Citrus Sinensis ID: 045789

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200------
Protein Sequence
MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCFRARPCFRAPSVAVFEETHEAHIAIKLQQQ
Secondary Structure (PSIPRED)
cccccEEEEEEccHHHHHcccEEEEEEEEccccccccccccccccccHHHHHHHHHHHHcccccccccEEcccccccccccHHHHHcEEEcccHHHHHHHHHcHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEccEEEEcccccccccccEEEEcccEEEEEEccccccccccEEEcccHHHEEEEEcccc
Secondary Structure Prediction (SSPRO)
EEcEEEEEEEEEHHHHHHHcccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHcccHHHccEEEccccccHHHHHHHHHHHHEEccHHHHcEcHHHHHHHHHHHHHHHHHHcEEccccccccEccccccccccEEEEcccccccccccccEEEEEccccccEEEEEcccccccccccccccccccEEEccccHHHHHcc
Coil and Loop (DISEMBL)
MGEGAGVLLLEELEHAKKRGTNIYAEILDgsltcdayhitaphpegvgMVSCMEKALAKsgvakedvnyinahapstrlgdLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQtgwihpnlnlenpdkhvlsrtsgasaafisipvikqfKTRFVLISFNGSFLSSLYMAScfrarpcfrapsvavfEETHEAHIAIKLQQQ
Flexible Loop (DISEMBL)
MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSgvakedvnyinahapstrlgdLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCFRARPCFRAPSVAVFEETHEAHIAIKLQQQ
Low Complexity Region (SEG)
MgegagvllleeleHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCFRARPCFRAPSVAVFEETHEAHIAIKLQQQ
Disordered region (IsUnstruct)
******VLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCFRARPCFRAPSVAVFEETHEAHIAI*****
Disordered Region (DISOPRED)
MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCFRARPCFRAPSVAVFEETHEAHIAIKLQ**
Disordered Region (DISEMBL)
MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCFRARPCFRAPSVAVFEETHEAHIAIKLQQQ
Disordered Region (DISPRO)
MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCFR****************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCFRARPCFRAPSVAVFEETHEAHIAIKLQQQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	206	2.2.26 [Sep-21-2011]
Q9C9P4	541	3-oxoacyl-[acyl-carrier-p	yes	no	0.665	0.253	0.659	4e-49
P52410	473	3-oxoacyl-[acyl-carrier-p	no	no	0.650	0.283	0.541	7e-40
P23902	462	3-oxoacyl-[acyl-carrier-p	N/A	no	0.650	0.290	0.548	4e-39
P73283	416	3-oxoacyl-[acyl-carrier-p	N/A	no	0.708	0.350	0.481	5e-32
O34340	413	3-oxoacyl-[acyl-carrier-p	yes	no	0.645	0.322	0.465	3e-30
P56902	421	3-oxoacyl-[acyl-carrier-p	yes	no	0.626	0.306	0.496	3e-30
Q83E37	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.640	0.318	0.461	3e-30
Q5TKS0	403	3-oxoacyl-[acyl-carrier-p	yes	no	0.635	0.325	0.471	2e-29
Q6GIA3	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.635	0.316	0.464	2e-29
Q7A6F8	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.635	0.316	0.464	2e-29

>sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1

 Score =  194 bits (493), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 97/147 (65%), Positives = 120/147 (81%), Gaps = 10/147 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAKKRG  IYAE L GS TCDAYH+T PHP+G G++ C+E+ALA +
Sbjct: 360 MGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALASA 419

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           G++KE +NYINAHA ST  GD++EYQA          L++NSTKS+IGHLLGA+GA EAV
Sbjct: 420 GISKEQINYINAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGAAGAVEAV 479

Query: 111 ATIKAIQTGWIHPNLNLENPDKHVLSR 137
           AT++AI+TGW+HPN+NLENPD  V ++
Sbjct: 480 ATVQAIRTGWVHPNINLENPDSGVDTK 506

Essential protein that catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-16 and C-16 to unsaturated C-18 fatty acids. Confers resistance to low temperatures by maintaining chloroplast membranes integrity. Involved in the regulation of fatty acids ratios during seed metabolism. Required for embryo development, especially at the transition from the globular to the heart stage.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1

>sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2

 Score =  163 bits (413), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 78/144 (54%), Positives = 105/144 (72%), Gaps = 10/144 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVL++E LEHA KRG  I AE L G++ CDA+H+T P  +G+G+ SC+E+ L  +
Sbjct: 292 MGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDA 351

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GV+ E+VNYINAHA ST  GDL E  A          +++N+TKS+IGH LGA+G  EA+
Sbjct: 352 GVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLEAI 411

Query: 111 ATIKAIQTGWIHPNLNLENPDKHV 134
           AT+KAI TGW+HP++N  NP++ V
Sbjct: 412 ATVKAINTGWLHPSINQFNPEQAV 435

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1

 Score =  160 bits (406), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 79/144 (54%), Positives = 102/144 (70%), Gaps = 10/144 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVL++E LEHA KR   I AE L G++ CDAYH+T P  +G+G+ SC+  +L  +
Sbjct: 281 MGEGAGVLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRDA 340

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GVA E+VNYINAHA ST  GDL E +A          +++NSTKS+IGH LGA+G  EA+
Sbjct: 341 GVAPEEVNYINAHATSTLAGDLAEVRAIKQVFKNPSEIKINSTKSMIGHCLGAAGGLEAI 400

Query: 111 ATIKAIQTGWIHPNLNLENPDKHV 134
           ATIK+I TGW+HP +N  NP+  V
Sbjct: 401 ATIKSITTGWVHPTINQFNPEPEV 424

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1

 Score =  137 bits (345), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/158 (48%), Positives = 97/158 (61%), Gaps = 12/158 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEG+G+L+LEELE A  RG  IY E++  ++TCDAYHITAP P+G G    +  AL  S
Sbjct: 235 MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDS 294

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           G+  E V+YINAH  ST   D+ E +A++           ++STKS+ GHLLG SG  EA
Sbjct: 295 GLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEA 354

Query: 110 VATIKAIQTGWIHPNLNLENPDKHV-LSRTSGASAAFI 146
           VAT+ AI    + P +NLENPD    L    G S A I
Sbjct: 355 VATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALI 392

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1

 Score =  131 bits (330), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/144 (46%), Positives = 93/144 (64%), Gaps = 11/144 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+++LEELEHA  RG  IY EI+    T DAYHITAP  +G G    M++A+  +
Sbjct: 231 MGEGAGIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDA 290

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           G+A E+++YINAH  ST   D  E  A++           ++STKS+ GHLLGA+G  EA
Sbjct: 291 GIAPEEIDYINAHGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAGGIEA 350

Query: 110 VATIKAIQTGWIHPNLNLENPDKH 133
           + +I AI+ G I P +N++ PD+ 
Sbjct: 351 IFSILAIKEGVIPPTINIQTPDEE 374

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti (strain 1021) GN=fabF PE=3 SV=2

 Score =  131 bits (330), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/141 (49%), Positives = 92/141 (65%), Gaps = 12/141 (8%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+++LEELEHA+ RG  IYAE++   L+ DA+HITAP  +G G   CM+ AL ++
Sbjct: 239 MGEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQMALKRA 298

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           GV   D++YINAH  ST + D  E  A+            M+STKS IGHLLGA+GA EA
Sbjct: 299 GVTAADIDYINAHGTST-MADTIELGAVERLVGDSASRISMSSTKSAIGHLLGAAGAVEA 357

Query: 110 VATIKAIQTGWIHPNLNLENP 130
           + +  AI+     P LNL+NP
Sbjct: 358 IFSALAIRDNIAPPTLNLDNP 378

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Rhizobium meliloti (strain 1021) (taxid: 266834)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1

 Score =  131 bits (330), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 93/143 (65%), Gaps = 11/143 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +GEGA  +++EELEHAKKR   IYAEI+   ++ DAYH+T P PE  G  +CM+ +L  +
Sbjct: 232 LGEGAACVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDA 291

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           G+A E V+YINAH  ST   D  E +A++           ++STKS+ GH+LGA+GA E 
Sbjct: 292 GIAPERVDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALET 351

Query: 110 VATIKAIQTGWIHPNLNLENPDK 132
           V ++ AI+     P +NLENPD+
Sbjct: 352 VISVLAIRDNTAPPTINLENPDE 374

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q5TKS0|FABF_STAAU 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) OS=Staphylococcus aureus GN=fabF PE=3 SV=1

 Score =  129 bits (323), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/142 (47%), Positives = 91/142 (64%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+L++E LE A+ RG NIYAEI+    T DAYHITAP PEG G    M+ A+  +
Sbjct: 225 MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDA 284

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           G+  +DV Y+NAH  ST +GDL E +A           L+++STKS+ GHLLGA+G  EA
Sbjct: 285 GIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEA 344

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           + +  +I+   I P ++   PD
Sbjct: 345 IFSALSIKDSKIAPTIHAVTPD 366

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Staphylococcus aureus (taxid: 1280)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q6GIA3|FABF_STAAR 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MRSA252) GN=fabF PE=3 SV=1

 Score =  128 bits (322), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 91/142 (64%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+L++E LE A+ RG NIYAEI+    T DAYHITAP PEG G    M+ A+  +
Sbjct: 232 MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDA 291

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           G+  +DV Y+NAH  ST +GDL E +A           L+++STKS+ GHLLGA+G  EA
Sbjct: 292 GIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEA 351

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           + +  +I+   + P ++   PD
Sbjct: 352 IFSALSIKDSKVAPTIHAVTPD 373

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Staphylococcus aureus (strain MRSA252) (taxid: 282458)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q7A6F8|FABF_STAAN 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain N315) GN=fabF PE=1 SV=1

 Score =  128 bits (322), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 91/142 (64%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+L++E LE A+ RG NIYAEI+    T DAYHITAP PEG G    M+ A+  +
Sbjct: 232 MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDA 291

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           G+  +DV Y+NAH  ST +GDL E +A           L+++STKS+ GHLLGA+G  EA
Sbjct: 292 GIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEA 351

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           + +  +I+   + P ++   PD
Sbjct: 352 IFSALSIKDSKVAPTIHAVTPD 373

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Staphylococcus aureus (strain N315) (taxid: 158879)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
297742964	546	unnamed protein product [Vitis vinifera]	0.650	0.245	0.743	1e-56
359482462	600	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	0.650	0.223	0.743	1e-56
147769102	664	hypothetical protein VITISV_027246 [Viti	0.655	0.203	0.737	2e-56
357479365	491	3-oxoacyl-ACP synthase [Medicago truncat	0.665	0.279	0.700	2e-55
217074824	491	unknown [Medicago truncatula]	0.665	0.279	0.700	2e-55
30795125	573	beta-ketoacyl-ACP synthase II [Elaeis gu	0.650	0.233	0.722	1e-54
1698690	540	beta-ketoacyl-ACP synthase II [Cuphea wr	0.650	0.248	0.708	5e-54
294666	535	chloroplast beta-ketoacyl-ACP synthase p	0.665	0.256	0.693	8e-54
255550355	554	46 kDa ketoavyl-ACP synthase [Ricinus co	0.665	0.247	0.693	8e-54
1698688	517	beta-ketoacyl-ACP synthase II [Cuphea wr	0.820	0.326	0.595	8e-54

>gi|297742964|emb|CBI35831.3| unnamed protein product [Vitis vinifera]

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/144 (74%), Positives = 122/144 (84%), Gaps = 10/144 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAK+RG NIYAE L GS TCDAYH+T PHPEG G+V C+EKALA++
Sbjct: 365 MGEGAGVLLLEELEHAKRRGANIYAEFLGGSFTCDAYHMTEPHPEGTGVVLCIEKALAQA 424

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GVA+EDVNYINAHA ST  GDL+E+QA          LR+NSTKS+IGHLLGASGA EAV
Sbjct: 425 GVAREDVNYINAHATSTPSGDLKEFQALIRCFGQNPKLRVNSTKSMIGHLLGASGAVEAV 484

Query: 111 ATIKAIQTGWIHPNLNLENPDKHV 134
           AT+KAIQTGW+HPN+NLENPD+ V
Sbjct: 485 ATVKAIQTGWVHPNINLENPDQGV 508

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482462|ref|XP_002272201.2| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera]

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/144 (74%), Positives = 122/144 (84%), Gaps = 10/144 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAK+RG NIYAE L GS TCDAYH+T PHPEG G+V C+EKALA++
Sbjct: 419 MGEGAGVLLLEELEHAKRRGANIYAEFLGGSFTCDAYHMTEPHPEGTGVVLCIEKALAQA 478

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GVA+EDVNYINAHA ST  GDL+E+QA          LR+NSTKS+IGHLLGASGA EAV
Sbjct: 479 GVAREDVNYINAHATSTPSGDLKEFQALIRCFGQNPKLRVNSTKSMIGHLLGASGAVEAV 538

Query: 111 ATIKAIQTGWIHPNLNLENPDKHV 134
           AT+KAIQTGW+HPN+NLENPD+ V
Sbjct: 539 ATVKAIQTGWVHPNINLENPDQGV 562

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class: N/A

Phylum: Streptophyta

>gi|147769102|emb|CAN69528.1| hypothetical protein VITISV_027246 [Vitis vinifera]

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 107/145 (73%), Positives = 122/145 (84%), Gaps = 10/145 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAK+RG NIYAE L GS TCDAYH+T PHPEG G+V C+EKALA++
Sbjct: 447 MGEGAGVLLLEELEHAKRRGANIYAEFLGGSFTCDAYHMTEPHPEGTGVVLCIEKALAQA 506

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GVA+EDVNYINAHA ST  GDL+E+QA          LR+NSTKS+IGHLLGASGA EAV
Sbjct: 507 GVAREDVNYINAHATSTPSGDLKEFQALIRCFGQNPKLRVNSTKSMIGHLLGASGAVEAV 566

Query: 111 ATIKAIQTGWIHPNLNLENPDKHVL 135
           AT+KAIQTGW+HPN+NLENPD+ V 
Sbjct: 567 ATVKAIQTGWVHPNINLENPDQGVF 591

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357479365|ref|XP_003609968.1| 3-oxoacyl-ACP synthase [Medicago truncatula] gi|355511023|gb|AES92165.1| 3-oxoacyl-ACP synthase [Medicago truncatula]

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/147 (70%), Positives = 122/147 (82%), Gaps = 10/147 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVL+LEELEHAKKRG NIYAE L GS TCDAYH+T PHP+G G++ C+E+AL +S
Sbjct: 310 MGEGAGVLVLEELEHAKKRGANIYAEFLGGSFTCDAYHVTEPHPDGAGVILCIERALVQS 369

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GV+KEDVNYINAHA ST  GDL+EYQA          LR+NSTKS+IGHLLGASG  EAV
Sbjct: 370 GVSKEDVNYINAHATSTPSGDLKEYQALIHCFGKNPELRVNSTKSMIGHLLGASGGVEAV 429

Query: 111 ATIKAIQTGWIHPNLNLENPDKHVLSR 137
           AT++AI+TGW+HPN+NLENPDK V ++
Sbjct: 430 ATVQAIRTGWVHPNINLENPDKDVDTK 456

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074824|gb|ACJ85772.1| unknown [Medicago truncatula]

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/147 (70%), Positives = 122/147 (82%), Gaps = 10/147 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVL+LEELEHAKKRG NIYAE L GS TCDAYH+T PHP+G G++ C+E+AL +S
Sbjct: 310 MGEGAGVLVLEELEHAKKRGANIYAEFLGGSFTCDAYHVTEPHPDGAGVILCIERALVQS 369

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GV+KEDVNYINAHA ST  GDL+EYQA          LR+NSTKS+IGHLLGASG  EAV
Sbjct: 370 GVSKEDVNYINAHATSTPSGDLKEYQALIHCFGKNPELRVNSTKSMIGHLLGASGGVEAV 429

Query: 111 ATIKAIQTGWIHPNLNLENPDKHVLSR 137
           AT++AI+TGW+HPN+NLENPDK V ++
Sbjct: 430 ATVQAIRTGWVHPNINLENPDKDVDTK 456

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30795125|gb|AAF26738.2|AF220453_1 beta-ketoacyl-ACP synthase II [Elaeis guineensis]

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 104/144 (72%), Positives = 119/144 (82%), Gaps = 10/144 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAK+RG NIYAE L GS TCDAYH+T PHPEG G+  C+E ALA++
Sbjct: 384 MGEGAGVLLLEELEHAKQRGANIYAEFLGGSFTCDAYHMTEPHPEGAGIALCIENALAQA 443

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GVAKEDVNY+NAHA ST  GDL+EYQA          LR+NSTKS+IGHLLGASGA EAV
Sbjct: 444 GVAKEDVNYVNAHATSTPAGDLKEYQALIRCFGQNPELRVNSTKSMIGHLLGASGAVEAV 503

Query: 111 ATIKAIQTGWIHPNLNLENPDKHV 134
           A I+AI+TGW+HPN+NLENP+K V
Sbjct: 504 AAIQAIRTGWVHPNVNLENPEKSV 527

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1698690|gb|AAB37271.1| beta-ketoacyl-ACP synthase II [Cuphea wrightii]

 Score =  216 bits (549), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 102/144 (70%), Positives = 118/144 (81%), Gaps = 10/144 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAKKRG  IYAE L GS TCDAYH+T PHPEG G++ C+EKALA++
Sbjct: 358 MGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQA 417

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GV+KEDVNYINAHA ST  GD++EYQA          LR+NSTKS+IGHLLGA+G  EAV
Sbjct: 418 GVSKEDVNYINAHATSTSAGDIKEYQALARCFGQNSELRVNSTKSMIGHLLGAAGGVEAV 477

Query: 111 ATIKAIQTGWIHPNLNLENPDKHV 134
             ++AI+TGWIHPNLNLE+PDK V
Sbjct: 478 TVVQAIRTGWIHPNLNLEDPDKAV 501

Source: Cuphea wrightii

Species: Cuphea wrightii

Genus: Cuphea

Family: Lythraceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294666|gb|AAA33872.1| chloroplast beta-ketoacyl-ACP synthase precursor [Ricinus communis] gi|148645269|gb|ABR01158.1| plastid 3-keto-acyl-ACP synthase II [Ricinus communis]

 Score =  215 bits (548), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 102/147 (69%), Positives = 124/147 (84%), Gaps = 10/147 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAKKRG NIYAE L GS TCDAYH+T P P+GVG++ C+EKALA+S
Sbjct: 354 MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPDGVGVILCIEKALARS 413

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GV+KE+VNYINAHA ST  GDL+EY+A          LR+NSTKS+IGHLLGA+GA EA+
Sbjct: 414 GVSKEEVNYINAHATSTPAGDLKEYEALMRCFSQNPDLRVNSTKSMIGHLLGAAGAVEAI 473

Query: 111 ATIKAIQTGWIHPNLNLENPDKHVLSR 137
           ATI+AI+TGW+HPN+NLENP++ V ++
Sbjct: 474 ATIQAIRTGWVHPNINLENPEEGVDTK 500

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550355|ref|XP_002516228.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] gi|223544714|gb|EEF46230.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis]

 Score =  215 bits (548), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 102/147 (69%), Positives = 124/147 (84%), Gaps = 10/147 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAKKRG NIYAE L GS TCDAYH+T P P+GVG++ C+EKALA+S
Sbjct: 373 MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPDGVGVILCIEKALARS 432

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GV+KE+VNYINAHA ST  GDL+EY+A          LR+NSTKS+IGHLLGA+GA EA+
Sbjct: 433 GVSKEEVNYINAHATSTPAGDLKEYEALMRCFSQNPDLRVNSTKSMIGHLLGAAGAVEAI 492

Query: 111 ATIKAIQTGWIHPNLNLENPDKHVLSR 137
           ATI+AI+TGW+HPN+NLENP++ V ++
Sbjct: 493 ATIQAIRTGWVHPNINLENPEEGVDTK 519

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1698688|gb|AAB37270.1| beta-ketoacyl-ACP synthase II [Cuphea wrightii]

 Score =  215 bits (548), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 112/188 (59%), Positives = 133/188 (70%), Gaps = 19/188 (10%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAKKRG  IYAE L GS TCDAYH+T PHPEG G++ C+E+ALA+S
Sbjct: 336 MGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIERALAQS 395

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GV+KEDVNYINAHA ST  GD++EYQA          LR+NSTKS+IGHLLGA+G  EAV
Sbjct: 396 GVSKEDVNYINAHATSTPAGDIKEYQALARIFSQNSELRVNSTKSMIGHLLGAAGGVEAV 455

Query: 111 ATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLI-SFN-GSFL 168
             ++AI+TGWIHPN+NLENPD        G  A  +  P  ++ K +  L  SF  G   
Sbjct: 456 TVVQAIRTGWIHPNINLENPD-------DGVDAKLLVGPKKEKLKVKVGLSNSFGFGGHN 508

Query: 169 SSLYMASC 176
           SS+  A C
Sbjct: 509 SSILFAPC 516

Source: Cuphea wrightii

Species: Cuphea wrightii

Genus: Cuphea

Family: Lythraceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
TAIR|locus:2027252	541	FAB1 "fatty acid biosynthesis	0.582	0.221	0.638	3.5e-43
CGD|CAL0003432	441	CEM1 [Candida albicans (taxid:	0.776	0.362	0.410	5.8e-25
TIGR_CMR|ECH_0882	422	ECH_0882 "3-oxoacyl-(acyl-carr	0.548	0.267	0.491	6.6e-25
TIGR_CMR|APH_0930	423	APH_0930 "3-oxoacyl-(acyl-carr	0.558	0.271	0.476	2e-24
TIGR_CMR|GSU_1605	410	GSU_1605 "3-oxoacyl-(acyl-carr	0.563	0.282	0.488	2.6e-24
TIGR_CMR|CBU_0497	414	CBU_0497 "3-oxoacyl-acyl carri	0.572	0.285	0.449	3.7e-24
TIGR_CMR|NSE_0453	415	NSE_0453 "3-oxoacyl-(acyl-carr	0.728	0.361	0.383	2e-23
UNIPROTKB|E1BYY7	461	OXSM "3-oxoacyl-[acyl-carrier-	0.567	0.253	0.476	5.1e-23
UNIPROTKB|Q81JF9	412	fabF "3-oxoacyl-[acyl-carrier-	0.567	0.283	0.468	7.3e-23
TIGR_CMR|BA_1185	412	BA_1185 "3-oxoacyl-(acyl-carri	0.567	0.283	0.468	7.3e-23

TAIR|locus:2027252 FAB1 "fatty acid biosynthesis 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 83/130 (63%), Positives = 104/130 (80%)

Query:    15 HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
             HAKKRG  IYAE L GS TCDAYH+T PHP+G G++ C+E+ALA +G++KE +NYINAHA
Sbjct:   374 HAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALASAGISKEQINYINAHA 433

Query:    75 PSTRLGDLREYQAL----------RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
              ST  GD++EYQAL          ++NSTKS+IGHLLGA+GA EAVAT++AI+TGW+HPN
Sbjct:   434 TSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGAAGAVEAVATVQAIRTGWVHPN 493

Query:   125 LNLENPDKHV 134
             +NLENPD  V
Sbjct:   494 INLENPDSGV 503

GO:0003824 "catalytic activity" evidence=IEA

GO:0004312 "fatty acid synthase activity" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA;TAS

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0009536 "plastid" evidence=ISS

GO:0009631 "cold acclimation" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

CGD|CAL0003432 CEM1 [Candida albicans (taxid:5476)]

 Score = 286 (105.7 bits), Expect = 5.8e-25, P = 5.8e-25
 Identities = 71/173 (41%), Positives = 98/173 (56%)

Query:    15 HAKKRGTN---IYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYIN 71
             HA +RG     IY EIL   ++ DAYHITAPH +G G  + M +A+ +SG+  E ++Y+N
Sbjct:   265 HALERGVTPDQIYGEILGYGVSGDAYHITAPHEDGTGAYNAMNQAIERSGIDPEQIDYVN 324

Query:    72 AHAPSTRLGDLREYQAL---------RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIH 122
             AHA ST +GD  E  A+         +++STKS IGHLLGA+GA E++ T+ AI+TG I 
Sbjct:   325 AHATSTVIGDRAENNAMMRLFNPQKTKVSSTKSSIGHLLGAAGAVESIFTLNAIKTGQIP 384

Query:   123 PNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFN-GSFLSSLYMA 174
               LNL+N  +H     S     +++   I       V  SF  G   SSL  A
Sbjct:   385 ATLNLDNVGQHEGDEQSQFKFDYVANKSITMDVNYAVCNSFGFGGVNSSLCFA 437

GO:0005739 "mitochondrion" evidence=IEA

TIGR_CMR|ECH_0882 ECH_0882 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)]

 Score = 284 (105.0 bits), Expect = 6.6e-25, P = 6.6e-25
 Identities = 61/124 (49%), Positives = 80/124 (64%)

Query:    15 HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
             HAKKRG  IY E+L   +T DAYH++APHPEG G +  +E AL+ + +  E +NYINAH 
Sbjct:   256 HAKKRGARIYGELLGYGMTSDAYHMSAPHPEGKGGIKSIELALSNAQLNPESINYINAHG 315

Query:    75 PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
              ST +GD  E QA++           ++STKS IGHLLGA+G+ EA+  I A+ TG   P
Sbjct:   316 TSTPIGDSIEIQAIKNVFKESVYKVPISSTKSSIGHLLGAAGSVEAIFCILAMNTGIAPP 375

Query:   124 NLNL 127
              LNL
Sbjct:   376 TLNL 379

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|APH_0930 APH_0930 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Anaplasma phagocytophilum HZ (taxid:212042)]

 Score = 280 (103.6 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 60/126 (47%), Positives = 81/126 (64%)

Query:    15 HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
             +AKKRG  IYAE+    LT DAYHITAPHP+G G +  ME AL  + ++  +++YINAH 
Sbjct:   257 YAKKRGARIYAELTGYGLTADAYHITAPHPQGEGGMRAMEMALRTANISPSEIDYINAHG 316

Query:    75 PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
              ST  GD  E  A++           ++STKS IGHLLGA+G+ EA+ ++ A+Q G + P
Sbjct:   317 TSTPTGDSVEIVAIKNLFQDHAYKVAISSTKSSIGHLLGAAGSVEAIFSMLALQHGVLPP 376

Query:   124 NLNLEN 129
              LNL N
Sbjct:   377 TLNLHN 382

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|GSU_1605 GSU_1605 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 62/127 (48%), Positives = 78/127 (61%)

Query:    16 AKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
             AKKRG  IYAEI+   LT DAYH+TAP PEG G   CM+ AL  +GV  E+V+YINAH  
Sbjct:   245 AKKRGAKIYAEIVGYGLTGDAYHLTAPAPEGEGAARCMKMALNNAGVRPEEVDYINAHGT 304

Query:    76 STRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
             ST   D  E  A++           ++STKS+ GHLLGA+G  EAV T+ A+  G I P 
Sbjct:   305 STPFNDYYETLAVKSVFGDYAKKVMVSSTKSMTGHLLGAAGGVEAVFTLMAMDKGVIPPT 364

Query:   125 LNLENPD 131
             +N +  D
Sbjct:   365 INYQEQD 371

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|CBU_0497 CBU_0497 "3-oxoacyl-acyl carrier protein synthase II" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 277 (102.6 bits), Expect = 3.7e-24, P = 3.7e-24
 Identities = 58/129 (44%), Positives = 81/129 (62%)

Query:    15 HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
             HAKKR   IYAEI+   ++ DAYH+T P PE  G  +CM+ +L  +G+A E V+YINAH 
Sbjct:   246 HAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPERVDYINAHG 305

Query:    75 PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
              ST   D  E +A++           ++STKS+ GH+LGA+GA E V ++ AI+     P
Sbjct:   306 TSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVISVLAIRDNTAPP 365

Query:   124 NLNLENPDK 132
              +NLENPD+
Sbjct:   366 TINLENPDE 374

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|NSE_0453 NSE_0453 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Neorickettsia sennetsu str. Miyayama (taxid:222891)]

 Score = 271 (100.5 bits), Expect = 2.0e-23, P = 2.0e-23
 Identities = 66/172 (38%), Positives = 97/172 (56%)

Query:    15 HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
             HAK+RG  IYAE++   ++ DAYH+ AP+P G G ++ M  A+  +G+  ++++YINAH 
Sbjct:   248 HAKRRGARIYAELVGFGVSGDAYHVAAPNPNGDGALAAMASAIKMAGIGLDEIDYINAHG 307

Query:    75 PSTRLGDLREYQALR----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
              ST  GD  E  ALR          ++STKS IGH LGA+G  EAV  + A++   + P 
Sbjct:   308 TSTPNGDAAELNALRRLFGSSLGMGVSSTKSSIGHALGAAGGIEAVLCVLAMRDSVMPPT 367

Query:   125 LNLENPDKHVLSRTSGASAAFISIPVIKQFKT-RFVL---ISFNGSFLSSLY 172
             LNL+ PD          ++ F  +P   Q K  R+VL     F G+ +S L+
Sbjct:   368 LNLDKPDD--------CASGFNLVPHTSQEKNLRYVLSNSFGFGGTNVSLLF 411

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|E1BYY7 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase" [Gallus gallus (taxid:9031)]

 Score = 270 (100.1 bits), Expect = 5.1e-23, P = 5.1e-23
 Identities = 61/128 (47%), Positives = 76/128 (59%)

Query:    15 HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
             HA +RG  IYAE+L   L+ DA HITAP+PEG G   CM  A+  SG+  EDV Y+NAHA
Sbjct:   292 HAVQRGARIYAEVLGYGLSGDACHITAPNPEGDGAFRCMSAAIKDSGIKPEDVTYVNAHA 351

Query:    75 PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
              ST LGD  E QA++           ++STK   GHLLGA+GA EA  T  +     + P
Sbjct:   352 TSTPLGDAAENQAIKKLFKSHSHNIAVSSTKGATGHLLGAAGAIEAAFTALSCYHAILPP 411

Query:   124 NLNLENPD 131
              LNLE  +
Sbjct:   412 TLNLEKTE 419

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0005739 "mitochondrion" evidence=IEA

GO:0006637 "acyl-CoA metabolic process" evidence=IEA

GO:0051790 "short-chain fatty acid biosynthetic process" evidence=IEA

GO:0051792 "medium-chain fatty acid biosynthetic process" evidence=IEA

UNIPROTKB|Q81JF9 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Bacillus anthracis (taxid:1392)]

 Score = 266 (98.7 bits), Expect = 7.3e-23, P = 7.3e-23
 Identities = 60/128 (46%), Positives = 78/128 (60%)

Query:    15 HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
             HA  RG +IYAEI     T DA+HIT P P G G V  M +ALA +G+  ED++YINAH 
Sbjct:   245 HALARGAHIYAEIAGYGATGDAFHITMPAPGGEGGVRAMRQALADAGLQPEDIDYINAHG 304

Query:    75 PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
              ST   +  E  A++           ++STKS+ GHLLGA+GA EA+ +IK+I  G I P
Sbjct:   305 TSTDANEKYETMAIKETFGEHAYKVAISSTKSMTGHLLGAAGAVEAIFSIKSITDGVIPP 364

Query:   124 NLNLENPD 131
              +N E PD
Sbjct:   365 TINYETPD 372

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|BA_1185 BA_1185 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 266 (98.7 bits), Expect = 7.3e-23, P = 7.3e-23
 Identities = 60/128 (46%), Positives = 78/128 (60%)

Query:    15 HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
             HA  RG +IYAEI     T DA+HIT P P G G V  M +ALA +G+  ED++YINAH 
Sbjct:   245 HALARGAHIYAEIAGYGATGDAFHITMPAPGGEGGVRAMRQALADAGLQPEDIDYINAHG 304

Query:    75 PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
              ST   +  E  A++           ++STKS+ GHLLGA+GA EA+ +IK+I  G I P
Sbjct:   305 TSTDANEKYETMAIKETFGEHAYKVAISSTKSMTGHLLGAAGAVEAIFSIKSITDGVIPP 364

Query:   124 NLNLENPD 131
              +N E PD
Sbjct:   365 TINYETPD 372

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00034037001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (502 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00024012001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (392 aa)	•	•	•	•		•	•		0.991
	GSVIVG00007299001	SubName- Full=Chromosome chr2 scaffold_187, whole genome shotgun sequence; (431 aa)	•		•	•		•	•		0.990
	GSVIVG00024709001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (393 aa)				•		•	•		0.919
	GSVIVG00017895001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (269 aa)	•					•			0.910
	GSVIVG00035074001	SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (269 aa)	•					•			0.910
	GSVIVG00025373001	SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (369 aa)						•	•		0.909
	GSVIVG00016807001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (421 aa)						•	•		0.904
	GSVIVG00017969001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (374 aa)						•	•		0.900
	GSVIVG00034687001	RecName- Full=Acyl-[acyl-carrier protein] desaturase; EC=1.14.19.2;; Converts stearoyl-ACP to o [...] (392 aa)						•			0.899
	GSVIVG00034686001	SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence; (262 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	206
PLN02787	540	PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei	1e-76
cd00834	406	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot	9e-69
TIGR03150	407	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei	9e-67
PRK07314	411	PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei	3e-63
COG0304	412	COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy	2e-59
PRK06333	424	PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei	3e-57
PTZ00050	421	PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein	1e-53
PLN02836	437	PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei	2e-46
PRK09116	405	PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei	3e-41
PRK08439	406	PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei	1e-36
pfam02801	119	pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase	3e-36
PRK07910	418	PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei	4e-36
PRK08722	414	PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei	3e-34
PRK07103	410	PRK07103, PRK07103, polyketide beta-ketoacyl:acyl	4e-34
PRK07967	406	PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei	5e-32
PRK05952	381	PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei	5e-32
PRK06501	425	PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei	8e-31
PRK14691	342	PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei	9e-30
cd00833	421	cd00833, PKS, polyketide synthases (PKSs) polymeri	6e-27
cd00828	407	cd00828, elong_cond_enzymes, "elongating" condensi	1e-24
PRK09185	392	PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei	7e-24
cd00825	332	cd00825, decarbox_cond_enzymes, decarboxylating co	3e-19
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	4e-18
COG3321	1061	COG3321, COG3321, Polyketide synthase modules and	1e-17
TIGR02813	2582	TIGR02813, omega_3_PfaA, polyketide-type polyunsat	7e-11
smart00825	298	smart00825, PKS_KS, Beta-ketoacyl synthase	3e-10
cd00832	399	cd00832, CLF, Chain-length factor (CLF) is a facto	8e-09
cd00751	386	cd00751, thiolase, Thiolase are ubiquitous enzymes	2e-04
PRK08131	401	PRK08131, PRK08131, acetyl-CoA acetyltransferase;	0.004

>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II

 Score =  239 bits (611), Expect = 1e-76
 Identities = 104/144 (72%), Positives = 122/144 (84%), Gaps = 10/144 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVLLLEELEHAKKRG NIYAE L GS TCDAYH+T PHPEG G++ C+EKALA+S
Sbjct: 359 MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQS 418

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAV 110
           GV+KEDVNYINAHA ST+ GDL+EYQA          LR+NSTKS+IGHLLGA+GA EA+
Sbjct: 419 GVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAI 478

Query: 111 ATIKAIQTGWIHPNLNLENPDKHV 134
           AT++AI+TGW+HPN+NLENP+  V
Sbjct: 479 ATVQAIRTGWVHPNINLENPESGV 502

Length = 540

>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

 Score =  215 bits (549), Expect = 9e-69
 Identities = 75/142 (52%), Positives = 97/142 (68%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +GEGAGVL+LE LEHAK RG  IYAEIL    + DAYHITAP P+G G    M  ALA +
Sbjct: 229 LGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADA 288

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           G++ ED++YINAH  ST L D  E +A++           ++STKS+ GHLLGA+GA EA
Sbjct: 289 GLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEA 348

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           +AT+ A++ G + P +NLE PD
Sbjct: 349 IATLLALRDGVLPPTINLEEPD 370

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406

>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II

 Score =  210 bits (536), Expect = 9e-67
 Identities = 77/142 (54%), Positives = 98/142 (69%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVL+LEELEHAK RG  IYAEI+   ++ DAYHITAP PEG G    M  AL  +
Sbjct: 229 MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDA 288

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           G+  EDV+YINAH  ST LGD  E +A++           ++STKS+ GHLLGA+GA EA
Sbjct: 289 GINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEA 348

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           + T+ A++ G + P +NL+NPD
Sbjct: 349 IFTVLALRDGIVPPTINLDNPD 370

3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407

>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  200 bits (512), Expect = 3e-63
 Identities = 73/142 (51%), Positives = 97/142 (68%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+L+LEELEHAK RG  IYAE++   +T DAYH+TAP P+G G    M+ AL  +
Sbjct: 230 MGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDA 289

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           G+  ED++YINAH  ST  GD  E QA++           ++STKS+ GHLLGA+GA EA
Sbjct: 290 GINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEA 349

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           + ++ AI+   I P +NL+NPD
Sbjct: 350 IFSVLAIRDQVIPPTINLDNPD 371

Length = 411

>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  190 bits (486), Expect = 2e-59
 Identities = 72/143 (50%), Positives = 93/143 (65%), Gaps = 11/143 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +GEGAG L+LEELEHA  RG  IYAEI+    T DAYHITAP P+G G +  M  ALA +
Sbjct: 230 IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADA 289

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           G+  ED++YINAH  ST   D  E  A++           ++STKSL GH LGA+GA EA
Sbjct: 290 GLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEA 349

Query: 110 VATIKAIQTGWIHPNLNLENPDK 132
           + ++ A++ G I P +NL+NPD 
Sbjct: 350 IISLLALRDGIIPPTINLDNPDP 372

Length = 412

>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  185 bits (473), Expect = 3e-57
 Identities = 65/141 (46%), Positives = 88/141 (62%), Gaps = 10/141 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+L++E LEHA  RG    AE++    + DAYH+TA   +G G    M  AL ++
Sbjct: 242 MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQA 301

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR----------MNSTKSLIGHLLGASGAAEAV 110
           G+  E+V ++NAHA ST +GDL E  A++          ++STKS  GHLLGA+G  EA+
Sbjct: 302 GIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAI 361

Query: 111 ATIKAIQTGWIHPNLNLENPD 131
            TI A++     P LNLENPD
Sbjct: 362 FTILALRDQIAPPTLNLENPD 382

Length = 424

>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional

 Score =  176 bits (448), Expect = 1e-53
 Identities = 72/145 (49%), Positives = 94/145 (64%), Gaps = 13/145 (8%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+L+LEELEHA +RG  IYAEI     + DA+HITAPHP+G G   CME AL   
Sbjct: 237 MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDG 296

Query: 61  G-VAKEDVNYINAHAPSTRLGDLREYQALR------------MNSTKSLIGHLLGASGAA 107
             +   DV+Y+NAHA ST +GD  E +A++            ++STK  +GHLLGA+GA 
Sbjct: 297 ANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAV 356

Query: 108 EAVATIKAIQTGWIHPNLNLENPDK 132
           E++ TI ++    I P +NLENPD 
Sbjct: 357 ESIVTILSLYEQIIPPTINLENPDA 381

Length = 421

>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase

 Score =  158 bits (400), Expect = 2e-46
 Identities = 72/144 (50%), Positives = 93/144 (64%), Gaps = 13/144 (9%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +GEGAGVL+LEELEHAK+RG  IYAE+    ++ DA+HIT PH +G G V  M +AL +S
Sbjct: 253 IGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQS 312

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-------------MNSTKSLIGHLLGASGAA 107
           G+    V+Y+NAHA ST LGD  E +A++              +STK   GHLLGA+GA 
Sbjct: 313 GLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAV 372

Query: 108 EAVATIKAIQTGWIHPNLNLENPD 131
           EA+ ++ AI  G   P LNLE PD
Sbjct: 373 EAIFSVLAIHHGIAPPTLNLERPD 396

Length = 437

>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  143 bits (363), Expect = 3e-41
 Identities = 67/138 (48%), Positives = 80/138 (57%), Gaps = 10/138 (7%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSG 61
           GEGAG L+LEELEHAK RG  IYAEI+      D  H+T P  E   M   ME AL  +G
Sbjct: 232 GEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAE--TMQIAMELALKDAG 289

Query: 62  VAKEDVNYINAHAPSTRLGDLREYQAL------RM--NSTKSLIGHLLGASGAAEAVATI 113
           +A ED+ Y+NAH  +T  GD+ E QA       RM  +S KS  GH LGA GA EA  +I
Sbjct: 290 LAPEDIGYVNAHGTATDRGDIAESQATAAVFGARMPISSLKSYFGHTLGACGALEAWMSI 349

Query: 114 KAIQTGWIHPNLNLENPD 131
           + +  GW  P LNL   D
Sbjct: 350 EMMNEGWFAPTLNLTQVD 367

Length = 405

>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  131 bits (332), Expect = 1e-36
 Identities = 68/142 (47%), Positives = 86/142 (60%), Gaps = 15/142 (10%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG L+LEE E AKKRG  IYAEI+    + DA HIT+P PEG   +  M+ AL  +
Sbjct: 230 MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGP--LRAMKAALEMA 287

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           G  K  ++YINAH  ST   D  E  AL+           ++STK  IGH LGA+GA EA
Sbjct: 288 GNPK--IDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEA 345

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           V +I A++ G + P +N E PD
Sbjct: 346 VISIMAMRDGILPPTINQETPD 367

Length = 406

>gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain

 Score =  122 bits (309), Expect = 3e-36
 Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 14/119 (11%)

Query: 24  YAEILDGSLTCD-AYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL 82
           YA I   ++  D A H     P G      +  ALA +G+  EDV+Y+ AH   T LGD 
Sbjct: 1   YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60

Query: 83  REYQALR-------------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLE 128
            E +AL+             + S KS IGHL  A+G A  +  + A++ G I P LNL+
Sbjct: 61  IEAEALKAVFGPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119

The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119

>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  130 bits (328), Expect = 4e-36
 Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 9/139 (6%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSG 61
           GEG  ++++E  EHAK RG NI A I+  S+T D +H+ AP P G      M +A+  +G
Sbjct: 241 GEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAG 300

Query: 62  VAKEDVNYINAHAPSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVAT 112
           +   D++++NAHA  T +GD+ E +A+          + + KS +GH +GA GA E++ T
Sbjct: 301 LTPGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVYAPKSALGHSVGAVGAVESILT 360

Query: 113 IKAIQTGWIHPNLNLENPD 131
           + A++ G I P LNLEN D
Sbjct: 361 VLALRDGVIPPTLNLENLD 379

Length = 418

>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  125 bits (315), Expect = 3e-34
 Identities = 58/144 (40%), Positives = 93/144 (64%), Gaps = 12/144 (8%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +G+GAG+++LEE EHAK RG  IYAE++   ++ DAYH+T+P  +G G    ME A+  +
Sbjct: 232 LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDA 291

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR------------MNSTKSLIGHLLGASGAAE 108
           GV  E + Y+NAH  ST  GD+ E + ++            ++STKS+ GHLLGA+G+ E
Sbjct: 292 GVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVE 351

Query: 109 AVATIKAIQTGWIHPNLNLENPDK 132
           A+ T+ ++    + P +NL++P++
Sbjct: 352 AIITVMSLVDQIVPPTINLDDPEE 375

Length = 414

>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

 Score =  125 bits (315), Expect = 4e-34
 Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 10/137 (7%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSG 61
           GE  G ++LE  E A++RG   YA++L  S+  DA     P  EG   +  +  AL ++G
Sbjct: 238 GEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEG--EMRVIRAALRRAG 295

Query: 62  VAKEDVNYINAHAPSTRLGDLREYQAL--------RMNSTKSLIGHLLGASGAAEAVATI 113
           +  ED++Y+N H   + LGD  E  AL         +N+TKSL GH L A+G  E +AT+
Sbjct: 296 LGPEDIDYVNPHGTGSPLGDETELAALFASGLAHAWINATKSLTGHGLSAAGIVELIATL 355

Query: 114 KAIQTGWIHPNLNLENP 130
             ++ G++HP+ NL+ P
Sbjct: 356 LQMRAGFLHPSRNLDEP 372

Length = 410

>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score =  119 bits (300), Expect = 5e-32
 Identities = 59/137 (43%), Positives = 83/137 (60%), Gaps = 14/137 (10%)

Query: 4   GAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVA 63
           G GV+++EELEHA  RG  IYAEI+    T D Y + AP  EG   V CM+ ALA   V 
Sbjct: 233 GGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGA--VRCMQMALA--TV- 287

Query: 64  KEDVNYINAHAPSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIK 114
              ++YIN H  ST +GD++E  A+R         +++TKSL GH LGA+G  EA+ ++ 
Sbjct: 288 DTPIDYINTHGTSTPVGDVKELGAIREVFGDKSPAISATKSLTGHSLGAAGVQEAIYSLL 347

Query: 115 AIQTGWIHPNLNLENPD 131
            ++ G+I P+ N+E  D
Sbjct: 348 MMEHGFIAPSANIEELD 364

Length = 406

>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  118 bits (298), Expect = 5e-32
 Identities = 57/139 (41%), Positives = 87/139 (62%), Gaps = 8/139 (5%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +GEG  +L+LE  E A+KRG  IY +IL   LTCDAYH++AP P+G   ++ +++ LA+S
Sbjct: 208 LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARS 267

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALRM--------NSTKSLIGHLLGASGAAEAVAT 112
           G+  ED++YI+AH  +TRL D RE   ++         +STK   GH LGASGA     +
Sbjct: 268 GLTPEDIDYIHAHGTATRLNDQREANLIQALFPHRVAVSSTKGATGHTLGASGALGVAFS 327

Query: 113 IKAIQTGWIHPNLNLENPD 131
           + A++   + P + L+ P+
Sbjct: 328 LLALRHQQLPPCVGLQEPE 346

Length = 381

>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  116 bits (292), Expect = 8e-31
 Identities = 57/142 (40%), Positives = 77/142 (54%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           M EGAG L+LE LE A  RG  I   +       D++H T   P+G   +  +  ALA +
Sbjct: 243 MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADA 302

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
           G+  E ++YINAH  ST   D  EY  L            ++S KS+IGH L A+GA EA
Sbjct: 303 GLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEA 362

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           V ++  IQTG + P +N +NPD
Sbjct: 363 VFSLLTIQTGRLPPTINYDNPD 384

Length = 425

>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

 Score =  112 bits (280), Expect = 9e-30
 Identities = 63/141 (44%), Positives = 87/141 (61%), Gaps = 10/141 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+L++EELEHA  RG    AEI+    + DAYH+T+   +G G    M+ AL ++
Sbjct: 160 MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQA 219

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR----------MNSTKSLIGHLLGASGAAEAV 110
           G+  E V ++NAHA ST +GDL E  A++          + STKS  GHLLGA+G  E +
Sbjct: 220 GITPEQVQHLNAHATSTPVGDLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETI 279

Query: 111 ATIKAIQTGWIHPNLNLENPD 131
            T+ A++   +   LNLENPD
Sbjct: 280 FTVLALRDQIVPATLNLENPD 300

Length = 342

>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

 Score =  105 bits (265), Expect = 6e-27
 Identities = 58/182 (31%), Positives = 83/182 (45%), Gaps = 21/182 (11%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAY--HITAPHPEGVGMVSCMEKALAK 59
           GEG GV++L+ L  A + G  IYA I   ++  D     ITAP  E     + + +A A+
Sbjct: 234 GEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEA--QAALIRRAYAR 291

Query: 60  SGVAKEDVNYINAHAPSTRLGDLREYQALRM--------------NSTKSLIGHLLGASG 105
           +GV   D++Y+ AH   T LGD  E +AL                 S KS IGHL  A+G
Sbjct: 292 AGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAG 351

Query: 106 AAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNG 165
            A  +  + A++ G I PNL+ E P+  +    S       + P       R   +S   
Sbjct: 352 LAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGPRRAGVS--- 408

Query: 166 SF 167
           SF
Sbjct: 409 SF 410

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421

>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

 Score = 99.1 bits (247), Expect = 1e-24
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 16/144 (11%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYH--ITAPHPEGVGMVSCMEKALA 58
             EGAGVL+LE  E A  RG  IY  +   + T D     + A      G+   +  ALA
Sbjct: 229 EAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGK---GIARAIRTALA 285

Query: 59  KSGVAKEDVNYINAHAPSTRLGDLREYQAL-----------RMNSTKSLIGHLLGASGAA 107
           K+G++ +D++ I+AH  ST   D+ E +A+            + + K+L GH  GA+GA 
Sbjct: 286 KAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGAL 345

