Citrus Sinensis ID: 045849
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 320 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 1.0 | 0.688 | 0.846 | 1e-164 | |
| Q09131 | 464 | Purple acid phosphatase O | yes | no | 1.0 | 0.689 | 0.837 | 1e-163 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | yes | no | 1.0 | 0.683 | 0.790 | 1e-156 | |
| P80366 | 432 | Fe(3+)-Zn(2+) purple acid | N/A | no | 1.0 | 0.740 | 0.743 | 1e-146 | |
| Q38924 | 469 | Fe(3+)-Zn(2+) purple acid | no | no | 1.0 | 0.682 | 0.731 | 1e-142 | |
| Q9SE00 | 473 | Purple acid phosphatase 1 | N/A | no | 1.0 | 0.676 | 0.697 | 1e-135 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.996 | 0.684 | 0.622 | 1e-119 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.990 | 0.680 | 0.609 | 1e-116 | |
| Q93WP4 | 481 | Phosphoenolpyruvate phosp | N/A | no | 0.993 | 0.661 | 0.625 | 1e-114 | |
| Q949Y3 | 475 | Bifunctional purple acid | no | no | 0.993 | 0.669 | 0.595 | 1e-111 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 271/320 (84%), Positives = 294/320 (91%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGD VGKA+IVSWVTVDEPG++ VVYWSENS+ K+ A
Sbjct: 40 MPLDSDVFRVPPGYNAPQQVHITQGDHVGKAMIVSWVTVDEPGSSKVVYWSENSQHKKVA 99
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
G + TY Y+NYTSGYIHHCTIR+LE+NTKYYY VGIG+T R FWF TPPEVGPDVPY+F
Sbjct: 100 RGNIRTYTYFNYTSGYIHHCTIRNLEYNTKYYYEVGIGNTTRSFWFTTPPEVGPDVPYTF 159
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TLTHYERNP KGQ +LFVGDLSYADNYP HDN RWDTWGRFVERS
Sbjct: 160 GLIGDLGQSFDSNRTLTHYERNPIKGQAVLFVGDLSYADNYPNHDNVRWDTWGRFVERST 219
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGET PFKP++ RYHVPY+ASGST FWY IKRAS YIIVL
Sbjct: 220 AYQPWIWTAGNHEIDFAPEIGETKPFKPFTKRYHVPYKASGSTETFWYPIKRASAYIIVL 279
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYGKYTPQYKWLEEELPKVNR+ETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 280 SSYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 339
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V++KVD+VFAGHVHAYERS
Sbjct: 340 FVQHKVDLVFAGHVHAYERS 359
|
Ipomoea batatas (taxid: 4120) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 574 bits (1480), Expect = e-163, Method: Compositional matrix adjust.
Identities = 268/320 (83%), Positives = 299/320 (93%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF VPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPG++ V YWSENS++K+ A
Sbjct: 38 MPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGSSEVHYWSENSDKKKIA 97
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
EGK+ TY+++NY+SG+IHH TIR+LE+ TKYYY VG+G+T RQFWFVTPPE+GPDVPY+F
Sbjct: 98 EGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTF 157
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TL+HYE NPRKGQT+LFVGDLSYADNYP HDN RWD+WGRF ERS
Sbjct: 158 GLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSV 217
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHE F PEIGETVPFKPY+HRYHVPY+AS ST+PFWYSIKRAS +IIVL
Sbjct: 218 AYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVL 277
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
+SYSAYGKYTPQYKWLE+ELPKVNR+ETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 278 ASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 337
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V+YKVDVVFAGHVHAYERS
Sbjct: 338 FVQYKVDVVFAGHVHAYERS 357
|
Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 552 bits (1422), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/320 (79%), Positives = 284/320 (88%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VP GYNAPQQVHITQGD+ GKAVIVSWVT + G+N V+YW ENS +K +A
Sbjct: 43 MPLDSDVFRVPCGYNAPQQVHITQGDVEGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKA 102
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
GK TYK+YNYTSG+IHHC IR+LE++TKYYYV+G+G TER+FWF TPPE+GPDVPY+F
Sbjct: 103 HGKTNTYKFYNYTSGFIHHCPIRNLEYDTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTF 162
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQSYDSN+TLTHYE NP KGQ +LFVGD+SYAD YP HDN RWD+WGRF ERS
Sbjct: 163 GLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTYPDHDNRRWDSWGRFAERST 222
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWT GNHE+DF PEIGE PFKP++HRY PYR+SGST PFWYSIKR YIIVL
Sbjct: 223 AYQPWIWTTGNHELDFAPEIGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVL 282
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
+SYSAYGKYTPQY+WLEEE PKVNR+ETPWLIVLMH+PWYNSY+YHYMEGETMRVMYE W
Sbjct: 283 ASYSAYGKYTPQYQWLEEEFPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAW 342
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 343 FVKYKVDVVFAGHVHAYERS 362
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P80366|PPAF_PHAVU Fe(3+)-Zn(2+) purple acid phosphatase OS=Phaseolus vulgaris PE=1 SV=2 | Back alignment and function description |
|---|
Score = 516 bits (1330), Expect = e-146, Method: Compositional matrix adjust.
Identities = 238/320 (74%), Positives = 281/320 (87%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGDLVG+A+I+SWVT+DEPG++ V YWSE + +K A
Sbjct: 11 MPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIA 70
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+GK+ TY+++NY+SG+IHH TIR L++NTKYYY VG+ +T R+F F+TPP+ G DVPY+F
Sbjct: 71 KGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTF 130
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TL+HYE +P+KGQT+LFVGDLSYAD YP HDN RWDTWGRF ERS
Sbjct: 131 GLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 190
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEI+F PEI ET PFKP+S+RYHVPY AS ST+PFWYSIKRAS +IIVL
Sbjct: 191 AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVL 250
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SS+ AYG+ TPQY WL++EL KV RSETPWLIVLMH+P YNSYN+H+MEGE MR +E W
Sbjct: 251 SSHIAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAW 310
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 311 FVKYKVDVVFAGHVHAYERS 330
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q38924|PPA12_ARATH Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/320 (73%), Positives = 272/320 (85%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPG N+PQQVH+TQG+ G VI+SWVT +PG+ TV YW EN + ++QA
Sbjct: 44 MPLDSDVFEVPPGPNSPQQVHVTQGNHEGNGVIISWVTPVKPGSKTVQYWCENEKSRKQA 103
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
E V TY+++NYTSGYIHHC I LEF+TKYYY +G G R+FWF PP+ GPDVPY+F
Sbjct: 104 EATVNTYRFFNYTSGYIHHCLIDDLEFDTKYYYEIGSGKWSRRFWFFIPPKSGPDVPYTF 163
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQ+YDSN TL+HYE NP KGQ +LFVGDLSYAD YP HDNNRWDTWGRFVERS
Sbjct: 164 GLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYADRYPNHDNNRWDTWGRFVERSV 223
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF P+IGE PFKP+ +RYH P++ASGS +P WYSIKRAS YIIV+
Sbjct: 224 AYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHKASGSISPLWYSIKRASAYIIVM 283
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
S YS+YG YTPQYKWLE+EL VNR+ETPWLIVL+H+P+Y+SY +HYMEGET+RVMYE W
Sbjct: 284 SCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPFYSSYVHHYMEGETLRVMYEQW 343
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 344 FVKYKVDVVFAGHVHAYERS 363
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SE00|PPAF1_IPOBA Purple acid phosphatase 1 OS=Ipomoea batatas GN=PAP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/321 (69%), Positives = 265/321 (82%), Gaps = 1/321 (0%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVT-VDEPGTNTVVYWSENSEQKEQ 59
MP D+DVF VP GYNAPQQVHITQGD G+ VI+SW T D+ G N VVYWSENS+ +++
Sbjct: 47 MPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVVYWSENSKSQKR 106
Query: 60 AEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYS 119
A G V TYKYYNYTS +IHHCTI+ LE++TKYYY +G G +RQFWFVTPP+ GPDVPY
Sbjct: 107 AMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYV 166
Query: 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS 179
FGLIGD+GQ++DSN TLTHYE+N KGQ +LF+GDLSY++ +P HDNNRWDTWGRF ERS
Sbjct: 167 FGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERS 226
Query: 180 AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIV 239
AYQPWIWTAGNHEID+ P+IGE PF P+++RY P+ ASGS P WY+IKRAS +IIV
Sbjct: 227 VAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIV 286
Query: 240 LSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEP 299
LSSYS + KY+PQYKW EL KVNRSETPWLIVL+HAP YNSY HYMEGE MR ++EP
Sbjct: 287 LSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEP 346
Query: 300 WLVKYKVDVVFAGHVHAYERS 320
+ V YKVD+VF+GHVH+YERS
Sbjct: 347 YFVYYKVDIVFSGHVHSYERS 367
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/326 (62%), Positives = 252/326 (77%), Gaps = 7/326 (2%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVT-VDEPGTNTVVYW-----SENS 54
+ + D F P GYN P+QVH+TQGD G+ +IVSWVT ++ G+N V YW S+
Sbjct: 34 IEMSLDTFPSPGGYNTPEQVHLTQGDHDGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVK 93
Query: 55 EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGP 114
K++A +Y++Y+Y+SG++HH TI+ LE++TKY Y VG + RQF F TPP++GP
Sbjct: 94 PAKKRAHASTKSYRFYDYSSGFLHHATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGP 153
Query: 115 DVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR 174
DVPY+FG+IGDLGQ+Y SN TL HY NP KGQ +LF GDLSYAD++P HD +WDTWGR
Sbjct: 154 DVPYTFGIIGDLGQTYASNETLYHYMSNP-KGQAVLFAGDLSYADDHPNHDQRKWDTWGR 212
Query: 175 FVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRAS 234
F+E AAYQP+I+ AGNHEIDF P IGE FKPY+HRY Y+AS ST+P WYS++RAS
Sbjct: 213 FMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRAS 272
Query: 235 VYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMR 294
+IIVLSSYSAYGKYTPQY WLE+EL VNR ETPWLIV++H+PWYNS NYHYMEGE+MR
Sbjct: 273 AHIIVLSSYSAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMR 332
Query: 295 VMYEPWLVKYKVDVVFAGHVHAYERS 320
VM+E WLV KVD+V +GHVHAYERS
Sbjct: 333 VMFESWLVNSKVDLVLSGHVHAYERS 358
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/323 (60%), Positives = 246/323 (76%), Gaps = 6/323 (1%)
Query: 3 LDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVT-VDEPGTNTVVYWS----ENSEQK 57
+ + F P G+NAP+QVHI QGD G+ +I+SWVT ++ G+N V YW + +K
Sbjct: 37 MSLETFPSPAGHNAPEQVHIVQGDYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKK 96
Query: 58 EQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVP 117
++ +Y++Y+YTSG++HH TI+ LE++TKY Y VG + RQF F +PP+VGPDVP
Sbjct: 97 KRGHASTSSYRFYDYTSGFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVP 156
Query: 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVE 177
Y+FG+IGDLGQ+ SN TL HY NP KGQ +LF GDLSYAD++P HD +WD+WGRFVE
Sbjct: 157 YTFGIIGDLGQTLASNETLYHYMSNP-KGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVE 215
Query: 178 RSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYI 237
AAYQ +I+ AGNHEIDF P IGE FKPY HRYH Y+AS S +P WYSI+RAS +I
Sbjct: 216 PCAAYQTFIYAAGNHEIDFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHI 275
Query: 238 IVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMY 297
IVLSSYSAYGKYTPQY WLE+EL KVNR ETPWLIV++H+PWYNS NYHYMEGE+MR M+
Sbjct: 276 IVLSSYSAYGKYTPQYVWLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMF 335
Query: 298 EPWLVKYKVDVVFAGHVHAYERS 320
E W V KVD+V +GHVH+YERS
Sbjct: 336 ESWFVNSKVDLVLSGHVHSYERS 358
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/320 (62%), Positives = 247/320 (77%), Gaps = 2/320 (0%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
+P+D+ F VP +PQQVHITQGD GKAVIVSWVT +PG + VVY + + A
Sbjct: 44 IPIDSKEFAVPKNQFSPQQVHITQGDYDGKAVIVSWVTFIDPGKSEVVYGTSPNSYDHSA 103
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+GK Y YY+YTSGYIHHC + LE++TKYYY +G G R+FWF TPP++ PD Y+F
Sbjct: 104 QGKTTNYTYYDYTSGYIHHCLLDKLEYDTKYYYKIGKGDAAREFWFHTPPQIHPDASYTF 163
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
G+IGDLGQ+Y+S TL HY ++ KGQT+LFVGDLSYAD Y C++ RWD+WGRFVERS
Sbjct: 164 GIIGDLGQTYNSLSTLEHYMKS--KGQTVLFVGDLSYADRYSCNNGTRWDSWGRFVERSV 221
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWT GNHEI++ P++GE PF+ Y +RY P+ AS S++P WYSI+RAS +IIVL
Sbjct: 222 AYQPWIWTVGNHEIEYRPDLGEVFPFRAYLNRYPTPHLASASSSPLWYSIRRASAHIIVL 281
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYS + KYTPQ+ WL EEL +V+R +TPWLIVLMHAP YNS HYMEGE+MRV +E W
Sbjct: 282 SSYSPFVKYTPQWLWLSEELTRVDREKTPWLIVLMHAPLYNSNEAHYMEGESMRVAFESW 341
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V+YKVD+VFAGHVHAYERS
Sbjct: 342 FVQYKVDLVFAGHVHAYERS 361
|
Phosphoenolpyruvate phosphatase that probably operates in the vacuole to release phosphate from phosphoenolpyruvate (PEP) under phosphorus starvation. Allium cepa (taxid: 4679) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 0 |
| >sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/321 (59%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
+PLD VF+VP GYNAPQQVHITQGD GKAVI+SWVT DEPG++ V Y + + + A
Sbjct: 38 IPLDHHVFKVPKGYNAPQQVHITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVA 97
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+G + Y +Y Y SG+IHHC + LE +TKYYY + G + R+FWFVTPP V PD Y F
Sbjct: 98 QGTYHNYTFYKYKSGFIHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKF 157
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNN-RWDTWGRFVERS 179
G+IGD+GQ+++S TL HY + Q +LF+GDLSYAD Y +D RWD+WGRFVERS
Sbjct: 158 GIIGDMGQTFNSLSTLEHYMES--GAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERS 215
Query: 180 AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIV 239
AYQPW+W+AGNHE+D+ P +GE PF+ Y RY PY AS S++P WY+++RAS +IIV
Sbjct: 216 TAYQPWLWSAGNHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIV 275
Query: 240 LSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEP 299
LSSYS + KYTPQ+ WL EEL +V+R +TPWLIVLMH P YNS H+MEGE+MR +E
Sbjct: 276 LSSYSPFVKYTPQWHWLSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEE 335
Query: 300 WLVKYKVDVVFAGHVHAYERS 320
W V++KVDV+FAGHVHAYERS
Sbjct: 336 WFVQHKVDVIFAGHVHAYERS 356
|
Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: . EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 320 | ||||||
| 224103361 | 426 | predicted protein [Populus trichocarpa] | 1.0 | 0.751 | 0.875 | 1e-168 | |
| 225427698 | 472 | PREDICTED: purple acid phosphatase 2 iso | 1.0 | 0.677 | 0.868 | 1e-166 | |
| 224080395 | 468 | predicted protein [Populus trichocarpa] | 1.0 | 0.683 | 0.862 | 1e-166 | |
| 255543799 | 467 | Purple acid phosphatase precursor, putat | 1.0 | 0.685 | 0.865 | 1e-165 | |
| 359806067 | 464 | uncharacterized protein LOC100807555 pre | 1.0 | 0.689 | 0.846 | 1e-164 | |
| 225427706 | 472 | PREDICTED: purple acid phosphatase 2 iso | 1.0 | 0.677 | 0.856 | 1e-164 | |
| 27597229 | 470 | purple acid phosphatase [Nicotiana tabac | 1.0 | 0.680 | 0.85 | 1e-164 | |
| 4160280 | 465 | purple acid phosphatase [Ipomoea batatas | 1.0 | 0.688 | 0.85 | 1e-163 | |
| 297744759 | 426 | unnamed protein product [Vitis vinifera] | 1.0 | 0.751 | 0.856 | 1e-163 | |
| 75265719 | 465 | RecName: Full=Purple acid phosphatase 2; | 1.0 | 0.688 | 0.846 | 1e-162 |
| >gi|224103361|ref|XP_002313026.1| predicted protein [Populus trichocarpa] gi|222849434|gb|EEE86981.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/320 (87%), Positives = 299/320 (93%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGD VGKAVIVSWVT +EPG+ V+YWSENSE KE+A
Sbjct: 1 MPLDSDVFRVPPGYNAPQQVHITQGDHVGKAVIVSWVTANEPGSKKVIYWSENSEHKEEA 60
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
KVYTYK+YNYTSGYIHHCTIR+LEFNTKYYYVVG+GHTER+FWF TPP VGPDVPY+F
Sbjct: 61 NSKVYTYKFYNYTSGYIHHCTIRNLEFNTKYYYVVGVGHTERKFWFTTPPAVGPDVPYTF 120
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQSYDSN TLTHYE+NP KGQ +LFVGDLSYADNY HDN RWDTWGRFVERS
Sbjct: 121 GLIGDLGQSYDSNTTLTHYEKNPTKGQAVLFVGDLSYADNYSNHDNVRWDTWGRFVERSV 180
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGET PFKP++HRYHVPYRAS STAPFWYSIKRAS YI+VL
Sbjct: 181 AYQPWIWTAGNHEIDFAPEIGETKPFKPFTHRYHVPYRASQSTAPFWYSIKRASAYIVVL 240
