------
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH-VSTGPDLE----------LL------------- 491 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~-~~~g~~~~----------~~------------- 491 (792)
...+.+.+.++|++++++|++++++|||+...+..+.+.+|++... ..+|..+. .+
T Consensus 36 ~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~ 115 (285)
T 3pgv_A 36 DHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVR 115 (285)
T ss_dssp TSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHh
Confidence 3468899999999999999999999999999999999999984210 00000000 00
Q ss_pred --------------------------------------------------------CHHHHHH---h----hhc-ceE--
Q 045750 492 --------------------------------------------------------SQESFHE---R----VKR-ATV-- 505 (792)
Q Consensus 492 --------------------------------------------------------~~~~~~~---~----~~~-~~v-- 505 (792)
+.+.... . ... ..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 195 (285)
T 3pgv_A 116 NDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSF 195 (285)
T ss_dssp TCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred hcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 1111111 1 110 111
Q ss_pred ----EEEeCh--hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC--EEeccCCchHH
Q 045750 506 ----LARLTP--TQKLRVVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLAD--IILLEKDLNVL 574 (792)
Q Consensus 506 ----~~~~~p--~~K~~iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad--~vl~~~~~~~i 574 (792)
+....| ..|...++.+.++-+ +.++++||+.||++|++.|++||||+|+.+.+|+.|| .++.+++.++|
T Consensus 196 s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGv 275 (285)
T 3pgv_A 196 STLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAV 275 (285)
T ss_dssp SSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHH
T ss_pred eCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchH
Confidence 112222 357777777665421 5689999999999999999999999999999999998 47888999999
Q ss_pred HHHHHH
Q 045750 575 VAGVER 580 (792)
Q Consensus 575 ~~~i~~ 580 (792)
.++|++
T Consensus 276 a~~i~~ 281 (285)
T 3pgv_A 276 PRYLRK 281 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.1e-11 Score=118.68 Aligned_cols=100 Identities=16% Similarity=0.218 Sum_probs=86.4
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc-
Q 045750 446 ALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV- 524 (792)
Q Consensus 446 ~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~- 524 (792)
+++.|+++|+++.++||++...+..+++++|+.. +|... ..|.+.++.+.+.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~-------------------------~f~~~--k~K~~~l~~~~~~l 136 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH-------------------------LYQGQ--SDKLVAYHELLATL 136 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-------------------------EECSC--SSHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-------------------------hhccc--CChHHHHHHHHHHc
Confidence 8999999999999999999999999999999964 33333 5677777766654
Q ss_pred ---CCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH
Q 045750 525 ---GKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV 573 (792)
Q Consensus 525 ---~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~ 573 (792)
. +.++++||+.||++|+++|+++++++++.+.+++.||+++.+++-.+
T Consensus 137 g~~~-~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 137 QCQP-EQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp TCCG-GGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTT
T ss_pred CcCc-ceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCc
Confidence 4 67899999999999999999999999999999999999998775444
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.19 E-value=7.6e-11 Score=112.79 Aligned_cols=105 Identities=15% Similarity=0.174 Sum_probs=88.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcC
Q 045750 446 ALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVG 525 (792)
Q Consensus 446 ~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~ 525 (792)
+++.|+++|+++.++||++...+..+++++|+. ++.+ ...|.+.++.+.+..
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---~~~~-------------------------~~~k~~~l~~~~~~~ 98 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---VLHG-------------------------IDRKDLALKQWCEEQ 98 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---EEES-------------------------CSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---eEeC-------------------------CCChHHHHHHHHHHc
Confidence 899999999999999999999999999999986 2222 255666666665541
Q ss_pred ---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 526 ---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 526 ---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+.++++||+.||++|++.|+++++++++.+..++.||+++.+++..++...+
T Consensus 99 ~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 99 GIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred CCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 15688999999999999999999999999999999999999888866665544
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.4e-11 Score=124.21 Aligned_cols=69 Identities=17% Similarity=0.097 Sum_probs=60.7
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 512 TQKLRVVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
..|...++.+.++-+ +.++++||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 358877777766521 568999999999999999999999999999999999999999999999999864
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.6e-10 Score=118.17 Aligned_cols=68 Identities=22% Similarity=0.294 Sum_probs=58.2
Q ss_pred hHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSV---GKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~---~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++ ..+.++++||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 455556665553 12568999999999999999999999999999999999999999999999999864
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=7e-11 Score=121.61 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=61.0
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 512 TQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 512 ~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
..|...++.+.++- .+.++++||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 46777777776652 1568999999999999999999999999999999999999999999999999965
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=3.8e-11 Score=124.45 Aligned_cols=68 Identities=22% Similarity=0.227 Sum_probs=48.4
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++- .+.++++||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRK 267 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC-
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHHH
Confidence 4777777766642 1568999999999999999999999999999999999999999999999998853
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.5e-10 Score=119.53 Aligned_cols=69 Identities=25% Similarity=0.279 Sum_probs=59.7
Q ss_pred hhHHHHHHHHhhc---CCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 512 TQKLRVVQSLQSV---GKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 512 ~~K~~iv~~l~~~---~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
..|...++.+.++ ..+.++++||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3577666666553 12668999999999999999999999999999999999999999999999999865
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.8e-10 Score=119.44 Aligned_cols=69 Identities=19% Similarity=0.126 Sum_probs=60.3
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 512 TQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 512 ~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
..|...++.+.++- .+.++++||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 46777777766542 1568999999999999999999999999999999999999999999999999974
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.8e-09 Score=108.36 Aligned_cols=144 Identities=17% Similarity=0.206 Sum_probs=104.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc-cc-------chh---------------hh-c--
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV-ST-------GPD---------------LE-L-- 490 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~-~~-------g~~---------------~~-~-- 490 (792)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|++...+ .. ++. +. .
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999999999853111 11 110 00 0
Q ss_pred -c--------------------CHHHHHHhhh----cceEE-----EEeCh--hhHHHHHHHHhhc-C--CCEEEEEcCC
Q 045750 491 -L--------------------SQESFHERVK----RATVL-----ARLTP--TQKLRVVQSLQSV-G--KHVVGFLGDG 535 (792)
Q Consensus 491 -~--------------------~~~~~~~~~~----~~~v~-----~~~~p--~~K~~iv~~l~~~-~--~~~v~~iGDg 535 (792)
. ..+...+... ...+. ....| ..|...++.+.++ + .+.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0 1122222211 12222 12222 4677777776653 1 1568899999
Q ss_pred cccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 536 INDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 536 ~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.||.+|++.|+++++|+++.+..++.||+++.+++.+++.+++++
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 999999999999999999999999999999988888899888864
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.5e-10 Score=107.84 Aligned_cols=107 Identities=19% Similarity=0.278 Sum_probs=86.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcC
Q 045750 446 ALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVG 525 (792)
Q Consensus 446 ~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~ 525 (792)
+++.|+++|+++.++||++...+..+++++|+.. .|... ..|.+.++.+.+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------~~~~~--kpk~~~~~~~~~~~ 91 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-------------------------LFQGV--VDKLSAAEELCNEL 91 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-------------------------eeccc--CChHHHHHHHHHHc
Confidence 8999999999999999999999999999999964 23222 34555544444331
Q ss_pred ---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH-HHHHHH
Q 045750 526 ---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV-LVAGVE 579 (792)
Q Consensus 526 ---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~-i~~~i~ 579 (792)
.+.++++||+.||++|++.||++++++++.+..++.||+++.+++..+ +.++++
T Consensus 92 ~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 92 GINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp TCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred CCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 157899999999999999999999999999999999999999888666 555543
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=4.3e-10 Score=103.45 Aligned_cols=143 Identities=15% Similarity=0.188 Sum_probs=97.6
Q ss_pred cccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhc-CcccccccceEeEEeCCCCCCCeE
Q 045750 251 KTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTN-GYRFQASKWKKLDEIPFDFVRRKV 329 (792)
Q Consensus 251 KTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~-~~~~~~~~~~~~~~~~f~~~~k~~ 329 (792)
..||+|-|++++.++.+..+.++++++++| +..+..+.||+++||++++++. +.......-......+|+...++.
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~~e~elL~lA---As~E~~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~~ 89 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGVDEKTLADAA---QLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMS 89 (156)
T ss_dssp --------CEEEEEEEECTTSCHHHHHHHH---HHTTSSCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTEE
T ss_pred CCCceecCCCeEEEEEecCCCCHHHHHHHH---HHHhCcCCCHHHHHHHHHHHHhcCCCcccccccccceeeccccCCCC
Confidence 479999999999999888888899999988 4567889999999999999876 654321100012346788877766
Q ss_pred EEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecC
Q 045750 330 SVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLL 409 (792)
Q Consensus 330 ~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~ 409 (792)
.+.+ + + ..+.+|+++.|.+++... |. .+.+ .+.+..++++.+|.+++++|.
T Consensus 90 Gv~v-----~--------G-~~v~vGn~~~i~~l~~~~-----gi--~~~~----~~~~~~~~la~~G~T~v~VA~---- 140 (156)
T 1svj_A 90 GINI-----D--------N-RMIRKGSVDAIRRHVEAN-----GG--HFPT----DVDQKVDQVARQGATPLVVVE---- 140 (156)
T ss_dssp EEEE-----T--------T-EEEEEEEHHHHHHHHHHH-----TC--CCCH----HHHHHHHHHHHTTCEEEEEEE----
T ss_pred eEEE-----C--------C-EEEEEeCcHHHHHHHHHc-----CC--CCcH----HHHHHHHHHHhCCCCEEEEEE----
Confidence 7643 1 1 357899988777666422 10 1122 245566788999999999996
Q ss_pred CCccccCCCCCCCCCCCcEEEEecccCCCCCh
Q 045750 410 PQKSAQSNRNDGPIESDMVFLGLITFYDPPKD 441 (792)
Q Consensus 410 ~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~ 441 (792)
|..++|++++.|++||
T Consensus 141 ----------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 141 ----------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp ----------------TTEEEEEEEEEECCCC
T ss_pred ----------------CCEEEEEEEEecCCCC
Confidence 3489999999999996
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.01 E-value=1e-10 Score=124.36 Aligned_cols=162 Identities=18% Similarity=0.259 Sum_probs=109.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccc----h------------------hhhccCHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTG----P------------------DLELLSQES 495 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g----~------------------~~~~~~~~~ 495 (792)
++++++.++++.|++ |+++.++||+....+....+.+++... .... . .+....+++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh-hcccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 568999999999999 999999999997777777888887321 1111 0 000000011
Q ss_pred HHHhhhc-------ceEE---EEeChhhHHHHHHHHhhc-CCCEEEEEcCCcccHHHHHhC----CeeEEecCCcHHHHh
Q 045750 496 FHERVKR-------ATVL---ARLTPTQKLRVVQSLQSV-GKHVVGFLGDGINDSLALDAA----NVGISVDSGASVAKD 560 (792)
Q Consensus 496 ~~~~~~~-------~~v~---~~~~p~~K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~A----~vgia~~~~~~~~~~ 560 (792)
+ +.+.. ..+. --..+.+|...++.+... +.+.|+++||+.||++|++.| |+|||| |+.+.+|+
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 11100 0000 011356788888755432 113388999999999999999 999999 99999999
Q ss_pred hcCEEeccCCchHHHHHH----HHhHHhHHhHHH-------HHHHHHHHHHHHHH
Q 045750 561 LADIILLEKDLNVLVAGV----ERGRVTFGNTMK-------YIKMSIIANLGGVL 604 (792)
Q Consensus 561 ~ad~vl~~~~~~~i~~~i----~~gR~~~~~i~~-------~i~~~l~~~~~~~~ 604 (792)
.||+|+.+++.++|.++| .+||..+ ++.+ ++.+..+.|+..++
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEVL 312 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHHH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHHH
Confidence 999999999998887766 5688777 6666 55555555544443
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=6.5e-10 Score=110.09 Aligned_cols=129 Identities=19% Similarity=0.170 Sum_probs=97.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceE---EEE--e
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATV---LAR--L 509 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v---~~~--~ 509 (792)
-++.|++.+.++.|+++|++++++|+.....+..+.+.+|+... .++...+ ..+ ++. .
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~---------------~~~~~~~~~~~~ 138 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEN---------------DALNGLVTGHMM 138 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET---------------TEEEEEEEESCC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeC---------------CEEEeeeccCCC
Confidence 45889999999999999999999999999999999999998631 0000000 000 011 1
Q ss_pred ChhhHHHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 510 TPTQKLRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 510 ~p~~K~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
....|.++++.+.+. + .+.++++||+.||++|++.||++++| ++.+..++.||+++.++++..+..+++.-
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 245666666655543 1 15688999999999999999999999 88999999999999999999988877543
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.2e-09 Score=119.72 Aligned_cols=136 Identities=19% Similarity=0.248 Sum_probs=105.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe-----Chh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL-----TPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-----~p~ 512 (792)
++.|++.+.++.|+++|+++.++||.....+..+++++|+.... .. .+... ...+..+. .++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~--~~-~l~~~----------dg~~tg~~~~~v~~~k 322 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVA--AN-ELEIV----------DGTLTGRVVGPIIDRA 322 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEE--EE-CEEEE----------TTEEEEEECSSCCCHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcccee--ee-eEEEe----------CCEEEeeEccCCCCCc
Confidence 68999999999999999999999999999999999999996310 00 00000 00011111 256
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHh
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGN 587 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~ 587 (792)
.|.++++.+.+.. .+.++++||+.||++|++.||+|+++ ++.+..++.||+++..+++.++..++..+|.-+.+
T Consensus 323 pk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~ 399 (415)
T 3p96_A 323 GKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEA 399 (415)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHH
T ss_pred chHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHH
Confidence 6777776665542 15688999999999999999999999 88899999999999999999999999887765443
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-09 Score=106.62 Aligned_cols=130 Identities=19% Similarity=0.287 Sum_probs=90.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE-eChhhHH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR-LTPTQKL 515 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~-~~p~~K~ 515 (792)
.++.|+++++++.++++|+++.++||+....+....+.+|+... ...+....+ ... ...+... ..+..|.
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~-~~~~~~~~~~~~~K~ 145 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKD-------GKL-TGDVEGEVLKENAKG 145 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEET-------TEE-EEEEECSSCSTTHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEEC-------CEE-cCCcccCccCCccHH
Confidence 35678999999999999999999999999988888899988531 000000000 000 0000000 1234676
Q ss_pred HHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHH
Q 045750 516 RVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 516 ~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
+.+..+.+. + .+.++++||+.||++|++.||++++|+ +.+..+..||+++.++++..+..
T Consensus 146 ~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 146 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred HHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 665555442 2 156899999999999999999999998 67788899999998777776643
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.95 E-value=5.7e-09 Score=108.05 Aligned_cols=68 Identities=26% Similarity=0.354 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.+. + .+.++++||+.||++|++.|++|++|+++.+..++.||+++.+++.++|.++|++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 677777776654 1 1568999999999999999999999999999999999999999999999998864
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.3e-09 Score=99.08 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=88.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeCh--hhHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTP--TQKLR 516 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~ 516 (792)
..|++.+++++|+++|++++++||++...+..+.+++|+.. .|....| +--..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------~~~~~kp~~~~~~~ 91 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-------------------------IYTGSYKKLEIYEK 91 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE-------------------------EEECC--CHHHHHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh-------------------------hccCCCCCHHHHHH
Confidence 45788999999999999999999999999999999999863 2322222 22223
Q ss_pred HHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHH
Q 045750 517 VVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLV 575 (792)
Q Consensus 517 iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~ 575 (792)
+++.+.-.. +.++++||+.||++|.+.||+++++.++.+..++.||+++.+.+..++.
T Consensus 92 ~~~~~~~~~-~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 92 IKEKYSLKD-EEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHTTCCG-GGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHcCCCH-HHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 333333333 5788999999999999999999999888888999999999888877766
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.92 E-value=8.6e-09 Score=107.62 Aligned_cols=68 Identities=19% Similarity=0.160 Sum_probs=56.9
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEec-cCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILL-EKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~-~~~~~~i~~~i~~ 580 (792)
.|...++.+.+.- .+.++++||+.||++|++.|++|++|+++.+.+++.||+++. +++.++|.++|++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 4555555554431 146889999999999999999999999999999999999998 9999999998864
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.5e-09 Score=112.20 Aligned_cols=128 Identities=16% Similarity=0.199 Sum_probs=95.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE-----eChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR-----LTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~-----~~p~ 512 (792)
++.|++.+.++.|+++|++++++||.....+..+.+++|+.... ... +... ....-.+ ..++
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f--~~~-l~~~----------dg~~tg~i~~~~~~~k 245 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAF--SNT-VEIR----------DNVLTDNITLPIMNAA 245 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE--EEC-EEEE----------TTEEEEEECSSCCCHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEE--EEE-EEee----------CCeeeeeEecccCCCC
Confidence 48899999999999999999999999999999999999995310 000 0000 0000000 1235
Q ss_pred hHHHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 513 QKLRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 513 ~K~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.|.++++.+.+. + .+.++++||+.||++|.+.||+|+++ ++.+..++.+|.++..+++.++..+++
T Consensus 246 pkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 246 NKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 566665555432 1 15688999999999999999999999 688889999999998889998877654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.90 E-value=3.8e-09 Score=108.75 Aligned_cols=69 Identities=17% Similarity=0.129 Sum_probs=58.6
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 512 TQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 512 ~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
..|...++.+.++- .+.++++||+.||++|++.|++|++|+|+.+.+++.||+++.+++.++|.++|++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 36766666665541 1568999999999999999999999999999999999999998889999998864
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.89 E-value=3.8e-09 Score=106.40 Aligned_cols=135 Identities=16% Similarity=0.113 Sum_probs=94.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC-----CCccc-cchh------h--hccCH----------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR-----TTHVS-TGPD------L--ELLSQ---------- 493 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~-----~~~~~-~g~~------~--~~~~~---------- 493 (792)
.+.+.++++|++|+++| +++++|||+...+..+.+.+ .. ...+. .|+. + ..++.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 57899999999999999 99999999999999887765 31 00111 1111 0 00000
Q ss_pred ---------------------------H---HHHHhh---hcceE-----EEEeCh--hhHHHHHHHHhhcCCCEEEEEc
Q 045750 494 ---------------------------E---SFHERV---KRATV-----LARLTP--TQKLRVVQSLQSVGKHVVGFLG 533 (792)
Q Consensus 494 ---------------------------~---~~~~~~---~~~~v-----~~~~~p--~~K~~iv~~l~~~~~~~v~~iG 533 (792)
+ .+.+.+ ....+ +....| .+|...++.+.+.. . |+++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~-g-via~G 178 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGER-P-AIIAG 178 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTS-C-EEEEE
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhC-C-eEEEe
Confidence 0 001101 11112 122333 36888888888876 4 99999
Q ss_pred CCcccHHHHHhC--CeeEEecCCcHHHHhhcCEEecc-CCchHHHHHHHH
Q 045750 534 DGINDSLALDAA--NVGISVDSGASVAKDLADIILLE-KDLNVLVAGVER 580 (792)
Q Consensus 534 Dg~ND~~~l~~A--~vgia~~~~~~~~~~~ad~vl~~-~~~~~i~~~i~~ 580 (792)
|+.||.+||+.| ++||||+|+ ++.||+++.+ ++.++|.++|++
T Consensus 179 D~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 179 DDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp SSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 999999999999 999999998 6789999977 778888888864
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=3.8e-09 Score=102.10 Aligned_cols=108 Identities=16% Similarity=0.225 Sum_probs=85.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 445 QALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 445 ~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
.++++|+++|++++++||++...+..+++++|+.. +|.. ...|.+.++.+.+.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-------------------------~~~~--~kpk~~~~~~~~~~ 112 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-------------------------LYQG--QSNKLIAFSDLLEK 112 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-------------------------EECS--CSCSHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-------------------------eecC--CCCCHHHHHHHHHH
Confidence 48999999999999999999999999999999864 2222 23345555544433
Q ss_pred -C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHH-HHHH
Q 045750 525 -G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLV-AGVE 579 (792)
Q Consensus 525 -~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~-~~i~ 579 (792)
+ .+.++++||+.||++|++.||++++++++.+..++.||+++.+.+..++. ++++
T Consensus 113 ~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 113 LAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 2 15688999999999999999999999988888889999999887666655 5443
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.88 E-value=1e-08 Score=105.29 Aligned_cols=68 Identities=21% Similarity=0.304 Sum_probs=57.6
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.+.. .+.++++||+.||++|++.|++|++|+++.+..++.||+++.+++.++|.++|++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~ 260 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLER 260 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHHH
Confidence 5666666665531 1568899999999999999999999999999999999999998899999998853
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.85 E-value=3.6e-08 Score=102.36 Aligned_cols=68 Identities=22% Similarity=0.288 Sum_probs=56.6
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
+|...++.+.+.- .+.++++||+.||++|++.|++|++|+++.+..++.||+++.+++.++|.++|++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 3444455554431 1468999999999999999999999999999999999999999999999998864
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=2.4e-08 Score=100.81 Aligned_cols=68 Identities=15% Similarity=0.077 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhh-------cCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDL-------ADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~-------ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++. .+.++++||+.||.+|++.|++|++|+|+.+..++. ||+++.+++.++|.++|++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 5776666666542 156889999999999999999999999999999996 8899998899999998864
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.76 E-value=3.1e-08 Score=102.00 Aligned_cols=143 Identities=15% Similarity=0.096 Sum_probs=74.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--------Cccc-cc--h-----hh--hccCHHHHHHh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--------THVS-TG--P-----DL--ELLSQESFHER 499 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--------~~~~-~g--~-----~~--~~~~~~~~~~~ 499 (792)
.+.+.++++|++++++|++++++|||+...+..+.+++|++. ..+. .+ + .+ ..++.+...++
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i 105 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLV 105 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHH
Confidence 345678999999999999999999999999999999999853 1122 21 1 00 01111110000
Q ss_pred h--------------------------------------hcc--eEEE----------------------------EeCh
Q 045750 500 V--------------------------------------KRA--TVLA----------------------------RLTP 511 (792)
Q Consensus 500 ~--------------------------------------~~~--~v~~----------------------------~~~p 511 (792)
+ ... .++. +..|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~ 185 (275)
T 1xvi_A 106 LNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLD 185 (275)
T ss_dssp HHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEE
T ss_pred HHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEec
Confidence 0 000 0111 1111
Q ss_pred --hhHHHHHHHHhhcC----CCE--EEEEcCCcccHHHHHhCCeeEEecCCc---HHHHhh--cC-EEeccCCchHHHHH
Q 045750 512 --TQKLRVVQSLQSVG----KHV--VGFLGDGINDSLALDAANVGISVDSGA---SVAKDL--AD-IILLEKDLNVLVAG 577 (792)
Q Consensus 512 --~~K~~iv~~l~~~~----~~~--v~~iGDg~ND~~~l~~A~vgia~~~~~---~~~~~~--ad-~vl~~~~~~~i~~~ 577 (792)
..|...++.+.+.. .+. ++++||+.||.+|++.|++||+|+|+. +..++. || +++.+++.++|.++
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC----------------------------
T ss_pred CCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHH
Confidence 24555554444321 145 899999999999999999999999987 566653 78 89988899999988
Q ss_pred HHH
Q 045750 578 VER 580 (792)
Q Consensus 578 i~~ 580 (792)
|++
T Consensus 266 l~~ 268 (275)
T 1xvi_A 266 LDH 268 (275)
T ss_dssp ---
T ss_pred HHH
Confidence 864
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.76 E-value=6.4e-09 Score=101.27 Aligned_cols=119 Identities=23% Similarity=0.261 Sum_probs=89.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
+++|++.+.++.|++.|++++++|+.....+..+ +.+|+... ...+...+ . ..--....|..|...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~----~~~~~~~~-~--------~~~~~~~~~~~k~~~ 144 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM----ANRAIFED-G--------KFQGIRLRFRDKGEF 144 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE----EEEEEEET-T--------EEEEEECCSSCHHHH
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh----eeeEEeeC-C--------ceECCcCCccCHHHH
Confidence 7899999999999999999999999998888888 88887421 00000000 0 000034456788888
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
++.+ .. +.++++||+.||++|++.||++++|+++.+ .||+++ +++..+.+.++
T Consensus 145 l~~l--~~-~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~--~~~~el~~~l~ 197 (201)
T 4ap9_A 145 LKRF--RD-GFILAMGDGYADAKMFERADMGIAVGREIP----GADLLV--KDLKELVDFIK 197 (201)
T ss_dssp HGGG--TT-SCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEE--SSHHHHHHHHH
T ss_pred HHhc--Cc-CcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEE--ccHHHHHHHHH
Confidence 8888 33 678899999999999999999999998776 899998 45666766664
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2.3e-08 Score=102.06 Aligned_cols=66 Identities=23% Similarity=0.223 Sum_probs=56.7
Q ss_pred hhHHHHHHHHhhcCC-----CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 512 TQKLRVVQSLQSVGK-----HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~-----~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
..|...++.+.++-+ +.++++||+.||.+|++.|++|++|+|+.+ + .+++++.+++.+++.+++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 578888888776532 568999999999999999999999999988 4 78899999999999888864
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.72 E-value=1.9e-08 Score=100.89 Aligned_cols=126 Identities=22% Similarity=0.246 Sum_probs=93.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|++++++|+.....+..+.+++|+.. +.++.+..... ..-.|+--.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 167 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVER----------------GKPHPDMAL 167 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCC----------------CCCCHHHHH
Confidence 467899999999999999999999999999999999999853 22222222110 011233344
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe---eEEecCC-cHHHHh-hcCEEeccCCchHHHHHHHHhH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANV---GISVDSG-ASVAKD-LADIILLEKDLNVLVAGVERGR 582 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v---gia~~~~-~~~~~~-~ad~vl~~~~~~~i~~~i~~gR 582 (792)
.+.+.+.-.. +.++++||+.||+.|.+.||+ +|+++++ .+..++ .+|+++ +++..+.+.++.++
T Consensus 168 ~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 168 HVARGLGIPP-ERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHTCCG-GGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHcCCCH-HHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 5555555445 678999999999999999999 8888844 355555 799998 67888988887654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.72 E-value=2.2e-08 Score=102.28 Aligned_cols=68 Identities=21% Similarity=0.249 Sum_probs=56.5