Query: 108 EAVATIKAIQTGWIHPNLNLENPD 131
           + +  +++++ G I P  NL++ D
Sbjct: 346 QLIGALQSLEHGLIPPTANLDDVD 369

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407

>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score = 96.8 bits (242), Expect = 7e-24
 Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 15/138 (10%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSG 61
           GE A   LLE       R  +    +L    + DA+H++APHPEG+G +  M++ALA +G
Sbjct: 222 GEAAAFFLLE-------REDDAAVALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAG 274

Query: 62  VAKEDVNYINAHAPSTRLGDLREYQALR--------MNSTKSLIGHLLGASGAAEAVATI 113
           +A  D+ YIN H  +T L D  E +A+          +STK L GH LGA+GA EA    
Sbjct: 275 LAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKGLTGHTLGAAGAVEAAICW 334

Query: 114 KAIQTGWIHPNLNLENPD 131
            A++ G      N   PD
Sbjct: 335 LALRHGLPPHGWNTGQPD 352

Length = 392

>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

 Score = 83.5 bits (206), Expect = 3e-19
 Identities = 47/139 (33%), Positives = 81/139 (58%), Gaps = 9/139 (6%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSG 61
           G+GAG L++EELEHA  RG +IYAEI+  + T D   + A  P   G+    ++ALA +G
Sbjct: 160 GDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAG 219

Query: 62  VAKEDVNYINAHAPSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVAT 112
           +   D++Y+ AH   T +GD++E + LR         +++TK++ G+L  A+        
Sbjct: 220 LTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEA 279

Query: 113 IKAIQTGWIHPNLNLENPD 131
           +  ++ G+I P++++E  D
Sbjct: 280 VLMLEHGFIPPSIHIEELD 298

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score = 79.4 bits (196), Expect = 4e-18
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 12/132 (9%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCD-AYHITAPHPEGVGMVSCMEKALAKS 60
           G+GA   ++E  EHA +RG +  AEI+  + T D A  + A    G G+     KAL  +
Sbjct: 101 GDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAV--SGEGLARAARKALEGA 158

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVA 111
           G+   D++Y+ AH   T +GD  E              +++T  + GH LGA+G A    
Sbjct: 159 GLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDE 218

Query: 112 TIKAIQTGWIHP 123
            +  ++  +I P
Sbjct: 219 LLLMLEHEFIPP 230

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 80.2 bits (198), Expect = 1e-17
 Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 17/144 (11%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCD--AYHITAPHPEGVGMVSCMEKALAK 59
           GEGAGV++L+ L  A++ G  IYA I   ++  D  +  +TAP+ E       + +ALA 
Sbjct: 238 GEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEA--QADVIREALAD 295

Query: 60  SGVAKEDVNYINAHAPSTRLGDLREYQALRMN-------------STKSLIGHLLGASGA 106
           +G+    V Y+ AH   T LGD  E  AL                S KS IGHL  A+G 
Sbjct: 296 AGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGI 355

Query: 107 AEAVATIKAIQTGWIHPNLNLENP 130
           A  + T  A++ G+I P L+ + P
Sbjct: 356 AGLIKTALALKHGYIPPTLHFDTP 379

Length = 1061

>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA

 Score = 60.8 bits (147), Expect = 7e-11
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 18/147 (12%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAY--HITAPHPEGVGMVSCMEKALA 58
           +GEG G++ L+ LE A++ G  IYA I     + D     I AP PEG      +++A  
Sbjct: 269 IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEG--QAKALKRAYD 326

Query: 59  KSGVAKEDVNYINAHAPSTRLGDLREY--------------QALRMNSTKSLIGHLLGAS 104
            +G A      I AH   T  GD+ E+              Q + + S KS IGH    +
Sbjct: 327 DAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTA 386

Query: 105 GAAEAVATIKAIQTGWIHPNLNLENPD 131
           G A  +  + A+    + P +N++ P+
Sbjct: 387 GTAGMIKAVLALHHKVLPPTINVDQPN 413

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582

>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase

 Score = 58.1 bits (142), Expect = 3e-10
 Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 42/135 (31%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYH--ITAPHPEGVGMVSCMEKALAK 59
           GEG GV++L+ L  A + G  I A I   ++  D     ITAP                 
Sbjct: 161 GEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGITAPSGPA------------- 207

Query: 60  SGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTG 119
                                     Q L + S KS IGHL  A+G A  +  + A++ G
Sbjct: 208 --------------------------Q-LLIGSVKSNIGHLEAAAGVAGLIKVVLALKHG 240

Query: 120 WIHPNLNLENPDKHV 134
            I P L+ E P+ H+
Sbjct: 241 VIPPTLHFETPNPHI 255

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298

>gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

 Score = 53.9 bits (130), Expect = 8e-09
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 14/140 (10%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHP-EGVGMVSCMEKALAKS 60
           GEG  +L+LE+   A++RG  +Y EI   + T D      P      G+   +  ALA +
Sbjct: 228 GEGGAILVLEDAAAARERGARVYGEIAGYAATFDP----PPGSGRPPGLARAIRLALADA 283

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVA 111
           G+  EDV+ + A A      D  E  AL          + + K++ G L       +   
Sbjct: 284 GLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVAT 343

Query: 112 TIKAIQTGWIHPNLNLENPD 131
            + A++ G I P +N+ +  
Sbjct: 344 ALLALRDGVIPPTVNVTDVP 363

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399

>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score = 41.3 bits (98), Expect = 2e-04
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 17/112 (15%)

Query: 4   GAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPE--GVGMVSCMEKALAKSG 61
           GA  +LL   E AK+ G    A I+        Y +    P   G+G V  + KAL ++G
Sbjct: 247 GAAAVLLMSEEKAKELGLKPLARIV-------GYAVAGVDPAIMGIGPVPAIPKALKRAG 299

Query: 62  VAKEDVNYI---NAHAPSTRLGDLREYQ--ALRMNSTKSLI--GHLLGASGA 106
           +  +D++ I    A A    L  L+E      ++N     I  GH LGASGA
Sbjct: 300 LTLDDIDLIEINEAFAAQA-LACLKELGLDPEKVNVNGGAIALGHPLGASGA 350

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386

>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 13/123 (10%)

Query: 3   EGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGV 62
           +GA  LL+      +K G    A IL       A     P   G+G V  ++KALA++G+
Sbjct: 257 DGAAALLIGSRAAGEKYGLKPMARILSS-----AAAGVEPRIMGIGPVEAIKKALARAGL 311

Query: 63  AKEDVNYI--NAHAPSTRLGDLR----EYQALRMNSTKSLI--GHLLGASGAAEAVATIK 114
             +D++ I  N    S  LG L+    ++   R+N     I  GH LGASGA  A+   +
Sbjct: 312 TLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAAR 371

Query: 115 AIQ 117
            +Q
Sbjct: 372 ELQ 374

Length = 401

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	206
COG3321	1061	Polyketide synthase modules and related proteins [	100.0
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	100.0
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	100.0
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	100.0
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	100.0
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	100.0
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
KOG1394	440	consensus 3-oxoacyl-(acyl-carrier-protein) synthas	100.0
cd00832	399	CLF Chain-length factor (CLF) is a factor required	100.0
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	100.0
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	100.0
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	100.0
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	100.0
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	100.0
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	100.0
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	100.0
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.98
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.98
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.96
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	99.94
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	99.9
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	99.85
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.78
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	99.6
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	99.56
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	99.56
PRK05790	393	putative acyltransferase; Provisional	99.51
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	99.47
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	99.47
PLN02644	394	acetyl-CoA C-acetyltransferase	99.45
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	99.44
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	99.44
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	99.43
PRK09051	394	beta-ketothiolase; Provisional	99.42
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	99.41
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	99.4
PRK08242	402	acetyl-CoA acetyltransferase; Validated	99.38
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	99.35
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	99.34
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	99.33
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	99.33
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	99.33
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	99.32
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.32
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	99.32
PLN02287	452	3-ketoacyl-CoA thiolase	99.32
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	99.3
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	99.3
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	99.29
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	99.27
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	99.26
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	99.25
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	99.19
PRK06158	384	thiolase; Provisional	99.18
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	99.15
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	99.13
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	99.12
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	99.12
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	99.1
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	99.09
PRK08256	391	lipid-transfer protein; Provisional	99.07
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	99.06
KOG1390	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	99.05
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	99.05
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	99.05
PRK06059	399	lipid-transfer protein; Provisional	99.03
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	98.98
PRK06157	398	acetyl-CoA acetyltransferase; Validated	98.97
PRK07937	352	lipid-transfer protein; Provisional	98.97
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	98.96
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	98.9
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	98.9
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	98.85
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	98.82
KOG1389	435	consensus 3-oxoacyl CoA thiolase [Lipid transport	98.8
PRK08257	498	acetyl-CoA acetyltransferase; Validated	98.78
PRK07855	386	lipid-transfer protein; Provisional	98.74
PF02803	123	Thiolase_C: Thiolase, C-terminal domain; InterPro:	98.69
KOG1391	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	98.58
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.12
KOG1406	408	consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44	97.95
KOG1392	465	consensus Acetyl-CoA acetyltransferase [Lipid tran	97.75
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	97.23
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	97.16
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	97.13
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	97.02
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	96.96
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	96.92
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	96.76
PRK06840	339	hypothetical protein; Validated	95.7
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	95.53
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	95.49
PRK04262	347	hypothetical protein; Provisional	95.41
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	95.12
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	95.06
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	94.15
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	93.9
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	92.96
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	92.39
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	92.37
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	90.37
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	88.94
PLN03173	391	chalcone synthase; Provisional	87.88
PLN03170	401	chalcone synthase; Provisional	87.85
PLN03169	391	chalcone synthase family protein; Provisional	86.96
PRK08256	391	lipid-transfer protein; Provisional	86.37
PRK06158	384	thiolase; Provisional	86.35
PRK05790	393	putative acyltransferase; Provisional	86.14
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	85.3
PLN03172	393	chalcone synthase family protein; Provisional	85.26
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	84.94
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	84.11
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	84.05
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	83.89
PRK06059	399	lipid-transfer protein; Provisional	83.69
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	83.51
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	82.48
PLN03171	399	chalcone synthase-like protein; Provisional	82.37

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=9.6e-43  Score=339.39  Aligned_cols=202  Identities=28%  Similarity=0.377  Sum_probs=180.9

Q ss_pred             CceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC
Q 045789            2 GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD   81 (206)
Q Consensus         2 gEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D   81 (206)
                      |||++++|||++++|.++|++||++|+|.++|+||.+.+.+.|++.+|.+++++||+++||+|++|+|||+|||||++||
T Consensus       238 geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGD  317 (1061)
T COG3321         238 GEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGD  317 (1061)
T ss_pred             eeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcC
Confidence            79999999999999999999999999999999999877999999999999999999999999999999999999999999


Q ss_pred             Hhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccc
Q 045789           82 LREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISI  148 (206)
Q Consensus        82 ~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~  148 (206)
                      ++|..+             |.+||+|+||||++.|+|+++++|++|+|+++++||++|+++|||.+++..++|+++++.+
T Consensus       318 piE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~~  397 (1061)
T COG3321         318 PIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEAT  397 (1061)
T ss_pred             HHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCCc
Confidence            999998             7789999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCC-CCeEEEEEee-cccceeEEEccccCC--CCCCCCCCCCCCCccChHHHHHHHh
Q 045789          149 PVIKQ-FKTRFVLISF-NGSFLSSLYMASCFR--ARPCFRAPSVAVFEETHEAHIAIKL  203 (206)
Q Consensus       149 ~~~~~-~~~~~~~~~~-~gG~n~~~vl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  203 (206)
                      +|+.. .+++..+++| +||+|+|+|++++++  .......|...+.+.+..+.+....
T Consensus       398 ~W~~~~~prrAgvssfG~gGtNaHvIlEe~~~~~~~~~~~~p~~l~lSAk~~~~L~~~a  456 (1061)
T COG3321         398 PWPTGGGPRRAGVSSFGFGGTNAHVILEEAPPRAESTIPSSPRLLVLSAKTAERLAATA  456 (1061)
T ss_pred             CCCCCCCCceeeeeccCCCCCceEEEEeecCCcccCCCCCCCceeeeecCCHHHHHHHH
Confidence            99887 6777778776 999999999999886  1112222223344555555555443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=100.00  E-value=1.6e-40  Score=341.68  Aligned_cols=179  Identities=25%  Similarity=0.373  Sum_probs=166.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||||+++|++||++|||+|+|+++++||+....+.|++.++.++|++||++|||+|+||+|||+|||||+.|
T Consensus       269 ~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~g  348 (2582)
T TIGR02813       269 IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAG  348 (2582)
T ss_pred             ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCC
Confidence            59999999999999999999999999999999999997778899999999999999999999999999999999999999


Q ss_pred             CHhhhhc--------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccc
Q 045789           81 DLREYQA--------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFI  146 (206)
Q Consensus        81 D~~E~~a--------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~  146 (206)
                      |++|..|              ++|+|+|++|||+++|||+++++|++++|++++|||++|+++|||.++++..+|+++++
T Consensus       349 D~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~  428 (2582)
T TIGR02813       349 DVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTE  428 (2582)
T ss_pred             CHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCC
Confidence            9999888              67999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccC---CCCeEEEEEee-cccceeEEEccccCCC
Q 045789          147 SIPVIK---QFKTRFVLISF-NGSFLSSLYMASCFRA  179 (206)
Q Consensus       147 ~~~~~~---~~~~~~~~~~~-~gG~n~~~vl~~~~~~  179 (206)
                      .++|+.   ...+++.+|+| |||+|+|+||+++++.
T Consensus       429 ~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~~~  465 (2582)
T TIGR02813       429 TRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYSPK  465 (2582)
T ss_pred             cccCcccCCCCccEEEEeCccCCCeeEEEEEeecCcc
Confidence            999963   23455566664 9999999999998643

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=100.00  E-value=7.3e-38  Score=287.00  Aligned_cols=171  Identities=64%  Similarity=0.972  Sum_probs=153.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|+|+++++|+++.+.++|++.++.++|++||+++||+|+||+||++|||||+.+
T Consensus       359 ~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g  438 (540)
T PLN02787        359 MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAG  438 (540)
T ss_pred             cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCC
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 045789           81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPV  150 (206)
Q Consensus        81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (206)
                      |..|..|          ++|+++|+++||+++|+|++++++++++|++|+|||++|+++|++.++++....   .+..+|
T Consensus       439 D~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~---~~~~~~  515 (540)
T PLN02787        439 DLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVG---PKKERL  515 (540)
T ss_pred             CHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccc---cccccC
Confidence            9999987          689999999999999999999999999999999999999999999887654221   111222


Q ss_pred             cCCCCeEEEEEeecccceeEEEcccc
Q 045789          151 IKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       151 ~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                        +.+..+.++++|||+|+++|++..
T Consensus       516 --~ir~aL~nSfGFGG~Naslvl~~~  539 (540)
T PLN02787        516 --DIKVALSNSFGFGGHNSSILFAPY  539 (540)
T ss_pred             --CcCEEEEeeecCCceeEEEEEEeC
Confidence              345666666779999999999864

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=2.2e-37  Score=277.20  Aligned_cols=169  Identities=34%  Similarity=0.523  Sum_probs=155.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|+|+++++|+.+.+.++|++..+.++|++||+++|++|+||+|||+|||||+.+
T Consensus       240 ~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~  319 (418)
T PRK07910        240 FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVG  319 (418)
T ss_pred             eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCC
Confidence            58999999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789           81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (206)
                      |..|..|         .++++.|+++||+++|||++++++++++|++++|||+.|+++++|.++++.++.      .+|+
T Consensus       320 D~~E~~Al~~~fg~~~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~------~~~~  393 (418)
T PRK07910        320 DVAEGKAINNALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAG------EPRP  393 (418)
T ss_pred             CHHHHHHHHHHhCCCCCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCC------CCcC
Confidence            9999988         568999999999999999999999999999999999999999999998776542      4555


Q ss_pred             CCCCeEEEEEeecccceeEEEccc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      ...++.+.++++|||+|+|+|++.
T Consensus       394 ~~~~~al~nsfGfGG~N~slvl~~  417 (418)
T PRK07910        394 GNYRYAINNSFGFGGHNVALAFGR  417 (418)
T ss_pred             CCccEEEEeeecCCCeeEEEEEec
Confidence            555666666677999999999985

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=100.00  E-value=2.7e-37  Score=269.90  Aligned_cols=170  Identities=38%  Similarity=0.513  Sum_probs=152.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|+++|++|+|++.++|+.+.+.+.|++.++.++|+++|+++||+++||+|||+|||||+.+
T Consensus       160 ~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~  239 (342)
T PRK14691        160 MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVG  239 (342)
T ss_pred             ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCC
Confidence            58999999999999999999999999999999999988877889999999999999999999999999999999999999


Q ss_pred             CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCccccccccc
Q 045789           81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~~  149 (206)
                      |..|..|          ++|+|.|+++||+++|||++++++++++|++++|||++|+++|+|.++ ++.++.    +  +
T Consensus       240 D~~E~~Ai~~~fg~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~----~--~  313 (342)
T PRK14691        240 DLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAG----N--A  313 (342)
T ss_pred             CHHHHHHHHHHhCCCCCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCcccC----C--C
Confidence            9999877          689999999999999999999999999999999999999999999873 444332    2  2


Q ss_pred             ccCCCCeEEEEEeecccceeEEEcccc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      ++.+.++.+.++++|||+|+|+|++..
T Consensus       314 ~~~~~~~al~nsfgfGG~n~~lvl~~~  340 (342)
T PRK14691        314 QPHDMTYALSNGFGFAGVNASILLKRW  340 (342)
T ss_pred             ccCCCCEEEEeCccCCCeeEEEEEeec
Confidence            233455666666679999999999874

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=8e-37  Score=273.28  Aligned_cols=170  Identities=36%  Similarity=0.581  Sum_probs=152.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|+++|++|+|++.++|+.+.+.+++++....++|+++|+++||+|+||+|||+|||||+.+
T Consensus       232 ~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~  311 (414)
T PRK08722        232 LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG  311 (414)
T ss_pred             eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCC
Confidence            58999999999999999999999999999999999988888888888899999999999999999999999999999999


Q ss_pred             CHhhhhc------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccc
Q 045789           81 DLREYQA------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISI  148 (206)
Q Consensus        81 D~~E~~a------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~  148 (206)
                      |..|..|            ++|+++|+++||+++|||++++++++++|++++|||++|+++|+|.++++.++.    +..
T Consensus       312 D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~----~~~  387 (414)
T PRK08722        312 DVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPH----TAR  387 (414)
T ss_pred             CHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCC----ccc
Confidence            9999876            689999999999999999999999999999999999999999999988766542    222


Q ss_pred             cccCCCCeEEEEEeecccceeEEEccc
Q 045789          149 PVIKQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       149 ~~~~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      +|. ..++.+.++++|||+|+|+||+.
T Consensus       388 ~~~-~~~~~l~nsfGfGG~n~~lvl~~  413 (414)
T PRK08722        388 KVE-SMEYAICNSFGFGGTNGSLIFKK  413 (414)
T ss_pred             cCC-CCCEEEEecccCCCceEEEEEec
Confidence            221 23455555566999999999974

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=100.00  E-value=9.4e-37  Score=274.53  Aligned_cols=172  Identities=45%  Similarity=0.601  Sum_probs=154.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|++.++|+.+.+.+.+++....++|++||++|||+++||+|||+|||||+.+
T Consensus       253 ~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~  332 (437)
T PLN02836        253 IGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLG  332 (437)
T ss_pred             eecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCc
Confidence            58999999999999999999999999999999999988888888888999999999999999999999999999999999


Q ss_pred             CHhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccc
Q 045789           81 DLREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFIS  147 (206)
Q Consensus        81 D~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~  147 (206)
                      |..|..+             +++++.|+++||+.+|+|++++++++++|++++|||++|+++|+|.++++.++..     
T Consensus       333 D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~~-----  407 (437)
T PLN02836        333 DAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLT-----  407 (437)
T ss_pred             CHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCccc-----
Confidence            9999887             6789999999999999999999999999999999999999999999987666542     


Q ss_pred             ccccCCCCeEEEEEeecccceeEEEccccC
Q 045789          148 IPVIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       148 ~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      .+.....+..+.++++|||+|+|+|++++|
T Consensus       408 ~~~~~~~~~~l~nsfgfGG~na~lvl~~~~  437 (437)
T PLN02836        408 ASKAMLIRAALSNSFGFGGTNASLLFTSPP  437 (437)
T ss_pred             CCCCCCccEEEEecccCCCeeEEEEEecCC
Confidence            112234455566666799999999999875

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=100.00  E-value=2.9e-36  Score=270.16  Aligned_cols=170  Identities=44%  Similarity=0.633  Sum_probs=153.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHH-cCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAK-SGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~-Agi~~~dI~~ve~hgtgt~~   79 (206)
                      +|||++++|||++++|+++|++||++|+|+++++|+.+.+.+.+++.++.++|++||++ |||+++||||||+|||||++
T Consensus       237 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~  316 (421)
T PTZ00050        237 MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTPI  316 (421)
T ss_pred             eccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCCC
Confidence            48999999999999999999999999999999999998888889999999999999999 99999999999999999999


Q ss_pred             CCHhhhhc------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccc
Q 045789           80 GDLREYQA------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFIS  147 (206)
Q Consensus        80 ~D~~E~~a------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~  147 (206)
                      +|.+|..+            ++|++.|+++||+++|||++++++++++|++++|||++|+++|++.++++.++.     .
T Consensus       317 ~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~-----~  391 (421)
T PTZ00050        317 GDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQG-----K  391 (421)
T ss_pred             CCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCC-----c
Confidence            99999876            679999999999999999999999999999999999999999999887655543     2


Q ss_pred             ccccC-CCCeEEEEEeecccceeEEEccc
Q 045789          148 IPVIK-QFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       148 ~~~~~-~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      .+|+. ..++.+.++++|||+|+|+|++.
T Consensus       392 ~~~~~~~~~~~l~nsfgfgG~n~~lvl~~  420 (421)
T PTZ00050        392 TAHPLQSIDAVLSTSFGFGGVNTALLFTK  420 (421)
T ss_pred             ccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence            33432 34556666667999999999985

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=2.6e-36  Score=270.36  Aligned_cols=170  Identities=41%  Similarity=0.532  Sum_probs=153.8

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|+|++.++|+.+.+.+.+++..+.++|++||++|||+|+||+|||+|||||+.+
T Consensus       242 ~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~  321 (424)
T PRK06333        242 MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPVG  321 (424)
T ss_pred             EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccc
Confidence            48999999999999999999999999999999999988888888899999999999999999999999999999999999


Q ss_pred             CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCccccccccc
Q 045789           81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~~  149 (206)
                      |..|..+          +++++.|+++||+.+|||++++++++++|++++|||++|+++|++.++ ++.    ++.+.++
T Consensus       322 D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~----~~~~~~~  397 (424)
T PRK06333        322 DLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDV----VANKARP  397 (424)
T ss_pred             hHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccccc----ccCCCcc
Confidence            9999977          789999999999999999999999999999999999999999999876 443    3334466


Q ss_pred             ccCCCCeEEEEEeecccceeEEEcccc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      |+  .++.+.++.+|||+|+|+||+.+
T Consensus       398 ~~--~~~al~~s~gfGG~n~~~il~~~  422 (424)
T PRK06333        398 MD--MDYALSNGFGFGGVNASILFRRW  422 (424)
T ss_pred             cC--cCEEEEeeecCCCeeEEEEEecc
Confidence            64  34566666679999999999875

>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.5e-37  Score=260.96  Aligned_cols=171  Identities=51%  Similarity=0.710  Sum_probs=154.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|++||++||+++.|+++++|.++++.|+|++.+...+|+++|++||+.|+||+||++|+|.|+.|
T Consensus       255 mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~G  334 (440)
T KOG1394|consen  255 MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPLG  334 (440)
T ss_pred             eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcCc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |..|..|           .+|.|.|+.+||..+|+|.++-+-.+++++++++||++|++.|++.++++..++    ...+
T Consensus       335 D~aE~~Ai~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~~~~----~~~~  410 (440)
T KOG1394|consen  335 DAAEAEAIKRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLDYVPL----KASE  410 (440)
T ss_pred             hHHHHHHHHHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccccccccc----cccc
Confidence            9999999           469999999999999999999999999999999999999999999777666554    4455


Q ss_pred             ccCC-CCeEEEEEee-cccceeEEEccc
Q 045789          150 VIKQ-FKTRFVLISF-NGSFLSSLYMAS  175 (206)
Q Consensus       150 ~~~~-~~~~~~~~~~-~gG~n~~~vl~~  175 (206)
                      |..+ ..+....|+| |||+|+++++..
T Consensus       411 ~~~~~~~~valsNSFGFGGtNaSl~fa~  438 (440)
T KOG1394|consen  411 KKGGNKVRVALSNSFGFGGTNASLCFAK  438 (440)
T ss_pred             ccccccceEEEecccccCCcchhheeee
Confidence            6553 3344455555 999999998764

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=100.00  E-value=8.3e-36  Score=265.61  Aligned_cols=164  Identities=26%  Similarity=0.365  Sum_probs=147.8

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|++||++||++|.|+++++|+.+..   +++.++.++|+++|+++|++++||+||++|||||+.+
T Consensus       227 ~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~  303 (399)
T cd00832         227 PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPEL  303 (399)
T ss_pred             eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCC
Confidence            5899999999999999999999999999999999998643   3588999999999999999999999999999999999


Q ss_pred             CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789           81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (206)
                      |..|..+         ++|++.|+++||+.+|+|++++++++++|++++|||++|+++++|.++++.++.      .+++
T Consensus       304 D~~E~~al~~~fg~~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~------~~~~  377 (399)
T cd00832         304 DRAEAAALAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTG------RPRP  377 (399)
T ss_pred             CHHHHHHHHHHhCCCCCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCC------cccC
Confidence            9999988         689999999999999999999999999999999999999999999887766543      2334


Q ss_pred             CCCCeEEEEEeecccceeEEEc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYM  173 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl  173 (206)
                      ...++.+.++++|||+|+|+||
T Consensus       378 ~~~~~al~nsfgfGG~na~lvl  399 (399)
T cd00832         378 AALRTALVLARGRGGFNSALVV  399 (399)
T ss_pred             CCCCEEEEeccCCCCcceEEEC
Confidence            4456666666779999999986

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1e-35  Score=265.47  Aligned_cols=166  Identities=40%  Similarity=0.549  Sum_probs=148.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|+|+++++|+.+.  ..|++..+.++|+++|++++++|+||+||++|||||+.+
T Consensus       231 ~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~--~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~  308 (405)
T PRK09116        231 IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHV--TQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRG  308 (405)
T ss_pred             eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcC--CCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCC
Confidence            589999999999999999999999999999999998764  455778899999999999999999999999999999999


Q ss_pred             CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCC-CCCCCCccccccccccc
Q 045789           81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHV-LSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  151 (206)
                      |..|..|        +++++.|+++||+.+|+|++++++++++|++++|||++|+++++|++ +++.++.    +..  +
T Consensus       309 D~~E~~Ai~~~fg~~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~----~~~--~  382 (405)
T PRK09116        309 DIAESQATAAVFGARMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMG----EAR--E  382 (405)
T ss_pred             CHHHHHHHHHHhCCCCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCC----CCc--c
Confidence            9999999        78999999999999999999999999999999999999999999988 4665543    223  3


Q ss_pred             CCCCeEEEEEeecccceeEEEcc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYMA  174 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl~  174 (206)
                      .+.++.+.++++|||+|+++|++
T Consensus       383 ~~~~~~l~nsfGfGG~n~~lvl~  405 (405)
T PRK09116        383 IDTEYVMSNNFAFGGINTSLIFK  405 (405)
T ss_pred             CCCCEEEEeeecCCcccEEEEEC
Confidence            34566777777799999999985

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.3e-35  Score=264.65  Aligned_cols=170  Identities=45%  Similarity=0.641  Sum_probs=153.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||++++.|+++|+++|++|+|++.++|+.+.+.+.+.+..+.++++++|+++|++++||+|||+|||||+.+
T Consensus       230 ~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~  309 (411)
T PRK07314        230 MGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAG  309 (411)
T ss_pred             EEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccc
Confidence            58999999999999999999999999999999999988777888888899999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |..|..+           +++++.|+++||+.+|||++++++++++|++++|||++|+++|++.++++.++.      .+
T Consensus       310 d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~------~~  383 (411)
T PRK07314        310 DKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPN------EA  383 (411)
T ss_pred             cHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCC------cc
Confidence            9999987           789999999999999999999999999999999999999999999887765543      23


Q ss_pred             ccCCCCeEEEEEeecccceeEEEcccc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      +....++.++++.+|||+|+|+||+.+
T Consensus       384 ~~~~~~~al~~s~gfGG~n~~~vl~~~  410 (411)
T PRK07314        384 RERKIDYALSNSFGFGGTNASLVFKRY  410 (411)
T ss_pred             cCCCCCEEEEecccCCCceEEEEEecC
Confidence            333445566666679999999999864

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=9.1e-36  Score=264.73  Aligned_cols=170  Identities=45%  Similarity=0.627  Sum_probs=151.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|++||++||++|.|++.++|+++.+.|.|++.+..++|+.||++||++++||+||++|||+|+.+
T Consensus       230 ~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~n  309 (412)
T COG0304         230 IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPAN  309 (412)
T ss_pred             EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCC-CCCCCCCcccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKH-VLSRTSGASAAFISI  148 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~-~~~~~~~~~~~~~~~  148 (206)
                      |..|..+           ++|.|.|+.+||+.+|+|.++++-++++|+++++||+.|+++++|+ ++++.++.      .
T Consensus       310 D~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~~v~~------~  383 (412)
T COG0304         310 DKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLDVVPN------E  383 (412)
T ss_pred             cHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccccccccCC------c
Confidence            9999999           5689999999999999999999999999999999999999999986 44555553      1


Q ss_pred             cccCCCCeEEEEEeecccceeEEEcccc
Q 045789          149 PVIKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       149 ~~~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      .........+.++.+|||+|+.+|++.+
T Consensus       384 ~~~~~~~~~lsnsfGFGG~Na~lv~~~~  411 (412)
T COG0304         384 ARTGAVRAALSNSFGFGGTNASLVFKRY  411 (412)
T ss_pred             ccccceeEEEecccccCCcceEEEEecC
Confidence            2222234444444569999999999864

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=100.00  E-value=3.8e-35  Score=261.77  Aligned_cols=165  Identities=36%  Similarity=0.537  Sum_probs=143.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|++||++||++|+|+++++|+.+.  +.|++.++.++|++||+.+  ++ |||||++|||||+.+
T Consensus       230 ~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~--~~p~~~~~~~a~~~Al~~~--~~-~Idyi~aHgtGT~~~  304 (406)
T PRK07967        230 IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDM--VAPSGEGAVRCMQMALATV--DT-PIDYINTHGTSTPVG  304 (406)
T ss_pred             eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCC--CCCCHHHHHHHHHHHHhCC--CC-CccEEEcCCCCCCCC
Confidence            599999999999999999999999999999999999875  4568999999999999854  45 999999999999999


Q ss_pred             CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCC-CCCCCCcccccccccc
Q 045789           81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHV-LSRTSGASAAFISIPV  150 (206)
Q Consensus        81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~  150 (206)
                      |..|..|         ++|+++|+++||+++|||++++++++++|++++|||++|+++++|.+ +++..+     ...++
T Consensus       305 D~~E~~Ai~~~fg~~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~-----~~~~~  379 (406)
T PRK07967        305 DVKELGAIREVFGDKSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVT-----ETTDN  379 (406)
T ss_pred             CHHHHHHHHHHhCCCCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccC-----CCCcC
Confidence            9999999         58999999999999999999999999999999999999999999877 343332     21222


Q ss_pred             cCCCCeEEEEEeecccceeEEEcccc
Q 045789          151 IKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       151 ~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                       ...++.+.++++|||+|+|+|++++
T Consensus       380 -~~~~~~l~~sfgfGG~n~~lvl~~~  404 (406)
T PRK07967        380 -AELTTVMSNSFGFGGTNATLVFRRY  404 (406)
T ss_pred             -CCCCEEEEecccCCCeeEEEEEEec
Confidence             2344555666679999999999875

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=4.9e-35  Score=259.13  Aligned_cols=166  Identities=36%  Similarity=0.596  Sum_probs=149.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|+|++.++|+.+.+.+++++..+.++|+++|+++||+|+||+|||+|||||+.+
T Consensus       208 ~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~  287 (381)
T PRK05952        208 LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLN  287 (381)
T ss_pred             ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCC
Confidence            59999999999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccC
Q 045789           81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIK  152 (206)
Q Consensus        81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (206)
                      |..|..+        ++|++.|+++||+++|+|++++++++++|++++|||+.|+++|++++  +.+.       .+.+.
T Consensus       288 D~~E~~al~~~fg~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~--~~v~-------~~~~~  358 (381)
T PRK05952        288 DQREANLIQALFPHRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDL--NFVR-------QAQQS  358 (381)
T ss_pred             cHHHHHHHHHHcCCCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC--CcCC-------CcccC
Confidence            9999987        78999999999999999999999999999999999999999876543  3332       22334


Q ss_pred             CCCeEEEEEeecccceeEEEccc
Q 045789          153 QFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       153 ~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      ..++.+.++++|||+|+++|++.
T Consensus       359 ~~~~~l~~s~gfGG~na~lvl~~  381 (381)
T PRK05952        359 PLQNVLCLSFGFGGQNAAIALGK  381 (381)
T ss_pred             CCCEEEEeeecCCCeeEEEEEeC
Confidence            45566666677999999999863

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=7.2e-35  Score=260.06  Aligned_cols=165  Identities=39%  Similarity=0.507  Sum_probs=146.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|.|++.++|+.+.+.++  +.++.++|+++|+++|+  +||+|||+|||||+.+
T Consensus       230 ~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~--~~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~  305 (406)
T PRK08439        230 MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPA--PEGPLRAMKAALEMAGN--PKIDYINAHGTSTPYN  305 (406)
T ss_pred             eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCC--HHHHHHHHHHHHHHcCC--CccCEEEccCCcCCCC
Confidence            5899999999999999999999999999999999987765544  47889999999999999  7999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |..|..+           +++++.|+++||+.+|||++++++++++|++++|||++|+.+++|+++++.++.    +.. 
T Consensus       306 D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~----~~~-  380 (406)
T PRK08439        306 DKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPN----VAR-  380 (406)
T ss_pred             CHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCC----ccc-
Confidence            9999998           479999999999999999999999999999999999999999999988776653    222 


Q ss_pred             ccCCCCeEEEEEeecccceeEEEccc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                       +.+.+..+.++++|||+|+|+||+.
T Consensus       381 -~~~~~~~l~nsfgfGG~n~~lvl~~  405 (406)
T PRK08439        381 -KAELNVVMSNSFGFGGTNGVVIFKK  405 (406)
T ss_pred             -cCCCCEEEEeeecCCCceEEEEEec
Confidence             2344566666667999999999975

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=100.00  E-value=8.3e-35  Score=258.61  Aligned_cols=168  Identities=49%  Similarity=0.679  Sum_probs=150.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|++.++|+.+.+.+.+.+..+.++++++|+++|++++||||||+|||||+.+
T Consensus       229 ~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~  308 (407)
T TIGR03150       229 MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLG  308 (407)
T ss_pred             EeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCC
Confidence            48999999999999999999999999999999999987777777888899999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |..|..+           ++|++.|+++||+.+|||++++++++++|++++|||++|+++|++.++++.++.    +..+
T Consensus       309 D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~----~~~~  384 (407)
T TIGR03150       309 DKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPN----EARE  384 (407)
T ss_pred             CHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCC----CCcc
Confidence            9999988           679999999999999999999999999999999999999999999887765432    2333


Q ss_pred             ccCCCCeEEEEEeecccceeEEEcc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMA  174 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~  174 (206)
                      |  +.++.+.++.+|||+|+|+||+
T Consensus       385 ~--~~~~~l~~s~gfgG~n~~~vl~  407 (407)
T TIGR03150       385 R--KIDYALSNSFGFGGHNASLVFK  407 (407)
T ss_pred             C--CcCEEEEecccCCCceEEEEeC
Confidence            3  2345566666799999999984

FabB sequences should fall well below the noise cutoff of this model.

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=100.00  E-value=9.6e-35  Score=258.51  Aligned_cols=168  Identities=32%  Similarity=0.455  Sum_probs=150.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|.|++.++|+.+.+.+. ++.++.++|+++|+++|++++||+|||+|||||+.+
T Consensus       229 ~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~  307 (407)
T cd00828         229 EAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDVISAHGTSTPAN  307 (407)
T ss_pred             eecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEEecccccCccc
Confidence            5899999999999999999999999999999999998766665 789999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |..|..+           +++++.|+++||+.+|||++++++++++|+++++||+.|+++++|++++..    ++.+..+
T Consensus       308 D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~----~~~~~~~  383 (407)
T cd00828         308 DVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLS----VVGLSRD  383 (407)
T ss_pred             cHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccccc----ccCcCcc
Confidence            9999988           589999999999999999999999999999999999999999999885433    4445667


Q ss_pred             ccCCCCeEEEEEeecccceeEEEc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYM  173 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl  173 (206)
                      |+...++.+.++++|||+|+|+|+
T Consensus       384 ~~~~~~~al~~s~gfgG~n~~lv~  407 (407)
T cd00828         384 LNLKVRAALVNAFGFGGSNAALVL  407 (407)
T ss_pred             CCCCccEEEEecccCCCcceEEEC
Confidence            754334566666679999999986

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.7e-34  Score=259.11  Aligned_cols=171  Identities=35%  Similarity=0.476  Sum_probs=153.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||+.++|+++|++||++|.|++.++|+.+.+.+.+++..+.++|+++|+++|++|+||+||++|||||+.+
T Consensus       243 ~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~  322 (425)
T PRK06501        243 MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTPEN  322 (425)
T ss_pred             eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCccCcch
Confidence            58999999999999999999999999999999999988777888899999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |..|..+           ++|++.|+++||+.+|||++++++++++|++++|||++|+++|+|.++++.++..      .
T Consensus       323 d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~------~  396 (425)
T PRK06501        323 DKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNV------A  396 (425)
T ss_pred             HHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCc------c
Confidence            9999877           6899999999999999999999999999999999999999999999887665431      1


Q ss_pred             ccCCCCeEEEEEeecccceeEEEccccC
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      .+.+.+..+.++++|||+|+|+|++.+|
T Consensus       397 ~~~~~~~~l~ns~gfgG~n~~~vl~~~~  424 (425)
T PRK06501        397 RDARVTAVLSNSFGFGGQNASLVLTAEP  424 (425)
T ss_pred             cCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence            1223344555556699999999999876

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=100.00  E-value=3.3e-34  Score=254.36  Aligned_cols=167  Identities=47%  Similarity=0.657  Sum_probs=151.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||++.++|+++|+++|++|+|++.++|+.+.+.+.+++.++.++++++|+++|++++||+|||+||+||+.+
T Consensus       229 ~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~  308 (406)
T cd00834         229 LGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLN  308 (406)
T ss_pred             eeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccc
Confidence            58999999999999999999999999999999999988777777899999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |..|..+           +++++.|+++||+.+|||++++++++++|+++++||++|+++|++..+++.++    .+..+
T Consensus       309 d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~----~~~~~  384 (406)
T cd00834         309 DAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVP----NEARE  384 (406)
T ss_pred             cHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC----CCCcc
Confidence            9999987           68999999999999999999999999999999999999999999876665444    35577


Q ss_pred             ccCCCCeEEEEEeecccceeEEEc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYM  173 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl  173 (206)
                      |+.  ++.++++.+|||+|+|+||
T Consensus       385 ~~~--~~~l~~s~g~gG~n~~~vl  406 (406)
T cd00834         385 API--RYALSNSFGFGGHNASLVF  406 (406)
T ss_pred             ccc--cEEEEeeecCCceeeEEEC
Confidence            754  5566666679999999986

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=100.00  E-value=8.4e-34  Score=253.52  Aligned_cols=176  Identities=31%  Similarity=0.400  Sum_probs=160.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|++.++|+.+.....|+...+.++|+++|+++|++++|||||++|||||+.+
T Consensus       233 ~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~  312 (424)
T smart00825      233 RGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLG  312 (424)
T ss_pred             ccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCC
Confidence            58999999999999999999999999999999999887767778899999999999999999999999999999999999


Q ss_pred             CHhhhhc--------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccc
Q 045789           81 DLREYQA--------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFI  146 (206)
Q Consensus        81 D~~E~~a--------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~  146 (206)
                      |..|..+              ++|++.|+++||+.+|+|++++++++++|++++|||++|+++|++.++++..+++++.+
T Consensus       313 d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~  392 (424)
T smart00825      313 DPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPTE  392 (424)
T ss_pred             CHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccCC
Confidence            9999766              57899999999999999999999999999999999999999999999998889999999


Q ss_pred             cccccCC--CCeEEEEEeecccceeEEEcccc
Q 045789          147 SIPVIKQ--FKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       147 ~~~~~~~--~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      ..+|++.  .+..+.++.+|||+|+|+||+++
T Consensus       393 ~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~  424 (424)
T smart00825      393 ATPWPATGRPRRAGVSSFGFGGTNAHVILEEA  424 (424)
T ss_pred             CcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence            9999632  34455555569999999999864

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=100.00  E-value=2e-33  Score=251.13  Aligned_cols=165  Identities=33%  Similarity=0.540  Sum_probs=145.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|.++|+++|++|+|+++++|+.+.  +.|+..++.++|+++|+++|++|+||+|||+|||||+.+
T Consensus       237 ~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~--~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~~  314 (410)
T PRK07103        237 YGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRG--PDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLG  314 (410)
T ss_pred             EeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCC--CCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCCCC
Confidence            589999999999999999999999999999999998874  467788889999999999999999999999999999999


Q ss_pred             CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCC-CCCCCCCCCCccccccccccc
Q 045789           81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENP-DKHVLSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  151 (206)
                      |..|..+        ++|++.|+++||+.+|||++++++++++|++++|||++|+++| ++.++  .++.      .+++
T Consensus       315 D~~E~~al~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~--~v~~------~~~~  386 (410)
T PRK07103        315 DETELAALFASGLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFR--WVGS------TAES  386 (410)
T ss_pred             CHHHHHHHhcCCCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcC--ccCC------CCcC
Confidence            9999988        7899999999999999999999999999999999999999987 55432  2221      2333


Q ss_pred             CCCCeEEEEEeecccceeEEEccc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      ...++.+.++++|||+|+|+|+++
T Consensus       387 ~~~~~~l~~s~gfGG~n~~~vl~~  410 (410)
T PRK07103        387 ARIRYALSLSFGFGGINTALVLER  410 (410)
T ss_pred             CCCCEEEEecccCCCceEEEEEeC
Confidence            444566666677999999999873

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=100.00  E-value=4e-33  Score=248.32  Aligned_cols=173  Identities=31%  Similarity=0.414  Sum_probs=157.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|.++|+++|++|+|++.++|+.+.....|+...+.++++++|+++|++++||||||+|||||+.+
T Consensus       233 ~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~  312 (421)
T cd00833         233 RGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLG  312 (421)
T ss_pred             eeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCC
Confidence            48999999999999999999999999999999999887666677899999999999999999999999999999999999


Q ss_pred             CHhhhhc--------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccc
Q 045789           81 DLREYQA--------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFI  146 (206)
Q Consensus        81 D~~E~~a--------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~  146 (206)
                      |..|..+              +++++.|+++||+.+|+|++++++++++|+++.+||++|++++++.++++...+.++++
T Consensus       313 D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~  392 (421)
T cd00833         313 DPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTE  392 (421)
T ss_pred             CHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCCeEeeCC
Confidence            9999877              37899999999999999999999999999999999999999999999988888888999


Q ss_pred             cccccCC--CCeEEEEEeecccceeEEEc
Q 045789          147 SIPVIKQ--FKTRFVLISFNGSFLSSLYM  173 (206)
Q Consensus       147 ~~~~~~~--~~~~~~~~~~~gG~n~~~vl  173 (206)
                      ..+|+..  .++.+.++.+|||+|+|+|+
T Consensus       393 ~~~~~~~~~~~~~~~~sfgfgg~n~~~vl  421 (421)
T cd00833         393 ARPWPAPAGPRRAGVSSFGFGGTNAHVIL  421 (421)
T ss_pred             CccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence            8998754  33444444459999999986

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.98  E-value=1.8e-32  Score=258.84  Aligned_cols=172  Identities=24%  Similarity=0.370  Sum_probs=160.0

Q ss_pred             CceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCC-CCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            2 GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYH-ITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         2 gEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +||+++++|.|.+.|+    ++||.|.-..+|.||+. -+.+.|+++-|.+.+++.|+++|++|+++-|||+|||||++|
T Consensus       234 seg~~avllqrk~~Ar----RvYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVG  309 (2376)
T KOG1202|consen  234 SEGVVAVLLQRKSLAR----RVYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVG  309 (2376)
T ss_pred             cCceEEEEEehhHHHH----HHHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCC
Confidence            6999999999999998    79999999999999985 777889999999999999999999999999999999999999


Q ss_pred             CHhhhhc------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCccccccc
Q 045789           81 DLREYQA------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFIS  147 (206)
Q Consensus        81 D~~E~~a------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~  147 (206)
                      |+.|+.+            +.|||+|+|+||++-|||+.+|.|.+++|++|.|||++||.+|||++. +-+.++.+.+++
T Consensus       310 DpQEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~  389 (2376)
T KOG1202|consen  310 DPQEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRP  389 (2376)
T ss_pred             ChHHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCC
Confidence            9999998            679999999999999999999999999999999999999999999995 888899999999


Q ss_pred             ccccCCCCeEEEEEee-cccceeEEEccccCCCC
Q 045789          148 IPVIKQFKTRFVLISF-NGSFLSSLYMASCFRAR  180 (206)
Q Consensus       148 ~~~~~~~~~~~~~~~~-~gG~n~~~vl~~~~~~~  180 (206)
                      .||+.+   .+.+|+| |||.|+|+||+..+...
T Consensus       390 lp~~GG---ivGiNSFGFGGsN~HviLks~~~~~  420 (2376)
T KOG1202|consen  390 LPWRGG---IVGINSFGFGGSNAHVILKSNTKPK  420 (2376)
T ss_pred             CCccCc---eeeeeccccCCCceeEEeccCCCCC
Confidence            999766   6677776 99999999999876444

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.98  E-value=1.1e-31  Score=238.56  Aligned_cols=163  Identities=33%  Similarity=0.431  Sum_probs=142.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++     ++.+  .+|.|++.++|+.+...++|++.++.++|+++|+++|++++|||||++|||||+.+
T Consensus       221 ~gEGaa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~  293 (392)
T PRK09185        221 IGEAAAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLN  293 (392)
T ss_pred             eeceEEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCC
Confidence            5899999999997     3333  57999999999998877888899999999999999999999999999999999999


Q ss_pred             CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccC
Q 045789           81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIK  152 (206)
Q Consensus        81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (206)
                      |..|..+        +++++.|+++||+++|||++++++++++|+++++||+.|+++++|.++++...    .+..+|  
T Consensus       294 D~~E~~al~~~f~~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~----~~~~~~--  367 (392)
T PRK09185        294 DAMESRAVAAVFGDGVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLV----ENAQAL--  367 (392)
T ss_pred             CHHHHHHHHHHhCCCCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccC----CCCccC--
Confidence            9999988        68999999999999999999999999999999999999999999988754333    333333  


Q ss_pred             CCCeEEEEEeecccceeEEEcccc
Q 045789          153 QFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       153 ~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      ..++.+.++++|||+|+|+||+.+
T Consensus       368 ~~~~~l~~s~gfgG~n~~lvl~~~  391 (392)
T PRK09185        368 AIRYVLSNSFAFGGNNCSLIFGRA  391 (392)
T ss_pred             CCCEEEEeCccCCceeEEEEEEeC
Confidence            345566666679999999999864

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.96  E-value=3.6e-28  Score=216.34  Aligned_cols=150  Identities=18%  Similarity=0.188  Sum_probs=126.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|++||++|||+|.|++...+  .    . +..++.++|++||++||+ ++|||||++|||||+.+
T Consensus       241 ~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~--~----~-~~~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~  312 (398)
T PRK06519        241 LGSGGAFLVLESREHAEARGARPYARISGVESDRA--R----R-APGDLEASLERLLKPAGG-LAAPTAVISGATGAHPA  312 (398)
T ss_pred             eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC--C----C-ChHHHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCc
Confidence            59999999999999999999999999999964332  1    1 345789999999999999 89999999999999999