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYGKYTPQYKWLE+ELPKVNRSETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 241 SSYSAYGKYTPQYKWLEQELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 300
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V+YKVDVVFAGHVHAYERS
Sbjct: 301 FVQYKVDVVFAGHVHAYERS 320
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225427698|ref|XP_002263937.1| PREDICTED: purple acid phosphatase 2 isoform 1 [Vitis vinifera] gi|297744760|emb|CBI38022.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 278/320 (86%), Positives = 301/320 (94%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VP GYNAPQQVHITQGD G+ VIVSWVTVDEPG+NTV+YWSENS++K +A
Sbjct: 47 MPLDSDVFRVPLGYNAPQQVHITQGDHEGRGVIVSWVTVDEPGSNTVLYWSENSKRKNRA 106
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
EG + TYK+YNYTSGYIHHCTI++LEFNTKYYYVVGIGHT R+FWFVTPP+VGPDVPY+F
Sbjct: 107 EGIMVTYKFYNYTSGYIHHCTIKNLEFNTKYYYVVGIGHTPRKFWFVTPPKVGPDVPYTF 166
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQSYDSN+TLTHYE NP KG+T+LFVGDLSYADNYP HDN RWDTWGRF ERS
Sbjct: 167 GLIGDLGQSYDSNMTLTHYELNPAKGKTVLFVGDLSYADNYPNHDNVRWDTWGRFTERST 226
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGE +PFKPYSHRYHVPYRAS STAPFWYSIKRAS YIIVL
Sbjct: 227 AYQPWIWTAGNHEIDFVPEIGEFIPFKPYSHRYHVPYRASDSTAPFWYSIKRASAYIIVL 286
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
+SYSAYGKYTPQYKWLE+ELPKVNRSETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 287 ASYSAYGKYTPQYKWLEKELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 346
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V+YKVDVVFAGHVHAYERS
Sbjct: 347 FVQYKVDVVFAGHVHAYERS 366
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224080395|ref|XP_002306126.1| predicted protein [Populus trichocarpa] gi|222849090|gb|EEE86637.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 276/320 (86%), Positives = 299/320 (93%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGD VGK VIVSWVT DE G+NTV+YWSE+S+QK++A
Sbjct: 43 MPLDSDVFKVPPGYNAPQQVHITQGDHVGKGVIVSWVTADESGSNTVIYWSESSKQKKEA 102
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
EGK YTYK+YNYTSGYIHHC IR+LEFNTKYYYVVG+G+T RQFWF+TPP VGPDVPY+F
Sbjct: 103 EGKTYTYKFYNYTSGYIHHCIIRNLEFNTKYYYVVGVGNTTRQFWFITPPAVGPDVPYTF 162
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQ+YDSN TLTHYE NP KGQ +LFVGDLSYADNYP HDN RWDTWGRFVERS
Sbjct: 163 GLIGDLGQTYDSNRTLTHYENNPAKGQAVLFVGDLSYADNYPNHDNVRWDTWGRFVERSV 222
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF P+IGET PFKPY+HRYHVPYRA+ STAPFWYSIKRAS YIIVL
Sbjct: 223 AYQPWIWTAGNHEIDFAPDIGETKPFKPYTHRYHVPYRAAQSTAPFWYSIKRASAYIIVL 282
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYGKYTPQY+WLEEELPKVNRSETPWL+VL+H+PWYNSY YHYMEGETMRVMYEPW
Sbjct: 283 SSYSAYGKYTPQYQWLEEELPKVNRSETPWLVVLIHSPWYNSYEYHYMEGETMRVMYEPW 342
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 343 FVKYKVDVVFAGHVHAYERS 362
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255543799|ref|XP_002512962.1| Purple acid phosphatase precursor, putative [Ricinus communis] gi|223547973|gb|EEF49465.1| Purple acid phosphatase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 277/320 (86%), Positives = 297/320 (92%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVFQVPPGYNAPQQVHITQGD GKAVIVSWVT DEPG++ V+YWS++S K+QA
Sbjct: 42 MPLDSDVFQVPPGYNAPQQVHITQGDHDGKAVIVSWVTEDEPGSSNVLYWSKSSPHKKQA 101
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+GK TYK+YNYTSGYIHHCTIR+LE+NTKYYY VGIGHT RQFWFVTPP VGPDVPY+F
Sbjct: 102 KGKYTTYKFYNYTSGYIHHCTIRNLEYNTKYYYAVGIGHTTRQFWFVTPPAVGPDVPYTF 161
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TLTHYE NP+KGQT+LFVGDLSYADNYP HDN RWDTWGRF ERS
Sbjct: 162 GLIGDLGQSFDSNKTLTHYEMNPQKGQTVLFVGDLSYADNYPNHDNVRWDTWGRFTERSI 221
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGET PFKPY+HRYHVPY+ASGST PFWYSIKRAS YIIVL
Sbjct: 222 AYQPWIWTAGNHEIDFAPEIGETKPFKPYTHRYHVPYKASGSTTPFWYSIKRASAYIIVL 281
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYGKYTPQY+WLEEE PKVNR+ETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 282 SSYSAYGKYTPQYEWLEEEFPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 341
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 342 FVKYKVDVVFAGHVHAYERS 361
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359806067|ref|NP_001240926.1| uncharacterized protein LOC100807555 precursor [Glycine max] gi|304421394|gb|ADM32496.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 271/320 (84%), Positives = 301/320 (94%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF +PPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPG++ V YWSENS+QK+
Sbjct: 38 MPLDSDVFAIPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGSSEVRYWSENSDQKKIV 97
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
EGK+ TY+++NYTSG+IHH TIR+LE+NTKYYY VG+G+T RQFWFVTPPE+GPDVPY+F
Sbjct: 98 EGKLVTYRFFNYTSGFIHHTTIRNLEYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTF 157
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TL+HYE NPRKGQT+LFVGDLSYADNYP HDN RWD+WGRF ERS
Sbjct: 158 GLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSV 217
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGETVPFKPY+HRYHVPY+AS ST+PFWYSIKRAS +IIVL
Sbjct: 218 AYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVL 277
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
+SYSAYGKYTPQYKWLE+ELPKVNR+ETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 278 ASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 337
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V+YKVDVVFAGHVHAYERS
Sbjct: 338 FVQYKVDVVFAGHVHAYERS 357
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225427706|ref|XP_002264113.1| PREDICTED: purple acid phosphatase 2 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust.
Identities = 274/320 (85%), Positives = 298/320 (93%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VP GYNAPQQVHITQGD G+ VIVSWVTVDEPG+NTV+YWSE S++K +A
Sbjct: 47 MPLDSDVFRVPLGYNAPQQVHITQGDHEGRGVIVSWVTVDEPGSNTVLYWSEKSKRKNRA 106
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
EG + TYK+YNYTSGYIHHCTI++LEFNTKYYYVVGIGHT R+FWFVTPP+VGPDVPY+F
Sbjct: 107 EGIMVTYKFYNYTSGYIHHCTIKNLEFNTKYYYVVGIGHTPRKFWFVTPPKVGPDVPYTF 166
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQSYDSN+TLTHYE NP KG+T+LFVGDLSYAD YP +DN RWDTWGRF ERS
Sbjct: 167 GLIGDLGQSYDSNMTLTHYELNPAKGKTVLFVGDLSYADRYPNYDNVRWDTWGRFTERST 226
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGE +PFKPYSHRYHVPYRAS STAPFWYSIKRAS YIIVL
Sbjct: 227 AYQPWIWTAGNHEIDFAPEIGEFIPFKPYSHRYHVPYRASDSTAPFWYSIKRASAYIIVL 286
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYGKYTPQ+ WLE+ELPKVNRSETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 287 SSYSAYGKYTPQFMWLEKELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 346
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V+YKVDVVFAGHVHAYERS
Sbjct: 347 FVQYKVDVVFAGHVHAYERS 366
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|27597229|dbj|BAC55155.1| purple acid phosphatase [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust.
Identities = 272/320 (85%), Positives = 294/320 (91%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+ PPGYNAPQQVHITQGD GK VIVSWVT+DEPG++TV+YWSE S+QK A
Sbjct: 45 MPLDSDVFRAPPGYNAPQQVHITQGDHEGKTVIVSWVTMDEPGSSTVLYWSEKSKQKNTA 104
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+GKV TYK+YNYTSGYIHH TIRHLEFNTKYYY +G+GHT R FWFVTPP VGPDVPY+F
Sbjct: 105 KGKVTTYKFYNYTSGYIHHSTIRHLEFNTKYYYKIGVGHTARTFWFVTPPPVGPDVPYTF 164
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TLTHYE NP KGQ +LFVGDLSYADNYP HDN RWDTWGRFVERS
Sbjct: 165 GLIGDLGQSFDSNKTLTHYELNPTKGQAVLFVGDLSYADNYPNHDNVRWDTWGRFVERST 224
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGET PFKPY+HRYHVPYRAS ST+P WYS+KRAS YIIVL
Sbjct: 225 AYQPWIWTAGNHEIDFAPEIGETKPFKPYTHRYHVPYRASNSTSPLWYSVKRASAYIIVL 284
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYGKYTPQYKWLEEELPKVNR+ETPWLIVL+H+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 285 SSYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLVHSPWYNSYNYHYMEGETMRVMYEPW 344
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVD+VFAGHVHAYER+
Sbjct: 345 FVKYKVDIVFAGHVHAYERT 364
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4160280|emb|CAA06921.1| purple acid phosphatase [Ipomoea batatas] | Back alignment and taxonomy information |
|---|
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 272/320 (85%), Positives = 296/320 (92%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGD VGKA+IVSWVTVDEPG++ VVYWSENS+ K+ A
Sbjct: 40 MPLDSDVFRVPPGYNAPQQVHITQGDHVGKAMIVSWVTVDEPGSSKVVYWSENSQHKKVA 99
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+G + TY Y+NYTSGYIHHCTIR+LE+NTKYYY VGIG+T R FWF TPPEVGPDVPY+F
Sbjct: 100 KGNIRTYTYFNYTSGYIHHCTIRNLEYNTKYYYEVGIGNTTRSFWFTTPPEVGPDVPYTF 159
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TLTHYERNP KGQ +LFVGDLSYADNYP HDN RWDTWGRFVERS
Sbjct: 160 GLIGDLGQSFDSNRTLTHYERNPIKGQAVLFVGDLSYADNYPNHDNVRWDTWGRFVERST 219
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGET PFKP++ RYHVPY+ASGST FWYSIKRAS YIIVL
Sbjct: 220 AYQPWIWTAGNHEIDFAPEIGETKPFKPFTKRYHVPYKASGSTETFWYSIKRASAYIIVL 279
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYGKYTPQYKWLEEELPKVNR+ETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 280 SSYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 339
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V++KVD+VFAGHVHAYERS
Sbjct: 340 FVQHKVDLVFAGHVHAYERS 359
|
Source: Ipomoea batatas Species: Ipomoea batatas Genus: Ipomoea Family: Convolvulaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297744759|emb|CBI38021.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 274/320 (85%), Positives = 298/320 (93%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VP GYNAPQQVHITQGD G+ VIVSWVTVDEPG+NTV+YWSE S++K +A
Sbjct: 1 MPLDSDVFRVPLGYNAPQQVHITQGDHEGRGVIVSWVTVDEPGSNTVLYWSEKSKRKNRA 60
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
EG + TYK+YNYTSGYIHHCTI++LEFNTKYYYVVGIGHT R+FWFVTPP+VGPDVPY+F
Sbjct: 61 EGIMVTYKFYNYTSGYIHHCTIKNLEFNTKYYYVVGIGHTPRKFWFVTPPKVGPDVPYTF 120
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQSYDSN+TLTHYE NP KG+T+LFVGDLSYAD YP +DN RWDTWGRF ERS
Sbjct: 121 GLIGDLGQSYDSNMTLTHYELNPAKGKTVLFVGDLSYADRYPNYDNVRWDTWGRFTERST 180
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGE +PFKPYSHRYHVPYRAS STAPFWYSIKRAS YIIVL
Sbjct: 181 AYQPWIWTAGNHEIDFAPEIGEFIPFKPYSHRYHVPYRASDSTAPFWYSIKRASAYIIVL 240
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYGKYTPQ+ WLE+ELPKVNRSETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 241 SSYSAYGKYTPQFMWLEKELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 300
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V+YKVDVVFAGHVHAYERS
Sbjct: 301 FVQYKVDVVFAGHVHAYERS 320
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75265719|sp|Q9SDZ9.1|PPAF2_IPOBA RecName: Full=Purple acid phosphatase 2; AltName: Full=Manganese(II) purple acid phosphatase 2; Flags: Precursor gi|6635443|gb|AAF19822.1|AF200826_1 purple acid phosphatase precursor [Ipomoea batatas] | Back alignment and taxonomy information |
|---|
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 271/320 (84%), Positives = 294/320 (91%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGD VGKA+IVSWVTVDEPG++ VVYWSENS+ K+ A
Sbjct: 40 MPLDSDVFRVPPGYNAPQQVHITQGDHVGKAMIVSWVTVDEPGSSKVVYWSENSQHKKVA 99
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
G + TY Y+NYTSGYIHHCTIR+LE+NTKYYY VGIG+T R FWF TPPEVGPDVPY+F
Sbjct: 100 RGNIRTYTYFNYTSGYIHHCTIRNLEYNTKYYYEVGIGNTTRSFWFTTPPEVGPDVPYTF 159
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TLTHYERNP KGQ +LFVGDLSYADNYP HDN RWDTWGRFVERS
Sbjct: 160 GLIGDLGQSFDSNRTLTHYERNPIKGQAVLFVGDLSYADNYPNHDNVRWDTWGRFVERST 219
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF PEIGET PFKP++ RYHVPY+ASGST FWY IKRAS YIIVL
Sbjct: 220 AYQPWIWTAGNHEIDFAPEIGETKPFKPFTKRYHVPYKASGSTETFWYPIKRASAYIIVL 279
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYGKYTPQYKWLEEELPKVNR+ETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 280 SSYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 339
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V++KVD+VFAGHVHAYERS
Sbjct: 340 FVQHKVDLVFAGHVHAYERS 359
|
Source: Ipomoea batatas Species: Ipomoea batatas Genus: Ipomoea Family: Convolvulaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 320 | ||||||
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 1.0 | 0.689 | 0.812 | 9.8e-151 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 1.0 | 0.683 | 0.756 | 7.5e-144 | |
| TAIR|locus:2005533 | 469 | PAP12 "AT2G27190" [Arabidopsis | 1.0 | 0.682 | 0.703 | 3.1e-131 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.990 | 0.680 | 0.611 | 6.1e-110 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.990 | 0.680 | 0.591 | 1.5e-106 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.993 | 0.669 | 0.576 | 5.3e-104 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.609 | 0.442 | 0.739 | 6.8e-98 | |
| TAIR|locus:2075341 | 388 | PAP19 "purple acid phosphatase | 0.221 | 0.182 | 0.763 | 6.7e-70 | |
| TAIR|locus:2011501 | 396 | PAP5 "purple acid phosphatase | 0.825 | 0.666 | 0.485 | 1.9e-67 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.9 | 0.663 | 0.411 | 1.5e-53 |
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 1471 (522.9 bits), Expect = 9.8e-151, P = 9.8e-151
Identities = 260/320 (81%), Positives = 285/320 (89%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF VPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPG++ V YWSENS++K+ A
Sbjct: 38 MPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGSSEVHYWSENSDKKKIA 97
Query: 61 EXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
E IHH TIR+LE+ TKYYY VG+G+T RQFWFVTPPE+GPDVPY+F
Sbjct: 98 EGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTF 157
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TL+HYE NPRKGQT+LFVGDLSYADNYP HDN RWD+WGRF ERS
Sbjct: 158 GLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSV 217
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHE F PEIGETVPFKPY+HRYHVPY+AS ST+PFWYSIKRAS +IIVL
Sbjct: 218 AYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVL 277
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
+SYSAYGKYTPQYKWLE+ELPKVNR+ETPWLIVLMH+PWYNSYNYHYMEGETMRVMYEPW
Sbjct: 278 ASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPW 337
Query: 301 LVKYKVDVVFAGHVHAYERS 320
V+YKVDVVFAGHVHAYERS
Sbjct: 338 FVQYKVDVVFAGHVHAYERS 357
|
|
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1406 (500.0 bits), Expect = 7.5e-144, P = 7.5e-144
Identities = 242/320 (75%), Positives = 271/320 (84%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VP GYNAPQQVHITQGD+ GKAVIVSWVT + G+N V+YW ENS +K +A
Sbjct: 43 MPLDSDVFRVPCGYNAPQQVHITQGDVEGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKA 102
Query: 61 EXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
IHHC IR+LE++TKYYYV+G+G TER+FWF TPPE+GPDVPY+F
Sbjct: 103 HGKTNTYKFYNYTSGFIHHCPIRNLEYDTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTF 162
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQSYDSN+TLTHYE NP KGQ +LFVGD+SYAD YP HDN RWD+WGRF ERS
Sbjct: 163 GLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTYPDHDNRRWDSWGRFAERST 222
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWT GNHE+DF PEIGE PFKP++HRY PYR+SGST PFWYSIKR YIIVL
Sbjct: 223 AYQPWIWTTGNHELDFAPEIGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVL 282
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
+SYSAYGKYTPQY+WLEEE PKVNR+ETPWLIVLMH+PWYNSY+YHYMEGETMRVMYE W
Sbjct: 283 ASYSAYGKYTPQYQWLEEEFPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAW 342
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 343 FVKYKVDVVFAGHVHAYERS 362
|
|
| TAIR|locus:2005533 PAP12 "AT2G27190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 225/320 (70%), Positives = 260/320 (81%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPG N+PQQVH+TQG+ G VI+SWVT +PG+ TV YW EN + ++QA