Q ss_pred hHHHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++ + .+.++++||+.||++|++.|++|++|+++.+..++.||+++.+++.+++.+++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 566555555443 1 1568899999999999999999999999999999999999988888889988864
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=1.7e-08 Score=98.82 Aligned_cols=125 Identities=18% Similarity=0.164 Sum_probs=94.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC----CccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT----THVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
++.|++.+.++.|++.|++++++|+.....+....+.+|+.. ..+++++. .. ..-.|+-
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~----------------~kp~~~~ 132 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-AP----------------PKPHPGG 132 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SC----------------CTTSSHH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CC----------------CCCCHHH
Confidence 346899999999999999999999999999999999999842 11222111 00 0011222
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhH
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGASVAKDLADIILLEKDLNVLVAGVERGR 582 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR 582 (792)
-..+.+.+.-.. +.++++||+.||+.|.+.||+ +|+|+++.+..++.||+++ +++..+...++..|
T Consensus 133 ~~~~~~~~g~~~-~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~~ 199 (205)
T 3m9l_A 133 LLKLAEAWDVSP-SRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHHHTTCCG-GGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCH-HHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhcc
Confidence 334444444334 678899999999999999999 9999988888888999998 67888888887655
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.71 E-value=2.3e-08 Score=101.41 Aligned_cols=57 Identities=21% Similarity=0.190 Sum_probs=48.0
Q ss_pred hhHHHHHHHHhhc----CCCEEEEEcCCcccHHHHHhCCeeEEecCCc-HHHHhhcCEEecc
Q 045750 512 TQKLRVVQSLQSV----GKHVVGFLGDGINDSLALDAANVGISVDSGA-SVAKDLADIILLE 568 (792)
Q Consensus 512 ~~K~~iv~~l~~~----~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~-~~~~~~ad~vl~~ 568 (792)
..|...++.+.+. +.+.|+++||+.||++|++.|++|+||+|+. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4688877777664 4478999999999999999999999999988 7788889887644
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.70 E-value=6.5e-08 Score=95.31 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=88.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
.+.|++.+.++.|+++|++++++|+.....+..+.+.+|+.....+...-... .+.. . ........+|..+.+.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~-~~~~~~~~~~~~~~~~ 155 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWN-SDGS----F-KELDNSNGACDSKLSA 155 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEEC-TTSB----E-EEEECTTSTTTCHHHH
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeec-CCCc----e-eccCCCCCCcccHHHH
Confidence 37899999999999999999999999999999999999996422111000000 0000 0 0000011234556666
Q ss_pred HHHH-hhcCCCEEEEEcCCcccHHHHHh----CCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 518 VQSL-QSVGKHVVGFLGDGINDSLALDA----ANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 518 v~~l-~~~~~~~v~~iGDg~ND~~~l~~----A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
+... .-.. +.++++||+.||++|+++ +.++++++++.+..+..+|+++ +++..+.+.+
T Consensus 156 l~~~~~~~~-~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 156 FDKAKGLID-GEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp HHHHGGGCC-SEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred HHHHhCCCC-CCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 6555 3344 889999999999999976 3445555677788899999998 5566665543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.3e-07 Score=92.70 Aligned_cols=126 Identities=15% Similarity=0.104 Sum_probs=94.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC---ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.+.++.|++. ++++++|+.....+..+.+++|+... .+..+.+... ...-.-.|+.|
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~-------------~~~~~p~p~~~ 134 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-------------VGYQLRQKDPK 134 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCE-------------EEEECCSSSHH
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceE-------------EeeecCCCchH
Confidence 6789999999999999 99999999999999999999998641 1111111100 00001467889
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
...++.+...+ ..++++||+.||++|.+.||+++++. +.+..++.++.++.-+++..+.+.++
T Consensus 135 ~~~l~~l~~~~-~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 135 RQSVIAFKSLY-YRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHTT-CEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred HHHHHHHHhcC-CEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhccccchHHHHHHHH
Confidence 99999998877 88999999999999999999999985 44555554443322367888877764
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.58 E-value=1.1e-07 Score=94.42 Aligned_cols=127 Identities=14% Similarity=0.093 Sum_probs=89.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
-++.|++.+.++.|++.|+++.++|+.....+....+++|+.. +.++.+..... ..-.|+--
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~ 148 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGK----------------LSTKEDVI 148 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSS----------------SCSHHHHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCC----------------CCCCHHHH
Confidence 3578999999999999999999999999999999999999853 11111111100 00012222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe---eEEecCCcHHH--HhhcCEEeccCCchHHHHHHHHhH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV---GISVDSGASVA--KDLADIILLEKDLNVLVAGVERGR 582 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v---gia~~~~~~~~--~~~ad~vl~~~~~~~i~~~i~~gR 582 (792)
..+.+.+.-.. +.++++||+.||+.|.+.||+ ++++|++.... +..+|+++ +++..+.+.+...+
T Consensus 149 ~~~~~~lgi~~-~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~~~ 218 (226)
T 3mc1_A 149 RYAMESLNIKS-DDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILELR 218 (226)
T ss_dssp HHHHHHHTCCG-GGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHTC-
T ss_pred HHHHHHhCcCc-ccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHHHh
Confidence 33444444334 578999999999999999999 77778654433 57899998 57888888876443
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.55 E-value=2e-07 Score=93.07 Aligned_cols=122 Identities=16% Similarity=0.053 Sum_probs=81.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+... +..+.+++|+.. +.++.+.+.. ...-.|+--.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 153 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLA----------------KGKPDPDIFL 153 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC-------------------------CCHHH
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCC----------------CCCCChHHHH
Confidence 3689999999999999999999999854 777888999853 2222222110 1122233445
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.+.+.+.-.. +.++++||+.||+.|.+.||+++++.++.+..+ .||+++.+.+.-.+..+++
T Consensus 154 ~~~~~lgi~~-~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 154 TAAAMLDVSP-ADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp HHHHHHTSCG-GGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHHH
T ss_pred HHHHHcCCCH-HHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHHH
Confidence 5666666555 678899999999999999999999998777776 8999996655444445544
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.53 E-value=7.4e-08 Score=95.20 Aligned_cols=121 Identities=9% Similarity=-0.034 Sum_probs=84.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.+++.|+++.++|++ ..+....+++|+.. +.++.+..... ..-.|+--.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 152 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAA----------------SKPAPDIFI 152 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSS----------------CTTSSHHHH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCC----------------CCCChHHHH
Confidence 45789999999999999999999998 44566777888742 12222221110 001122333
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+.+.+.-.. +.++++||+.||++|++.||++++|.++.+..+ .||+++.+.+..++..++
T Consensus 153 ~~~~~lgi~~-~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 153 AAAHAVGVAP-SESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp HHHHHTTCCG-GGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred HHHHHcCCCh-hHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHHH
Confidence 4444444344 678899999999999999999999998888887 899998765555555444
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.53 E-value=1.6e-07 Score=92.94 Aligned_cols=120 Identities=20% Similarity=0.211 Sum_probs=85.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.+++.|++++++|+..........+++|+.. ..++.+..... ..-.|+-..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~kp~~~~~~ 157 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY----------------SKPHPQVYL 157 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC----------------CTTSTHHHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCC----------------CCCChHHHH
Confidence 457899999999999999999999999998888889988752 11111111000 001133334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe----cCCcHHHHhhcCEEeccCCchHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV----DSGASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~----~~~~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
.+.+.+.-.. +.++++||+.||++|++.||+++++ +++.+..+..||+++. ++..+..
T Consensus 158 ~~~~~~~i~~-~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 158 DCAAKLGVDP-LTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp HHHHHHTSCG-GGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCCH
T ss_pred HHHHHcCCCH-HHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHhH
Confidence 4555554444 6788999999999999999999999 5666667889999984 4544433
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.5e-07 Score=97.65 Aligned_cols=133 Identities=18% Similarity=0.174 Sum_probs=92.6
Q ss_pred CCChhHHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHhCCCCCccccchhhhccCHHH
Q 045750 438 PPKDSAKQALWRLAKK-GVKAKLLTGD---------------------SLSLAIKICHEVGIRTTHVSTGPDLELLSQES 495 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~-Gi~v~~~Tgd---------------------~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~ 495 (792)
.+++++.+.++.+++. |+++.+.|.. ....+..+.++.|+.............
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~----- 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGD----- 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTC-----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccC-----
Confidence 4678999999999998 9999998876 344445555555553211110000000
Q ss_pred HHHhhhcceEEEEeCh--hhHHHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCC
Q 045750 496 FHERVKRATVLARLTP--TQKLRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD 570 (792)
Q Consensus 496 ~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~ 570 (792)
.....+....| ..|...++.+.+. | .+.++++||+.||++|++.|++|++|+++.+..++.||+++.+++
T Consensus 197 -----~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 197 -----PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLITDSEY 271 (289)
T ss_dssp -----CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCBCSSCH
T ss_pred -----CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEEcCCCC
Confidence 00012333333 4576666666553 2 156899999999999999999999999999999999999999888
Q ss_pred chHHHHHHHH
Q 045750 571 LNVLVAGVER 580 (792)
Q Consensus 571 ~~~i~~~i~~ 580 (792)
.+++.+++++
T Consensus 272 ~~gv~~~~~~ 281 (289)
T 3gyg_A 272 SKGITNTLKK 281 (289)
T ss_dssp HHHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 8899888864
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.49 E-value=8e-07 Score=88.65 Aligned_cols=104 Identities=17% Similarity=0.135 Sum_probs=74.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE-----eChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR-----LTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~-----~~p~ 512 (792)
.+.|++.+.++.|+++|++++++||.....+..+++++|++. ++... +...+ .....+ ..+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~--~~~~~-~~~~~----------~~~~g~~~~~~~~~~ 158 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH--LIATD-PEYRD----------GRYTGRIEGTPSFRE 158 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE--EEECE-EEEET----------TEEEEEEESSCSSTH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE--EEEcc-eEEEC----------CEEeeeecCCCCcch
Confidence 479999999999999999999999999999999999999962 11100 00000 001111 1235
Q ss_pred hHHHHHHHHhhc-C-----CCEEEEEcCCcccHHHHHhCCeeEEecCC
Q 045750 513 QKLRVVQSLQSV-G-----KHVVGFLGDGINDSLALDAANVGISVDSG 554 (792)
Q Consensus 513 ~K~~iv~~l~~~-~-----~~~v~~iGDg~ND~~~l~~A~vgia~~~~ 554 (792)
.|.+.++.+.+. + .+.++++||+.||++|++.||+++++...
T Consensus 159 ~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 159 GKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp HHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred HHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 676666554432 2 26899999999999999999999999533
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.1e-07 Score=94.72 Aligned_cols=125 Identities=17% Similarity=0.121 Sum_probs=89.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.+++.|++++++|+.....+....+.+|+.. +.++.+..... ..-.|+--.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 154 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSY----------------GKPDPDLFL 154 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSC----------------CTTSTHHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCC----------------CCCChHHHH
Confidence 457899999999999999999999999999999999999864 22333322110 001122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe---eEEec-CCcHHHHhh-cCEEeccCCchHHHHHHHHh
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANV---GISVD-SGASVAKDL-ADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v---gia~~-~~~~~~~~~-ad~vl~~~~~~~i~~~i~~g 581 (792)
.+.+.+.-.. +.++++||+.||+.|.+.||+ +++++ +..+..++. +|+++ +++..+.+.++..
T Consensus 155 ~~~~~l~~~~-~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 155 AAAKKIGAPI-DECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp HHHHHTTCCG-GGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred HHHHHhCCCH-HHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 3444443333 678999999999999999999 55556 555666665 99998 6788888887554
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.45 E-value=3.1e-07 Score=91.26 Aligned_cols=130 Identities=18% Similarity=0.166 Sum_probs=88.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeC------
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT------ 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~------ 510 (792)
-++.|++.++++.|+++|++++++|+.+...+..+.+++|+.....++..-... ....+.+.-.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~----------~~~~~~~~~~~~~~~~ 154 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY----------FNGEYAGFDETQPTAE 154 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC----------TTSCEEEECTTSGGGS
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEc----------CCCcEecCCCCCcccC
Confidence 367899999999999999999999999999999999999996321111100000 0000112111
Q ss_pred hhhHHHHHHHHhhc-CCCEEEEEcCCcccHHHHHhCCeeEEecCC--cHHHHhhcCEEeccCCchHHHHHH
Q 045750 511 PTQKLRVVQSLQSV-GKHVVGFLGDGINDSLALDAANVGISVDSG--ASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 511 p~~K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~A~vgia~~~~--~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
+..|.++++.+.+. +-+.++++||+.||+.+.++||++|+++.. .+.....+|+++ +++..+.+.+
T Consensus 155 ~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 155 SGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp TTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred CCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 23577776665543 325688999999999999999999888743 345556789988 4566654443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.44 E-value=4.2e-07 Score=92.85 Aligned_cols=126 Identities=18% Similarity=0.197 Sum_probs=86.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.+.|++.+.++.+++.|+++.++|+........+.+.+|+.. +.++.+..... ..-.|+--
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------~kp~~~~~ 166 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA----------------GRPYPWMC 166 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC----------------CTTSSHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCC----------------CCCCHHHH
Confidence 467899999999999999999999999998888888887642 22333322110 00123333
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCC---eeEEecCC------------------------cHHHHhh-cCEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAAN---VGISVDSG------------------------ASVAKDL-ADIIL 566 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~---vgia~~~~------------------------~~~~~~~-ad~vl 566 (792)
..+.+.+.-...+.++++||+.||+.|++.|| ++++++++ .+..++. ||+++
T Consensus 167 ~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~ 246 (267)
T 1swv_A 167 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI 246 (267)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceec
Confidence 44555544322146889999999999999999 56666654 3444444 99998
Q ss_pred ccCCchHHHHHHHHh
Q 045750 567 LEKDLNVLVAGVERG 581 (792)
Q Consensus 567 ~~~~~~~i~~~i~~g 581 (792)
+++..+...+...
T Consensus 247 --~~~~el~~~l~~~ 259 (267)
T 1swv_A 247 --ETMQELESVMEHI 259 (267)
T ss_dssp --SSGGGHHHHHHHH
T ss_pred --cCHHHHHHHHHHH
Confidence 5688887777543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.43 E-value=2e-07 Score=92.26 Aligned_cols=121 Identities=17% Similarity=0.162 Sum_probs=81.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLR 516 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 516 (792)
+.|++.+.++.+++.|+++.++|+..........+++|+... .++.+..... ..-.|+-...
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~k~~~~~~~~ 153 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTH----------------HKPDPEGLLL 153 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSS----------------CTTSTHHHHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCC----------------CCCChHHHHH
Confidence 368999999999999999999999999998888888887531 2222211100 0001122233
Q ss_pred HHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe----cCCcHHHHhh-cCEEeccCCchHHHHHH
Q 045750 517 VVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV----DSGASVAKDL-ADIILLEKDLNVLVAGV 578 (792)
Q Consensus 517 iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~----~~~~~~~~~~-ad~vl~~~~~~~i~~~i 578 (792)
+.+.+.-.. +.++++||+.||++|++.||+++++ +++.+..++. ||+++ +++..+.+.+
T Consensus 154 ~~~~~~~~~-~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 217 (225)
T 3d6j_A 154 AIDRLKACP-EEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRII--STLGQLISVP 217 (225)
T ss_dssp HHHHTTCCG-GGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEE--SSGGGGC---
T ss_pred HHHHhCCCh-HHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEE--CCHHHHHHhh
Confidence 444443333 5688999999999999999998887 4555555555 89998 4455555555
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.41 E-value=2.2e-07 Score=92.65 Aligned_cols=125 Identities=11% Similarity=0.058 Sum_probs=92.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.. +.++.+.+... ..-.|+--.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 162 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRL----------------YKTAPAAYA 162 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTC----------------CTTSHHHHT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCC----------------CCcCHHHHH
Confidence 467899999999999999999999999999999999999853 22222221110 001122334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe----cCCcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV----DSGASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~----~~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
.+.+.+.-.. +.++++||+.||+.|.+.||+++++ +++.+..+..+|+++ +++..+.+.+...
T Consensus 163 ~~~~~~~~~~-~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~~ 229 (233)
T 3umb_A 163 LAPRAFGVPA-AQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQAR 229 (233)
T ss_dssp HHHHHHTSCG-GGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC-
T ss_pred HHHHHhCCCc-ccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHHh
Confidence 4555555444 6788999999999999999999999 666666777899998 6788888887643
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.39 E-value=3.7e-07 Score=90.75 Aligned_cols=123 Identities=16% Similarity=0.165 Sum_probs=89.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
-++.|++.+.++.+++.|+++.++|+........+.+++|+.. +.++.+.+... ..-.|+--
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~ 158 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRL----------------FKPHQKVY 158 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTC----------------CTTCHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhccc----------------CCCChHHH
Confidence 3578999999999999999999999999999999999999853 22222221110 00112233
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe----cCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV----DSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~----~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
..+.+.+.-.. +.++++||+.||+.|.+.||+++++ +++.+..+..+|+++ +++..+.+.+
T Consensus 159 ~~~~~~~~~~~-~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 159 ELAMDTLHLGE-SEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHTCCG-GGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHhCCCc-ccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 34445554444 6788999999999999999999998 455566677899998 5677766554
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.36 E-value=7.2e-07 Score=88.84 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=84.6
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDS---LSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~---~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
+.|++.+.++.+++.|+++.++|+.. ........+.+|+.. +.++.+.+.... .-.|+-
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------kp~~~~ 163 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSY----------------KPRKEM 163 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCC----------------TTCHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCC----------------CCCHHH
Confidence 47999999999999999999999999 888888889998853 122222211100 001222
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCeeEEe---cCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVGISV---DSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vgia~---~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
-..+.+.+.-.. +.++++||+. ||+.|.+.||+++++ +++.+..+..+|+++ +++..+.+.++
T Consensus 164 ~~~~~~~lgi~~-~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 164 FEKVLNSFEVKP-EESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHTTCCG-GGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHcCCCc-cceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 233334433333 6789999999 999999999999998 444444455678877 56777777664
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-06 Score=87.24 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=89.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
.+.|++.+.++.+++. +++.++|+..........+.+|+.. +.++.+.+... ..-.|+--.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~----------------~kp~~~~~~ 162 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGF----------------FKPHPRIFE 162 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTB----------------CTTSHHHHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCC----------------CCcCHHHHH
Confidence 5679999999999999 9999999999999999999999853 22222221110 001122234
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCC---eeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAAN---VGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~---vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.+.+.+.-.. +.++++||+. ||+.|.+.|| ++++++++.+..++.+|+++ +++..+.+.++
T Consensus 163 ~~~~~~~~~~-~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 163 LALKKAGVKG-EEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHTCCG-GGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHcCCCc-hhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 4555554444 6789999997 9999999999 57777877777888999998 56888877774
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.36 E-value=6.6e-07 Score=89.76 Aligned_cols=123 Identities=14% Similarity=0.063 Sum_probs=84.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.++.+..... ..-.|+--
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~ 172 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGT----------------RVNKNEVI 172 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSC----------------CCCHHHHH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCC----------------CCCCHHHH
Confidence 3468999999999999999999999999999999999999853 11111111100 00011222
Q ss_pred HHHHHHHhhc-CCCEEEEEcCCcccHHHHHhCCe---eEEecCCcHHH--HhhcCEEeccCCchHHHHHH
Q 045750 515 LRVVQSLQSV-GKHVVGFLGDGINDSLALDAANV---GISVDSGASVA--KDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 515 ~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~A~v---gia~~~~~~~~--~~~ad~vl~~~~~~~i~~~i 578 (792)
..+.+.+.-. . +.++++||+.||+.|.+.||+ ++++|++.... +..+|+++ +++..+.+.|
T Consensus 173 ~~~~~~~g~~~~-~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l 239 (240)
T 3sd7_A 173 QYVLDLCNVKDK-DKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIV--ENVESIKDIL 239 (240)
T ss_dssp HHHHHHHTCCCG-GGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEE--SSSTTHHHHH
T ss_pred HHHHHHcCCCCC-CcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEE--CCHHHHHHHh
Confidence 3334444433 4 678999999999999999999 66666544333 57899998 4566666554
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.34 E-value=7.1e-07 Score=85.16 Aligned_cols=121 Identities=15% Similarity=0.105 Sum_probs=81.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhC--CCCCcccc-----chhhhccCHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSL---------------SLAIKICHEVG--IRTTHVST-----GPDLELLSQES 495 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~---------------~~a~~ia~~~g--i~~~~~~~-----g~~~~~~~~~~ 495 (792)
++.|++.+++++|+++|+++.++|+.+. ..+....+++| ++. ++. +.+...
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~~~~----- 99 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA--IFMCPHGPDDGCAC----- 99 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE--EEEECCCTTSCCSS-----
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE--EEEcCCCCCCCCCC-----
Confidence 5789999999999999999999999986 56667777888 432 110 000000
Q ss_pred HHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe---eEEecCCcHHHH----hhcCEEecc
Q 045750 496 FHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV---GISVDSGASVAK----DLADIILLE 568 (792)
Q Consensus 496 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v---gia~~~~~~~~~----~~ad~vl~~ 568 (792)
..-.|+--..+.+.+.-.. +.+++|||+.||+.|.++||+ +++.|++..... ..+|+++
T Consensus 100 -----------~KP~~~~~~~~~~~~~~~~-~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~-- 165 (179)
T 3l8h_A 100 -----------RKPLPGMYRDIARRYDVDL-AGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC-- 165 (179)
T ss_dssp -----------STTSSHHHHHHHHHHTCCC-TTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--
T ss_pred -----------CCCCHHHHHHHHHHcCCCH-HHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--
Confidence 0001222234555555444 678899999999999999996 555555444443 4579988
Q ss_pred CCchHHHHHHH
Q 045750 569 KDLNVLVAGVE 579 (792)
Q Consensus 569 ~~~~~i~~~i~ 579 (792)
+++..+.+.+.
T Consensus 166 ~~l~el~~~l~ 176 (179)
T 3l8h_A 166 EDLAAVAEQLL 176 (179)
T ss_dssp SSHHHHHHHHH
T ss_pred cCHHHHHHHHH
Confidence 66888777664
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.34 E-value=4.6e-07 Score=88.10 Aligned_cols=117 Identities=12% Similarity=0.111 Sum_probs=82.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
.+.|++.+.++.+++.|++++++|+....... ..+.+|+... .++.+.+... ..-.|+--.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 147 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFV----------------RKPSPEAAT 147 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCC----------------CTTSSHHHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCC----------------CCCCcHHHH
Confidence 45799999999999999999999999988888 8888887431 1111111100 001123334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+.+.++-.. +.++++||+.||++|++.||++ ++|+++. . .+|+++ +++..+.+.+
T Consensus 148 ~~~~~~~i~~-~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 148 YLLDKYQLNS-DNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHTCCG-GGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred HHHHHhCCCc-ccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 5555555444 6788999999999999999997 8888776 3 688887 4566665544
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.32 E-value=6e-07 Score=90.44 Aligned_cols=120 Identities=18% Similarity=0.246 Sum_probs=84.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++.|++.+.++.|++.|++++++|+.....+..+.+++|+.. +.++.+...... .-.|+-.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~----------------Kp~~~~~ 176 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEI----------------KPHPAPF 176 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSC----------------TTSSHHH
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCC----------------CcCHHHH
Confidence 3567899999999999999999999999999999999999853 222222221110 0123344
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEE-ecC----CcHHHHhhcCEEeccCCchHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGIS-VDS----GASVAKDLADIILLEKDLNVLV 575 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia-~~~----~~~~~~~~ad~vl~~~~~~~i~ 575 (792)
..+.+.+.-.. +.++++||+.||++|.+.||++++ +.. +.+..+..+|+++ +++..+.
T Consensus 177 ~~~~~~~~~~~-~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi--~~~~el~ 239 (243)
T 2hsz_A 177 YYLCGKFGLYP-KQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADIL 239 (243)
T ss_dssp HHHHHHHTCCG-GGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGG
T ss_pred HHHHHHhCcCh-hhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEE--CCHHHHH
Confidence 45556555444 678899999999999999999844 432 2344567799988 4555543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.31 E-value=5.7e-07 Score=88.02 Aligned_cols=119 Identities=14% Similarity=0.117 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.+++.|++++++|+.....+....+++|+.. +.++.+.+... ..-.|+--.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 152 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKE----------------SKPNPEIYL 152 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSS----------------CTTSSHHHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccC----------------CCCChHHHH
Confidence 467899999999999999999999999999999999999853 22222221110 001233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCC--cHHHHhhcCEEeccCCchHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSG--ASVAKDLADIILLEKDLNVLV 575 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~--~~~~~~~ad~vl~~~~~~~i~ 575 (792)
.+.+.+.-.. +.++++||+.||+.|.+.||+++++.+. ....+..+|+++ +++..+.
T Consensus 153 ~~~~~~~~~~-~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~--~~~~el~ 211 (214)
T 3e58_A 153 TALKQLNVQA-SRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLL--DSLTDVL 211 (214)
T ss_dssp HHHHHHTCCG-GGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEE--SSGGGGG
T ss_pred HHHHHcCCCh-HHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHH--HHHHHHH
Confidence 5555555444 6788999999999999999998887532 344457789988 4455443
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.29 E-value=8.5e-07 Score=87.95 Aligned_cols=125 Identities=18% Similarity=0.133 Sum_probs=88.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
-++.|++.++++.|++.|+++.++|+.....+..+.+++|+.. +.++.+.+... .+-.|+-.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~Kp~~~~~ 145 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE----------------KKPSPTPV 145 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCT----------------TCCTTHHH
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCC----------------CCCChHHH
Confidence 3568999999999999999999999999999999999999852 22222221110 11124444
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecC--CcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDS--GASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~--~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
..+.+.+.-.. +.++++||+.||+.|.+.||++ |++.. +.... ..+|+++ +++..+...+...