Q ss_pred             CHhhhhc------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCC
Q 045789           81 DLREYQA------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQF  154 (206)
Q Consensus        81 D~~E~~a------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (206)
                      |..|..|      ++|+|.|+++||+.+|+|+++++.++++|++|+|||++|+   +|+              .|...+.
T Consensus       313 D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~---~~~--------------~~~~~~~  375 (398)
T PRK06519        313 TAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDA---SGE--------------KPMSGAA  375 (398)
T ss_pred             cHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCC---Ccc--------------cCccccc
Confidence            9999988      6899999999999999999999999999999999999986   222              1222333


Q ss_pred             CeEEEEEeecccceeEEEccc
Q 045789          155 KTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       155 ~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      ...++++.+++|.-...+++.
T Consensus       376 ~~~~~~~~~~~~~~~~~~~~~  396 (398)
T PRK06519        376 REAVVTTVGHWRGEGMALVEA  396 (398)
T ss_pred             cEEEEEeeccCCcceeEEEEe
Confidence            446666667777766666553

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=99.94  E-value=6.1e-28  Score=181.25  Aligned_cols=105  Identities=35%  Similarity=0.552  Sum_probs=89.8

Q ss_pred             eEEEEEEEecCCC-CCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-------------ce
Q 045789           24 YAEILDGSLTCDA-YHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-------------LR   89 (206)
Q Consensus        24 ~a~I~g~~~~~dg-~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-------------~~   89 (206)
                      ||+|+|+++++|| .+.+.+.|++.++.++|+++|++++++|+||+|||+||+||+.+|..|..+             ++
T Consensus         1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~   80 (119)
T PF02801_consen    1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP   80 (119)
T ss_dssp             SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred             CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence            8999999999999 788899999999999999999999999999999999999999999999988             58


Q ss_pred             eccccccccccccccchHHHHHHHHHhhhcccCCCCCCC
Q 045789           90 MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLE  128 (206)
Q Consensus        90 v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~  128 (206)
                      |+++|+++||++++||+++|++++++|++++|||++||+
T Consensus        81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~  119 (119)
T PF02801_consen   81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE  119 (119)
T ss_dssp             EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred             eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence            999999999999999999999999999999999999975

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=99.90  E-value=6.6e-23  Score=177.01  Aligned_cols=165  Identities=30%  Similarity=0.466  Sum_probs=143.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||++.+.|.++|.++|++|.++....++.......+....+.++++++|+++|++++||+|++.|+++++..
T Consensus       159 ~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~  238 (332)
T cd00825         159 FGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG  238 (332)
T ss_pred             EEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC
Confidence            48999999999999999999999999999999988876555567788899999999999999999999999999999999


Q ss_pred             CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789           81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (206)
                      |..|..+         +++.+.|.++||+.+|++++.|++++..++++.+||++|+.++++...  .    +..  ..++
T Consensus       239 ~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~--~----~~~--~~~~  310 (332)
T cd00825         239 DVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGL--N----IVT--ETTP  310 (332)
T ss_pred             CHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcccC--c----ccC--CCCC
Confidence            9999877         368899999999999999999999999999999999999999987221  1    122  2344


Q ss_pred             CCCCeEEEEEeecccceeEEEc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYM  173 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl  173 (206)
                      .+.++.+.++.++||+++|+|+
T Consensus       311 ~~~~~~l~~~~G~Gg~~~~~vl  332 (332)
T cd00825         311 RELRTALLNGFGLGGTNATLVL  332 (332)
T ss_pred             CCCCEEEEeeecCCCeeEEEeC
Confidence            4556777777789999999986

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=99.85  E-value=3.6e-21  Score=168.86  Aligned_cols=121  Identities=21%  Similarity=0.201  Sum_probs=108.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCC-CCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITA-PHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~   79 (206)
                      +|||++++||++.++|++++++||+  .|++.+.++.+... ..+++.++.++|+++|+++|++++||+||++|++||+.
T Consensus       189 ~GEGA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~  266 (348)
T PRK06147        189 PGEAAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQY  266 (348)
T ss_pred             eeceEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCcc
Confidence            5999999999999999999999999  67777777653332 22378999999999999999999999999999999999


Q ss_pred             CCHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCC
Q 045789           80 GDLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP  123 (206)
Q Consensus        80 ~D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp  123 (206)
                      +|..|..+           .++.+.|+++||+.+|+|+++++.++++|++|++|+
T Consensus       267 ~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g  321 (348)
T PRK06147        267 RFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPG  321 (348)
T ss_pred             chHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCC
Confidence            99999876           568899999999999999999999999999999985

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.78  E-value=3.7e-18  Score=142.02  Aligned_cols=146  Identities=29%  Similarity=0.438  Sum_probs=127.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||++.+.+.+++.+++++|.++....++.... ..+......++++++|+++|++++||++++.|.+++...
T Consensus       100 ~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~  178 (254)
T cd00327         100 FGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIG  178 (254)
T ss_pred             ecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccc
Confidence            5899999999999999999999999999998877765422 345678899999999999999999999999999999999


Q ss_pred             CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789           81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (206)
                      |..|..+         +++.+.+..+||+.+|+++..+.+++..++.+.+||.                          +
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~--------------------------~  232 (254)
T cd00327         179 DAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT--------------------------P  232 (254)
T ss_pred             cHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC--------------------------C
Confidence            9998876         3678999999999999999999999999999999981                          1


Q ss_pred             CCCCeEEEEEeecccceeEEEc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYM  173 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl  173 (206)
                      .+..+.+.++.++||+++++|+
T Consensus       233 ~~~~~~l~~~~g~Gg~~~~~~l  254 (254)
T cd00327         233 REPRTVLLLGFGLGGTNAAVVL  254 (254)
T ss_pred             CCcCEEEEeeEcCCCcceEEEC
Confidence            2334567777789999999985

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.60  E-value=3.6e-15  Score=132.52  Aligned_cols=135  Identities=23%  Similarity=0.333  Sum_probs=107.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++++++++++|+|++.+.++..     .......++++++|+++||+|+|||++|+|.+.+.. 
T Consensus       244 ~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~-  317 (386)
T cd00751         244 INDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQ-  317 (386)
T ss_pred             CCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEeechhHHH-
Confidence            48999999999999999999999999999999876532     234456799999999999999999999999887641 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCC
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQ  153 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (206)
                      .....+.       +++...+..+||+.+|+|+..+++++++|+..                                 .
T Consensus       318 ~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~---------------------------------~  364 (386)
T cd00751         318 ALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR---------------------------------G  364 (386)
T ss_pred             HHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc---------------------------------C
Confidence            2222221       45566666889999999999999999999853                                 1


Q ss_pred             CCeEEEEEeecccceeEEEcc
Q 045789          154 FKTRFVLISFNGSFLSSLYMA  174 (206)
Q Consensus       154 ~~~~~~~~~~~gG~n~~~vl~  174 (206)
                      .++.++...+.||..+++|||
T Consensus       365 ~~~gl~~~~~~gg~g~~~~ie  385 (386)
T cd00751         365 GRYGLATMCIGGGQGAAMVIE  385 (386)
T ss_pred             CCEEEEEEcccccceEEEEEE
Confidence            233555556688999999987

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=99.56  E-value=1.7e-14  Score=128.32  Aligned_cols=113  Identities=27%  Similarity=0.386  Sum_probs=92.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++++.+++++|.|++...+.     +.+......++++++|+++||+|+|||++|.|.+.+.. 
T Consensus       245 ~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa~~-  318 (386)
T TIGR01930       245 LNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVD-----PEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQ-  318 (386)
T ss_pred             CCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CccccccHHHHHHHHHHHcCCCHHHCCeeehcchhHHH-
Confidence            589999999999999999999999999999887431     22234455799999999999999999999999888742 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      ..+..++       +++.+.+..+||+.+++|+..++.++++|+..
T Consensus       319 ~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~  364 (386)
T TIGR01930       319 VLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR  364 (386)
T ss_pred             HHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc
Confidence            2222221       55677777899999999999999999999864

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=99.56  E-value=2.7e-14  Score=127.34  Aligned_cols=107  Identities=26%  Similarity=0.372  Sum_probs=90.8

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|.+++++|.|++....     .+.+.+.+..++++++|+++|++++|||++|+|.+.+   
T Consensus       250 ~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~f~---  321 (393)
T PRK05656        250 LNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEAFA---  321 (393)
T ss_pred             CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCccH---
Confidence            58999999999999999999999999999987642     3344456778999999999999999999999997643   


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhh
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQ  117 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~  117 (206)
                        .|..+           +++.+.|..+||+.+|+|+..++.++..|+
T Consensus       322 --~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~  367 (393)
T PRK05656        322 --AQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMI  367 (393)
T ss_pred             --HHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHH
Confidence              22222           678899999999999999999999998665

>PRK05790 putative acyltransferase; Provisional

Probab=99.51  E-value=1.9e-13  Score=121.78  Aligned_cols=138  Identities=22%  Similarity=0.309  Sum_probs=105.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.+.+++++|+|++.....     +.....+...+++++|+++|++++|||++|.|...+...
T Consensus       250 ~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~~  324 (393)
T PRK05790        250 INDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVD-----PAIMGIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQA  324 (393)
T ss_pred             CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCC-----CCccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHHH
Confidence            479999999999999999999999999999887432     122234567899999999999999999999886655311


Q ss_pred             -CHhhhhc-----ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCC
Q 045789           81 -DLREYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQF  154 (206)
Q Consensus        81 -D~~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (206)
                       -..|...     +++.+.+..+||+.+|+|+..++.++.+|+..                                 +.
T Consensus       325 l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~---------------------------------~~  371 (393)
T PRK05790        325 LAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR---------------------------------GA  371 (393)
T ss_pred             HHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc---------------------------------CC
Confidence             0011111     56677778889999999999999999999863                                 11


Q ss_pred             CeEEEEEeecccceeEEEcccc
Q 045789          155 KTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       155 ~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      ++.++..-+.+|..+++|||.|
T Consensus       372 ~~gl~~~~~~~g~g~~~~~e~~  393 (393)
T PRK05790        372 KKGLATLCIGGGQGVALIVERP  393 (393)
T ss_pred             CeEEEEEeccCCceeEEEEEcC
Confidence            2344555567899999998864

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=99.47  E-value=2.4e-13  Score=121.29  Aligned_cols=111  Identities=26%  Similarity=0.317  Sum_probs=90.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.+.+++++|+|++...+.     +...+.....+++++|+++|++++||||+|.|...+. .
T Consensus       251 ~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~-~  324 (394)
T PRK06445        251 LNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVP-----PAIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAV-V  324 (394)
T ss_pred             CCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CchhcchHHHHHHHHHHHcCCCHHHcCEEEecccchH-H
Confidence            589999999999999999999999999999887542     2233456788999999999999999999999988774 2


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQ  117 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~  117 (206)
                      ....++.       +++..-.-.+||+.+|+|+..++.++.+|+
T Consensus       325 ~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~  368 (394)
T PRK06445        325 VLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQ  368 (394)
T ss_pred             HHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHH
Confidence            2333333       344444555799999999999999999997

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=99.47  E-value=7.6e-14  Score=124.35  Aligned_cols=113  Identities=23%  Similarity=0.281  Sum_probs=91.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|.+++++|+|++...+..     ...+....++++++|+++||+|+||||+|.|...+...
T Consensus       249 ~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~-----~~~~~~~~~a~~~Al~~AGl~p~DID~~ei~dafa~~~  323 (392)
T PRK06633        249 INDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDP-----SIMGTAPVPASQKALSKAGWSVNDLEVIEVNEAFAAQS  323 (392)
T ss_pred             ccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCc-----chhchHHHHHHHHHHHHcCCCHHHcCeeehhhHHHHHH
Confidence            5899999999999999999999999999998875422     22235568899999999999999999999886654321


Q ss_pred             CHh-hh-----hcceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLR-EY-----QALRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~-E~-----~a~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      =.. |.     .-+++.+.|..+||+.+|+|+..++.++++|+.
T Consensus       324 l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~  367 (392)
T PRK06633        324 IYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRR  367 (392)
T ss_pred             HHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHh
Confidence            110 10     016778889999999999999999999999975

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=99.45  E-value=5.7e-13  Score=118.86  Aligned_cols=112  Identities=21%  Similarity=0.310  Sum_probs=87.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++++.+++++|+|++...+....     ......++++++|+++|++++||||+|.|...+.. 
T Consensus       250 ~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agi~~~Did~~Ei~d~f~~~-  323 (394)
T PLN02644        250 ISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPEL-----FTTAPALAIPKALKHAGLEASQVDYYEINEAFSVV-  323 (394)
T ss_pred             CCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcc-----cchhHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHH-
Confidence            489999999999999999999999999999987653211     11233579999999999999999999987655431 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      .....+.       +++..-+..+||+.+|+|+..+++++.+|+.
T Consensus       324 ~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~  368 (394)
T PLN02644        324 ALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRS  368 (394)
T ss_pred             HHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHh
Confidence            1111111       4556666678999999999999999999975

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=99.44  E-value=4.5e-13  Score=119.70  Aligned_cols=113  Identities=25%  Similarity=0.347  Sum_probs=89.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|.+++++|.|++....     .+.+.+.+...+++++|+++|++++|||+||.|...+...
T Consensus       255 ~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~iei~dafa~~~  329 (400)
T PRK13359        255 VNDGACALLLASEAAARRHGLKPRARVLGIATAGV-----EPRVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQG  329 (400)
T ss_pred             ccCceEEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCCccchhHHHHHHHHHHHhCCCHHHcCcCccCcHhHHHH
Confidence            58999999999999999999999999999988632     2344566778999999999999999999999764443210


Q ss_pred             CH-hhhhc-----ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           81 DL-REYQA-----LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~-~E~~a-----~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      =. .|...     .++...++.  +||+.+|+|+..++.++.+|+.
T Consensus       330 l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~  375 (400)
T PRK13359        330 LAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLER  375 (400)
T ss_pred             HHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhh
Confidence            00 01110     478888886  7999999999999999988864

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=99.44  E-value=4.4e-13  Score=119.77  Aligned_cols=106  Identities=22%  Similarity=0.410  Sum_probs=88.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|.+++++|+|++...+.     +...+.+...+++++|+++||+++|||++|.|       
T Consensus       256 ~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~-----~~~~~~~~~~A~~~al~~Agi~~~did~~ei~-------  323 (399)
T PRK09052        256 TSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVP-----PEIMGIGPIEAIPAALKQAGLKQDDLDWIELN-------  323 (399)
T ss_pred             CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccC-----CCccchhHHHHHHHHHHHcCCCHHHcCEEEeC-------
Confidence            589999999999999999999999999999887542     23334566899999999999999999999966       


Q ss_pred             CHhhhhc-----------ceeccccc--cccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-----------LRMNSTKS--LIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      |..+...           .++...++  .+||+.+++|+..++.++++|++
T Consensus       324 D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~  374 (399)
T PRK09052        324 EAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRR  374 (399)
T ss_pred             cHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHh
Confidence            4433322           35666666  67999999999999999999976

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=99.43  E-value=4.8e-13  Score=118.98  Aligned_cols=117  Identities=22%  Similarity=0.325  Sum_probs=94.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCC-C-CChHHHHHHHHHHHHHcCCCccccccccccCCCCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAP-H-PEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR   78 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~-~-~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~   78 (206)
                      ++||++++||++++.|+++++++ .+|+|++...+..+.... + +.......+++++|+++||+++|||++|+|++++.
T Consensus       211 ~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~  289 (389)
T PRK06064        211 ITDGAAAVILASEEKAKEYTDTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI  289 (389)
T ss_pred             CCCcceEEEEecHHHHHHhcCCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH
Confidence            58999999999999999987654 599999988776543221 1 23466778999999999999999999999999996


Q ss_pred             cCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789           79 LGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        79 ~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                       .+.++.+.                       ++|....+.  .||+.+++|+..++.++.+|+..
T Consensus       290 -~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~  354 (389)
T PRK06064        290 -AEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGE  354 (389)
T ss_pred             -HHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCC
Confidence             34555444                       256555555  69999999999999999999875

>PRK09051 beta-ketothiolase; Provisional

Probab=99.42  E-value=3.6e-13  Score=120.14  Aligned_cols=112  Identities=24%  Similarity=0.351  Sum_probs=88.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|.+++++|+|++...+..     .........+++++|+++||+++|||+||+|.+.+.. 
T Consensus       251 ~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~agi~~~did~~ei~d~f~~~-  324 (394)
T PRK09051        251 INDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDP-----EYMGIGPVPATQKALERAGLTVADLDVIEANEAFAAQ-  324 (394)
T ss_pred             CCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC-----CcccccHHHHHHHHHHHcCCCHHHcCEEEecCccHHH-
Confidence            5799999999999999999999999999998875422     2334566889999999999999999999999764431 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      .....+.       +++.+-+..+||+.+|+|+..++.++.+|+.
T Consensus       325 ~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~  369 (394)
T PRK09051        325 ACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQR  369 (394)
T ss_pred             HHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHh
Confidence            1111111       3334444458999999999999999999975

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=99.41  E-value=6.4e-13  Score=118.45  Aligned_cols=106  Identities=24%  Similarity=0.371  Sum_probs=88.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.|.+++++|+|++...+..     ...+.+...+++++|+++||+++|||+||.|       
T Consensus       248 ~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~~ei~-------  315 (391)
T PRK07661        248 MSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPP-----EVMGIGPIAAIPKALKLAGLELSDIGLFELN-------  315 (391)
T ss_pred             CCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCC-----cccchHHHHHHHHHHHHcCCCHHHCCEEEeC-------
Confidence            5899999999999999999999999999999875422     2234467899999999999999999999966       


Q ss_pred             CHhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      |..+...             +++.+-+..+||+.+|+|+..++.++.+|++
T Consensus       316 d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~  366 (391)
T PRK07661        316 EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR  366 (391)
T ss_pred             CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHh
Confidence            4444333             4556667778999999999999999999975

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=99.40  E-value=1.3e-12  Score=116.84  Aligned_cols=113  Identities=26%  Similarity=0.398  Sum_probs=88.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|.+++++|+|++.....     +.+.+.+...+++++|+++||+++||||+|.|...+...
T Consensus       255 ~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~DID~~ei~D~f~~~~  329 (400)
T TIGR02430       255 VNDGAAALLLASEEAVQRHGLTPRARILAAATAGVE-----PRIMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQA  329 (400)
T ss_pred             cCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CccccchHHHHHHHHHHHhCCCHHHCCCcccCcHHHHHH
Confidence            589999999999999999999999999999876532     223445678999999999999999999999664433210


Q ss_pred             C-Hhhhhc-----ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           81 D-LREYQA-----LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D-~~E~~a-----~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      = ..|...     .++...++.  +||+.+++|+..++.++.+|+.
T Consensus       330 l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~  375 (400)
T TIGR02430       330 LAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLER  375 (400)
T ss_pred             HHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHh
Confidence            0 001111     478888885  7999999999999999999974

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=99.38  E-value=9.7e-13  Score=117.60  Aligned_cols=113  Identities=23%  Similarity=0.278  Sum_probs=89.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|.+++++|.|++...+....     ...+...+++++|+++|++++|||++|.|...+...
T Consensus       259 ~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~AGl~~~DID~~ei~daFa~~~  333 (402)
T PRK08242        259 IVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTI-----MLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVV  333 (402)
T ss_pred             CCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----hcccHHHHHHHHHHHcCCCHHHCCEEEecchhhHHH
Confidence            579999999999999999999999999999887553221     123346799999999999999999999886655311


Q ss_pred             CH-hhhhc-----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DL-REYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~-~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      -. .|...     +++.+.+..+||+.+|+|+..++.++.+|++
T Consensus       334 l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~  377 (402)
T PRK08242        334 LRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELER  377 (402)
T ss_pred             HHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHh
Confidence            11 01111     5677778889999999999999999999975

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=99.35  E-value=1.7e-12  Score=115.78  Aligned_cols=112  Identities=19%  Similarity=0.239  Sum_probs=90.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.|.+++++|+|++...+.     +++.+.+...+++++|+++|++++|||++|.|...+.. 
T Consensus       249 ~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~Did~~ei~eafa~~-  322 (392)
T PRK07108        249 FSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCE-----PDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQ-  322 (392)
T ss_pred             CCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CcccchhHHHHHHHHHHHcCCCHHHcCchHhhhHHHHH-
Confidence            589999999999999999999999999999887542     23344566899999999999999999999988665432 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      .....+.       +++.+-+..+||+.+++|+.-++.++..|++
T Consensus       323 ~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~  367 (392)
T PRK07108        323 VLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKR  367 (392)
T ss_pred             HHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHh
Confidence            1111111       5677777889999999999999999999975

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=99.34  E-value=2.1e-12  Score=115.35  Aligned_cols=112  Identities=22%  Similarity=0.322  Sum_probs=89.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.|.+++++|.|++...+...     ....+...+++++|+++||+++|||++|.|...+.. 
T Consensus       254 ~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~Did~~ei~d~fa~~-  327 (397)
T PRK06954        254 ISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPS-----KFTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVV-  327 (397)
T ss_pred             CCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcc-----cccchHHHHHHHHHHHcCCCHHHCCEEehhhHHHHH-
Confidence            58999999999999999999999999999876533211     112345789999999999999999999999877641 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ....++.       +++.+-+..+||+.+|+|+..++.++.+|+.
T Consensus       328 ~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~  372 (397)
T PRK06954        328 TMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRA  372 (397)
T ss_pred             HHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHh
Confidence            1111111       5677788889999999999999999999975

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=99.33  E-value=7e-12  Score=111.40  Aligned_cols=112  Identities=21%  Similarity=0.293  Sum_probs=86.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.+++++|.+++...+.....     ..+...+++++|+++||+++|||++|.|.+.+.. 
T Consensus       239 ~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~a~~~a~~~agi~~~did~~e~~d~Fa~~-  312 (382)
T PRK07801        239 ISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFM-----LTAPIPATRYALEKTGLSIDDIDVVEINEAFAPV-  312 (382)
T ss_pred             CCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhh-----ccChHHHHHHHHHHcCCCHHHcCEeeecccchHH-
Confidence            4799999999999999999988899999987665421101     1122578999999999999999999999887742 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ....++.       ++...-...+||+.+|+|+..++.++.+|+.
T Consensus       313 ~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~  357 (382)
T PRK07801        313 VLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELER  357 (382)
T ss_pred             HHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHh
Confidence            1122222       4455555567999999999999999999986

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=99.33  E-value=2e-12  Score=115.76  Aligned_cols=112  Identities=21%  Similarity=0.347  Sum_probs=90.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.+++++|+|++...+..     .+...+...+++++|++|||+++|||++|.|.+.+.. 
T Consensus       262 ~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~~~did~~ei~d~f~~~-  335 (406)
T PRK07851        262 LNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSP-----EIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQ-  335 (406)
T ss_pred             cCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCC-----CccchhHHHHHHHHHHHhCCCHHHCCeehhhhHHHHH-
Confidence            5899999999999999999999999999998764421     2233457889999999999999999999988665531 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ....+++       +++.+.+..+||+.+++|+..++.++.+|++
T Consensus       336 ~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~  380 (406)
T PRK07851        336 VLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQT  380 (406)
T ss_pred             HHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHh
Confidence            1121122       4567777778999999999999999999975

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=99.33  E-value=1.2e-11  Score=110.15  Aligned_cols=112  Identities=21%  Similarity=0.312  Sum_probs=83.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.+++++++|+|++.+.....     ..+.....+++++|+++||+|+||||+|+|...+.. 
T Consensus       239 ~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~-  312 (385)
T TIGR02445       239 LSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPS-----IMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ-  312 (385)
T ss_pred             cCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHH-
Confidence            58999999999999999999999999999988743221     112245789999999999999999999999887642 


Q ss_pred             CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ....++.          +++..-.-.+||+.+|+|+..++.++..+++
T Consensus       313 ~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~  360 (385)
T TIGR02445       313 ALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ  360 (385)
T ss_pred             HHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh
Confidence            1121121          2222223346999999998888888755543

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.32  E-value=1.4e-11  Score=109.80  Aligned_cols=112  Identities=22%  Similarity=0.317  Sum_probs=86.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+++++++|.|++.+.+...     ........+++++|+++|++|+|||++|.|...+.. 
T Consensus       241 ~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~-  314 (387)
T PRK08947        241 LSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPS-----IMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ-  314 (387)
T ss_pred             cCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcc-----cccccHHHHHHHHHHHcCCCHHHCCEEEecccchHH-
Confidence            58999999999999999999999999999998743221     112234788999999999999999999999887642 


Q ss_pred             CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ....++.          +++..-.-.+||+.+|+|+..++.++.+|+.
T Consensus       315 ~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~  362 (387)
T PRK08947        315 SLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER  362 (387)
T ss_pred             HHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh
Confidence            1111111          2333444457999999999999999999975

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.32  E-value=1.2e-11  Score=110.73  Aligned_cols=113  Identities=22%  Similarity=0.334  Sum_probs=88.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.+++++|.|++...+...     ..+.+...+++++|+++||+++|||++|.|...+.. 
T Consensus       257 ~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~Did~~ei~d~f~~~-  330 (404)
T PRK06205        257 QNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPS-----RMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQ-  330 (404)
T ss_pred             CCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCc-----cccccHHHHHHHHHHHcCCCHHHCCEeeeccHHHHH-
Confidence            47999999999999999999999999999988755322     122356889999999999999999999988665431 


Q ss_pred             CHhhhh----------cceeccccccccccccccchHHHHHHHHHhhhc
Q 045789           81 DLREYQ----------ALRMNSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        81 D~~E~~----------a~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      .....+          -+++.+-+..+||+.+|+|+..++.++.+|+..
T Consensus       331 ~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~  379 (404)
T PRK06205        331 VLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR  379 (404)
T ss_pred             HHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc
Confidence            011111          144555566689999999999999999999863

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=99.32  E-value=6.8e-12  Score=112.21  Aligned_cols=113  Identities=26%  Similarity=0.340  Sum_probs=88.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.|.+++++|+|++...+..     ...+.+...+++++|+++||+++|||++|.|...+...
T Consensus       256 ~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~DId~~ei~D~f~~~~  330 (401)
T PRK09050        256 VNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEP-----RIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQG  330 (401)
T ss_pred             CcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC-----ccccchHHHHHHHHHHHcCCCHHHCCccccCcHhHHHH
Confidence            5899999999999999999999999999998875422     22334567899999999999999999999775543210


Q ss_pred             C-Hhhhhc-----ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           81 D-LREYQA-----LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D-~~E~~a-----~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      = ..|...     .++...++.  +||+.+++|+..++.++.+|+.
T Consensus       331 l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~  376 (401)
T PRK09050        331 LAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLER  376 (401)
T ss_pred             HHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHh
Confidence            0 001111     467888886  7999999999999999999974

>PLN02287 3-ketoacyl-CoA thiolase

Probab=99.32  E-value=3.6e-12  Score=115.50  Aligned_cols=112  Identities=20%  Similarity=0.305  Sum_probs=88.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.+.+|++++.++.....     .+...+.+..++++++|+++||+++|||++|.|...+...
T Consensus       290 ~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~-----~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~  364 (452)
T PLN02287        290 VSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGV-----DPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQF  364 (452)
T ss_pred             cCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccC-----CCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHH
Confidence            58999999999999999999999999999874321     1333455678999999999999999999999996655321


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                       ...++.       +++.+-+..+||+.+|+|+..++.++.+|++
T Consensus       365 -l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~  408 (452)
T PLN02287        365 -VYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR  408 (452)
T ss_pred             -HHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHh
Confidence             111111       4566666678999999999999999999975

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=99.30  E-value=6.9e-12  Score=112.17  Aligned_cols=112  Identities=29%  Similarity=0.412  Sum_probs=89.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.+++++|.|++...+..     ...+.+...+++++|+++||+++|||++|.|...+.. 
T Consensus       255 ~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~a~~~agl~~~did~~ei~d~Fa~~-  328 (401)
T PRK08131        255 INDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEP-----RIMGIGPVEAIKKALARAGLTLDDMDIIEINEAFASQ-  328 (401)
T ss_pred             CCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCC-----ccccchHHHHHHHHHHHcCCCHHHCCeehhccHHHHH-
Confidence            5899999999999999999999999999998876522     2223456899999999999999999999999777653 


Q ss_pred             CHhhhhc-------ceeccccc--cccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKS--LIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      .....+.       .+|....+  .+||+.+|+|+..++.++.+|+.
T Consensus       329 ~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~  375 (401)
T PRK08131        329 VLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQR  375 (401)
T ss_pred             HHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHh
Confidence            1111111       35555566  36999999999999999999975

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=99.30  E-value=4.8e-12  Score=112.89  Aligned_cols=113  Identities=23%  Similarity=0.282  Sum_probs=87.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.+.+++++|.|++...+....     .......+++++|+++||+++|||++|.|...+...
T Consensus       250 ~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~did~~e~~d~f~~~~  324 (393)
T PRK08235        250 VNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-----FPRTPGYAINALLEKTGKTVEDIDLFEINEAFAAVA  324 (393)
T ss_pred             CCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-----hcchHHHHHHHHHHHhCCCHHHCCeehhcchhHHHH
Confidence            589999999999999999999999999998765432211     112345899999999999999999999886655311


Q ss_pred             CH-hhhhc-----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DL-REYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~-~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      =. .|...     +++.+-+..+||+.+|+|+..++.++.+|+.
T Consensus       325 l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~  368 (393)
T PRK08235        325 LASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKR  368 (393)
T ss_pred             HHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHh
Confidence            00 11111     5667777788999999999999999999975

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=99.29  E-value=1.5e-11  Score=109.50  Aligned_cols=115  Identities=26%  Similarity=0.378  Sum_probs=90.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCC-ChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHP-EGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~-~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~   79 (206)
                      ++||++++||.+++.|++.+.  +++|+|++...+.......++ ...+...+++++|+++||+|+|||++|.|.+++..
T Consensus       215 ~~DGAaa~il~s~~~a~~~~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~  292 (389)
T PRK07516        215 VSDGAAALVLADAETARALQR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA  292 (389)
T ss_pred             cCcceEEEEEecHHHHHhcCC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH
Confidence            589999999999999988753  678999998877554323232 34667789999999999999999999999999875


Q ss_pred             CCHhhhhc-----------------------ceec---cccccccccccccchHHHHHHHHHhhhc
Q 045789           80 GDLREYQA-----------------------LRMN---STKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        80 ~D~~E~~a-----------------------~~v~---s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                       ...+.++                       ++|.   ..+ .+||+.+|+|+..++.++++|+..
T Consensus       293 -~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~l-a~Ghp~gasG~~~~~e~~~QL~g~  356 (389)
T PRK07516        293 -ELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLK-AKGHPIGATGVSMHVLAAMQLTGE  356 (389)
T ss_pred             -HHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcc-cCCCCccHHHHHHHHHHHHHhcCC
Confidence             3333333                       2443   233 379999999999999999999864

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=99.27  E-value=1.6e-11  Score=108.29  Aligned_cols=117  Identities=22%  Similarity=0.292  Sum_probs=93.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCC--CChHHHHHHHHHHHHHcCCCccccccccccCCCCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPH--PEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR   78 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~--~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~   78 (206)
                      ++||++++||.+++.|++. .+++++|+|++...+........  ....+...+++++|++|||+++|||++|.|.+.+.
T Consensus       204 ~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~  282 (375)
T cd00829         204 VSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTI  282 (375)
T ss_pred             CCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH
Confidence            5899999999999999988 67899999999988876543333  25678889999999999999999999999999875


Q ss_pred             cCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789           79 LGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        79 ~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      . ....++.                       ++|....+.  .||+.+++|+..++.++.+|+..
T Consensus       283 ~-~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~  347 (375)
T cd00829         283 A-ELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGE  347 (375)
T ss_pred             H-HHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCC
Confidence            3 2222222                       245444444  59999999999999999999864

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=99.26  E-value=2.4e-11  Score=107.99  Aligned_cols=115  Identities=18%  Similarity=0.174  Sum_probs=89.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCC-CCCCh-HHHHHHHHHHHHHcCCCccccccccccCCCCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITA-PHPEG-VGMVSCMEKALAKSGVAKEDVNYINAHAPSTR   78 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-~~~~~-~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~   78 (206)
                      ++||++++||.+++.|++.+.+++++|+|++...+...... ++... .....+++++|+++|++++|||++|.|.+++.
T Consensus       209 ~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~  288 (385)
T PRK12578        209 ISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTI  288 (385)
T ss_pred             cCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH
Confidence            47999999999999999888667899999998776543221 12222 35678999999999999999999999999884


Q ss_pred             cCCHhhhhc--------------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789           79 LGDLREYQA--------------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        79 ~~D~~E~~a--------------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                          .|..+                          ++|...-+.  .||+.+|+|+..++.++.+|+..
T Consensus       289 ----~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~  353 (385)
T PRK12578        289 ----AEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDE  353 (385)
T ss_pred             ----HHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCC
Confidence                33332                          244333333  59999999999999999999853

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=99.25  E-value=2.3e-11  Score=108.92  Aligned_cols=113  Identities=22%  Similarity=0.279  Sum_probs=88.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|++.|.+++++|.|++...+....     .+.+...+++++|+++|++++|||++|.|...+...
T Consensus       274 ~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~-----~~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~  348 (417)
T PRK06025        274 VVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL-----MLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVA  348 (417)
T ss_pred             CCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----hcccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHH
Confidence            489999999999999999999999999999887553221     122346899999999999999999999886654321


Q ss_pred             CHh-hhhc-----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLR-EYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~-E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ... |...     +++..-+..+||+.+++|+..++.++..|+.
T Consensus       349 l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~  392 (417)
T PRK06025        349 EKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELER  392 (417)
T ss_pred             HHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHH
Confidence            111 0000     5566666778999999999999999999865

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=99.19  E-value=6.8e-11  Score=105.37  Aligned_cols=112  Identities=21%  Similarity=0.289  Sum_probs=86.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.++.++|.|++...+..     .....+...+++++|+++|++++|||++|.|...+.. 
T Consensus       244 ~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~~ei~d~F~~~-  317 (387)
T PRK07850        244 ISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEP-----YYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASV-  317 (387)
T ss_pred             cCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCc-----hhhcchHHHHHHHHHHHcCCCHHHcCeeeecccchHH-
Confidence            5899999999999999999988899999998643221     1123455789999999999999999999999887643 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      .....+.       +++..-.-.+||+.+++|+..++.++.+|+.
T Consensus       318 ~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~  362 (387)
T PRK07850        318 VLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELER  362 (387)
T ss_pred             HHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHh
Confidence            1111111       3344444457999999999999999999975

>PRK06158 thiolase; Provisional

Probab=99.18  E-value=8.9e-11  Score=104.45  Aligned_cols=115  Identities=15%  Similarity=0.192  Sum_probs=84.8

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCC-CCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHIT-APHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~   79 (206)
                      ++||++++||.+++.|++.++++ ..|.|++...+..... .++.......++++++|++|||+|+|||++|.|.+.+..
T Consensus       208 ~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~  286 (384)
T PRK06158        208 VTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTIN  286 (384)
T ss_pred             ccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHH
Confidence            48999999999999998876553 6688887766543321 122234556789999999999999999999999998752


Q ss_pred             CCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           80 GDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        80 ~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                       ..+.+++                       +|+...-+.  .||+ +++|+..++.++++|+.
T Consensus       287 -~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg  348 (384)
T PRK06158        287 -TILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRG  348 (384)
T ss_pred             -HHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcC
Confidence             2222222                       344333333  4999 99999999999999975

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=99.15  E-value=8.5e-11  Score=104.76  Aligned_cols=112  Identities=17%  Similarity=0.191  Sum_probs=84.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.++.++|+|++.........     ......+.+++|+++||+++|||++|.|...+.. 
T Consensus       244 ~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~-----~~~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~~-  317 (388)
T PRK06366        244 LSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDF-----VEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIA-  317 (388)
T ss_pred             cccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHh-----cccHHHHHHHHHHHcCCCHHHcceeeccchhHHH-
Confidence            4799999999999999998988888999998775422111     1123689999999999999999999999887752 


Q ss_pred             CHhhhhcceec-------cccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQALRMN-------STKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a~~v~-------s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ....++++.+.       .---.+||+.+|+|+..++.++.+|+.
T Consensus       318 ~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~  362 (388)
T PRK06366        318 SIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKT  362 (388)
T ss_pred             HHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHh
Confidence            22222222222       111226999999999999999999975

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=99.13  E-value=4.3e-10  Score=100.33  Aligned_cols=112  Identities=21%  Similarity=0.261  Sum_probs=84.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.++..+|.++....+..     .........+++++|+++|++++|||++|.|...+.. 
T Consensus       247 ~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~-----~~~~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~~-  320 (390)
T PRK06504        247 ICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDP-----VIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASV-  320 (390)
T ss_pred             CCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCc-----hhhhccHHHHHHHHHHHcCCCHHHCCEEEecccchHH-
Confidence            4799999999999999998888877888877654321     1112344679999999999999999999999887753 


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      .....+.       +++..-.-.+||+.+|+|+..+...+.+|+.
T Consensus       321 ~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~  365 (390)
T PRK06504        321 PLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQ  365 (390)
T ss_pred             HHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHh
Confidence            1222222       3344444457999999999999999988875

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=99.12  E-value=2.3e-10  Score=101.95  Aligned_cols=116  Identities=16%  Similarity=0.192  Sum_probs=87.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+ ++..+|+|++...+......++........+++++|++||++++|||++|.|.+.+.. 
T Consensus       210 ~~DGAaA~vl~s~~~A~~l~-~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~-  287 (388)
T PRK08142        210 VTDGGGALVVVRPEIARSLK-RPLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTIT-  287 (388)
T ss_pred             ccCceEEEEEecHHHHhhcC-CCCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHH-
Confidence            47999999999999998876 4568899998877654322333334556789999999999999999999999987753 


Q ss_pred             CHhhhhc------------------------ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA------------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a------------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ..+.+++                        +|+...-+.  .||+.+|+|+..++.++.+|+.
T Consensus       288 ~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG  351 (388)
T PRK08142        288 VLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRG  351 (388)
T ss_pred             HHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcC
Confidence            2222222                        334222222  4899999999999999999975

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=99.12  E-value=1.5e-10  Score=102.20  Aligned_cols=112  Identities=21%  Similarity=0.249  Sum_probs=86.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.|.++.++|.+++......     .....+...+++++|+++|++++|||++|.|.+.+...
T Consensus       217 ~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~  291 (361)
T PRK06690        217 VNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDP-----NLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKV  291 (361)
T ss_pred             CCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCc-----ccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHH
Confidence            4899999999999999999988888999988654321     11245678899999999999999999999997766533


Q ss_pred             CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ... .+.       +++..-.-.+||+.+++|+..++.++.++++
T Consensus       292 ~~~-~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~  335 (361)
T PRK06690        292 VAC-AKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKR  335 (361)
T ss_pred             HHH-HHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHH
Confidence            322 111       2333334446999999999999999988865

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.10  E-value=2.2e-10  Score=103.39  Aligned_cols=113  Identities=20%  Similarity=0.265  Sum_probs=84.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.+++++|.+++.......   .+ .......+++++|+++||+++|||++|.|.+.+.. 
T Consensus       267 ~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~---~~-~~~~~~~a~~~al~~AGl~~~DiD~~Ei~d~Fa~~-  341 (428)
T PRK08963        267 LTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVW---QD-MLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQ-  341 (428)
T ss_pred             CCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCch---hh-hhhHHHHHHHHHHHHcCCCHHHCCEEEEccccHHH-
Confidence            48999999999999999999999999999887542110   00 12334678999999999999999999999988743 


Q ss_pred             CHhhhh-------------------cc---eecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQ-------------------AL---RMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~-------------------a~---~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ...+++                   .+   +|...-+.  .||+.+++|+..++.++.+|+.
T Consensus       342 ~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~~~qLrg  403 (428)
T PRK08963        342 TLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRR  403 (428)
T ss_pred             HHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHHHhh
Confidence            001000                   02   34333333  5999999999999999999975

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=99.09  E-value=4.7e-10  Score=100.38  Aligned_cols=118  Identities=18%  Similarity=0.193  Sum_probs=87.3

Q ss_pred             CCceEEEEEEccchHHHhcCC-ceeEEEEEEEecCCCCCCC------CCCC-ChHHHHHHHHHHHHHcCCCccccccccc
Q 045789            1 MGEGAGVLLLEELEHAKKRGT-NIYAEILDGSLTCDAYHIT------APHP-EGVGMVSCMEKALAKSGVAKEDVNYINA   72 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~------~~~~-~~~~~~~~~~~al~~Agi~~~dI~~ve~   72 (206)
                      ++||++++||.+++.|++.+. ++.++|+|++...+.....      ..++ .......+.+++|++|||+++|||++|.
T Consensus       222 ~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el  301 (403)
T PRK06289        222 VTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEV  301 (403)
T ss_pred             CCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEee
Confidence            479999999999999988775 6778999998765532211      1111 2233567999999999999999999999


Q ss_pred             cCCCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789           73 HAPSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        73 hgtgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      |...+.. ..+.+++                       +++...-+.  .||+.+++|+..++.++.+|+..
T Consensus       302 ~D~fa~~-~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~  372 (403)
T PRK06289        302 HDCFTPS-EYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGT  372 (403)
T ss_pred             eccchHH-HHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhcc
Confidence            9987752 2222222                       345444443  49999999999999999999863

>PRK08256 lipid-transfer protein; Provisional

Probab=99.07  E-value=6.9e-10  Score=98.92  Aligned_cols=118  Identities=22%  Similarity=0.268  Sum_probs=87.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCC-C---C-ChHHHHHHHHHHHHHcCCCccccccccccCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAP-H---P-EGVGMVSCMEKALAKSGVAKEDVNYINAHAP   75 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~-~---~-~~~~~~~~~~~al~~Agi~~~dI~~ve~hgt   75 (206)
                      ++||++++||.+++.|++.+.+++++|.|++...+....... +   . .......+.+++|+++|++++|||++|+|.+
T Consensus       213 ~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~  292 (391)
T PRK08256        213 PTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDC  292 (391)
T ss_pred             CCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccC
Confidence            479999999999999988776788999998876653321111 1   1 1234568999999999999999999999998


Q ss_pred             CCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789           76 STRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        76 gt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      .+.. ....+++                       ++|...-+.  .||+.+|+|+..++.++++|+..
T Consensus       293 f~~~-~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~  360 (391)
T PRK08256        293 FSAN-ELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGT  360 (391)
T ss_pred             CcHH-HHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCC
Confidence            7752 1222222                       355444443  59999999999999999999753

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=99.06  E-value=7.7e-10  Score=98.55  Aligned_cols=118  Identities=12%  Similarity=0.165  Sum_probs=88.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCC-CCCCChHHHHHHHHHHHHHcCCC--ccccccccccCCCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHIT-APHPEGVGMVSCMEKALAKSGVA--KEDVNYINAHAPST   77 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-~~~~~~~~~~~~~~~al~~Agi~--~~dI~~ve~hgtgt   77 (206)
                      ++||++++||.+.+.|++.+.++..+|+|++...|..... ...........+++++|+++|++  ++|||++|.|.+.+
T Consensus       208 ~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~  287 (386)
T PRK08313        208 SSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFS  287 (386)
T ss_pred             CCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCCh
Confidence            4799999999999999987778888999998776543211 11223466778999999999998  69999999999977


Q ss_pred             CcCCHhhhhc-----------------------ceeccccccc-cccccccchHHHHHHHHHhhhc
Q 045789           78 RLGDLREYQA-----------------------LRMNSTKSLI-GHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        78 ~~~D~~E~~a-----------------------~~v~s~k~~~-Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      ... .+.+++                       ++|...-+.+ ||+.+++|+..++.++++|+..
T Consensus       288 ~~~-~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~  352 (386)
T PRK08313        288 WFE-PMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLSSNPIGASGMIRFAEAALQVMGK  352 (386)
T ss_pred             HHH-HHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccccCCCcHHHHHHHHHHHHHhccc
Confidence            521 111111                       3553333333 9999999999999999999753

>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=99.05  E-value=1.3e-10  Score=99.17  Aligned_cols=113  Identities=22%  Similarity=0.258  Sum_probs=84.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +.||++++||.+.+.+.+.|.+++|+|++|+-...........     ..-++.++|++||+..+||+|+|.+....-..
T Consensus       253 lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~ia-----P~laipk~lk~aG~~~sdVd~~EiNEAFs~v~  327 (396)
T KOG1390|consen  253 LNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIA-----PALAIPKALKKAGLEQSDVDYWEINEAFSVVV  327 (396)
T ss_pred             cCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccc-----hHHHHHHHHHHcCcchhhhhHHhhhhhhhHHH
Confidence            5799999999999999999999999999997654333222233     37789999999999999999999764333211


Q ss_pred             CHh--hhhc----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLR--EYQA----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~--E~~a----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      -..  ++.-    +.+..-.-.+||+.++||..-+...+..|+.
T Consensus       328 lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~  371 (396)
T KOG1390|consen  328 LANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ  371 (396)
T ss_pred             HHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence            110  0000    4444444458999999999999999998876

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=99.05  E-value=8e-10  Score=99.95  Aligned_cols=116  Identities=22%  Similarity=0.274  Sum_probs=84.8

Q ss_pred             CCceEEEEEEccchHHHhcCCce----eEEEEEEEecCCCCCCCC--CCCChHHHHHHHHHHHHHcCCCccccccccccC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNI----YAEILDGSLTCDAYHITA--PHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA   74 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i----~a~I~g~~~~~dg~~~~~--~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hg   74 (206)
                      ++||++++||.+++.|++.+.++    .++|++++...+......  ....+.. ..+++++|+++|++++|||++|.|.
T Consensus       258 ~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~d  336 (438)
T PTZ00455        258 VSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTS-RAAAQKALSMAGVKPSDLQVAEVHD  336 (438)
T ss_pred             ccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchHH-HHHHHHHHHHcCCCHHHCcEeeecc
Confidence            47999999999999999988776    689999988765321101  0111222 6899999999999999999999998


Q ss_pred             CCCCcCCHhhhhc-----------------------ceeccccc--cccccccccchHHHHHHHHHhhh
Q 045789           75 PSTRLGDLREYQA-----------------------LRMNSTKS--LIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        75 tgt~~~D~~E~~a-----------------------~~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      +.+.. ....++.                       ++|...-+  .+||+.+|+|+..++.++.+|+.
T Consensus       337 aFa~~-~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg  404 (438)
T PTZ00455        337 CFTIA-ELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKG  404 (438)
T ss_pred             cChHH-HHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhh
Confidence            87742 1111111                       23322222  35999999999999999999975

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=99.05  E-value=4.4e-10  Score=101.31  Aligned_cols=113  Identities=26%  Similarity=0.329  Sum_probs=84.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.++.++|.+++.......     ..+.+...+++++|+++||+++|||++|.|...+...
T Consensus       266 ~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~did~~ei~daFa~~~  340 (426)
T PRK08170        266 ITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPS-----QMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQV  340 (426)
T ss_pred             CCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCch-----hhcccHHHHHHHHHHHcCCCHHHcCEEEecchhHHHH
Confidence            48999999999999999999888889999876543221     1223456899999999999999999999998877421


Q ss_pred             C--Hhhhh-------------------cceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           81 D--LREYQ-------------------ALRMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D--~~E~~-------------------a~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      =  ..+++                   -.+|...-+.  +||+.+|+|+..+..++.+|++
T Consensus       341 l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~l~~~l~~  401 (426)
T PRK08170        341 LACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKR  401 (426)
T ss_pred             HHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHHHHHHHHh
Confidence            1  01111                   0234333333  5999999999999999988865

>PRK06059 lipid-transfer protein; Provisional

Probab=99.03  E-value=3.3e-09  Score=94.78  Aligned_cols=117  Identities=22%  Similarity=0.317  Sum_probs=84.0

Q ss_pred             CCceEEEEEEccchHHHhc--CCceeEEEEEEEecCCCCC--------CC------CCCCChHHHHHHHHHHHHHcCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKR--GTNIYAEILDGSLTCDAYH--------IT------APHPEGVGMVSCMEKALAKSGVAK   64 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~--g~~i~a~I~g~~~~~dg~~--------~~------~~~~~~~~~~~~~~~al~~Agi~~   64 (206)
                      ++||++++||.+++.|++.  +.+..++|++++...+...        ..      .+.++......+.+++|+++|+++
T Consensus       211 ~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~  290 (399)
T PRK06059        211 TSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGP  290 (399)
T ss_pred             CCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCH
Confidence            4799999999999999887  6667789999876543221        00      111122224578999999999999