Sbjct: 44 MPLDSDVFEVPPGPNSPQQVHVTQGNHEGNGVIISWVTPVKPGSKTVQYWCENEKSRKQA 103
Query: 61 EXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
E IHHC I LEF+TKYYY +G G R+FWF PP+ GPDVPY+F
Sbjct: 104 EATVNTYRFFNYTSGYIHHCLIDDLEFDTKYYYEIGSGKWSRRFWFFIPPKSGPDVPYTF 163
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQ+YDSN TL+HYE NP KGQ +LFVGDLSYAD YP HDNNRWDTWGRFVERS
Sbjct: 164 GLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYADRYPNHDNNRWDTWGRFVERSV 223
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEIDF P+IGE PFKP+ +RYH P++ASGS +P WYSIKRAS YIIV+
Sbjct: 224 AYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHKASGSISPLWYSIKRASAYIIVM 283
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
S YS+YG YTPQYKWLE+EL VNR+ETPWLIVL+H+P+Y+SY +HYMEGET+RVMYE W
Sbjct: 284 SCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPFYSSYVHHYMEGETLRVMYEQW 343
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 344 FVKYKVDVVFAGHVHAYERS 363
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 198/324 (61%), Positives = 240/324 (74%)
Query: 3 LDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVT-VDEPGTNTVVYW-----SENSEQ 56
+ D F P GYN P+QVH+TQGD G+ +IVSWVT ++ G+N V YW S+
Sbjct: 36 MSLDTFPSPGGYNTPEQVHLTQGDHDGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPA 95
Query: 57 KEQAEXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDV 116
K++A +HH TI+ LE++TKY Y VG + RQF F TPP++GPDV
Sbjct: 96 KKRAHASTKSYRFYDYSSGFLHHATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDV 155
Query: 117 PYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFV 176
PY+FG+IGDLGQ+Y SN TL HY NP KGQ +LF GDLSYAD++P HD +WDTWGRF+
Sbjct: 156 PYTFGIIGDLGQTYASNETLYHYMSNP-KGQAVLFAGDLSYADDHPNHDQRKWDTWGRFM 214
Query: 177 ERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVY 236
E AAYQP+I+ AGNHEIDF P IGE FKPY+HRY Y+AS ST+P WYS++RAS +
Sbjct: 215 EPCAAYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAH 274
Query: 237 IIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVM 296
IIVLSSYSAYGKYTPQY WLE+EL VNR ETPWLIV++H+PWYNS NYHYMEGE+MRVM
Sbjct: 275 IIVLSSYSAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVM 334
Query: 297 YEPWLVKYKVDVVFAGHVHAYERS 320
+E WLV KVD+V +GHVHAYERS
Sbjct: 335 FESWLVNSKVDLVLSGHVHAYERS 358
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 191/323 (59%), Positives = 235/323 (72%)
Query: 3 LDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVT-VDEPGTNTVVYWS----ENSEQK 57
+ + F P G+NAP+QVHI QGD G+ +I+SWVT ++ G+N V YW + +K
Sbjct: 37 MSLETFPSPAGHNAPEQVHIVQGDYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKK 96
Query: 58 EQAEXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVP 117
++ +HH TI+ LE++TKY Y VG + RQF F +PP+VGPDVP
Sbjct: 97 KRGHASTSSYRFYDYTSGFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVP 156
Query: 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVE 177
Y+FG+IGDLGQ+ SN TL HY NP KGQ +LF GDLSYAD++P HD +WD+WGRFVE
Sbjct: 157 YTFGIIGDLGQTLASNETLYHYMSNP-KGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVE 215
Query: 178 RSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYI 237
AAYQ +I+ AGNHEIDF P IGE FKPY HRYH Y+AS S +P WYSI+RAS +I
Sbjct: 216 PCAAYQTFIYAAGNHEIDFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHI 275
Query: 238 IVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMY 297
IVLSSYSAYGKYTPQY WLE+EL KVNR ETPWLIV++H+PWYNS NYHYMEGE+MR M+
Sbjct: 276 IVLSSYSAYGKYTPQYVWLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMF 335
Query: 298 EPWLVKYKVDVVFAGHVHAYERS 320
E W V KVD+V +GHVH+YERS
Sbjct: 336 ESWFVNSKVDLVLSGHVHSYERS 358
|
|
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 185/321 (57%), Positives = 232/321 (72%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
+PLD VF+VP GYNAPQQVHITQGD GKAVI+SWVT DEPG++ V Y + + + A
Sbjct: 38 IPLDHHVFKVPKGYNAPQQVHITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVA 97
Query: 61 EXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+ IHHC + LE +TKYYY + G + R+FWFVTPP V PD Y F
Sbjct: 98 QGTYHNYTFYKYKSGFIHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKF 157
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNN-RWDTWGRFVERS 179
G+IGD+GQ+++S TL HY + Q +LF+GDLSYAD Y +D RWD+WGRFVERS
Sbjct: 158 GIIGDMGQTFNSLSTLEHYMESG--AQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERS 215
Query: 180 AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIV 239
AYQPW+W+AGNHE+D+ P +GE PF+ Y RY PY AS S++P WY+++RAS +IIV
Sbjct: 216 TAYQPWLWSAGNHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIV 275
Query: 240 LSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEP 299
LSSYS + KYTPQ+ WL EEL +V+R +TPWLIVLMH P YNS H+MEGE+MR +E
Sbjct: 276 LSSYSPFVKYTPQWHWLSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEE 335
Query: 300 WLVKYKVDVVFAGHVHAYERS 320
W V++KVDV+FAGHVHAYERS
Sbjct: 336 WFVQHKVDVIFAGHVHAYERS 356
|
|
| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 809 (289.8 bits), Expect = 6.8e-98, Sum P(2) = 6.8e-98
Identities = 145/196 (73%), Positives = 165/196 (84%)
Query: 125 DLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP 184
DLGQ+Y SN TL +Y NP KGQ +LFVGDLSYAD++P HD +WD++GRFVE SAAYQP
Sbjct: 145 DLGQTYASNQTLYNYMSNP-KGQAVLFVGDLSYADDHPNHDQRKWDSYGRFVEPSAAYQP 203
Query: 185 WIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYS 244
W W AGN+EID+ I ET PFKPY +RYHVPY+AS ST+P WYSIKRAS YIIVLSSYS
Sbjct: 204 WSWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQSTSPLWYSIKRASTYIIVLSSYS 263
Query: 245 AYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY 304
AY KYTPQ WL++EL KVNRSET WLIVL+HAPWYNS NYHYMEGE+MRV +EPW V+
Sbjct: 264 AYDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVEN 323
Query: 305 KVDVVFAGHVHAYERS 320
KVD+VFAGHVHAYERS
Sbjct: 324 KVDIVFAGHVHAYERS 339
|
|
| TAIR|locus:2075341 PAP19 "purple acid phosphatase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 304 (112.1 bits), Expect = 6.7e-70, Sum P(3) = 6.7e-70
Identities = 55/72 (76%), Positives = 63/72 (87%)
Query: 249 YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDV 308
Y+P + L +EL KVNRSETPWLIVL+HAPWYNS NYHYMEGE+MRV +EPW V+ KVD+
Sbjct: 212 YSPLTQ-LMDELKKVNRSETPWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVENKVDI 270
Query: 309 VFAGHVHAYERS 320
VFAGHVHAYERS
Sbjct: 271 VFAGHVHAYERS 282
|
|
| TAIR|locus:2011501 PAP5 "purple acid phosphatase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 137/282 (48%), Positives = 180/282 (63%)
Query: 3 LDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVT-VDEPGTNTVVYWSENSEQKEQAE 61
+ + F P GYNAP+QVHITQGD G+ +I+SWVT ++E G+N V YW +S+ +
Sbjct: 1 MSLETFPPPAGYNAPEQVHITQGDHNGRGMIISWVTSLNEDGSNVVTYWIASSDGSDNKS 60
Query: 62 XXXXXXXXXXXXXXX--IHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYS 119
+HH I+ LE+ TKY+Y +G G + RQF +TPP+VGPDVPY+
Sbjct: 61 VIATTSSYRYFDYTSGYLHHAIIKELEYKTKYFYELGTGRSTRQF-NLTPPKVGPDVPYT 119
Query: 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS 179
FG+IGDLGQ+Y SN TL +Y NP KGQ +LF GDLSYAD++P HD ++WD++GRFVE S
Sbjct: 120 FGVIGDLGQTYASNQTLYNYMSNP-KGQAVLFAGDLSYADDHPNHDQSKWDSYGRFVEPS 178
Query: 180 AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGST-AP--FWYS-----IK 231
AAYQPWIW AGNHEID+ IGET PFKPY +RYHVPYRAS + P W +
Sbjct: 179 AAYQPWIWAAGNHEIDYAQSIGETQPFKPYKNRYHVPYRASQNKYTPQNSWLQDEFKKVN 238
Query: 232 RASV-YIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLI 272
R+ ++IVL Y + Y ++E E +V PW +
Sbjct: 239 RSETPWLIVLVHAPWYN--SNNYHYMEGESMRVTFE--PWFV 276
|
|
| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 125/304 (41%), Positives = 174/304 (57%)
Query: 17 PQQVHITQGDLVGKAVI-VSWVTVDEPGTNTVVYWSENSEQKEQAEXXXXXXXXXXXXXX 75
PQQVHI+ L GK + V+++T D + V Y + + +A
Sbjct: 47 PQQVHIS---LAGKDHMRVTFITEDNKVESVVEYGKQPGKYDGKATGECTSYKYFFYKSG 103
Query: 76 XIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVT 135
IHH I L+ NT YYY G G+ +F F TPP P F ++GDLGQ+ + T
Sbjct: 104 KIHHVKIGPLQANTTYYYRCG-GNGP-EFSFKTPPST---FPVEFAIVGDLGQTEWTAAT 158
Query: 136 LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195
L+H N + L GDLSYAD + WD++GR VE A+ +PW+ T GNHEI+
Sbjct: 159 LSHI--NSQDYDVFLLPGDLSYADTH----QPLWDSFGRLVEPLASKRPWMVTEGNHEIE 212
Query: 196 FYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKW 255
F+P I T FK Y+ R+ +P+ S ST+ +YS A V+ ++L SY+ + + QY+W
Sbjct: 213 FFPIIEHTT-FKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQYQW 271
Query: 256 LEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVH 315
L+ +L KV+R TPW++VL+HAPWYN+ H EGE+MR E L +VDVVF+GHVH
Sbjct: 272 LQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSGHVH 331
Query: 316 AYER 319
AYER
Sbjct: 332 AYER 335
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q09131 | PPAF_SOYBN | 3, ., 1, ., 3, ., 2 | 0.8375 | 1.0 | 0.6896 | yes | no |
| Q9SDZ9 | PPAF2_IPOBA | 3, ., 1, ., 3, ., 2 | 0.8468 | 1.0 | 0.6881 | N/A | no |
| Q9SIV9 | PPA10_ARATH | 3, ., 1, ., 3, ., 2 | 0.7906 | 1.0 | 0.6837 | yes | no |
| P80366 | PPAF_PHAVU | 3, ., 1, ., 3, ., 2 | 0.7437 | 1.0 | 0.7407 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_IX0440 | hypothetical protein (426 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 320 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 2e-75 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 9e-67 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 8e-29 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 1e-07 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 1e-06 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 8e-05 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 232 bits (595), Expect = 2e-75
Identities = 90/213 (42%), Positives = 123/213 (57%), Gaps = 11/213 (5%)
Query: 114 PDVPYSFGLIGDLGQS-YDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTW 172
D P+ F + GD+GQ+ +S TL H E+ +L VGDL+YAD Y + +RWDT+
Sbjct: 1 DDTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN--NGSRWDTF 58
Query: 173 GRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKR 232
R +E A+Y P++ T GNHE D+ K + R+ P+ SGST+ WYS
Sbjct: 59 MRQIEPLASYVPYMVTPGNHEADY---NFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDV 115
Query: 233 ASVYIIVLSSYSAY---GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYM- 288
V+ + LS+ + G +PQY WLE +L KV+RS+TPW+IV+ H P Y S H
Sbjct: 116 GPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDC 175
Query: 289 -EGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320
EGE MR E KY VD+V +GHVHAYER+
Sbjct: 176 IEGEKMRAALEDLFYKYGVDLVLSGHVHAYERT 208
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 214 bits (547), Expect = 9e-67
Identities = 123/307 (40%), Positives = 172/307 (56%), Gaps = 18/307 (5%)
Query: 17 PQQVHITQGDLVG-KAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYY-NYTS 74
P QVHI+ LVG + +SW+T D +VVY + + + + A G +Y Y Y S
Sbjct: 44 PDQVHIS---LVGPDKMRISWITQDSI-PPSVVYGTVSGKYEGSANGTSSSYHYLLIYRS 99
Query: 75 GYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNV 134
G I+ I L+ NT YYY G + ++F F TPP P F + GDLG S +
Sbjct: 100 GQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKS 156
Query: 135 TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194
TL H + + GDLSYA+ Y WDT+GR V+ A+ +PW+ T GNHE+
Sbjct: 157 TLEHVSKWDY--DVFILPGDLSYANFY----QPLWDTFGRLVQPLASQRPWMVTHGNHEL 210
Query: 195 DFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYK 254
+ P I F Y+ R+ +P+ SGST+ +YS V+II+L SY+ + + QY+
Sbjct: 211 EKIP-ILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQ 269
Query: 255 WLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGET--MRVMYEPWLVKYKVDVVFAG 312
WLE L K++R TPW++ ++HAPWYNS H E E+ M+ E L K +VD+VFAG
Sbjct: 270 WLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAG 329
Query: 313 HVHAYER 319
HVHAYER
Sbjct: 330 HVHAYER 336
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 109 bits (272), Expect = 8e-29
Identities = 43/200 (21%), Positives = 57/200 (28%), Gaps = 18/200 (9%)
Query: 120 FGLIGDLGQSYDSN--VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVE 177
+IGDL D + L K +LF+GDL F
Sbjct: 2 ILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPPSLEVLALL-----FAL 56
Query: 178 RSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYI 237
+ A P GNH+ D S T V I
Sbjct: 57 KLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGT-----------VEI 105
Query: 238 IVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMY 297
I LSS G ++LE + + I+L+H P S +
Sbjct: 106 IGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEAL 165
Query: 298 EPWLVKYKVDVVFAGHVHAY 317
E L VD+V GH H
Sbjct: 166 EDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-07
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Query: 247 GKYTPQYKWLEEELPKVNRSETPWL-------IVLMHAPWYNSYNYHYMEGETMRVMYEP 299
G + L L + P I+L H P Y+ + + +
Sbjct: 38 GDGPDPEEVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLE 97
Query: 300 WLVKYKVDVVFAGHVHAYERS 320
L KY VD+V +GH H YER
Sbjct: 98 LLEKYGVDLVLSGHTHVYERR 118
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 1e-06
Identities = 30/147 (20%), Positives = 42/147 (28%), Gaps = 17/147 (11%)
Query: 174 RFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRA 233
+ R P I GNH D GE ++ W I
Sbjct: 57 ELLARLELPAPVIVVPGNH--DARVVNGE---AFSDQFFNRYAVLVGACSSGGWRVI--G 109
Query: 234 SVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYME---- 289
+ G Q WLEE L ++VL H P +
Sbjct: 110 LDSSVPGVPLGRLGAE--QLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRD 167
Query: 290 -GETMRVMYEPWLVKYKVDVVFAGHVH 315
GE + V+ V +V +GH+H
Sbjct: 168 AGELLDVLIAH---GNDVRLVLSGHIH 191
|
Length = 301 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 8e-05
Identities = 42/157 (26%), Positives = 60/157 (38%), Gaps = 42/157 (26%)
Query: 184 PWIWTAGNHEI--DFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSI------KRASV 235
PW GNH+ + +I T +P S R+ +P +Y + +V
Sbjct: 72 PWYLVLGNHDYSGNVSAQIDYTK--RPNSPRWTMPAY--------YYRVSFPFPSSDTTV 121
Query: 236 YIIVLSS----------YSAYGKYTPQYK-----WLEEELPKVNRSETPWLIVLMHAPWY 280
I++ + S YG + WLE+ L S W IV+ H P Y
Sbjct: 122 EFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTL---AASTADWKIVVGHHPIY 178
Query: 281 NSYNYHYMEGETMRVMYE--PWLVKYKVDVVFAGHVH 315
S H G T ++ P L KYKVD +GH H
Sbjct: 179 -SSGEH---GPTSCLVDRLLPLLKKYKVDAYLSGHDH 211