T Consensus 146 ~~~~~~~~~~~-~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~~~ 211 (222)
T 2nyv_A 146 LKTLEILGEEP-EKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMDNH 211 (222)
T ss_dssp HHHHHHHTCCG-GGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHHTT
T ss_pred HHHHHHhCCCc-hhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHHHh
Confidence 55555555444 6788999999999999999998 66653 22222 6688887 5688887777543
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-06 Score=86.82 Aligned_cols=120 Identities=15% Similarity=0.103 Sum_probs=82.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.. +.++.+.+... ..-.|+--.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~Kp~~~~~~ 166 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGT----------------IKPSPEPVL 166 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSC----------------CTTSSHHHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCC----------------CCCChHHHH
Confidence 468999999999999999999999999999999999999853 11111111100 001122334
Q ss_pred HHHHHHhhcCCC-EEEEEcCCcccHHHHHhCCe-eEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVGKH-VVGFLGDGINDSLALDAANV-GISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~~~-~v~~iGDg~ND~~~l~~A~v-gia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.+.+.+.-.. + .++++||+.||+.|.++||+ +|.++++.+ ..+|+++ +++..+.+.+.
T Consensus 167 ~~~~~lgi~~-~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 167 AALTNINIEP-SKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHTCCC-STTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHcCCCc-ccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 5555555444 5 78899999999999999997 777776544 3567776 56877777664
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.6e-06 Score=87.19 Aligned_cols=124 Identities=14% Similarity=0.144 Sum_probs=82.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC----CccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT----THVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
.++.|++.+.++.|++.|+++.++|+..........+. |+.. +.++++.+... ..-.|+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~----------------~kp~~~ 169 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKY----------------GKPNPE 169 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSS----------------CTTSSH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCC----------------CCCCCH
Confidence 35679999999999999999999999998887777777 8753 22333332211 111233
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCCc--H--HHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSGA--S--VAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~--~--~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
--..+.+.+.-.. +.++++||+.||+.|.+.||++ +++.++. . ..+..+|+++ +++..+.+.++.
T Consensus 170 ~~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 239 (247)
T 3dv9_A 170 PYLMALKKGGFKP-NEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWET 239 (247)
T ss_dssp HHHHHHHHHTCCG-GGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCh-hheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHHH
Confidence 3445555555444 6788999999999999999975 4454332 2 1234799998 567777776643
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.3e-06 Score=88.72 Aligned_cols=126 Identities=14% Similarity=0.039 Sum_probs=88.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--Cc-cccchhhh-ccCHHHHHHhhhcceEEEEeChhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--TH-VSTGPDLE-LLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~-~~~g~~~~-~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
++.|++.+.++.|++.|++++++|+.....+....+.+|+.. +. ++.+++.. . ..-.|+-
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~----------------~Kp~~~~ 173 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGR----------------GKPHPDL 173 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTC----------------CTTSSHH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcC----------------CCCChHH
Confidence 457899999999999999999999999999999999999842 12 33332221 1 0111222
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCC-------cHHH-HhhcCEEeccCCchHHHHHHHHhH
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSG-------ASVA-KDLADIILLEKDLNVLVAGVERGR 582 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~-------~~~~-~~~ad~vl~~~~~~~i~~~i~~gR 582 (792)
-..+.+.+.-.. +.++++||+.||+.|.+.||++ +.+.++ .+.. +..+|+++ +++..+.+.++...
T Consensus 174 ~~~~~~~lgi~~-~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~~~ 248 (259)
T 4eek_A 174 YTFAAQQLGILP-ERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAEAG 248 (259)
T ss_dssp HHHHHHHTTCCG-GGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCH-HHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHhcc
Confidence 234444444344 6789999999999999999998 555433 2233 34589998 67888888886543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.3e-06 Score=87.82 Aligned_cols=122 Identities=14% Similarity=0.142 Sum_probs=83.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC----CccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT----THVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
++.|++.+.++.|++.|+++.++|+.....+....+. |+.. +.++++.+... ..-.|+-
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~----------------~kp~~~~ 171 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY----------------GKPNPEP 171 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS----------------CTTSSHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC----------------CCCChHH
Confidence 5679999999999999999999999988777777776 7753 22333332211 0112233
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCcHH----HHhhcCEEeccCCchHHHHHHH
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGASV----AKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~~~----~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
-..+.+.+.-.. +.++++||+.||+.|.+.||+ ++++.++... .+..+|+++ +++..+.+.++
T Consensus 172 ~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 172 YLMALKKGGLKA-DEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHTTCCG-GGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHcCCCH-HHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 334444444344 678899999999999999999 4555543322 234699998 67888777664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.26 E-value=2.6e-06 Score=84.77 Aligned_cols=119 Identities=12% Similarity=0.014 Sum_probs=79.6
Q ss_pred CCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKK-GVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~-Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.+.|++.+.++.+++. |+++.++|+.....+....+.+|+... .+..+.+... .+..+
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-------------------~~k~~ 153 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD-------------------RNELP 153 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS-------------------GGGHH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcC-------------------ccchH
Confidence 3579999999999999 999999999999999999999998542 1222221100 11122
Q ss_pred H----HHHHHHh--hcCCCEEEEEcCCcccHHHHHhCCee---EEecCCcHHHH-h-hcCEEeccCCchHHHHHH
Q 045750 515 L----RVVQSLQ--SVGKHVVGFLGDGINDSLALDAANVG---ISVDSGASVAK-D-LADIILLEKDLNVLVAGV 578 (792)
Q Consensus 515 ~----~iv~~l~--~~~~~~v~~iGDg~ND~~~l~~A~vg---ia~~~~~~~~~-~-~ad~vl~~~~~~~i~~~i 578 (792)
. .+.+.+. -.. +.++++||+.||+.|.+.||++ ++.+++..... . .+|+++. ++..+...+
T Consensus 154 ~~~~~~~~~~lg~~~~~-~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l 225 (234)
T 2hcf_A 154 HIALERARRMTGANYSP-SQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHCCCCCG-GGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCc-ccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHH
Confidence 2 2334443 233 6788999999999999999954 44454443333 2 2899884 455555555
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.23 E-value=8.5e-07 Score=94.96 Aligned_cols=110 Identities=13% Similarity=0.124 Sum_probs=76.4
Q ss_pred ecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC----CCccccchhhhccCHHHHHHhhhcceEEE
Q 045750 432 LITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR----TTHVSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 432 ~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~----~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
...-...++|++++.|+.||++|++|+|+||.....++.+|+++|+. .+.++ |..+....+ -.+-.
T Consensus 215 ~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~d---------G~~tg 284 (385)
T 4gxt_A 215 KYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDE---------GKILP 284 (385)
T ss_dssp EEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTT---------CCEEE
T ss_pred eeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecC---------Cceee
Confidence 33344568999999999999999999999999999999999999863 23333 222211110 01222
Q ss_pred E-------eChhhHHHHHHHHhhc--CCCEEEEEcCCcccHHHHHh-CCeeEEe
Q 045750 508 R-------LTPTQKLRVVQSLQSV--GKHVVGFLGDGINDSLALDA-ANVGISV 551 (792)
Q Consensus 508 ~-------~~p~~K~~iv~~l~~~--~~~~v~~iGDg~ND~~~l~~-A~vgia~ 551 (792)
+ +..+.|.+.++.+... +...++++|||.||.+||++ +|.++++
T Consensus 285 ~~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 285 KFDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp EECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred eecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2 2356799888876432 32457899999999999986 4554444
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.23 E-value=9.9e-07 Score=87.89 Aligned_cols=122 Identities=14% Similarity=0.107 Sum_probs=85.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++.+.+... ..-.|+-..
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 158 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV----------------YKPDNRVYE 158 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC----------------CTTSHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCC----------------CCCCHHHHH
Confidence 467999999999999999999999999999999999999853 12222221110 011223334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec----CCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD----SGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~----~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+.+.+.-.. +.++++||+.||+.|.+.||+++++- +..+..+..+|+++ +++..+...+
T Consensus 159 ~~~~~~~~~~-~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 159 LAEQALGLDR-SAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHTSCG-GGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHcCCCc-ccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 4555554444 67889999999999999999998872 33344456789887 5576665554
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=2e-06 Score=86.29 Aligned_cols=122 Identities=11% Similarity=0.049 Sum_probs=84.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|+++|+++.++|+.....+..+.+++|+.. +.++.+.+... ..-.|+-..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 168 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKI----------------YKPDPRIYQ 168 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTC----------------CTTSHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCC----------------CCCCHHHHH
Confidence 467999999999999999999999999999999999999853 12222221110 001223334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe---cCCcHHHHhhc-CEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV---DSGASVAKDLA-DIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~---~~~~~~~~~~a-d~vl~~~~~~~i~~~i 578 (792)
.+.+.+.-.. +.++++||+.||+.|.+.||+..+. ++..+..+..+ |+++ +++..+...+
T Consensus 169 ~~~~~~~~~~-~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 169 FACDRLGVNP-NEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHTCCG-GGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHcCCCc-ccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 4455554444 6788999999999999999976543 43333334557 8888 5677776665
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.6e-06 Score=87.52 Aligned_cols=122 Identities=14% Similarity=0.061 Sum_probs=88.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
++.|++.+.++.+++. ++++++|+........+.+.+|+.-+.++.++.... ..-.|+--..+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~~~~~~~~~~~----------------~kp~~~~~~~~ 182 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWDMLLCADLFGH----------------YKPDPQVYLGA 182 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCSEECCHHHHTC----------------CTTSHHHHHHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcceEEeeccccc----------------CCCCHHHHHHH
Confidence 4578999999999986 999999999999999999999986443333322211 00112333344
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC--------CcHHH--HhhcCEEeccCCchHHHHHHH
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS--------GASVA--KDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~--------~~~~~--~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.+.+.-.. +.+++|||+.||+.|.+.||++++|.+ +.+.. +..+|+++ +++..+...+.
T Consensus 183 ~~~lgi~~-~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 183 CRLLDLPP-QEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHTCCG-GGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHcCCCh-HHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 44444444 678999999999999999999999975 22233 66789998 66888777663
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.3e-05 Score=76.08 Aligned_cols=50 Identities=12% Similarity=0.129 Sum_probs=41.4
Q ss_pred cccccCceEEEEeeCCC---CCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhc
Q 045750 253 GTLTMDRAIMVNHLDSW---GFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTN 305 (792)
Q Consensus 253 GTLT~~~~~v~~~~~~~---~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~ 305 (792)
||||+|+|+|..+.... +.+.++++.++ +..+..+.||+.+||++++++.
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~la---aa~E~~SeHPlA~AIv~~a~~~ 53 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIV---GTAESNSEHPLGTAITKYCKQE 53 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHH---HHGGGSSSCHHHHHHHHHHHHH
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHH---HHHHccCCCHHHHHHHHHHHhh
Confidence 89999999999986542 45677788877 5678899999999999999653
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.20 E-value=3e-06 Score=86.79 Aligned_cols=125 Identities=14% Similarity=0.063 Sum_probs=84.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++++..... ..-.|+--
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------~kp~~~~~ 174 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVR----------------GRPFPDMA 174 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSS----------------CTTSSHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCC----------------CCCCHHHH
Confidence 567899999999999999999999999999999988888643 22222222110 00112222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe---eEEecC------------------------CcHHHHhh-cCEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV---GISVDS------------------------GASVAKDL-ADIIL 566 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v---gia~~~------------------------~~~~~~~~-ad~vl 566 (792)
..+.+.+.-...+.+++|||+.||+.|.+.||+ +|++|. +.+..++. +|+++
T Consensus 175 ~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~ 254 (277)
T 3iru_A 175 LKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVI 254 (277)
T ss_dssp HHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEe
Confidence 334444433221468899999999999999995 555552 23444444 99998
Q ss_pred ccCCchHHHHHHHH
Q 045750 567 LEKDLNVLVAGVER 580 (792)
Q Consensus 567 ~~~~~~~i~~~i~~ 580 (792)
+++..+.+.++.
T Consensus 255 --~~~~el~~~l~~ 266 (277)
T 3iru_A 255 --DSVADLETVITD 266 (277)
T ss_dssp --SSGGGTHHHHHH
T ss_pred --cCHHHHHHHHHH
Confidence 668888777754
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.20 E-value=8e-06 Score=81.86 Aligned_cols=124 Identities=14% Similarity=0.154 Sum_probs=85.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+.....+....+++|+.. +.++.+..... ..-.|+--.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 157 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGV----------------KKPHPKIFK 157 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC----------------CTTCHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCC----------------CCCCHHHHH
Confidence 467999999999999999999999999999999999999853 22222221110 001122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCeeEEe---cCCcHHHHh---hcCEEeccCCchHHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVGISV---DSGASVAKD---LADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vgia~---~~~~~~~~~---~ad~vl~~~~~~~i~~~i~~ 580 (792)
.+.+.+.-.. +.++++||+. ||+.|.+.||++++. |.+...... .+|+++ +++..+...+..
T Consensus 158 ~~~~~~g~~~-~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~~ 226 (241)
T 2hoq_A 158 KALKAFNVKP-EEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLAR 226 (241)
T ss_dssp HHHHHHTCCG-GGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHHH
T ss_pred HHHHHcCCCc-ccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHHH
Confidence 4444444444 6788999998 999999999997654 333333332 689887 567777776643
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.19 E-value=3.8e-06 Score=84.65 Aligned_cols=123 Identities=17% Similarity=0.079 Sum_probs=88.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
++.|++.+.++.+++. +++.++|+........+.+.+|+.-+.++++....... -.|+--..+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~k----------------p~~~~~~~~ 178 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWDVIIGSDINRKYK----------------PDPQAYLRT 178 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCSCCCCHHHHTCCT----------------TSHHHHHHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCeeEEEEcCcCCCCC----------------CCHHHHHHH
Confidence 5678999999999997 99999999999999999999998644444443322110 012222233
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcH--------H--HHhhcCEEeccCCchHHHHHHHH
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGAS--------V--AKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~--------~--~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.+.+.-.. +.+++|||+.||+.|.+.||+++++.+... . .+..+|+++ +++..+...+..
T Consensus 179 ~~~lgi~~-~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 179 AQVLGLHP-GEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHTTCCG-GGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHcCCCh-HHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 33333333 678999999999999999999999975221 1 356789998 678888888754
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=8.9e-06 Score=79.81 Aligned_cols=135 Identities=20% Similarity=0.140 Sum_probs=83.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCccccc-hhhhccCHHHHHHhh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDS---------------LSLAIKICHEVGIRTTHVSTG-PDLELLSQESFHERV 500 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~---------------~~~a~~ia~~~gi~~~~~~~g-~~~~~~~~~~~~~~~ 500 (792)
-++.|++.+++++|+++|++++++|+.. ...+....+++|+.-..++.. ........+ .
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~~~~~~~~-----~ 123 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE-----F 123 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGG-----G
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcCCCCcccc-----c
Confidence 3788999999999999999999999999 467777888888852221111 000000000 0
Q ss_pred hcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee--EEecC--C-cHHHHhhcCEEeccCCchHHH
Q 045750 501 KRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG--ISVDS--G-ASVAKDLADIILLEKDLNVLV 575 (792)
Q Consensus 501 ~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg--ia~~~--~-~~~~~~~ad~vl~~~~~~~i~ 575 (792)
.......+-.|+--..+.+.+.-.. +.+++|||+.||+.+.++||+. +.+.. . .+.....+|+++ +++..+.
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~~-~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~el~ 200 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHIDM-AASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLP 200 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCG-GGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHH
T ss_pred CccCcCCCCCHHHHHHHHHHcCCCH-HHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHHHH
Confidence 0000000111233334445554444 6788999999999999999974 45432 2 233345689988 5677777
Q ss_pred HHHH
Q 045750 576 AGVE 579 (792)
Q Consensus 576 ~~i~ 579 (792)
+.+.
T Consensus 201 ~~l~ 204 (211)
T 2gmw_A 201 QAIK 204 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.1e-06 Score=90.63 Aligned_cols=124 Identities=15% Similarity=0.092 Sum_probs=84.2
Q ss_pred CCCChhHHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 437 DPPKDSAKQALWRLAKKGV--KAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi--~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
-++.|++.++++.|++.|+ +++++|+.....+....+.+|+... .++.+...... ...+.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~----------------~~~~K 204 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD----------------TLVCK 204 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCS----------------SCCCT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCc----------------ccCCC
Confidence 4678999999999999999 9999999999999999999998531 11211110000 00112
Q ss_pred hHHHHHHHHhhc---CC-CEEEEEcCCcccHHHHHhCCeeEEecCCcHHH------HhhcCEEeccCCchHHHHHH
Q 045750 513 QKLRVVQSLQSV---GK-HVVGFLGDGINDSLALDAANVGISVDSGASVA------KDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 513 ~K~~iv~~l~~~---~~-~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~------~~~ad~vl~~~~~~~i~~~i 578 (792)
.|.++++.+.+. .. +.++++||+.||+.|.++||+|.+|+++.+.. ...+|+++ +++..+.+++
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 233333333221 22 56889999999999999999999987444332 33788988 5566665443
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.16 E-value=1.3e-06 Score=87.48 Aligned_cols=137 Identities=10% Similarity=0.112 Sum_probs=89.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC-CCccccchhhhccCHHHHHHh-h-hcceEEEEeChhh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR-TTHVSTGPDLELLSQESFHER-V-KRATVLARLTPTQ 513 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~-~~~~~~g~~~~~~~~~~~~~~-~-~~~~v~~~~~p~~ 513 (792)
-++.|++.++++.|+++|++++++|+.+...+..+.+ |+. ...++++..... . ..+... . .....+.+.....
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~v~~~~~~~~-~-~~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDRIYCNHASFD-N-DYIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGGEEEEEEECS-S-SBCEEECTTCCCTTCCSCCSSC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCeEEeeeeEEc-C-CceEEecCCCCccccccccCCc
Confidence 3678999999999999999999999999988888887 662 223333222110 0 000000 0 0000000012346
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhh--cCEEeccCCchHHHHHHHH
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDL--ADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~--ad~vl~~~~~~~i~~~i~~ 580 (792)
|..+++.+.... +.++++||+.||+.+.++||+.++..+..+..++. +|+++ +++..+...+..
T Consensus 152 K~~~~~~~~~~~-~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 152 KPSVIHELSEPN-QYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp HHHHHHHHCCTT-CEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred HHHHHHHHhccC-CeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 778888887666 88999999999999999999998754222333333 66766 678888777654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.14 E-value=5.6e-06 Score=81.99 Aligned_cols=122 Identities=19% Similarity=0.184 Sum_probs=81.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.+.++.++. +++++|+........+.+++|+.. +.+.+++....- . ..-.|+--
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~------------~--~kpk~~~~ 149 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGAD------------R--VKPKPDIF 149 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTT------------C--CTTSSHHH
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccC------------C--CCcCHHHH
Confidence 456788888887764 999999999999999999998853 222222211000 0 00112223
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCCcH-------HHHhh-cCEEeccCCchHHHHHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSGAS-------VAKDL-ADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~~-------~~~~~-ad~vl~~~~~~~i~~~i~ 579 (792)
..+.+.+.-.. +.++++||+.||++|++.||++ ++++++.. ..++. +|+++ +++..+.+.++
T Consensus 150 ~~~~~~l~~~~-~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 220 (229)
T 2fdr_A 150 LHGAAQFGVSP-DRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 220 (229)
T ss_dssp HHHHHHHTCCG-GGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHcCCCh-hHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHHH
Confidence 34445554444 6788999999999999999998 77765543 46676 99998 45667766653
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.09 E-value=5.3e-06 Score=80.55 Aligned_cols=119 Identities=11% Similarity=0.109 Sum_probs=83.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+ ++.|++. +++.++|+.+...+..+.+++|+.. +.++++.+... ..-.|+--.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 135 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKE----------------YKPSPKVYK 135 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC----------------CTTCHHHHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCC----------------CCCCHHHHH
Confidence 45789999 9999999 9999999999999999999999853 22222221110 001233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe----cCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV----DSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~----~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.+.+.+. . +.++++||+.||+.|.+.||++.++ +++.+..+..+|+++ +++..+...+.
T Consensus 136 ~~~~~~~--~-~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 198 (201)
T 2w43_A 136 YFLDSIG--A-KEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWIL 198 (201)
T ss_dssp HHHHHHT--C-SCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHHH
T ss_pred HHHHhcC--C-CcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHHH
Confidence 4555555 3 6788999999999999999999776 233333455689887 56777766553
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.08 E-value=3.9e-06 Score=83.68 Aligned_cols=122 Identities=12% Similarity=0.093 Sum_probs=84.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
++.|++.++++.|++ |+++.++|+..........+.++-.-+.++.+.+.... +-.|+-....
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~fd~i~~~~~~~~~----------------KP~~~~~~~~ 161 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEFDHIITAQDVGSY----------------KPNPNNFTYM 161 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCCSEEEEHHHHTSC----------------TTSHHHHHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCccCEEEEccccCCC----------------CCCHHHHHHH
Confidence 678999999999999 89999999999988887777665433333333322210 1123333344
Q ss_pred H---HHHhhcCCCEEEEEcCCc-ccHHHHHhCCeeEEecCCc-----------HHHHhhcCEEeccCCchHHHHHHH
Q 045750 518 V---QSLQSVGKHVVGFLGDGI-NDSLALDAANVGISVDSGA-----------SVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 518 v---~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vgia~~~~~-----------~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
+ +.+.-.. +.+++|||+. ||+.|.++||+++++.+.. +..+..+|+++ +++..+.+.++
T Consensus 162 l~~~~~lgi~~-~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l~ 235 (240)
T 3smv_A 162 IDALAKAGIEK-KDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAHK 235 (240)
T ss_dssp HHHHHHTTCCG-GGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHhcCCCc-hhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHHH
Confidence 3 3333333 6788999996 9999999999999995322 33457899998 56777777664
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.08 E-value=5.9e-06 Score=82.41 Aligned_cols=121 Identities=16% Similarity=0.082 Sum_probs=84.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.++ .|++++++|+..........+.+|+.. +.++.+.+... ..-.|+--.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 169 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGV----------------LKPRPEIFH 169 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTC----------------CTTSHHHHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCC----------------CCCCHHHHH
Confidence 46789999999999 999999999999999999999999853 12222211110 000122222
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCeeEEecCCcH--HHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVGISVDSGAS--VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vgia~~~~~~--~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+.+.+.-.. +.++++||+. ||+.|.+.||+++++.+... ..+..+|+++ +++..+..+.
T Consensus 170 ~~~~~lgi~~-~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 170 FALSATQSEL-RESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHTTCCG-GGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHcCCCc-ccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 3333333333 6789999995 99999999999999975443 5666799998 5576665544
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.08 E-value=6.8e-06 Score=82.40 Aligned_cols=121 Identities=15% Similarity=0.121 Sum_probs=80.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC-CCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR-TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
+.|++.+.++.|+++|+++.++|+.....+..+.+++|+. -+.++++.+... ..-.|+--..+
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~f~~~~~~~~~~~----------------~Kp~p~~~~~~ 174 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGIR----------------RKPAPDMTSEC 174 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTTTCSEEEEECTTSC----------------CTTSSHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCcceeEEEecCCCCC----------------CCCCHHHHHHH
Confidence 5689999999999999999999999998888888999874 122222211100 00112222344
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEe--cCCc-HHHH-hhcCEEeccCCchHHHHHH
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISV--DSGA-SVAK-DLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~--~~~~-~~~~-~~ad~vl~~~~~~~i~~~i 578 (792)
.+.+.-.. +.++++||+.||+.|.++||+. |++ +++. +..+ ..+|+++ +++..+...+
T Consensus 175 ~~~l~~~~-~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 175 VKVLGVPR-DKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHTCCG-GGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHcCCCH-HHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 44444344 6788999999999999999994 344 4333 3343 3688887 5576665544
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.06 E-value=7e-06 Score=83.04 Aligned_cols=121 Identities=17% Similarity=0.134 Sum_probs=85.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|+ |+++.++|+.+...+..+.+++|+.. +.++.+.+... ..-.|+--.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 154 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV----------------FKPHPDSYA 154 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC----------------CTTSHHHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCC----------------CCCCHHHHH
Confidence 57799999999999 99999999999999999999999853 12222221110 011223334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCC---------------------------cHHHHhhcCEEecc
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSG---------------------------ASVAKDLADIILLE 568 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~---------------------------~~~~~~~ad~vl~~ 568 (792)
.+.+.+.-.. +.++++||+.||+.|.+.||++.++.+. .+..+..+|+++
T Consensus 155 ~~~~~~~~~~-~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 231 (253)
T 1qq5_A 155 LVEEVLGVTP-AEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV-- 231 (253)
T ss_dssp HHHHHHCCCG-GGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--
T ss_pred HHHHHcCCCH-HHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee--
Confidence 4455554444 6788999999999999999999988754 223345689888
Q ss_pred CCchHHHHHHH
Q 045750 569 KDLNVLVAGVE 579 (792)
Q Consensus 569 ~~~~~i~~~i~ 579 (792)
+++..+...+.