Q ss_pred             cccccccccCCCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           65 EDVNYINAHAPSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        65 ~dI~~ve~hgtgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      +|||++|.|.+.+.. ....++.                       ++|...-+.  .||+.+++|+..++.++++|+.
T Consensus       291 ~Did~~El~d~f~~~-~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg  368 (399)
T PRK06059        291 EDLSLAEVYDLSTAL-ELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRG  368 (399)
T ss_pred             HHCcEEeecccChHH-HHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhcc
Confidence            999999999987653 1111111                       244433333  5999999999999999999975

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=98.98  E-value=2.2e-09  Score=95.61  Aligned_cols=117  Identities=19%  Similarity=0.190  Sum_probs=84.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCC-CChHHHHHHHHHHHHHcCCC--ccccccccccCCCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPH-PEGVGMVSCMEKALAKSGVA--KEDVNYINAHAPST   77 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~-~~~~~~~~~~~~al~~Agi~--~~dI~~ve~hgtgt   77 (206)
                      ++||++++||.+++.|++.+.++. +|+|++...+.......+ ........+.+++|++|||+  ++|||++|.|.+.+
T Consensus       210 ~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft  288 (385)
T PRK06066        210 FVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYS  288 (385)
T ss_pred             CCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCCh
Confidence            479999999999999998776664 899988765532211111 12333457999999999998  69999999998877


Q ss_pred             CcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789           78 RLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        78 ~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      ... .+.++.                       +||...-+.  .||+.+|+|+..++.++.+|+..
T Consensus       289 ~~~-l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~  354 (385)
T PRK06066        289 YKE-LQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGE  354 (385)
T ss_pred             HHH-HHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHccc
Confidence            532 222222                       344333333  49999999999999999999763

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=98.97  E-value=3.2e-09  Score=94.98  Aligned_cols=118  Identities=17%  Similarity=0.149  Sum_probs=85.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCC---CCCCCC-hHHHHHHHHHHHHHcCCC--ccccccccccC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHI---TAPHPE-GVGMVSCMEKALAKSGVA--KEDVNYINAHA   74 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~---~~~~~~-~~~~~~~~~~al~~Agi~--~~dI~~ve~hg   74 (206)
                      ++||++++||.+++.|++.+.+..++|+|++...+....   ...++. ......+.+++|++|||+  ++|||++|.|.
T Consensus       216 ~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D  295 (398)
T PRK06157        216 VSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHD  295 (398)
T ss_pred             CCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEec
Confidence            479999999999999998876567899999876543211   011221 223457899999999998  79999999999


Q ss_pred             CCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789           75 PSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        75 tgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      +.+.. ...-++.                       +++...-+.  .||+.+|+|+..++.++.+|+..
T Consensus       296 ~Fs~~-~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~  364 (398)
T PRK06157        296 CFSIT-ELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGR  364 (398)
T ss_pred             CChHH-HHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccc
Confidence            87753 1111111                       345444443  59999999999999999999764

>PRK07937 lipid-transfer protein; Provisional

Probab=98.97  E-value=4.7e-09  Score=92.51  Aligned_cols=112  Identities=18%  Similarity=0.157  Sum_probs=81.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHH-cCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAK-SGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~-Agi~~~dI~~ve~hgtgt~~   79 (206)
                      ++||++++||.+++.|++.+.++ .+|.|++...+.......+.   ....++++++++ ||++|+|||++|.|.+.+. 
T Consensus       204 ~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~~~~~~d~---~~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~-  278 (352)
T PRK07937        204 ITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESPSLGARDL---TRSPSTALAAEAATGGDAGGVDVAELHAPFTH-  278 (352)
T ss_pred             CCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCcccccccc---ccHHHHHHHHHHhcCCCHHHCCEEEEeCCChH-
Confidence            47999999999999999888776 99999988765433211111   112344556666 5999999999999998875 


Q ss_pred             CCHhhhhc------cee---ccccccccccccccchHHHHHHHHHhhhc
Q 045789           80 GDLREYQA------LRM---NSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        80 ~D~~E~~a------~~v---~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      ......++      +++   |..++  ||+.+++|+..++.++.+|+.+
T Consensus       279 ~~l~~~e~lGl~g~~pvN~~GG~l~--ghp~gatG~~~~~e~~~QL~g~  325 (352)
T PRK07937        279 QELILREALGLGDKTKVNPSGGALA--ANPMFAAGLERIGEAARHIWDG  325 (352)
T ss_pred             HHHHHHHHcCCCCCCCcCCCccchh--cCchhHHHHHHHHHHHHHHhcc
Confidence            22333333      343   34443  9999999999999999999775

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=98.96  E-value=1.8e-09  Score=97.53  Aligned_cols=114  Identities=20%  Similarity=0.235  Sum_probs=83.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||.+++.|++.+.++.++|++++.........  .  ......+++++|++||++++|||++|.|.+.+...
T Consensus       269 ~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~--~--~~~~~~a~~~al~~Agl~~~Did~~Ei~daFa~~~  344 (430)
T TIGR02446       269 LTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQD--M--LMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQT  344 (430)
T ss_pred             CCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHh--h--cccHHHHHHHHHHHcCCCHHHCCEEEeccccHHHH
Confidence            4799999999999999998888889999987653211100  1  12225789999999999999999999999877531


Q ss_pred             CH-hhhh-----------------cc---eeccccc--cccccccccchHHHHHHHHHhhh
Q 045789           81 DL-REYQ-----------------AL---RMNSTKS--LIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~-~E~~-----------------a~---~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      =. .|..                 .+   +|...-+  ..||+.+|+|+..++.++.+|+.
T Consensus       345 l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v~e~~~qL~g  405 (430)
T TIGR02446       345 LANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKR  405 (430)
T ss_pred             HHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHHHhh
Confidence            10 0110                 02   3333333  25999999999999999999975

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=98.90  E-value=5.4e-09  Score=94.33  Aligned_cols=115  Identities=21%  Similarity=0.273  Sum_probs=82.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEE-EEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEI-LDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~   79 (206)
                      ++||++++||.+++.|++.+.++.++| .+.....+....  ..........+.+++|+++|++++|||++|.|...+..
T Consensus       264 ~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~--~~~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~  341 (427)
T PRK09268        264 LTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHG--KEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQ  341 (427)
T ss_pred             CCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccc--cchhhccHHHHHHHHHHHcCCCHHHCCEEEeccccHHH
Confidence            579999999999999999888887777 555555553110  00012244579999999999999999999999988754


Q ss_pred             CCHhhh---h-------------------cceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           80 GDLREY---Q-------------------ALRMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        80 ~D~~E~---~-------------------a~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      . ..|+   +                   .++|...-+.  +||+.+|+|+..++.++.+|+.
T Consensus       342 ~-l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e~~~QL~~  403 (427)
T PRK09268        342 V-LATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE  403 (427)
T ss_pred             H-HHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHHHHHHHHh
Confidence            1 1111   1                   1344333333  4999999999999999999964

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=98.90  E-value=3.5e-09  Score=94.57  Aligned_cols=117  Identities=26%  Similarity=0.321  Sum_probs=77.7

Q ss_pred             CCceEEEEEEccchHHHhcCC-ceeEEEEEEEecCCCCC-CCCCC----CChHHHHHHHHHHHHHcCCCccccccccccC
Q 045789            1 MGEGAGVLLLEELEHAKKRGT-NIYAEILDGSLTCDAYH-ITAPH----PEGVGMVSCMEKALAKSGVAKEDVNYINAHA   74 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~-~~~~~----~~~~~~~~~~~~al~~Agi~~~dI~~ve~hg   74 (206)
                      ++||++++||.+++.|++.+. .-..+|.+.+...+... ...+.    ........+++++|+++||+++|||++|.|.
T Consensus       217 ~~DGAAA~vl~S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d  296 (393)
T cd00826         217 LNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHD  296 (393)
T ss_pred             cCCCeEEEEEecHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhh
Confidence            479999999999999988763 11234444433222111 11111    1234457899999999999999999999998


Q ss_pred             CCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789           75 PSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        75 tgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ..+.. ....++.                       ++|...-+.  .||+.+|+|+..++.++.+|+.
T Consensus       297 ~Fa~~-~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g  364 (393)
T cd00826         297 AFAAN-ACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKG  364 (393)
T ss_pred             hhHHH-HHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhh
Confidence            76542 1111111                       234333332  5999999999999999999964

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=98.85  E-value=1.6e-08  Score=90.38  Aligned_cols=117  Identities=12%  Similarity=0.177  Sum_probs=83.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHHHcCCCc--cccccccccCCCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAP-HPEGVGMVSCMEKALAKSGVAK--EDVNYINAHAPST   77 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~-~~~~~~~~~~~~~al~~Agi~~--~dI~~ve~hgtgt   77 (206)
                      ++||++++||.+++.|++.+.++ .+|+|++...+....... .........+.+++|+++|+++  +|||++|.|.+.+
T Consensus       216 ~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs  294 (392)
T PRK06065        216 VSDGAAAIVLASEDLARRYTDTP-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFD  294 (392)
T ss_pred             CCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCCh
Confidence            47999999999999999877655 458998876554321111 1223445689999999999985  9999999999987


Q ss_pred             CcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789           78 RLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        78 ~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      .. ....+++                       +++...-+.  .||+.+++|+..++.++.+|+..
T Consensus       295 ~~-~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~  360 (392)
T PRK06065        295 YK-ELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGT  360 (392)
T ss_pred             HH-HHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhcc
Confidence            32 1111111                       344333332  59999999999999999999753

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=98.82  E-value=2e-08  Score=90.72  Aligned_cols=117  Identities=21%  Similarity=0.262  Sum_probs=81.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCC-----------------------CCCChHHHHHHHHHHH
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITA-----------------------PHPEGVGMVSCMEKAL   57 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-----------------------~~~~~~~~~~~~~~al   57 (206)
                      ++||++++||.+++.|++.+.++ ..|++++...++.....                       ..........+++++|
T Consensus       225 ~sDGAaAvvl~See~A~~l~~~p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~  303 (430)
T PRK06365        225 MSDGAACAILASEDKAFEITDKP-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAY  303 (430)
T ss_pred             cCCceEEEEEecHHHHHhcCCCC-eEEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            47999999999999998877554 34566655444321100                       0112234568999999


Q ss_pred             HHcCCC--ccccccccccCCCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHH
Q 045789           58 AKSGVA--KEDVNYINAHAPSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAV  110 (206)
Q Consensus        58 ~~Agi~--~~dI~~ve~hgtgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~  110 (206)
                      +++||+  ++|||++|.|.+.+... ...+++                       ++|...-+.  .||+.+|+|+..++
T Consensus       304 ~~AGl~~~~~DiD~~Ei~D~Fa~~~-l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~  382 (430)
T PRK06365        304 EMAGITDPLNDLDLIELHDAYTSSE-IQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAV  382 (430)
T ss_pred             HHcCCCCCHHHCCEEEeecCCcHHH-HHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHH
Confidence            999997  79999999998876421 111111                       244333333  59999999999999


Q ss_pred             HHHHHhhhc
Q 045789          111 ATIKAIQTG  119 (206)
Q Consensus       111 ~~~l~l~~~  119 (206)
                      .++.+|+..
T Consensus       383 e~~~QLrG~  391 (430)
T PRK06365        383 FMFWQLQGR  391 (430)
T ss_pred             HHHHHHhcc
Confidence            999999864

>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]

Probab=98.80  E-value=4.7e-09  Score=89.63  Aligned_cols=107  Identities=24%  Similarity=0.379  Sum_probs=83.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||+++++|++++.|.+.|.+++++.+.+...-     ..|...+.+..-+|..+|+.+|+..+|||++|.+       
T Consensus       279 vSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vG-----v~P~iMGiGPavAIp~alk~aGL~v~did~FEIN-------  346 (435)
T KOG1389|consen  279 VSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVG-----VPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEIN-------  346 (435)
T ss_pred             cccchhhhhhhhhhhHhhcCCceeEEeeeeeeec-----CCHHHcCCCchhhhHHHHHHcCCcccccceeehh-------
Confidence            5899999999999999999999999999987641     2233334555788999999999999999999965       


Q ss_pred             CHhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789           81 DLREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        81 D~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      ++.-..+             +.+..-.--+||+.+|+|...++..+.-|++.
T Consensus       347 EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrr  398 (435)
T KOG1389|consen  347 EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR  398 (435)
T ss_pred             HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhh
Confidence            2222222             33434444589999999999999998888764

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=98.78  E-value=7.1e-08  Score=88.67  Aligned_cols=116  Identities=13%  Similarity=0.189  Sum_probs=84.4

Q ss_pred             CceEEEEEEccchHHHhcCC--ceeEEEEEEEecCCCCCCC-CCC-CChHHHHHHHHHHHHHcCCCccccccccccCCCC
Q 045789            2 GEGAGVLLLEELEHAKKRGT--NIYAEILDGSLTCDAYHIT-APH-PEGVGMVSCMEKALAKSGVAKEDVNYINAHAPST   77 (206)
Q Consensus         2 gEGa~alvL~~~~~A~~~g~--~i~a~I~g~~~~~dg~~~~-~~~-~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt   77 (206)
                      .||++++||.+++.|++.+.  .-...|.|++..+|..... ..+ ........+.+++|++|||+++|||++|.|.+.+
T Consensus       243 ~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~  322 (498)
T PRK08257        243 VDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFP  322 (498)
T ss_pred             cccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCH
Confidence            69999999999999998772  2246689988876653211 111 1234556799999999999999999999999987


Q ss_pred             CcCCHhhhhc--------ceec--cccccccccccccchHHHHHHHHHhhh
Q 045789           78 RLGDLREYQA--------LRMN--STKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        78 ~~~D~~E~~a--------~~v~--s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      ... .+.+++        +++.  .--...||+.++.|+.+++.++.+|+.
T Consensus       323 ~~~-~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg  372 (498)
T PRK08257        323 SAV-QVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRA  372 (498)
T ss_pred             HHH-HHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhh
Confidence            532 222222        1332  222246999999999999999999985

>PRK07855 lipid-transfer protein; Provisional

Probab=98.74  E-value=5.2e-08  Score=86.86  Aligned_cols=113  Identities=15%  Similarity=0.110  Sum_probs=81.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCC-----CCCC-ChHHHHHHHHHHHHHcCCCccccccccccC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHIT-----APHP-EGVGMVSCMEKALAKSGVAKEDVNYINAHA   74 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-----~~~~-~~~~~~~~~~~al~~Agi~~~dI~~ve~hg   74 (206)
                      ++||++++||.+++.|++.++++ .+|+|++...+.....     ..+. .......+++++|+++||+++|||++|.|.
T Consensus       215 ~sDGAaAvvl~see~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D  293 (386)
T PRK07855        215 ESDGAVALVVTSAERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYD  293 (386)
T ss_pred             cCCceEEEEEecHHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEecc
Confidence            47999999999999998877665 5899998765432111     0111 123456899999999999999999999999


Q ss_pred             CCCCcCCHhhhhc-----------------------cee---ccccccccccccccchHHHHHHHHHhhhc
Q 045789           75 PSTRLGDLREYQA-----------------------LRM---NSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        75 tgt~~~D~~E~~a-----------------------~~v---~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      +.+.. ..+.+++                       +|+   |..++ .||+.   |+..++.++++|+..
T Consensus       294 ~Ft~~-~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~-~gh~~---G~~~i~E~~~QLrG~  359 (386)
T PRK07855        294 HFTPF-VLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLG-EAYIH---GMNGIAEAVRQLRGT  359 (386)
T ss_pred             CCcHH-HHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccc-cCchh---hHHHHHHHHHHHhCC
Confidence            98752 1111111                       566   44444 47865   999999999999864

>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=98.69  E-value=3.7e-08  Score=74.30  Aligned_cols=92  Identities=25%  Similarity=0.304  Sum_probs=58.8

Q ss_pred             ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-------ceecccc
Q 045789           22 NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-------LRMNSTK   94 (206)
Q Consensus        22 ~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-------~~v~s~k   94 (206)
                      +++++|.+++.....     +...+.+...+++++|+++|++++|||++|.|...+...=. -...       +++..--
T Consensus         2 ~pla~i~~~~~~~~~-----P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~-~~~~lg~~~~~vN~~GG~   75 (123)
T PF02803_consen    2 KPLARIVGYASAGVD-----PEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLA-FLEALGLDPEKVNPNGGA   75 (123)
T ss_dssp             -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHH-HHHHHTTGGGGBSTT--H
T ss_pred             CeEEEEEEEEEEecC-----HHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHH-hhccccccccccCccccc
Confidence            578999998765321     22223455789999999999999999999999776642111 1111       2222222


Q ss_pred             ccccccccccchHHHHHHHHHhhhc
Q 045789           95 SLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        95 ~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      -.+||+.+|+|+..++.++..|+..
T Consensus        76 la~GHP~gasG~r~~~~l~~~L~~~  100 (123)
T PF02803_consen   76 LALGHPLGASGARLVVELAHQLRRR  100 (123)
T ss_dssp             HHH-BHTTTHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhhhhHHHHHHh
Confidence            2369999999999999999999763

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....

>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=98.58  E-value=7e-08  Score=80.77  Aligned_cols=113  Identities=26%  Similarity=0.408  Sum_probs=88.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEe-cCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSL-TCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~-~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~   79 (206)
                      +.||++++++.+++..++.+.+++++|.++.+ .+|      |.-.+.+..-+|+.+|+.+|+...|||.||.+....+.
T Consensus       252 i~DGA~AvivAsEdavK~~NlkPLARiVays~vGcd------P~IMGIGPvPAI~~vLKksGlkl~DiDl~EvNEAFApQ  325 (396)
T KOG1391|consen  252 IADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCD------PSIMGIGPVPAISGVLKKSGLKLKDIDLVEVNEAFAPQ  325 (396)
T ss_pred             ccCCceeEEEechhHHhhcCCchhhhhheeeeeccC------hhhccccCcHHHHHHHHHcCCcccccceEEechhhchH
Confidence            47999999999999999999999999999865 444      23334445678999999999999999999998777776


Q ss_pred             CCHhhhhc------ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789           80 GDLREYQA------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        80 ~D~~E~~a------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      .-..|..-      +.+..-.-.+||+.++||..--...+.-|+++
T Consensus       326 ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr  371 (396)
T KOG1391|consen  326 YLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRR  371 (396)
T ss_pred             HHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHc
Confidence            65555544      45555555689999999987777777666553

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.12  E-value=2e-06  Score=76.07  Aligned_cols=63  Identities=13%  Similarity=0.096  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc--cee-----ccccccccccccccchHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA--LRM-----NSTKSLIGHLLGASGAAEAVA  111 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a--~~v-----~s~k~~~Gh~~~asG~~~l~~  111 (206)
                      ..++|+++|+++|++++||+||..|.+++...|.+....  +.+     -..-..+||+.+|+-.+.|-.
T Consensus       273 ~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~  342 (372)
T PRK07515        273 VAEHIVEHLAENGLTPADVKRFWLHQANINMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK  342 (372)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence            567999999999999999999999999999999775432  111     112346799988876555443

>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]

Probab=97.95  E-value=3.1e-06  Score=71.28  Aligned_cols=116  Identities=25%  Similarity=0.300  Sum_probs=83.5

Q ss_pred             CceEEEEEEccchHHHhcCCceeE-EEEEEEecCCCCCCCCCC-----CChHHHHHHHHHHHHHcCCCccccccccccCC
Q 045789            2 GEGAGVLLLEELEHAKKRGTNIYA-EILDGSLTCDAYHITAPH-----PEGVGMVSCMEKALAKSGVAKEDVNYINAHAP   75 (206)
Q Consensus         2 gEGa~alvL~~~~~A~~~g~~i~a-~I~g~~~~~dg~~~~~~~-----~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgt   75 (206)
                      +||+++-+|.++....+.|..--+ +|.|.-+..|-.+.....     ...+-...+.++.+++.|++|.||+.||.|.+
T Consensus       221 sdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdc  300 (408)
T KOG1406|consen  221 SDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDC  300 (408)
T ss_pred             CCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecc
Confidence            799999999998888887755544 477776666643211111     11234466889999999999999999999999


Q ss_pred             CCCcCCHhhhhc---ce--------------------eccccc--cccccccccchHHHHHHHHHhhh
Q 045789           76 STRLGDLREYQA---LR--------------------MNSTKS--LIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        76 gt~~~D~~E~~a---~~--------------------v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      .++ ++.+-++|   |+                    |.-..+  .-||+.+|.|+++-...+.+|+-
T Consensus       301 fs~-nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg  367 (408)
T KOG1406|consen  301 FSA-NELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRG  367 (408)
T ss_pred             cch-hhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhh
Confidence            885 66665666   21                    222222  24999999999999999999964

>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=97.75  E-value=3.8e-05  Score=65.54  Aligned_cols=139  Identities=19%  Similarity=0.229  Sum_probs=91.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEE-ecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCC-
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGS-LTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR-   78 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~-~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~-   78 (206)
                      +-||+.+.+++.++.|++.|-++.+.++.+- +++|-.......|     .-.+.+.|++||++..|||.+|.|....- 
T Consensus       302 ltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgp-----ay~ipkll~kagltlkdid~feiheafagq  376 (465)
T KOG1392|consen  302 LTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGP-----AYVIPKLLDKAGLTLKDIDVFEIHEAFAGQ  376 (465)
T ss_pred             hcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheeccc-----ccccHHHHHHcCCcccccchhhhHHHHhHH
Confidence            3589999999999999999999999999984 5666543323333     45688999999999999999999965322 


Q ss_pred             -cCCHhhhhc----------------cee-----ccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCC
Q 045789           79 -LGDLREYQA----------------LRM-----NSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLS  136 (206)
Q Consensus        79 -~~D~~E~~a----------------~~v-----~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~  136 (206)
                       +.....+..                .++     =...-.+||+++|.|..-.+.+.-.|++                  
T Consensus       377 ilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~anrl~~------------------  438 (465)
T KOG1392|consen  377 ILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSANRLKE------------------  438 (465)
T ss_pred             HHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHhHHHh------------------
Confidence             111100000                111     1112248999999998766655544332                  


Q ss_pred             CCCCcccccccccccCCCCeEEEEEeecccceeEEEccccC
Q 045789          137 RTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                                     ...++..+..-..||...+++++.+|
T Consensus       439 ---------------e~gqygvvaacaaggqgvamlieayp  464 (465)
T KOG1392|consen  439 ---------------EKGQYGVVAACAAGGQGVAMLIEAYP  464 (465)
T ss_pred             ---------------hcCceeEeehhhcCCcceEEEeeccC
Confidence                           11222333333478888889888875

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=97.23  E-value=0.00025  Score=61.45  Aligned_cols=64  Identities=17%  Similarity=0.209  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ..++++++|+++|++++||+++-.|..+...-+.+.-.- ++   +......+||+.+++=.+.|...
T Consensus       232 ~~~~i~~~L~~~gl~~~did~~~~H~~~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~  299 (329)
T PRK07204        232 LMKFIDKLLMDAGYTLADIDLIVPHQASGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEA  299 (329)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHH
Confidence            457899999999999999999999998887655443222 22   23455678999877665555543

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=97.16  E-value=0.0006  Score=58.72  Aligned_cols=65  Identities=20%  Similarity=0.238  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      ..++++++|+++|++++||+++..|..+.+.-+.+.... ++   +...-..+||+.+|+-.+.|..++
T Consensus       221 ~~~~~~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~  289 (318)
T TIGR00747       221 MGDVVEETLEANGLDPEDIDWFVPHQANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELL  289 (318)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999988877666554332 22   111223489999988777776654

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=97.13  E-value=0.00031  Score=60.52  Aligned_cols=65  Identities=20%  Similarity=0.268  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      ..++++++|+++|++++||+++..|..+...-+..+... ++   +...-..+||+.+++-++.|..++
T Consensus       221 ~~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~~  289 (319)
T PRK09352        221 LAKVAREALEAAGLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAV  289 (319)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999977665555443332 22   122234689999888777776554

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=97.02  E-value=0.00035  Score=59.97  Aligned_cols=65  Identities=22%  Similarity=0.276  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      ..++++++|+++|++++||+++..|..+...-+.+.... ++   +...-..+||+.+++-.+.|..++
T Consensus       225 ~~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~  293 (320)
T cd00830         225 MPESIEEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAI  293 (320)
T ss_pred             hHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHH
Confidence            457899999999999999999999988877666554332 21   112334689999998888777664

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=96.96  E-value=5.9e-05  Score=67.53  Aligned_cols=109  Identities=23%  Similarity=0.240  Sum_probs=62.5

Q ss_pred             ceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCCh-HHHHHHHHHHHHHcCCC-ccccccccccCCCCCcC
Q 045789            3 EGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEG-VGMVSCMEKALAKSGVA-KEDVNYINAHAPSTRLG   80 (206)
Q Consensus         3 EGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~-~~~~~~~~~al~~Agi~-~~dI~~ve~hgtgt~~~   80 (206)
                      +|++++++.+++.+.+.+.++.+.++++.+..-       .|.. ......+.++|+.+++. .+||+++|.+..+..+.
T Consensus       248 dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv-------~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~nEafa~~~  320 (392)
T COG0183         248 DGAAALLLMSESKAKELGLAPLAAIRAYAMAGV-------DPSIMDGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVA  320 (392)
T ss_pred             cHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCC-------CcccccCCHHHHHHHHHHcCCchhhhcCceecChHHHHHH
Confidence            455555555555555566666665555544321       1100 12255677777777777 77777777553222211


Q ss_pred             CHhhhhc----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      +.....-    +++..---.+||+.+|+|+..+..++.+|+.
T Consensus       321 ~~~~~~~G~~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~  362 (392)
T COG0183         321 LGVTKILGDLPVNPSGGAIALGHPIGATGARILVELARQLRG  362 (392)
T ss_pred             HhhHHhcCCceeCCCcchhhcCCCccchHHHHHHHHHHHHhh
Confidence            1110000    2232223347999999999999999999987

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=96.92  E-value=0.0018  Score=56.31  Aligned_cols=106  Identities=20%  Similarity=0.172  Sum_probs=65.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCC--C-----CCCCh--------HHHHHHHHHHHHHcCCCcc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHIT--A-----PHPEG--------VGMVSCMEKALAKSGVAKE   65 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~--~-----~~~~~--------~~~~~~~~~al~~Agi~~~   65 (206)
                      +|||++|+||++.... ..+.    .+.+.....++....  .     ...++        ....++++++|+++|++++
T Consensus       183 ~GDGA~A~ll~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~  257 (338)
T PRK09258        183 LGSGAAAAVLTRGSLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVE  257 (338)
T ss_pred             ecccceEEEEecCCCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence            4899999999975421 1122    234433332222110  0     01121        2334588899999999999


Q ss_pred             ccccccccCCCCCcCCHhhhhc-cee----ccccccccccccccchHHHHHH
Q 045789           66 DVNYINAHAPSTRLGDLREYQA-LRM----NSTKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        66 dI~~ve~hgtgt~~~D~~E~~a-~~v----~s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ||+++-.|-.+.+..+.++-.. ++.    ... ..+||+.+++=.+.|..+
T Consensus       258 did~~i~H~~~~~~~~~~~~~lgl~~~k~~~~~-~~~GN~~sas~~~~L~~~  308 (338)
T PRK09258        258 QVDRVICHQVGAAHTRAILKALGIDPEKVFTTF-PTLGNMGPASLPITLAMA  308 (338)
T ss_pred             HCCEEecCCCCHHHHHHHHHHhCCCHHHceehH-hhhCCcHHhHHHHHHHHH
Confidence            9999999988887777664433 221    122 368999998766666554

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=96.76  E-value=0.0017  Score=55.98  Aligned_cols=64  Identities=16%  Similarity=0.194  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ..++++++|+++|++++||+++-.|-.+...-+.+.-.. ++   +-.....+||+.+++-.+.|..+
T Consensus       227 ~~~~i~~~L~~~g~~~~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~  294 (325)
T PRK12879        227 MPKGARQVLEKAGLTKDDIDWVIPHQANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA  294 (325)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH
Confidence            346889999999999999999999977665544432222 21   11134678999988877777544

>PRK06840 hypothetical protein; Validated

Probab=95.70  E-value=0.014  Score=50.82  Aligned_cols=64  Identities=17%  Similarity=0.106  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec--cccccccccccccchHHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN--STKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~--s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ..++++++|+++|++++||+++-.|-.+...-+.+...- ++..  .....+||+.+++-.+.|-..
T Consensus       239 ~~~~i~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~  305 (339)
T PRK06840        239 FLKVIREALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA  305 (339)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCcCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH
Confidence            457899999999999999999877655544444332221 1100  123578999988776666544

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=95.53  E-value=0.041  Score=48.92  Aligned_cols=63  Identities=13%  Similarity=0.078  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhh------cce---eccccccccccccccchHHHHHH
Q 045789           50 VSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQ------ALR---MNSTKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        50 ~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~------a~~---v~s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ...++++|+++|++++||+++-.|-......+.+--.      .++   +-..-..+||+.+||-.+.|..+
T Consensus       275 ~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a  346 (378)
T PRK06816        275 IKPLLELVDKRNLDPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDEL  346 (378)
T ss_pred             HHHHHHHHHHcCCChhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHH
Confidence            5678889999999999999999997766555544221      111   11222468999999877777655

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=95.49  E-value=0.013  Score=52.04  Aligned_cols=61  Identities=20%  Similarity=0.278  Sum_probs=44.7

Q ss_pred             HHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce----eccccccccccccccchHHHHHH
Q 045789           51 SCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR----MNSTKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        51 ~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~----v~s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ++++++|+++|++++||+++-.|-.+...-|.+.... ++    ...+ ..+||+.+|+=.+.|-.+
T Consensus       284 ~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~l-~~~GNt~sAsi~~~L~~~  349 (379)
T PLN02326        284 QVIESALQKAGLTAESIDWLLLHQANQRIIDAVAQRLGIPPEKVISNL-ANYGNTSAASIPLALDEA  349 (379)
T ss_pred             HHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeecH-hhcCcHHHHHHHHHHHHH
Confidence            5788999999999999999999987776666553332 21    1233 578999988777766555

>PRK04262 hypothetical protein; Provisional

Probab=95.41  E-value=0.029  Score=49.16  Aligned_cols=66  Identities=17%  Similarity=0.184  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce-----eccccccccccccccchHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR-----MNSTKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~-----v~s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ....++++++|+++|++++||+++-.|-.+....+.+.-.- ++     .+-.-..+||+.+|+=.+.|..+
T Consensus       209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~  280 (347)
T PRK04262        209 KHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAV  280 (347)
T ss_pred             HHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHH
Confidence            34567889999999999999999999966555555443222 22     11123578999999877777654

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=95.12  E-value=0.021  Score=49.90  Aligned_cols=66  Identities=20%  Similarity=0.244  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ..+.++++++|++++++++|||++..|=......|.+--.. ++   +-..-..+|++.+||=.+.|.++
T Consensus       223 ~~~~~~~~~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~  292 (323)
T COG0332         223 RAMPKAIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEA  292 (323)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHH
Confidence            45678999999999999999999999954444333221111 21   11222346788777666555544

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=95.06  E-value=0.025  Score=49.06  Aligned_cols=63  Identities=14%  Similarity=0.145  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHH
Q 045789           50 VSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        50 ~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      -++++++|+++|++++||+++-.|-.+...-+.+.... ++   +-..-..+||+.+|+=.+.|-.+
T Consensus       229 ~~~i~~~L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~  295 (326)
T CHL00203        229 PAVIIKCLNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA  295 (326)
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH
Confidence            34789999999999999999999987766655543222 22   11222478999888766666544

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=94.15  E-value=0.17  Score=44.49  Aligned_cols=63  Identities=16%  Similarity=0.245  Sum_probs=42.0

Q ss_pred             HHHHHHHHHcCCCccccccccccCCCCCcCCHh-hhhcce----ecc-ccccccccccccchHHHHHHH
Q 045789           51 SCMEKALAKSGVAKEDVNYINAHAPSTRLGDLR-EYQALR----MNS-TKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        51 ~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~-E~~a~~----v~s-~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      ++++++|+++|++++||+++-.|-.....-+.+ +..-++    +.+ .-..+||+.+||=.+.|...+
T Consensus       212 ~~~~~~L~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~  280 (345)
T TIGR00748       212 TAAKGLMEKLGLTPEDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVL  280 (345)
T ss_pred             HHHHHHHHHcCCCHHHcCEEEeCCCChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHH
Confidence            678899999999999999999995544333322 221111    111 125789999998777776553

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=93.90  E-value=0.049  Score=46.73  Aligned_cols=65  Identities=18%  Similarity=0.291  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCC-CcCCHhhhhc-c---eecc----ccccccccccccchHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPST-RLGDLREYQA-L---RMNS----TKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt-~~~D~~E~~a-~---~v~s----~k~~~Gh~~~asG~~~l~~~  112 (206)
                      .....+++++|++.+++ +||+++..|-.+. ..-+..+... +   .+..    .-..+||+.+++-.+.|-.+
T Consensus       223 ~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~  296 (324)
T cd00827         223 KLIAKVVRKALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASL  296 (324)
T ss_pred             HHHHHHHHHHHHHcccc-cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence            44567888999999999 9999999997776 5555444332 2   1222    34568999888776666655

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=92.96  E-value=0.14  Score=44.22  Aligned_cols=61  Identities=18%  Similarity=0.174  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec---cccccccccccccchHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN---STKSLIGHLLGASGAAEA  109 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~---s~k~~~Gh~~~asG~~~l  109 (206)
                      +.++++++|+++|++++||+++-.|-.+...-+.+.... ++-.   ..-..+||+.+|+=.+.|
T Consensus       229 ~~~~~~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L  293 (326)
T PRK05963        229 MSGASQNVLASAAMTPQDIDRFFPHQANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSL  293 (326)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHH
Confidence            446788999999999999999999966655444332111 2211   112567898666555444

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=92.39  E-value=0.04  Score=38.55  Aligned_cols=84  Identities=15%  Similarity=0.156  Sum_probs=48.6

Q ss_pred             HHHcCCCccccccccccCCCCCcCCHhhhhc-cee----ccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCC
Q 045789           57 LAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRM----NSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPD  131 (206)
Q Consensus        57 l~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v----~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~  131 (206)
                      |+++|++++||+++-.|-.....-+.+.... ++-    ... ..+||+.+++-.+.|..+   ++.+.+          
T Consensus         1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~~-~~~Gn~~sa~~~~~L~~~---~~~g~~----------   66 (90)
T PF08541_consen    1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDNL-AEYGNTGSASIPINLADA---LEEGRI----------   66 (90)
T ss_dssp             HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-TH-HHH-B-GGGHHHHHHHHH---HHTTSS----------
T ss_pred             CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHHH-hccCcchhhhHHHHHHHH---HHcCCC----------
Confidence            6889999999999999976665444422211 221    222 567999988777766554   343322          


Q ss_pred             CCCCCCCCCcccccccccccCCCCeEEEEEeecccceeEEEcc
Q 045789          132 KHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMA  174 (206)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~  174 (206)
                                          ++..+.+..+.+.|.+-+++++|
T Consensus        67 --------------------~~Gd~vl~~~~G~G~~~~~~~~~   89 (90)
T PF08541_consen   67 --------------------KPGDRVLLVGFGAGFSWGAAVLR   89 (90)
T ss_dssp             --------------------CTTEEEEEEEEETTTEEEEEEEE
T ss_pred             --------------------CCCCEEEEEEEEhhheeEEEEEE
Confidence                                12244666677788888887775

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=92.37  E-value=0.066  Score=47.06  Aligned_cols=65  Identities=17%  Similarity=0.078  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHHHc--CCCccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHH
Q 045789           48 GMVSCMEKALAKS--GVAKEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        48 ~~~~~~~~al~~A--gi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ...++++++|+++  |++++||+++-.|-.+...-|.++..- ++-.      ..-..+||+.+++=.+.|-.+
T Consensus       260 ~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~  333 (361)
T cd00831         260 NLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYM  333 (361)
T ss_pred             HHHHHHHHHhccccCCCccccceEEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHH
Confidence            4566889999999  999999999999987777666554332 2211      223468999998777776655

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=90.37  E-value=0.86  Score=40.59  Aligned_cols=66  Identities=14%  Similarity=0.112  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHcCCCccccccccccCCCCCcCCHh-hhhc--ceec-------------cccccccccccccchHHHHH
Q 045789           48 GMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLR-EYQA--LRMN-------------STKSLIGHLLGASGAAEAVA  111 (206)
Q Consensus        48 ~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~-E~~a--~~v~-------------s~k~~~Gh~~~asG~~~l~~  111 (206)
                      ...+++++.|++.|++++||+++..|-..++..-.. +...  ..+.             -.-..+||+.++|=.+.|..
T Consensus       206 ~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~  285 (379)
T TIGR01835       206 AFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLAS  285 (379)
T ss_pred             HHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHH
Confidence            345788888999999999999999997544432111 1100  0000             12347899998887777765


Q ss_pred             HH
Q 045789          112 TI  113 (206)
Q Consensus       112 ~~  113 (206)
                      ++
T Consensus       286 ~l  287 (379)
T TIGR01835       286 LL  287 (379)
T ss_pred             HH
Confidence            53

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=88.94  E-value=2.4  Score=37.87  Aligned_cols=107  Identities=20%  Similarity=0.237  Sum_probs=64.1

Q ss_pred             CceEEEEEEccchHHHhcCCceeEEEEEEEe-cCCCCC----CCCCCC--C--------hHHHHHHHHHHHHHcCCCccc
Q 045789            2 GEGAGVLLLEELEHAKKRGTNIYAEILDGSL-TCDAYH----ITAPHP--E--------GVGMVSCMEKALAKSGVAKED   66 (206)
Q Consensus         2 gEGa~alvL~~~~~A~~~g~~i~a~I~g~~~-~~dg~~----~~~~~~--~--------~~~~~~~~~~al~~Agi~~~d   66 (206)
                      |.|++|+|+..-       ..+.+.+.+... ..|-..    ...+.|  +        ......+.+..+++.|++++|
T Consensus       156 GAGavA~lIg~n-------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~d  228 (377)
T COG3425         156 GAGAVAFLIGKN-------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDD  228 (377)
T ss_pred             CCceEEEEEccC-------CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhh
Confidence            789999999852       345555544432 333221    111112  1        234456677777889999999


Q ss_pred             cccccccCCCCCcCCHhhhh------cceeccccc-cccccccccchHHHHHHHHH
Q 045789           67 VNYINAHAPSTRLGDLREYQ------ALRMNSTKS-LIGHLLGASGAAEAVATIKA  115 (206)
Q Consensus        67 I~~ve~hgtgt~~~D~~E~~------a~~v~s~k~-~~Gh~~~asG~~~l~~~~l~  115 (206)
                      .+|+..|-.-++..-..-..      .+.-+-.-+ ++|++..+|..++|+.++-.
T Consensus       229 fdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~  284 (377)
T COG3425         229 FDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDN  284 (377)
T ss_pred             hCeEEecCCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhh
Confidence            99999998766532211110      011222223 68999999999999887643

>PLN03173 chalcone synthase; Provisional

Probab=87.88  E-value=0.41  Score=42.96  Aligned_cols=66  Identities=15%  Similarity=0.086  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ..+...+++.|++.|++.+||+++-.|=.|...-|.++..- ++-.      .+-..+|++.+++=+.-|-+.
T Consensus       277 ~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~  349 (391)
T PLN03173        277 KNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEM  349 (391)
T ss_pred             HHHHHHHHHHHHhcCCCccccCeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence            44566889999999999999999999988877777665543 2211      123457888877655555544

>PLN03170 chalcone synthase; Provisional

Probab=87.85  E-value=0.45  Score=42.83  Aligned_cols=66  Identities=17%  Similarity=0.117  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ..+.++++++|+++|++.+||+++-.|=-|...-|.++..- ++-.      .+-..+||+.+++=+..|-+.
T Consensus       281 ~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~  353 (401)
T PLN03170        281 KNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM  353 (401)
T ss_pred             HHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence            34556889999999999999999999977776666655433 2211      123467888888666655554

>PLN03169 chalcone synthase family protein; Provisional

Probab=86.96  E-value=0.76  Score=41.15  Aligned_cols=65  Identities=14%  Similarity=0.107  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHcCCCccccc--cccccCCCCCcCCHhhhhc-ceecc------ccccccccccccchHHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVN--YINAHAPSTRLGDLREYQA-LRMNS------TKSLIGHLLGASGAAEAVA  111 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~--~ve~hgtgt~~~D~~E~~a-~~v~s------~k~~~Gh~~~asG~~~l~~  111 (206)
                      ..+..+++++|+++|++++||+  ++-.|=.+...-|.++..- ++-..      +-..+||+.+++=.+.|-+
T Consensus       281 ~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~  354 (391)
T PLN03169        281 DNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEY  354 (391)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHH
Confidence            3445678999999999999898  8888866665555554332 22211      2246788888765555543

>PRK08256 lipid-transfer protein; Provisional

Probab=86.37  E-value=2.3  Score=37.91  Aligned_cols=95  Identities=13%  Similarity=0.003  Sum_probs=54.2

Q ss_pred             EEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCcccccccccc-CCCCCcCCHhhhhcceecccccccccccccc
Q 045789           26 EILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAH-APSTRLGDLREYQALRMNSTKSLIGHLLGAS  104 (206)
Q Consensus        26 ~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~~D~~E~~a~~v~s~k~~~Gh~~~as  104 (206)
                      .|.|++.+.-+... .......-..+++++||+++|++++|||.+... ..+...........+-+.......=...+++
T Consensus         4 ~IvG~~~t~~~~~~-~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~~~~~~~~lGl~~~~~~~v~~~caS   82 (391)
T PRK08256          4 FVAGVGMTPFEKPG-ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTSGQRALYEVGMTGIPIVNVNNNCST   82 (391)
T ss_pred             EEEeccccccccCC-CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcchhHHHHHHcCCCCCCCcccccccHH
Confidence            46777655443311 111123445678999999999999999976431 1111111111111122222222333456788


Q ss_pred             chHHHHHHHHHhhhccc
Q 045789          105 GAAEAVATIKAIQTGWI  121 (206)
Q Consensus       105 G~~~l~~~~l~l~~~~i  121 (206)
                      |+..+..+...++.|..
T Consensus        83 g~~ai~~A~~~I~sG~~   99 (391)
T PRK08256         83 GSTALFLARQAVRSGAA   99 (391)
T ss_pred             HHHHHHHHHHHHHCCCC
Confidence            89999999999998864

>PRK06158 thiolase; Provisional

Probab=86.35  E-value=2.9  Score=37.23  Aligned_cols=93  Identities=15%  Similarity=0.040  Sum_probs=52.3

Q ss_pred             EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceeccccccccccccc
Q 045789           25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNSTKSLIGHLLGA  103 (206)
Q Consensus        25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s~k~~~Gh~~~a  103 (206)
                      ..|.|++...-+....  .....-..+++++||+++||+++|||.+-+... ........+.- +-+.......-...++
T Consensus        10 vaIvG~g~t~~~~~~~--~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~~~la~~lGl~~~~~~~~~~g~~   86 (384)
T PRK06158         10 TAIVGAATAGLGEAPG--LSAMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWGLSVAEYLGIRPRFVDGTMIGGS   86 (384)
T ss_pred             EEEEEeeeccceeCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcHHHHHHHcCCCCeeeccccCccH
Confidence            4588888765544311  111345577999999999999999998765321 11111111110 1121111112234566


Q ss_pred             cchHHHHHHHHHhhhcc
Q 045789          104 SGAAEAVATIKAIQTGW  120 (206)
Q Consensus       104 sG~~~l~~~~l~l~~~~  120 (206)
                      +|+..+..+...++.|.
T Consensus        87 s~~~al~~A~~~I~sG~  103 (384)
T PRK06158         87 SFLAHLLPAALALEAGL  103 (384)
T ss_pred             HHHHHHHHHHHHHHcCC
Confidence            77777778888887764

>PRK05790 putative acyltransferase; Provisional

Probab=86.14  E-value=2.5  Score=37.74  Aligned_cols=95  Identities=16%  Similarity=0.066  Sum_probs=52.7

Q ss_pred             EEEEEEEecCCCCCCCC--CCCChHHHHHHHHHHHHHcCCCccccccccccCCCCC--c-CCHh-hhh-cceecc-cccc
Q 045789           25 AEILDGSLTCDAYHITA--PHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR--L-GDLR-EYQ-ALRMNS-TKSL   96 (206)
Q Consensus        25 a~I~g~~~~~dg~~~~~--~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~--~-~D~~-E~~-a~~v~s-~k~~   96 (206)
                      ..|.|++.+.-++....  ......-..+++++||+++||+++|||.+-. |+.++  . .... ... ...+.. ....
T Consensus         4 v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~-g~~~~~~~~~~~~~~~~~~~gl~~~~~~~   82 (393)
T PRK05790          4 VVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIM-GQVLQAGAGQNPARQAALKAGLPVEVPAL   82 (393)
T ss_pred             eEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEE-EEecCCCCCCcHHHHHHHHcCCCCCCcee
Confidence            34778776654442211  1112344577899999999999999998753 22111  1 1111 110 011110 1112


Q ss_pred             ccccccccchHHHHHHHHHhhhcc
Q 045789           97 IGHLLGASGAAEAVATIKAIQTGW  120 (206)
Q Consensus        97 ~Gh~~~asG~~~l~~~~l~l~~~~  120 (206)
                      .=+..+++|+..+..+...++.|.
T Consensus        83 ~v~~~Casg~~al~~A~~~I~sG~  106 (393)
T PRK05790         83 TINKVCGSGLKAVALAAQAIRAGD  106 (393)
T ss_pred             eecccchHHHHHHHHHHHHHHcCC
Confidence            223457788888888888888774

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=85.30  E-value=2.7  Score=38.12  Aligned_cols=94  Identities=14%  Similarity=-0.004  Sum_probs=56.1

Q ss_pred             EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC----Hhhhhc--ceecccccccc
Q 045789           25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD----LREYQA--LRMNSTKSLIG   98 (206)
Q Consensus        25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D----~~E~~a--~~v~s~k~~~G   98 (206)
                      ..|.|++.+.-+........ -.-..+++++||+++||+++|||.+-+. +.....+    .-+..+  +-+.......-
T Consensus        18 VaIvG~g~Tpfgr~~~~~~~-~eL~~eA~~~Al~dagl~~~dID~vv~~-~~~~~~~g~~~~~~~~~~~lGl~~~~~~~v   95 (430)
T PRK06365         18 VYMVAAGVTKFDKASPYMDF-RERVKKAFDYAMNDAGLTLADIDGSVAS-YFSDHFQRQLLAGIMVQDYLGLVPKPSKRI   95 (430)
T ss_pred             EEEEEeeecCccccCCCCCH-HHHHHHHHHHHHHHcCCCHHHcCEEEEe-cccccccccchhhHHHHHhcCCCCCceEEE
Confidence            45888887655542111111 2455778999999999999999986542 2111111    111111  22222222333


Q ss_pred             ccccccchHHHHHHHHHhhhcc
Q 045789           99 HLLGASGAAEAVATIKAIQTGW  120 (206)
Q Consensus        99 h~~~asG~~~l~~~~l~l~~~~  120 (206)
                      ...++||+..+..+...++.|.
T Consensus        96 ~~~~aSg~~ai~~A~~~I~sG~  117 (430)
T PRK06365         96 EGGGATGGLAFQAGYEEIASGR  117 (430)
T ss_pred             eCCcHHHHHHHHHHHHHHHcCC
Confidence            4568899999999999998874

>PLN03172 chalcone synthase family protein; Provisional

Probab=85.26  E-value=1.1  Score=40.22  Aligned_cols=65  Identities=17%  Similarity=0.100  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceecc------ccccccccccccchHHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNS------TKSLIGHLLGASGAAEAVA  111 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s------~k~~~Gh~~~asG~~~l~~  111 (206)
                      ..+...+++.|++.|++..||++|-.|=.|...-|.++..- ++-..      +-..+|++.+++=+.-|-+
T Consensus       277 ~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~  348 (393)
T PLN03172        277 KNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDE  348 (393)
T ss_pred             HHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHH
Confidence            44556788899999999999999999988877777776543 22111      2335688877754444443

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=84.94  E-value=2.7  Score=37.71  Aligned_cols=94  Identities=17%  Similarity=0.208  Sum_probs=54.5