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 320 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.97 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.96 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.96 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.95 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.92 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.92 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.92 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.92 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.91 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.89 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.89 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.85 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.81 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.79 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.76 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.72 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.7 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.69 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.68 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.63 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.61 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.59 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.58 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.57 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.57 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.55 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.49 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.48 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.45 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.34 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.3 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.27 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.26 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.21 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.19 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.19 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.17 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.16 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.15 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.15 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.14 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.11 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.07 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.04 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.98 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.98 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.96 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.88 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.83 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.8 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.78 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.72 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.69 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.66 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.66 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.55 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.55 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.53 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.51 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.51 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.5 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.48 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.46 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.45 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.45 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.42 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.34 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.34 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.33 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 98.32 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.31 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.31 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.26 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.2 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.19 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 98.17 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.13 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 98.12 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.01 | |
| PHA02239 | 235 | putative protein phosphatase | 97.97 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.87 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.85 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.79 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.79 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.76 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 97.76 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.74 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.67 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.65 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.63 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.53 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.53 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.51 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.46 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.4 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.39 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.32 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.29 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 97.28 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.27 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.24 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.17 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.06 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 97.06 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 97.03 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 97.03 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.91 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.8 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 96.74 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 96.65 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.62 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 96.35 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.34 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 96.27 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.25 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 96.23 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.22 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 96.0 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 95.94 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 95.9 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 95.63 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 95.61 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 95.6 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 95.27 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 94.87 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 94.82 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 94.65 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 94.62 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 93.61 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 91.84 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 88.52 | |
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 85.4 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 82.96 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 82.46 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-64 Score=448.63 Aligned_cols=308 Identities=43% Similarity=0.689 Sum_probs=263.9
Q ss_pred CCCCCccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCC-----ceEEEEEEEEEEeccccce
Q 045849 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQ-----KEQAEGKVYTYKYYNYTSG 75 (320)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 75 (320)
|++++.++.+|.+.+.|+||||++++... +|+|+|.|.+.. ...|+|+...... ...+++.+..+...++..+
T Consensus 29 ~~~~~~~~~~~~~~~~peQvhlS~~~~~~-~m~VswvT~~~~-~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~~~~~sg 106 (452)
T KOG1378|consen 29 LLSESEQLTFPSVVNSPEQVHLSFTDNLN-EMRVSWVTGDGE-ENVVRYGEVKDKLDNSAARGMTEAWTDGYANGWRDSG 106 (452)
T ss_pred cccccccccCcccCCCCCeEEEeccCCCC-cEEEEEeCCCCC-CceEEEeecCCCccccccccceEEEecccccccceee
Confidence 56788899999999999999999998764 999999998643 4999999765542 1223333333333346789
Q ss_pred EEEEEEecCCCCCCEEEEEeCcC-CceeeEEEECCCCCCCCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEccc
Q 045849 76 YIHHCTIRHLEFNTKYYYVVGIG-HTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGD 154 (320)
Q Consensus 76 ~~~~~~l~~L~p~t~Y~Y~v~~~-~~s~~~~F~t~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD 154 (320)
++|+|++++|+|+|+|+|+||++ .||+.++|+|+| ++..+.+|+++||++.......++....+.. ++|+|||.||
T Consensus 107 ~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~-k~d~vlhiGD 183 (452)
T KOG1378|consen 107 YIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYTSTLRNQEENL-KPDAVLHIGD 183 (452)
T ss_pred eEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEccccccccccchHhHHhccc-CCcEEEEecc
Confidence 99999999999999999999997 589999999988 3457999999999999887777777777763 7999999999
Q ss_pred ccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCc
Q 045849 155 LSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRAS 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~ 234 (320)
++|+++..+ .+||.|.++++++++.+|+|++.||||.++.+.. .|..|..+|.+|.++..+..+.||||++|+
T Consensus 184 lsYa~~~~n---~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~ 256 (452)
T KOG1378|consen 184 LSYAMGYSN---WQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSARFNMPGNSSESDSNLYYSFDVGG 256 (452)
T ss_pred hhhcCCCCc---cchHHHHhhhhhhhccCceEEecccccccCCCcc----cccccceeeccCCCcCCCCCceeEEEeecc
Confidence 999988643 6999999999999999999999999999865433 588999999999988777778999999999
Q ss_pred EEEEEEcccCCC--CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCC-CCCccH--HHHHHHHHHHHhCCCcEE
Q 045849 235 VYIIVLSSYSAY--GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNY-HYMEGE--TMRVMYEPWLVKYKVDVV 309 (320)
Q Consensus 235 v~fi~lds~~~~--~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~-~~~~~~--~~~~~l~~l~~~~~v~lv 309 (320)
+|||+|+|+..+ ..+.+|++||+++|++++|++.||+||+.|.|+|++... +..+++ .+|+.|++||-+++||+|
T Consensus 257 vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvv 336 (452)
T KOG1378|consen 257 VHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVV 336 (452)
T ss_pred EEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEE
Confidence 999999998875 346899999999999998776899999999999998774 455555 789999999999999999
Q ss_pred EecCccccccC
Q 045849 310 FAGHVHAYERS 320 (320)
Q Consensus 310 l~GH~H~y~Rt 320 (320)
|.||.|.|||+
T Consensus 337 f~GHvH~YER~ 347 (452)
T KOG1378|consen 337 FWGHVHRYERF 347 (452)
T ss_pred Eeccceehhcc
Confidence 99999999996
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-61 Score=444.67 Aligned_cols=295 Identities=40% Similarity=0.690 Sum_probs=250.0
Q ss_pred CCCCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEe-ccccceEEEEEEecCCCCCCEE
Q 045849 13 GYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKY-YNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 13 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
....|+||||++++ .++|+|+|.|.+. ..+.|+||++++.+..++.|+..+|.. ..+.++++|+|+|+||+|+|+|
T Consensus 40 ~~~~P~qvhls~~~--~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y 116 (427)
T PLN02533 40 DPTHPDQVHISLVG--PDKMRISWITQDS-IPPSVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVY 116 (427)
T ss_pred CCCCCceEEEEEcC--CCeEEEEEECCCC-CCCEEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCCCCCCCEE
Confidence 56689999999997 4799999999864 578999999988888899998887764 2345789999999999999999
Q ss_pred EEEeCcCCceeeEEEECCCCCCCCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhh
Q 045849 92 YYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDT 171 (320)
Q Consensus 92 ~Y~v~~~~~s~~~~F~t~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~ 171 (320)
+|||+...+++.++|+|+|.. .++||+++||+|.......+++++.+. +|||||++||++|+++ .+.+|+.
T Consensus 117 ~Yrvg~~~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~~~~tl~~i~~~--~pD~vl~~GDl~y~~~----~~~~wd~ 187 (427)
T PLN02533 117 YYKCGGPSSTQEFSFRTPPSK---FPIKFAVSGDLGTSEWTKSTLEHVSKW--DYDVFILPGDLSYANF----YQPLWDT 187 (427)
T ss_pred EEEECCCCCccceEEECCCCC---CCeEEEEEEeCCCCcccHHHHHHHHhc--CCCEEEEcCccccccc----hHHHHHH
Confidence 999998777899999998753 689999999998765556677777665 9999999999999764 3468999
Q ss_pred HHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChH
Q 045849 172 WGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTP 251 (320)
Q Consensus 172 ~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~ 251 (320)
|.+.++++.+.+|+|+++||||....+.. ....+..|..+|.+|.+..+...+.||+|++|++|||+||++.++....+
T Consensus 188 f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~ 266 (427)
T PLN02533 188 FGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSE 266 (427)
T ss_pred HHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCccccCchH
Confidence 99999999999999999999999643211 12346778899999976555567899999999999999999988777899
Q ss_pred HHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCc--cHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 252 QYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYME--GETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 252 q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
|++||+++|++++++..+|+||++|+|+|++...+... ...+|+.|++||++++||++|+||+|.|||+
T Consensus 267 Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~ 337 (427)
T PLN02533 267 QYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERF 337 (427)
T ss_pred HHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceeccccc
Confidence 99999999999877788999999999999876543222 2457899999999999999999999999996
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=269.78 Aligned_cols=201 Identities=45% Similarity=0.805 Sum_probs=155.5
Q ss_pred CCCeEEEEEEcCCCC-CCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 115 DVPYSFGLIGDLGQS-YDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~-~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
..++||+++||+|.. .....+++++.+...+|||||++||++|+++.. ...+|+.|++.++++...+|+++++||||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~--~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 79 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN--NGSRWDTFMRQIEPLASYVPYMVTPGNHE 79 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc--cchhHHHHHHHHHHHHhcCCcEEcCcccc
Confidence 368999999999973 455677888877434899999999999886632 23689999999999988999999999999
Q ss_pred cccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC---CCChHHHHHHHHhcccCCCCCCCE
Q 045849 194 IDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY---GKYTPQYKWLEEELPKVNRSETPW 270 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~---~~~~~q~~WL~~~L~~~~~~~~~~ 270 (320)
......... ...+..++.++........+.||+|++|+++||+|||+... ....+|++||+++|+++++.+.+|
T Consensus 80 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~ 156 (294)
T cd00839 80 ADYNFSFYK---IKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPW 156 (294)
T ss_pred cccCCCCcc---cccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCe
Confidence 964321110 01111122233333344567899999999999999997654 457899999999999875556789
Q ss_pred EEEEecccceecCCCCCC--ccHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 271 LIVLMHAPWYNSYNYHYM--EGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 271 ~iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
+||++|+|+|+....... .....++.|.+||++++|+++|+||+|.|+|+
T Consensus 157 ~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~ 208 (294)
T cd00839 157 IIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERT 208 (294)
T ss_pred EEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEee
Confidence 999999999987654322 24577899999999999999999999999996
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=222.33 Aligned_cols=187 Identities=24% Similarity=0.396 Sum_probs=132.1
Q ss_pred eEEEEEEcCCCC-CCcHH----HHHHHHhCCCCCceEEEcccccccCCCCCCCChhh-hhHHHHHhhhhccCCeEeCCCC
Q 045849 118 YSFGLIGDLGQS-YDSNV----TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRW-DTWGRFVERSAAYQPWIWTAGN 191 (320)
Q Consensus 118 ~~f~~~gD~~~~-~~~~~----~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~~~~~GN 191 (320)
++|+++||++.. ..... .+.++.+. .+|||||++||++|+++........| +.|.+.++.+..++|+++++||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GN 79 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGN 79 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCC
Confidence 489999999986 22222 33444444 38999999999999887543333344 3455555555567999999999
Q ss_pred CccccCCCCCCcccCcc--cceeeeCCCCCCCCCCCcEEEEEeC------cEEEEEEcccCCC---------------CC
Q 045849 192 HEIDFYPEIGETVPFKP--YSHRYHVPYRASGSTAPFWYSIKRA------SVYIIVLSSYSAY---------------GK 248 (320)
Q Consensus 192 HD~~~~~~~~~~~~~~~--~~~~f~~p~~~~~~~~~~~ys~~~g------~v~fi~lds~~~~---------------~~ 248 (320)
||..... .....+.. +..++.+ +..||+|+++ +++||+|||.... ..