T Consensus 232 ~~~~el~~~l~ 242 (253)
T 1qq5_A 232 PALGDLPRLVR 242 (253)
T ss_dssp SSGGGHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 56777777664
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.06 E-value=5.2e-06 Score=82.31 Aligned_cols=117 Identities=15% Similarity=0.047 Sum_probs=80.7
Q ss_pred CCChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeCh--hhH
Q 045750 438 PPKDSAKQALWRLAKKG-VKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTP--TQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~G-i~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K 514 (792)
++.|++.+.++.+++.| +++.++|+..........+.+|+.... ..+++...| +--
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f---------------------~~~~~~~kpk~~~~ 163 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF---------------------DHIEVMSDKTEKEY 163 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC---------------------SEEEEESCCSHHHH
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh---------------------heeeecCCCCHHHH
Confidence 56789999999999999 999999999999999999999984310 013333223 222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCeeEEe-------cCCcHHHHhhc-CEEeccCCchHHHHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVGISV-------DSGASVAKDLA-DIILLEKDLNVLVAGV 578 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vgia~-------~~~~~~~~~~a-d~vl~~~~~~~i~~~i 578 (792)
..+.+.+.-.. +.++++||+. ||+.|.+.||+++++ +++....+..+ |+++ +++..+...+
T Consensus 164 ~~~~~~lgi~~-~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 164 LRLLSILQIAP-SELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp HHHHHHHTCCG-GGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred HHHHHHhCCCc-ceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 23333333333 6789999996 999999999998887 23333334444 8887 5677766543
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.04 E-value=1e-06 Score=86.27 Aligned_cols=115 Identities=11% Similarity=0.095 Sum_probs=79.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeC--hhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLT--PTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~--p~~ 513 (792)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+... .++.+.+.. ... |+-
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~KP~~~~ 143 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP------------------KRKPDPLP 143 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS------------------CCTTSSHH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCC------------------CCCCCcHH
Confidence 4689999999999999 99999999999999989888887431 111111110 011 222
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC----CcHHHHhhcCEEeccCCchHHH
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS----GASVAKDLADIILLEKDLNVLV 575 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~----~~~~~~~~ad~vl~~~~~~~i~ 575 (792)
...+.+.+.-.. +.++++||+.||+.|.+.||+++++.+ +.+..++ +|+++. ++..+.
T Consensus 144 ~~~~~~~~~~~~-~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 144 LLTALEKVNVAP-QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp HHHHHHHTTCCG-GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred HHHHHHHcCCCc-ccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 234444444334 678899999999999999999999742 3455555 999883 455443
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.04 E-value=8.5e-06 Score=81.16 Aligned_cols=124 Identities=12% Similarity=0.091 Sum_probs=85.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
-++.|++.+.++.|++. +++.++|+.....+....+.+|+.. +.++.+.+... ..-.|+--
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~ 164 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGF----------------QKPMKEYF 164 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTS----------------CTTCHHHH
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCC----------------CCCChHHH
Confidence 35678999999999999 9999999999999999999999853 12222211110 00012222
Q ss_pred HHHHHHHh-hcCCCEEEEEcCCc-ccHHHHHhCCee-EEecC--CcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 515 LRVVQSLQ-SVGKHVVGFLGDGI-NDSLALDAANVG-ISVDS--GASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 515 ~~iv~~l~-~~~~~~v~~iGDg~-ND~~~l~~A~vg-ia~~~--~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
..+.+.+. -.. +.++++||+. ||+.|.+.||++ +.++. ..+..+..+|+++ +++..+.+.++.
T Consensus 165 ~~~~~~~g~~~~-~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~~ 232 (238)
T 3ed5_A 165 NYVFERIPQFSA-EHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILNI 232 (238)
T ss_dssp HHHHHTSTTCCG-GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHTC
T ss_pred HHHHHHcCCCCh-hHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHHh
Confidence 23333333 222 6789999998 999999999995 44443 3566677899998 668888877753
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.03 E-value=5.8e-06 Score=84.90 Aligned_cols=114 Identities=19% Similarity=0.053 Sum_probs=80.3
Q ss_pred CCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCCC-CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKK-GVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~-Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
.+.|++.+.++.+++. |+++.++|+.....+....+.+|+.. ..++++.+...- .-.|+--.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~~i~~~~~~~~~----------------kp~~~~~~ 177 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPEYFITANDVKQG----------------KPHPEPYL 177 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCSSEECGGGCSSC----------------TTSSHHHH
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccCEEEEcccCCCC----------------CCChHHHH
Confidence 3578999999999999 99999999999999999999999852 233333321110 01233334
Q ss_pred HHHHHHhh-------cCCCEEEEEcCCcccHHHHHhCCeeEEe---cCCcHHHHh-hcCEEecc
Q 045750 516 RVVQSLQS-------VGKHVVGFLGDGINDSLALDAANVGISV---DSGASVAKD-LADIILLE 568 (792)
Q Consensus 516 ~iv~~l~~-------~~~~~v~~iGDg~ND~~~l~~A~vgia~---~~~~~~~~~-~ad~vl~~ 568 (792)
.+.+.+.- .. +.++++||+.||+.|++.||+++++ +++.+..++ .||+++.+
T Consensus 178 ~~~~~lgi~~~~~~~~~-~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 178 KGRNGLGFPINEQDPSK-SKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHTTCCCCSSCGGG-SCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHcCCCccccCCCc-ceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 45555554 44 6789999999999999999987766 444444444 58998743
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.2e-05 Score=80.74 Aligned_cols=50 Identities=22% Similarity=0.280 Sum_probs=39.5
Q ss_pred hHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhCC-eeEEecCCcHHHHhhcC
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGD----GINDSLALDAAN-VGISVDSGASVAKDLAD 563 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGD----g~ND~~~l~~A~-vgia~~~~~~~~~~~ad 563 (792)
+|..-++.+.+ ..+.++++|| |.||.+||+.|+ +|++|+|+.+..|..++
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~ 241 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEK 241 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHH
Confidence 45555555555 3378999999 699999999996 89999999888887654
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.99 E-value=3e-06 Score=85.56 Aligned_cols=116 Identities=15% Similarity=0.098 Sum_probs=75.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHhCCCC--Cccccch--hhhccCHHHHHHhhhcceEEEEeChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC-HEVGIRT--THVSTGP--DLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia-~~~gi~~--~~~~~g~--~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
++.|++.+.++.|++.|+++.++|+.......... +..|+.. +.++.++ ... ...
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~--------------------~~K 171 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQ--------------------HGK 171 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCC--------------------SCT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhcc--------------------CCC
Confidence 56889999999999999999999999876655433 2233321 1122221 110 011
Q ss_pred hHHHHHHHH-hhcC--C--CEEEEEcCCcccHHHHHhCC---eeEEecCCcHHHHhhcCEEeccCCchHHH
Q 045750 513 QKLRVVQSL-QSVG--K--HVVGFLGDGINDSLALDAAN---VGISVDSGASVAKDLADIILLEKDLNVLV 575 (792)
Q Consensus 513 ~K~~iv~~l-~~~~--~--~~v~~iGDg~ND~~~l~~A~---vgia~~~~~~~~~~~ad~vl~~~~~~~i~ 575 (792)
.|.++++.+ ++.| . +.++++||+.||+.|.+.|| ++++++++.+..+..||+++ +++..+.
T Consensus 172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~--~sl~el~ 240 (250)
T 3l5k_A 172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL--NSLQDFQ 240 (250)
T ss_dssp TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC--SCGGGCC
T ss_pred CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee--cCHHHhh
Confidence 122233333 2222 1 56889999999999999999 45555777777889999998 4455443
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.95 E-value=1.8e-05 Score=75.95 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=67.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE--eChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDS-LSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR--LTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~-~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~--~~p~~K 514 (792)
++.|++.+++++|+++|++++++||++ ...+..+.+.+|+... |.. ..+..|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~-------------------------f~~~~~~~~~k 122 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY-------------------------FVHREIYPGSK 122 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT-------------------------EEEEEESSSCH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh-------------------------cceeEEEeCch
Confidence 578999999999999999999999999 7999999999998641 111 122334
Q ss_pred HHHH----HHHhhcCCCEEEEEcCCcccHHHHHhCCeeEE-ecC
Q 045750 515 LRVV----QSLQSVGKHVVGFLGDGINDSLALDAANVGIS-VDS 553 (792)
Q Consensus 515 ~~iv----~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia-~~~ 553 (792)
.+.. +.+.-.. +.+++|||+.+|+.+.++||+... +..
T Consensus 123 ~~~~~~~~~~~~~~~-~~~~~igD~~~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 123 ITHFERLQQKTGIPF-SQMIFFDDERRNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp HHHHHHHHHHHCCCG-GGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred HHHHHHHHHHcCCCh-HHEEEEeCCccChHHHHHcCCEEEEECC
Confidence 3333 3333233 568899999999999999998544 443
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.92 E-value=1.1e-05 Score=78.90 Aligned_cols=115 Identities=15% Similarity=0.085 Sum_probs=79.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe-ChhhHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL-TPTQKLR 516 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-~p~~K~~ 516 (792)
++.|++.+.++.|++ |+++.++|+.+...+....+++|+.... + .+++.- .+..|.+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~-------------------~i~~~~~~~Kp~p~ 141 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--D-------------------GIYGSSPEAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--S-------------------EEEEECSSCCSHHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--e-------------------eeecCCCCCCCChH
Confidence 467999999999999 9999999999998888888999985310 0 022221 1233444
Q ss_pred HHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCe---eEEecCC-cHHHH-hhcCEEeccCCchHHHH
Q 045750 517 VVQSLQSV-G--KHVVGFLGDGINDSLALDAANV---GISVDSG-ASVAK-DLADIILLEKDLNVLVA 576 (792)
Q Consensus 517 iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~v---gia~~~~-~~~~~-~~ad~vl~~~~~~~i~~ 576 (792)
+.+...++ | .+.++++||+.||+.|.++||+ +++++++ .+..+ ..+|+++ +++..+..
T Consensus 142 ~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~--~~~~el~~ 207 (210)
T 2ah5_A 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLA 207 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHH
Confidence 44443332 2 1568899999999999999999 5666654 33444 3589988 44555544
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.90 E-value=1.2e-05 Score=81.99 Aligned_cols=43 Identities=14% Similarity=0.217 Sum_probs=37.8
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTG---DSLSLAIKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tg---d~~~~a~~ia~~~gi~ 478 (792)
.+.+-|+++++|++++++|++++++|| ++........+.+|++
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 556778999999999999999999999 7888888888888884
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.90 E-value=1.8e-05 Score=75.80 Aligned_cols=104 Identities=14% Similarity=0.070 Sum_probs=70.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLR 516 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 516 (792)
+.|++.+.++.+++.|++++++|+... .+....+++|+... .++.+.+.. . ...|.+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~------------------~--~kp~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGF------------------K--RKPNPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCC------------------C--CTTSCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccC------------------C--CCCCHH
Confidence 679999999999999999999999874 56777788887431 112211110 0 111223
Q ss_pred HHHHH-hhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC
Q 045750 517 VVQSL-QSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLAD 563 (792)
Q Consensus 517 iv~~l-~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad 563 (792)
.++.+ ++.|-..++++||+.||+.|.+.||+++++-+.....++..+
T Consensus 142 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 33332 333312688999999999999999999888766666666544
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.90 E-value=1.3e-05 Score=81.87 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=36.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTG---DSLSLAIKICHEVGIR 478 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tg---d~~~~a~~ia~~~gi~ 478 (792)
+.+-|+++++|++++++|++++++|| ++........+++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45668899999999999999999988 7888888888899984
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.90 E-value=1e-05 Score=82.47 Aligned_cols=123 Identities=16% Similarity=0.153 Sum_probs=85.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|++.|+++.++|+... ....+.+.+|+.. +.++.+.+... ..-.|+--.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 168 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLTSEAAGW----------------PKPDPRIFQ 168 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCEEEHHHHSS----------------CTTSHHHHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEEEeecccCC----------------CCCCHHHHH
Confidence 3579999999999999999999999776 4678888999843 22222222110 111233344
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCeeEEecCCcHH------HHhhcCEEeccCCchHHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVGISVDSGASV------AKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vgia~~~~~~~------~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.+.+.+.-.. +.+++|||+. ||+.|.++||+++++.+.... ....+|+++ +++..+...++.
T Consensus 169 ~~~~~~g~~~-~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~~ 237 (263)
T 3k1z_A 169 EALRLAHMEP-VVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALDC 237 (263)
T ss_dssp HHHHHHTCCG-GGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHHH
T ss_pred HHHHHcCCCH-HHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHHH
Confidence 5555555444 6789999997 999999999999998643221 223688888 668888777743
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.81 E-value=7.8e-05 Score=71.55 Aligned_cols=134 Identities=12% Similarity=0.072 Sum_probs=88.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSL---SLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~---~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
-++.|++.++++.|+++|+++.++|+... ..+..+.+++|+... .++.+.+..... -..+-.|
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~------------~~~KP~p 100 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPG------------KMEKPDK 100 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTT------------CCCTTSH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccccc------------CCCCcCH
Confidence 46899999999999999999999998876 888999999998531 111111100000 0000122
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCC-cccHHHHHhCCeeEE-ecCCcH-----HHH-hhcCEEeccCCchHHHHHHHHhHH
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDG-INDSLALDAANVGIS-VDSGAS-----VAK-DLADIILLEKDLNVLVAGVERGRV 583 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg-~ND~~~l~~A~vgia-~~~~~~-----~~~-~~ad~vl~~~~~~~i~~~i~~gR~ 583 (792)
+--..+.+.+.... ..+++|||+ .+|+.+-++||+... +.++.. ... ..+|+++...++..+.++++..+.
T Consensus 101 ~~~~~~~~~~~~~~-~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~ 179 (189)
T 3ib6_A 101 TIFDFTLNALQIDK-TEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKK 179 (189)
T ss_dssp HHHHHHHHHHTCCG-GGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCc-ccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHHH
Confidence 33344555554444 678899999 799999999999544 433221 111 267888865588888888876543
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.72 E-value=6.1e-05 Score=72.77 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=70.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.| +++++|+.+......+.+++|+.. +.++.+.+... ..-.|+--.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 148 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGV----------------MKPNPAMYR 148 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSC----------------CTTCHHHHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCC----------------CCCCHHHHH
Confidence 46799999999999999 999999999999999999999753 12222221110 011233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
.+.+.+.-.. +.++++||+.||+.|.+.||+...+-+
T Consensus 149 ~~~~~~~~~~-~~~~~vgD~~~Di~~a~~aG~~~~~~~ 185 (200)
T 3cnh_A 149 LGLTLAQVRP-EEAVMVDDRLQNVQAARAVGMHAVQCV 185 (200)
T ss_dssp HHHHHHTCCG-GGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHcCCCH-HHeEEeCCCHHHHHHHHHCCCEEEEEC
Confidence 4555554444 678899999999999999999887753
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00017 Score=70.65 Aligned_cols=123 Identities=16% Similarity=0.189 Sum_probs=82.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|++.|+++.++|+.+...+....+.+|+.. +.++.+.+... .+-.|+--.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~----------------~KP~p~~~~ 147 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKN----------------GKPDPEIYL 147 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSS----------------CTTSTHHHH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCC----------------CcccHHHHH
Confidence 357899999999999999999999999999999999999853 22222222211 111233344
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-E-Ee--c-CCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-I-SV--D-SGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-i-a~--~-~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
...+.+.-.. +.+++|||+.+|+.+-++||+. | ++ | +..+..+++.+..+. +...+.+.++
T Consensus 148 ~a~~~lg~~p-~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~~l~ 213 (216)
T 3kbb_A 148 LVLERLNVVP-EKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILNVLK 213 (216)
T ss_dssp HHHHHHTCCG-GGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHHHHH
T ss_pred HHHHhhCCCc-cceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHHHHH
Confidence 5555565555 6788999999999999999984 2 23 3 344555555443333 2444555543
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00012 Score=73.71 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=81.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeC--hhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT--PTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~ 515 (792)
++.|++.+.++.|+ .|+++.++|+..........+.+|+.... ..+++... |+--.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f---------------------~~i~~~~kp~~~~~~ 169 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF---------------------PRIEVVSEKDPQTYA 169 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC---------------------CCEEEESCCSHHHHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC---------------------ceeeeeCCCCHHHHH
Confidence 45799999999999 99999999999999888888888874310 01333322 33334
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCeeEEec-CCcH--------HHHhhcCE-EeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVGISVD-SGAS--------VAKDLADI-ILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vgia~~-~~~~--------~~~~~ad~-vl~~~~~~~i~~~i~ 579 (792)
.+.+.+.-.. +.++++||+. ||+.|.+.||+++++- .+.. .....+|+ ++ +++..+...+.
T Consensus 170 ~~~~~l~~~~-~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 170 RVLSEFDLPA-ERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHTCCG-GGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHhCcCc-hhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 4455554444 6788999999 9999999999998763 2211 11345787 66 56777776664
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.69 E-value=1.8e-05 Score=77.36 Aligned_cols=101 Identities=8% Similarity=-0.015 Sum_probs=69.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------hCCCC--CccccchhhhccCHHHHHHhhhcceEEEEe
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE------VGIRT--THVSTGPDLELLSQESFHERVKRATVLARL 509 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~------~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 509 (792)
++.|++.+.++.|++ |++++++|+........+.++ +|+.. +.++.+.+... .+-
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~----------------~Kp 151 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGK----------------YKP 151 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTC----------------CTT
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCC----------------CCC
Confidence 467999999999999 999999999998888877776 56632 11111111100 011
Q ss_pred ChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcH
Q 045750 510 TPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGAS 556 (792)
Q Consensus 510 ~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~ 556 (792)
.|+--..+.+.+.-.. +.++++||+.||+.|.+.||++.++.++.+
T Consensus 152 ~~~~~~~~~~~~~~~~-~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 152 NEDIFLEMIADSGMKP-EETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp SHHHHHHHHHHHCCCG-GGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CHHHHHHHHHHhCCCh-HHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 2223344555554444 678899999999999999999999876543
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.61 E-value=2.6e-05 Score=76.84 Aligned_cols=106 Identities=14% Similarity=0.061 Sum_probs=65.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCccccchhhh--ccCHHHHHHh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSL---------------SLAIKICHEVGIRTTHVSTGPDLE--LLSQESFHER 499 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~---------------~~a~~ia~~~gi~~~~~~~g~~~~--~~~~~~~~~~ 499 (792)
.++.|++.+++++|+++|++++++|+... ..+....+++|+.-..++...... .+. ..
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~-----~~ 129 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGP-----LA 129 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCST-----TC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCcee-----ec
Confidence 57889999999999999999999999988 677888888887421111000000 000 00
Q ss_pred hhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 500 VKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 500 ~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
........-.|.--..+.+.+.-.. +.++||||+.||+.+.+.||+..
T Consensus 130 -~~~~~~~KP~~~~~~~~~~~~~i~~-~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 130 -IPDHPMRKPNPGMLVEAGKRLALDL-QRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -CSSCTTSTTSCHHHHHHHHHHTCCG-GGCEEEESSHHHHHHHHHTTCSE
T ss_pred -ccCCccCCCCHHHHHHHHHHcCCCH-HHEEEEeCCHHHHHHHHHCCCCE
Confidence 0000000001112223334443333 66889999999999999999864
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00022 Score=72.31 Aligned_cols=121 Identities=15% Similarity=0.112 Sum_probs=82.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|++ |+++.++|+.+...+....+.+|+.. +.++.+.+... .+-.|+--.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~KP~p~~~~ 183 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKE----------------EKPAPSIFY 183 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSS----------------CTTCHHHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCC----------------CCCCHHHHH
Confidence 577999999999998 59999999999999999999999853 12222221110 001133334
Q ss_pred HHHHHHhhcCCCEEEEEcCC-cccHHHHHhCCe--eEEecCCcH---HHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDG-INDSLALDAANV--GISVDSGAS---VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg-~ND~~~l~~A~v--gia~~~~~~---~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+.+.+.-.. +.+++|||+ .||+.+-++||+ .|.+..+.. .....+|+++ +++..+...+
T Consensus 184 ~~~~~~~~~~-~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 184 HCCDLLGVQP-GDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHTCCG-GGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHcCCCh-hhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 4445554444 678899995 999999999999 677764321 2334688887 5577776655
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00077 Score=62.68 Aligned_cols=139 Identities=17% Similarity=0.196 Sum_probs=85.0
Q ss_pred cccCceEEEEeeCCCC---CCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhc-CcccccccceEeEEeCCCCCCCeEE
Q 045750 255 LTMDRAIMVNHLDSWG---FPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTN-GYRFQASKWKKLDEIPFDFVRRKVS 330 (792)
Q Consensus 255 LT~~~~~v~~~~~~~~---~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~-~~~~~~~~~~~~~~~~f~~~~k~~~ 330 (792)
||+|+|+|.++....+ .+.++++.++ +..+..+.||+.+||++++++. +... .......+.+| .+.+.
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~~~~lL~la---aslE~~SeHPlA~AIv~~a~~~~~~~~-~~~~~~f~~i~----G~Gv~ 72 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLPLRKVLAVV---GTAEASSEHPLGVAVTKYCKEELGTET-LGYCTDFQAVP----GCGIG 72 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSCHHHHHHHH---HHHHTTSCSTTHHHHHHHHHHHHTCCC-CCCEEEEEEET----TTEEE
T ss_pred CCCceeEEEEEEeeCCcCCCCHHHHHHHH---HHHHccCCChHHHHHHHHHHHhcCCCC-CCCcCceEEec----CccEE
Confidence 7999999999865432 4667788877 5678899999999999999654 4321 11223344444 45555
Q ss_pred EEEeeCC----------------------CCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHH
Q 045750 331 VILETES----------------------ITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILN 388 (792)
Q Consensus 331 v~~~~~~----------------------~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (792)
..+.... ..+.. ........+.-|+++.+.+..-. ++++ +..
T Consensus 73 a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~iGn~~~m~~~gi~-----------~~~~----~~~ 136 (165)
T 2arf_A 73 CKVSNVEGILAHSERPLSAPASHLNEAGSLPAEK-DAVPQTFSVLIGNREWLRRNGLT-----------ISSD----VSD 136 (165)
T ss_dssp EEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCC-CCCCCEEEEEEECHHHHHHHHCS-----------SCHH----HHH
T ss_pred EEEcCccccccccccccccccccccccccccccc-ccCCCceEEEEcCHHHHHhcCCC-----------CCHH----HHH
Confidence 5554310 00000 01113346677988876542211 1222 233
Q ss_pred HHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCC
Q 045750 389 LGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYD 437 (792)
Q Consensus 389 ~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d 437 (792)
....+..+|..++.+|. |..++|++++.|
T Consensus 137 ~~~~~~~~G~T~v~va~--------------------dg~~~g~i~l~D 165 (165)
T 2arf_A 137 AMTDHEMKGQTAILVAI--------------------DGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHTTTSEEEEEEE--------------------TTEEEEEEEECC
T ss_pred HHHHHHhCCCeEEEEEE--------------------CCEEEEEEEEEC
Confidence 34566778998888886 338999999987
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=2.8e-05 Score=79.05 Aligned_cols=60 Identities=25% Similarity=0.259 Sum_probs=49.6
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhCC-eeEEecCCcHHHHhhcCEEeccCCc
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGD----GINDSLALDAAN-VGISVDSGASVAKDLADIILLEKDL 571 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGD----g~ND~~~l~~A~-vgia~~~~~~~~~~~ad~vl~~~~~ 571 (792)
..|...++.+.....+.|+++|| +.||.+||+.|+ +|++|+|+.+.+|+.||+|+.+++-
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC--
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCcC
Confidence 46888888882223378999999 999999999999 5999999999999999999866553
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.48 E-value=6.1e-05 Score=67.69 Aligned_cols=97 Identities=14% Similarity=0.079 Sum_probs=65.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++.|++.+++++|+++|+++.++|+.+...+..+.+++|+.. +.++.+.+... .+-.|+--
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------------~Kp~~~~~ 80 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGV----------------EKPEEAAF 80 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSC----------------CTTSHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCC----------------CCCCHHHH
Confidence 3567899999999999999999999999888888888888743 12222211100 00112222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
..+.+.+.... +.++++||+.+|+.+.+++|+...
T Consensus 81 ~~~~~~~~~~~-~~~~~vgD~~~di~~a~~~G~~~i 115 (137)
T 2pr7_A 81 QAAADAIDLPM-RDCVLVDDSILNVRGAVEAGLVGV 115 (137)
T ss_dssp HHHHHHTTCCG-GGEEEEESCHHHHHHHHHHTCEEE
T ss_pred HHHHHHcCCCc-ccEEEEcCCHHHHHHHHHCCCEEE
Confidence 33344443333 568899999999999999998433
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00047 Score=66.42 Aligned_cols=121 Identities=12% Similarity=0.032 Sum_probs=74.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
++.|++.++++.|+++|+++.++||.....+..+.+ ...+.++++.+... .+-.|+--...
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~~d~v~~~~~~~~----------------~KP~p~~~~~a 96 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PVNDWMIAAPRPTA----------------GWPQPDACWMA 96 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TTTTTCEECCCCSS----------------CTTSTHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---ccCCEEEECCcCCC----------------CCCChHHHHHH
Confidence 578999999999999999999999999887755443 11122222211100 00012222233
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCcH--------------------------H-HHhhcCEEeccC
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGAS--------------------------V-AKDLADIILLEK 569 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~~--------------------------~-~~~~ad~vl~~~ 569 (792)
.+.+.-...+.++||||+.+|+.+-++||+ .|++..+.. . ....+|+++ +
T Consensus 97 ~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi--~ 174 (196)
T 2oda_A 97 LMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVI--D 174 (196)
T ss_dssp HHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--S
T ss_pred HHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEe--C
Confidence 333332211468899999999999999998 566643211 1 123488888 5
Q ss_pred CchHHHHHHH
Q 045750 570 DLNVLVAGVE 579 (792)
Q Consensus 570 ~~~~i~~~i~ 579 (792)
++..+...+.