Q ss_pred             EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC---Hhhhhcceecc-cccccc-c
Q 045789           25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD---LREYQALRMNS-TKSLIG-H   99 (206)
Q Consensus        25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D---~~E~~a~~v~s-~k~~~G-h   99 (206)
                      ..|.|++...-+....  .....-..++++++|+++||+++|||.+-+..+......   ..+..+-.++. .++.+- +
T Consensus        11 vaIvG~g~t~~~~~~~--~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~~~~V~   88 (392)
T PRK06065         11 VAVIGAGLTLFRRRLL--ETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKPVSRVY   88 (392)
T ss_pred             eEEEEecccCCcCCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCCeEEEe
Confidence            3488888765544311  111344477999999999999999998765322111111   11111111111 132221 2


Q ss_pred             cccccchHHHHHHHHHhhhcc
Q 045789          100 LLGASGAAEAVATIKAIQTGW  120 (206)
Q Consensus       100 ~~~asG~~~l~~~~l~l~~~~  120 (206)
                      ..+++|...+..+...++.|.
T Consensus        89 ~~gasG~~al~~A~~~I~sG~  109 (392)
T PRK06065         89 VGGATGVMTAIAGWYHVASGL  109 (392)
T ss_pred             cCchhHHHHHHHHHHHHhCCC
Confidence            347888888888999898884

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=84.11  E-value=5  Score=35.05  Aligned_cols=69  Identities=22%  Similarity=0.175  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHHcCCCccccccc---cccCCCCCcCCHhhhhcceeccccc--cccccccccchHHHHHHHHHhh
Q 045789           49 MVSCMEKALAKSGVAKEDVNYI---NAHAPSTRLGDLREYQALRMNSTKS--LIGHLLGASGAAEAVATIKAIQ  117 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~v---e~hgtgt~~~D~~E~~a~~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~  117 (206)
                      ..++.++||+.+++.|+||+.|   .+.|..++.-|.-=+..+.+.....  -++-..+++|+.+|..+.--++
T Consensus        80 ~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r  153 (356)
T COG3424          80 GVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR  153 (356)
T ss_pred             HHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence            3578899999999999999964   4567777777765555444322221  2344555666666665544333

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=84.05  E-value=2.3  Score=37.96  Aligned_cols=96  Identities=11%  Similarity=0.015  Sum_probs=54.3

Q ss_pred             EEEEEEEecCCCCCCC-CC-CCChHHHHHHHHHHHHHcCCCccccccccc-cC--CCCCcCCHhhh---hcceecccccc
Q 045789           25 AEILDGSLTCDAYHIT-AP-HPEGVGMVSCMEKALAKSGVAKEDVNYINA-HA--PSTRLGDLREY---QALRMNSTKSL   96 (206)
Q Consensus        25 a~I~g~~~~~dg~~~~-~~-~~~~~~~~~~~~~al~~Agi~~~dI~~ve~-hg--tgt~~~D~~E~---~a~~v~s~k~~   96 (206)
                      ..|.|.+.+--+.... .. .....-..++++++|+++||+++|||.+-. +.  .+...+-.-+.   ..++.+.....
T Consensus         4 v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~   83 (388)
T PRK06366          4 VYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYT   83 (388)
T ss_pred             EEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCccee
Confidence            3467776655444221 11 112345577999999999999999998753 11  11111101111   11221111122


Q ss_pred             ccccccccchHHHHHHHHHhhhccc
Q 045789           97 IGHLLGASGAAEAVATIKAIQTGWI  121 (206)
Q Consensus        97 ~Gh~~~asG~~~l~~~~l~l~~~~i  121 (206)
                      + +..++||+..+..+...++.|..
T Consensus        84 v-~~~caSg~~av~~Aa~~I~sG~~  107 (388)
T PRK06366         84 V-NVVCASGMLAVESAAREIMLGER  107 (388)
T ss_pred             e-echhhHHHHHHHHHHHHHhcCCC
Confidence            2 24689999999999999988853

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=83.89  E-value=4.2  Score=36.42  Aligned_cols=93  Identities=17%  Similarity=0.025  Sum_probs=54.7

Q ss_pred             EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhh-cceeccccccccccccc
Q 045789           25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQ-ALRMNSTKSLIGHLLGA  103 (206)
Q Consensus        25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~-a~~v~s~k~~~Gh~~~a  103 (206)
                      ..|.|++.+.-+.+... . ...-..+++++||++|||+++|||.+-..+..... +...+. .+-+......-.+..++
T Consensus         7 vaIvG~g~t~~~~~~~~-~-~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~-~~~~~~~~lGl~~~~~~~v~~gg~   83 (388)
T PRK08142          7 AYIVGAYEHPTRKAPDK-S-VAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL-GPASMVDYLGLKLRHVDSTETGGS   83 (388)
T ss_pred             EEEEEEeeccceeCCCC-C-HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc-cHHHHHHhCCCCCeeeccccCCcH
Confidence            34888887765543211 1 13556789999999999999999986542111111 111111 12222111222345678


Q ss_pred             cchHHHHHHHHHhhhcc
Q 045789          104 SGAAEAVATIKAIQTGW  120 (206)
Q Consensus       104 sG~~~l~~~~l~l~~~~  120 (206)
                      +|...+..+...++.|.
T Consensus        84 s~~~a~~~A~~~I~sG~  100 (388)
T PRK08142         84 SYLAHVGHAAQAIAAGK  100 (388)
T ss_pred             HHHHHHHHHHHHHHcCC
Confidence            88888888888888874

>PRK06059 lipid-transfer protein; Provisional

Probab=83.69  E-value=2.4  Score=37.91  Aligned_cols=92  Identities=21%  Similarity=0.066  Sum_probs=53.5

Q ss_pred             EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc--CCHhh--hhc--ceecccccccc
Q 045789           25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL--GDLRE--YQA--LRMNSTKSLIG   98 (206)
Q Consensus        25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~--~D~~E--~~a--~~v~s~k~~~G   98 (206)
                      ..|.|++.+.-++..   .....-..+++++||+++||+++|||+|-. ++....  .....  ..+  +-+.......=
T Consensus         6 v~Ivg~~~t~~~r~~---~~~~~La~~A~~~Al~dAgl~~~dId~vi~-~~~~~~~~~~~~~a~~va~~lG~~~~~~~~v   81 (399)
T PRK06059          6 VYILGAGMHPWGKWG---RDFVEYGVVAARAALADAGLDWRDVQLVVG-ADTIRNGYPGFVAGATFAQALGWNGAPVSSS   81 (399)
T ss_pred             EEEEEecccccCCCC---CCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCccCCccHHHHHHHHhCCCCCceecc
Confidence            457787766544321   122455678999999999999999998763 221111  11111  111  22222222223


Q ss_pred             ccccccchHHHHHHHHHhhhcc
Q 045789           99 HLLGASGAAEAVATIKAIQTGW  120 (206)
Q Consensus        99 h~~~asG~~~l~~~~l~l~~~~  120 (206)
                      +..+++|+..|..+...++.|.
T Consensus        82 ~~~Casg~~al~~A~~~I~sG~  103 (399)
T PRK06059         82 YAACASGSQALQSARAQILAGL  103 (399)
T ss_pred             cchhHHHHHHHHHHHHHHHCCC
Confidence            4566777888888888887764

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=83.51  E-value=3.2  Score=37.74  Aligned_cols=101  Identities=15%  Similarity=0.017  Sum_probs=58.1

Q ss_pred             hcCCceeEEEEEEEecCCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCcccccccccc-CCCCCc-CCHhhhhcceeccc
Q 045789           18 KRGTNIYAEILDGSLTCDAYH-ITAPHPE-GVGMVSCMEKALAKSGVAKEDVNYINAH-APSTRL-GDLREYQALRMNST   93 (206)
Q Consensus        18 ~~g~~i~a~I~g~~~~~dg~~-~~~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~-~D~~E~~a~~v~s~   93 (206)
                      +.|.++|  |.|.+.+--+.. ....+.+ ..-...+++++|++++|+++|||.+..- ..+... .......++..+-.
T Consensus         4 ~~~~~V~--Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~   81 (430)
T TIGR02446         4 RQGERIA--IVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMN   81 (430)
T ss_pred             CcCCCEE--EEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCC
Confidence            3456554  788776655543 2222233 3344779999999999999999976542 211110 11222211111111


Q ss_pred             ---cccccccccccchHHHHHHHHHhhhcc
Q 045789           94 ---KSLIGHLLGASGAAEAVATIKAIQTGW  120 (206)
Q Consensus        94 ---k~~~Gh~~~asG~~~l~~~~l~l~~~~  120 (206)
                         ....=+..++||+..+..+...++.|.
T Consensus        82 ~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~  111 (430)
T TIGR02446        82 VHTDAYSVTRACATSFQSAVNVAESIMAGA  111 (430)
T ss_pred             CCCchhhhhhhhhHHHHHHHHHHHHHHCCC
Confidence               111113458999999999999998774

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=82.48  E-value=3.7  Score=37.20  Aligned_cols=95  Identities=19%  Similarity=0.088  Sum_probs=53.9

Q ss_pred             EEEEEEEecCCCCCCCCC--CCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCH-hh--hhcceecc----ccc
Q 045789           25 AEILDGSLTCDAYHITAP--HPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL-RE--YQALRMNS----TKS   95 (206)
Q Consensus        25 a~I~g~~~~~dg~~~~~~--~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~-~E--~~a~~v~s----~k~   95 (206)
                      .+|.|.+.+.-+...+..  .....-..++++++|+++|++++|||+|-.. +.+..++. ..  ..+..++-    ...
T Consensus         5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~p~~   83 (426)
T PRK08170          5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCGEKVPAW   83 (426)
T ss_pred             EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcCCCceee
Confidence            347777766555432211  1224455779999999999999999987642 22222221 10  01111111    111


Q ss_pred             cccccccccchHHHHHHHHHhhhccc
Q 045789           96 LIGHLLGASGAAEAVATIKAIQTGWI  121 (206)
Q Consensus        96 ~~Gh~~~asG~~~l~~~~l~l~~~~i  121 (206)
                      .+ +..+++|+..+..+...++.|..
T Consensus        84 ~v-~~~CaSg~~al~~A~~~I~sG~~  108 (426)
T PRK08170         84 TV-QRNCASGMQALDSAAANIALGRA  108 (426)
T ss_pred             ec-cchhhHHHHHHHHHHHHHHCCCC
Confidence            11 23378889999999888887743

>PLN03171 chalcone synthase-like protein; Provisional

Probab=82.37  E-value=1.5  Score=39.47  Aligned_cols=64  Identities=19%  Similarity=0.166  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHHH---------cCCCccccccccccCCCCCcCCHhhhhc-ceecc------ccccccccccccchHHHH
Q 045789           47 VGMVSCMEKALAK---------SGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNS------TKSLIGHLLGASGAAEAV  110 (206)
Q Consensus        47 ~~~~~~~~~al~~---------Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s------~k~~~Gh~~~asG~~~l~  110 (206)
                      ..+.+.+++++++         +|++++||+++ .|=.+-..-|.++..- ++-.-      +-..+|++.+++=...|-
T Consensus       279 ~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~  357 (399)
T PLN03171        279 GLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALD  357 (399)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHH
Confidence            3444455666654         58889999988 6866555555443332 22211      224578888765444444


Q ss_pred             H
Q 045789          111 A  111 (206)
Q Consensus       111 ~  111 (206)
                      .
T Consensus       358 ~  358 (399)
T PLN03171        358 E  358 (399)
T ss_pred             H
Confidence            3

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	206
1j3n_A	408	Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei		1e-30
1e5m_A	416	Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas		6e-26
2gqd_A	437	The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii		6e-24
2c9h_A	444	Structure Of Mitochondrial Beta-Ketoacyl Synthase L		7e-23
2iwy_A	438	Human Mitochondrial Beta-ketoacyl Acp Synthase Leng		8e-23
1w0i_A	431	Arabidopsis Thaliana Mitochondrial Kas Length = 431		1e-22
4f32_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		1e-21
4ddo_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		1e-21
3o04_A	413	Crystal Structure Of The Beta-Keto-Acyl Carrier Pro		3e-21
2rjt_A	428	Crystal Structure Analysis Of A Surface Entropy Red		3e-21
1ox0_A	430	The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie		5e-21
3hnz_A	427	Structure Of E. Coli Fabf(C163a) In Complex With Pl		2e-20
2gfv_A	427	Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng		2e-20
1b3n_A	412	Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta		2e-20
2gfw_A	427	Structure Of Wild Type E. Coli Fabf (Kasii) Length		2e-20
2alm_A	431	Crystal Structure Analysis Of A Mutant Beta-Ketoacy		6e-20
2gfy_A	427	Structure Of E. Coli Fabf(K335a) Mutant With Covale		1e-19
2gp6_A	434	X-Ray Crystal Structure Of Mycobacterium Tuberculos		1e-19
2wgf_A	416	Crystal Structure Of Mycobacterium Tuberculosis C17		5e-19
2wgd_A	416	Crystal Structure Of Kasa Of Mycobacterium Tubercul		6e-19
3e60_A	424	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		3e-16
1fj4_A	406	The Structure Of Beta-Ketoacyl-[acyl Carrier Protei		3e-16
1dd8_A	406	Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr		3e-16
1f91_A	406	Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In		3e-16
2vb7_C	406	Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap		4e-16
1ek4_A	418	Beta-Ketoacyl [acyl Carrier Protein] Synthase I In		4e-16
1h4f_A	406	E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha		7e-16
3kzu_A	428	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		8e-16
4ewg_A	412	Crystal Structure Of A Beta-Ketoacyl Synthase From		1e-15
2byw_A	418	Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C		2e-15
2byz_A	418	Structure Of E. Coli Kas I H298q Mutant In Complex		2e-15
2byy_A	418	E. Coli Kas I H298e Mutation Length = 418		2e-15
3oyt_A	410	1.84 Angstrom Resolution Crystal Structure Of 3-Oxo		3e-15
3lrf_A	428	Crystal Structure Of Beta-Ketoacyl Synthase From Br		4e-14
1tqy_A	424	The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le		4e-14
3u0f_A	411	The Structure Of Beta-Ketoacyl Synthase From Brucel		4e-14
2hg4_A	917	Structure Of The Ketosynthase-acyltransferase Didom		6e-07
2qo3_A	915	Crystal Structure Of [ks3][at3] Didomain From Modul		8e-07
3hhd_A	965	Structure Of The Human Fatty Acid Synthase Ks-Mat D		8e-07
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		7e-06

>pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408

Iteration: 1
 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/131 (49%), Positives = 86/131 (65%), Gaps = 11/131 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAKKRG  IYAE++    + DA+HIT PHPEG G    M +AL  +G+A E V YINAH 
Sbjct: 243 HAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHG 302
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST +GD  E  A++           ++STKS+IGHLLGA+GA EA+AT++A+  G I P
Sbjct: 303 TSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPP 362
Query: 124 NLNLENPDKHV 134
            +NLE+PD  +
Sbjct: 363 TINLEDPDPEL 373

>pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416

Iteration: 1
 Score =  113 bits (283), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 83/143 (58%), Gaps = 12/143 (8%)
Query: 16  AKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
           A  RG  IY E++  ++TCDAYHITAP P+G G    +  AL  SG+  E V+YINAH  
Sbjct: 250 ALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGT 309
Query: 76  STRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
           ST   D+ E +A++           ++STKS+ GHLLG SG  EAVAT+ AI    + P 
Sbjct: 310 STPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPT 369
Query: 125 LNLENPDKHV-LSRTSGASAAFI 146
           +NLENPD    L    G S A I
Sbjct: 370 INLENPDPECDLDYVPGQSRALI 392

>pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437

Iteration: 1
 Score =  107 bits (266), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 11/127 (8%)
Query: 16  AKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
           A+ RG NIYAEI+    T DAYHITAP PEG G    M+ A+  +G+  +DV Y+NAH  
Sbjct: 270 AQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGT 329
Query: 76  STRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
           ST +GDL E +A           L+++STKS+ GHLLGA+G  EA+ +  +I+   + P 
Sbjct: 330 STPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPT 389
Query: 125 LNLENPD 131
           ++   PD
Sbjct: 390 IHAVTPD 396

>pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444

Iteration: 1
 Score =  103 bits (257), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 59/125 (47%), Positives = 75/125 (60%), Gaps = 11/125 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA +R   IYAE+L   L+ DA HITAP PEG G + CM  AL  +GV  E+++YINAHA
Sbjct: 275 HAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHA 334
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST LGD  E +A++           ++STK   GHLLGA+GA EA  T  A     + P
Sbjct: 335 TSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPP 394
Query: 124 NLNLE 128
            LNL+
Sbjct: 395 TLNLD 399

>pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438

Iteration: 1
 Score =  103 bits (256), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 59/125 (47%), Positives = 75/125 (60%), Gaps = 11/125 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA +R   IYAE+L   L+ DA HITAP PEG G + CM  AL  +GV  E+++YINAHA
Sbjct: 269 HAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHA 328
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST LGD  E +A++           ++STK   GHLLGA+GA EA  T  A     + P
Sbjct: 329 TSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPP 388
Query: 124 NLNLE 128
            LNL+
Sbjct: 389 TLNLD 393

>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 78/130 (60%), Gaps = 13/130 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAK+RG  IYAE+    ++ DA+HIT P  +G G V  M +AL +SG+    ++Y+NAHA
Sbjct: 262 HAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHA 321
Query: 75  PSTRLGDLREYQALR-------------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWI 121
            ST +GD  E +A++              +STK   GHLLGA+GA EA+ +I AI  G  
Sbjct: 322 TSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVA 381
Query: 122 HPNLNLENPD 131
              LN++NPD
Sbjct: 382 PMTLNVKNPD 391

>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451

Iteration: 1
 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 76/127 (59%), Gaps = 10/127 (7%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG    AEI+    T DAYH+TA   +G G +  M+ AL    VA E V+Y+NAHA
Sbjct: 276 HALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHA 335
Query: 75  PSTRLGDLREYQALR----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
            ST +GD  E +AL+          ++STKS  GHLLGA+GA EA  +I A++ G +   
Sbjct: 336 TSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGT 395
Query: 125 LNLENPD 131
           LNLE+PD
Sbjct: 396 LNLEHPD 402

>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 76/127 (59%), Gaps = 10/127 (7%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG    AEI+    T DAYH+TA   +G G +  M+ AL    VA E V+Y+NAHA
Sbjct: 276 HALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHA 335
Query: 75  PSTRLGDLREYQALR----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
            ST +GD  E +AL+          ++STKS  GHLLGA+GA EA  +I A++ G +   
Sbjct: 336 TSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGT 395
Query: 125 LNLENPD 131
           LNLE+PD
Sbjct: 396 LNLEHPD 402

>pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413

Iteration: 1
 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAK RG  IYAEI+    T DAYHITAP P G G     + A+  +G+  + V+YINAH 
Sbjct: 245 HAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAXKXAIDDAGLTPDKVDYINAHG 304
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST   D  E QA++           ++STKS  GH LGASG  EA+  +  I+   I P
Sbjct: 305 TSTPYNDEYETQAIKTVFGEHAKKLAISSTKSXTGHTLGASGGIEAIFALLTIRDNIIAP 364
Query: 124 NLNLENPDK 132
            ++L+N D+
Sbjct: 365 TIHLKNQDE 373

>pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428

Iteration: 1
 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 75/115 (65%), Gaps = 8/115 (6%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA+KRG  I AE++    TCDAYH+T+PHPEG G +  ++ AL ++ ++ E V Y+NAH 
Sbjct: 264 HAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHG 323
Query: 75  PSTRLGDLREY--------QALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWI 121
            ST   +  E         +A+ ++STKS  GHLLGA+GA EA+ TI+A++  ++
Sbjct: 324 TSTPANEKGESGAIVAVLGKAVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFV 378

>pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430

Iteration: 1
 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 74/115 (64%), Gaps = 8/115 (6%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA+KRG  I AE++    TCDAYH+T+PHPEG G +  ++ AL ++ ++ E V Y+NAH 
Sbjct: 264 HAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHG 323
Query: 75  PSTRLGDLREYQAL--------RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWI 121
            ST   +  E  A+         ++STKS  GHLLGA+GA EA+ TI+A++  ++
Sbjct: 324 TSTPANEKGESGAIVAVLGKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFV 378

>pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAKKRG  IYAE++   ++ DAYH+T+P   G G    M  AL  +G+    + Y+NAH 
Sbjct: 260 HAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHG 319
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST  GD  E QA++           ++STKS+ GHLLGA+GA E++ +I A++   + P
Sbjct: 320 TSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPP 379
Query: 124 NLNLENPDK 132
            +NL+NPD+
Sbjct: 380 TINLDNPDE 388

>pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAKKRG  IYAE++   ++ DAYH+T+P   G G    M  AL  +G+    + Y+NAH 
Sbjct: 260 HAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHG 319
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST  GD  E QA++           ++STKS+ GHLLGA+GA E++ +I A++   + P
Sbjct: 320 TSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPP 379
Query: 124 NLNLENPDK 132
            +NL+NPD+
Sbjct: 380 TINLDNPDE 388

>pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAKKRG  IYAE++   ++ DAYH+T+P   G G    M  AL  +G+    + Y+NAH 
Sbjct: 245 HAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHG 304
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST  GD  E QA++           ++STKS+ GHLLGA+GA E++ +I A++   + P
Sbjct: 305 TSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPP 364
Query: 124 NLNLENPDK 132
            +NL+NPD+
Sbjct: 365 TINLDNPDE 373

>pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAKKRG  IYAE++   ++ DAYH+T+P   G G    M  AL  +G+    + Y+NAH 
Sbjct: 260 HAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHG 319
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST  GD  E QA++           ++STKS+ GHLLGA+GA E++ +I A++   + P
Sbjct: 320 TSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPP 379
Query: 124 NLNLENPDK 132
            +NL+NPD+
Sbjct: 380 TINLDNPDE 388

>pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 8/115 (6%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA+KRG  I AE++    TCDAYH+T+PHPEG G +  ++ AL ++ ++ E V Y+NA  
Sbjct: 265 HAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAAG 324
Query: 75  PSTRLGDLREYQAL--------RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWI 121
            ST   +  E  A+         ++STKS  GHLLGA+GA EA+ TI+A++  ++
Sbjct: 325 TSTPANEKGESGAIVAVLGKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFV 379

>pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 78/129 (60%), Gaps = 11/129 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAKKRG  IYAE++   ++ DAYH+T+P   G G    M  AL  +G+    + Y+NAH 
Sbjct: 260 HAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHG 319
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST  GD  E QA++           ++ST S+ GHLLGA+GA E++ +I A++   + P
Sbjct: 320 TSTPAGDKAEAQAVKTIFGEAASRVLVSSTASMTGHLLGAAGAVESIYSILALRDQAVPP 379
Query: 124 NLNLENPDK 132
            +NL+NPD+
Sbjct: 380 TINLDNPDE 388

>pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAK RG NI A I+  S+T D +H+ AP P G      + +A+  +G+A  D++++NAHA
Sbjct: 270 HAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHA 329
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
             T++GDL E +A+          + + KS +GH +GA GA E++ T+ A++   I P L
Sbjct: 330 TGTQVGDLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTL 389
Query: 126 NLENPDKHV 134
           NL N D  +
Sbjct: 390 NLVNLDPEI 398

>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416

Iteration: 1
 Score = 90.5 bits (223), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAK RG    A +L   +T DA+H+ AP  +GV     M ++L  +G++  D++++NAH 
Sbjct: 253 HAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHG 312
Query: 75  PSTRLGDLREYQALRMN--------STKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLN 126
            +T +GD  E  A+R+         + KS +GH +GA GA E+V T+  ++ G I P LN
Sbjct: 313 TATPIGDAAEANAIRVAGCDQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLN 372
Query: 127 LENPDKHV 134
            E PD  +
Sbjct: 373 YETPDPEI 380

>pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAK RG    A +L   +T DA+H+ AP  +GV     M ++L  +G++  D++++NAH 
Sbjct: 253 HAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHG 312
Query: 75  PSTRLGDLREYQALRMN--------STKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLN 126
            +T +GD  E  A+R+         + KS +GH +GA GA E+V T+  ++ G I P LN
Sbjct: 313 TATPIGDAAEANAIRVAGCDQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLN 372
Query: 127 LENPDKHV 134
            E PD  +
Sbjct: 373 YETPDPEI 380

>pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/127 (48%), Positives = 76/127 (59%), Gaps = 12/127 (9%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAKKRG  IYAEI+   L+ DAYHITAP   G G    M  AL ++ V   +++YINAH 
Sbjct: 257 HAKKRGARIYAEIIGYGLSGDAYHITAPSESGEGAQRSMMAALKRAQVNVSELDYINAHG 316
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST + D+ E  A+            M+STKS IGHLLGA+GAAEA+  + AI+      
Sbjct: 317 TST-MADVIELAAVERVLGYYAPQVSMSSTKSSIGHLLGAAGAAEAIFCVLAIRDNIAPA 375
Query: 124 NLNLENP 130
            LNLENP
Sbjct: 376 TLNLENP 382

>pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   GV    ++Y+N+H 
Sbjct: 245 HALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAM--HGV-DTPIDYLNSHG 299
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         +++TK++ GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 300 TSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 359
Query: 126 NLENPDKH 133
           N+E  D+ 
Sbjct: 360 NIEELDEQ 367

>pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   GV    ++Y+N+H 
Sbjct: 245 HALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAM--HGV-DTPIDYLNSHG 299
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         +++TK++ GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 300 TSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 359
Query: 126 NLENPDKH 133
           N+E  D+ 
Sbjct: 360 NIEELDEQ 367

>pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   GV    ++Y+N+H 
Sbjct: 245 HALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAM--HGV-DTPIDYLNSHG 299
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         +++TK++ GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 300 TSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 359
Query: 126 NLENPDKH 133
           N+E  D+ 
Sbjct: 360 NIEELDEQ 367

>pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   GV    ++Y+N+H 
Sbjct: 245 HALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAM--HGV-DTPIDYLNSHG 299
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         +++TK++ GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 300 TSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 359
Query: 126 NLENPDKH 133
           N+E  D+ 
Sbjct: 360 NIEELDEQ 367

>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   GV    ++Y+N+H 
Sbjct: 257 HALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAM--HGV-DTPIDYLNSHG 311
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         +++TK++ GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 312 TSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 371
Query: 126 NLENPDKH 133
           N+E  D+ 
Sbjct: 372 NIEELDEQ 379

>pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406

Iteration: 1
 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   GV    ++Y+N+H 
Sbjct: 245 HALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAM--HGV-DTPIDYLNSHG 299
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         +++T+++ GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 300 TSTPVGDVKELAAIREVFGDKSPAISATRAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 359
Query: 126 NLENPDKH 133
           N+E  D+ 
Sbjct: 360 NIEELDEQ 367

>pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428

Iteration: 1
 Score = 80.1 bits (196), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 12/127 (9%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG  IYAE++   ++ DA+HITAP   G G   CM  AL ++G+  ++++YINAH 
Sbjct: 261 HALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHG 320
Query: 75  PSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            ST + D  E  A+            M+STKS IGHLLGA+GAAEAV +  AI+      
Sbjct: 321 TST-MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPA 379
Query: 124 NLNLENP 130
            LNL+NP
Sbjct: 380 TLNLDNP 386

>pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HAK RG  I+AEI+      D  H+T   P    M   M+ AL  + +    + Y+NAH 
Sbjct: 249 HAKARGATIHAEIVGFGCNSDGAHMT--QPTASTMARAMQLALEDAKLDANAIAYVNAHG 306
Query: 75  PSTRLGDLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLN 126
            ST  GD+ E QA        + ++S KS +GH LGA GA EA  TI+ ++  W  P LN
Sbjct: 307 TSTDRGDVAESQATARTFGERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLN 366
Query: 127 LENPD 131
           L   D
Sbjct: 367 LTEVD 371

>pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   GV    ++Y+N+H 
Sbjct: 257 HALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAM--HGV-DTPIDYLNSHG 311
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         +++T ++ GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 312 TSTPVGDVKELAAIREVFGDKSPAISATAAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 371
Query: 126 NLENPDKH 133
           N+E  D+ 
Sbjct: 372 NIEELDEQ 379

>pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   GV    ++Y+N+  
Sbjct: 257 HALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAM--HGV-DTPIDYLNSQG 311
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         +++TK++ GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 312 TSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 371
Query: 126 NLENPDKH 133
           N+E  D+ 
Sbjct: 372 NIEELDEQ 379

>pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   GV    ++Y+N+  
Sbjct: 257 HALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAM--HGV-DTPIDYLNSEG 311
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         +++TK++ GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 312 TSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 371
Query: 126 NLENPDKH 133
           N+E  D+ 
Sbjct: 372 NIEELDEQ 379

>pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 14/128 (10%)
Query: 15  HAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74
           HA  RG +IYAEI+    T D     AP  EG   V C + A A  GV    ++Y N H 
Sbjct: 249 HALARGAHIYAEIVGYGATSDGADXVAPSGEGA--VRCXQXAXA--GV-DTPIDYXNVHG 303
Query: 75  PSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNL 125
            ST +GD++E  A+R         ++STK+  GH LGA+G  EA+ ++  ++ G+I P++
Sbjct: 304 TSTPVGDVKELGAIREVFGNNTPAISSTKAXTGHSLGAAGVHEAIFSLLXVEHGFIAPSI 363
Query: 126 NLENPDKH 133
           N++N D+ 
Sbjct: 364 NIDNLDEQ 371

>pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 16  AKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
           A  RG  IY EI+    T D Y + AP  EG   + CM+ AL+        ++YIN HA 
Sbjct: 265 ALARGAKIYGEIVGYGATSDGYDMVAPSGEGA--IRCMKMALS---TVTSKIDYINPHAT 319
Query: 76  STRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
           ST  GD  E +A+R           + +TKSL GH LGA+G  EA+ ++  +Q  +I  +
Sbjct: 320 STPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICES 379
Query: 125 LNLENPDKHVLSRTSGASAAFISIPVIKQ 153
            ++E  D            AF  +P++++
Sbjct: 380 AHIEELDP-----------AFADMPIVRK 397

>pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 16  AKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
           A  RG  I+AEI   +  C+AYH+T    +G  M   +  AL +S     D++YINAH  
Sbjct: 252 ALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGS 311
Query: 76  STRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
            TR  D  E  A +           ++S KS++GH LGA G+ E  A + A++ G + P 
Sbjct: 312 GTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPT 371
Query: 125 LNLENPDKHVLSRTSGASAAFISIPV-IKQFKTRFVLI--SFNGSFLSSLYM 173
            NL         RTS        +P+  ++ K R VL   S  G F S++ +
Sbjct: 372 ANL---------RTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVL 414

>pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 16  AKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
           A  RG  IY EI+    T D Y + AP  EG   + CM+ AL+        ++YIN HA 
Sbjct: 248 ALARGAKIYGEIVGYGATSDGYDMVAPSGEGA--IRCMKMALS---TVTSKIDYINPHAT 302
Query: 76  STRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPN 124
           ST  GD  E +A+R           + +TKSL GH LGA+G  EA+ ++  +Q  +I  +
Sbjct: 303 STPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICES 362
Query: 125 LNLENPDKHVLSRTSGASAAFISIPVIKQ 153
            ++E  D            AF  +P++++
Sbjct: 363 AHIEELDP-----------AFADMPIVRK 380

>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Query: 16  AKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
           A++ G  + A +   ++  D        P G      + +AL  +GV   DV+Y+ AH  
Sbjct: 277 ARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGT 336
Query: 76  STRLGDLREYQALR--------------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWI 121
            TRLGD  E  AL               + S KS IGH   A+G A     + A++ G  
Sbjct: 337 GTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVXKAVLALRHGEX 396
Query: 122 HPNLNLENPDKHV 134
              L+ + P   +
Sbjct: 397 PRTLHFDEPSPQI 409

>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 16  AKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
           A++ G  + A +   +L  D        P G      + +AL   G+   DV+ + AH  
Sbjct: 255 ARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGT 314
Query: 76  STRLGDLREYQALR--------------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWI 121
            T LGD  E  AL               + S KS IGH   A+G    +  + A++ G +
Sbjct: 315 GTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGEL 374
Query: 122 HPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNG 165
              L++E P  HV   + G +    + P  +  +TR   +S  G
Sbjct: 375 PATLHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFG 418

>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 17  KKRGTNIYAEILDGSLTCDAYHITA-PHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
           K     +YA IL+     D +       P G      +      +GVA E   YI AH  
Sbjct: 238 KSLARRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGT 297
Query: 76  STRLGDLREY------------QALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            T++GD +E             + L + STKS +GH   ASG A     + +++ G   P
Sbjct: 298 GTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAP 357
Query: 124 NLNLENPDKHVLSRTSG 140
           NL+  +P+  + +   G
Sbjct: 358 NLHFHSPNPEIPALLDG 374

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 17  KKRGTNIYAEILD-GSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75
           K     +YA IL+ G+ T  +       P G      +    A +G   E + YI AH  
Sbjct: 236 KSLARRVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGT 295
Query: 76  STRLGDLREY------------QALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123
            T++GD +E             + L + STKS +GH   ASG A  +  + +++ G   P
Sbjct: 296 GTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAP 355
Query: 124 NLNLENPDKHVLSRTSG 140
           NL+   P+  + +   G
Sbjct: 356 NLHYHTPNPEIPALQDG 372

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	206
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	3e-70
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	3e-70
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	4e-69
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	5e-69
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	6e-69
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	8e-69
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	1e-68
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	1e-68
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	2e-68
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	4e-68
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	5e-68
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	6e-68
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	6e-68
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	3e-67
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	1e-60
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	1e-59
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	3e-59
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-38
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	4e-35
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	4e-29
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	2e-27
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	2e-28
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	6e-21
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-22
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	7e-17
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	2e-16
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	2e-16

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430

 Score =  218 bits (559), Expect = 3e-70
 Identities = 60/139 (43%), Positives = 87/139 (62%), Gaps = 8/139 (5%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEG+G+L+LE LEHA+KRG  I AE++    TCDAYH+T+PHPEG G +  ++ AL ++
Sbjct: 250 MGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEA 309

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA--------LRMNSTKSLIGHLLGASGAAEAVAT 112
            ++ E V Y+NAH  ST   +  E  A        + ++STKS  GHLLGA+GA EA+ T
Sbjct: 310 EISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKEVPVSSTKSFTGHLLGAAGAVEAIVT 369

Query: 113 IKAIQTGWIHPNLNLENPD 131
           I+A++  ++          
Sbjct: 370 IEAMRHNFVPMTAGTSEVS 388

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416

 Score =  218 bits (558), Expect = 3e-70
 Identities = 52/139 (37%), Positives = 80/139 (57%), Gaps = 8/139 (5%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
            GE   ++L+E  EHAK RG    A +L   +T DA+H+ AP  +GV     M ++L  +
Sbjct: 239 FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELA 298

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR--------MNSTKSLIGHLLGASGAAEAVAT 112
           G++  D++++NAH  +T +GD  E  A+R        + + KS +GH +GA GA E+V T
Sbjct: 299 GLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQAAVYAPKSALGHSIGAVGALESVLT 358

Query: 113 IKAIQTGWIHPNLNLENPD 131
           +  ++ G I P LN E PD
Sbjct: 359 VLTLRDGVIPPTLNYETPD 377

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438

 Score =  216 bits (552), Expect = 4e-69
 Identities = 71/142 (50%), Positives = 87/142 (61%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGA VL+LEE EHA +R   IYAE+L   L+ DA HITAP PEG G + CM  AL  +
Sbjct: 255 MGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDA 314

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           GV  E+++YINAHA ST LGD  E +A           L ++STK   GHLLGA+GA EA
Sbjct: 315 GVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEA 374

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
             T  A     + P LNL+  +
Sbjct: 375 AFTTLACYYQKLPPTLNLDCSE 396

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408

 Score =  215 bits (550), Expect = 5e-69
 Identities = 77/142 (54%), Positives = 96/142 (67%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAGVL+LE  EHAKKRG  IYAE++    + DA+HIT PHPEG G    M +AL  +
Sbjct: 229 MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDA 288

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           G+A E V YINAH  ST +GD  E  A           L ++STKS+IGHLLGA+GA EA
Sbjct: 289 GIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEA 348

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           +AT++A+  G I P +NLE+PD
Sbjct: 349 IATVQALYHGVIPPTINLEDPD 370

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434

 Score =  215 bits (551), Expect = 6e-69
 Identities = 56/140 (40%), Positives = 84/140 (60%), Gaps = 9/140 (6%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
            GEG  +LL+E  EHAK RG NI A I+  S+T D +H+ AP P G      + +A+  +
Sbjct: 256 FGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLA 315

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVA 111
           G+A  D++++NAHA  T++GDL E +A+          + + KS +GH +GA GA E++ 
Sbjct: 316 GLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESIL 375

Query: 112 TIKAIQTGWIHPNLNLENPD 131
           T+ A++   I P LNL N D
Sbjct: 376 TVLALRDQVIPPTLNLVNLD 395

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413

 Score =  214 bits (548), Expect = 8e-69
 Identities = 66/142 (46%), Positives = 86/142 (60%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +GEGAG+++LEE EHAK RG  IYAEI+    T DAYHITAP P G G    M+ A+  +
Sbjct: 231 IGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDA 290

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           G+  + V+YINAH  ST   D  E QA           L ++STKS+ GH LGASG  EA
Sbjct: 291 GLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEA 350

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           +  +  I+   I P ++L+N D
Sbjct: 351 IFALLTIRDNIIAPTIHLKNQD 372

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416

 Score =  214 bits (548), Expect = 1e-68
 Identities = 71/142 (50%), Positives = 91/142 (64%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEG+G+L+LEELE A  RG  IY E++  ++TCDAYHITAP P+G G    +  AL  S
Sbjct: 235 MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDS 294

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           G+  E V+YINAH  ST   D+ E +A           + ++STKS+ GHLLG SG  EA
Sbjct: 295 GLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEA 354

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           VAT+ AI    + P +NLENPD
Sbjct: 355 VATVMAIAEDKVPPTINLENPD 376

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451

 Score =  215 bits (550), Expect = 1e-68
 Identities = 65/141 (46%), Positives = 88/141 (62%), Gaps = 10/141 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGA ++++E L+HA  RG    AEI+    T DAYH+TA   +G G +  M+ AL   
Sbjct: 262 MGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMG 321

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR----------MNSTKSLIGHLLGASGAAEAV 110
            VA E V+Y+NAHA ST +GD  E +AL+          ++STKS  GHLLGA+GA EA 
Sbjct: 322 DVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAA 381

Query: 111 ATIKAIQTGWIHPNLNLENPD 131
            +I A++ G +   LNLE+PD
Sbjct: 382 FSILALRDGVLPGTLNLEHPD 402

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437

 Score =  214 bits (547), Expect = 2e-68
 Identities = 66/142 (46%), Positives = 91/142 (64%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+L++E LE A+ RG NIYAEI+    T DAYHITAP PEG G    M+ A+  +
Sbjct: 255 MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDA 314

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           G+  +DV Y+NAH  ST +GDL E +A           L+++STKS+ GHLLGA+G  EA
Sbjct: 315 GIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEA 374

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           + +  +I+   + P ++   PD
Sbjct: 375 IFSALSIKDSKVAPTIHAVTPD 396

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427

 Score =  213 bits (545), Expect = 4e-68
 Identities = 63/142 (44%), Positives = 90/142 (63%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +G+GAG+L+LEE EHAKKRG  IYAE++   ++ DAYH+T+P   G G    M  AL  +
Sbjct: 246 LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDA 305

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           G+    + Y+NAH  ST  GD  E QA           + ++STKS+ GHLLGA+GA E+
Sbjct: 306 GIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVES 365

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           + +I A++   + P +NL+NPD
Sbjct: 366 IYSILALRDQAVPPTINLDNPD 387

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424

 Score =  213 bits (544), Expect = 5e-68
 Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 11/142 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           + EGA + +LE+ + A  RG  I+AEI   +  C+AYH+T    +G  M   +  AL +S
Sbjct: 237 LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDES 296

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
                D++YINAH   TR  D  E  A             ++S KS++GH LGA G+ E 
Sbjct: 297 RTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEI 356

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
            A + A++ G + P  NL   D
Sbjct: 357 AACVLALEHGVVPPTANLRTSD 378

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431

 Score =  213 bits (544), Expect = 6e-68
 Identities = 66/144 (45%), Positives = 90/144 (62%), Gaps = 13/144 (9%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +GEG+GV++LEE EHAK+RG  IYAE+    ++ DA+HIT P  +G G V  M +AL +S
Sbjct: 248 IGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQS 307

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-------------LRMNSTKSLIGHLLGASGAA 107
           G+    ++Y+NAHA ST +GD  E +A             L  +STK   GHLLGA+GA 
Sbjct: 308 GLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAV 367

Query: 108 EAVATIKAIQTGWIHPNLNLENPD 131
           EA+ +I AI  G     LN++NPD
Sbjct: 368 EAIFSILAIHHGVAPMTLNVKNPD 391

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428

 Score =  212 bits (543), Expect = 6e-68
 Identities = 68/142 (47%), Positives = 90/142 (63%), Gaps = 12/142 (8%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           MGEGAG+++LEELEHA  RG  IYAE++   ++ DA+HITAP   G G   CM  AL ++
Sbjct: 247 MGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRA 306

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQA-----------LRMNSTKSLIGHLLGASGAAEA 109
           G+  ++++YINAH  ST + D  E  A           + M+STKS IGHLLGA+GAAEA
Sbjct: 307 GIVPDEIDYINAHGTST-MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEA 365

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           V +  AI+       LNL+NP 
Sbjct: 366 VFSTLAIRDNIAPATLNLDNPA 387

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412

 Score =  210 bits (538), Expect = 3e-67
 Identities = 57/139 (41%), Positives = 74/139 (53%), Gaps = 10/139 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +GEGA  L+LEE EHAK RG  I+AEI+      D  H+T P      M   M+ AL  +
Sbjct: 235 VGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTAS--TMARAMQLALEDA 292

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR--------MNSTKSLIGHLLGASGAAEAVAT 112
            +    + Y+NAH  ST  GD+ E QA          ++S KS +GH LGA GA EA  T
Sbjct: 293 KLDANAIAYVNAHGTSTDRGDVAESQATARTFGERMPISSLKSYVGHTLGACGALEAWWT 352

Query: 113 IKAIQTGWIHPNLNLENPD 131
           I+ ++  W  P LNL   D
Sbjct: 353 IEMMKRNWYAPTLNLTEVD 371

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415

 Score =  193 bits (494), Expect = 1e-60
 Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 13/141 (9%)

Query: 1   MGEGAGVLLLEELEHAKKRG-TNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAK 59
            GEG  +L+LE+   A+ RG  + Y E+   + T D    +       G+   +  AL  
Sbjct: 235 PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS---GRPAGLERAIRLALND 291

Query: 60  SGVAKEDVNYINAHAPSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAV 110
           +G   EDV+ + A        D  E +A+          +   K+  G L    G  + V
Sbjct: 292 AGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVV 351

Query: 111 ATIKAIQTGWIHPNLNLENPD 131
             + +++ G I P   + +  
Sbjct: 352 TALMSLREGVIAPTAGVTSVP 372

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406

 Score =  190 bits (486), Expect = 1e-59
 Identities = 51/140 (36%), Positives = 84/140 (60%), Gaps = 14/140 (10%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +  G G++++EELEHA  RG +IYAEI+    T D   + AP  EG   V CM+ A+   
Sbjct: 231 IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAMHG- 287

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR---------MNSTKSLIGHLLGASGAAEAVA 111
                 ++Y+N+H  ST +GD++E  A+R         +++TK++ GH LGA+G  EA+ 
Sbjct: 288 --VDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIY 345

Query: 112 TIKAIQTGWIHPNLNLENPD 131
           ++  ++ G+I P++N+E  D
Sbjct: 346 SLLMLEHGFIAPSINIEELD 365

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428

 Score =  190 bits (485), Expect = 3e-59
 Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 16/142 (11%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           +  GAGVL+LE+LE A  RG  IY EI+    T D Y + AP  EG   + CM+ AL+  
Sbjct: 250 IAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGA--IRCMKMALST- 306

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
                 ++YIN HA ST  GD  E +A+R           + +TKSL GH LGA+G  EA
Sbjct: 307 --VTSKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEA 364

Query: 110 VATIKAIQTGWIHPNLNLENPD 131
           + ++  +Q  +I  + ++E  D
Sbjct: 365 IYSLLMMQNNFICESAHIEELD 386

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score =  139 bits (352), Expect = 2e-38
 Identities = 34/187 (18%), Positives = 57/187 (30%), Gaps = 44/187 (23%)

Query: 3    EGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGV 62
            E   +   ++ E   +R   I+ E                  +    ++ +  ALA  G+
Sbjct: 1274 EAEEIPSEDQNEFLLERTREIHNEAESQLRAA-QQQWGNDFYKRDPRIAPLRGALATYGL 1332

Query: 63   AKEDVNYINAHAPSTRLGDLREYQALR---------------MNSTKSLIGHLLGASGAA 107
              +D+   + H  ST+  D  E   +                    K L GH  GA+GA 
Sbjct: 1333 TIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAW 1392

Query: 108  EAVATIKAIQTGWIHPNLNLENPD---------------------KHVLSRTS------G 140
                 ++ + +G I  N N +N D                     + V   TS      G
Sbjct: 1393 MMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSI-TSFGFGQKG 1451

Query: 141  ASAAFIS 147
              A  + 
Sbjct: 1452 GQAIVVH 1458

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score =  129 bits (327), Expect = 4e-35
 Identities = 24/171 (14%), Positives = 49/171 (28%), Gaps = 38/171 (22%)

Query: 1    MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
              +GAG+ ++ + + A K G  IY  +   +   D    + P P G G+++   +  +  
Sbjct: 1179 EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAP-GKGILTTAREHHSSV 1237

Query: 61   GVAK------------------------EDVNYINAHAPSTRLGDLREYQALR------- 89
              A                          ++  +   A      D  E+   R       
Sbjct: 1238 KYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNE 1297

Query: 90   ----MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLS 136
                + + +   G+         A         G    +L + +   H  S
Sbjct: 1298 AESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVAS--FHGTS 1346

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878

 Score =  112 bits (282), Expect = 4e-29
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 18/144 (12%)

Query: 4    GAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGV-GMVSCMEKALAKSGV 62
                   +E  + ++R  +I  E        +A              ++ +  ALA  G+
Sbjct: 1455 SEEDGPFDETAYLRERTEHIEREARRQ--EAEAQTSFGNEFWRRDSRIAPLRGALATWGL 1512

Query: 63   AKEDVNYINAHAPSTRLGDLREYQA---------------LRMNSTKSLIGHLLGASGAA 107
              +D+   + H  ST   D  E                  +     K L GH  GA+GA 
Sbjct: 1513 TIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAW 1572

Query: 108  EAVATIKAIQTGWIHPNLNLENPD 131
                 ++ + TG +  N N +N D
Sbjct: 1573 MLNGCLQVLNTGIVPGNRNADNVD 1596

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878

 Score =  108 bits (270), Expect = 2e-27
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 13/126 (10%)

Query: 1    MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
              +G GV ++   + A + G  IY  +   S   D    + P P G G+++   +     
Sbjct: 1353 ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAP-GQGVLTTAREKSGNF 1411

Query: 61   GVAKEDVNY-----------INAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASGAAEA 109
                 D+ Y           I     S  L    E  A++ +      G     +   E 
Sbjct: 1412 PSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIK-SQRSEEDGPFDETAYLRER 1470

Query: 110  VATIKA 115
               I+ 
Sbjct: 1471 TEHIER 1476

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887

 Score =  110 bits (276), Expect = 2e-28
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 16/145 (11%)

Query: 2    GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSG 61
             E   +   ++ E   +R   I+ E                  +    ++ +  ALA  G
Sbjct: 1472 LEAEEIPSEDQNEFLLERTREIHNEAESQLRAA-QQQWGNDFYKRDPRIAPLRGALATYG 1530

Query: 62   VAKEDVNYINAHAPSTRLGDLREYQALR---------------MNSTKSLIGHLLGASGA 106
            +  +D+   + H  ST+  D  E   +                    K L GH  GA+GA
Sbjct: 1531 LTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGA 1590

Query: 107  AEAVATIKAIQTGWIHPNLNLENPD 131
                  ++ + +G I  N N +N D
Sbjct: 1591 WMMNGALQILNSGIIPGNRNADNVD 1615

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887

 Score = 89.3 bits (221), Expect = 6e-21
 Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 37/147 (25%)

Query: 1    MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
              +GAG+ ++ + + A K G  IY  +   +   D    + P P G G+++   +  +  
Sbjct: 1378 EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAP-GKGILTTAREHHSSV 1436