T Consensus 80 HD~~~~~--~~~~~~~~~~~~~~~~~--------~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 80 HDYSGNV--SAQIDYTKRPNSPRWTM--------PAYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred cccCCCc--hheeehhccCCCCCccC--------cchheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 9986321 11101111 1222222 3569999988 7999999996421 13
Q ss_pred ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 249 YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 249 ~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
..+|++||++.|+++ ..+|+||++|+|+++..... .....++.|.+++++++|+++|+||+|.++|.
T Consensus 150 ~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~ 216 (277)
T cd07378 150 AEEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHI 216 (277)
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceee
Confidence 589999999999985 34899999999999865432 22567899999999999999999999999873
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-29 Score=223.25 Aligned_cols=192 Identities=17% Similarity=0.278 Sum_probs=136.7
Q ss_pred CCCeEEEEEEcCCCCCCcHHHHH----HHHhCCCCCceEEEcccccccCCCCCCCChhhhh-HHHHHhhhh--ccCCeEe
Q 045849 115 DVPYSFGLIGDLGQSYDSNVTLT----HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDT-WGRFVERSA--AYQPWIW 187 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~~~l~----~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~P~~~ 187 (320)
...++|+++||+|.+...+..++ ++.++ .++||||.+||+. .+|..+.++.+|+. |.+...... ..+||++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~ 101 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIPFFT 101 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhhCCCeEE
Confidence 46899999999997665555444 34444 4899999999998 56665555667766 545554433 5789999
Q ss_pred CCCCCccccCCCCCCcccCc------------------ccceeeeCCCCCCCCCCCcEEEE----Ee-------------
Q 045849 188 TAGNHEIDFYPEIGETVPFK------------------PYSHRYHVPYRASGSTAPFWYSI----KR------------- 232 (320)
Q Consensus 188 ~~GNHD~~~~~~~~~~~~~~------------------~~~~~f~~p~~~~~~~~~~~ys~----~~------------- 232 (320)
++||||+..+.... ...+. ....+|.|| +.||.+ ..
T Consensus 102 vLGNHDy~Gn~~AQ-i~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP--------~~yY~~~~~f~~~~~~~~~~~~~~~ 172 (394)
T PTZ00422 102 VLGQADWDGNYNAE-LLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMP--------NYWYHYFTHFTDTSGPSLLKSGHKD 172 (394)
T ss_pred eCCcccccCCchhh-hccccccccccccccccccccccccCCCccCC--------chhheeeeeeecccccccccccCCC
Confidence 99999985332110 00000 112466666 457754 21
Q ss_pred CcEEEEEEcccCC-----CCC-ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCC
Q 045849 233 ASVYIIVLSSYSA-----YGK-YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKV 306 (320)
Q Consensus 233 g~v~fi~lds~~~-----~~~-~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v 306 (320)
..+.||+|||..- +.. ...|++||+++|+.+ ++.++|+||+.|||+|+++..+ ....+++.|+|||++|+|
T Consensus 173 ~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~V 249 (394)
T PTZ00422 173 MSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQV 249 (394)
T ss_pred CEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcCc
Confidence 1289999999531 122 367899999999654 3567899999999999987643 345689999999999999
Q ss_pred cEEEecCccccccC
Q 045849 307 DVVFAGHVHAYERS 320 (320)
Q Consensus 307 ~lvl~GH~H~y~Rt 320 (320)
|++|+||+|+|||.
T Consensus 250 dlYisGHDH~lq~i 263 (394)
T PTZ00422 250 DLYISGYDRNMEVL 263 (394)
T ss_pred CEEEEccccceEEe
Confidence 99999999999983
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=211.87 Aligned_cols=191 Identities=21% Similarity=0.260 Sum_probs=132.5
Q ss_pred CCeEEEEEEcCCCCCC--c---------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhh
Q 045849 116 VPYSFGLIGDLGQSYD--S---------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER 178 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~--~---------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
++++|+++||+|.+.. . ...++.+.+...+||+||++||+++..........+|+.+.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 5899999999998731 1 1122333333248999999999997654211111345666666766
Q ss_pred hhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC------CCChHH
Q 045849 179 SAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY------GKYTPQ 252 (320)
Q Consensus 179 ~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~------~~~~~q 252 (320)
+...+|+++++||||....+.. ..+..|...| ...||++++|+++||+|||.... ....+|
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~~---~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~q 149 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPTE---ESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQ 149 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCCh---hHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHHH
Confidence 6667999999999998532111 1112222222 23588999999999999995422 134789
Q ss_pred HHHHHHhcccCCCCCCCEEEEEecccceecCCCCC----CccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 253 YKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHY----MEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 253 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||+|.+.+
T Consensus 150 l~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~ 220 (262)
T cd07395 150 DVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAG 220 (262)
T ss_pred HHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCc
Confidence 99999999986434567899999999986433211 12345688999999999999999999998765
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-26 Score=215.31 Aligned_cols=284 Identities=20% Similarity=0.268 Sum_probs=144.3
Q ss_pred EEeeCCCCCcEEEEEEeCCC--------CCCCeEE--EeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 22 ITQGDLVGKAVIVSWVTVDE--------PGTNTVV--YWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 22 l~~~~~~~~~~~v~W~t~~~--------~~~~~v~--y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
++.|+ |..+-+|.|..-.. .....|+ +.+.+........+...+ .....++.++.|+||+|+|+|
T Consensus 3 vasGd-p~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y 77 (453)
T PF09423_consen 3 VASGD-PTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRY 77 (453)
T ss_dssp EEEE----SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EE
T ss_pred ccccC-CCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceE
Confidence 34554 44555666776543 1133444 444444333344444332 124678999999999999999
Q ss_pred EEEeCcC---CceeeEEEECCCCCCCCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCC---CC--
Q 045849 92 YYVVGIG---HTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNY---PC-- 163 (320)
Q Consensus 92 ~Y~v~~~---~~s~~~~F~t~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~---~~-- 163 (320)
+||+... ..+..++|+|+|... ...+||+++||.+........+.++.+. .+|||+|++||++|.+.. ..
T Consensus 78 ~Y~~~~~~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~~~~~~~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~ 155 (453)
T PF09423_consen 78 YYRFVVDGGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYEDGYFPAYRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLS 155 (453)
T ss_dssp EEEEEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT--S--SEEEE-S-SS----TTSS--TT
T ss_pred EEEEEEecCCCCCCceEEEcCCCCC-CCceEEEEECCCCcccChHHHHHhhhcc-CCCcEEEEeCCeeeccCCccccccc
Confidence 9999983 467899999996543 3569999999998765567778888774 389999999999999862 00
Q ss_pred -----------CCChhhhh----H-----HHHHhhhhccCCeEeCCCCCccccCCCCCCcc---------------cCcc
Q 045849 164 -----------HDNNRWDT----W-----GRFVERSAAYQPWIWTAGNHEIDFYPEIGETV---------------PFKP 208 (320)
Q Consensus 164 -----------~~~~~~~~----~-----~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~---------------~~~~ 208 (320)
......+. + ...++.+.+.+|+++++.+||+..+....... .+..
T Consensus 156 ~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~a 235 (453)
T PF09423_consen 156 RRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQA 235 (453)
T ss_dssp ---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHH
T ss_pred ccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHH
Confidence 00011111 1 23455667899999999999996432211110 0112
Q ss_pred cceeeeCCCCC---CCCCCCcEEEEEeCc-EEEEEEcccCC-----C----------------CCChHHHHHHHHhcccC
Q 045849 209 YSHRYHVPYRA---SGSTAPFWYSIKRAS-VYIIVLSSYSA-----Y----------------GKYTPQYKWLEEELPKV 263 (320)
Q Consensus 209 ~~~~f~~p~~~---~~~~~~~~ys~~~g~-v~fi~lds~~~-----~----------------~~~~~q~~WL~~~L~~~ 263 (320)
|.+. +|... .......|++|.+|+ +.|++||+... . -.+.+|++||++.|++
T Consensus 236 y~e~--~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~- 312 (453)
T PF09423_consen 236 YFEY--QPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS- 312 (453)
T ss_dssp HHHH--S---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-
T ss_pred HHhh--cCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc-
Confidence 2222 22211 122356799999999 99999998421 0 1368999999999998
Q ss_pred CCCCCCEEEEEecccceecCC-----------CCCCccHHHHHHHHHHHHhCCCc--EEEecCcccc
Q 045849 264 NRSETPWLIVLMHAPWYNSYN-----------YHYMEGETMRVMYEPWLVKYKVD--VVFAGHVHAY 317 (320)
Q Consensus 264 ~~~~~~~~iv~~H~P~~~~~~-----------~~~~~~~~~~~~l~~l~~~~~v~--lvl~GH~H~y 317 (320)
+.++|+||..-.|+..... ..+......|++|..+|.+.++. ++|+|..|..
T Consensus 313 --s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~ 377 (453)
T PF09423_consen 313 --SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHAS 377 (453)
T ss_dssp ----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSE
T ss_pred --CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchh
Confidence 5689999998888754321 12233456799999999998875 7899999974
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-25 Score=183.90 Aligned_cols=192 Identities=20% Similarity=0.332 Sum_probs=125.1
Q ss_pred CCCCeEEEEEEcCCCCCCcHH-H----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhh-HHHHHhhhhccCCeEe
Q 045849 114 PDVPYSFGLIGDLGQSYDSNV-T----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDT-WGRFVERSAAYQPWIW 187 (320)
Q Consensus 114 ~~~~~~f~~~gD~~~~~~~~~-~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~~~ 187 (320)
++++++|+++||++....... . +..+.+. .+.||||.+||++|.+|.....+.+.+. |.+....-.-+.|||.
T Consensus 40 ~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkpWy~ 118 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKPWYS 118 (336)
T ss_pred CCCceEEEEEcccccCCchhHHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccchhh
Confidence 468999999999996533221 1 2233344 3899999999999999876544433322 2222222123469999
Q ss_pred CCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEE----EEe--CcEEEEEEcccCC-----CC---------
Q 045849 188 TAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYS----IKR--ASVYIIVLSSYSA-----YG--------- 247 (320)
Q Consensus 188 ~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys----~~~--g~v~fi~lds~~~-----~~--------- 247 (320)
+.||||+..+-...-..-+.....+|..|.. ||. .+. -++.++++|+... ++
T Consensus 119 vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~ 190 (336)
T KOG2679|consen 119 VLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVK 190 (336)
T ss_pred hccCccccCchhhhhhHHHHhhccceecccH--------HhhcceeeeeeccccccchhhheecccccccccccCChHHH
Confidence 9999999743211100113344456655521 111 111 1234444444211 11
Q ss_pred CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 248 KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 248 ~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
....++.||+..|++ +.++|+||+.|||+.+.+... ....++++|.|||++++||++++||+|+.|.
T Consensus 191 ~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~HG--~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQh 257 (336)
T KOG2679|consen 191 YLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHHG--PTKELEKQLLPILEANGVDLYINGHDHCLQH 257 (336)
T ss_pred HHHHHHHHHHHHHHH---hhcceEEEecccceehhhccC--ChHHHHHHHHHHHHhcCCcEEEecchhhhhh
Confidence 125788999999999 789999999999999877642 4578899999999999999999999999763
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=190.47 Aligned_cols=181 Identities=21% Similarity=0.274 Sum_probs=119.9
Q ss_pred eEEEEEEcCCCCCC----------cHHH----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccC
Q 045849 118 YSFGLIGDLGQSYD----------SNVT----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQ 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~----------~~~~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
|||+++||+|.... .... ++.+.+. +||+||++||+++.... .....|+.+.+.++.+ .+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~--~~d~vv~~GDlv~~~~~--~~~~~~~~~~~~l~~l--~~ 74 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE--SLDFVVQLGDIIDGDNA--RAEEALDAVLAILDRL--KG 74 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC--CCCEEEECCCeecCCCc--hHHHHHHHHHHHHHhc--CC
Confidence 69999999995432 1122 3334333 79999999999965321 1113455555555543 48
Q ss_pred CeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC------------------
Q 045849 184 PWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA------------------ 245 (320)
Q Consensus 184 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------------------ 245 (320)
|+++++||||..... ..+.. .... ......||+|+.++++||+||+...
T Consensus 75 p~~~v~GNHD~~~~~--------~~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~ 141 (267)
T cd07396 75 PVHHVLGNHDLYNPS--------REYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDN 141 (267)
T ss_pred CEEEecCcccccccc--------Hhhhh-cccc----cCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHh
Confidence 999999999985321 00110 0001 1234569999999999999999531
Q ss_pred --------------C--CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcE
Q 045849 246 --------------Y--GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDV 308 (320)
Q Consensus 246 --------------~--~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~l 308 (320)
+ ....+|++||++.|+++.. +..++||++|+|++...... ......++.+.++++++ +|++
T Consensus 142 ~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~ 219 (267)
T cd07396 142 SNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKA 219 (267)
T ss_pred chhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEE
Confidence 0 1247999999999997532 23468999999997654311 11122357889999996 8999
Q ss_pred EEecCcccccc
Q 045849 309 VFAGHVHAYER 319 (320)
Q Consensus 309 vl~GH~H~y~R 319 (320)
+|+||+|.+..
T Consensus 220 v~~GH~H~~~~ 230 (267)
T cd07396 220 CISGHDHEGGY 230 (267)
T ss_pred EEcCCcCCCCc
Confidence 99999999863
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-24 Score=190.82 Aligned_cols=285 Identities=18% Similarity=0.196 Sum_probs=188.9
Q ss_pred EEEEeeCCCCCcEEEEEEeCC-------CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 20 VHITQGDLVGKAVIVSWVTVD-------EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 20 v~l~~~~~~~~~~~v~W~t~~-------~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
.-++.| ||...-.|.|..-. .+....+|++++++....+..|+..+. ....+.+++.++||+|++.|+
T Consensus 41 ~GVaSG-Dp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~----p~~dhtv~v~~~gL~P~~~yf 115 (522)
T COG3540 41 HGVASG-DPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIAS----PELDHTVHVDLRGLSPDQDYF 115 (522)
T ss_pred cccccC-CCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCC----cccCceEEEeccCCCCCceEE
Confidence 333444 55666677787643 134567788887765444433433322 145688899999999999999
Q ss_pred EEeCcC-CceeeEEEECCCCCCCC-CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCC-----
Q 045849 93 YVVGIG-HTERQFWFVTPPEVGPD-VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHD----- 165 (320)
Q Consensus 93 Y~v~~~-~~s~~~~F~t~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~----- 165 (320)
||+..+ ..+..++|+|+|+.+.. .-++|++.++.+.+.+...+.+.|.+. +|||+||.||.+|+++.....