T Consensus 175 ~~~eL~~~l~ 184 (196)
T 2oda_A 175 HLGELESCLA 184 (196)
T ss_dssp SGGGHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777776663
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00037 Score=74.22 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=84.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--C--ccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--T--HVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
-++.|++.++++.|+++|+++.++|+.+...+....+++|+.. + .++++.+.... .+......-..+-.|+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-----~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA-----ENMYPQARPLGKPNPF 288 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-----HHHSTTSCCCCTTSTH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc-----ccccccccCCCCCCHH
Confidence 3678999999999999999999999999999999999999853 2 45555443210 0000000000001111
Q ss_pred hHHHHHHHHh--------------hcCCCEEEEEcCCcccHHHHHhCCee-EEecCCc------HHH-HhhcCEEeccCC
Q 045750 513 QKLRVVQSLQ--------------SVGKHVVGFLGDGINDSLALDAANVG-ISVDSGA------SVA-KDLADIILLEKD 570 (792)
Q Consensus 513 ~K~~iv~~l~--------------~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~------~~~-~~~ad~vl~~~~ 570 (792)
--....+.+. -.. ..+++|||+.+|+.+-++||+. |++..+. +.. ...+|+++ ++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p-~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~s 365 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNK-DDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NH 365 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCT-TTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SS
T ss_pred HHHHHHHHcCCccccccccccccCCCC-cCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CC
Confidence 1112222211 112 6688999999999999999985 4454321 222 23689988 56
Q ss_pred chHHHHHHH
Q 045750 571 LNVLVAGVE 579 (792)
Q Consensus 571 ~~~i~~~i~ 579 (792)
+..+...+.
T Consensus 366 l~eL~~~l~ 374 (384)
T 1qyi_A 366 LGELRGVLD 374 (384)
T ss_dssp GGGHHHHHS
T ss_pred HHHHHHHHH
Confidence 887777663
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00014 Score=71.77 Aligned_cols=116 Identities=16% Similarity=0.175 Sum_probs=74.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|++. +++.++|+.... .+.+|+.. +.++.+.+... ..-.|+--.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 162 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGI----------------GKPDPAPFL 162 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTC----------------CTTSHHHHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccCC----------------CCcCHHHHH
Confidence 4678999999999999 999999987654 34445431 11111111000 011122234
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCeeEEe---c-CCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVGISV---D-SGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vgia~---~-~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.+.+.+.-.. +.++++||+. ||+.|.+.||++.++ + +..+. +..+|+++ +++..+.+.++
T Consensus 163 ~~~~~~~~~~-~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 163 EALRRAKVDA-SAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHTCCG-GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHhCCCc-hheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 4445554444 6788999997 999999999998887 2 22222 66789988 66888877764
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.42 E-value=2e-05 Score=76.56 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=64.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE-VGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~-~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.+.++.|++.|++++++|+........+.++ +|+.. +.++.+.+... ..-.|+-.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~ 154 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM----------------RKPEARIY 154 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC----------------CTTCHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCC----------------CCCCHHHH
Confidence 4679999999999999999999999765443332222 22210 11111111000 00122333
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVA 558 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~ 558 (792)
..+.+.+.-.. +.++++||+.||+.|.+.||+...+.+..+..
T Consensus 155 ~~~~~~~~~~~-~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~ 197 (206)
T 2b0c_A 155 QHVLQAEGFSP-SDTVFFDDNADNIEGANQLGITSILVKDKTTI 197 (206)
T ss_dssp HHHHHHHTCCG-GGEEEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred HHHHHHcCCCH-HHeEEeCCCHHHHHHHHHcCCeEEEecCCchH
Confidence 44555555444 67889999999999999999988876544433
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00017 Score=71.84 Aligned_cols=86 Identities=15% Similarity=0.169 Sum_probs=67.7
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSL----SLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~----~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
..++.|++.+.++.|+++|+++.++||++. ..+..-.+++|++... ...++.+...
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--------------------~~~Lilr~~~ 158 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--------------------DKTLLLKKDK 158 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--------------------TTTEEEESSC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc--------------------cceeEecCCC
Confidence 456789999999999999999999999975 4777778899996410 0014445445
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLA 541 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~ 541 (792)
..|....+.+.+.+...++++||..+|.++
T Consensus 159 ~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 159 SNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred CChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 678888888888554789999999999887
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00013 Score=72.27 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=71.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------hCCCC--CccccchhhhccCHHHHHHhhhcceEEEEe
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE------VGIRT--THVSTGPDLELLSQESFHERVKRATVLARL 509 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~------~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 509 (792)
++.|++.++++.|++. +++.++|+........+.+. +|+.. +.++.+.+... .+-
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~----------------~KP 174 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKM----------------AKP 174 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTC----------------CTT
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCC----------------CCC
Confidence 3679999999999999 99999999999888876643 44421 11111111100 111
Q ss_pred ChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh
Q 045750 510 TPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD 560 (792)
Q Consensus 510 ~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~ 560 (792)
.|+--..+.+.+.-.. +.+++|||+.||+.|.++||++.++.++.+..++
T Consensus 175 ~~~~~~~~~~~~g~~~-~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~ 224 (229)
T 4dcc_A 175 EPEIFKAVTEDAGIDP-KETFFIDDSEINCKVAQELGISTYTPKAGEDWSH 224 (229)
T ss_dssp CHHHHHHHHHHHTCCG-GGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred CHHHHHHHHHHcCCCH-HHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 2333445555555444 6788999999999999999999988765544443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.29 E-value=3.1e-05 Score=77.92 Aligned_cols=54 Identities=20% Similarity=0.266 Sum_probs=43.8
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhCCe-eEEecCCcHHHHhhcCEE
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGD----GINDSLALDAANV-GISVDSGASVAKDLADII 565 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGD----g~ND~~~l~~A~v-gia~~~~~~~~~~~ad~v 565 (792)
.+|...++.+.....+.|+++|| +.||.+||+.|+. |++|+|+.+.+|+.||+|
T Consensus 187 ~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 187 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred CchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 36777777772223378999999 9999999999998 999999999999999986
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00073 Score=68.73 Aligned_cols=42 Identities=14% Similarity=0.117 Sum_probs=38.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLT---GDSLSLAIKICHEVGIR 478 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~T---gd~~~~a~~ia~~~gi~ 478 (792)
+++.+++.+++++++++|++++++| |+.........+++|++
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 6677899999999999999999999 99999998888999885
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00062 Score=68.42 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=79.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++.|++.+.++.|++.|+++.+.|+.. .+....+.+|+.. +.++++.+... .+-.|+--
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~~----------------~KP~p~~~ 176 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCKN----------------NKPHPEIF 176 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCCS----------------CTTSSHHH
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccCC----------------CCCcHHHH
Confidence 3567999999999999999999888765 3566788899853 23333333221 11124444
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCcHHHHhhcCEEeccCCchHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGASVAKDLADIILLEKDLNVL 574 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~~~~~~~ad~vl~~~~~~~i 574 (792)
..+.+.+.-.. +.+++|||+.+|+.+-++||+ .|++++..+ .+.||+++ +++..+
T Consensus 177 ~~a~~~lg~~p-~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~--~~~ad~vi--~~l~eL 232 (250)
T 4gib_A 177 LMSAKGLNVNP-QNCIGIEDASAGIDAINSANMFSVGVGNYEN--LKKANLVV--DSTNQL 232 (250)
T ss_dssp HHHHHHHTCCG-GGEEEEESSHHHHHHHHHTTCEEEEESCTTT--TTTSSEEE--SSGGGC
T ss_pred HHHHHHhCCCh-HHeEEECCCHHHHHHHHHcCCEEEEECChhH--hccCCEEE--CChHhC
Confidence 55666665555 678899999999999999998 667764433 23589988 455554
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00033 Score=71.10 Aligned_cols=42 Identities=14% Similarity=0.196 Sum_probs=37.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLT---GDSLSLAIKICHEVGIR 478 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~T---gd~~~~a~~ia~~~gi~ 478 (792)
+..-|+++++|++++++|++++++| |+.........+++|+.
T Consensus 20 ~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 20 KSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 4333999999999999999999999 88999998889999984
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0002 Score=71.47 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=67.1
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSL----SLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~----~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
+.++.|++.+.++.|+++|++++++||++. ..+..-.+++|++... ...++.+...
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~--------------------~~~Lilr~~~ 158 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE--------------------ESAFYLKKDK 158 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS--------------------GGGEEEESSC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc--------------------ccceeccCCC
Confidence 457789999999999999999999999965 4777778889996410 0014445445
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLA 541 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~ 541 (792)
..|....+.+.+.|-..|+++||..+|.++
T Consensus 159 ~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 159 SAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp SCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred CChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 678888888887754789999999999886
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0023 Score=64.66 Aligned_cols=41 Identities=17% Similarity=0.226 Sum_probs=36.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLT---GDSLSLAIKICHEVGIR 478 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~T---gd~~~~a~~ia~~~gi~ 478 (792)
.+.+++.++++.+++.|++++++| |++........+++|+.
T Consensus 32 ~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 32 TAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp EECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 366889999999999999999999 99999999888888874
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00099 Score=69.00 Aligned_cols=102 Identities=12% Similarity=-0.043 Sum_probs=70.7
Q ss_pred ccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------hCCCCCccccchhhhccCHHHHHHhhhc
Q 045750 434 TFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLA---IKICHE--------VGIRTTHVSTGPDLELLSQESFHERVKR 502 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a---~~ia~~--------~gi~~~~~~~g~~~~~~~~~~~~~~~~~ 502 (792)
..++++.|++.++++.|+++|+++.++||+....+ ....++ +|+....++.+.+...
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 251 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDT------------ 251 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCC------------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeeccCCCC------------
Confidence 34678999999999999999999999999985432 344444 7874333332221110
Q ss_pred ceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEec
Q 045750 503 ATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVD 552 (792)
Q Consensus 503 ~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~ 552 (792)
+-.|+-|..+.+.+.....+.++++||..+|+.|-++||+- |++.
T Consensus 252 -----kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~ 297 (301)
T 1ltq_A 252 -----RKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA 297 (301)
T ss_dssp -----SCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred -----cHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEec
Confidence 11256677777777544314468899999999999999985 4444
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00027 Score=66.86 Aligned_cols=101 Identities=15% Similarity=0.137 Sum_probs=64.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCCCCccc-cc----hhhhccCHHHH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGD---------------SLSLAIKICHEVGIRTTHVS-TG----PDLELLSQESF 496 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd---------------~~~~a~~ia~~~gi~~~~~~-~g----~~~~~~~~~~~ 496 (792)
-++.|++.++++.|+++|++++++|+. ....+..+.+++|+.-+.++ ++ .+....
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v~~s~~~~~~~~~~~----- 115 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCR----- 115 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSS-----
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEEEEcCCCCccccccc-----
Confidence 367899999999999999999999998 46677888889998632221 11 110000
Q ss_pred HHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCC
Q 045750 497 HERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSG 554 (792)
Q Consensus 497 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~ 554 (792)
+-.|+--..+.+.+.-.. +.+++|||+.+|+.+-++||+. |.+..+
T Consensus 116 -----------KP~p~~~~~~~~~~gi~~-~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 116 -----------KPKVKLVERYLAEQAMDR-ANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp -----------TTSCGGGGGGC----CCG-GGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred -----------CCCHHHHHHHHHHcCCCH-HHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 001111112223333333 5688999999999999999995 555443
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0023 Score=66.46 Aligned_cols=117 Identities=13% Similarity=0.066 Sum_probs=76.3
Q ss_pred cCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh----CCCCCccccchhhhcc-------C-HHHHHH----
Q 045750 435 FYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEV----GIRTTHVSTGPDLELL-------S-QESFHE---- 498 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~----gi~~~~~~~g~~~~~~-------~-~~~~~~---- 498 (792)
....+.|+.++.++.++++|++|+++||-+..-++.+|..+ ||+.++++.......- . ..+..+
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~ 219 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYD 219 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeecccccccccccccccccccc
Confidence 34467899999999999999999999999999999999984 7776665543211110 0 001110
Q ss_pred --hhhcceEEEE-----eChhhHHHHHHHHhhcCCCEEEEEcCC-cccHHHHHh--CCeeEEe
Q 045750 499 --RVKRATVLAR-----LTPTQKLRVVQSLQSVGKHVVGFLGDG-INDSLALDA--ANVGISV 551 (792)
Q Consensus 499 --~~~~~~v~~~-----~~p~~K~~iv~~l~~~~~~~v~~iGDg-~ND~~~l~~--A~vgia~ 551 (792)
.......-.+ +.-+.|...++..-..++..+++.||+ ..|.+||+. ++.|+++
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 220 PKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp GGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred ccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0001111112 123568777777665565778999999 579999965 4444444
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0024 Score=63.12 Aligned_cols=115 Identities=16% Similarity=0.151 Sum_probs=74.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
++.|++.++++.|+++| ++.++|+.....+....+++|+... +.+ .+... ..|..+
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~--f~~------------------~~~~~---~~K~~~ 151 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE--VEG------------------RVLIY---IHKELM 151 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH--TTT------------------CEEEE---SSGGGC
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh--cCe------------------eEEec---CChHHH
Confidence 67899999999999999 9999999999999999999987420 000 01111 122233
Q ss_pred HHHHhh-cCCCEEEEEcCCcc---cHHHHHhCCee-EEecCC----c-HHHHhh--cCEEeccCCchHHHHHH
Q 045750 518 VQSLQS-VGKHVVGFLGDGIN---DSLALDAANVG-ISVDSG----A-SVAKDL--ADIILLEKDLNVLVAGV 578 (792)
Q Consensus 518 v~~l~~-~~~~~v~~iGDg~N---D~~~l~~A~vg-ia~~~~----~-~~~~~~--ad~vl~~~~~~~i~~~i 578 (792)
.+.+.+ ...+.+++|||+.+ |+.+-++||+. |.+..+ . +..++. +|+++ +++..+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~l 222 (231)
T 2p11_A 152 LDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEMD 222 (231)
T ss_dssp HHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGCG
T ss_pred HHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHHH
Confidence 333322 22378999999999 66666778874 444332 2 234443 89887 4566554443
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0055 Score=60.77 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=32.7
Q ss_pred ChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 045750 440 KDSAKQALWRLAKKGVKAKLLT---GDSLSLAIKICHEVGIR 478 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~T---gd~~~~a~~ia~~~gi~ 478 (792)
-+...++++.+++.|++++++| |+..........++|+.
T Consensus 21 ~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 21 VPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp CTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 3444889999999999999999 88888888877778874
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0016 Score=63.79 Aligned_cols=93 Identities=15% Similarity=0.132 Sum_probs=60.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+... .+....+++|+.. +.++.+.+.. ..+-.|+--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 157 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIK----------------AVKPNPKIFG 157 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC---------------------------CCHHH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccC----------------CCCCCHHHHH
Confidence 4579999999999999999999999866 5788888999853 1222221110 0111222222
Q ss_pred HHHHHHhhcCCCEEEEEcCCcc-cHHHHHhCCeeEEe
Q 045750 516 RVVQSLQSVGKHVVGFLGDGIN-DSLALDAANVGISV 551 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~N-D~~~l~~A~vgia~ 551 (792)
.+. ++.+-.. ++|||+.+ |+.+-++||+....
T Consensus 158 ~~~---~~~~~~~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 158 FAL---AKVGYPA-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHH---HHHCSSE-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHH---HHcCCCe-EEEcCCchHhHHHHHHCCCeEEE
Confidence 333 3333234 89999999 99999999997553
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0017 Score=65.30 Aligned_cols=42 Identities=21% Similarity=0.188 Sum_probs=35.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDS---LSLAIKICHEVGIR 478 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~---~~~a~~ia~~~gi~ 478 (792)
.++.|++.++|+.|+++|+++.++||+. ...+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 3567999999999999999999999998 44555666788986
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.035 Score=55.42 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=33.4
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLT---GDSLSLAIKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~T---gd~~~~a~~ia~~~gi~ 478 (792)
.++.-+++.++++.+++.|++++++| |+.........+++|++
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 55666889999999999999999999 67776776666777874
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0076 Score=60.01 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=72.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|+++|+++.++|+... +..+-+.+|+.. +.++++.+... .+=.|+-=.
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~----------------~KP~p~~~~ 156 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKN----------------SKPDPEIFL 156 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSS----------------CTTSTHHHH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccC----------------CCCcHHHHH
Confidence 4679999999999999999999998754 455678888853 22333333221 111233344
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCcHHHHhhcCEEe
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGASVAKDLADIIL 566 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~~~~~~~ad~vl 566 (792)
...+.+.-.. +.+++|||+.+|+.+-++||+ .|+++.+. ..+|.++
T Consensus 157 ~a~~~lg~~p-~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~ 203 (243)
T 4g9b_A 157 AACAGLGVPP-QACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLL 203 (243)
T ss_dssp HHHHHHTSCG-GGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEE
T ss_pred HHHHHcCCCh-HHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhc
Confidence 5556665555 678899999999999999998 56665442 2356554
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.73 E-value=0.026 Score=56.80 Aligned_cols=111 Identities=13% Similarity=0.115 Sum_probs=73.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh---CCCC--CccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEV---GIRT--THVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~---gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
-++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+.. +.++++ +.. .+-.|
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-----------------~KP~p 190 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-----------------HKVES 190 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-----------------CTTCH
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-----------------CCCCH
Confidence 367899999999999999999999999998888777754 3532 112221 110 11112
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecC-C--c-HHHHhhcCEEe
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDS-G--A-SVAKDLADIIL 566 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~-~--~-~~~~~~ad~vl 566 (792)
+--..+.+.+.-.. +.+++|||+.+|+.+-++||+. |.+.. + . +.....+|.++
T Consensus 191 ~~~~~~~~~lg~~p-~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i 249 (261)
T 1yns_A 191 ESYRKIADSIGCST-NNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249 (261)
T ss_dssp HHHHHHHHHHTSCG-GGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred HHHHHHHHHhCcCc-ccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEE
Confidence 33344555555444 6788999999999999999985 44532 2 1 12224467766
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.027 Score=58.17 Aligned_cols=43 Identities=19% Similarity=0.138 Sum_probs=37.3
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLT---GDSLSLAIKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~T---gd~~~~a~~ia~~~gi~ 478 (792)
.+++-|++.+++++++++|++++++| |+.........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 68888887778888885
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=95.10 E-value=0.028 Score=62.97 Aligned_cols=98 Identities=15% Similarity=0.103 Sum_probs=63.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC------CHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGD------SLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd------~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
++.|++.++++.|+++|+++.++|+. ...........++-.-+.++++++.... +=.|
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~----------------KP~p 163 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV----------------KPEP 163 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCC----------------TTCH
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCC----------------CCCH
Confidence 67899999999999999999999996 3333332222222222333333332211 1123
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
+--..+.+.+.-.. +.+++|||+.||+.+.++||+....-
T Consensus 164 ~~~~~~~~~lg~~p-~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 164 QIYKFLLDTLKASP-SEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp HHHHHHHHHHTCCG-GGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHcCCCh-hHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 33445555555455 67889999999999999999976653
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=94.59 E-value=0.0093 Score=57.94 Aligned_cols=92 Identities=24% Similarity=0.220 Sum_probs=56.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH----HHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC----HEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia----~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
+.|++.+.++.|+++|+++.++|+.+...+..+. +.++.. ..+... ..+....|. .
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i----~~~~~~---------------~~~~~~KP~-p 148 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP----ATNMNP---------------VIFAGDKPG-Q 148 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC----TTTBCC---------------CEECCCCTT-C
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCcc----ccccch---------------hhhcCCCCC-H
Confidence 4789999999999999999999999754333322 223221 011000 011111221 1
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEec
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVD 552 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~ 552 (792)
..+.+.+++.+ - ++++||+.+|+.+-++||+. |.+.
T Consensus 149 ~~~~~~~~~~g-~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 149 NTKSQWLQDKN-I-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CCSHHHHHHTT-E-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHCC-C-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 12333444555 3 89999999999999999985 4453
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=94.30 E-value=0.051 Score=48.60 Aligned_cols=42 Identities=21% Similarity=0.182 Sum_probs=35.8
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCCCC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDS---LSLAIKICHEVGIRTT 480 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~---~~~a~~ia~~~gi~~~ 480 (792)
+.|++.++|++++++|++++++|||+ ...+....++.|+...
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~ 69 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFY 69 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCS
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeE
Confidence 45799999999999999999999998 5667777888888643
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.05 E-value=0.04 Score=59.55 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=34.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHhCCCC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDS------------LSLAIKICHEVGIRT 479 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~------------~~~a~~ia~~~gi~~ 479 (792)
+-|++.++++.|+++|++++++|+.+ ...+..+.+++|+.-
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~f 140 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPF 140 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCE
Confidence 67999999999999999999999966 223677888899853
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=93.37 E-value=0.0019 Score=61.92 Aligned_cols=80 Identities=13% Similarity=0.041 Sum_probs=56.9
Q ss_pred CCCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 437 DPPKDSAKQALWRLAKK-GVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~-Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
-++.|++.+++++|+++ |+++.++|+.....+..+.+++|+ -+.++++
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-f~~i~~~------------------------------ 120 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-VEQHLGP------------------------------ 120 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-HHHHHCH------------------------------
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-hhhhcCH------------------------------
Confidence 46789999999999999 999999999988877777777776 2111111
Q ss_pred HHHHHHhhcCCCEEEEEcCCccc----HHHHH-hCCee
Q 045750 516 RVVQSLQSVGKHVVGFLGDGIND----SLALD-AANVG 548 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND----~~~l~-~A~vg 548 (792)
+..+.+.-.. +.++++||+.+| +.+-+ .||+.
T Consensus 121 ~~~~~~~~~~-~~~~~vgDs~~dD~~~i~~A~~~aG~~ 157 (193)
T 2i7d_A 121 QFVERIILTR-DKTVVLGDLLIDDKDTVRGQEETPSWE 157 (193)
T ss_dssp HHHTTEEECS-CGGGBCCSEEEESSSCCCSSCSSCSSE
T ss_pred HHHHHcCCCc-ccEEEECCchhhCcHHHhhcccccccc
Confidence 1222222223 567899999999 66666 66663
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.04 E-value=0.081 Score=53.05 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=34.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----hCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE----VGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~----~gi~ 478 (792)
.++.-+++.++++.+++.|+++.++||+...+...++++ +|++
T Consensus 19 ~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 19 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 444558899999999999999999999987776666654 7774
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=91.55 E-value=0.25 Score=49.23 Aligned_cols=92 Identities=11% Similarity=0.032 Sum_probs=61.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh--C---------CCC--CccccchhhhccCHHHHHHhhhcce
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEV--G---------IRT--THVSTGPDLELLSQESFHERVKRAT 504 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~--g---------i~~--~~~~~g~~~~~~~~~~~~~~~~~~~ 504 (792)
++.|++.++++. |+++.++|+.+...+..+.+.+ | +.. ...++. .. .
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~------------~--- 184 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NT------------S--- 184 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HH------------H---
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee-ec------------c---
Confidence 568999999988 9999999999999888887776 4 211 000000 00 0
Q ss_pred EEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEe
Q 045750 505 VLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISV 551 (792)
Q Consensus 505 v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~ 551 (792)
-.+-.|+--..+.+.+.-.. +.+++|||+.+|+.+-++||+- |.+
T Consensus 185 -g~KP~p~~~~~a~~~lg~~p-~~~l~vgDs~~di~aA~~aG~~~i~v 230 (253)
T 2g80_A 185 -GKKTETQSYANILRDIGAKA-SEVLFLSDNPLELDAAAGVGIATGLA 230 (253)
T ss_dssp -CCTTCHHHHHHHHHHHTCCG-GGEEEEESCHHHHHHHHTTTCEEEEE
T ss_pred -CCCCCHHHHHHHHHHcCCCc-ccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 01112333344555555445 6788999999999999999985 444
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=89.18 E-value=1.3 Score=41.06 Aligned_cols=99 Identities=9% Similarity=-0.056 Sum_probs=59.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC---CHHH---HHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEe
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGD---SLSL---AIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARL 509 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd---~~~~---a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 509 (792)
++.|++.++++.|++. +++.++|+. +... ...+.+.+|... ..++++.+
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~---------------------- 125 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK---------------------- 125 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG----------------------
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc----------------------
Confidence 6789999999999985 999999998 3111 222334344321 12222211
Q ss_pred ChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 510 TPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 510 ~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.| .+ .+++|||+.+|+. ++|+-.|++..+... ...++.++ +++..+...+
T Consensus 126 ---~~---------l~--~~l~ieDs~~~i~--~aaG~~i~~~~~~~~-~~~~~~~i--~~~~el~~~l 175 (180)
T 3bwv_A 126 ---NI---------IL--ADYLIDDNPKQLE--IFEGKSIMFTASHNV-YEHRFERV--SGWRDVKNYF 175 (180)
T ss_dssp ---GG---------BC--CSEEEESCHHHHH--HCSSEEEEECCGGGT-TCCSSEEE--CSHHHHHHHH
T ss_pred ---Ce---------ec--ccEEecCCcchHH--HhCCCeEEeCCCccc-CCCCceec--CCHHHHHHHH
Confidence 11 13 3579999999985 567766666533221 13466666 5677766655
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.08 E-value=0.22 Score=47.39 Aligned_cols=90 Identities=11% Similarity=0.048 Sum_probs=62.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
-.+||++.+.++++++. +++++.|.-....|..+.+.+|+... .++.+++... .|
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~----------------------~k 123 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVF----------------------HR 123 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEE----------------------ET
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEccccee----------------------cC
Confidence 35799999999999998 99999999999999999999998641 1122221110 12
Q ss_pred HHHHHHHhhcC--CCEEEEEcCCcccHHHHHhCCeeE
Q 045750 515 LRVVQSLQSVG--KHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 515 ~~iv~~l~~~~--~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
...++.++..| ...|++++|..++..+-..|++-|
T Consensus 124 ~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 124 GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEE
Confidence 22223333322 156889999999998766666554
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=87.57 E-value=0.24 Score=46.43 Aligned_cols=89 Identities=12% Similarity=0.067 Sum_probs=61.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
.+||++.+.++++++. +++++.|.-....|..+.+.+|.... ..+.+++... .|.