Query: 61   GVAK------------------------EDVNYINAHAPSTRLGDLREYQALRMNSTKSL 96
              A                          ++  +   A      D  E+   R       
Sbjct: 1437 KYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLER------- 1489

Query: 97   IGHLLGASGAAEAVATIKAIQTGWIHP 123
                       EA + ++A Q  W + 
Sbjct: 1490 -----TREIHNEAESQLRAAQQQWGND 1511

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 94.2 bits (234), Expect = 1e-22
 Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 21/155 (13%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYH---ITAPHPEGVGMVSCMEKALA 58
            E    +LL +   A++    +YA IL+     D      +T P   G      +    A
Sbjct: 225 AEAVVAVLLTKKSLARR----VYATILNAGTNTDGSKEQGVTFPS--GDVQEQLIRSLYA 278

Query: 59  KSGVAKEDVNYINAHAPSTRLGDLREYQA------------LRMNSTKSLIGHLLGASGA 106
            +G   E + YI AH   T++GD +E               L + STKS +GH   ASG 
Sbjct: 279 PAGPDPESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGV 338

Query: 107 AEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGA 141
           A  +  + +++ G   PNL+   P+  + +   G 
Sbjct: 339 AALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGR 373

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965

 Score = 77.2 bits (191), Expect = 7e-17
 Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 23/156 (14%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLT-CDAYH---ITAPHPEGVGMVSCMEKAL 57
            EG   +LL +   A++    +YA IL  + T  D +    +T P   G      +    
Sbjct: 227 SEGVVAVLLTKKSLARR----VYATIL-NAGTNTDGFKEQGVTFPS--GDIQEQLIRSLY 279

Query: 58  AKSGVAKEDVNYINAHAPSTRLGDLREYQA------------LRMNSTKSLIGHLLGASG 105
             +GVA E   YI AH   T++GD +E               L + STKS +GH   ASG
Sbjct: 280 QSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASG 339

Query: 106 AAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGA 141
            A     + +++ G   PNL+  +P+  + +   G 
Sbjct: 340 LAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGR 375

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 26/153 (16%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEIL------DGSLTCDAYHITAPHPEGVGMVSCMEK 55
            EG  ++LLE L  A++ G  + A +       DG+    +  ++AP   G      + +
Sbjct: 241 SEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGA----SNGLSAPS--GPAQRRVIRQ 294

Query: 56  ALAKSGVAKEDVNYINAHAPSTRLGDLREYQAL--------------RMNSTKSLIGHLL 101
           AL   G+   DV+ + AH   T LGD  E  AL               + S KS IGH  
Sbjct: 295 ALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQ 354

Query: 102 GASGAAEAVATIKAIQTGWIHPNLNLENPDKHV 134
            A+G    +  + A++ G +   L++E P  HV
Sbjct: 355 AAAGVTGLLKVVLALRNGELPATLHVEEPTPHV 387

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917

 Score = 75.8 bits (187), Expect = 2e-16
 Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 28/154 (18%)

Query: 2   GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYH-------ITAPHPEGVGMVSCME 54
            EGAGVL+L+ L  A++ G  + A +L GS    A +       +TAP   G      + 
Sbjct: 263 AEGAGVLVLQRLSAARREGRPVLA-VLRGS----AVNQDGASNGLTAPS--GPAQQRVIR 315

Query: 55  KALAKSGVAKEDVNYINAHAPSTRLGDLREYQAL--------------RMNSTKSLIGHL 100
           +AL  +GV   DV+Y+ AH   TRLGD  E  AL               + S KS IGH 
Sbjct: 316 RALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHT 375

Query: 101 LGASGAAEAVATIKAIQTGWIHPNLNLENPDKHV 134
             A+G A  +  + A++ G +   L+ + P   +
Sbjct: 376 QAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQI 409

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	206
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	100.0
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	100.0
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	100.0
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	100.0
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	100.0
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	100.0
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	100.0
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	100.0
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	100.0
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	100.0
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	100.0
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	100.0
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	100.0
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	100.0
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	100.0
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	100.0
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	100.0
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	100.0
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.78
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.78
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	99.76
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.76
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.75
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	99.75
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	99.72
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.71
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.71
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.71
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.71
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.71
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.67
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.65
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	99.56
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.32
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	99.3
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	99.3
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	99.16
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	99.11
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	98.81
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	98.78
1u0m_A	382	Putative polyketide synthase; type III polyketide	98.78
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	98.5
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	98.46
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	98.05
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	98.0
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	97.7
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	97.67
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	96.84
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	96.5
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	96.43
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	96.41
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	95.74
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	95.72
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	95.64
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	95.64
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	95.32
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	95.29
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	95.25
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	94.91
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	94.66
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	94.64
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	94.3
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	94.12
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	93.25
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	91.61
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	91.59
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	88.77
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	87.61
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	86.86

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=100.00  E-value=1.8e-39  Score=312.89  Aligned_cols=179  Identities=27%  Similarity=0.352  Sum_probs=164.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|+|+++++||.+.+.+.|++.++.++|+++|++||++|+||+|||+|||||+.+
T Consensus       262 ~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~g  341 (917)
T 2hg4_A          262 LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLG  341 (917)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTH
T ss_pred             CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccC
Confidence            48999999999999999999999999999999999998888999999999999999999999999999999999999999


Q ss_pred             CHhhhhc--------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccc
Q 045789           81 DLREYQA--------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFI  146 (206)
Q Consensus        81 D~~E~~a--------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~  146 (206)
                      |++|..+              ++++++|+++||+++|+|+++++|++++|++++|||++|+++|||.++++..+++++++
T Consensus       342 D~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~  421 (917)
T 2hg4_A          342 DPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQ  421 (917)
T ss_dssp             HHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCS
T ss_pred             cHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCC
Confidence            9999877              56899999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCC-CCeEEEEEe-ecccceeEEEccccCCC
Q 045789          147 SIPVIKQ-FKTRFVLIS-FNGSFLSSLYMASCFRA  179 (206)
Q Consensus       147 ~~~~~~~-~~~~~~~~~-~~gG~n~~~vl~~~~~~  179 (206)
                      .++|+.. ..+++.+|+ +|||+|+|+||++++..
T Consensus       422 ~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~~  456 (917)
T 2hg4_A          422 ARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPEA  456 (917)
T ss_dssp             CEECCCCSSCCEEEEEEECTTSEEEEEEEEECCCC
T ss_pred             cccCCCCCCCCEEEEeeecCCCceEEEEeccCCcc
Confidence            9999863 334555555 59999999999997743

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=100.00  E-value=4.8e-39  Score=309.80  Aligned_cols=179  Identities=25%  Similarity=0.334  Sum_probs=166.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|+|+++++||.+.+.+.|++.++.++|+++|+++|++|+||+|||+|||||+.+
T Consensus       240 ~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~g  319 (915)
T 2qo3_A          240 FSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALG  319 (915)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTT
T ss_pred             ecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccC
Confidence            48999999999999999999999999999999999998888999999999999999999999999999999999999999


Q ss_pred             CHhhhhc--------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccc
Q 045789           81 DLREYQA--------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFI  146 (206)
Q Consensus        81 D~~E~~a--------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~  146 (206)
                      |++|..+              ++++++|+++||+++|+|+++++|++++|++++|||++|+++|||.++++..+++++++
T Consensus       320 D~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~  399 (915)
T 2qo3_A          320 DPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAG  399 (915)
T ss_dssp             HHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECSS
T ss_pred             CHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeecC
Confidence            9999877              67999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCC-CCeEEEEEe-ecccceeEEEccccCCC
Q 045789          147 SIPVIKQ-FKTRFVLIS-FNGSFLSSLYMASCFRA  179 (206)
Q Consensus       147 ~~~~~~~-~~~~~~~~~-~~gG~n~~~vl~~~~~~  179 (206)
                      .++|+.. ..++..+|+ +|||+|+|+||++++..
T Consensus       400 ~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~~  434 (915)
T 2qo3_A          400 NQPWRRGERTRRAAVSAFGISGTNAHVIVEEAPER  434 (915)
T ss_dssp             CEECCSSSSCCEEEEEEECTTSEEEEEEEEECCC-
T ss_pred             CcccccCCCCcEEEEeeecCCCceEEEEEeecccc
Confidence            9999753 344555555 59999999999998753

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=100.00  E-value=2e-38  Score=306.82  Aligned_cols=174  Identities=25%  Similarity=0.321  Sum_probs=158.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCC-CCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYH-ITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~   79 (206)
                      .|||++++|||++++|.    +||++|+|+++++||.+ ...+.|++.++.++|+++|++||++|+||+|||+|||||+.
T Consensus       226 ~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~  301 (965)
T 3hhd_A          226 RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKV  301 (965)
T ss_dssp             BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTT
T ss_pred             ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCC
Confidence            38999999999999986    59999999999999976 67788999999999999999999999999999999999999


Q ss_pred             CCHhhhhc------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCcccccc
Q 045789           80 GDLREYQA------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFI  146 (206)
Q Consensus        80 ~D~~E~~a------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~  146 (206)
                      ||++|..|            ++|+|+|+|+||+++|||+++++|++++|++++|||++|+++|||.++ +...++.++++
T Consensus       302 gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~  381 (965)
T 3hhd_A          302 GDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQ  381 (965)
T ss_dssp             HHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCS
T ss_pred             CCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCC
Confidence            99999988            679999999999999999999999999999999999999999999997 67778889999


Q ss_pred             cccccCCCCeEEEEEeecccceeEEEccccCCCC
Q 045789          147 SIPVIKQFKTRFVLISFNGSFLSSLYMASCFRAR  180 (206)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~~~~  180 (206)
                      .++|+..  ++.+++++|||+|+|+||++++...
T Consensus       382 ~~~~~~~--~a~v~sfG~gG~Nah~il~~~~~~~  413 (965)
T 3hhd_A          382 PLPVRGG--NVGINSFGFGGSNVHIILRPNTQPP  413 (965)
T ss_dssp             CEECCSC--EEEEEEECTTSEEEEEEEEECCCCC
T ss_pred             CccCCCC--eEEEecccCCCceEEEEeccCCccc
Confidence            9999753  4444445699999999999987543

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=100.00  E-value=7.4e-38  Score=280.31  Aligned_cols=171  Identities=43%  Similarity=0.548  Sum_probs=154.8

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|++||++|+|+++++|+.+.+.+++++.++.++|+++|+++|++|+||+|||+|+|||+.+
T Consensus       255 ~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~g  334 (438)
T 2iwz_A          255 MGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLG  334 (438)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH
T ss_pred             eeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCccc
Confidence            58999999999999999999999999999999999998877888899999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |++|..+           ++|+++|+++||+++|+|++++++++++|++++|||++|+++|||.++++.    ++.+.++
T Consensus       335 D~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~----v~~~~~~  410 (438)
T 2iwz_A          335 DAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNY----VPLKAQE  410 (438)
T ss_dssp             HHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBC----CBSSCEE
T ss_pred             CHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc----cCCCccc
Confidence            9999877           689999999999999999999999999999999999999999999998764    4456678


Q ss_pred             ccCCCCeEEEE-EeecccceeEEEccc
Q 045789          150 VIKQFKTRFVL-ISFNGSFLSSLYMAS  175 (206)
Q Consensus       150 ~~~~~~~~~~~-~~~~gG~n~~~vl~~  175 (206)
                      |+....++..+ +.+|||+|+|+||+.
T Consensus       411 ~~~~~~~~a~~~sfGfGG~na~~vl~~  437 (438)
T 2iwz_A          411 WKTEKRFIGLTNSFGFGGTNATLCIAG  437 (438)
T ss_dssp             CCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred             CCCCCccEEEEecCcCCCeeEEEEEee
Confidence            87433444444 446999999999985

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=3.5e-38  Score=326.81  Aligned_cols=173  Identities=24%  Similarity=0.302  Sum_probs=159.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCC-CCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYH-ITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~   79 (206)
                      .|||++++|||++++|.    +|||+|+|+++|+||.+ .+.+.|++.++.++|++||++||++|+||+|||+|||||+.
T Consensus       224 ~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~  299 (2512)
T 2vz8_A          224 RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKV  299 (2512)
T ss_dssp             BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTT
T ss_pred             eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCC
Confidence            48999999999999996    69999999999999964 67888999999999999999999999999999999999999


Q ss_pred             CCHhhhhc------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCcccccc
Q 045789           80 GDLREYQA------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFI  146 (206)
Q Consensus        80 ~D~~E~~a------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~  146 (206)
                      ||++|..|            ++|+|+|+|+||+++|||+++++|++++|++++|||++|+++|||.++ |...++.++++
T Consensus       300 gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~  379 (2512)
T 2vz8_A          300 GDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDR  379 (2512)
T ss_dssp             HHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCS
T ss_pred             CCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCC
Confidence            99999988            689999999999999999999999999999999999999999999997 88889999999


Q ss_pred             cccccCCCCeEEEEEeecccceeEEEccccCCC
Q 045789          147 SIPVIKQFKTRFVLISFNGSFLSSLYMASCFRA  179 (206)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~~~  179 (206)
                      .++|+.  .++.+++++|||+|+|+|+++++..
T Consensus       380 ~~~~~~--~~a~vnsfG~gG~Nah~il~~~~~~  410 (2512)
T 2vz8_A          380 PLPIRG--GNVGINSFGFGGSNVHVILQPNSRP  410 (2512)
T ss_dssp             CCBCCS--CCEEEEEEETTTEEEEEEEEECCCC
T ss_pred             CccCCC--CeEEEeccCCCCceeEEEEccCCcc
Confidence            999975  3455555569999999999998753

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=1.6e-37  Score=276.26  Aligned_cols=170  Identities=44%  Similarity=0.613  Sum_probs=154.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|++||++|+|+++++|+.+.+.++|++.++.++|+++|+++|++++||+|||+|+|||+.+
T Consensus       235 ~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~  314 (416)
T 1e5m_A          235 MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPAN  314 (416)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH
T ss_pred             eeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCc
Confidence            58999999999999999999999999999999999998888888899999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |++|..+           ++|++.|+++||+++|+|++++++++++|++++|||++|+++|||.++++.++    .+.++
T Consensus       315 D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~----~~~~~  390 (416)
T 1e5m_A          315 DVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP----GQSRA  390 (416)
T ss_dssp             HHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB----SSCEE
T ss_pred             CHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC----Ccccc
Confidence            9999887           68999999999999999999999999999999999999999999999876543    34455


Q ss_pred             ccCCCCeEEEEEeecccceeEEEcccc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      |.  .++.++++.+|||+|+|+|++++
T Consensus       391 ~~--~~~a~~~sfGfGG~n~~~vl~~~  415 (416)
T 1e5m_A          391 LI--VDVALSNSFGFGGHNVTLAFKKY  415 (416)
T ss_dssp             CC--CSEEEEEEEETTTEEEEEEEECC
T ss_pred             CC--CCEEEEccccCCCeeEEEEEEeC
Confidence            53  34555555569999999999864

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=100.00  E-value=2.3e-37  Score=276.20  Aligned_cols=170  Identities=39%  Similarity=0.588  Sum_probs=155.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|+++++|+.+.+.+.+++.++.++++++|+++|++++||||||+|||||+.+
T Consensus       246 ~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~  325 (427)
T 3ho9_A          246 LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAG  325 (427)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH
T ss_pred             eeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCc
Confidence            58999999999999999999999999999999999998888888999999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |..|..+           +++++.|+++||+++|||++++++++++|++++|||++|+++|||.++++.+    +.+.++
T Consensus       326 d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~----~~~~~~  401 (427)
T 3ho9_A          326 DKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFV----PHEARQ  401 (427)
T ss_dssp             HHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCC----BSSCEE
T ss_pred             CHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccc----cccccc
Confidence            9999988           6899999999999999999999999999999999999999999999987744    345566


Q ss_pred             ccCCCCeEEEEEeecccceeEEEccc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      |+ +.++.++++.+|||+|+|+||++
T Consensus       402 ~~-~~~~a~~~sfGfgG~na~~vl~~  426 (427)
T 3ho9_A          402 VS-GMEYTLCNSFGFGGTNGSLIFKK  426 (427)
T ss_dssp             CS-SCCEEEEEEEETTTEEEEEEEEC
T ss_pred             CC-CCCEEEEeCccCCceeEEEEEEe
Confidence            64 33555555666999999999986

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=100.00  E-value=2.2e-37  Score=275.10  Aligned_cols=168  Identities=35%  Similarity=0.458  Sum_probs=150.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|++||++|+|+++++|+.+.  +.|++.++.++|+++|+++|++++||+|||+|||||+.+
T Consensus       235 ~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~  312 (412)
T 4ewg_A          235 VGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHM--TQPTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRG  312 (412)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCS--SSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHH
T ss_pred             eECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccc
Confidence            489999999999999999999999999999999999864  456789999999999999999999999999999999999


Q ss_pred             CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCC-CCCCCCccccccccccc
Q 045789           81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHV-LSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  151 (206)
                      |++|..+        ++|++.|+++||+++|+|++++++++++|++++|||++|+++|||.+ +++.++    .+.++| 
T Consensus       313 D~~E~~al~~~~~~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~----~~~~~~-  387 (412)
T 4ewg_A          313 DVAESQATARTFGERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIR----GEARAI-  387 (412)
T ss_dssp             HHHHHHHHHHHHCTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECC----SSCEEC-
T ss_pred             cHHHHHHHHHHcCCCCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCccccccccc----CcccCC-
Confidence            9999888        78999999999999999999999999999999999999999999998 666433    333444 


Q ss_pred             CCCCeEEEEEeecccceeEEEcccc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                       +.++.++++.+|||+|+|+|++.+
T Consensus       388 -~~~~~~~~sfgfGG~na~~vl~~~  411 (412)
T 4ewg_A          388 -DAEYVMSNNFAFGGINTSLIFRRV  411 (412)
T ss_dssp             -CCSEEEEEEEEGGGEEEEEEEECC
T ss_pred             -CCCEEEEeeecCCcceEEEEEeeC
Confidence             345566666679999999999864

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=100.00  E-value=3e-37  Score=274.11  Aligned_cols=171  Identities=40%  Similarity=0.541  Sum_probs=154.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|++.++|+.+.+.+.|++.++.++++++|+++|++++||||||+|||||+.+
T Consensus       231 ~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~  310 (413)
T 3o04_A          231 IGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYN  310 (413)
T ss_dssp             BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHH
T ss_pred             EeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccc
Confidence            58999999999999999999999999999999999998888889999999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |++|..+           +++++.|+++||+++|+|++++++++++|++++|||++|+++|||.++++.++.    +.. 
T Consensus       311 d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~----~~~-  385 (413)
T 3o04_A          311 DEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPN----EAR-  385 (413)
T ss_dssp             HHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCBS----SCE-
T ss_pred             CHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCCC----ccc-
Confidence            9999988           789999999999999999999999999999999999999999999998876553    222 


Q ss_pred             ccCCCCeEEEEEeecccceeEEEccccC
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                       +.+.++.++++.+|||+|+|+|++++.
T Consensus       386 -~~~~~~~~~~sfgfgG~na~~vl~~~~  412 (413)
T 3o04_A          386 -EANVNVVISNSFGFGGHNATLVFKRIE  412 (413)
T ss_dssp             -ECCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred             -CCCCCEEEEeCccCCceEEEEEEEeCC
Confidence             233445555556699999999999763

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=1.5e-37  Score=276.95  Aligned_cols=171  Identities=32%  Similarity=0.451  Sum_probs=155.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|++||++|+|+++++|+.+.+.+.|++.++.++|+++|+++|++|+||+|||+|+|||+.+
T Consensus       237 ~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~g  316 (424)
T 1tqy_A          237 LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQN  316 (424)
T ss_dssp             EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHH
T ss_pred             eecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCc
Confidence            48999999999999999999999999999999999998888888889999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |++|..+           ++|+++|+++||+++|+|+++++|++++|+++++||++|+++|||.++++.++    .+.++
T Consensus       317 D~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~----~~~~~  392 (424)
T 1tqy_A          317 DRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVP----LEARE  392 (424)
T ss_dssp             HHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCB----SSCEE
T ss_pred             CHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCC----CcccC
Confidence            9999877           67999999999999999999999999999999999999999999999876554    34455


Q ss_pred             ccCCCCeEEEEEeecccceeEEEccccC
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      |+  .++.++++.+|||+|+|+|+++++
T Consensus       393 ~~--~~~a~~~sfG~GG~n~~~vl~~~~  418 (424)
T 1tqy_A          393 RK--LRSVLTVGSGFGGFQSAMVLRDAE  418 (424)
T ss_dssp             CC--CSEEEEEEEETTTEEEEEEEECHH
T ss_pred             CC--CCEEEEccccCCceEEEEEEccCC
Confidence            53  345556666799999999999864

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=100.00  E-value=3.6e-37  Score=275.76  Aligned_cols=170  Identities=40%  Similarity=0.575  Sum_probs=154.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|+++++|+.+.+.++|++.++.++|+++|+++|++|+||+|||+|+|||+.+
T Consensus       255 ~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~  334 (437)
T 2gqd_A          255 MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVG  334 (437)
T ss_dssp             BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH
T ss_pred             eeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCc
Confidence            58999999999999999999999999999999999998878888899999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |++|..+           ++|++.|+++||+++|+|++++++++++|+++++||++|+++|||.++++.++    .+.++
T Consensus       335 D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~----~~~~~  410 (437)
T 2gqd_A          335 DLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP----NEAQD  410 (437)
T ss_dssp             HHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCB----SSCEE
T ss_pred             CHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC----Ccccc
Confidence            9999887           68999999999999999999999999999999999999999999999876544    34455


Q ss_pred             ccCCCCeEEEEEeecccceeEEEcccc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      |+  .++.++++.+|||+|+|+||+++
T Consensus       411 ~~--~~~a~~~sfGfGG~na~~vl~~~  435 (437)
T 2gqd_A          411 LD--ITYAMSNSLGFGGHNAVLVFKKF  435 (437)
T ss_dssp             CC--CSEEEEEEECGGGEEEEEEEECC
T ss_pred             CC--CCEEEEccCcCCCeeEEEEEEec
Confidence            53  34555555569999999999875

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=4.4e-37  Score=273.24  Aligned_cols=168  Identities=22%  Similarity=0.273  Sum_probs=149.7

Q ss_pred             CCceEEEEEEccchHHHhcCC-ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGT-NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~   79 (206)
                      +|||++++||+++++|+++|+ ++|++|+|+++++|+.+.+.+++   ++.++|+++|+++|++++||+|||+|||||+.
T Consensus       235 ~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~  311 (415)
T 1tqy_B          235 PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVDVVFADGAGVPE  311 (415)
T ss_dssp             BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHH
T ss_pred             eeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcC
Confidence            589999999999999999999 99999999999999988555544   78999999999999999999999999999999


Q ss_pred             CCHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 045789           80 GDLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPV  150 (206)
Q Consensus        80 ~D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (206)
                      +|.+|..+         ++|++.|+++||+++|+|++++++++++|+++++||++|+++|||.++++.    ++.+.++|
T Consensus       312 ~D~~E~~al~~~~g~~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~----v~~~~~~~  387 (415)
T 1tqy_B          312 LDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDL----VLGEPRST  387 (415)
T ss_dssp             HHHHHHHHHHHHHCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEE----CBSSCBCC
T ss_pred             cCHHHHHHHHHHhCCCCceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc----cCCCCccC
Confidence            99999988         789999999999999999999999999999999999999999999987653    34445566


Q ss_pred             cCCCCeEEEEEeecccceeEEEccccC
Q 045789          151 IKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       151 ~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                        ..++.++++.+|||+|+|+||++++
T Consensus       388 --~~~~a~~~sfGfgG~n~~~vl~~~~  412 (415)
T 1tqy_B          388 --APRTALVLARGRWGFNSAAVLRRFA  412 (415)
T ss_dssp             --CCSEEEEEEEETTTEEEEEEEEEC-
T ss_pred             --CCCEEEEecCcCCCeEEEEEEecCC
Confidence              3345555555699999999999875

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=5.6e-37  Score=271.93  Aligned_cols=168  Identities=47%  Similarity=0.647  Sum_probs=153.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|+++++|+.+.+.+.+++.++.++|+++|+++|++++||+|||+|+|||+.+
T Consensus       229 ~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~g  308 (408)
T 1j3n_A          229 MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVG  308 (408)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH
T ss_pred             EeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccc
Confidence            48999999999999999999999999999999999998888888899999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |++|..+           +++++.|+++||+.+|||+++++|++++|++++|||++|+++|||.++++.++     +.++
T Consensus       309 D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~-----~~~~  383 (408)
T 1j3n_A          309 DRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP-----EPRE  383 (408)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS-----SCEE
T ss_pred             CHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC-----CCcC
Confidence            9999987           68999999999999999999999999999999999999999999999876544     3455


Q ss_pred             ccCCCCeEEEEEeecccceeEEEccc
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      |+  .++.++++.+|||+|+|+||++
T Consensus       384 ~~--~~~a~~~sfGfGG~na~~vl~~  407 (408)
T 1j3n_A          384 AK--VDYALSNSFAFGGHNAVLAFKR  407 (408)
T ss_dssp             CC--CSEEEEEEECTTSEEEEEEEEC
T ss_pred             CC--CCEEEEecccCCcceEEEEEec
Confidence            53  3455555556999999999985

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=100.00  E-value=9.1e-37  Score=274.16  Aligned_cols=173  Identities=39%  Similarity=0.490  Sum_probs=154.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|++.++|+.+.+.+.+++.++.++++++|+++|++++||||||+|+|||+.+
T Consensus       262 ~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~  341 (451)
T 4ddo_A          262 MGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVG  341 (451)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH
T ss_pred             EeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcCccc
Confidence            48999999999999999999999999999999999998888888899999999999999999999999999999999999


Q ss_pred             CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCC-CCCCCCccccccccc
Q 045789           81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHV-LSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~  149 (206)
                      |.+|..+          ++|++.|+++||+++|+|++++++++++|++++|||++|+++|||.+ +++.++    .+..+
T Consensus       342 d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~----~~~~~  417 (451)
T 4ddo_A          342 DAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIG----PAARH  417 (451)
T ss_dssp             HHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECC----SSCEE
T ss_pred             CHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccccC----CCCCC
Confidence            9999988          78999999999999999999999999999999999999999999988 555433    23333


Q ss_pred             ccCCCCeEEEEEeecccceeEEEccccCCC
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASCFRA  179 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~~~~  179 (206)
                      |  +.++.++++.+|||+|+|+||++++..
T Consensus       418 ~--~~~~a~~~sfgfgG~na~~vl~~~~~~  445 (451)
T 4ddo_A          418 V--PVEIALSNGFGFGGVNASVLFRRYPSD  445 (451)
T ss_dssp             C--CCSEEEEEEEETTTEEEEEEEEESCC-
T ss_pred             C--CcCEEEEeeEcCCCceEEEEEeeCCCC
Confidence            3  334555555669999999999998744

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=100.00  E-value=1.5e-36  Score=271.26  Aligned_cols=170  Identities=43%  Similarity=0.598  Sum_probs=153.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|+++++|+.+.+.+.+++.++.++|+++|+++|++++||+|||+|||||+.+
T Consensus       248 ~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~~  327 (431)
T 2ix4_A          248 IGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIG  327 (431)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH
T ss_pred             eecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccc
Confidence            48999999999999999999999999999999999998777777889999999999999999999999999999999999


Q ss_pred             CHhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccc
Q 045789           81 DLREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFIS  147 (206)
Q Consensus        81 D~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~  147 (206)
                      |.+|..+             +++++.|+++||+++|+|+++++|++++|++++|||++|+++|||.++++.++    .+.
T Consensus       328 D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~----~~~  403 (431)
T 2ix4_A          328 DAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMP----LTT  403 (431)
T ss_dssp             HHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCC----CSS
T ss_pred             CHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCC----ccc
Confidence            9999987             67999999999999999999999999999999999999999999999876544    345


Q ss_pred             ccccCCCCeEEEEEeecccceeEEEccc
Q 045789          148 IPVIKQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       148 ~~~~~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      ++|+ ..++.++++.+|||+|+|+||++
T Consensus       404 ~~~~-~~~~a~~~sfGfGG~na~~il~~  430 (431)
T 2ix4_A          404 SKKM-LVRTAMSNSFGFGGTNASLLFAS  430 (431)
T ss_dssp             CEEC-CCSEEEEEEEETTTEEEEEEEEC
T ss_pred             cccC-CCCEEEEecccCCCeeEEEEEee
Confidence            5664 33455555556999999999985

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=100.00  E-value=1.2e-36  Score=270.76  Aligned_cols=169  Identities=31%  Similarity=0.477  Sum_probs=151.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|+++++|+.+.+.+.+++.++.++|+++|+++|++++||||||+|||||+.+
T Consensus       239 ~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~g  318 (416)
T 2wge_A          239 FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIG  318 (416)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHH
T ss_pred             ccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCC
Confidence            48999999999999999999999999999999999988777777889999999999999999999999999999999999


Q ss_pred             CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccC
Q 045789           81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIK  152 (206)
Q Consensus        81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (206)
                      |++|..+        +++++.|+++||+++|+|++++++++++|++++|||++|+++|||.++++.++.    +.++  .
T Consensus       319 D~~E~~al~~~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~----~~~~--~  392 (416)
T 2wge_A          319 DAAEANAIRVAGCDQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAG----EPRY--G  392 (416)
T ss_dssp             HHHHHHHHHHTTCTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCS----SCEE--C
T ss_pred             CHHHHHHHHHhccCCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCC----CCcc--C
Confidence            9999987        688999999999999999999999999999999999999999999998765432    2222  2


Q ss_pred             CCCeEEEEEeecccceeEEEccc
Q 045789          153 QFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       153 ~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      ..++.++++.+|||+|+|+||++
T Consensus       393 ~~~~a~~~sfGfGG~na~~vl~~  415 (416)
T 2wge_A          393 DYRYAVNNSFGFGGHNVALAFGR  415 (416)
T ss_dssp             CCCEEEEEEEETTTEEEEEEEEC
T ss_pred             CCCEEEEeCcccCceeEEEEEEe
Confidence            33455555556999999999986

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=100.00  E-value=1.4e-36  Score=271.22  Aligned_cols=171  Identities=36%  Similarity=0.529  Sum_probs=153.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|++||++|+|+++++|+.+.+.+.+++.++.++|+++|+++|++++||||||+|+|||+.+
T Consensus       250 ~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~  329 (430)
T 1ox0_A          250 MGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPAN  329 (430)
T ss_dssp             BCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHH
T ss_pred             ccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCccc
Confidence            58999999999999999999999999999999999998777777889999999999999999999999999999999999


Q ss_pred             CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccC
Q 045789           81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIK  152 (206)
Q Consensus        81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (206)
                      |..|..+        ++|++.|+++||+++|+|++++++++++|++++|||++|+++|||.++++.++    .+.++|  
T Consensus       330 D~~E~~al~~~~g~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~----~~~~~~--  403 (430)
T 1ox0_A          330 EKGESGAIVAVLGKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY----GQGLEK--  403 (430)
T ss_dssp             HHHHHHHHHHHHCSSSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB----SSCEEC--
T ss_pred             CHHHHHHHHHHhCCCceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC----CCCcCC--
Confidence            9999877        78999999999999999999999999999999999999999999998776433    333343  


Q ss_pred             CCCeEEEEEeecccceeEEEccccC
Q 045789          153 QFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       153 ~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      ..++.++++.+|||+|+|+||+++.
T Consensus       404 ~~~~a~~~sfGfGG~na~~vl~~~~  428 (430)
T 1ox0_A          404 EIPYAISNTFGFGGHNAVLAFKRWE  428 (430)
T ss_dssp             CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred             CCCEEEEeCccCCCceEEEEEeecC
Confidence            3345555666699999999999864

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=100.00  E-value=2.1e-36  Score=270.07  Aligned_cols=166  Identities=36%  Similarity=0.496  Sum_probs=145.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|++||++|+|+++++|+.+.  +.|++.++.++|+++|+  |++ +||||||+|||||+.+
T Consensus       250 ~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~--~~P~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~~  324 (428)
T 3mqd_A          250 IAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDM--VAPSGEGAIRCMKMALS--TVT-SKIDYINPHATSTPAG  324 (428)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCS--SSCCSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHHH
T ss_pred             cccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCC--CCCCHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCCc
Confidence            589999999999999999999999999999999999864  45688999999999999  999 9999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCcccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFISI  148 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~  148 (206)
                      |++|..+           ++|++.|+++||+++|||+++++|++++|++++|||++|+++|||.++ ++..+     +..
T Consensus       325 D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~-----~~~  399 (428)
T 3mqd_A          325 DAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVR-----KRI  399 (428)
T ss_dssp             HHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCS-----SCE
T ss_pred             CHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccC-----Ccc
Confidence            9999988           679999999999999999999999999999999999999999999875 44322     223


Q ss_pred             cccCCCCeEEEEEeecccceeEEEccccC
Q 045789          149 PVIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       149 ~~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      +| ...++.++++++|||+|+|+|+++++
T Consensus       400 ~~-~~~~~~~~~sfGfGG~Na~~vl~~~~  427 (428)
T 3mqd_A          400 DN-VQLNTVLSNSFGFGGTNATLVFQRYQ  427 (428)
T ss_dssp             ES-CCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred             cc-CCCCEEEEecCcCCcceEEEEEeecC
Confidence            33 23344555555699999999999864

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=100.00  E-value=4.5e-36  Score=268.03  Aligned_cols=170  Identities=42%  Similarity=0.589  Sum_probs=153.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|++||++|+|+++++|+.+.+.+.+++.++.++++++|+++|++++||||||+||||| .+
T Consensus       247 ~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT-~~  325 (428)
T 3kzu_A          247 MGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST-MA  325 (428)
T ss_dssp             BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS-TT
T ss_pred             ecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc-hh
Confidence            48999999999999999999999999999999999998888888899999999999999999999999999999999 99


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |..|..+           +++++.|+++||+++|+|++++++++++|++++|||++|+++|||.++++.++.    +..+
T Consensus       326 d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~----~~~~  401 (428)
T 3kzu_A          326 DTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPH----KPRE  401 (428)
T ss_dssp             HHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCBS----SCEE
T ss_pred             hHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCCC----CCcC
Confidence            9999888           789999999999999999999999999999999999999999999998776553    2233


Q ss_pred             ccCCCCeEEEEEeecccceeEEEccccC
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      |  +.++.++++.+|||+|+|+||++++
T Consensus       402 ~--~~~~a~~~sfGfgG~na~~vl~~~~  427 (428)
T 3kzu_A          402 R--KIDVALSNSFGFGGTNASLVLRRYT  427 (428)
T ss_dssp             C--CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred             C--CCCEEEEeCcccChhhEEEEEeecC
Confidence            3  3345555556699999999999764

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-35  Score=265.98  Aligned_cols=169  Identities=34%  Similarity=0.498  Sum_probs=152.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++||+++++|+++|+++|++|+|+++++|+.+.+.+++++.++.++|+++|+++|++++||+|||+|++||+.+
T Consensus       256 ~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~  335 (434)
T 2gp6_A          256 FGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVG  335 (434)
T ss_dssp             BBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHH
T ss_pred             eecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccc
Confidence            48999999999999999999999999999999999998777777889999999999999999999999999999999999


Q ss_pred             CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789           81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (206)
                      |.+|..+         +++++.|+++||+++|+|++++++++++|+++++||++|+++|||.++++.++    .+.++| 
T Consensus       336 D~~E~~al~~~fg~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~----~~~~~~-  410 (434)
T 2gp6_A          336 DLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVA----GEPRPG-  410 (434)
T ss_dssp             HHHHHHHHHHHHTTCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECC----SSCCCS-
T ss_pred             hHHHHHHHHHHhccCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC----CCccCC-
Confidence            9999987         67999999999999999999999999999999999999999999999876543    333444 


Q ss_pred             CCCCeEEEEEeecccceeEEEccc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                       ..++.++++.+|||+|+|+||++
T Consensus       411 -~~~~a~~~sfGfGG~na~~vl~~  433 (434)
T 2gp6_A          411 -NYRYAINNSFGFGGHNVAIAFGR  433 (434)
T ss_dssp             -CCCEEEEEEEETTTEEEEEEEEC
T ss_pred             -CCCEEEEeCCcCCCeeEEEEEEe
Confidence             33455555556999999999986

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=100.00  E-value=1.7e-35  Score=262.61  Aligned_cols=165  Identities=32%  Similarity=0.514  Sum_probs=144.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|+|+++++|+.+.  +.|++.++.++|+++|+++|   +||+|||+|||||+.+
T Consensus       231 ~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~--t~p~~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~g  305 (406)
T 2vba_A          231 IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADM--VAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVG  305 (406)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCT--TSCCSHHHHHHHHHHHTTCC---SCCCEEECCCCSCHHH
T ss_pred             eeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCC--CCCCHHHHHHHHHHHHhhCC---CCccEEEeeCccCccc
Confidence            589999999999999999999999999999999999864  45668999999999999999   8999999999999999


Q ss_pred             CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCcccccccccc
Q 045789           81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFISIPV  150 (206)
Q Consensus        81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~~~  150 (206)
                      |++|..+         ++|+++|+++||+++|+|+++++|++++|+++++||++|+++|||.++ ++.++.    ...  
T Consensus       306 D~~E~~al~~~fg~~~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~----~~~--  379 (406)
T 2vba_A          306 DVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTE----TTD--  379 (406)
T ss_dssp             HHHHHHHHHHHHTTCCCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCS----CEE--
T ss_pred             CHHHHHHHHHHhCcCCCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCCc----ccC--
Confidence            9999887         679999999999999999999999999999999999999999999987 554332    111  


Q ss_pred             cCCCCeEEEEEeecccceeEEEccccC
Q 045789          151 IKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       151 ~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      + ..++.++++.+|||+|+|+|++++.
T Consensus       380 ~-~~~~a~~~sfGfgG~na~~vl~~~~  405 (406)
T 2vba_A          380 R-ELTTVMSNSFGFGGTNATLVMRKLK  405 (406)
T ss_dssp             C-CCCEEEEEEEETTTEEEEEEEECC-
T ss_pred             C-CCCEEEEcCCCCCCeEEEEEEEeCC
Confidence            1 3344555555699999999999753

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=100.00  E-value=2.9e-35  Score=305.95  Aligned_cols=178  Identities=22%  Similarity=0.233  Sum_probs=160.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCCh-------HHHHHHHHHHHHHcCCCcccccccccc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEG-------VGMVSCMEKALAKSGVAKEDVNYINAH   73 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~-------~~~~~~~~~al~~Agi~~~dI~~ve~h   73 (206)
                      +|||++++||+++++|+++|++||++|.++++++||.+.+.+.|+.       .++.++|+++|+++|++++||+|||+|
T Consensus      2813 ~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaH 2892 (3089)
T 3zen_D         2813 EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIAVISKH 2892 (3089)
T ss_dssp             BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECC
T ss_pred             EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEe
Confidence            4899999999999999999999999999999999999888888862       367789999999999999999999999


Q ss_pred             CCCCCcCCHhhhh---c------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCC
Q 045789           74 APSTRLGDLREYQ---A------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRT  138 (206)
Q Consensus        74 gtgt~~~D~~E~~---a------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~  138 (206)
                      ||||++||++|..   +            ++|+++|+++||+++|||+++++|++++|++++|||++|++++||.++ ..
T Consensus      2893 GTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~-~~ 2971 (3089)
T 3zen_D         2893 DTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELA-TS 2971 (3089)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGG-GC
T ss_pred             cCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCcc-cc
Confidence            9999999999998   2            779999999999999999999999999999999999999999999998 77


Q ss_pred             CCcccccccccccCC-CCeEEEEEe-ecccceeEEEccccCCC
Q 045789          139 SGASAAFISIPVIKQ-FKTRFVLIS-FNGSFLSSLYMASCFRA  179 (206)
Q Consensus       139 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~gG~n~~~vl~~~~~~  179 (206)
                      .++.++++..+|+.. ..+++.+|+ +|||+|+|+|+++++..
T Consensus      2972 ~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~~ 3014 (3089)
T 3zen_D         2972 GHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEAF 3014 (3089)
T ss_dssp             SSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGGT
T ss_pred             CCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCchh
Confidence            889999999999653 234444544 59999999999997743

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-34  Score=281.82  Aligned_cols=178  Identities=21%  Similarity=0.169  Sum_probs=150.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCC------------------hH---------------
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPE------------------GV---------------   47 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~------------------~~---------------   47 (206)
                      +|||++++||+++++|+++|++||++|.|+++++|+.+.+.++|.                  +.               
T Consensus      1179 ~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~ 1258 (1688)
T 2pff_A         1179 EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREA 1258 (1688)
T ss_dssp             CCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHH
T ss_pred             cccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999865544441                  11               


Q ss_pred             ----------------------------HH-------------------------------HHHHHHHHHHcCCCccccc
Q 045789           48 ----------------------------GM-------------------------------VSCMEKALAKSGVAKEDVN   68 (206)
Q Consensus        48 ----------------------------~~-------------------------------~~~~~~al~~Agi~~~dI~   68 (206)
                                                  +|                               .++|++||+++|++++||+
T Consensus      1259 ~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDId 1338 (1688)
T 2pff_A         1259 QIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1338 (1688)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCC
T ss_pred             HHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHee
Confidence                                        22                               4789999999999999999


Q ss_pred             cccccCCCCCcCCHhhhhc---------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCC
Q 045789           69 YINAHAPSTRLGDLREYQA---------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKH  133 (206)
Q Consensus        69 ~ve~hgtgt~~~D~~E~~a---------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~  133 (206)
                      |||+|||||++||++|..+               ++++++|+++||+++|||++++++++++|++|+|||+.|+++|||.
T Consensus      1339 yVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~ 1418 (1688)
T 2pff_A         1339 VASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKI 1418 (1688)
T ss_dssp             CCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTT
T ss_pred             EEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Confidence            9999999999999999988               5689999999999999999999999999999999999999999999


Q ss_pred             CC-CCCCCcccccccccccCCCCeEEEEEeecccceeEEEccccCCCCC
Q 045789          134 VL-SRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCFRARP  181 (206)
Q Consensus       134 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~~~~~  181 (206)
                      ++ ++  .+.++.+..+|+ ..+++.+++.+|||+|+|+|++.++....
T Consensus      1419 l~~~d--~v~~p~~~~~~~-~~r~AlVnSFGFGGtNAhvILe~p~~~~a 1464 (1688)
T 2pff_A         1419 LEQFE--YVLYPSKTLKTD-GVRAVSITSFGFGQKGGQAIVVHPDYLYG 1464 (1688)
T ss_dssp             CCSSC--CCCSCTTCCSSS-SSSCCCCCCCCSTTCCCCCCEECSSSCCC
T ss_pred             CCcCC--ceeecCccccCC-CCcEEEEeeECCCCeeEEEEEeCCCchhc
Confidence            85 43  334466777774 22334444445999999999999874433

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=2.2e-33  Score=281.67  Aligned_cols=174  Identities=21%  Similarity=0.185  Sum_probs=150.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCC------------------hH---------------
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPE------------------GV---------------   47 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~------------------~~---------------   47 (206)
                      +|||++++||+++++|+++|++||++|+|+++++|+.+.+.++|.                  +.               
T Consensus      1378 ~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~ 1457 (1887)
T 2uv8_A         1378 EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREA 1457 (1887)
T ss_dssp             BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHH
T ss_pred             cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999876655553                  11               


Q ss_pred             ----------------------------HH-------------------------------HHHHHHHHHHcCCCccccc
Q 045789           48 ----------------------------GM-------------------------------VSCMEKALAKSGVAKEDVN   68 (206)
Q Consensus        48 ----------------------------~~-------------------------------~~~~~~al~~Agi~~~dI~   68 (206)
                                                  +|                               .++|++||+++|++++||+
T Consensus      1458 ~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId 1537 (1887)
T 2uv8_A         1458 QIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1537 (1887)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEE
T ss_pred             HHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHce
Confidence                                        23                               3699999999999999999


Q ss_pred             cccccCCCCCcCCHhhhhc---------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCC
Q 045789           69 YINAHAPSTRLGDLREYQA---------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKH  133 (206)
Q Consensus        69 ~ve~hgtgt~~~D~~E~~a---------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~  133 (206)
                      |||+|||||+.||++|..+               ++++++|+++||+++|+|++++++++++|++|+|||+.|+++|||.
T Consensus      1538 ~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~ 1617 (1887)
T 2uv8_A         1538 VASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKI 1617 (1887)
T ss_dssp             EEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGG
T ss_pred             EEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCc
Confidence            9999999999999999988               6789999999999999999999999999999999999999999999


Q ss_pred             CC-CCCCCcccccccccccCCCCeEEEEEeecccceeEEEccccC
Q 045789          134 VL-SRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       134 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      ++ ++  .+.++.+..+|. ..++..+++++|||+|+|+|++.++
T Consensus      1618 l~~~~--~l~~~~~~~~~~-~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A         1618 LEQFE--YVLYPSKTLKTD-GVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp             GGGCT--TEECCSSCEECS-CCCEEEEEEEETTTEEEEEEEECTH
T ss_pred             ccccc--ccccccccccCC-CCCEEEEccCCCCCccEEEEEecCC
Confidence            85 44  344567777882 3344444445699999999999876

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=2e-33  Score=281.54  Aligned_cols=174  Identities=24%  Similarity=0.144  Sum_probs=148.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCC----------------h------------------
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPE----------------G------------------   46 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~----------------~------------------   46 (206)
                      +|||++++||+++++|+++|++||++|.|+++++|+.+.+.++|.                +                  
T Consensus      1353 ~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i 1432 (1878)
T 2uv9_A         1353 ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQI 1432 (1878)
T ss_dssp             BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHH
T ss_pred             ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999876666661                0                  


Q ss_pred             ---------------------------------HHHH-------------------------------HHHHHHHHHcCC
Q 045789           47 ---------------------------------VGMV-------------------------------SCMEKALAKSGV   62 (206)
Q Consensus        47 ---------------------------------~~~~-------------------------------~~~~~al~~Agi   62 (206)
                                                       .+|+                               ++|++||+.+|+
T Consensus      1433 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl 1512 (1878)
T 2uv9_A         1433 KQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGL 1512 (1878)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTC
T ss_pred             HHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCC
Confidence                                             1233                               799999999999


Q ss_pred             CccccccccccCCCCCcCCHhhhhc---------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCC
Q 045789           63 AKEDVNYINAHAPSTRLGDLREYQA---------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNL  127 (206)
Q Consensus        63 ~~~dI~~ve~hgtgt~~~D~~E~~a---------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~  127 (206)
                      +++||+|||+|||||+.||++|..+               ++++++|+++||+++|+|++++++++++|++|+|||+.|+
T Consensus      1513 ~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~ 1592 (1878)
T 2uv9_A         1513 TIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNA 1592 (1878)
T ss_dssp             CGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTC
T ss_pred             CHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCC
Confidence            9999999999999999999999988               6799999999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCcccccccccccCCCCeEEEEEeecccceeEEEccccC
Q 045789          128 ENPDKHVL-SRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       128 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      ++|||.++ ++.  +.++.+..+|. ..++..++++||||+|+|+|++.++
T Consensus      1593 d~~dp~i~~~~~--v~~~~~~~~~~-~~r~a~v~SFGFGG~NahvIle~p~ 1640 (1878)
T 2uv9_A         1593 DNVDKVMEQFDY--IVYPSRSIKTD-GIKAFSVTSFGFGQKGAQAIGVHPK 1640 (1878)
T ss_dssp             CSBCGGGGGCTT--EECCSSCEECS-CCCEEEEEEEETTTEEEEEEEECTH
T ss_pred             CCCCCccccccc--cccccccccCC-CCCEEEEccCCCCCeeEEEEEecCC
Confidence            99999984 444  22345555552 2334444444599999999999876

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.78  E-value=3.2e-19  Score=157.67  Aligned_cols=136  Identities=21%  Similarity=0.259  Sum_probs=110.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|+++|++|+|++.+++...     ..+.++.++++++|+++|++++||||||+|++++.. 
T Consensus       255 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~a~~~al~~Agl~~~dId~ie~heafa~~-  328 (401)
T 1ulq_A          255 LNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPR-----IMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQ-  328 (401)
T ss_dssp             CEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGG-----GGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHH-
T ss_pred             ccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCcc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEEecchHHH-
Confidence            48999999999999999999999999999999887432     224567899999999999999999999999988842 