T Consensus 116 YRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~--~~D~viH~GDyIYeyg~~~~~~~~~~ 193 (522)
T COG3540 116 YRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKE--EPDFVIHLGDYIYEYGPIPDEVSLNS 193 (522)
T ss_pred EEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhc--CCCEEEEcCCeeeccCCccccccccc
Confidence 999987 56789999999987632 223444444455555666777788776 899999999999998753111
Q ss_pred -------------ChhhhhHH---------HHHhhhhccCCeEeCCCCCccccCCCCCCcc----------------cCc
Q 045849 166 -------------NNRWDTWG---------RFVERSAAYQPWIWTAGNHEIDFYPEIGETV----------------PFK 207 (320)
Q Consensus 166 -------------~~~~~~~~---------~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~----------------~~~ 207 (320)
....+.|. ..++...+..|+++.+.+||..++...+... .+.
T Consensus 194 ~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~q 273 (522)
T COG3540 194 WKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQ 273 (522)
T ss_pred ccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHH
Confidence 00112221 2334456789999999999997542211111 122
Q ss_pred ccceeeeCCCCCC--CCCCCcEEEEEeCc-EEEEEEcccCC----------------------CCCChHHHHHHHHhccc
Q 045849 208 PYSHRYHVPYRAS--GSTAPFWYSIKRAS-VYIIVLSSYSA----------------------YGKYTPQYKWLEEELPK 262 (320)
Q Consensus 208 ~~~~~f~~p~~~~--~~~~~~~ys~~~g~-v~fi~lds~~~----------------------~~~~~~q~~WL~~~L~~ 262 (320)
+|.+. ||.... ......|.+|.||+ +.|.+||+... -..+..|.+||++.|..
T Consensus 274 AyyE~--mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~ 351 (522)
T COG3540 274 AYYEH--MPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA 351 (522)
T ss_pred HHHHh--CccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh
Confidence 33332 343321 11357799999999 68999998321 01358899999999998
Q ss_pred CCCCCCCEEEEEecccceecC--CC-----------CCCccHHHHHHHHHHHHhCCCc--EEEecCccc
Q 045849 263 VNRSETPWLIVLMHAPWYNSY--NY-----------HYMEGETMRVMYEPWLVKYKVD--VVFAGHVHA 316 (320)
Q Consensus 263 ~~~~~~~~~iv~~H~P~~~~~--~~-----------~~~~~~~~~~~l~~l~~~~~v~--lvl~GH~H~ 316 (320)
+++.|+|+..-.|+-... .. .+.....-|++|..+|...++. ++|+|.+|.
T Consensus 352 ---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~ 417 (522)
T COG3540 352 ---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHY 417 (522)
T ss_pred ---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHH
Confidence 789999999998873211 10 1112234589999999999876 889999996
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.9e-24 Score=184.36 Aligned_cols=176 Identities=19% Similarity=0.208 Sum_probs=121.1
Q ss_pred EEEEEEcCCCCCCc---------HHHHH----HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCe
Q 045849 119 SFGLIGDLGQSYDS---------NVTLT----HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPW 185 (320)
Q Consensus 119 ~f~~~gD~~~~~~~---------~~~l~----~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 185 (320)
||++++|+|.+... ...++ .+.+...+||+||++||+++... ...++.+.+.++.+ .+|+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~~--~~p~ 73 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-----PESYERLRELLAAL--PIPV 73 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-----HHHHHHHHHHHhhc--CCCE
Confidence 69999999987431 22333 33333238999999999997532 23456666666664 7899
Q ss_pred EeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC----CCChHHHHHHHHhcc
Q 045849 186 IWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY----GKYTPQYKWLEEELP 261 (320)
Q Consensus 186 ~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL~~~L~ 261 (320)
++++||||... .+...|..... .....+|+|+.++++|++||+.... ....+|++||++.|+
T Consensus 74 ~~v~GNHD~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~ 139 (240)
T cd07402 74 YLLPGNHDDRA-----------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALA 139 (240)
T ss_pred EEeCCCCCCHH-----------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHH
Confidence 99999999841 11111211000 1235678999999999999986432 135789999999999
Q ss_pred cCCCCCCCEEEEEecccceecCCCC-CCccHHHHHHHHHHHHhC-CCcEEEecCccccc
Q 045849 262 KVNRSETPWLIVLMHAPWYNSYNYH-YMEGETMRVMYEPWLVKY-KVDVVFAGHVHAYE 318 (320)
Q Consensus 262 ~~~~~~~~~~iv~~H~P~~~~~~~~-~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 318 (320)
+.. .+++|+++|+|++...... .......++++.+++.++ +|+++|+||.|...
T Consensus 140 ~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~ 195 (240)
T cd07402 140 EAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPI 195 (240)
T ss_pred hCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchH
Confidence 853 4568999999997653211 011122367899999999 99999999999865
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=182.08 Aligned_cols=186 Identities=19% Similarity=0.230 Sum_probs=117.9
Q ss_pred EEEEEcCCCCCCcH-------HHHHHHHhCCCCCceEEEcccccccCCCCC----CCChhhhhHHHHHhhhhc--cCCeE
Q 045849 120 FGLIGDLGQSYDSN-------VTLTHYERNPRKGQTLLFVGDLSYADNYPC----HDNNRWDTWGRFVERSAA--YQPWI 186 (320)
Q Consensus 120 f~~~gD~~~~~~~~-------~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~P~~ 186 (320)
|++++|+|.+.... ..+...++. .+||+||++||+++...... .....|+.|.+.+..... ..|++
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWF 80 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEE
Confidence 78999999864311 112223333 38999999999996532110 123467777776655432 58999
Q ss_pred eCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEE--EEeCcEEEEEEcccCC----------CCCChHHHH
Q 045849 187 WTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYS--IKRASVYIIVLSSYSA----------YGKYTPQYK 254 (320)
Q Consensus 187 ~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys--~~~g~v~fi~lds~~~----------~~~~~~q~~ 254 (320)
.++||||.......... ...|.+...... ....+|. +..|+++||+|||... ....++|++
T Consensus 81 ~v~GNHD~~~~~~~~~~--~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~ 153 (256)
T cd07401 81 DIRGNHDLFNIPSLDSE--NNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLD 153 (256)
T ss_pred EeCCCCCcCCCCCccch--hhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHH
Confidence 99999999522211111 111221111110 1122333 3458999999999632 123489999
Q ss_pred HHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 255 WLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 255 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
||++.|++. .+.+++||++|+|+....... ....+ .+.++|++++|+++||||.|.+++
T Consensus 154 wL~~~L~~~--~~~~~~IV~~HhP~~~~~~~~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~ 212 (256)
T cd07401 154 RLEKELEKS--TNSNYTIWFGHYPTSTIISPS---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGG 212 (256)
T ss_pred HHHHHHHhc--ccCCeEEEEEcccchhccCCC---cchhH-HHHHHHHhcCCcEEEeCCccCCCc
Confidence 999999875 345689999999996532211 11222 399999999999999999999986
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-22 Score=175.85 Aligned_cols=185 Identities=17% Similarity=0.195 Sum_probs=115.0
Q ss_pred EECCCCCCCCCCeEEEEEEcCCCCCC---------cHHH----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhH
Q 045849 106 FVTPPEVGPDVPYSFGLIGDLGQSYD---------SNVT----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTW 172 (320)
Q Consensus 106 F~t~p~~~~~~~~~f~~~gD~~~~~~---------~~~~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~ 172 (320)
.+|.+.. ..++||++++|+|.... .... ++.+.+...+|||||++||++.... ...+..+
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-----~~~~~~~ 77 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-----SEAYQHF 77 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-----HHHHHHH
Confidence 3554433 36899999999996321 1222 3344343247999999999996421 2345555
Q ss_pred HHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC----CC
Q 045849 173 GRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY----GK 248 (320)
Q Consensus 173 ~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~ 248 (320)
.+.++.+ .+|+++++||||.... +...+... + ....++.+..++++||+|||.... ..
T Consensus 78 ~~~l~~l--~~Pv~~v~GNHD~~~~-----------~~~~~~~~--~---~~~~~~~~~~~~~~~i~Lds~~~g~~~G~l 139 (275)
T PRK11148 78 AEGIAPL--RKPCVWLPGNHDFQPA-----------MYSALQDA--G---ISPAKHVLIGEHWQILLLDSQVFGVPHGEL 139 (275)
T ss_pred HHHHhhc--CCcEEEeCCCCCChHH-----------HHHHHhhc--C---CCccceEEecCCEEEEEecCCCCCCcCCEe
Confidence 5555554 5899999999998411 11111100 0 111233344456999999995421 13
Q ss_pred ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCC-CCCCccHHHHHHHHHHHHhC-CCcEEEecCccccc
Q 045849 249 YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYN-YHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAYE 318 (320)
Q Consensus 249 ~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~-~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 318 (320)
..+|++||++.|++.. .+..||++||||..... +.......-.++|.++++++ +|+++|+||+|...
T Consensus 140 ~~~ql~wL~~~L~~~~---~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~ 208 (275)
T PRK11148 140 SEYQLEWLERKLADAP---ERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQEL 208 (275)
T ss_pred CHHHHHHHHHHHhhCC---CCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHH
Confidence 5899999999998852 23466767765544322 11111122356899999998 89999999999753
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=170.32 Aligned_cols=149 Identities=21% Similarity=0.283 Sum_probs=107.1
Q ss_pred eEEEEEEcCCCCCCc-H----HHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-ccCCeEeCC
Q 045849 118 YSFGLIGDLGQSYDS-N----VTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AYQPWIWTA 189 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~-~----~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~~~ 189 (320)
|||++++|+|..... . ..++.+++.. .+||+||++||+++... ...+|..+.+.++.+. ..+|+++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~----~~~~~~~~~~~~~~l~~~~~p~~~~~ 76 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGD----NDAEWEAADKAFARLDKAGIPYSVLA 76 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCC----CHHHHHHHHHHHHHHHHcCCcEEEEC
Confidence 689999999975432 1 1222332221 38999999999997532 1357888888888886 679999999
Q ss_pred CCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCC
Q 045849 190 GNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETP 269 (320)
Q Consensus 190 GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~ 269 (320)
||||. ++.+|+ ....+|++||++.|++. +.+
T Consensus 77 GNHD~------------------------------------------~~~ld~----~~~~~ql~WL~~~L~~~---~~~ 107 (214)
T cd07399 77 GNHDL------------------------------------------VLALEF----GPRDEVLQWANEVLKKH---PDR 107 (214)
T ss_pred CCCcc------------------------------------------hhhCCC----CCCHHHHHHHHHHHHHC---CCC
Confidence 99993 122222 12489999999999974 334
Q ss_pred EEEEEecccceecCCCCCCc-----cHHHHHHHHHHHHhC-CCcEEEecCcccccc
Q 045849 270 WLIVLMHAPWYNSYNYHYME-----GETMRVMYEPWLVKY-KVDVVFAGHVHAYER 319 (320)
Q Consensus 270 ~~iv~~H~P~~~~~~~~~~~-----~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R 319 (320)
++||++|+|++......... ....++.|.++++++ +|++||+||.|.+.|
T Consensus 108 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~ 163 (214)
T cd07399 108 PAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGR 163 (214)
T ss_pred CEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCce
Confidence 58999999998654332111 123456788999999 799999999999876
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-21 Score=170.54 Aligned_cols=193 Identities=20% Similarity=0.253 Sum_probs=122.6
Q ss_pred EEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCCh----hhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 122 LIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNN----RWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 122 ~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
-+|+.+.... ...+++.+.+...+|||||++||++..+........ .+..+.+.++.....+|+++++||||.
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 3566664332 123444555543489999999999987653211111 244455666666678999999999998
Q ss_pred ccCCCCCC----cccCcccceeee--CCCCC-CCCCCCcEEEEE-eCcEEEEEEcccCCC-----------CCChHHHHH
Q 045849 195 DFYPEIGE----TVPFKPYSHRYH--VPYRA-SGSTAPFWYSIK-RASVYIIVLSSYSAY-----------GKYTPQYKW 255 (320)
Q Consensus 195 ~~~~~~~~----~~~~~~~~~~f~--~p~~~-~~~~~~~~ys~~-~g~v~fi~lds~~~~-----------~~~~~q~~W 255 (320)
........ ...+..+...|. +|... .....+.||++. .++++||+|||.... ....+|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 63221111 001111112221 22111 111346789988 789999999995421 124789999
Q ss_pred HHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCC--CcEEEecCccccc
Q 045849 256 LEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYK--VDVVFAGHVHAYE 318 (320)
Q Consensus 256 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--v~lvl~GH~H~y~ 318 (320)
|+++|+++++.+ ..++|++|+|+....... ....+++|.+++++|. |.++|+||+|..+
T Consensus 202 L~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~ 262 (296)
T cd00842 202 LEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDE 262 (296)
T ss_pred HHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccce
Confidence 999999864333 457899999997754321 1356789999999997 7889999999854
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.4e-19 Score=153.08 Aligned_cols=167 Identities=20% Similarity=0.264 Sum_probs=105.5
Q ss_pred HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhh-H---HHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccc
Q 045849 135 TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDT-W---GRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYS 210 (320)
Q Consensus 135 ~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~ 210 (320)
.+..+.+. .+||+||++||+++.+.. ....+|.. + .+.+..+...+|++.++||||+....... ......|.
T Consensus 36 ~~~~~~~~-l~PD~vv~lGDL~d~G~~--~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~~~~~rf~ 111 (257)
T cd08163 36 NWRYMQKQ-LKPDSTIFLGDLFDGGRD--WADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-LPVRQRFE 111 (257)
T ss_pred HHHHHHHh-cCCCEEEEecccccCCee--CcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-HHHHHHHH
Confidence 34444454 389999999999975331 12244543 3 33333222347999999999986432111 11123344
Q ss_pred eeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC-----CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCC
Q 045849 211 HRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY-----GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNY 285 (320)
Q Consensus 211 ~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-----~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~ 285 (320)
+.|. ...|++.+|+++||+|||.... .....|.+||++.|+... ....+||++|+|+|.....