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~----------------------~k~ 111 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF----------------------HRG 111 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEE----------------------ETT
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCcee----------------------cCC
Confidence 5799999999999998 99999999999999999999998631 1122211110 111
Q ss_pred HHHHHHhhcC--CCEEEEEcCCcccHHHHHhCCeeE
Q 045750 516 RVVQSLQSVG--KHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 516 ~iv~~l~~~~--~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
..++.++..| ...|+++||..+|..+=..+++-|
T Consensus 112 ~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 112 NYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 1222222222 156889999999998766666654
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=87.12 E-value=3.3 Score=40.98 Aligned_cols=119 Identities=16% Similarity=0.149 Sum_probs=62.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccc-hhhhccCHHHHHHhhhcceEEEEeChh--h
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTG-PDLELLSQESFHERVKRATVLARLTPT--Q 513 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g-~~~~~~~~~~~~~~~~~~~v~~~~~p~--~ 513 (792)
..+-|++.++++.|+ +|+++ ++|+....... . ...+.+ ..+. +.++.......+ ....|. -
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~--------~-~~~l~~~~~l~----~~~~~~~~~~~~-~~~KP~~~~ 192 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPG--------E-EGIYPGAGSII----AALKVATNVEPI-IIGKPNEPM 192 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEE--------T-TEEEECHHHHH----HHHHHHHCCCCE-ECSTTSHHH
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccC--------C-CCCcCCcHHHH----HHHHHHhCCCcc-EecCCCHHH
Confidence 456789999999999 89998 77876432110 0 000111 0000 011111111111 112232 1
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCee-EEecCC--c-HHHHh---hcCEEeccCCchHHHH
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVG-ISVDSG--A-SVAKD---LADIILLEKDLNVLVA 576 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vg-ia~~~~--~-~~~~~---~ad~vl~~~~~~~i~~ 576 (792)
-..+.+. ...+.++||||+. +|+.+-++||+. +.+..+ . +...+ .+|+++ +++..+.+
T Consensus 193 ~~~~~~~---~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~--~~l~el~~ 258 (263)
T 1zjj_A 193 YEVVREM---FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVL--PSVYELID 258 (263)
T ss_dssp HHHHHHH---STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEE--SSGGGGGG
T ss_pred HHHHHHh---CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEE--CCHHHHHH
Confidence 1222222 3337899999995 999999999985 556432 2 23332 578887 45655543
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=82.95 E-value=1.7 Score=37.69 Aligned_cols=29 Identities=14% Similarity=0.205 Sum_probs=26.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLS 466 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~ 466 (792)
++.+++.+++++++++|++++++|||...
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 56789999999999999999999999864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 792 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-26 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-23 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 5e-23 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-19 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 9e-19 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 7e-14 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 7e-08 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-08 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 0.001 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 0.002 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.002 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 103 bits (257), Expect = 4e-26
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 423 IESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV 482
I SD DPP+ ++ G++ ++TGD+ AI IC +GI +
Sbjct: 5 ICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENE 64
Query: 483 S------TGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGI 536
TG + + L E +RA AR+ P+ K ++V+ LQS + GDG+
Sbjct: 65 EVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITA-MTGDGV 123
Query: 537 NDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERG 581
ND+ AL A +GI++ SG +VAK ++++L + + + +VA VE G
Sbjct: 124 NDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 101 bits (251), Expect = 2e-23
Identities = 41/370 (11%), Positives = 85/370 (22%), Gaps = 63/370 (17%)
Query: 231 VVKSLGAIRDMGTMDILCIDKTGTLTMDR--------AIMVNHLDSWGFPKE-NVLRFAF 281
V + L +G + + + ++N L S G ++L F
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 282 L--NSYYKTDQKYPLDDAILAYVYTNGYRFQAS--KWKKLDEIPFDFVRRKVSVILETES 337
+ +A + + Q + + + + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGK- 144
Query: 338 ITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEG 397
+ + + A E+ + + L+ E
Sbjct: 145 --------NNIYAALEEFATTELHV----------------SDATLFSLKGALWTLAQEV 180
Query: 398 LRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDP--PKDSAKQALWRLAKKGV 455
+ + K + I G I P D K L L G
Sbjct: 181 YQEWYLGSKLY--------EDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGF 232
Query: 456 KAKLLTGDSLSLAIKICHEVGIR----TTHVSTGPDLELLSQESFHER---------VKR 502
+ + TG + + +G+ ++T D+ R
Sbjct: 233 ELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292
Query: 503 ATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGASVAKDL 561
A + Q V +GD + D L+ I +G
Sbjct: 293 ALYGNNRDKYESYINKQDNIVNKDDVF-IVGDSLADLLSAQKIGATFIGTLTGLKGKDAA 351
Query: 562 ADIILLEKDL 571
++ D
Sbjct: 352 GELEAHHADY 361
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 96.5 bits (239), Expect = 5e-23
Identities = 40/220 (18%), Positives = 78/220 (35%), Gaps = 20/220 (9%)
Query: 220 KGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVL-R 278
+G + + ++ T+ LC D + + + G E L
Sbjct: 32 EGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKV----GEATETALTT 87
Query: 279 FAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESI 338
+ + T+ + L A + R KK + F R+ +SV
Sbjct: 88 LVEKMNVFNTEVR-NLSKVERANACNSVIRQL---MKKEFTLEFSRDRKSMSVYCSPA-- 141
Query: 339 TEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEEL--SNE 396
S G + KGA E VI C++V T +++IL++ +E +
Sbjct: 142 --KSSRAAVGNKMFVKGAPEGVIDRCNYV--RVGTTRVPMTGPVKEKILSVIKEWGTGRD 197
Query: 397 GLRVIGVAVKRLLPQKSAQSNRNDGP---IESDMVFLGLI 433
LR + +A + P++ + E+D+ F+G++
Sbjct: 198 TLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVV 237
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 83.6 bits (206), Expect = 1e-19
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 27/157 (17%)
Query: 423 IESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV 482
+ D D K+SAK A+ L + G+K ++TGD+ A I E+ +
Sbjct: 6 VIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA 65
Query: 483 STGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLAL 542
P QK V+ LQ+ K VV F+GDGIND+ AL
Sbjct: 66 EV-------------------------LPHQKSEEVKKLQA--KEVVAFVGDGINDAPAL 98
Query: 543 DAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579
A++GI+V SG+ VA + DI+L+ DL +VA ++
Sbjct: 99 AQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 82.1 bits (202), Expect = 2e-19
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 35 KVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH--LVVSQSSLTG 92
KV R + VQ ++ RD+VPGDIV GD P D+R+L+ K L V QS LTG
Sbjct: 4 KVYRADRKSVQ-----RIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTG 58
Query: 93 ESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTI 149
ES + K + D D KN+ F GTN+ +G G+V +TG T + +
Sbjct: 59 ESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 83.4 bits (205), Expect = 9e-19
Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 15/154 (9%)
Query: 293 PLDDAILAYVYTNGYRFQA--SKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRF 350
+ A+L + + + + K+ EI F+ + I E E
Sbjct: 67 ASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHERED-------NPQSHV 119
Query: 351 VITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLP 410
++ KGA E ++ CS + + G E Q N EL G RV+G L
Sbjct: 120 LVMKGAPERILDRCSSI--LVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPS 177
Query: 411 QKSAQSNRNDGP----IESDMVFLGLITFYDPPK 440
K + + D + F+GL++ D
Sbjct: 178 GKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHH 211
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 72.4 bits (177), Expect = 7e-14
Identities = 34/240 (14%), Positives = 79/240 (32%), Gaps = 35/240 (14%)
Query: 579 ERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLY-SVGQIAI 637
GR + N ++I+ I +N+G V+ + + + L P QLL N + + A+
Sbjct: 226 TLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATAL 285
Query: 638 PWDKMEGDYVKT-PQIWSE----NGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMN- 691
++ + D + P+ E L + G V A + + Y E +
Sbjct: 286 GFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTY 345
Query: 692 -------------------------VVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE-- 724
+ + ++ +E ++
Sbjct: 346 HQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPP 405
Query: 725 VASWPVLSSTLVISAIGIAIPFT-AIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRI 783
+ +L S + ++ I + + + L LT + +L + + + +++K I
Sbjct: 406 WVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 465
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 53.1 bits (127), Expect = 7e-08
Identities = 15/101 (14%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Query: 167 FVLICVMLIVATIIILIDYFTS-----KNLSESILFGISVACALTPQMFPLIVNTSLAKG 221
+ + + + I + + +++A A P+ P ++ T LA G
Sbjct: 148 VISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 207
Query: 222 ALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIM 262
MA+ +V+SL ++ +G + + + +
Sbjct: 208 TRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVG 248
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 52.7 bits (125), Expect = 4e-08
Identities = 12/150 (8%), Positives = 47/150 (31%), Gaps = 2/150 (1%)
Query: 433 ITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLS 492
+ ++ ++ + + + + +++G + + + +
Sbjct: 70 VLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDN-D 128
Query: 493 QESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552
+ K V+ L ++++ +GD + D A +++ + D
Sbjct: 129 YIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYII-MIGDSVTDVEAAKLSDLCFARD 187
Query: 553 SGASVAKDLADIILLEKDLNVLVAGVERGR 582
+ ++ L +D + +E +
Sbjct: 188 YLLNECREQNLNHLPYQDFYEIRKEIENVK 217
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.1 bits (90), Expect = 0.001
Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 5/144 (3%)
Query: 427 MVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGP 486
V + ++ + RL ++ V+ L++G S+ + ++ I T+V
Sbjct: 71 QVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNV-FAN 129
Query: 487 DLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAAN 546
L+ + + + +++++ K + +GDG D A A+
Sbjct: 130 RLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKII--MIGDGATDMEACPPAD 187
Query: 547 VGISV--DSGASVAKDLADIILLE 568
I + KD A + +
Sbjct: 188 AFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.3 bits (88), Expect = 0.002
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 531 FLGDGINDSLALDAANVGISVDSGASVAKDLADIILLE 568
GD ND+ L A+ GI + +V ++ +
Sbjct: 150 AAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 38.1 bits (87), Expect = 0.002
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 529 VGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFG 586
V +GDG ND A ++V + K+ AD + ++ + FG
Sbjct: 171 VAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHILEKFG 228
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 792 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.93 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.9 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.88 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.88 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.74 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.41 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.39 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.37 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.33 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.32 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.25 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.24 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.21 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.21 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.11 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.08 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.02 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.99 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.99 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.94 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.93 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.87 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.5 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.41 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.41 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.88 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.86 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.82 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.8 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.8 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.77 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.46 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.4 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.39 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.28 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.19 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.11 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.99 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 96.98 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.97 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.94 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.75 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.65 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.56 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.32 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.32 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.3 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.16 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.04 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.85 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.8 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 95.7 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 95.65 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 94.93 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.87 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 94.28 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 91.16 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 84.65 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 81.17 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=8.4e-31 Score=244.45 Aligned_cols=144 Identities=33% Similarity=0.605 Sum_probs=138.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC------CccccchhhhccCHHHHHHhhhcceEEEEeC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT------THVSTGPDLELLSQESFHERVKRATVLARLT 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~------~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 510 (792)
|||||+++++|+.||++||+++|+|||+..+|.++|+++||.. ...++|.++......+..+...+..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 9999999999999999999999999999999999999999943 3467889999999999999999999999999
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 511 PTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 511 p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
|++|..+++.+|+.| ++|+|+|||.||++||++||+||+++++++.++++||+++.++++..|.++|++|
T Consensus 99 p~~K~~lv~~l~~~g-~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYD-EITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTT-CCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcc-cceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999997
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=1.4e-27 Score=213.01 Aligned_cols=125 Identities=39% Similarity=0.531 Sum_probs=110.0
Q ss_pred EEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEE
Q 045750 428 VFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 428 ~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
+..+.++++|++||+++++|+.|+++|++++|+|||+..++.++|+++||+. +|+
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~-------------------------v~~ 65 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------------VIA 65 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------------EEC
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh-------------------------hcc
Confidence 3456789999999999999999999999999999999999999999999965 999
Q ss_pred EeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 508 RLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
+++|++|..+++.+|+. ++|+|+|||.||+|||++||+||+|+++++.++++||++++++++..|+++|+
T Consensus 66 ~~~p~~k~~~v~~~q~~--~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 66 EVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp SCCHHHHHHHHHHHTTT--SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred ccchhHHHHHHHHHHcC--CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 99999999999999875 57999999999999999999999999999999999999999999999998874
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=1.2e-26 Score=199.26 Aligned_cols=109 Identities=38% Similarity=0.496 Sum_probs=98.2
Q ss_pred CeEEEecCCccccCCeE--EEEecCCCCCCcEEEECCCCeecccEEEEEe--CCeEEEeccccCCCcccccccccccCCC
Q 045750 33 PIKVQRCAGRVVQSELI--VQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS--KHLVVSQSSLTGESWTAEKTADIREDHC 108 (792)
Q Consensus 33 ~~~v~r~~~~~~~~g~~--~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~--~~~~Vdes~ltGEs~p~~k~~~~~~~~~ 108 (792)
.++|+| +|++ ++|+++||+|||+|.+++||+|||||+|+++ .++.||||+|||||.|+.|.+.+..+..
T Consensus 2 ~~kV~R-------~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~ 74 (115)
T d1wpga1 2 MGKVYR-------ADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPR 74 (115)
T ss_dssp EEEEEB-------SSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTT
T ss_pred ceEEEE-------CCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeecccccccc
Confidence 467888 7764 7899999999999999999999999999874 4489999999999999999988776667
Q ss_pred CCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhh
Q 045750 109 TPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFST 148 (792)
Q Consensus 109 ~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~ 148 (792)
....+..|++|+||.+.+|+++++|++||.+|.+|++.+.
T Consensus 75 ~~~~~~~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~ 114 (115)
T d1wpga1 75 AVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 114 (115)
T ss_dssp CCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHH
T ss_pred cccccccceEEeccEEEeeeEEEEEEEEccccHHHHHHHh
Confidence 7777889999999999999999999999999999998865
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=1.4e-23 Score=231.24 Aligned_cols=218 Identities=16% Similarity=0.179 Sum_probs=175.7
Q ss_pred CCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCcccc
Q 045750 569 KDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYV 647 (792)
Q Consensus 569 ~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m 647 (792)
.++.++-. .||.++.|++|++.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|++++++|++|+++|
T Consensus 219 r~L~avE~---~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM 295 (472)
T d1wpga4 219 RSLPSVET---LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM 295 (472)
T ss_dssp SCTTHHHH---HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGG
T ss_pred hhHHHHHH---HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhh
Confidence 35554433 5999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred CCCCCCCCCCc-c----hhhhhhhhHHHHHHHHHHHHHHHHhhhc--------------------------ccchHHHHH
Q 045750 648 KTPQIWSENGL-P----MFILFNGPVCILCDVTALFFLWFYYEAY--------------------------NQMNVVFFR 696 (792)
Q Consensus 648 ~~p~~~~~~~l-~----~~~~~~g~~~a~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~ 696 (792)
++|||++...+ . ..+++.|.+.+...+..+++.+++.... ......+++
T Consensus 296 ~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 375 (472)
T d1wpga4 296 DRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPM 375 (472)
T ss_dssp GSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHH
T ss_pred cCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHH
Confidence 99887654333 2 2333444444433333333222211100 001245789
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccc--ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHHHH
Q 045750 697 SAWFVEGLLMQTLIIHLIRTEKIPFIQ--EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFIGY 773 (792)
Q Consensus 697 t~~f~~lv~~q~~~~~~~r~~~~~~~~--~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~~~ 773 (792)
|++|.+++++|+++.+++|+++.++++ .+.|+++++++++.+++++++.|+| ++.+|++.|+++.+|++++++++..
T Consensus 376 T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~ 455 (472)
T d1wpga4 376 TMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPV 455 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999888765 3688989999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc
Q 045750 774 FTVGQLVKRIYILIYK 789 (792)
Q Consensus 774 l~~~e~iK~~~~~~~~ 789 (792)
++++|++|++.||+.+
T Consensus 456 ~~~~El~K~~~R~~~~ 471 (472)
T d1wpga4 456 IGLDEILKFIARNYLE 471 (472)
T ss_dssp HHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHhhcCCC
Confidence 9999999999887765
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.88 E-value=1.6e-27 Score=255.55 Aligned_cols=308 Identities=12% Similarity=0.001 Sum_probs=207.1
Q ss_pred chhhhcccceeEEEeccccccccCceEEEEeeCC--------CCCCcH-HHHHHH-Hh-hccccCCCCCchHHHHHHHHH
Q 045750 235 LGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDS--------WGFPKE-NVLRFA-FL-NSYYKTDQKYPLDDAILAYVY 303 (792)
Q Consensus 235 ~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~--------~~~~~~-~~l~~a-~~-~~~~~~~~~~p~~~al~~~~~ 303 (792)
..+.|.||...++|+|||||+|.|+|.+..+... .+.+.+ ++.... .+ .+......++|.+.+++...+
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDE 109 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSS
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHh
Confidence 4566999999999999999999999987554322 122222 121111 11 122234556777777776543
Q ss_pred hcCcc--cccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHH
Q 045750 304 TNGYR--FQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSE 381 (792)
Q Consensus 304 ~~~~~--~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~ 381 (792)
..+.. .....+....++||++.+|+|++..... .. .+..+.+|+++.+. +++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~--~~-------~~~~~~~~a~~~~~----------------~~~~ 164 (380)
T d1qyia_ 110 PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGK--NN-------IYAALEEFATTELH----------------VSDA 164 (380)
T ss_dssp CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSH--HH-------HHHHHHHHHHHHTT----------------CSCC
T ss_pred hccchHHHHHHhccccccCCcchHHHHHhhhcccc--cc-------hhHhhhhccHhhcC----------------CcHH
Confidence 22211 1345667778899999999987655432 11 22333345544431 1122
Q ss_pred HHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCC--hhHHHHHHHHHhCCCeEEE
Q 045750 382 EQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPK--DSAKQALWRLAKKGVKAKL 459 (792)
Q Consensus 382 ~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r--~~~~~~I~~l~~~Gi~v~~ 459 (792)
.+..+.+...+++.+|+|++++|++.....+.. ...+....|++..++++| +++++++++|+++|++++|
T Consensus 165 ~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~--------~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i 236 (380)
T d1qyia_ 165 TLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKK--------IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGI 236 (380)
T ss_dssp GGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCS--------CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhhhcccccccc--------cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEE
Confidence 233445566789999999999998765422111 112223458899999855 5999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCC----CccccchhhhccCHHHH---------HHhhhcceEEEEeChhhHHHHHHHHhhcCC
Q 045750 460 LTGDSLSLAIKICHEVGIRT----THVSTGPDLELLSQESF---------HERVKRATVLARLTPTQKLRVVQSLQSVGK 526 (792)
Q Consensus 460 ~Tgd~~~~a~~ia~~~gi~~----~~~~~g~~~~~~~~~~~---------~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~ 526 (792)
+|||+..++..+++++|+.. ..++++.+......... ...+.....+++.+|.+|..+++.++..+
T Consensus 237 ~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~- 315 (380)
T d1qyia_ 237 ATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNK- 315 (380)
T ss_dssp ECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCT-
T ss_pred ECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCC-
Confidence 99999999999999999953 34555554322111000 01122334678899999999999999998
Q ss_pred CEEEEEcCCcccHHHHHhCC---eeEEec-CCcHHHHh----hcCEEeccCCchHHHHHH
Q 045750 527 HVVGFLGDGINDSLALDAAN---VGISVD-SGASVAKD----LADIILLEKDLNVLVAGV 578 (792)
Q Consensus 527 ~~v~~iGDg~ND~~~l~~A~---vgia~~-~~~~~~~~----~ad~vl~~~~~~~i~~~i 578 (792)
+.|+|+|||.||++|.++|| +||+|| .+++..++ .||+++ +++..+.+.+
T Consensus 316 ~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 316 DDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 88999999999999999999 999999 55554443 799999 6677775554
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.88 E-value=1.8e-22 Score=197.62 Aligned_cols=144 Identities=22% Similarity=0.264 Sum_probs=117.6
Q ss_pred CCCchHHHHHHHHHhcCccc--ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccc
Q 045750 290 QKYPLDDAILAYVYTNGYRF--QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFV 367 (792)
Q Consensus 290 ~~~p~~~al~~~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~ 367 (792)
.|+|.|.|++.++...|... .+..++.+.++||+|+||+|+++++.+..++ .+++|+|||||.|+++|+.+
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~-------~~~~~~KGApe~Il~~C~~~ 136 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQ-------SHVLVMKGAPERILDRCSSI 136 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTT-------SEEEEEEECHHHHHHTEEEE
T ss_pred ccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCC-------ceeEEecCCHHHHHHhhhhe
Confidence 68999999999998766544 4578899999999999999999998754333 68899999999999999998
Q ss_pred cccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccC----CCCCCCCCCCcEEEEecccCCCCChh
Q 045750 368 EHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQS----NRNDGPIESDMVFLGLITFYDPPKDS 442 (792)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~i~~~d~~r~~ 442 (792)
..+|...+++++.++.+.+..++|+.+|+||+++|||.++.++.... ....+..|+||+|+|++++.||||++
T Consensus 137 --~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 137 --LVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp --EETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred --eeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 56889999999999999999999999999999999999987643322 22345568999999999999999974
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.74 E-value=8.3e-19 Score=174.46 Aligned_cols=178 Identities=17% Similarity=0.174 Sum_probs=129.6
Q ss_pred eccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccc--c--------CCCCCchHHHHHHHHHhcCcccc--------
Q 045750 249 IDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYY--K--------TDQKYPLDDAILAYVYTNGYRFQ-------- 310 (792)
Q Consensus 249 ~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~--~--------~~~~~p~~~al~~~~~~~~~~~~-------- 310 (792)
++..|+++.+...+. .......++++..+++++.. . ...++|.|.|++.++.+.|....
T Consensus 29 y~p~G~i~~~~~~v~---~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~ 105 (239)
T d1wpga3 29 YAPEGEVLKNDKPIR---SGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKV 105 (239)
T ss_dssp SSSCCCEEETTEECC---GGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHH
T ss_pred eCCceEEEECCcCcC---ccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchh
Confidence 366778877664331 11111223455555443321 1 12489999999999988776542
Q ss_pred ----------cccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCH
Q 045750 311 ----------ASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTS 380 (792)
Q Consensus 311 ----------~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~ 380 (792)
+..|+.+.++||+|+||+|+++++.+..+. ....+.+|+|||||.|+++|+.+ ..++...++++
T Consensus 106 ~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~----~~~~~~l~vKGApe~iL~~C~~~--~~~~~~~~l~~ 179 (239)
T d1wpga3 106 ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR----AAVGNKMFVKGAPEGVIDRCNYV--RVGTTRVPMTG 179 (239)
T ss_dssp HHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGG----GGGCSEEEEEECHHHHHHTEEEE--EETTEEEECCH
T ss_pred hhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCc----ccceeEEEEeCChHHHHHhccce--ecCCceeeCCH
Confidence 357889999999999999999998753211 11147899999999999999988 46788889999
Q ss_pred HHHHHHHHHHHHH--hhccCeeEEEEEEecCCCccccCCC---CCCCCCCCcEEEEeccc
Q 045750 381 EEQKRILNLGEEL--SNEGLRVIGVAVKRLLPQKSAQSNR---NDGPIESDMVFLGLITF 435 (792)
Q Consensus 381 ~~~~~~~~~~~~~--~~~g~rvl~~a~~~~~~~~~~~~~~---~~~~~e~~l~~lG~i~~ 435 (792)
+.++.+.+..+++ +.+|+||+++|||+++++....... ..+.+|+||+|+|++++
T Consensus 180 ~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 180 PVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp HHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 9999999999987 6799999999999998654332221 12457899999999985
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.41 E-value=6.2e-13 Score=131.02 Aligned_cols=145 Identities=17% Similarity=0.178 Sum_probs=106.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccc-cchhhh---------------------------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVS-TGPDLE--------------------------- 489 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~-~g~~~~--------------------------- 489 (792)
.+.+.+.++|++++++|++++++|||+...+..+++.+++....+. .|..+.