Q ss_pred             CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789           81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (206)
                      .....+.         +++.+.+..+||+.+|+|+..+++++++|+++                                
T Consensus       329 ~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~--------------------------------  376 (401)
T 1ulq_A          329 ALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR--------------------------------  376 (401)
T ss_dssp             HHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--------------------------------
T ss_pred             HHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc--------------------------------
Confidence            2211111         44555566699999999999999999999986                                


Q ss_pred             CCCCeEEEEEeecccceeEEEccc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                       +.++.+..+.++||.|+++|++.
T Consensus       377 -~~~~gl~~~~~ggG~~~a~v~~~  399 (401)
T 1ulq_A          377 -KVQFGLATMCIGVGQGIAVVVEG  399 (401)
T ss_dssp             -TCSEEEEEEEETTTEEEEEEEEE
T ss_pred             -CCCEEEEEeecCCcccEEEEEEe
Confidence             12345555567999999999985

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.78  E-value=5.4e-19  Score=158.29  Aligned_cols=137  Identities=17%  Similarity=0.239  Sum_probs=111.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|++++++|+|++.+++.     +...+.++..+++++|+++|++++||||||+|+++|.  
T Consensus       274 ~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DId~iE~h~aft~--  346 (442)
T 2wu9_A          274 VSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVD-----PAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFAS--  346 (442)
T ss_dssp             CEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHTTCCGGGCCEEEECCSBHH--
T ss_pred             CCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCC-----chhcchHHHHHHHHHHHHcCCCHHHCCEEEEeCCChH--
Confidence            489999999999999999999999999999998773     2233567889999999999999999999999999996  


Q ss_pred             CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 045789           81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPV  150 (206)
Q Consensus        81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (206)
                        .|+.+          +++.+.+..+||+.+|+|+..+++++++|+++.  +                           
T Consensus       347 --~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~--~---------------------------  395 (442)
T 2wu9_A          347 --QFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG--K---------------------------  395 (442)
T ss_dssp             --HHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC--T---------------------------
T ss_pred             --HHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC--C---------------------------
Confidence              34333          344444446999999999999999999999873  0                           


Q ss_pred             cCCCCeEEEEEeecccceeEEEccccC
Q 045789          151 IKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       151 ~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                        +.++.++.+.+.||.|+++|++...
T Consensus       396 --~~~~glas~~~GGG~~~a~v~~~~~  420 (442)
T 2wu9_A          396 --DCRFGVVSMCIGTGMGAAAVFERGD  420 (442)
T ss_dssp             --TCCEEEEEEEETTTEEEEEEEEECS
T ss_pred             --CCCEEEEEeecccchheEEEEEecc
Confidence              1234554444558999999998653

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=99.76  E-value=1.1e-18  Score=153.76  Aligned_cols=137  Identities=17%  Similarity=0.210  Sum_probs=111.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|+++|++|+|++.+++.     +.+.+.++.++++++|+++|++++||||||+|++++...
T Consensus       244 ~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~~~  318 (390)
T 1wdk_C          244 ITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVD-----PAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQA  318 (390)
T ss_dssp             CEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHH
T ss_pred             ccchhheeEEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCHHHH
Confidence            589999999999999999999999999999998753     234456779999999999999999999999999987521


Q ss_pred             CH-hhhh------c--ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789           81 DL-REYQ------A--LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI  151 (206)
Q Consensus        81 D~-~E~~------a--~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (206)
                      -. .|..      .  +++++.|.++||+.+|+|+..+++++++|+++                                
T Consensus       319 ~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~--------------------------------  366 (390)
T 1wdk_C          319 LPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN--------------------------------  366 (390)
T ss_dssp             HHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--------------------------------
T ss_pred             HHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc--------------------------------
Confidence            11 0110      1  57889999999999999999999999999975                                


Q ss_pred             CCCCeEEEEEeecccceeEEEccc
Q 045789          152 KQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       152 ~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                       +.++.++.....||.+.++|++.
T Consensus       367 -~~~~gl~~~~~ggG~~~a~~~~~  389 (390)
T 1wdk_C          367 -GGTFGLSTMCIGLGQGIATVFER  389 (390)
T ss_dssp             -TCSEEEEEEEETTTEEEEEEEEC
T ss_pred             -CCCEEEEEecccchheEEEEEEe
Confidence             01234455556788999998874

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.76  E-value=1.2e-18  Score=153.94  Aligned_cols=136  Identities=22%  Similarity=0.305  Sum_probs=110.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||+++++|+++|++++++|+|++.+++.     +.+.+.++.++++++|+++|++++||||||+|.+++...
T Consensus       254 ~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~~~  328 (396)
T 4dd5_A          254 INDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVD-----PKIMGYGPVPATKKALEAANMTIEDIDLVEANEAFAAQS  328 (396)
T ss_dssp             CEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHH
T ss_pred             cCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCC-----CCcccHHHHHHHHHHHHHcCCCHHHcCEEEecChHHHHH
Confidence            479999999999999999999999999999998752     344466789999999999999999999999987754311


Q ss_pred             CHh-hhhc-----ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCC
Q 045789           81 DLR-EYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQF  154 (206)
Q Consensus        81 D~~-E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (206)
                      -.. |...     +++++.|.++||+.+|+|+..+++++++|+++                                 ..
T Consensus       329 ~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------------------~~  375 (396)
T 4dd5_A          329 VAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR---------------------------------DA  375 (396)
T ss_dssp             HHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------------------------TC
T ss_pred             HHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc---------------------------------CC
Confidence            110 1111     67899999999999999999999999999985                                 11


Q ss_pred             CeEEEEEeecccceeEEEcc
Q 045789          155 KTRFVLISFNGSFLSSLYMA  174 (206)
Q Consensus       155 ~~~~~~~~~~gG~n~~~vl~  174 (206)
                      ++.++..-..||...++|++
T Consensus       376 ~~gl~~~c~ggG~g~a~~~e  395 (396)
T 4dd5_A          376 KTGLATLCIGGGMGTTLIVK  395 (396)
T ss_dssp             SEEEEEEEETTTEEEEEEEE
T ss_pred             CeEEEEEcccCCceeEEEEe
Confidence            23445555688999999886

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.75  E-value=2e-18  Score=152.04  Aligned_cols=137  Identities=20%  Similarity=0.290  Sum_probs=108.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|+++|++|+|++.+++.     +.+.+.++.++++++|+++|++++||||||.|...+...
T Consensus       249 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~agl~~~dId~ie~~d~f~~~~  323 (392)
T 2vu1_A          249 LNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVD-----PKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQA  323 (392)
T ss_dssp             CEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHH
T ss_pred             ccChhheeeEecHHHHHhcCCCccEEEEEEEEeecC-----hhhcchhHHHHHHHHHHHcCCCHHHcCEEEeccccHHHH
Confidence            589999999999999999999999999999988642     234456789999999999999999999999885544321


Q ss_pred             CH-hhhhc-----ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCC
Q 045789           81 DL-REYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQF  154 (206)
Q Consensus        81 D~-~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (206)
                      -. .|...     +++++.|.++||+.+|+|+..+++++++|+++                                 ..
T Consensus       324 l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~---------------------------------~~  370 (392)
T 2vu1_A          324 CAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR---------------------------------GA  370 (392)
T ss_dssp             HHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH---------------------------------TC
T ss_pred             HHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc---------------------------------CC
Confidence            10 11111     67899999999999999999999999999885                                 11


Q ss_pred             CeEEEEEeecccceeEEEccc
Q 045789          155 KTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       155 ~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      ++.++.....||.+.++|++.
T Consensus       371 ~~gl~~~~~ggG~~~a~~~e~  391 (392)
T 2vu1_A          371 RKGLATLCIGGGMGVAMCIES  391 (392)
T ss_dssp             SEEEEEEEETTTEEEEEEEEC
T ss_pred             CEEEEEEecccchheEEEEEe
Confidence            234444445689999999874

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=99.75  E-value=2.2e-18  Score=152.11  Aligned_cols=137  Identities=20%  Similarity=0.311  Sum_probs=109.8

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|+++|++|+|++.+++.     +.+.+.++.++++++|+++|++++||||||.|.+.+...
T Consensus       254 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~d~f~~~~  328 (397)
T 1wl4_A          254 INDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVE-----PSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVS  328 (397)
T ss_dssp             CEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHH
T ss_pred             ccchhheeeEecHHHHHHcCCCccEEEEEEEEeecC-----hhhccchHHHHHHHHHHHcCCCHHHCCEEEEecccHHHH
Confidence            589999999999999999999999999999988642     334566789999999999999999999999876654311


Q ss_pred             CH-hhhhc-----ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCC
Q 045789           81 DL-REYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQF  154 (206)
Q Consensus        81 D~-~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (206)
                      -. .|...     +++++.|.++||+.+|+|+..+++++++|+++                                 +.
T Consensus       329 l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~---------------------------------~~  375 (397)
T 1wl4_A          329 AAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM---------------------------------GR  375 (397)
T ss_dssp             HHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------------------------TC
T ss_pred             HHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc---------------------------------CC
Confidence            00 01111     77899999999999999999999999999885                                 01


Q ss_pred             CeEEEEEeecccceeEEEccc
Q 045789          155 KTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       155 ~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      ++.++.....||.+.++|++.
T Consensus       376 ~~gl~~~~~ggG~~~a~~~e~  396 (397)
T 1wl4_A          376 SRGVAALCIGGGMGIAMCVQR  396 (397)
T ss_dssp             CEEEEEEEETTTEEEEEEEEE
T ss_pred             CEEEEEEecccchheEEEEEe
Confidence            234455556788899999875

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=99.72  E-value=3.8e-19  Score=162.22  Aligned_cols=172  Identities=10%  Similarity=0.009  Sum_probs=134.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCC---ChHHHHHHHHHHHHHcCCCccccccccccCCCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHP---EGVGMVSCMEKALAKSGVAKEDVNYINAHAPST   77 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~---~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt   77 (206)
                      ++||++++||.+++.|++.|.+++++|.+++............+   ...++..+++++|+++|++++|||++|+|.+++
T Consensus       268 isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~  347 (520)
T 4egv_A          268 QVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFP  347 (520)
T ss_dssp             CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSS
T ss_pred             CCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcH
Confidence            47999999999999999999999998888876544332211112   257889999999999999999999999998766


Q ss_pred             CcCCHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccc
Q 045789           78 RLGDLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFIS  147 (206)
Q Consensus        78 ~~~D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~  147 (206)
                      ... ...+..          +++++.+.++||+.+++|+..++|++.+|+++..+..++  .+|+.++|....+.+.+++
T Consensus       348 ~~~-l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~~~~~l~~~~  424 (520)
T 4egv_A          348 FPV-FNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKYSVGIYSTEP  424 (520)
T ss_dssp             HHH-HHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEEEEEEEESSC
T ss_pred             HHH-HHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeeeeEEEEcCCC
Confidence            421 111111          567777778999999999999999999999997776554  6899999999999999999


Q ss_pred             ccccCCCCeEEEEEeecccceeEEEccccCC
Q 045789          148 IPVIKQFKTRFVLISFNGSFLSSLYMASCFR  178 (206)
Q Consensus       148 ~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~~  178 (206)
                      .+|+...+.+..   +...+|+|+++++.+.
T Consensus       425 ~~w~~~~~~~~~---~~~~~~~~~~~~~~~~  452 (520)
T 4egv_A          425 ADWVADNSAQLQ---AEHDAQPKVAITEKAD  452 (520)
T ss_dssp             CCCCCCCHHHHH---HHHHTSCCCCBCSSCC
T ss_pred             CCCCCCCCCccc---ccccCCCCcccccCCC
Confidence            999987643322   2223899999988763

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.71  E-value=1.4e-17  Score=148.03  Aligned_cols=112  Identities=21%  Similarity=0.333  Sum_probs=96.8

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|++|+++|.|++.+.+.     +...+.++..+++++|+++|++++||||||+|++++ ..
T Consensus       272 ~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~-~~  345 (418)
T 2iik_A          272 VSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVP-----PDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFA-SQ  345 (418)
T ss_dssp             CEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBH-HH
T ss_pred             CCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCC-----chhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccch-HH
Confidence            589999999999999999999999999999887532     233456788999999999999999999999998665 68


Q ss_pred             CHhhhhc-----ceecccc--ccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-----LRMNSTK--SLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-----~~v~s~k--~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      |..|..+     .++...+  ..+||+.+|+|+..+++++++|++
T Consensus       346 ~~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~  390 (418)
T 2iik_A          346 AAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKR  390 (418)
T ss_dssp             HHHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHh
Confidence            9998887     3455555  468999999999999999999986

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.71  E-value=1.4e-17  Score=146.73  Aligned_cols=114  Identities=27%  Similarity=0.351  Sum_probs=94.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|++++++|.|++++++.     +.+.+.++.++++++|+++|++++||||||+|...+...
T Consensus       253 ~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~al~~agl~~~dId~ve~~d~fa~~~  327 (395)
T 4e1l_A          253 INDGAAMLILMSQQKADELGIRPLAKIKSYASAGVE-----PEVMGTGPIPATRKALKKAGLSINDIDLIEANEAFAAQA  327 (395)
T ss_dssp             CEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGTTCTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHH
T ss_pred             ccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCC-----CCcchHHHHHHHHHHHHHcCCCHHHcCEEEecChhHHHH
Confidence            479999999999999999999999999999998753     233345678999999999999999999999886644311


Q ss_pred             CHh-hhhc-----ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789           81 DLR-EYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        81 D~~-E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      ... |...     +++++.|.++||+.+|+|+..+++++++|+++
T Consensus       328 ~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~  372 (395)
T 4e1l_A          328 LAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR  372 (395)
T ss_dssp             HHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc
Confidence            111 1100     67899999999999999999999999999985

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.71  E-value=6.9e-18  Score=148.90  Aligned_cols=110  Identities=16%  Similarity=0.277  Sum_probs=94.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|+++|++|+|++.++|..     ...+.++.++++++|+++|++++||||||+|++++.  
T Consensus       252 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~ve~h~~ft~--  324 (393)
T 1afw_A          252 VSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPP-----EIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA--  324 (393)
T ss_dssp             BEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCG-----GGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH--
T ss_pred             ccchhheeeEecHHHHHHcCCCccEEEEEEEEeccCh-----hhcchhHHHHHHHHHHHcCCCHHHCCEEEEeccCHH--
Confidence            4899999999999999999999999999999988742     333567899999999999999999999999999995  


Q ss_pred             CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789           81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                        .|..+          +++.+.+..+||+.+|+|+..+++++++|+++
T Consensus       325 --~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~  371 (393)
T 1afw_A          325 --QALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD  371 (393)
T ss_dssp             --HHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT
T ss_pred             --HHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhc
Confidence              33332          44455555699999999999999999999875

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.71  E-value=1.7e-17  Score=146.22  Aligned_cols=109  Identities=27%  Similarity=0.426  Sum_probs=94.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||+++++|+++|++++++|+|+++++.     .+.+.+.++.++++++|+++|++++||||||+|.+.+.  
T Consensus       251 ~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~dId~ve~~d~fa~--  323 (394)
T 3ss6_A          251 LNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLEDADLLEINEAFAA--  323 (394)
T ss_dssp             CEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH--
T ss_pred             cccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHHcCEEEeCCchHH--
Confidence            47999999999999999999999999999999763     23444567899999999999999999999999876543  


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                         |..+           +++++.|.++||+.+|+|+..+++++++|+++
T Consensus       324 ---~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~  370 (394)
T 3ss6_A          324 ---QYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR  370 (394)
T ss_dssp             ---HHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc
Confidence               3322           67899999999999999999999999999884

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.71  E-value=2.6e-17  Score=144.90  Aligned_cols=112  Identities=21%  Similarity=0.268  Sum_probs=94.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|++++++|+|++.++++..     +.+.+..++++++|+++|++|+||||||+|++++...
T Consensus       241 ~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~~~  315 (387)
T 3goa_A          241 LSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPS-----IMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQI  315 (387)
T ss_dssp             CEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTT-----STTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHH
T ss_pred             cCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCC-----cchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchHHH
Confidence            47999999999999999999999999999999988543     2334568999999999999999999999999988531


Q ss_pred             CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      - .....          +++.+.+..+||+.+|+|+..+++++++|++
T Consensus       316 ~-~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~  362 (387)
T 3goa_A          316 L-PCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMER  362 (387)
T ss_dssp             H-HHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHh
Confidence            1 11111          4566667779999999999999999999996

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.67  E-value=3.5e-17  Score=144.16  Aligned_cols=106  Identities=22%  Similarity=0.270  Sum_probs=91.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|+++|++|+|++.++.     .+.+.+.++.++++++|+++|++++||||||.|       
T Consensus       254 ~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~-------  321 (395)
T 2ib8_A          254 LNDGAAALVLMTADAAKRLNVTPLARIVAFADAAV-----EPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVN-------  321 (395)
T ss_dssp             CEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEEC-------
T ss_pred             cccceeEEEEecHHHHHhcCCCccEEEEEEEEecc-----ChhhccccHHHHHHHHHHHcCCCHHHcCEEEEc-------
Confidence            47999999999999999999999999999997642     223345678999999999999999999999966       


Q ss_pred             CHhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789           81 DLREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        81 D~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      |..|..+             +++++.|.++||+.+|+|+..+++++++|++
T Consensus       322 D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~  372 (395)
T 2ib8_A          322 EAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ  372 (395)
T ss_dssp             CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred             cccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence            4444433             6788999999999999999999999999975

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.65  E-value=3.7e-16  Score=138.47  Aligned_cols=137  Identities=17%  Similarity=0.246  Sum_probs=105.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      ++||++++||++++.|+++|++++++|.|++.+.+....     .+.+...+++++|+++|++++||||||+|.+.+...
T Consensus       264 ~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-----~~~~~~~a~~~al~~Agl~~~dId~~e~hdaf~~~~  338 (407)
T 3svk_A          264 IVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVI-----MLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVV  338 (407)
T ss_dssp             BEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHH
T ss_pred             ccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCcc-----ccHHHHHHHHHHHHHcCCCHHHCCEEEEeChhHHHH
Confidence            479999999999999999999999999999998775432     233457899999999999999999999999888642


Q ss_pred             CHh-hhhc-----ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCC
Q 045789           81 DLR-EYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQF  154 (206)
Q Consensus        81 D~~-E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (206)
                      -.. |...     +++.+.+..+||+.+|+|+..+++++++|+..                                 +.
T Consensus       339 l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~---------------------------------~~  385 (407)
T 3svk_A          339 LKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR---------------------------------NA  385 (407)
T ss_dssp             HHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH---------------------------------TC
T ss_pred             HHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc---------------------------------CC
Confidence            110 1111     56777788899999999999999999999864                                 11


Q ss_pred             CeEEEEEeecccceeEEEccc
Q 045789          155 KTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       155 ~~~~~~~~~~gG~n~~~vl~~  175 (206)
                      ++.+...-..||...++|++.
T Consensus       386 ~~gl~~~c~ggG~g~a~~~e~  406 (407)
T 3svk_A          386 RRALITLCIGGGMGVATIIER  406 (407)
T ss_dssp             CEEEEEEECSSSCEEEEEEEE
T ss_pred             CEEEEEeeccCcceEEEEEEc
Confidence            234444456788888888874

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=99.56  E-value=7.2e-15  Score=125.46  Aligned_cols=139  Identities=17%  Similarity=0.200  Sum_probs=98.9

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEE-EEEEecCCCCCCC-----CCCC---------Ch--------HHHHHHHHHHH
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEI-LDGSLTCDAYHIT-----APHP---------EG--------VGMVSCMEKAL   57 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~-----~~~~---------~~--------~~~~~~~~~al   57 (206)
                      +|||++++||++.+.    +.++++.+ .+.+...|.....     .+.+         ++        ..+.++++++|
T Consensus       155 ~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al  230 (322)
T 1ub7_A          155 FGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAI  230 (322)
T ss_dssp             BCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHH
T ss_pred             eccccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHH
Confidence            589999999998653    34566654 2222222221110     0111         23        57889999999


Q ss_pred             HHcCCCccccccccccCCCCCcCCHhhhhc-c---eeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCC
Q 045789           58 AKSGVAKEDVNYINAHAPSTRLGDLREYQA-L---RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKH  133 (206)
Q Consensus        58 ~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~---~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~  133 (206)
                      +++|++++||+||++|+++++..|.++..- +   .+.+.|.++||+.+|++++.|.++   ++++.+.           
T Consensus       231 ~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~-----------  296 (322)
T 1ub7_A          231 EKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEA---VDAGRIR-----------  296 (322)
T ss_dssp             HHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC-----------
T ss_pred             HHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC-----------
Confidence            999999999999999999999998775433 1   244678899999999999988765   4555441           


Q ss_pred             CCCCCCCcccccccccccCCCCeEEEEEeecccceeEEEcccc
Q 045789          134 VLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                                         +..+.+.++.++|++|+++|++.|
T Consensus       297 -------------------~g~~~l~~~~G~G~~~~~~vl~~~  320 (322)
T 1ub7_A          297 -------------------EGDHVLLVSFGAGLTWAAAVLTWG  320 (322)
T ss_dssp             -------------------TTCEEEEEEEETTTEEEEEEEECC
T ss_pred             -------------------CCCEEEEEEEChhheeEEEEEEeC
Confidence                               124566677779999999999863

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=99.32  E-value=1.4e-12  Score=110.38  Aligned_cols=133  Identities=20%  Similarity=0.257  Sum_probs=93.8

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCC---CCCCC-----CCChH--------HHHHHHHHHHHHcCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAY---HITAP-----HPEGV--------GMVSCMEKALAKSGVAK   64 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~~~-----~~~~~--------~~~~~~~~al~~Agi~~   64 (206)
                      +|||++++||++.+.+    ..+++.+    +.+|+.   ....+     .+++.        .+.++++++|+++|+++
T Consensus       156 ~gdGaaA~vL~~~~~~----~~i~~~~----~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~  227 (309)
T 2ebd_A          156 FGDGAGAVVVTRSEDK----SDILATR----MYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKP  227 (309)
T ss_dssp             BCEEEEEEEEEECSSS----CEEEEEE----EEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred             cccccEEEEEEecCCC----CceeEEE----EEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            4899999999987543    2354443    444442   11111     22444        67889999999999999


Q ss_pred             cccccccccCCCCCcCCHhhhhc-c---eeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCC
Q 045789           65 EDVNYINAHAPSTRLGDLREYQA-L---RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSG  140 (206)
Q Consensus        65 ~dI~~ve~hgtgt~~~D~~E~~a-~---~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~  140 (206)
                      +||+||++|+++++..|.++..- +   .+.+.|.++||+.+|++++.|.+++.   ++.+                   
T Consensus       228 ~did~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~~~---~g~~-------------------  285 (309)
T 2ebd_A          228 EEVSLVIPHQANVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEAIK---EGKV-------------------  285 (309)
T ss_dssp             GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHH---TTCC-------------------
T ss_pred             HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHHHH---cCCC-------------------
Confidence            99999999999999888764332 1   23466889999999999999988743   2211                   


Q ss_pred             cccccccccccCCCCeEEEEEeecccceeEEEcc
Q 045789          141 ASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMA  174 (206)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~  174 (206)
                                 ++..+.+..+.+.|.+..+++++
T Consensus       286 -----------~~G~~~l~~~~G~G~~~~~~~l~  308 (309)
T 2ebd_A          286 -----------KRGDLILMTAMGGGLTWGAVLLR  308 (309)
T ss_dssp             -----------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred             -----------CCCCEEEEEEEchhhhhEEEEEE
Confidence                       11234666666788888888876

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=99.30  E-value=3.4e-12  Score=108.60  Aligned_cols=108  Identities=16%  Similarity=0.219  Sum_probs=80.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEE-EecCCCCCCCC-----------CCCChH--------HHHHHHHHHHHHc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDG-SLTCDAYHITA-----------PHPEGV--------GMVSCMEKALAKS   60 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~-~~~~dg~~~~~-----------~~~~~~--------~~~~~~~~al~~A   60 (206)
                      +|||++++||++.+.     ..+++.+.+. +...|......           ..+++.        .+.++|+++|+++
T Consensus       157 ~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~a  231 (317)
T 1hnj_A          157 FGDGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAAN  231 (317)
T ss_dssp             BCCEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eccccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHc
Confidence            589999999998653     3577776542 22222211111           113455        7789999999999


Q ss_pred             CCCccccccccccCCCCCcCCHhhhhc----ceeccccccccccccccchHHHHHHH
Q 045789           61 GVAKEDVNYINAHAPSTRLGDLREYQA----LRMNSTKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        61 gi~~~dI~~ve~hgtgt~~~D~~E~~a----~~v~s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      |++++||+||++|+++++..|.++..-    -.+.+.|+++||+.+|++.+.|..++
T Consensus       232 gl~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~~  288 (317)
T 1hnj_A          232 NLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAV  288 (317)
T ss_dssp             TCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHH
T ss_pred             CCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHHH
Confidence            999999999999999999999875443    23457889999999999999887664

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=99.30  E-value=3e-12  Score=108.66  Aligned_cols=138  Identities=15%  Similarity=0.209  Sum_probs=93.6

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEE-EEEEEecCCCCCCCCC----CCCh--------HHHHHHHHHHHHHcCCCcccc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAE-ILDGSLTCDAYHITAP----HPEG--------VGMVSCMEKALAKSGVAKEDV   67 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~-I~g~~~~~dg~~~~~~----~~~~--------~~~~~~~~~al~~Agi~~~dI   67 (206)
                      +|||++++||++.+.    +.++++. +.+.+...+......+    ..++        ..+.++++++|+++|++++||
T Consensus       157 ~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~di  232 (313)
T 1zow_A          157 FGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDI  232 (313)
T ss_dssp             BCEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred             eccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence            489999999998654    3455543 2222222221111110    1123        367889999999999999999


Q ss_pred             ccccccCCCCCcCCHhhhhc-c---eeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccc
Q 045789           68 NYINAHAPSTRLGDLREYQA-L---RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASA  143 (206)
Q Consensus        68 ~~ve~hgtgt~~~D~~E~~a-~---~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~  143 (206)
                      +||++|+++++..|.++..- +   .+-..|.++||+.+|++++.|.+++   +.+.+                      
T Consensus       233 d~~~~H~~~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~~---~~~~~----------------------  287 (313)
T 1zow_A          233 DLFIPHQANIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQEL---KNGKL----------------------  287 (313)
T ss_dssp             SEEEECCSCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHH---HTTCC----------------------
T ss_pred             CEEEEcCCCHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHHH---HcCCC----------------------
Confidence            99999999999999875432 1   1224688999999999999987764   33311                      


Q ss_pred             ccccccccCCCCeEEEEEeecccceeEEEccc
Q 045789          144 AFISIPVIKQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                              ++..+.+..+.+.|.+..++|++.
T Consensus       288 --------~~g~~vl~~~~G~G~t~~~~~l~~  311 (313)
T 1zow_A          288 --------KDDDTIVLVGFGGGLTWGAMTIKW  311 (313)
T ss_dssp             --------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred             --------CCCCEEEEEEEchhhhheEEEEEe
Confidence                    122446666677888999988874

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=99.16  E-value=1.7e-11  Score=105.46  Aligned_cols=97  Identities=14%  Similarity=0.074  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-c----eeccccccccccccccchHHHHHHHHHhhhccc
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-L----RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWI  121 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~----~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~i  121 (206)
                      ..+.++++++|+++|++++||+||++|+++++..|.++... +    .+-....++||+.+|++.+.|.+++   +.+.+
T Consensus       231 ~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~~---~~g~~  307 (339)
T 1mzj_A          231 ADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLV---RSGAV  307 (339)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHH---HHTSS
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHHH---HcCCC
Confidence            57888999999999999999999999999999999876543 2    2323346899999999999887664   33322


Q ss_pred             CCCCCCCCCCCCCCCCCCCcccccccccccCCCCeEEEEEeecccceeEEEcccc
Q 045789          122 HPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       122 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                                                    ++..+.+.++.+.|.+..+++++..
T Consensus       308 ------------------------------~~G~~vll~~~G~G~t~~~~~l~~~  332 (339)
T 1mzj_A          308 ------------------------------PGGGPALMIGFGAGLSYAGQALLLP  332 (339)
T ss_dssp             ------------------------------CTTCEEEEEEEETTTEEEEEEEECC
T ss_pred             ------------------------------CCCCEEEEEEEchhheeEEEEEEeC
Confidence                                          1224466667779999999999863

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=99.11  E-value=2.7e-10  Score=97.53  Aligned_cols=137  Identities=19%  Similarity=0.225  Sum_probs=94.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCC---CCCCC----------------CCh--------HHHHHHH
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYH---ITAPH----------------PEG--------VGMVSCM   53 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~~~----------------~~~--------~~~~~~~   53 (206)
                      +|||++++||++.+.|  ++..+++.    ....|+..   ...+.                .++        ..+.+++
T Consensus       157 ~GdGA~A~vL~~~~~a--~~~~i~~~----~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i  230 (331)
T 2x3e_A          157 FGDGAGAVVLRAGDAE--EEGALLAF----DLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSV  230 (331)
T ss_dssp             BCCEEEEEEEEEECTT--STTBEEEE----EEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHH
T ss_pred             eccccEEEEEEecCCC--CCCceEEE----EEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHH
Confidence            5899999999987654  34555543    33344421   11111                123        5778899


Q ss_pred             HHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHHHHHhhhcccCCCCCCCC
Q 045789           54 EKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLEN  129 (206)
Q Consensus        54 ~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~  129 (206)
                      +++|+++|++++||+||++|+++++..|.++..- ++   +-.....+||+.+|+..+.|..++   +.+.+        
T Consensus       231 ~~aL~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~---~~~~~--------  299 (331)
T 2x3e_A          231 RRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHGL---RQGIL--------  299 (331)
T ss_dssp             HHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHH---HTTCS--------
T ss_pred             HHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHHH---HhCCC--------
Confidence            9999999999999999999999999999876544 21   112346899999999888776553   33321        


Q ss_pred             CCCCCCCCCCCcccccccccccCCCCeEEEEEeecccceeEEEcccc
Q 045789          130 PDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                                            ++..+.+..+.+.|.+..+++++.+
T Consensus       300 ----------------------~~G~~vll~~~G~G~~~~~~~l~~~  324 (331)
T 2x3e_A          300 ----------------------RDGGNMVLTGFGAGLTWGSVALRWP  324 (331)
T ss_dssp             ----------------------CTTCEEEEEEEETTTEEEEEEEECC
T ss_pred             ----------------------CCCCEEEEEEEeHHhhheeeEEEEC
Confidence                                  1124466666778889999999874

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=98.81  E-value=1.7e-09  Score=92.35  Aligned_cols=96  Identities=16%  Similarity=0.138  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-c----eeccccccccccccccchHHHHHHHHHhhhccc
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-L----RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWI  121 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~----~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~i  121 (206)
                      ..+.++++++|+++|++++|||||++|+++++..|.++..- +    .+...+..+||+.+|+....|..+   ++.+. 
T Consensus       232 ~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~~~~-  307 (335)
T 1u6e_A          232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL---LTTGA-  307 (335)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH---HHHTS-
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHH---HHcCC-
Confidence            36778999999999999999999999999999999875432 1    232335789999999865433222   11110 


Q ss_pred             CCCCCCCCCCCCCCCCCCCcccccccccccCCCCeEEEEEeecccceeEEEccc
Q 045789          122 HPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMAS  175 (206)
Q Consensus       122 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~  175 (206)
                                                   .++..+.+..+.++|+++.++|++.
T Consensus       308 -----------------------------~~~g~~~l~~~~G~G~t~~~~vl~~  332 (335)
T 1u6e_A          308 -----------------------------AKPGDLALLIGYGAGLSYAAQVVRM  332 (335)
T ss_dssp             -----------------------------SCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred             -----------------------------CCCCCEEEEEEEehhheeEEEEEEe
Confidence                                         0112456667777999999999986

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=98.78  E-value=5.1e-09  Score=91.86  Aligned_cols=111  Identities=12%  Similarity=0.112  Sum_probs=77.5

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEec--CCCCCC--------------CC--CCCChHHHHHHHHHHHHHcCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLT--CDAYHI--------------TA--PHPEGVGMVSCMEKALAKSGV   62 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~--~dg~~~--------------~~--~~~~~~~~~~~~~~al~~Agi   62 (206)
                      +|||++++||++.+.+..++. .+++|.+++..  .|+...              +.  +......+.++++++|+++|+
T Consensus       224 fGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl  302 (393)
T 1ted_A          224 FGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGL  302 (393)
T ss_dssp             BCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCC
Confidence            589999999998755422333 56778887543  555321              00  111234677899999999999


Q ss_pred             CccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHH
Q 045789           63 AKEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        63 ~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      +++|||||..|.++++..|.+|... ++..      .....+||+.+|+-.+.|-.+
T Consensus       303 ~~~dId~~~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~  359 (393)
T 1ted_A          303 QISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETM  359 (393)
T ss_dssp             CGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHH
T ss_pred             CHhHCCEEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHH
Confidence            9999999999999999999887654 3222      235678999988866655433

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=98.78  E-value=3.5e-09  Score=92.60  Aligned_cols=105  Identities=12%  Similarity=0.103  Sum_probs=74.0

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEe--cCCCCC----------------CCCCCCChHHHHHHHHHHHHHcCC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSL--TCDAYH----------------ITAPHPEGVGMVSCMEKALAKSGV   62 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~--~~dg~~----------------~~~~~~~~~~~~~~~~~al~~Agi   62 (206)
                      +|||++++||++.+.   +|.    .|.++..  ..|+..                ...+......+. +++++|+++|+
T Consensus       196 fGDGA~A~vL~~~~~---~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl  267 (382)
T 1u0m_A          196 FGDGIAAAVVRGRGG---TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGW  267 (382)
T ss_dssp             BCEEEEEEEEETTTC---SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSC
T ss_pred             hcCCcEEEEEeccCC---CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCC
Confidence            489999999997643   333    3444433  333321                001112246677 99999999999


Q ss_pred             CccccccccccCCCCCcCCHhhhhc-cee------ccccccccccccccchHHHHHHH
Q 045789           63 AKEDVNYINAHAPSTRLGDLREYQA-LRM------NSTKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        63 ~~~dI~~ve~hgtgt~~~D~~E~~a-~~v------~s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      +++||+||+.|+++++..|.++... ++.      ...+..+||+.+|+..+.|..++
T Consensus       268 ~~~dId~v~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~  325 (382)
T 1u0m_A          268 DASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF  325 (382)
T ss_dssp             CSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH
T ss_pred             CHHHCCEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence            9999999999999999999876654 221      23567899999999888776664

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=98.50  E-value=5.1e-08  Score=84.65  Aligned_cols=109  Identities=14%  Similarity=0.200  Sum_probs=74.3

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEec--CCCC------------CC--CCCCC--ChHHHHHHHHHHHHHcC-
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLT--CDAY------------HI--TAPHP--EGVGMVSCMEKALAKSG-   61 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~--~dg~------------~~--~~~~~--~~~~~~~~~~~al~~Ag-   61 (206)
                      +|||++++||++.+.+..+  .++ +|.+.+..  .++.            ..  ....+  ....+.++++++|+++| 
T Consensus       206 fGDGA~A~vL~~~~~~~~~--~~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~  282 (374)
T 2h84_A          206 FADGSAAYIIGCNPRIEET--PLY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKL  282 (374)
T ss_dssp             BCCEEEEEEEESSCCTTCC--CCE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hccCcEEEEEecCCCcccC--Cce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCC
Confidence            4899999999987654322  344 66665432  1111            00  00001  13567789999999999 


Q ss_pred             -----CCccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHHH
Q 045789           62 -----VAKEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        62 -----i~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                           ++++||+|| .|.++++..|.++... ++..      .....+||+.+|+-.+.|..++
T Consensus       283 ~~~~~l~~~did~~-~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~  345 (374)
T 2h84_A          283 QTSTAISAKDCEFL-IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHAR  345 (374)
T ss_dssp             TSCSCCCSSSSEEE-ECCCCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred             ccccCCChhhcCEe-ECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence                 999999999 9999999999887654 2222      3346789999988777776654

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=98.46  E-value=5.2e-08  Score=94.15  Aligned_cols=118  Identities=13%  Similarity=0.084  Sum_probs=86.2

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCC----------------hHHHHHHHHHHHHHcCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPE----------------GVGMVSCMEKALAKSGVAK   64 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~----------------~~~~~~~~~~al~~Agi~~   64 (206)
                      +||||+|+||++.+.+..++..++....+.....+........+.                ...+.++++++|+++|+++
T Consensus       802 fGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~  881 (979)
T 3tsy_A          802 FGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISD  881 (979)
T ss_dssp             BCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC
T ss_pred             ccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence            499999999998777666777788777777665554332221111                1336789999999999999


Q ss_pred             cccccccccCCCCCcCCHhhhhc-ceecc------ccccccccccccchHHHHHHHHHhhh
Q 045789           65 EDVNYINAHAPSTRLGDLREYQA-LRMNS------TKSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        65 ~dI~~ve~hgtgt~~~D~~E~~a-~~v~s------~k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      +||||++.|.++++..|.+|... ++-..      .-..+||+.+||=.+.|-.+...++.
T Consensus       882 ~did~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~  942 (979)
T 3tsy_A          882 WNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLK  942 (979)
T ss_dssp             GGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHH
T ss_pred             cccceEEECCCChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcc
Confidence            99999999999999999887654 33222      13457999999988888776554443

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=98.05  E-value=3.5e-06  Score=73.95  Aligned_cols=106  Identities=17%  Similarity=0.225  Sum_probs=71.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecC-CCCCCCCCCC------ChHH--------HHHHHHHHHHHcCCCcc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTC-DAYHITAPHP------EGVG--------MVSCMEKALAKSGVAKE   65 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~-dg~~~~~~~~------~~~~--------~~~~~~~al~~Agi~~~   65 (206)
                      +||||+++||++.       ..+++...+.+... |......+.+      ++..        +.++++++|+++|++++
T Consensus       153 ~GdGA~A~vl~~~-------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~  225 (396)
T 1xpm_A          153 QGAGAVAMVIAHN-------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLA  225 (396)
T ss_dssp             CEEEEEEEEEEES-------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred             cccceEEEEeccC-------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence            5899999999863       24555554433222 3221111211      4544        67899999999999999


Q ss_pred             ccccccccCCCCCcCCHhhhhcc------e-------e---ccccccccccccccchHHHHHHH
Q 045789           66 DVNYINAHAPSTRLGDLREYQAL------R-------M---NSTKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        66 dI~~ve~hgtgt~~~D~~E~~a~------~-------v---~s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      ||||+..|.++++..|......+      +       +   -.+...+||+.+||-.+.|..++
T Consensus       226 did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l  289 (396)
T 1xpm_A          226 DFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLL  289 (396)
T ss_dssp             GCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHH
T ss_pred             HCCEEEecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHH
Confidence            99999999999988877653321      1       0   11136789999998888777665

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=98.00  E-value=9.6e-06  Score=69.31  Aligned_cols=66  Identities=17%  Similarity=0.111  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-cee---ccccccccccccccchHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRM---NSTKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v---~s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ..+.++++++|+++|++++||+++..|-.+.+.-|.++... ++.   -.....+||+.+|+=.+.|..+
T Consensus       234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~  303 (333)
T 4dfe_A          234 NVLEKVAVEALEKANLSAEQIDWLIPHQANIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA  303 (333)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH
Confidence            56678999999999999999999999998888777665543 221   1233467999999777666554

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=97.70  E-value=3.5e-05  Score=66.14  Aligned_cols=108  Identities=13%  Similarity=-0.013  Sum_probs=68.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCC-------CCCCh--------HHHHHHHHHHHHHcCCCcc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITA-------PHPEG--------VGMVSCMEKALAKSGVAKE   65 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-------~~~~~--------~~~~~~~~~al~~Agi~~~   65 (206)
                      +|||++++||++.+... .+.    .|.+.....++.....       ...++        ..+.++++++|+++|++++
T Consensus       190 ~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~  264 (345)
T 3s21_A          190 LGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVE  264 (345)
T ss_dssp             BCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred             eccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence            48999999999854321 122    3455544444321110       11121        2345678899999999999


Q ss_pred             ccccccccCCCCCcCCHhhhhc-ceec---cccccccccccccchHHHHHHH
Q 045789           66 DVNYINAHAPSTRLGDLREYQA-LRMN---STKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        66 dI~~ve~hgtgt~~~D~~E~~a-~~v~---s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      ||+++..|-.+...-|.++... ++..   ..-..+||+.+|+-.+.|..++
T Consensus       265 did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~  316 (345)
T 3s21_A          265 ELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLK  316 (345)
T ss_dssp             GCSEEEECCSCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHH
T ss_pred             HCCEEEeCCCCHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHH
Confidence            9999999988887766654433 2221   1224579999998887776654

>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*

Probab=97.67  E-value=5.9e-05  Score=66.23  Aligned_cols=109  Identities=17%  Similarity=0.169  Sum_probs=72.3

Q ss_pred             CCceEEEEEEccchHHHhcC-CceeEEEEEEEecC--CC-CCCC----------CCCCC-----hHHHHHHHHHHHHHcC
Q 045789            1 MGEGAGVLLLEELEHAKKRG-TNIYAEILDGSLTC--DA-YHIT----------APHPE-----GVGMVSCMEKALAKSG   61 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g-~~i~a~I~g~~~~~--dg-~~~~----------~~~~~-----~~~~~~~~~~al~~Ag   61 (206)
                      +||||+|+||++.+..   + ...+.++.+.+...  ++ ....          ...+.     ...+.++++++|+++|
T Consensus       228 fGDGAaA~vL~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag  304 (406)
T 2d3m_A          228 FGDGAAALIIGSDPII---GVEKPMFEIVCTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVG  304 (406)
T ss_dssp             BCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHTTT
T ss_pred             eccceEEEEEecCCCC---ccCCCceEEEecccEEcCCCchhcceeeccCceEEEeCchHHHHHHHHHHHHHHHHHHhcC
Confidence            5899999999875431   2 11234566654321  10 0000          00111     2456789999999999


Q ss_pred             CCcccccc----ccccCCCCCcCCHhhhhc-ce-----ec-cccccccccccccchHHHHHHH
Q 045789           62 VAKEDVNY----INAHAPSTRLGDLREYQA-LR-----MN-STKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        62 i~~~dI~~----ve~hgtgt~~~D~~E~~a-~~-----v~-s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      ++++ ||+    |..|..+++..|.++... ++     .. .+...+||+.+|+-.+.|-.++
T Consensus       305 l~~~-id~~di~~v~Hq~~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L~~~~  366 (406)
T 2d3m_A          305 ITPP-EDWNSLFWIPHPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMR  366 (406)
T ss_dssp             CCCC-SSGGGSEEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred             CCCC-CCccceEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHH
Confidence            9998 999    999999999988876654 32     22 3457789999999888777665

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=96.84  E-value=0.0082  Score=50.89  Aligned_cols=64  Identities=14%  Similarity=0.205  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceecc---ccccccccccccchHHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNS---TKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s---~k~~~Gh~~~asG~~~l~~~  112 (206)
                      +.++++++|+++|++++||+++-.|-.+...-|.++... ++...   .-..+||+.+|+=.+.|..+
T Consensus       226 ~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~  293 (323)
T 3il3_A          226 LSNVVEETLLANNLDKKDLDWLVPHQANLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEA  293 (323)
T ss_dssp             HHHHHHHHHHTTTCCTTTCCEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHH
Confidence            456788999999999999999999977776555544332 22211   12346999998877776654

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=96.50  E-value=0.0016  Score=56.29  Aligned_cols=65  Identities=20%  Similarity=0.264  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceecc---ccccccccccccchHHHHHH
Q 045789           48 GMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNS---TKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        48 ~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s---~k~~~Gh~~~asG~~~l~~~  112 (206)
                      .+.++++++|+++|++++||+++-.|-.+...-+.++... ++...   .-..+||+.+|+=.+.|..+
T Consensus       255 ~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~  323 (359)
T 3h78_A          255 TLVRIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMF  323 (359)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHH
Confidence            3456889999999999999999999977766555443332 22111   12356999998777766554

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=96.43  E-value=0.026  Score=48.61  Aligned_cols=65  Identities=11%  Similarity=0.125  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec---cccccccccccccchHHHHHH
Q 045789           48 GMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN---STKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        48 ~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~---s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      .+.++++++|+++|++++||+++-.|-.+...-|.++... ++-.   ..-..+||+.+|+=.+.|-.+
T Consensus       267 ~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~~  335 (365)
T 3gwa_A          267 EVPRAADRLLALAGEPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALETM  335 (365)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHHH
Confidence            3456889999999999999999999977776655554333 2211   222467999988766655443

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=96.41  E-value=0.027  Score=48.33  Aligned_cols=65  Identities=20%  Similarity=0.180  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHHHcCCCccccccccc-cCCCCCcCCHh-hhhcceecccc----ccccccccccchHHHHHHH
Q 045789           48 GMVSCMEKALAKSGVAKEDVNYINA-HAPSTRLGDLR-EYQALRMNSTK----SLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        48 ~~~~~~~~al~~Agi~~~dI~~ve~-hgtgt~~~D~~-E~~a~~v~s~k----~~~Gh~~~asG~~~l~~~~  113 (206)
                      .+.++++++|+++|++++||+++-. |-.... -+.+ +...++...+-    ..+||+.+|+-.+.|..++
T Consensus       239 ~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~~~~~~GNt~aAsipl~L~~~~  309 (357)
T 3s3l_A          239 LLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHLV  309 (357)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTHHHHHHHCBCTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHHHhccccccchHhHHHHHHHHHH
Confidence            3456889999999999999999996 866665 4433 22223332222    2468888887776666553

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=95.74  E-value=0.011  Score=51.55  Aligned_cols=61  Identities=5%  Similarity=0.046  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc--ceecccc-----ccccccccccchHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA--LRMNSTK-----SLIGHLLGASGAAEA  109 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a--~~v~s~k-----~~~Gh~~~asG~~~l  109 (206)
                      +.++++++|+++|++++||+++-.|-.+...-|.+....  +.+..-|     ..+||+.+|+=.+.|
T Consensus       293 ~~~~i~~~L~~~gl~~~dId~~v~Hqan~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L  360 (392)
T 3led_A          293 VSEMIIEHAREIGIDPHGLKRMWLHQANINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAF  360 (392)
T ss_dssp             HHHHHHHHHHHTTCCGGGCSEEEECSSCHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHCcEEEEcCCCHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHH
Confidence            345789999999999999999999977766555543321  1222122     346999877655444

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=95.72  E-value=0.0057  Score=53.07  Aligned_cols=67  Identities=13%  Similarity=0.125  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHcCCC-ccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVA-KEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVATIK  114 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~-~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~~l  114 (206)
                      ..+.++++++|+++|++ .+|| ++-.|-.+...-|.++... ++..      .+...+||+.+|+-.+.|-.++.
T Consensus       273 ~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~  347 (387)
T 3a5r_A          273 NNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRK  347 (387)
T ss_dssp             HHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHH
Confidence            44567889999999998 8899 8999988887777665443 3322      23466899999988887776653

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=95.64  E-value=0.014  Score=50.07  Aligned_cols=65  Identities=14%  Similarity=0.043  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceecc---ccccccccccccchHHHHHH
Q 045789           48 GMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNS---TKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        48 ~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s---~k~~~Gh~~~asG~~~l~~~  112 (206)
                      .+.++++++|+++|++++||+++-.|-.+...-|.++... ++...   .-..+||+.+|+=.+.|..+
T Consensus       245 ~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~  313 (354)
T 4efi_A          245 AVPKLVSRTLDIAGRDKDSYDAFLFHQANLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTE  313 (354)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHH
Confidence            4456789999999999999999999977776655544332 22211   12457999988777766554

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=95.64  E-value=0.0092  Score=52.99  Aligned_cols=79  Identities=18%  Similarity=0.224  Sum_probs=48.7

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecC--CCCCC----CCCCCChH--------HHHHHHHHHHH------Hc
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTC--DAYHI----TAPHPEGV--------GMVSCMEKALA------KS   60 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~--dg~~~----~~~~~~~~--------~~~~~~~~al~------~A   60 (206)
                      .||||+|+||++...    . .+.....|.....  |....    ..+..++.        .+.++++.+++      ++
T Consensus       159 fGDGA~A~ll~~~~~----~-~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~a  233 (450)
T 2f82_A          159 GGAAAIAMLIGPDAP----I-VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGK  233 (450)
T ss_dssp             CEEEEEEEEEESSCS----E-EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             cccceEEEEeccCCc----e-EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            489999999986431    1 1222223433321  10111    11223332        34567788886      88