T Consensus 112 ~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~--~~~p~ILl~H~Plyr~~~~ 179 (257)
T cd08163 112 KYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV--KSKPRILLTHVPLYRPPNT 179 (257)
T ss_pred HHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC--CCCcEEEEeccccccCCCC
Confidence 4442 2357899999999999995421 234679999999988642 2334899999999875332
Q ss_pred CCC------------ccHH----H-HHHHHHHHHhCCCcEEEecCcccc
Q 045849 286 HYM------------EGET----M-RVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 286 ~~~------------~~~~----~-~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
.+. .+.. + .+.-..||++.+..+||+||+|.|
T Consensus 180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~ 228 (257)
T cd08163 180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDY 228 (257)
T ss_pred CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcc
Confidence 110 0100 1 233447788889999999999987
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-20 Score=153.25 Aligned_cols=190 Identities=21% Similarity=0.227 Sum_probs=100.8
Q ss_pred eEEEEEEcCCCCCCcH----HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHH-HHHhhhhccCCeEeCCCCC
Q 045849 118 YSFGLIGDLGQSYDSN----VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWG-RFVERSAAYQPWIWTAGNH 192 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~----~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~~~~~GNH 192 (320)
|||+++||+|...... ..+...... .++|+||++||+++.... ...+.... ..........|+++++|||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~-~~~d~ii~~GD~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAE-NKPDFIIFLGDLVDGGNP----SEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHH-TTTSEEEEESTSSSSSSH----HHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhcc-CCCCEEEeeccccccccc----cccchhhhccchhhhhcccccccccccc
Confidence 6999999999875433 233333333 399999999999976431 11111111 1233446789999999999
Q ss_pred ccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCC---hHHHHHHHHhcccCCCCCCC
Q 045849 193 EIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKY---TPQYKWLEEELPKVNRSETP 269 (320)
Q Consensus 193 D~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~---~~q~~WL~~~L~~~~~~~~~ 269 (320)
|+........... .................... .........+............ ..+..|+...++. ...+
T Consensus 76 D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 150 (200)
T PF00149_consen 76 DYYSGNSFYGFYD-YQFEDYYGNYNYYYSYFNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDD 150 (200)
T ss_dssp SSHHHHHHHHHHH-HHHSSEEECSSEEECTESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEES
T ss_pred ccceecccccccc-ccccccccccccccccCcce-eeecccccccccccccccccccccchhccccccccccc---cccc
Confidence 9963210000000 00000000000000000000 1112222222222211111111 2233334344433 4567
Q ss_pred EEEEEecccceecCCCCCC--ccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 270 WLIVLMHAPWYNSYNYHYM--EGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 270 ~~iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
++||++|+|+++....... .....++.+..++.+++|+++|+||+|.|
T Consensus 151 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 151 PVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 8999999999987654210 12356789999999999999999999987
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-18 Score=143.09 Aligned_cols=148 Identities=19% Similarity=0.198 Sum_probs=96.8
Q ss_pred CeEEEEEEcCCCCCCc------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-ccC
Q 045849 117 PYSFGLIGDLGQSYDS------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AYQ 183 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 183 (320)
.+||++++|+|..... ...+.++++. .+||+||++||+++..... ...+..+.+.++.+. ..+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~---~~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTN---DNSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCc---hHHHHHHHHHHHHHHHcCC
Confidence 6899999999986432 1234444444 4899999999999764421 112445555555553 369
Q ss_pred CeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccC
Q 045849 184 PWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKV 263 (320)
Q Consensus 184 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~ 263 (320)
|+++++||||. .-.....|++||++.|++.
T Consensus 78 p~~~~~GNHD~--------------------------------------------------~g~l~~~ql~wL~~~l~~~ 107 (199)
T cd07383 78 PWAATFGNHDG--------------------------------------------------YDWIRPSQIEWFKETSAAL 107 (199)
T ss_pred CEEEECccCCC--------------------------------------------------CCCCCHHHHHHHHHHHHHH
Confidence 99999999991 0012378999999999885
Q ss_pred C--CCCCCEEEEEecccceecCCC---------CCCc---cHHHHHHHH-HHHHhCCCcEEEecCccccc
Q 045849 264 N--RSETPWLIVLMHAPWYNSYNY---------HYME---GETMRVMYE-PWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 264 ~--~~~~~~~iv~~H~P~~~~~~~---------~~~~---~~~~~~~l~-~l~~~~~v~lvl~GH~H~y~ 318 (320)
. +....+.++++|+|+...... ...+ .......+. .+.+..+|+++|+||+|.++
T Consensus 108 ~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~ 177 (199)
T cd07383 108 KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGND 177 (199)
T ss_pred hhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcc
Confidence 2 223457999999998653210 0001 111223344 44566799999999999865
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.5e-17 Score=139.20 Aligned_cols=176 Identities=18% Similarity=0.153 Sum_probs=103.4
Q ss_pred EEEEEEcCCCCCCc---HHHH----HHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCC
Q 045849 119 SFGLIGDLGQSYDS---NVTL----THYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGN 191 (320)
Q Consensus 119 ~f~~~gD~~~~~~~---~~~l----~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GN 191 (320)
||++++|+|..... ...+ +.+.+. ++|+||++||++... .....+.+.+.++ ...|++.++||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~--~~d~vv~~GDl~~~~-------~~~~~~~~~l~~~-~~~pv~~v~GN 70 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ--KIDHLHIAGDISNDF-------QRSLPFIEKLQEL-KGIKVTFNAGN 70 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc--CCCEEEECCccccch-------hhHHHHHHHHHHh-cCCcEEEECCC
Confidence 58999999975322 2222 233333 899999999999531 1122333333332 45899999999
Q ss_pred CccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC-------------------------
Q 045849 192 HEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY------------------------- 246 (320)
Q Consensus 192 HD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~------------------------- 246 (320)
||+...... ..+...+. + ....+.++.+..++++|++++...++
T Consensus 71 HD~~~~~~~------~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (239)
T TIGR03729 71 HDMLKDLTY------EEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIK 139 (239)
T ss_pred CCCCCCCCH------HHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccC
Confidence 998411110 11111110 0 00122233344467888888731111
Q ss_pred -C-----CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCC------CCCCc-c-HHHHHHHHHHHHhCCCcEEEec
Q 045849 247 -G-----KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYN------YHYME-G-ETMRVMYEPWLVKYKVDVVFAG 312 (320)
Q Consensus 247 -~-----~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~------~~~~~-~-~~~~~~l~~l~~~~~v~lvl~G 312 (320)
. ....|++||++.|++.. .+.+||++|+||..... ..+.. . ....+.|.+++++++|+++|+|
T Consensus 140 ~~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~G 216 (239)
T TIGR03729 140 RPMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFG 216 (239)
T ss_pred CCCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEEC
Confidence 0 12678999999998752 23489999999865211 11111 0 1114688999999999999999
Q ss_pred Cccccc
Q 045849 313 HVHAYE 318 (320)
Q Consensus 313 H~H~y~ 318 (320)
|.|.-.
T Consensus 217 H~H~~~ 222 (239)
T TIGR03729 217 HLHRRF 222 (239)
T ss_pred CccCCC
Confidence 999753
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-16 Score=143.98 Aligned_cols=92 Identities=16% Similarity=0.241 Sum_probs=70.5
Q ss_pred CCcEEEEE-eCcEEEEEEcccCCC-----CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCC-C----CccHH
Q 045849 224 APFWYSIK-RASVYIIVLSSYSAY-----GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYH-Y----MEGET 292 (320)
Q Consensus 224 ~~~~ys~~-~g~v~fi~lds~~~~-----~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-~----~~~~~ 292 (320)
+..||+|+ .++++||+|||.... ...++|++||+++|++. +.+++||++|||++...... . .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999996431 23589999999999973 44679999999998754311 0 01112
Q ss_pred HHHHHHHHHHhC-CCcEEEecCccccc
Q 045849 293 MRVMYEPWLVKY-KVDVVFAGHVHAYE 318 (320)
Q Consensus 293 ~~~~l~~l~~~~-~v~lvl~GH~H~y~ 318 (320)
..++|.++|++| +|.++||||.|...
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~ 393 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNK 393 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCc
Confidence 356899999999 89999999999754
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.5e-16 Score=129.93 Aligned_cols=166 Identities=11% Similarity=0.063 Sum_probs=99.6
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCC
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPE 199 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~ 199 (320)
|+++||+|........ ..+ .. .++|+||++||+++... ......+ +.++. ...|+++++||||.....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~-~~-~~~D~vv~~GDl~~~~~-----~~~~~~~-~~l~~--~~~p~~~v~GNHD~~~~~- 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IIL-KA-EEADAVIVAGDITNFGG-----KEAAVEI-NLLLA--IGVPVLAVPGNCDTPEIL- 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHh-hc-cCCCEEEECCCccCcCC-----HHHHHHH-HHHHh--cCCCEEEEcCCCCCHHHH-
Confidence 5789999986532222 222 33 38999999999996432 1111112 33332 367999999999974210
Q ss_pred CCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC------CCCChHHHHHHHHhcccCCCCCCCEEEE
Q 045849 200 IGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA------YGKYTPQYKWLEEELPKVNRSETPWLIV 273 (320)
Q Consensus 200 ~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------~~~~~~q~~WL~~~L~~~~~~~~~~~iv 273 (320)
......... ..+ ..+.++++.|+++++... ....++|++|+ +.|+. ...+.+|+
T Consensus 69 -------~~~~~~~~~-------~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~il 128 (188)
T cd07392 69 -------GLLTSAGLN-------LHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLIL 128 (188)
T ss_pred -------HhhhcCcEe-------cCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEE
Confidence 000000000 111 234567899999987421 12346889998 44443 23345899
Q ss_pred EecccceecCCCCCCcc-HHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 274 LMHAPWYNSYNYHYMEG-ETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 274 ~~H~P~~~~~~~~~~~~-~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
++|+||+.......... ..-.+.+..++++++++++|+||.|.-
T Consensus 129 v~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~ 173 (188)
T cd07392 129 VTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHES 173 (188)
T ss_pred EECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEeccccc
Confidence 99999976311111111 112467888999999999999999974
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-16 Score=136.13 Aligned_cols=174 Identities=17% Similarity=0.176 Sum_probs=101.3
Q ss_pred EEEEEcCCCCCC--------c---HHHHHHHHh----CCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC
Q 045849 120 FGLIGDLGQSYD--------S---NVTLTHYER----NPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP 184 (320)
Q Consensus 120 f~~~gD~~~~~~--------~---~~~l~~~~~----~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (320)
+.+++|+|.... . ...++++.+ ...+||+||++||+++... ........+.++.+ ..|
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~-----~~~~~~~l~~l~~l--~~~ 73 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK-----LEEAKLDLAWIDAL--PGT 73 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC-----hHHHHHHHHHHHhC--CCC
Confidence 357899997631 1 233333322 1248999999999984321 11222223333332 347
Q ss_pred eEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccC----CC-------------C
Q 045849 185 WIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYS----AY-------------G 247 (320)
Q Consensus 185 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~----~~-------------~ 247 (320)
+++++||||+. .... ..+.+.+ +..+. ......++.++++.|++++... .. .
T Consensus 74 v~~V~GNHD~~-~~~~------~~~~~~l--~~~~~--~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
T cd07393 74 KVLLKGNHDYW-WGSA------SKLRKAL--EESRL--ALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEK 142 (232)
T ss_pred eEEEeCCcccc-CCCH------HHHHHHH--HhcCe--EEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHH
Confidence 89999999983 1110 1111111 00000 0000233556788999876311 10 0
Q ss_pred CChHHHHHHHHhcccCCCC-CCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 248 KYTPQYKWLEEELPKVNRS-ETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 248 ~~~~q~~WL~~~L~~~~~~-~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
....|+.||++.|+++... ...++|+++|+|++..... .+.+..++++++++++|+||+|.+++
T Consensus 143 ~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl~GH~H~~~~ 207 (232)
T cd07393 143 IFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICVYGHLHGVGR 207 (232)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEEECCCCCCcc
Confidence 1256899999999875322 2246899999999775421 23667888999999999999998764
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.2e-15 Score=132.35 Aligned_cols=179 Identities=21% Similarity=0.202 Sum_probs=111.2
Q ss_pred eEEEEEEcCCCC--CC-cHHHH----HHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCC
Q 045849 118 YSFGLIGDLGQS--YD-SNVTL----THYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAG 190 (320)
Q Consensus 118 ~~f~~~gD~~~~--~~-~~~~l----~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~G 190 (320)
++|+.++|.|.. .. ....+ +.+. . .+||+||++||+++. + .....+...++++......|+++++|
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~-~-~~~D~~v~tGDl~~~-~----~~~~~~~~~~~l~~~~~~~~~~~vpG 73 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIE-Q-LKPDLLVVTGDLTND-G----EPEEYRRLKELLARLELPAPVIVVPG 73 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHh-c-CCCCEEEEccCcCCC-C----CHHHHHHHHHHHhhccCCCceEeeCC
Confidence 589999999988 22 22233 3333 2 388999999999976 2 12334455556664556789999999
Q ss_pred CCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEe-CcEEEEEEcccCCC----CCChHHHHHHHHhcccCCC
Q 045849 191 NHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKR-ASVYIIVLSSYSAY----GKYTPQYKWLEEELPKVNR 265 (320)
Q Consensus 191 NHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~~----~~~~~q~~WL~~~L~~~~~ 265 (320)
|||...... ..+...+... ...+-.... ++++++.+|+.... ..+..|++||++.|++...
T Consensus 74 NHD~~~~~~-------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~ 139 (301)
T COG1409 74 NHDARVVNG-------EAFSDQFFNR-------YAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPE 139 (301)
T ss_pred CCcCCchHH-------HHhhhhhccc-------CcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCcc
Confidence 999853210 1111111110 001111112 67899999996532 2468999999999998532
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCC--CcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYK--VDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--v~lvl~GH~H~y 317 (320)
.....+|+++|||+.............-...+..++..++ |+++|+||.|.-
T Consensus 140 ~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 140 RAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred ccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 2112457777777766444332222233456777888888 999999999975
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.8e-15 Score=120.77 Aligned_cols=143 Identities=17% Similarity=0.273 Sum_probs=85.8
Q ss_pred EEEEEcCCCCCCcHHHH-HHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCC
Q 045849 120 FGLIGDLGQSYDSNVTL-THYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYP 198 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l-~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~ 198 (320)
|+++||+|.+....... .+.... .++|+|+++||+++... ...+...........|+++++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~-~~~d~li~~GDi~~~~~--------~~~~~~~~~~~~~~~~v~~v~GNHD~~--- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIA-PDADILVLAGDIGYLTD--------APRFAPLLLALKGFEPVIYVPGNHEFY--- 68 (166)
T ss_pred CceEccccccCccccccccccCCC-CCCCEEEECCCCCCCcc--------hHHHHHHHHhhcCCccEEEeCCCcceE---
Confidence 57899999875433221 121222 48999999999996422 112221233334678999999999983
Q ss_pred CCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCC-ChHHHHHHHHhcccCCCCCCCEEEEEecc
Q 045849 199 EIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGK-YTPQYKWLEEELPKVNRSETPWLIVLMHA 277 (320)
Q Consensus 199 ~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~-~~~q~~WL~~~L~~~~~~~~~~~iv~~H~ 277 (320)
+.|++..-..++.. .+++.+|+.++++ +.+||++|+
T Consensus 69 ------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~Hh 105 (166)
T cd07404 69 ------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHH 105 (166)
T ss_pred ------------------------------------EEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCC
Confidence 11111111111111 1234455544444 248999999
Q ss_pred cceecCCCC-C---CccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 278 PWYNSYNYH-Y---MEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 278 P~~~~~~~~-~---~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
||+...... . ..+...++.+..++++.+|+++++||+|..
T Consensus 106 pP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~ 149 (166)
T cd07404 106 APSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFN 149 (166)
T ss_pred CCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCcccc
Confidence 998754221 1 112244566888888999999999999975
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.1e-14 Score=119.55 Aligned_cols=175 Identities=11% Similarity=0.110 Sum_probs=101.9
Q ss_pred CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-cCCeEeCCCCCcc
Q 045849 116 VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-YQPWIWTAGNHEI 194 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNHD~ 194 (320)
...|++++||+|......+.+.+..+. .++|+||++||+++... ..+.+..+++.+.. ..|+++++||||.