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 5789999999999999999999999999999999999998432111 111000
Q ss_pred -------------------ccCHHHHHHhhh----c-------ceEEEEeChhhHHHHHHHHhhcC---CCEEEEEcCCc
Q 045750 490 -------------------LLSQESFHERVK----R-------ATVLARLTPTQKLRVVQSLQSVG---KHVVGFLGDGI 536 (792)
Q Consensus 490 -------------------~~~~~~~~~~~~----~-------~~v~~~~~p~~K~~iv~~l~~~~---~~~v~~iGDg~ 536 (792)
....+.+.+... . ..+-.......|...++.+.++. .+.++++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 001111222111 1 11112223457777777765542 25689999999
Q ss_pred ccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhH
Q 045750 537 NDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGR 582 (792)
Q Consensus 537 ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR 582 (792)
||++|++.||+||||+|+++.+|+.||+|+.+++.+++.+++++.-
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987653
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.39 E-value=1.5e-12 Score=127.94 Aligned_cols=145 Identities=14% Similarity=0.106 Sum_probs=106.2
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcccc-chhhh--------cc---------------
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVST-GPDLE--------LL--------------- 491 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~-g~~~~--------~~--------------- 491 (792)
+.++.+++.+++++|++.|++++++|||+...+..+++.+|+....+.. |.... ..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999999985432211 11000 00
Q ss_pred --------------------CHH---HHHHhhh--cceEE-----EE--eChhhHHHHHHHHhhcC---CCEEEEEcCCc
Q 045750 492 --------------------SQE---SFHERVK--RATVL-----AR--LTPTQKLRVVQSLQSVG---KHVVGFLGDGI 536 (792)
Q Consensus 492 --------------------~~~---~~~~~~~--~~~v~-----~~--~~p~~K~~iv~~l~~~~---~~~v~~iGDg~ 536 (792)
..+ ....... ...++ .. .....|...++.+.++. .+.|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 000 1111110 11121 12 22357888888776542 15588999999
Q ss_pred ccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 537 NDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 537 ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
||.+|++.||+||||+|+.+.+|+.||+|+..++..+|.+++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999875
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.37 E-value=1.3e-12 Score=133.36 Aligned_cols=68 Identities=22% Similarity=0.303 Sum_probs=61.1
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++.+ +.|+++|||.||.+||+.|+.|+||+|+++.+++.||+++.+++.++|.++|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 79888888877532 568999999999999999999999999999999999999999899999998864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.33 E-value=1e-12 Score=133.10 Aligned_cols=69 Identities=17% Similarity=0.129 Sum_probs=60.7
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 512 TQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 512 ~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.+|...++.+.++- .+.|+++|||.||.+||+.|+.|+||+|+.+.+|+.||+|+.+++.++|.+.|++
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~ 260 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQA 260 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 35888888887642 1468899999999999999999999999999999999999999999999988863
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.32 E-value=2e-12 Score=131.05 Aligned_cols=68 Identities=25% Similarity=0.300 Sum_probs=60.6
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
+|...++.+.++- ...++++|||.||.+||+.|+.|+||+|+.+++|+.||+|+.+++-+++.+++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~ 267 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEK 267 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHH
Confidence 6988888887752 2468899999999999999999999999999999999999999889999998863
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.25 E-value=2.9e-12 Score=128.92 Aligned_cols=69 Identities=19% Similarity=0.188 Sum_probs=61.1
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 512 TQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 512 ~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
..|...++.+.++- ...++++|||.||++||+.||.|+||+||.+.+|+.||+|+.+++.++|.++|++
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 36888888876641 2568899999999999999999999999999999999999999999999999975
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.24 E-value=1.5e-11 Score=114.26 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=84.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 445 QALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 445 ~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
.+|+.+++.|+.+.++||+....+...++++++.. ++ ....+|...++.+.++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-------------------------~~--~~~~~K~~~l~~~~~~ 91 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------------FF--LGKLEKETACFDLMKQ 91 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------------EE--ESCSCHHHHHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-------------------------cc--cccccHHHHHHHHHHH
Confidence 47999999999999999999999999999999853 22 3344565555544432
Q ss_pred ---CCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH
Q 045750 525 ---GKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV 573 (792)
Q Consensus 525 ---~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~ 573 (792)
..+.|+++||+.||.+||+.|++|+||+++.+.+|+.||+|+.++.-.+
T Consensus 92 ~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 92 AGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTT
T ss_pred hcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCc
Confidence 1277999999999999999999999999999999999999998776444
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.21 E-value=2e-11 Score=123.20 Aligned_cols=67 Identities=19% Similarity=0.285 Sum_probs=59.0
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.|...++.+.++- ...|+++|||.||.+||+.||+||||+|+++.+|+.||+|+.+++.+++.++|+
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 6888777776541 145889999999999999999999999999999999999999999999999885
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.21 E-value=1e-11 Score=126.46 Aligned_cols=67 Identities=19% Similarity=0.136 Sum_probs=54.1
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccC-CchHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEK-DLNVLVAGVE 579 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~-~~~~i~~~i~ 579 (792)
.|...++.+.+.- ...|+++|||.||.+||+.||+|+||+|+.+.+|+.||+|+.++ +..++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 5666666665542 15789999999999999999999999999999999999999755 4455766664
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=1e-10 Score=113.68 Aligned_cols=124 Identities=19% Similarity=0.209 Sum_probs=93.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEE--E----eCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA--R----LTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~--~----~~p 511 (792)
+++|++.++|+.||++|++++++||.....+..+++.+|++...++... +....+ ..... . ..+
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~-~~~~~~---------G~~~g~~~~~p~~~~ 151 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR-LKFYFN---------GEYAGFDETQPTAES 151 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEEC-EEECTT---------SCEEEECTTSGGGST
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeee-eeeeeh---------hccccceeeeeeecc
Confidence 4689999999999999999999999999999999999999754332211 000000 00000 0 235
Q ss_pred hhHHHHHHHHhhc-CCCEEEEEcCCcccHHHHHhCCeeEEecC--CcHHHHhhcCEEeccCCchH
Q 045750 512 TQKLRVVQSLQSV-GKHVVGFLGDGINDSLALDAANVGISVDS--GASVAKDLADIILLEKDLNV 573 (792)
Q Consensus 512 ~~K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~A~vgia~~~--~~~~~~~~ad~vl~~~~~~~ 573 (792)
..|.++++.+++. +.+.++++|||.||++|++.||++||++. .....++.+|+++ ++|..
T Consensus 152 ~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i--~~f~e 214 (217)
T d1nnla_ 152 GGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVE 214 (217)
T ss_dssp THHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGG
T ss_pred chHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEe--CCHHH
Confidence 6799999998764 22578999999999999999999999973 4567788899988 45654
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.08 E-value=9.6e-12 Score=135.70 Aligned_cols=74 Identities=19% Similarity=0.294 Sum_probs=68.0
Q ss_pred cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcccceeEEEeccc--cccccCceEE
Q 045750 189 KNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMDILCIDKT--GTLTMDRAIM 262 (792)
Q Consensus 189 ~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg~v~~i~~DKT--GTLT~~~~~v 262 (792)
..+.+.+..+++++++++|++||++++++++.|++||+|+|++||+..++|++|+..+.|+||| +|||.|.+.+
T Consensus 175 ~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 175 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp SCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence 4566788899999999999999999999999999999999999999999999999999999998 8999775443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.02 E-value=3e-10 Score=109.43 Aligned_cols=129 Identities=19% Similarity=0.228 Sum_probs=93.3
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccc--cchhhhccCHHHHHHhhhcceEEEE--eCh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVS--TGPDLELLSQESFHERVKRATVLAR--LTP 511 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~--~g~~~~~~~~~~~~~~~~~~~v~~~--~~p 511 (792)
..++.+++.+.++.++..|..++++||.....+....++.+....... ....... ...... ..+
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 140 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL------------TGDVEGEVLKE 140 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE------------EEEEECSSCST
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccc------------ccccccccccc
Confidence 457788999999999999999999999999999999999988531100 0000000 000000 012
Q ss_pred hhHHHHHH----HHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 512 TQKLRVVQ----SLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 512 ~~K~~iv~----~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
..|....+ .++... ..++++|||.||++|++.||+|||| |+.+..++.||+|+.++|+++|.++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~-~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 141 NAKGEILEKIAKIEGINL-EDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp THHHHHHHHHHHHHTCCG-GGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccchhhhHHHHhcccc-cceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 23333333 333334 5688999999999999999999999 89999999999999988999887654
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.99 E-value=7.8e-10 Score=109.51 Aligned_cols=141 Identities=16% Similarity=0.085 Sum_probs=98.2
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-cc--ccchhhhc---------------cCH---------
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT-HV--STGPDLEL---------------LSQ--------- 493 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~-~~--~~g~~~~~---------------~~~--------- 493 (792)
++..+++.++++.|+.++++|||+...+..+.+++++... .+ -.|..+.. ...
T Consensus 21 ~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T d1s2oa1 21 LEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhh
Confidence 3455667777899999999999999999999999998432 11 11111000 000
Q ss_pred ------------------------------HHHHHhhhc----c--------eEEEEeChhhHHHHHHHHhhcCC---CE
Q 045750 494 ------------------------------ESFHERVKR----A--------TVLARLTPTQKLRVVQSLQSVGK---HV 528 (792)
Q Consensus 494 ------------------------------~~~~~~~~~----~--------~v~~~~~p~~K~~iv~~l~~~~~---~~ 528 (792)
+++.+.... . .+-..-....|...++.+.+..+ ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~ 180 (244)
T d1s2oa1 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred cccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhh
Confidence 001111100 0 11112234579998888887632 45
Q ss_pred EEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC-------EEeccCCchHHHHHHHHh
Q 045750 529 VGFLGDGINDSLALDAANVGISVDSGASVAKDLAD-------IILLEKDLNVLVAGVERG 581 (792)
Q Consensus 529 v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad-------~vl~~~~~~~i~~~i~~g 581 (792)
++++|||.||.+||+.||.|++|+|+.+.+|+.|| ++...++..+|.+++++=
T Consensus 181 ~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f 240 (244)
T d1s2oa1 181 TLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 240 (244)
T ss_dssp EEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred EEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHHh
Confidence 88999999999999999999999999999999988 677777888999988763
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.99 E-value=6.8e-10 Score=109.71 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=39.4
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
.+...+.++++|++++++|++++++|||+...+..+.+++|+.
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4555678999999999999999999999999999999999994
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.94 E-value=7.3e-10 Score=108.30 Aligned_cols=139 Identities=9% Similarity=0.040 Sum_probs=100.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc-----cccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH-----VSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~-----~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
+++|++.+.++.|++.|++++++|+.....+..+.+++|+.... ...+........ ...........|+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~------~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWP------HSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECT------TCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccc------cccccccccCCHH
Confidence 46899999999999999999999999999999999999985321 111111000000 0000122345788
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHH
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRV 583 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~ 583 (792)
.|..+++.++..+ +.|+++||+.||++|+++||+++|++...+.+++..--...-++|+.|...+++-..
T Consensus 149 ~~~~~~~~~~~~~-~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 218 (226)
T d2feaa1 149 CKPSVIHELSEPN-QYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKE 218 (226)
T ss_dssp CHHHHHHHHCCTT-CEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHH
T ss_pred HHHHHHHHhcCCC-ceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHH
Confidence 8999999999888 899999999999999999999999986655555543323334689888888765443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.93 E-value=1.8e-09 Score=103.48 Aligned_cols=131 Identities=18% Similarity=0.199 Sum_probs=92.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
+..++....++.+ +.+.+.++.|+.............++....... +..... ..........+..+...
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~-------~~~~~~~~~~~~~~~~~ 137 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHK---LEIDDS-------DRVVGYQLRQKDPKRQS 137 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEE---EEECTT-------SCEEEEECCSSSHHHHH
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcce---eeeecc-------cccccccccchhhHHHH
Confidence 4566677777665 578999999999999999999999985421100 000000 00112233455666777
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
++.++... +.|+++|||.||++|++.||+||||++..+..++++|+++. ++.+.+.++|.+.
T Consensus 138 ~~~~~i~~-~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 138 VIAFKSLY-YRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 199 (206)
T ss_dssp HHHHHHTT-CEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHHH
T ss_pred HHHhcccc-cceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHHH
Confidence 88888777 89999999999999999999999996555666677788765 5777788777554
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=4.9e-09 Score=102.38 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=39.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
..+.+.++++|++++++|++++++|||+...+..+.+++|+.
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 357788999999999999999999999999999999999984
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.50 E-value=2.7e-08 Score=97.48 Aligned_cols=55 Identities=24% Similarity=0.243 Sum_probs=48.9
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCC----cccHHHHHhCC-eeEEecCCcHHHHhhcCEEe
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDG----INDSLALDAAN-VGISVDSGASVAKDLADIIL 566 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg----~ND~~~l~~A~-vgia~~~~~~~~~~~ad~vl 566 (792)
..|...++.+.+...+.|+++||+ .||.+||+.|+ .|+||+|+.+.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 478899999988766899999995 59999999997 69999999999999998865
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.41 E-value=1.5e-07 Score=83.08 Aligned_cols=132 Identities=14% Similarity=0.146 Sum_probs=95.1
Q ss_pred EEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCccc-ccccceEeEEeCCCCCCCeEEEEEeeCCCC
Q 045750 261 IMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRF-QASKWKKLDEIPFDFVRRKVSVILETESIT 339 (792)
Q Consensus 261 ~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~-~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~ 339 (792)
+++++++.++.++++++.+|+ ..+..+.||+.+||+++|++.+... ....+......||....+...+.+.
T Consensus 3 q~td~ip~~G~~~~ell~~AA---~aE~~SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----- 74 (136)
T d2a29a1 3 QASEFIPAQGVDEKTLADAAQ---LASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINID----- 74 (136)
T ss_dssp EEEEEEECTTCCHHHHHHHHH---HHHHTCCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEET-----
T ss_pred CcceEEeCCCCCHHHHHHHHH---HHhCCCCchHHHHHHHHHHHhcCCCccccccccccccccccccceEEEEEC-----
Confidence 378999999999999999994 4567889999999999998765432 3334455556677766665555442
Q ss_pred ccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCC
Q 045750 340 EDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRN 419 (792)
Q Consensus 340 ~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~ 419 (792)
...+..|+++.+.+.+.... ..++ ..+.+..++++.+|.+++.++.
T Consensus 75 ---------g~~v~~G~~~~~~~~~~~~g-------~~~~----~~~~~~~~~~~~~G~Tvv~Va~-------------- 120 (136)
T d2a29a1 75 ---------NRMIRKGSVDAIRRHVEANG-------GHFP----TDVDQKVDQVARQGATPLVVVE-------------- 120 (136)
T ss_dssp ---------TEEEEEECHHHHHHHHHHHT-------CCCC----HHHHHHHHHHHHTTSEEEEEEE--------------
T ss_pred ---------CEEEEecHHHHHHHHHHHcC-------CCCc----HHHHHHHHHHHHCCCeEEEEEE--------------
Confidence 23677899987766543210 0122 3345566888999999999986
Q ss_pred CCCCCCCcEEEEecccCCCCC
Q 045750 420 DGPIESDMVFLGLITFYDPPK 440 (792)
Q Consensus 420 ~~~~e~~l~~lG~i~~~d~~r 440 (792)
|.+++|++++.|+++
T Consensus 121 ------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 121 ------GSRVLGVIALKDIVK 135 (136)
T ss_dssp ------TTEEEEEEEEEESSC
T ss_pred ------CCEEEEEEEEEeecC
Confidence 348999999999986
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.41 E-value=1.7e-07 Score=90.76 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=44.9
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+|...++.+.++. .++++||+.||.+||+.|+.|+||++|.. +..|++++. +...+.+.+
T Consensus 158 ~~Kg~al~~l~~~~--~~i~~GDs~ND~~Mf~~~~~~~av~~g~~--~~~A~~~~~--~~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGER--PAIIAGDDATDEAAFEANDDALTIKVGEG--ETHAKFHVA--DYIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTTS--CEEEEESSHHHHHHHHTTTTSEEEEESSS--CCCCSEEES--SHHHHHHHH
T ss_pred CCHHHHHHHHhccc--cceeecCCCChHHHHhccCCeEEEEeCCC--CccCeEEcC--CHHHHHHHH
Confidence 47999999998764 57799999999999999977766653322 457888884 344454444
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.88 E-value=2e-05 Score=77.41 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=88.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.++++.|+++|+++.++|+.+......+.+++|+.. +.++++.+... .+-.|+.-
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~----------------~KP~p~~~ 162 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA----------------GRPYPWMC 162 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC----------------CTTSSHHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccc----------------cccChHHH
Confidence 578999999999999999999999999999999999998853 33444433321 11134444
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCcH---------------------------HHHhhcCEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGAS---------------------------VAKDLADIIL 566 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~~---------------------------~~~~~ad~vl 566 (792)
...++.+.-...+.+++|||+.+|+.+-+.||+ .|++..|.. ..+.-||+++
T Consensus 163 ~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi 242 (257)
T d1swva_ 163 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI 242 (257)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 556666654322678899999999999999998 355543210 1112389998
Q ss_pred ccCCchHHHHHHH
Q 045750 567 LEKDLNVLVAGVE 579 (792)
Q Consensus 567 ~~~~~~~i~~~i~ 579 (792)
+++..+..+|+
T Consensus 243 --~~l~eL~~ii~ 253 (257)
T d1swva_ 243 --ETMQELESVME 253 (257)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 67877777775
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.86 E-value=1.5e-05 Score=76.75 Aligned_cols=123 Identities=14% Similarity=0.108 Sum_probs=80.5
Q ss_pred CChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 439 PKDSAKQALWRLAKKG-VKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~G-i~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
+-|++.+++++|++.| +++.++|+.....+....+++|+... .++.+.+...... .|..-.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~----------------~p~~~~ 155 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNE----------------LPHIAL 155 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGG----------------HHHHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccc----------------hhHHHH
Confidence 4689999999999987 89999999999999999999999642 2222221111000 011112
Q ss_pred HHHHHHhhcC--CCEEEEEcCCcccHHHHHhCCee---EEecCCc-HH-HHhhcCEEeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVG--KHVVGFLGDGINDSLALDAANVG---ISVDSGA-SV-AKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~--~~~v~~iGDg~ND~~~l~~A~vg---ia~~~~~-~~-~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
..++.+...+ .+.++||||+.+|+.+-+.||+. |+.|..+ +. .+..+|+++ +++..+.+.+.
T Consensus 156 ~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 156 ERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 2233332211 25788999999999999999964 3334333 22 333579998 67877777664
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.82 E-value=5.4e-05 Score=74.75 Aligned_cols=130 Identities=14% Similarity=0.196 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc--cccchhhhccCHHHHHHhhhcceEEEE-----eC
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH--VSTGPDLELLSQESFHERVKRATVLAR-----LT 510 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~--~~~g~~~~~~~~~~~~~~~~~~~v~~~-----~~ 510 (792)
++||++++.++.|++.|++++++||--...+.++++++|+.... ++++.- . .+++. +... ..
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l-~-f~~~~---------~~~~~~~~~i~ 203 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFM-D-FDENG---------VLKGFKGELIH 203 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECE-E-ECTTS---------BEEEECSSCCC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEE-E-EeCCe---------eEeeccCCccc
Confidence 58999999999999999999999999999999999999996431 222110 0 00000 0000 11
Q ss_pred hhhHHHHH----HHHhhc-CCCEEEEEcCCcccHHHHHh---CCeeEEec--CCc-----HHHHhhcCEEeccCCchHHH
Q 045750 511 PTQKLRVV----QSLQSV-GKHVVGFLGDGINDSLALDA---ANVGISVD--SGA-----SVAKDLADIILLEKDLNVLV 575 (792)
Q Consensus 511 p~~K~~iv----~~l~~~-~~~~v~~iGDg~ND~~~l~~---A~vgia~~--~~~-----~~~~~~ad~vl~~~~~~~i~ 575 (792)
...|.+.+ ...+.. +...+.++|||.||+.|.+. ++..+++| +.. +.-.+.=|+|+.++.--.++
T Consensus 204 ~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~ 283 (291)
T d2bdua1 204 VFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVV 283 (291)
T ss_dssp TTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred cccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHH
Confidence 22333222 222222 22678899999999999874 34555554 322 23345679998877654454
Q ss_pred HHH
Q 045750 576 AGV 578 (792)
Q Consensus 576 ~~i 578 (792)
..|
T Consensus 284 ~~i 286 (291)
T d2bdua1 284 NSI 286 (291)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.80 E-value=2e-05 Score=75.23 Aligned_cols=117 Identities=20% Similarity=0.214 Sum_probs=81.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.. +.++++++... .+-.|+--.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~----------------~Kp~~~~~~ 151 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY----------------SKPHPQVYL 151 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC----------------CTTSTHHHH
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----------------chhhHHHHH
Confidence 346999999999999999999999999999999999999953 22333322211 111233345
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecC---CcHHHHhhcCEEeccCCchH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDS---GASVAKDLADIILLEKDLNV 573 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~---~~~~~~~~ad~vl~~~~~~~ 573 (792)
.+++.+.-.. +.+++|||+.+|+.+-+.||+. |++.. ..+.....||+++ +++..
T Consensus 152 ~~~~~l~~~~-~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~e 210 (218)
T d1te2a_ 152 DCAAKLGVDP-LTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTE 210 (218)
T ss_dssp HHHHHHTSCG-GGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGG
T ss_pred HHHHHcCCCc-hhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhh
Confidence 5666665555 7889999999999999999984 34432 2222335678887 44554
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.80 E-value=3.5e-06 Score=81.87 Aligned_cols=51 Identities=22% Similarity=0.365 Sum_probs=37.7
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhCC-eeEEecCCcHHHHhhcC
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGD----GINDSLALDAAN-VGISVDSGASVAKDLAD 563 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGD----g~ND~~~l~~A~-vgia~~~~~~~~~~~ad 563 (792)
.+|...++.+.+...+.++++|| |.||.+||+.|+ .|+++++ .+.+++.++
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~-~~~~~~~~~ 239 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA-PEDTRRICE 239 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS-HHHHHHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC-HHHHHHHHH
Confidence 46777777777665588999999 789999999998 6777766 455555544
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.77 E-value=8.6e-06 Score=78.07 Aligned_cols=122 Identities=18% Similarity=0.211 Sum_probs=85.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.++.+.+... ..-.|+--.
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~kp~p~~~~ 158 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----------------IKPHPAPFY 158 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccc----------------ccccchhhH
Confidence 457999999999999999999999999999999999999953 11222211111 011234444
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecC----CcHHHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDS----GASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~----~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+.+.++-.. +.+++|||+.+|+.+-+.||+ .|.+.. ..+.....+|+++ +++..+.++|
T Consensus 159 ~~~~~~~~~~-~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 159 YLCGKFGLYP-KQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHTCCG-GGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred HHHHHhhhhh-hccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 5555555555 778899999999999999998 555532 2233445689887 5677665543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.46 E-value=0.00029 Score=64.69 Aligned_cols=117 Identities=22% Similarity=0.164 Sum_probs=77.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHH---------------HHHHHHhCCCCCccccchhhhccCHHHHHHhhhc
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLA---------------IKICHEVGIRTTHVSTGPDLELLSQESFHERVKR 502 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a---------------~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~ 502 (792)
++-|++.+++++|+++|++++++|..+.... .......|+...
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 84 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---------------------- 84 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS----------------------
T ss_pred eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc----------------------
Confidence 3558999999999999999999999874221 111111222110
Q ss_pred ceEEEEe------------------ChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee--EEecC---CcHHHH
Q 045750 503 ATVLARL------------------TPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG--ISVDS---GASVAK 559 (792)
Q Consensus 503 ~~v~~~~------------------~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg--ia~~~---~~~~~~ 559 (792)
...+|.. .|..-..+.+.+.-.. +.+.||||..+|+.+-++|+++ +.+.. ..+...
T Consensus 85 ~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~-~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~ 163 (182)
T d2gmwa1 85 GIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDM-AASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAE 163 (182)
T ss_dssp EEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCG-GGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHH
T ss_pred ceeecccccccccccccccccccCCccccccchhhhccccc-ccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccc
Confidence 1122222 2334456666666555 6788999999999999999985 44432 245556
Q ss_pred hhcCEEeccCCchHHHHHHH
Q 045750 560 DLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 560 ~~ad~vl~~~~~~~i~~~i~ 579 (792)
..||+++ +++..+.++|+
T Consensus 164 ~~ad~v~--~~l~dl~~~ik 181 (182)
T d2gmwa1 164 NAADWVL--NSLADLPQAIK 181 (182)
T ss_dssp HHCSEEE--SCGGGHHHHHH
T ss_pred cCCCEEE--CCHHHHHHHhc
Confidence 6799998 77888888875
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.40 E-value=0.00046 Score=65.89 Aligned_cols=123 Identities=14% Similarity=0.165 Sum_probs=84.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+ +|++++++|+..........+.+|+.. +.++.+.+... .+-.|+-=.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~----------------~KP~~~~~~ 162 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGF----------------FKPHPRIFE 162 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTB----------------CTTSHHHHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccccccccccc----------------cchhhHHHH
Confidence 46799999999996 589999999999999999999999853 22222222111 000122223
Q ss_pred HHHHHHhhcCCCEEEEEcCC-cccHHHHHhCCeeEE-e--cCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDG-INDSLALDAANVGIS-V--DSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg-~ND~~~l~~A~vgia-~--~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.+++.+.-.. ..+++|||+ .+|+.+-+.||+... + +.......+.+|+++ +++..+.+++++
T Consensus 163 ~~~~~l~~~p-~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 228 (230)
T d1x42a1 163 LALKKAGVKG-EEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVDE 228 (230)
T ss_dssp HHHHHHTCCG-GGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHHH
T ss_pred HHHhhhcccc-cccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHHH
Confidence 4444444344 678899998 689999999998533 3 234445556789988 668888888764
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.39 E-value=0.00012 Score=68.96 Aligned_cols=117 Identities=14% Similarity=0.042 Sum_probs=79.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHH--
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKL-- 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~-- 515 (792)
++.+++.+.++.+++.| ++.++|+.....+..+.+++|+.... + ..+.+...+..|.