Q ss_pred             CCCccccccccccCCCCCcCCHhh
Q 045789           61 GVAKEDVNYINAHAPSTRLGDLRE   84 (206)
Q Consensus        61 gi~~~dI~~ve~hgtgt~~~D~~E   84 (206)
                      |++++||+++..|..+++..+.+.
T Consensus       234 gl~~~did~~v~Hq~~~~i~~~~~  257 (450)
T 2f82_A          234 EFSINDADYFVFHSPYNKLVQKSF  257 (450)
T ss_dssp             CCCGGGCSEEEECCSSHHHHHHHH
T ss_pred             CCChhhcCEEEecCChHHHHHHHH
Confidence            999999999999999988776654

>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A

Probab=95.32  E-value=0.0065  Score=53.05  Aligned_cols=67  Identities=22%  Similarity=0.194  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHHHcCCC-ccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVA-KEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVATIK  114 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~-~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~~l  114 (206)
                      ..+.++++++|+++|++ .+|| ++-.|-.+...-|.++... ++..      .+...+||+.+|+-.+.|-.++.
T Consensus       282 ~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~  356 (402)
T 1ee0_A          282 KNIENAAEKALSPLGITDWNSV-FWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRK  356 (402)
T ss_dssp             HHHHHHHHHHHGGGTCCCGGGS-EEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCccccc-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHHHHHHHH
Confidence            34567889999999998 8899 8999988887777665544 3322      23456899999988887776653

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=95.29  E-value=0.014  Score=51.19  Aligned_cols=67  Identities=18%  Similarity=0.153  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHHcCCC-ccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVA-KEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVATIK  114 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~-~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~~l  114 (206)
                      ..+.++++++|+++|++ .+|| ++-.|-.+...-|.++... ++..      .+...+||+.+|+-.+.|-.++.
T Consensus       300 ~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~  374 (413)
T 1xes_A          300 ANIENCMVEAFSQFKISDWNKL-FWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRK  374 (413)
T ss_dssp             HHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCccce-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHH
Confidence            45567889999999998 8888 7889988877777665443 3322      22456899999988887776653

>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*

Probab=95.25  E-value=0.0061  Score=52.90  Aligned_cols=66  Identities=15%  Similarity=0.127  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHHcCCC-ccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVA-KEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~-~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      ..+.++++++|+++|++ .+|| ++-.|-.+...-|.++... ++..      .+...+||+.+|+-.+.|-.++
T Consensus       277 ~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~~~  350 (389)
T 1i88_A          277 KNITKALVEAFEPLGISDYNSI-FWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR  350 (389)
T ss_dssp             HHHHHHHHHHHGGGTCCCTTSS-EEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCchhhc-eEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence            44567889999999998 8888 8999998888777765543 3322      2345689999998887777665

>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}

Probab=94.91  E-value=0.028  Score=49.27  Aligned_cols=67  Identities=13%  Similarity=0.067  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHcCCC-ccccccccccCCCCCcCCHhhhhc-ceecc------ccccccccccccchHHHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVA-KEDVNYINAHAPSTRLGDLREYQA-LRMNS------TKSLIGHLLGASGAAEAVATIK  114 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~-~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s------~k~~~Gh~~~asG~~~l~~~~l  114 (206)
                      ..+.++++++|+++|++ .+|| ++-.|-.+....|.++... ++...      +-..+||+.+|+-.+.|-.++.
T Consensus       295 ~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~  369 (413)
T 2p0u_A          295 KNIGGFLKDTKNLVGASSWNEL-FWAVHPGGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRE  369 (413)
T ss_dssp             HHHHHHHHHHHHHTTCCSGGGS-EEEECCSSHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCccce-EEEECCCCHHHHHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHHHHH
Confidence            45667889999999998 7888 8999988888777765544 33222      2356899999988887776653

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=94.66  E-value=0.053  Score=47.20  Aligned_cols=65  Identities=25%  Similarity=0.191  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHcCCCc-cccccccccCCCCCcCCHhhhhc-ceeccc------cccccccccccchHHHHHHHH
Q 045789           49 MVSCMEKALAKSGVAK-EDVNYINAHAPSTRLGDLREYQA-LRMNST------KSLIGHLLGASGAAEAVATIK  114 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~-~dI~~ve~hgtgt~~~D~~E~~a-~~v~s~------k~~~Gh~~~asG~~~l~~~~l  114 (206)
                      +.++++++|+++|+++ +|| ++-.|=.+...-|.++... ++-..+      -..+||+.+|+=.+.|-.++.
T Consensus       279 ~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~  351 (393)
T 3ov2_A          279 LGRSLERALAPLGVREWNDV-FWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRK  351 (393)
T ss_dssp             SHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCcccCc-EEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHH
Confidence            3468999999999997 888 8888976666555554433 333322      234799999988777766553

>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A

Probab=94.64  E-value=0.024  Score=49.44  Aligned_cols=66  Identities=14%  Similarity=0.080  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHcCCC-ccccccccccCCCCCcCCHhhhhc-ceecc------ccccccccccccchHHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVA-KEDVNYINAHAPSTRLGDLREYQA-LRMNS------TKSLIGHLLGASGAAEAVATI  113 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~-~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s------~k~~~Gh~~~asG~~~l~~~~  113 (206)
                      ..+.++++++|+++|++ .+|| ++-.|-.+...-|.++... ++...      +-..+||+.+|+-.+.|-.++
T Consensus       290 ~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~  363 (402)
T 3awk_A          290 KNIDKVLAEPLEYVHFPSYNDM-FWAVHPGGPAILDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIR  363 (402)
T ss_dssp             HHHHHHTHHHHHHTTCCCGGGE-EEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCccce-eEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHH
Confidence            34567888999999998 7888 8999988888777765544 33222      235689999998887777665

>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*

Probab=94.30  E-value=0.035  Score=48.09  Aligned_cols=110  Identities=14%  Similarity=0.094  Sum_probs=63.1

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecC--CCCC-C----------CCCCCC-----hHHHHHHHHHHHHH---
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTC--DAYH-I----------TAPHPE-----GVGMVSCMEKALAK---   59 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~--dg~~-~----------~~~~~~-----~~~~~~~~~~al~~---   59 (206)
                      +||||+|+||++..... ..+..+..|.++....  +... .          ....+.     ...+.++++++|++   
T Consensus       201 FGDGAaAvvl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~  279 (379)
T 3euo_A          201 FSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQD  279 (379)
T ss_dssp             BCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCGGGEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             ecCccEEEEEecCCCCc-cccccceeeeceeEEEecCchhhcCceecCCCcEEEeChHHHHHHHHHHHHHHHHHHHhcCc
Confidence            48999999999753211 1122334454443211  1100 0          000111     24566788888886   


Q ss_pred             ----cCCCccccccccccCCCCCcCCHhhhhc-ceecccc------ccccccccccchHHHHHH
Q 045789           60 ----SGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNSTK------SLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        60 ----Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s~k------~~~Gh~~~asG~~~l~~~  112 (206)
                          +|++++||+|+ .|=.+...-|.++..- ++-..+.      ..+||+.+|+=.+.|-.+
T Consensus       280 ~l~~~gl~~~did~~-~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~  342 (379)
T 3euo_A          280 QLPSSYQKPADFDWA-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRL  342 (379)
T ss_dssp             GSCTTSCSGGGSEEE-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred             ccccccCChhHeeEE-eCCCChHHHHHHHHHhCCCHHHHHHHHHHHHhcCccHHHHHHHHHHHH
Confidence                58999999998 9977777666665443 3333221      245999888766655544

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=94.12  E-value=0.038  Score=49.35  Aligned_cols=65  Identities=12%  Similarity=0.021  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHHHH-------cCCCccccccccccCCCCCcCCHhhhhc-ceecccc------ccccccccccchHHHHHH
Q 045789           47 VGMVSCMEKALAK-------SGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNSTK------SLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        47 ~~~~~~~~~al~~-------Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s~k------~~~Gh~~~asG~~~l~~~  112 (206)
                      ..+.++++++|++       +|++++||+|+ .|=.+...-|.++..- ++-..+.      ..+||+.+|+=.+.|-.+
T Consensus       293 ~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~  371 (465)
T 3e1h_A          293 ASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRL  371 (465)
T ss_dssp             HHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccccccccCCCHHHceEE-ecCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHH
Confidence            4556778888887       67999999998 9977776666665443 3333221      235999888666555443

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=93.25  E-value=0.089  Score=45.75  Aligned_cols=67  Identities=16%  Similarity=0.217  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCH-----h----hhhc----ce---eccccccccccccccchHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL-----R----EYQA----LR---MNSTKSLIGHLLGASGAAEAV  110 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~-----~----E~~a----~~---v~s~k~~~Gh~~~asG~~~l~  110 (206)
                      ..+.++++++|+++|++++||+++-.|-...+....     +    |...    ++   .-..-..+||+.+||=.+.|.
T Consensus       212 ~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~e~~~~~~~~~GN~~sASi~l~L~  291 (388)
T 3v4n_A          212 QSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARYEESIIYSRRVGNLYTGSLYLGLI  291 (388)
T ss_dssp             HHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTTTGGGTCCCGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhCCCHHHHhhHHHhcCchHHHHHHHHHH
Confidence            445668899999999999999999999733221100     0    1111    11   112345679999988777766


Q ss_pred             HHH
Q 045789          111 ATI  113 (206)
Q Consensus       111 ~~~  113 (206)
                      .++
T Consensus       292 ~~l  294 (388)
T 3v4n_A          292 SLL  294 (388)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A

Probab=91.61  E-value=0.07  Score=47.09  Aligned_cols=67  Identities=15%  Similarity=0.054  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCc--------CC-----Hh-hhhccee---ccccccccccccccchHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL--------GD-----LR-EYQALRM---NSTKSLIGHLLGASGAAEA  109 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~--------~D-----~~-E~~a~~v---~s~k~~~Gh~~~asG~~~l  109 (206)
                      ..+.++++++|+++|++++||+++-.|-...+.        -+     .. +...++.   -..-..+||+.+||=.+.|
T Consensus       241 ~~l~~~~~~~l~~~gl~~~Did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~~l~~~~e~~~~~~~~~GNt~sASi~l~L  320 (425)
T 3sqz_A          241 DMLKTTWAEYQKRFDVSLTDFAAFCFHLPFPKLALKGFNKIMDKQVPSDLQEKLKVNFEASILYSKQIGNIYTGSLFLGL  320 (425)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHHHCCTTSCHHHHHHHHHHHHHHHTTHHHHBCCGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCEEEECCCcchhHHHHHHHHHhccchHHHHHHhCCCHHHHhhHHhccCccHHHHHHHHH
Confidence            345568899999999999999999999744321        11     00 0000111   1233457999998877776


Q ss_pred             HHHH
Q 045789          110 VATI  113 (206)
Q Consensus       110 ~~~~  113 (206)
                      ..++
T Consensus       321 ~~~l  324 (425)
T 3sqz_A          321 LSLL  324 (425)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=91.59  E-value=0.13  Score=44.50  Aligned_cols=65  Identities=17%  Similarity=0.158  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHc----CCC-ccccccccccCCCCCcCCHhhhhc-ceeccc------cccccccccccchHHHHHH
Q 045789           47 VGMVSCMEKALAKS----GVA-KEDVNYINAHAPSTRLGDLREYQA-LRMNST------KSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        47 ~~~~~~~~~al~~A----gi~-~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s~------k~~~Gh~~~asG~~~l~~~  112 (206)
                      ..+.++++++|+++    |++ .+|+ ++-.|-.+...-|.++..- ++-..+      -..+||+.+|+=.+.|-.+
T Consensus       270 ~~~~~~~~~~L~~~~~~~gl~d~d~~-~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~  346 (387)
T 3oit_A          270 DNVERCLLDMFGPLLGGDGGGGWNDL-FWAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDEL  346 (387)
T ss_dssp             HHHHHHHHHHTGGGCC------GGGS-EEEECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcccCCCCccccc-EEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHH
Confidence            34566888888888    987 3444 8889977777666665443 333322      2347999988777766553

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=88.77  E-value=0.68  Score=39.71  Aligned_cols=63  Identities=14%  Similarity=0.243  Sum_probs=39.3

Q ss_pred             CceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCC------hHHHHHHHHHHHHHcCCCcccccccccc
Q 045789            2 GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPE------GVGMVSCMEKALAKSGVAKEDVNYINAH   73 (206)
Q Consensus         2 gEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~------~~~~~~~~~~al~~Agi~~~dI~~ve~h   73 (206)
                      ++|++|+||.+..      ..+  +|.+......- .....+|.      .++..+.+.+.|+++|++|+|+|+|-.+
T Consensus       165 ~dGAGA~VL~~~g------~~p--~I~~~t~Gkvv-d~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg  233 (347)
T 3lma_A          165 VTGSGAVVLSQQP------GGI--KITSATVGRVI-DLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTG  233 (347)
T ss_dssp             CCEEEEEEEESSC------CSE--EEEEEECCCCB-CCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred             ccceeEEEEEecC------CCC--ceeeeeeeeee-ccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecC
Confidence            5899999999642      222  24443221100 01222322      3445578899999999999999999954

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=87.61  E-value=0.95  Score=37.85  Aligned_cols=49  Identities=18%  Similarity=0.171  Sum_probs=32.4

Q ss_pred             ccccccccccCCCCCcCCHhhhhc-ceec---cccccccccccccchHHHHHH
Q 045789           64 KEDVNYINAHAPSTRLGDLREYQA-LRMN---STKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        64 ~~dI~~ve~hgtgt~~~D~~E~~a-~~v~---s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ++||+++-.|-.+...-|.++... ++..   ..-..+||+.+|+=.+.|-.+
T Consensus       237 ~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~  289 (321)
T 3il6_A          237 DETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEA  289 (321)
T ss_dssp             GGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCCGGGTCBCGGGHHHHHHHHH
T ss_pred             cccCCEEEEcCCCHHHHHHHHHHcCcCHHHhhhhHhhcccHHHHHHHHHHHHH
Confidence            899999999977776555544332 2211   233567999988777666554

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=86.86  E-value=0.29  Score=41.35  Aligned_cols=64  Identities=23%  Similarity=0.158  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceecc----ccccccccccccchHHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNS----TKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s----~k~~~Gh~~~asG~~~l~~~  112 (206)
                      +.++++++|+++|++++||+++-.|-.+...-|.++..- ++-..    .-..+||+.+|+=.+.|-.+
T Consensus       251 ~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~  319 (350)
T 4ewp_A          251 MAKVAREALDAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRL  319 (350)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHH
T ss_pred             hhHHHHHHHHhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHH
Confidence            456889999999999999999999977776666554332 22111    11346999888766655443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	206
d2ix4a2	161	c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II	6e-27
d1e5ma2	161	c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II	6e-24
d2gfva2	161	c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II	5e-22
d1j3na2	159	c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II	5e-21
d1tqya2	205	c.95.1.1 (A:219-423) Actinorhodin polyketide putat	2e-20
d1ox0a2	158	c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II	9e-20
d2vbaa2	151	c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I	1e-17
d1tqyb2	194	c.95.1.1 (B:210-403) Actinorhodin polyketide putat	7e-13
d2vbaa1	253	c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E	8e-07
d2ix4a1	270	c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II	1e-06
d1e5ma1	250	c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {	1e-05
d1ox0a1	256	c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II	2e-05
d1j3na1	249	c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {	2e-05
d2gfva1	250	c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {	2e-05

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

 Score = 98.7 bits (245), Expect = 6e-27
 Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 13/124 (10%)

Query: 24  YAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL- 82
           YAE+    ++ DA+HIT P  +G G V  M +AL +SG+    ++Y+NAHA ST +GD  
Sbjct: 1   YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAV 60

Query: 83  ------------REYQALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENP 130
                            L  +STK   GHLLGA+GA EA+ +I AI  G     LN++NP
Sbjct: 61  EARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 120

Query: 131 DKHV 134
           D   
Sbjct: 121 DPIF 124

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

 Score = 91.0 bits (225), Expect = 6e-24
 Identities = 57/123 (46%), Positives = 74/123 (60%), Gaps = 11/123 (8%)

Query: 23  IYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL 82
           IY E++  ++TCDAYHITAP P+G G    +  AL  SG+  E V+YINAH  ST   D+
Sbjct: 2   IYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDV 61

Query: 83  REYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPD 131
            E +A           + ++STKS+ GHLLG SG  EAVAT+ AI    + P +NLENPD
Sbjct: 62  TETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPD 121

Query: 132 KHV 134
              
Sbjct: 122 PEC 124

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

 Score = 86.0 bits (212), Expect = 5e-22
 Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 11/122 (9%)

Query: 23  IYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL 82
           IYAE++   ++ DAYH+T+P   G G    M  AL  +G+    + Y+NAH  ST  GD 
Sbjct: 2   IYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDK 61

Query: 83  REYQALR-----------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPD 131
            E QA++           ++STKS+ GHLLGA+GA E++ +I A++   + P +NL+NPD
Sbjct: 62  AEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPD 121

Query: 132 KH 133
           + 
Sbjct: 122 EG 123

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score = 83.3 bits (205), Expect = 5e-21
 Identities = 64/156 (41%), Positives = 89/156 (57%), Gaps = 23/156 (14%)

Query: 23  IYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL 82
           IYAE++    + DA+HIT PHPEG G    M +AL  +G+A E V YINAH  ST +GD 
Sbjct: 2   IYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDR 61

Query: 83  REYQAL-----------RMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPD 131
            E  A+            ++STKS+IGHLLGA+GA EA+AT++A+  G I P +NLE+PD
Sbjct: 62  AEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPD 121

Query: 132 KHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSF 167
             +             +P  ++ K  + L +   SF
Sbjct: 122 PEL---------DLDFVPEPREAKVDYALSN---SF 145

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 82.9 bits (204), Expect = 2e-20
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 11/145 (7%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKS 60
           + EGA + +LE+ + A  RG  I+AEI   +  C+AYH+T    +G  M   +  AL +S
Sbjct: 19  LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDES 78

Query: 61  GVAKEDVNYINAHAPSTRLGDLREYQALR-----------MNSTKSLIGHLLGASGAAEA 109
                D++YINAH   TR  D  E  A +           ++S KS++GH LGA G+ E 
Sbjct: 79  RTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEI 138

Query: 110 VATIKAIQTGWIHPNLNLENPDKHV 134
            A + A++ G + P  NL   D   
Sbjct: 139 AACVLALEHGVVPPTANLRTSDPEC 163

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 79.8 bits (196), Expect = 9e-20
 Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 8/120 (6%)

Query: 23  IYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL 82
           I AE++    TCDAYH+T+PHPEG G +  ++ AL ++ ++ E V Y+NAH  ST   + 
Sbjct: 2   ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61

Query: 83  REY--------QALRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHV 134
            E         + + ++STKS  GHLLGA+GA EA+ TI+A++  ++           ++
Sbjct: 62  GESGAIVAVLGKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYI 121

>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

 Score = 74.4 bits (182), Expect = 1e-17
 Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 14/120 (11%)

Query: 24  YAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLR 83
           YAEI+    T D   + AP  E  G V CM+ A+         ++Y+N+H  ST +GD++
Sbjct: 1   YAEIVGYGATSDGADMVAPSGE--GAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVK 55

Query: 84  EYQALR---------MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHV 134
           E  A+R         +++TK++ GH LGA+G  EA+ ++  ++ G+I P++N+E  D+  
Sbjct: 56  ELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQA 115

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 62.3 bits (150), Expect = 7e-13
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 13/144 (9%)

Query: 1   MGEGAGVLLLEELEHAKKRG-TNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAK 59
            GEG  +L+LE+   A+ RG  + Y E+   + T D            G+   +  AL  
Sbjct: 18  PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP---GSGRPAGLERAIRLALND 74

Query: 60  SGVAKEDVNYINAHAPSTRLGDLREYQALRM---------NSTKSLIGHLLGASGAAEAV 110
           +G   EDV+ + A        D  E +A+              K+  G L    G  + V
Sbjct: 75  AGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVV 134

Query: 111 ATIKAIQTGWIHPNLNLENPDKHV 134
             + +++ G I P   + +  +  
Sbjct: 135 TALMSLREGVIAPTAGVTSVPREY 158

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

 Score = 46.1 bits (108), Expect = 8e-07
 Identities = 11/23 (47%), Positives = 17/23 (73%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNI 23
           +  G G++++EELEHA  RG +I
Sbjct: 231 IAGGGGMVVVEELEHALARGAHI 253

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

 Score = 45.4 bits (106), Expect = 1e-06
 Identities = 15/23 (65%), Positives = 20/23 (86%)

Query: 1   MGEGAGVLLLEELEHAKKRGTNI 23
           +GEG+GV++LEE EHAK+RG  I
Sbjct: 248 IGEGSGVIVLEEYEHAKRRGAKI 270

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 14/20 (70%), Positives = 17/20 (85%)

Query: 1   MGEGAGVLLLEELEHAKKRG 20
           MGEG+G+L+LEELE A  RG
Sbjct: 230 MGEGSGILILEELESALARG 249

>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 15/20 (75%), Positives = 19/20 (95%)

Query: 1   MGEGAGVLLLEELEHAKKRG 20
           MGEG+G+L+LE LEHA+KRG
Sbjct: 236 MGEGSGMLVLESLEHAEKRG 255

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 17/20 (85%), Positives = 18/20 (90%)

Query: 1   MGEGAGVLLLEELEHAKKRG 20
           MGEGAGVL+LE  EHAKKRG
Sbjct: 229 MGEGAGVLVLEAYEHAKKRG 248

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

 Score = 42.1 bits (98), Expect = 2e-05
 Identities = 15/20 (75%), Positives = 19/20 (95%)

Query: 1   MGEGAGVLLLEELEHAKKRG 20
           +G+GAG+L+LEE EHAKKRG
Sbjct: 230 LGDGAGMLVLEEYEHAKKRG 249

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	206
d1tqya2	205	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d1tqyb2	194	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d1e5ma2	161	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	100.0
d1j3na2	159	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	100.0
d2gfva2	161	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	100.0
d1ox0a2	158	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	100.0
d2ix4a2	161	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	100.0
d2vbaa2	151	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	100.0
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	98.83
d1wdkc2	128	Fatty oxidation complex beta subunit (3-ketoacyl-C	98.67
d1ulqa2	125	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	98.64
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	98.64
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	95.9
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	94.44
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	93.88
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	93.0
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	92.6
d1u0ma2	148	Putative polyketide synthase SCO1206 {Streptomyces	90.63
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	86.19
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	81.89

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2e-43  Score=285.59  Aligned_cols=171  Identities=32%  Similarity=0.452  Sum_probs=156.4

Q ss_pred             CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789            1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG   80 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~   80 (206)
                      +|||++++|||++++|+++|++||++|.|+++++|+.+.+.+.|++..+.++++++|++++++++||+|||+|||||+.+
T Consensus        19 ~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~~~i~~ie~hgtGt~~~   98 (205)
T d1tqya2          19 LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQN   98 (205)
T ss_dssp             EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHH
T ss_pred             eEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCccceeeeeccccccccC
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789           81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP  149 (206)
Q Consensus        81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (206)
                      |.+|+.+           ++|+++|+++||+++|||+++|+|++++|++++|||+.|+++++|+++++.+++    +..+
T Consensus        99 D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~p~~~~~~v~~----~~~~  174 (205)
T d1tqya2          99 DRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPL----EARE  174 (205)
T ss_dssp             HHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBS----SCEE
T ss_pred             chhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCCCCCCCcccCCC----CCcC
Confidence            9999988           779999999999999999999999999999999999999999999988765553    3333


Q ss_pred             ccCCCCeEEEEEeecccceeEEEccccC
Q 045789          150 VIKQFKTRFVLISFNGSFLSSLYMASCF  177 (206)
Q Consensus       150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~~  177 (206)
                      |  +.++.++++.+|||+|+|+||++++
T Consensus       175 ~--~~~~a~~~s~GfGG~na~~vl~~~~  200 (205)
T d1tqya2         175 R--KLRSVLTVGSGFGGFQSAMVLRDAE  200 (205)
T ss_dssp             C--CCSEEEEEEEETTTEEEEEEEECHH
T ss_pred             C--CCCEEEEeCCCCCceeEEEEEeeCC
Confidence            3  3455666666799999999999875

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=3.9e-41  Score=269.95  Aligned_cols=167  Identities=23%  Similarity=0.278  Sum_probs=145.7

Q ss_pred             CCceEEEEEEccchHHHhcCC-ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789            1 MGEGAGVLLLEELEHAKKRGT-NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL   79 (206)
Q Consensus         1 lgEGa~alvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~   79 (206)
                      +|||++++|||++++|+++|+ +||++|.|+++++|+.+.+   +++.+++++|+++|++++++++||+|||+|||||+.
T Consensus        18 ~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~---~~~~g~~~~i~~aL~~a~i~~~di~~v~ahgtGt~~   94 (194)
T d1tqyb2          18 PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS---GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPE   94 (194)
T ss_dssp             BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC---CCCCSHHHHHHHHHHHHTCCGGGCCEEECCCCCSHH
T ss_pred             eEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc---cchhhhhhhhhhhcccccccccceeeeeccccCccc
Confidence            589999999999999999997 6999999999999986543   233457899999999999999999999999999999


Q ss_pred             CCHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 045789           80 GDLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPV  150 (206)
Q Consensus        80 ~D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (206)
                      +|.+|..+         ++|+++|+++||+++|||+++|+|++++|++++|||+.|+++++++++++...    .  +++
T Consensus        95 ~D~~E~~al~~~f~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~~~~~~~~v~----~--~~~  168 (194)
T d1tqyb2          95 LDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVL----G--EPR  168 (194)
T ss_dssp             HHHHHHHHHHHHHCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECB----S--SCB
T ss_pred             ccHHHhhhhhhhhhccccccccccccccccccccccceehhhhhhhhhceeccccCCCCCCcccCccccC----C--CCc
Confidence            99999988         78999999999999999999999999999999999999999999987654332    2  233


Q ss_pred             cCCCCeEEEEEeecccceeEEEcccc
Q 045789          151 IKQFKTRFVLISFNGSFLSSLYMASC  176 (206)
Q Consensus       151 ~~~~~~~~~~~~~~gG~n~~~vl~~~  176 (206)
                      +...++.++++.+|||+|+|+||+++
T Consensus       169 ~~~~~~a~v~s~GfgG~na~~vl~~~  194 (194)
T d1tqyb2         169 STAPRTALVLARGRWGFNSAAVLRRF  194 (194)
T ss_dssp             CCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred             cCCCCEEEEECcCCCceeEEEEEeeC
Confidence            34445666666679999999999864

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=100.00  E-value=1.4e-39  Score=253.74  Aligned_cols=149  Identities=40%  Similarity=0.544  Sum_probs=134.1

Q ss_pred             ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-----------cee
Q 045789           22 NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-----------LRM   90 (206)
Q Consensus        22 ~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-----------~~v   90 (206)
                      +|||+|+|+++++||.+.+.++|++.++.++|++||++|+++|+||+|||+|||||+.+|.+|..+           ++|
T Consensus         1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v   80 (161)
T d1e5ma2           1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV   80 (161)
T ss_dssp             CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred             CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence            699999999999999999999999999999999999999999999999999999999999999988           789


Q ss_pred             ccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCeEEEEEeecccceeE
Q 045789           91 NSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSS  170 (206)
Q Consensus        91 ~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~  170 (206)
                      +|+|+++||+++|||++++++++++|++++|||++|+++|+|.++....+.    +..+|  ..++.+.++++|||+|+|
T Consensus        81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~~----~~~~~--~~~~a~~nsfGfGG~Na~  154 (161)
T d1e5ma2          81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPG----QSRAL--IVDVALSNSFGFGGHNVT  154 (161)
T ss_dssp             ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBS----SCEEC--CCSEEEEEEEETTTEEEE
T ss_pred             EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCcC----cccCC--CCCEEEEeCcCcCcEeEE
Confidence            999999999999999999999999999999999999999999987655443    33333  334555555569999999


Q ss_pred             EEcccc
Q 045789          171 LYMASC  176 (206)
Q Consensus       171 ~vl~~~  176 (206)
                      +||+++
T Consensus       155 lvl~~y  160 (161)
T d1e5ma2         155 LAFKKY  160 (161)
T ss_dssp             EEEECC
T ss_pred             EEEeee
Confidence            999976

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.2e-39  Score=251.18  Aligned_cols=147  Identities=43%  Similarity=0.584  Sum_probs=133.8

Q ss_pred             ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-----------cee
Q 045789           22 NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-----------LRM   90 (206)
Q Consensus        22 ~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-----------~~v   90 (206)
                      +||++|+|+++++||.+.+.++|++.++.++|+++|+++|++|+||+|||+|||||+.+|.+|..|           ++|
T Consensus         1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i   80 (159)
T d1j3na2           1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV   80 (159)
T ss_dssp             CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred             CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence            699999999999999999999999999999999999999999999999999999999999999998           789


Q ss_pred             ccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCeEEEEEeecccceeE
Q 045789           91 NSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSS  170 (206)
Q Consensus        91 ~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~  170 (206)
                      +++|+++||+++|||++++++++++|++++|||+++++++++++++...+       ++|+.+.++.++++++|||+|+|
T Consensus        81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-------~~~~~~~~~a~v~sfGfgG~Na~  153 (159)
T d1j3na2          81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP-------EPREAKVDYALSNSFAFGGHNAV  153 (159)
T ss_dssp             ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS-------SCEECCCSEEEEEEECTTSEEEE
T ss_pred             ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccC-------cccCCCCCEEEEeCCCCCceeEE
Confidence            99999999999999999999999999999999999999999988765444       34444555555555569999999


Q ss_pred             EEccc
Q 045789          171 LYMAS  175 (206)
Q Consensus       171 ~vl~~  175 (206)
                      +||++
T Consensus       154 ~vl~k  158 (159)
T d1j3na2         154 LAFKR  158 (159)
T ss_dssp             EEEEC
T ss_pred             EEEEE
Confidence            99985

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.7e-39  Score=251.26  Aligned_cols=149  Identities=34%  Similarity=0.494  Sum_probs=131.8

Q ss_pred             ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-----------cee
Q 045789           22 NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-----------LRM   90 (206)
Q Consensus        22 ~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-----------~~v   90 (206)
                      +||++|+|+++++||.+.+.++|++.++.++|+++|++++++|+||+|||+|||||+.+|.+|..|           ++|
T Consensus         1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i   80 (161)
T d2gfva2           1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV   80 (161)
T ss_dssp             CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred             CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence            699999999999999999999999999999999999999999999999999999999999999998           789


Q ss_pred             ccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCeEEEEEeecccceeE
Q 045789           91 NSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSS  170 (206)
Q Consensus        91 ~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~  170 (206)
                      +++|+++||+++|||+++++|++++|++++|||++++.++++.+.+.....    + .+|..+.+++++++++|||+|+|
T Consensus        81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~a~vnsfGfgG~Na~  155 (161)
T d2gfva2          81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH----E-ARQVSGMEYTLCNSFGFGGTNGS  155 (161)
T ss_dssp             ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBS----S-CEECSSCCEEEEEEEEGGGEEEE
T ss_pred             ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccc----c-CccCCCCcEEEEeCcCccceeEE
Confidence            999999999999999999999999999999999999999998876543332    1 22223334555555569999999


Q ss_pred             EEccc
Q 045789          171 LYMAS  175 (206)
Q Consensus       171 ~vl~~  175 (206)
                      +||++
T Consensus       156 lil~~  160 (161)
T d2gfva2         156 LIFKK  160 (161)
T ss_dssp             EEEEC
T ss_pred             EEEEE
Confidence            99985

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=100.00  E-value=4.7e-39  Score=250.03  Aligned_cols=149  Identities=32%  Similarity=0.457  Sum_probs=134.6

Q ss_pred             ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc--------ceeccc
Q 045789           22 NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA--------LRMNST   93 (206)
Q Consensus        22 ~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a--------~~v~s~   93 (206)
                      +||++|+|+++++||++.+.++|++.++.++|+++|++++++|+||+|||+|||||+.+|..|..+        ++++++
T Consensus         1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~~~~v~s~   80 (158)
T d1ox0a2           1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKEVPVSST   80 (158)
T ss_dssp             CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCSSSEEECT
T ss_pred             CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCCcccCcCc
Confidence            589999999999999999999999999999999999999999999999999999999999999999        899999


Q ss_pred             cccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCeEEEEEeecccceeEEEc
Q 045789           94 KSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYM  173 (206)
Q Consensus        94 k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl  173 (206)
                      |+++||+++|||++++++++++|++++|||+.|+++++++++++.+..      ++++.+.++.+.++++|||+|+|+||
T Consensus        81 Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~nsfGfGG~Na~lvl  154 (158)
T d1ox0a2          81 KSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYG------QGLEKEIPYAISNTFGFGGHNAVLAF  154 (158)
T ss_dssp             HHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBS------SCEECCCSEEEEEEEETTTEEEEEEE
T ss_pred             ccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcccccC------ccccCCCCEEEEeCcCCCcEeEEEEE
Confidence            999999999999999999999999999999999999999987655443      23333445555555669999999999


Q ss_pred             ccc
Q 045789          174 ASC  176 (206)
Q Consensus       174 ~~~  176 (206)
                      +++
T Consensus       155 ~~~  157 (158)
T d1ox0a2         155 KRW  157 (158)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            975

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=100.00  E-value=1.6e-38  Score=247.71  Aligned_cols=147  Identities=39%  Similarity=0.494  Sum_probs=131.7

Q ss_pred             eEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-------------cee
Q 045789           24 YAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-------------LRM   90 (206)
Q Consensus        24 ~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-------------~~v   90 (206)
                      |++|+|+++++|+.+.+.++|+++.+.++|+++|++++++|+||+|||+|||||+++|++|+.+             ++|
T Consensus         1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i   80 (161)
T d2ix4a2           1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF   80 (161)
T ss_dssp             CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred             CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence            8999999999999999999999999999999999999999999999999999999999999998             679


Q ss_pred             ccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCeEEEEEeecccceeE
Q 045789           91 NSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSS  170 (206)
Q Consensus        91 ~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~  170 (206)
                      +++|+++||+++|||+++++|++++|+++++||++|++++||.++....++.     .+++...++.+.++++|||+|+|
T Consensus        81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~nsfGfgG~Na~  155 (161)
T d2ix4a2          81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLT-----TSKKMLVRTAMSNSFGFGGTNAS  155 (161)
T ss_dssp             ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCS-----SCEECCCSEEEEEEEETTTEEEE
T ss_pred             eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccc-----cCCCCCcCEEEEeCCcccceeEE
Confidence            9999999999999999999999999999999999999999999987766543     12222334455555569999999


Q ss_pred             EEccc
Q 045789          171 LYMAS  175 (206)
Q Consensus       171 ~vl~~  175 (206)
                      +||+.
T Consensus       156 lvl~~  160 (161)
T d2ix4a2         156 LLFAS  160 (161)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            99985

>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.4e-34  Score=220.89  Aligned_cols=141  Identities=30%  Similarity=0.491  Sum_probs=121.8

Q ss_pred             eEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc---------ceecccc
Q 045789           24 YAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA---------LRMNSTK   94 (206)
Q Consensus        24 ~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a---------~~v~s~k   94 (206)
                      |++|+|+++++||.++  +.|+++++.++|+++|+.+   ++||+|||+|||||+.+|.+|..|         ++|+++|
T Consensus         1 Yaei~G~g~~~Dg~~~--taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~~~~v~s~K   75 (151)
T d2vbaa2           1 YAEIVGYGATSDGADM--VAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATK   75 (151)
T ss_dssp             CEEEEEEEEEECCSCT--TSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEECTH
T ss_pred             CEEEEEEEEecCCCCC--CCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCCCcccccch
Confidence            8999999999999764  4677899999999999866   578999999999999999999999         7799999


Q ss_pred             ccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCeEEEEEeecccceeEEEcc
Q 045789           95 SLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMA  174 (206)
Q Consensus        95 ~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~  174 (206)
                      +++||+++|||++++++++++|++++|||++|++++++++.    .+.++.+..+|  +.++++.++++|||+|+|+||+
T Consensus        76 ~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~----~~~v~~~~~~~--~~~~a~~nsfGfGG~Na~~vl~  149 (151)
T d2vbaa2          76 AMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAA----GLNIVTETTDR--ELTTVMSNSFGFGGTNATLVMR  149 (151)
T ss_dssp             HHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCT----TSEECCSCEEC--CCCEEEEEEEETTTEEEEEEEE
T ss_pred             hhccccccchhhhhhhHHHHHHHcCCcccccCccccccccc----cccccCcCcCC--CCCEEEEeCCcccceeEEEEEE
Confidence            99999999999999999999999999999999999988754    23445555555  3345555556699999999998


Q ss_pred             c
Q 045789          175 S  175 (206)
Q Consensus       175 ~  175 (206)
                      +
T Consensus       150 ~  150 (151)
T d2vbaa2         150 K  150 (151)
T ss_dssp             C
T ss_pred             E
Confidence            5

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.83  E-value=1.3e-09  Score=79.34  Aligned_cols=94  Identities=16%  Similarity=0.271  Sum_probs=67.3

Q ss_pred             CCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHh--hhhc----ceeccc
Q 045789           20 GTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLR--EYQA----LRMNST   93 (206)
Q Consensus        20 g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~--E~~a----~~v~s~   93 (206)
                      |-+++|+|.+++...-     .|.-.+.+...+++++|+++|++.+|||+||.|.....+.=..  |..-    +++..-
T Consensus         2 gl~plAri~~~a~~g~-----~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GG   76 (124)
T d1afwa2           2 NLPVLGRYIDFQTVGV-----PPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGG   76 (124)
T ss_dssp             TCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCC
T ss_pred             CCcEEEEEEEEEEEec-----CHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHHHcCCChhhccccCc
Confidence            5689999999987632     2333466779999999999999999999999995544321110  0000    333333


Q ss_pred             cccccccccccchHHHHHHHHHhhh
Q 045789           94 KSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        94 k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      .-.+||+.+|||...++..+..|++
T Consensus        77 aiAlGHP~GaSGarlv~~l~~~L~~  101 (124)
T d1afwa2          77 AIALGHPLGCTGARQVATILRELKK  101 (124)
T ss_dssp             HHHHCBCTTTHHHHHHHHHHHHSCT
T ss_pred             cceecCCcCCchHHHHHHHHHHhcc
Confidence            3347999999999999999888753

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=98.67  E-value=5.9e-09  Score=76.09  Aligned_cols=95  Identities=20%  Similarity=0.326  Sum_probs=67.2

Q ss_pred             CCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCH--hhhhc-------cee
Q 045789           20 GTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL--REYQA-------LRM   90 (206)
Q Consensus        20 g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~--~E~~a-------~~v   90 (206)
                      |.+++++|.+++.....     |.-.+.+...+++++|++++++.+|||+||.|.....+.=.  .|...       +++
T Consensus         1 Gl~pla~i~~~~~~g~d-----P~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~   75 (128)
T d1wdkc2           1 GLEPLAVIRSMAVAGVD-----PAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNL   75 (128)
T ss_dssp             TCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBST
T ss_pred             CCCEEEEEEEEEEEecC-----HHHhccCcHHHHHHHhhhcCccccccceEEeecccchhhhhhhhhcccccCCcceecC
Confidence            56789999999876331     22234566889999999999999999999999654322100  01100       333


Q ss_pred             ccccccccccccccchHHHHHHHHHhhhc
Q 045789           91 NSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        91 ~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      ..-.--+||+.+|||...++..+..|++.
T Consensus        76 ~GGaiAlGHP~GASGaRlv~~l~~~L~~~  104 (128)
T d1wdkc2          76 HGGAIALGHPFGCSGARISGTLLNVMKQN  104 (128)
T ss_dssp             TCCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcccccccccccchhHHHHHHHHHHhc
Confidence            33333479999999999999999999763

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=98.64  E-value=7.3e-09  Score=75.28  Aligned_cols=92  Identities=24%  Similarity=0.312  Sum_probs=64.8

Q ss_pred             ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHh--hhhc------ceeccc
Q 045789           22 NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLR--EYQA------LRMNST   93 (206)
Q Consensus        22 ~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~--E~~a------~~v~s~   93 (206)
                      +++++|.+++.....     |.-.+.+...+++++|+++|++.+|||+||.|.....+.=..  |..-      +++..-
T Consensus         1 KPlA~i~~~~~~g~~-----P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~GG   75 (125)
T d1ulqa2           1 RPLARVRAIAVAGVP-----PRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGG   75 (125)
T ss_dssp             CCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCC
T ss_pred             CCeEEEEEEEEEecC-----HHHHhhccHHHHHhHhhccCcCccccchheeccccchhHHHHHHHhhccCchhhcCCCCC
Confidence            478999999875331     222345668899999999999999999999996554321111  1000      233333


Q ss_pred             cccccccccccchHHHHHHHHHhhh
Q 045789           94 KSLIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        94 k~~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      .--+||+.+|||...++..+..|++
T Consensus        76 aIAlGHP~GASGari~~tl~~~L~~  100 (125)
T d1ulqa2          76 AIALGHPLGASGARILTTLVHEMRR  100 (125)
T ss_dssp             HHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCccccchhHHHHHHHHHHh
Confidence            3347999999999999999999985

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=98.64  E-value=8.3e-09  Score=74.87  Aligned_cols=92  Identities=21%  Similarity=0.252  Sum_probs=65.3

Q ss_pred             ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHh--hhhc----ceeccccc
Q 045789           22 NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLR--EYQA----LRMNSTKS   95 (206)
Q Consensus        22 ~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~--E~~a----~~v~s~k~   95 (206)
                      +++++|.+++....     .|.-.+.+...+++++|+++|++.+|||+||.|.....+.=..  |...    +++..-.-
T Consensus         2 ~Plari~~~a~~g~-----dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~~l~id~~kvN~~GGai   76 (124)
T d1m3ka2           2 QPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAI   76 (124)
T ss_dssp             CCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHH
T ss_pred             CcEEEEEEEEEEec-----ChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeehHhhCCChhhcCCCCCcc
Confidence            57899999987533     1233356678999999999999999999999985544321100  0000    33333333


Q ss_pred             cccccccccchHHHHHHHHHhhh
Q 045789           96 LIGHLLGASGAAEAVATIKAIQT  118 (206)
Q Consensus        96 ~~Gh~~~asG~~~l~~~~l~l~~  118 (206)
                      -+||+.+|||..-++..+..|++
T Consensus        77 AlGHP~GaSGarl~~tl~~~L~~   99 (124)
T d1m3ka2          77 AIGHPIGASGARILNTLLFEMKR   99 (124)
T ss_dssp             HHCCCTTTHHHHHHHHHHHHHHH
T ss_pred             ccccCcCccchhHHHHHHHHHHh
Confidence            47999999999999999998876

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.90  E-value=0.0026  Score=52.76  Aligned_cols=64  Identities=13%  Similarity=0.147  Sum_probs=44.0

Q ss_pred             hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceeccc------cccccccccccchHHH
Q 045789           46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNST------KSLIGHLLGASGAAEA  109 (206)
Q Consensus        46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s~------k~~~Gh~~~asG~~~l  109 (206)
                      .....++++++|+++|++++||+++-.|-.+....|.++-.- ++...+      -..+||+.+||=.+.|
T Consensus       265 ~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L  335 (372)
T d1teda_         265 FSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL  335 (372)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCHHHhhhhhccCccHHHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHH
Confidence            355678899999999999999999999988777666554432 322211      1345888776544433

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.44  E-value=0.014  Score=42.33  Aligned_cols=66  Identities=18%  Similarity=0.229  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec----cccccccccccccchHHHHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN----STKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~----s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      ..+.++++++|+++|++++||+++..|-.+...-|.+.... ++..    ..-..+||+.+|+=.+.|..+
T Consensus        48 ~~v~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a  118 (148)
T d1u6ea2          48 FKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL  118 (148)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHH
Confidence            34457899999999999999999999966665544443322 2211    122345888877666555543

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=93.88  E-value=0.028  Score=40.53  Aligned_cols=61  Identities=20%  Similarity=0.189  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceeccc---cccccccccccchHHHH
Q 045789           50 VSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNST---KSLIGHLLGASGAAEAV  110 (206)
Q Consensus        50 ~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s~---k~~~Gh~~~asG~~~l~  110 (206)
                      .++++++|+++|++++|||++..|-.....-|.+.... ++-.-.   -..+||+.+|+=.+.|.
T Consensus        50 p~~i~~~L~~~g~~~~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~  114 (149)
T d1ub7a2          50 NTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALK  114 (149)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHH
T ss_pred             HHHHHHHHHhhccccccccEEEeeccchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHH
Confidence            46889999999999999999999966655444432211 221111   13468888876555544

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=93.00  E-value=0.027  Score=40.35  Aligned_cols=64  Identities=14%  Similarity=0.228  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec---cccccccccccccchHHHHHH
Q 045789           49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN---STKSLIGHLLGASGAAEAVAT  112 (206)
Q Consensus        49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~---s~k~~~Gh~~~asG~~~l~~~  112 (206)
                      +.++++++|+++|++++||+++-.|-.+...-|.+.-.- ++..   ..-..+||+.+|+=.+.|-.+
T Consensus        46 ~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~  113 (143)
T d1hnja2          46 LAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA  113 (143)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH
T ss_pred             hhHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHH
Confidence            456889999999999999999999977666555542221 2211   122356999888766555443

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=92.60  E-value=0.17  Score=36.37  Aligned_cols=59  Identities=19%  Similarity=0.172  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-cee----ccccccccccccccc
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRM----NSTKSLIGHLLGASG  105 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v----~s~k~~~Gh~~~asG  105 (206)
                      ..+.++++++|+++|++++|||++..|-.+...-|.+.... ++-    ...-..+||+.+||=
T Consensus        48 ~~vp~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasi  111 (153)
T d1mzja2          48 ADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASV  111 (153)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHH
T ss_pred             HHHHHHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhCCCchhcchhhhhhcCCcccchH
Confidence            34556889999999999999999999977766555443322 221    111234677776643

>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=90.63  E-value=0.06  Score=38.70  Aligned_cols=63  Identities=13%  Similarity=0.120  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceeccc------cccccccccccchHHH
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNST------KSLIGHLLGASGAAEA  109 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s~------k~~~Gh~~~asG~~~l  109 (206)
                      ..+..+++++|+++|++++||+++-.|=.+...-|.++-.- ++-..+      -..+||+.+|+=...|
T Consensus        43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L  112 (148)
T d1u0ma2          43 EPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDAL  112 (148)
T ss_dssp             HHHHHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHH
Confidence            55778899999999999999999999977766655554332 332221      1346999888743333

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=86.19  E-value=0.6  Score=34.64  Aligned_cols=69  Identities=16%  Similarity=0.147  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc------ceec-cccc-cccccccccchHHHHHHHHHhhhc
Q 045789           48 GMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA------LRMN-STKS-LIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        48 ~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a------~~v~-s~k~-~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      --.++++++|+++|++|+|||++-.. +.+.  +.....+      +.+. .... .+.+..+++++.+|-.+.-.++.+
T Consensus        78 la~~Aa~~aL~~ag~~~~dId~lI~~-s~t~--~~~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~  154 (200)
T d1u0ma1          78 RVPAVIQRALDDAELLATDIDVIIYV-SCTG--FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAY  154 (200)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEEE-CSSS--CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHcCCChhhhheEEEe-ccCC--CCcchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHHhC
Confidence            34579999999999999999997643 3332  2222222      2111 1111 223444555566666666666665

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=81.89  E-value=3  Score=32.14  Aligned_cols=73  Identities=18%  Similarity=0.193  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHHHcCCCccccccccccC---CCCCcCCHhhhhc----ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789           47 VGMVSCMEKALAKSGVAKEDVNYINAHA---PSTRLGDLREYQA----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG  119 (206)
Q Consensus        47 ~~~~~~~~~al~~Agi~~~dI~~ve~hg---tgt~~~D~~E~~a----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~  119 (206)
                      +--..+++.+|++++|++++||.|..--   .+.......=..+    ++.. +....=+..++||+..+..+...++.|
T Consensus        26 dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~-vp~~tVn~~CaSg~~Ai~~a~~~I~~G  104 (273)
T d1ulqa1          26 DLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVE-VAGCTVNRLCGSGLEAVAQAARAIWAG  104 (273)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTT-CEEEEEECGGGHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCc-cceEEEecccchHHHHHHHHHHHHhcC
Confidence            3345689999999999999999875321   1211111211111    2221 111112567899999999999999877


Q ss_pred             c
Q 045789          120 W  120 (206)
Q Consensus       120 ~  120 (206)
                      .
T Consensus       105 ~  105 (273)
T d1ulqa1         105 E  105 (273)
T ss_dssp             S
T ss_pred             C
Confidence            4