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d------------------~v~~~~~~~~~~p~~ 142 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--D------------------GIYGSSPEAPHKADV 142 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--S------------------EEEEECSSCCSHHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--c------------------ccccccccccccccc
Confidence 46789999999999875 89999999999999999999986310 0 0111222222333
Q ss_pred --HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEec---CCcHHHH-hhcCEEeccCCchHHHHHH
Q 045750 516 --RVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVD---SGASVAK-DLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 --~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~---~~~~~~~-~~ad~vl~~~~~~~i~~~i 578 (792)
.+++.++-.. +.+++|||+.||+.+-++||+ .|++. +..+... ..+|+++ +++..+.+.+
T Consensus 143 ~~~~~~~~~~~~-~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~l 209 (210)
T d2ah5a1 143 IHQALQTHQLAP-EQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAYF 209 (210)
T ss_dssp HHHHHHHTTCCG-GGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHHT
T ss_pred cchhhhhhhccc-ccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHHh
Confidence 3333333334 678899999999999999998 55653 2233333 3489987 5577666543
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.28 E-value=0.00014 Score=64.35 Aligned_cols=103 Identities=10% Similarity=-0.079 Sum_probs=64.2
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhh--cceEEEE-----
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVK--RATVLAR----- 508 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~--~~~v~~~----- 508 (792)
++++.|++.+.++.++++|++++++||++........+.++. . ......... ....+.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~-------------~-~~~~~~~~~~~~~~~~~~~~~~~ 99 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM-------------T-RKWVEDIAGVPLVMQCQREQGDT 99 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH-------------H-HHHHHHTTCCCCSEEEECCTTCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH-------------H-hhhhhhcCCCcEEEeeccccccc
Confidence 678999999999999999999999999974322111111100 0 000000000 0011111
Q ss_pred -eChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEec
Q 045750 509 -LTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVD 552 (792)
Q Consensus 509 -~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~ 552 (792)
-.+..|..+.+.+...+...++++||...|+.|.+++|+- +.+.
T Consensus 100 ~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~ 145 (149)
T d1ltqa1 100 RKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA 145 (149)
T ss_dssp SCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred CCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeC
Confidence 1234577777777666546778899999999999999984 4443
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.19 E-value=0.00016 Score=67.86 Aligned_cols=116 Identities=13% Similarity=0.120 Sum_probs=76.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+... .+..+.+++|+... .++.+.+... .+-.|+--.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~----------------~Kp~~~~~~ 144 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFV----------------RKPSPEAAT 144 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCC----------------CTTSSHHHH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccc----------------cchhHHHHH
Confidence 4579999999999999999999999765 45678899999641 2222211110 111344445
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCCcHHHHhhcCEEeccCCchHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSGASVAKDLADIILLEKDLNVLVAG 577 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~~~~~~~ad~vl~~~~~~~i~~~ 577 (792)
.+++.+.-.. ..+++|||+.+|+.+-++||+. |++..+.. .+|..+ +++..+.++
T Consensus 145 ~~~~~~~~~p-~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 145 YLLDKYQLNS-DNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHTCCG-GGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHH
T ss_pred HHHHHhCCCC-ceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHH
Confidence 5566665545 7899999999999999999984 44554421 244444 345555443
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.11 E-value=0.00011 Score=69.20 Aligned_cols=118 Identities=11% Similarity=0.096 Sum_probs=79.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|++ ++++.++|+.....+..+.+++|+... .++.+.+... ..-.|+--.
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------------~KP~p~~~~ 144 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK----------------RKPDPLPLL 144 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC----------------CTTSSHHHH
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccccccccccccccc----------------chhhhhhhc
Confidence 356899999999975 799999999999999999999998531 1122211110 011234445
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe---cCCcHHHHhhcCEEeccCCchHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV---DSGASVAKDLADIILLEKDLNVLV 575 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~---~~~~~~~~~~ad~vl~~~~~~~i~ 575 (792)
.+++.++-.. +.+++|||+.+|+.+-++||+.... |..+....+.+|+++ +++..|.
T Consensus 145 ~~~~~~~~~~-~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 145 TALEKVNVAP-QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHTTCCG-GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred ccccceeeec-cceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 5555555444 6788999999999999999997654 333444455678877 4455443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.001 Score=63.90 Aligned_cols=114 Identities=11% Similarity=0.083 Sum_probs=77.7
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc---cccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH---VSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~---~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
.-.+.|++.+.+++|+++|+++.++|+..........+.+|+..-. .....+. ...+-.|+
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----------------~~~KP~p~ 188 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTK----------------IGHKVESE 188 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGG----------------GCCTTCHH
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccc----------------cccCCCcH
Confidence 3456899999999999999999999999999999999999874311 0000000 00112233
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe----cC-CcHHHHhhcCEEe
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV----DS-GASVAKDLADIIL 566 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~----~~-~~~~~~~~ad~vl 566 (792)
-=....+.+.-.. +.+++|||..+|+.+-++||+.... |+ ........++.++
T Consensus 189 ~~~~~~~~~~~~p-~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i 246 (253)
T d1zs9a1 189 SYRKIADSIGCST-NNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 246 (253)
T ss_dssp HHHHHHHHHTSCG-GGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred HHHHHHHHhCCCc-CcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEE
Confidence 3345555555555 7889999999999999999995544 32 2333444556666
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.98 E-value=0.0019 Score=53.56 Aligned_cols=112 Identities=19% Similarity=0.200 Sum_probs=73.5
Q ss_pred EEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCCCCCCCeEEEEEeeCCCCc
Q 045750 261 IMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITE 340 (792)
Q Consensus 261 ~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~ 340 (792)
+|+++++.++ +++++|.++ +..+..+.||+.+|+++++++.+.... ........| .+.+ .+
T Consensus 1 eVt~i~~~~~-~e~elL~~a---aslE~~S~HPlA~AIv~~a~~~~~~~~--~~~~~~~~~----G~Gi---------~g 61 (113)
T d2b8ea2 1 EVTDLVPLNG-DERELLRLA---AIAERRSEHPIAEAIVKKALEHGIELG--EPEKVEVIA----GEGV---------VA 61 (113)
T ss_dssp EEEEEEESSS-CHHHHHHHH---HHHTTTCCSHHHHHHHHHHHTTTCCCC--CCSCEEEET----TTEE---------EE
T ss_pred CceEEEecCC-CHHHHHHHH---HHHHCcCCCchHHHHHHHHHHhcCCCC--ccccceeec----cceE---------Ee
Confidence 3566766665 678898888 567899999999999999988776432 122223333 1111 11
Q ss_pred cccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCC
Q 045750 341 DRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRND 420 (792)
Q Consensus 341 ~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~ 420 (792)
.. +.-|+++.+.+..-.. ++ .+.+..+++..+|..++.++..
T Consensus 62 -------~~--v~vG~~~~~~~~~~~~-----------~~----~~~~~~~~~~~~G~T~v~va~d-------------- 103 (113)
T d2b8ea2 62 -------DG--ILVGNKRLMEDFGVAV-----------SN----EVELALEKLEREAKTAVIVARN-------------- 103 (113)
T ss_dssp -------TT--EEEECHHHHHHTTCCC-----------CH----HHHHHHHHHHTTTCEEEEEEET--------------
T ss_pred -------EE--EEECcHHHHHhcCCCC-----------CH----HHHHHHHHHHhCCCeEEEEEEC--------------
Confidence 11 3458888876543222 22 3455678889999999999863
Q ss_pred CCCCCCcEEEEeccc
Q 045750 421 GPIESDMVFLGLITF 435 (792)
Q Consensus 421 ~~~e~~l~~lG~i~~ 435 (792)
..++|++++
T Consensus 104 ------~~~~G~ial 112 (113)
T d2b8ea2 104 ------GRVEGIIAV 112 (113)
T ss_dssp ------TEEEEEEEE
T ss_pred ------CEEEEEEEE
Confidence 378898875
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.97 E-value=0.0011 Score=59.47 Aligned_cols=94 Identities=14% Similarity=0.024 Sum_probs=65.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH-HHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeCh--hhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSL-SLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTP--TQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~-~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K 514 (792)
++.|++.++++.|+++|+++.++|+.+. ..+..+-+.+++.... ..+.....| +.-
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~---------------------~~~~~~~kp~~~~~ 104 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF---------------------IQREIYPGSKVTHF 104 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC---------------------SEEEESSSCHHHHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc---------------------eeeecccCCChHHH
Confidence 5789999999999999999999997654 5566677777774211 012222222 233
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecC
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDS 553 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~ 553 (792)
.++.+.+.-.. +.+++|||..+|+.+-++||+ .|.+..
T Consensus 105 ~~~~~~~~~~~-~~~l~igD~~~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 105 ERLHHKTGVPF-SQMVFFDDENRNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp HHHHHHHCCCG-GGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred HHHHHHhCCCh-HHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 34455544445 778899999999999999999 445543
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.94 E-value=0.00075 Score=62.07 Aligned_cols=106 Identities=15% Similarity=0.074 Sum_probs=69.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++++.++.+++.|++++++|+.+.... ...+++|+... .++.+.+... .+-.|+--.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~~~~ 141 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFK----------------RKPNPESML 141 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCC----------------CTTSCHHHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccc----------------cCCCHHHHH
Confidence 4579999999999999999999999876554 56788888531 1222211100 000122222
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLAD 563 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad 563 (792)
.+.+ +.+.+.+++|||+.+|+.+-++||+-...-++.+..++..|
T Consensus 142 ~~~~---~~~~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d 186 (187)
T d2fi1a1 142 YLRE---KYQISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 186 (187)
T ss_dssp HHHH---HTTCSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHH---HcCCCCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcC
Confidence 3333 33335588999999999999999997544356666666655
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.75 E-value=0.00028 Score=68.67 Aligned_cols=40 Identities=15% Similarity=0.201 Sum_probs=31.8
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEV 475 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~ 475 (792)
.+.+=|++.++|++|+++|++++++|++...+...+++++
T Consensus 16 ~~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 16 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 3444489999999999999999999987766666666554
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.0028 Score=60.75 Aligned_cols=123 Identities=15% Similarity=0.076 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|++ |++++++|+.+........+++|+... .++.+.+... .+=+|+-=.
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~----------------~KP~p~~~~ 171 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKE----------------EKPAPSIFY 171 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSS----------------CTTCHHHHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccccccccccccccc----------------chhhhhhHH
Confidence 467999999999985 899999999999999999999998531 2222221110 000122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCee-EEecC----CcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVG-ISVDS----GASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vg-ia~~~----~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.+.+.+.-.. +.+++|||+. +|+.+-+.||+. +..-+ ........+|+++ +++..+..+++.
T Consensus 172 ~~~~~~~~~~-~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~~ 239 (247)
T d2gfha1 172 HCCDLLGVQP-GDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQS 239 (247)
T ss_dssp HHHHHHTCCG-GGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHHH
T ss_pred HHHHHhhcCH-HhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHHH
Confidence 3444444444 6788999995 899999999995 54321 1222334578888 568888887754
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.56 E-value=0.0035 Score=60.84 Aligned_cols=43 Identities=14% Similarity=0.093 Sum_probs=33.5
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTG---DSLSLAIKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tg---d~~~~a~~ia~~~gi~ 478 (792)
.+++=|++.++++.|+++|++++++|+ ++........+++|++
T Consensus 21 ~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~ 66 (261)
T d1vjra_ 21 DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66 (261)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CCccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccc
Confidence 344458999999999999999999985 5556666666778873
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.32 E-value=0.005 Score=57.32 Aligned_cols=92 Identities=18% Similarity=0.124 Sum_probs=58.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH--------HH-------HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhc
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSL--------SL-------AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKR 502 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~--------~~-------a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~ 502 (792)
.+-|++.++|++|+++|++++++|..+. .. .....+..|+...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~---------------------- 105 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD---------------------- 105 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS----------------------
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccc----------------------
Confidence 4679999999999999999999996431 11 1122223333111
Q ss_pred ceEEEEe-------------------ChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecC
Q 045750 503 ATVLARL-------------------TPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDS 553 (792)
Q Consensus 503 ~~v~~~~-------------------~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~ 553 (792)
.++... .|..-.+..+.+.-.. +.+.||||..+|+.+-+.|++ ++.+..
T Consensus 106 -~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~-~~~~~VGD~~~Di~aA~~AGi~~i~v~~ 174 (209)
T d2o2xa1 106 -MVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDL-QRSLIVGDKLADMQAGKRAGLAQGWLVD 174 (209)
T ss_dssp -EEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCG-GGCEEEESSHHHHHHHHHTTCSEEEEET
T ss_pred -eEEEecccccccccccccccccccccchhhhHhHHHhCCCc-cceEEeCCCHHHHHHHHHCCCcEEEEeC
Confidence 111111 2233345555555444 678899999999999999999 566643
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.32 E-value=0.0016 Score=59.83 Aligned_cols=89 Identities=24% Similarity=0.314 Sum_probs=63.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe--Chh
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSL----SLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL--TPT 512 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~----~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~--~p~ 512 (792)
+.|++.+.++.+++.|++++.+|||.. .+++.+.+.+|+..... +..++.+- ...
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~-------------------~~vll~~~~~~K~ 147 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM-------------------NPVIFAGDKPGQN 147 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB-------------------CCCEECCCCTTCC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccc-------------------cceEeeCCCCCch
Confidence 568999999999999999999999974 36667777789853210 00122221 123
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEe
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISV 551 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~ 551 (792)
.|.+.++ ++ +.++++||..+|..+-++|++ +|.+
T Consensus 148 ~rr~~Ik---~y--~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 148 TKSQWLQ---DK--NIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CSHHHHH---HT--TEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHH---Hc--CeEEEecCCHHHHhHHHHcCCCceEe
Confidence 4555554 33 689999999999999999996 6766
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.30 E-value=0.0035 Score=57.47 Aligned_cols=137 Identities=17% Similarity=0.257 Sum_probs=91.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhcc--CH------------------HHHH-
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELL--SQ------------------ESFH- 497 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~--~~------------------~~~~- 497 (792)
+-|++.++++.+++. ...+++|-.-.+-+.++|+.+|+....--+.-+++.. ++ +++.
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 468999999999988 7888888888889999999999963311111122211 11 1111
Q ss_pred ---Hhh---------hcceEEEEeChhhHHHHHHHHhhc-CCCEEEEEcCCcccHHHHHhCCe--eEEec-CCcHHHHhh
Q 045750 498 ---ERV---------KRATVLARLTPTQKLRVVQSLQSV-GKHVVGFLGDGINDSLALDAANV--GISVD-SGASVAKDL 561 (792)
Q Consensus 498 ---~~~---------~~~~v~~~~~p~~K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~A~v--gia~~-~~~~~~~~~ 561 (792)
+.+ ..+... --..|..+++...+. +-...+++||+..|+.||+.|.= |+|+. ||.+-+...
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~e 237 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKH 237 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTT
T ss_pred HHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccc
Confidence 111 111111 224566665554432 21345789999999999998843 77777 899999999
Q ss_pred cCEEeccCCchHHHHHHH
Q 045750 562 ADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 562 ad~vl~~~~~~~i~~~i~ 579 (792)
||+.+.+.+...+...+.
T Consensus 238 A~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 238 ADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp CSEEEECSSTHHHHHHHH
T ss_pred cceEEeccchhHHHHHHH
Confidence 999999988877766664
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.16 E-value=0.0034 Score=58.88 Aligned_cols=121 Identities=14% Similarity=0.140 Sum_probs=83.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
..+.+++.++++.+++.|+++.++|+-.........+..++.. +.++.+.+... .+-.|+-=
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~----------------~KP~p~~~ 155 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV----------------YKPDNRVY 155 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC----------------CTTSHHHH
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeec----------------cccHHHHH
Confidence 3457899999999999999999999999999999999888853 12222222111 01123333
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEE-ec---CCcHHHHhhcCEEeccCCchHHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGIS-VD---SGASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia-~~---~~~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
..+.+.+.-.. +.+++|||+.+|+.+-++||+-.+ +. ...+.....+|+++ +++..+.+
T Consensus 156 ~~~~~~~g~~p-~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 156 ELAEQALGLDR-SAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHTSCG-GGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHhCCCC-ceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 45555555455 779999999999999999998644 42 23333445579887 56776654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.04 E-value=0.0023 Score=61.72 Aligned_cols=48 Identities=19% Similarity=0.210 Sum_probs=36.0
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLT---GDSLSLAIKICHEVGIR 478 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~T---gd~~~~a~~ia~~~gi~ 478 (792)
|++.-.+.+=|++.++|+.++++|++++++| ++......+.-+++|++
T Consensus 12 GTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 12 GVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 3333345555789999999999999999998 55566666666778874
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.85 E-value=0.0034 Score=58.97 Aligned_cols=109 Identities=11% Similarity=0.050 Sum_probs=70.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++-|++.+.++.|++.|+++.++|+... +....+..|+.. ..++.+.+... .+-.|+-=
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~----------------~KP~~~~~ 151 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAA----------------SKPAPDIF 151 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSS----------------CTTSTHHH
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccccccccccccc----------------cccChHHH
Confidence 45678999999999999999999999865 567788888853 12222222111 01112222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCcHHHHhhcCEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGASVAKDLADIIL 566 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~~~~~~~ad~vl 566 (792)
....+.++-.. +.+++|||+.+|+.+-+.||+ .|+++.+ .....++.++
T Consensus 152 ~~~l~~~~i~~-~~~l~VgD~~~di~~A~~aG~~~i~v~~~--~~~~~~~~~~ 201 (221)
T d1o08a_ 152 IAAAHAVGVAP-SESIGLEDSQAGIQAIKDSGALPIGVGRP--EDLGDDIVIV 201 (221)
T ss_dssp HHHHHHTTCCG-GGEEEEESSHHHHHHHHHHTCEEEEESCH--HHHCSSSEEE
T ss_pred HHHHHHcCCCC-ceEEEEecCHHHHHHHHHcCCEEEEECCh--hhcccccEEc
Confidence 33444444344 668899999999999999998 5666543 2233455554
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.80 E-value=0.0037 Score=60.36 Aligned_cols=51 Identities=22% Similarity=0.257 Sum_probs=35.0
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcc-cHHHHHhCCe-eEEecCC---cHHHHhh---cCEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGIN-DSLALDAANV-GISVDSG---ASVAKDL---ADIIL 566 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~N-D~~~l~~A~v-gia~~~~---~~~~~~~---ad~vl 566 (792)
..+.+.++-.. +.++||||+.+ |+.+-++||+ +|.+..| .+..++. .|+++
T Consensus 187 ~~al~~l~i~~-~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi 245 (253)
T d1wvia_ 187 NKALDRLGVKR-HEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVL 245 (253)
T ss_dssp HHHHHHHTSCG-GGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEE
T ss_pred eehhhhccccc-cceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEE
Confidence 45555555455 78999999965 9999999999 7777432 2223333 38887
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.70 E-value=0.0097 Score=55.71 Aligned_cols=122 Identities=18% Similarity=0.152 Sum_probs=77.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC---ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.+.|++.+.+++++. +..++|+.....+..+.+++|+... .+.++.+.... .++-.|+.=
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~--------------~~KP~~~~~ 147 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGAD--------------RVKPKPDIF 147 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTT--------------CCTTSSHHH
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeeccccccccc--------------ccccCHHHH
Confidence 457888888877654 5579999999999999999999642 11111111000 001112233
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCc-------HH-HHhhcCEEeccCCchHHHHHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGA-------SV-AKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~-------~~-~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
....+.+.-.. +.+++|||+.+|+.+-+.||+ .|++..+. +. ...-+|+++ +++..+..++.
T Consensus 148 ~~~~~~l~~~p-~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 148 LHGAAQFGVSP-DRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHTCCG-GGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHhhCCCC-ceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 44555555445 678899999999999999998 45554332 12 222489998 66777766653
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.65 E-value=0.007 Score=56.65 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=69.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGD----SLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd----~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
.+.|++.+.+++|+++|+++.++|+. ............|+.. +.++.+.+... ..-.|
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~----------------~KP~p 160 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGM----------------IKPEP 160 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSC----------------CTTCH
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccC----------------CCCCh
Confidence 56899999999999999999999963 2333444455555532 22222222111 11134
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCcHHHHh
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGASVAKD 560 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~~~~~~ 560 (792)
+--...++.++-.. +.++||||..+|+.+-++||+ +|.+.++.+...+
T Consensus 161 ~~~~~~~~~~~v~p-~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 161 QIYNFLLDTLKAKP-NEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp HHHHHHHHHHTSCT-TSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred HHHHHHHHHhCCCc-ceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHH
Confidence 44556666666666 678899999999999999998 6666655554433
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=94.93 E-value=0.0087 Score=53.00 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=55.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCC--------HHHH-------HHHHHHhCCCCCccccchhhhccCHHHHHHhhhc
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDS--------LSLA-------IKICHEVGIRTTHVSTGPDLELLSQESFHERVKR 502 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~--------~~~a-------~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~ 502 (792)
.+-|++.++++.|+++|++++++|..+ .... .......|+...
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~---------------------- 87 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD---------------------- 87 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEE----------------------
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccc----------------------
Confidence 457899999999999999999999764 1111 112222232110
Q ss_pred ceEEEEe-----------ChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEec
Q 045750 503 ATVLARL-----------TPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVD 552 (792)
Q Consensus 503 ~~v~~~~-----------~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~ 552 (792)
...+|-. .|+--.++++.+.-.. +.+.||||...|..|-+.||+ +|.++
T Consensus 88 ~i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id~-~~~~~IGD~~~Di~aA~~aG~~~i~i~ 148 (161)
T d2fpwa1 88 EVLICPHLPADECDCRKPKVKLVERYLAEQAMDR-ANSYVIGDRATDIQLAENMGINGLRYD 148 (161)
T ss_dssp EEEEECCCGGGCCSSSTTSSGGGGGGC----CCG-GGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred eeeeccccccccccccccccHHHHHHHHhcCCCh-hcEEEECCCHHHHHHHHHcCCeEEEEC
Confidence 0112211 2222234444444444 678899999999999999999 45554
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=94.87 E-value=0.073 Score=50.06 Aligned_cols=122 Identities=17% Similarity=0.131 Sum_probs=81.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++-|++.+++++++ |+++.++|..+...+....++.|+.. +.++.+.+.... +=.|+-=
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~----------------KP~p~~f 153 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVF----------------KPHPDSY 153 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC----------------TTSHHHH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccccccccccccc----------------CccHHHH
Confidence 356788999999885 78899999999999999999998853 223333322110 1112223
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCCcH--------------------------HHHhhcCEEec
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSGAS--------------------------VAKDLADIILL 567 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~~--------------------------~~~~~ad~vl~ 567 (792)
...++.+.-.. +.+++|||+.+|+.+-++||+. |.+..... ......|+++
T Consensus 154 ~~a~~~lg~~p-~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i- 231 (245)
T d1qq5a_ 154 ALVEEVLGVTP-AEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV- 231 (245)
T ss_dssp HHHHHHHCCCG-GGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE-
T ss_pred HHHHHHhCCCh-hhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEE-
Confidence 44555555444 6789999999999999999984 44431110 1112378888
Q ss_pred cCCchHHHHHHH
Q 045750 568 EKDLNVLVAGVE 579 (792)
Q Consensus 568 ~~~~~~i~~~i~ 579 (792)
+++..+..+|+
T Consensus 232 -~~l~el~~lv~ 242 (245)
T d1qq5a_ 232 -PALGDLPRLVR 242 (245)
T ss_dssp -SSGGGHHHHHH
T ss_pred -CCHHHHHHHHH
Confidence 67888888775
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.28 E-value=0.0082 Score=55.99 Aligned_cols=101 Identities=17% Similarity=0.112 Sum_probs=62.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH----HHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK----ICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~----ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
++.|++.+.+++|+++|++++++|+........ .....++.. +.++.+.+... .+-.|
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~----------------~KP~~ 162 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGM----------------VKPEP 162 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTC----------------CTTCH
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEecccccc----------------chhHH
Confidence 468999999999999999999999754432222 222222211 12222221111 01123
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCc
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGA 555 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~ 555 (792)
+--..+++.+.-.. +.+++|||...|+.+-++||+ +|.+.++.
T Consensus 163 ~~~~~~~~~~~~~p-~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~ 206 (225)
T d1zd3a1 163 QIYKFLLDTLKASP-SEVVFLDDIGANLKPARDLGMVTILVQDTD 206 (225)
T ss_dssp HHHHHHHHHHTCCG-GGEEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred HHHHHHhhhcccCc-cceeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence 33345555555454 668899999999999999999 66675443
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=91.16 E-value=0.017 Score=52.31 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=59.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh-CCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEV-GIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~-gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.+++.+.++.+++.|+++.++|+-+...+...-.+. |+.. +.++.+++... ..-.|+-=
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~----------------~Kp~~~~~ 147 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM----------------RKPEARIY 147 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC----------------CTTCHHHH
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccc----------------cccchHHH
Confidence 46789999999999999999999986543332211111 1100 00111100000 01122222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCcH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGAS 556 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~~ 556 (792)
..+.+.+.-.. +.+++|||..+|+.+-+.||+ +|.+.+..+
T Consensus 148 ~~~~~~~~~~~-~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~ 189 (197)
T d2b0ca1 148 QHVLQAEGFSP-SDTVFFDDNADNIEGANQLGITSILVKDKTT 189 (197)
T ss_dssp HHHHHHHTCCG-GGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred HHHHHhcCCCC-CeEEEEeCCHHHHHHHHHcCCEEEEECCCCC
Confidence 34444444444 678999999999999999998 777764443
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=84.65 E-value=0.65 Score=38.05 Aligned_cols=42 Identities=17% Similarity=0.106 Sum_probs=33.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHhCCC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK---ICHEVGIR 478 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~---ia~~~gi~ 478 (792)
++|.+++.+.+++|++.|.++++.|+|....... ..++-|++
T Consensus 20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 20 GEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred ccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 4688999999999999999999999998765433 44555664
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=81.17 E-value=1.3 Score=36.12 Aligned_cols=51 Identities=10% Similarity=0.135 Sum_probs=40.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCccccchh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSL---------------SLAIKICHEVGIRTTHVSTGPD 487 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~---------------~~a~~ia~~~gi~~~~~~~g~~ 487 (792)
..|.+++.+.++.|++.|+++++.|+|.. ..+..-.++.|+..+.++-|.+
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~Yd~Li~gKP 88 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVPYDEILVGKP 88 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCCCSEEEECCC
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCCceEEEECCC
Confidence 36889999999999999999999999962 2344556777987766666654
|