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~-~~~D~vv~~GDl~~~g~-------~~~~~~~~l~~l~~l~~pv~~V~GNhD~ 74 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPE-TGADAIVLIGNLLPKAA-------KSEDYAAFFRILGEAHLPTFYVPGPQDA 74 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhh-cCCCEEEECCCCCCCCC-------CHHHHHHHHHHHHhcCCceEEEcCCCCh
Confidence 467999999999754333333333333 38999999999996421 12334444444432 4799999999997
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEe-CcEEEEEEcccCCC--CCChHHH----HHHHH----hcccC
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKR-ASVYIIVLSSYSAY--GKYTPQY----KWLEE----ELPKV 263 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~~--~~~~~q~----~WL~~----~L~~~ 263 (320)
....... ..|...-..|... ...+.+ ..+ |+++|++|+....+ ...++|. +||.+ .+.+.
T Consensus 75 ~v~~~l~-----~~~~~~~~~p~~~--~lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~ 145 (224)
T cd07388 75 PLWEYLR-----EAYNAELVHPEIR--NVHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL 145 (224)
T ss_pred HHHHHHH-----HHhcccccCccce--ecCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhC
Confidence 3100000 0111000011100 011122 333 56999999865433 2234442 56433 33332
Q ss_pred CCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcc
Q 045849 264 NRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVH 315 (320)
Q Consensus 264 ~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 315 (320)
..+..|+++|+||+.....+ .-.+.+..++++++..+++|||.|
T Consensus 146 ---~~~~~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 146 ---KDYRKVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred ---CCCCeEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 23458999999999874222 224577889999999999999988
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-14 Score=115.24 Aligned_cols=115 Identities=21% Similarity=0.223 Sum_probs=82.0
Q ss_pred EEEEEcCCCCCCcHH----H------HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhcc-CCeEeC
Q 045849 120 FGLIGDLGQSYDSNV----T------LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAY-QPWIWT 188 (320)
Q Consensus 120 f~~~gD~~~~~~~~~----~------l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~~ 188 (320)
|++++|+|.+..... . +...... .++|+|+++||+++... ...+..+.++++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~-~~~d~vi~~GDl~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKA-LDPDLVVITGDLTQRGL-----PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhc-cCCCEEEECCCCCCCCC-----HHHHHHHHHHHHHccccCCcEEEe
Confidence 578999998653211 1 1122223 48999999999997532 24566777777776544 699999
Q ss_pred CCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCC
Q 045849 189 AGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSET 268 (320)
Q Consensus 189 ~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~ 268 (320)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999996
Q ss_pred CEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 269 PWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 269 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
|+++|+|++....... .....++.+.+++++++++++++||+|...
T Consensus 81 ---iv~~Hhp~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~ 126 (144)
T cd07400 81 ---IVVLHHPLVPPPGSGR-ERLLDAGDALKLLAEAGVDLVLHGHKHVPY 126 (144)
T ss_pred ---EEEecCCCCCCCcccc-ccCCCHHHHHHHHHHcCCCEEEECCCCCcC
Confidence 8999999977543211 111146679999999999999999999864
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-14 Score=124.47 Aligned_cols=162 Identities=16% Similarity=0.059 Sum_probs=93.9
Q ss_pred CeEEEEEEcCCCCCCc-----HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCC
Q 045849 117 PYSFGLIGDLGQSYDS-----NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGN 191 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~-----~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GN 191 (320)
++||++++|+|..... .+.++.+.+ .+||+||++||+++.... .. ..+.+.++.+....|+++++||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~--~~~d~vl~~GD~~~~~~~-----~~-~~~~~~l~~l~~~~~v~~v~GN 72 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINA--LKPDLVVLTGDLVDGSVD-----VL-ELLLELLKKLKAPLGVYAVLGN 72 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhc--cCCCEEEEcCcccCCcch-----hh-HHHHHHHhccCCCCCEEEECCC
Confidence 4799999999987532 122333333 389999999999975431 11 3455666666667899999999
Q ss_pred CccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEE
Q 045849 192 HEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWL 271 (320)
Q Consensus 192 HD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~ 271 (320)
||+...... . +....+...+. ...+.+..+..++..+..+... ......+++.+.+++. .+.++.
T Consensus 73 HD~~~~~~~-~---~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~----~~~~~~~~~~~~~~~~--~~~~~~ 137 (223)
T cd07385 73 HDYYSGDEE-N---WIEALESAGIT-----VLRNESVEISVGGATIGIAGVD----DGLGRRPDLEKALKGL--DEDDPN 137 (223)
T ss_pred cccccCchH-H---HHHHHHHcCCE-----EeecCcEEeccCCeEEEEEecc----CccccCCCHHHHHhCC--CCCCCE
Confidence 998532110 0 00011100000 0122344455555443332211 1112234566666653 344578
Q ss_pred EEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 272 IVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 272 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
|++.|.|.+... +.+.++|++++||+|..+
T Consensus 138 I~l~H~P~~~~~-----------------~~~~~~dl~l~GHtHggq 167 (223)
T cd07385 138 ILLAHQPDTAEE-----------------AAAWGVDLQLSGHTHGGQ 167 (223)
T ss_pred EEEecCCChhHH-----------------hcccCccEEEeccCCCCE
Confidence 999998764321 146799999999999865
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-14 Score=122.17 Aligned_cols=186 Identities=17% Similarity=0.074 Sum_probs=103.0
Q ss_pred EEEEEEcCCCCCCc------------HHHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-cc
Q 045849 119 SFGLIGDLGQSYDS------------NVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AY 182 (320)
Q Consensus 119 ~f~~~gD~~~~~~~------------~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 182 (320)
||++++|+|.+... ..+++++. .+ .++|+||++||+++.... ....+..+.+.++.+. ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~~~GD~~~~~~~---~~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIE-EKVDFVLIAGDLFDSNNP---SPEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHh-cCCCEEEECCcccCCCCC---CHHHHHHHHHHHHHHHHCC
Confidence 68999999986421 12233332 22 389999999999965321 2234555666666654 47
Q ss_pred CCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhccc
Q 045849 183 QPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPK 262 (320)
Q Consensus 183 ~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~ 262 (320)
+|+++++||||....... ......+......- ............+..+++.|++++..... ....+.++++..+..
T Consensus 77 ~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~ 152 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVG-VEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRP 152 (223)
T ss_pred CCEEEecCCCCCcccccc--ccchHhhCcEEEEc-ccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhc
Confidence 899999999998632111 00000011111000 00000111223344456888888753321 113344444445444
Q ss_pred CCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 263 VNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 263 ~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
. .....+|+++|.|+.......... .......+...++|++++||.|..+
T Consensus 153 ~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~ 202 (223)
T cd00840 153 L--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQ 202 (223)
T ss_pred c--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCe
Confidence 3 345569999999987654321111 1233445567899999999999864
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=125.29 Aligned_cols=91 Identities=23% Similarity=0.294 Sum_probs=63.5
Q ss_pred CcEEEEE-eCcE--EEEEEcccCC---------C--CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCC-CC--C
Q 045849 225 PFWYSIK-RASV--YIIVLSSYSA---------Y--GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYN-YH--Y 287 (320)
Q Consensus 225 ~~~ys~~-~g~v--~fi~lds~~~---------~--~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~-~~--~ 287 (320)
..||+|+ .|++ +||+||+... + ...++|++||+++|+.... +.+++|+++|+|+.+... .. +
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 3499999 5855 9999998541 1 1358999999999998632 456778878888765221 10 0
Q ss_pred C----------ccHHHHHHHHHHHHhC-CCcEEEecCccc
Q 045849 288 M----------EGETMRVMYEPWLVKY-KVDVVFAGHVHA 316 (320)
Q Consensus 288 ~----------~~~~~~~~l~~l~~~~-~v~lvl~GH~H~ 316 (320)
. .+...-.+|..+|++| +|.++||||.|.
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHr 410 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHL 410 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccc
Confidence 0 0011124899999999 788999999995
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-13 Score=119.02 Aligned_cols=160 Identities=16% Similarity=0.082 Sum_probs=90.9
Q ss_pred CCCeEEEEEEcCCCCCC-cHHHHH----HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCC
Q 045849 115 DVPYSFGLIGDLGQSYD-SNVTLT----HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTA 189 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~-~~~~l~----~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (320)
..++||++++|+|.+.. ....++ .+.+ .+||+|+++||+++.+. ...+..+.+.++.+....|+++++
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~--~~pDlVli~GD~~d~~~-----~~~~~~~~~~L~~L~~~~pv~~V~ 119 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGIE--QKPDLILLGGDYVLFDM-----PLNFSAFSDVLSPLAECAPTFACF 119 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHHh--cCCCEEEEccCcCCCCc-----cccHHHHHHHHHHHhhcCCEEEec
Confidence 35799999999998632 222233 3333 39999999999996321 123455667777777778999999
Q ss_pred CCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCc--EEEEEEcccCCCCCChHHHHHHHHhcccCCCCC
Q 045849 190 GNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRAS--VYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSE 267 (320)
Q Consensus 190 GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~--v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~ 267 (320)
||||+....... ..+....+.. +..-..+....+..++ +.++++|.... +... ..+.+++
T Consensus 120 GNHD~~~~~~~~--~~~~~~l~~~-----gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~----- 181 (271)
T PRK11340 120 GNHDRPVGTEKN--HLIGETLKSA-----GITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA----- 181 (271)
T ss_pred CCCCcccCccch--HHHHHHHHhc-----CcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC-----
Confidence 999985221000 0000111110 0001123344444443 66777763211 1101 1122222
Q ss_pred CCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 268 TPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 268 ~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
...+|++.|.|-.-. .+.+.++||+||||+|-
T Consensus 182 ~~~~IlL~H~P~~~~-----------------~~~~~~~dL~lsGHTHG 213 (271)
T PRK11340 182 NLPRLVLAHNPDSKE-----------------VMRDEPWDLMLCGHTHG 213 (271)
T ss_pred CCCeEEEEcCCChhH-----------------hhccCCCCEEEeccccC
Confidence 235899999997532 12357899999999995
|
|
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.1e-13 Score=114.26 Aligned_cols=193 Identities=19% Similarity=0.258 Sum_probs=105.8
Q ss_pred CCCeEEEEEEcCCCCCC--------------------cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHH
Q 045849 115 DVPYSFGLIGDLGQSYD--------------------SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR 174 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~ 174 (320)
.++|||+.++|+|.+.. ...-+.++++. ++||||+++||++++... ...-..+.+
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~s-E~PDlVVfTGD~i~g~~t----~Da~~sl~k 125 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLAS-EKPDLVVFTGDNIFGHST----QDAATSLMK 125 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhc-cCCCEEEEeCCccccccc----HhHHHHHHH
Confidence 57899999999997643 11235566666 599999999999986331 112234566
Q ss_pred HHhhh-hccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCC--CCCC-CC--------CcEEEEEeC---------
Q 045849 175 FVERS-AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYR--ASGS-TA--------PFWYSIKRA--------- 233 (320)
Q Consensus 175 ~~~~~-~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~--~~~~-~~--------~~~ys~~~g--------- 233 (320)
.+.|. ..++||.++.||||-.......+. ..+.. .+|.. .... .+ +.|-...+|
T Consensus 126 AvaP~I~~~IPwA~~lGNHDdes~ltr~ql---~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 126 AVAPAIDRKIPWAAVLGNHDDESDLTRLQL---MKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HhhhHhhcCCCeEEEecccccccccCHHHH---HHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 66664 578999999999998632110000 00000 01100 0000 00 111111111
Q ss_pred -cEEEEEEcccCC---------CC-CChHHHHHHHHhcccC---CCCCCC-EEEEEecccce--ecCCCC------CCcc
Q 045849 234 -SVYIIVLSSYSA---------YG-KYTPQYKWLEEELPKV---NRSETP-WLIVLMHAPWY--NSYNYH------YMEG 290 (320)
Q Consensus 234 -~v~fi~lds~~~---------~~-~~~~q~~WL~~~L~~~---~~~~~~-~~iv~~H~P~~--~~~~~~------~~~~ 290 (320)
-..+++||+... |+ ..+.|..||+..-.+. +..-.| .-++++|.|+- ..-... ..++
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~ 280 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEG 280 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecc
Confidence 124556665321 22 2378999998876321 111122 36889999983 221111 0111
Q ss_pred ---HHHHHHHHHHHH-hCCCcEEEecCcccc
Q 045849 291 ---ETMRVMYEPWLV-KYKVDVVFAGHVHAY 317 (320)
Q Consensus 291 ---~~~~~~l~~l~~-~~~v~lvl~GH~H~y 317 (320)
......+...|. ..+|++|++||+|+.
T Consensus 281 ~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvN 311 (379)
T KOG1432|consen 281 VSASKHNSGFLTTLVNRGNVKGVFCGHDHVN 311 (379)
T ss_pred ccccccccHHHHHHHhccCcceEEecccccc
Confidence 122345666666 789999999999974
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-12 Score=101.75 Aligned_cols=116 Identities=24% Similarity=0.290 Sum_probs=82.0
Q ss_pred EEEEcCCCCCCcHHHHH--HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCC
Q 045849 121 GLIGDLGQSYDSNVTLT--HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYP 198 (320)
Q Consensus 121 ~~~gD~~~~~~~~~~l~--~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~ 198 (320)
+++||+|.......... ...+. .++|+||++||+++.... ..+..+...........|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~-~~~~~vi~~GD~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAA-EKPDFVLVLGDLVGDGPD-----PEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcc-cCCCEEEECCcccCCCCC-----chHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 36899998765443322 22233 499999999999976432 222333223334457899999999999
Q ss_pred CCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEeccc
Q 045849 199 EIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAP 278 (320)
Q Consensus 199 ~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P 278 (320)
|+++|.|
T Consensus 70 -------------------------------------------------------------------------i~~~H~~ 76 (131)
T cd00838 70 -------------------------------------------------------------------------ILLTHGP 76 (131)
T ss_pred -------------------------------------------------------------------------EEEeccC
Confidence 8999999
Q ss_pred ceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 279 WYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
++.............++.+..++.+.+++++|+||.|.+.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~ 118 (131)
T cd00838 77 PYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERR 118 (131)
T ss_pred CCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeeccccc
Confidence 987654332222225788899999999999999999999863
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.5e-12 Score=98.27 Aligned_cols=116 Identities=17% Similarity=0.180 Sum_probs=74.0
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCC
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYP 198 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~ 198 (320)
||+++||+|.... .... .++|+||++||+++... ...++.+.+.++.+. ..++++++||||...
T Consensus 1 ~i~~isD~H~~~~-------~~~~-~~~D~vi~~GD~~~~~~-----~~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~-- 64 (135)
T cd07379 1 RFVCISDTHSRHR-------TISI-PDGDVLIHAGDLTERGT-----LEELQKFLDWLKSLP-HPHKIVIAGNHDLTL-- 64 (135)
T ss_pred CEEEEeCCCCCCC-------cCcC-CCCCEEEECCCCCCCCC-----HHHHHHHHHHHHhCC-CCeEEEEECCCCCcC--
Confidence 5899999997654 1122 38999999999985421 122334444454432 223578999999731
Q ss_pred CCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEeccc
Q 045849 199 EIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAP 278 (320)
Q Consensus 199 ~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P 278 (320)
. + . ...|+++|.|
T Consensus 65 --------~----------------------------------------------------~-----~--~~~ilv~H~~ 77 (135)
T cd07379 65 --------D----------------------------------------------------P-----E--DTDILVTHGP 77 (135)
T ss_pred --------C----------------------------------------------------C-----C--CCEEEEECCC
Confidence 0 1 1 2368899999
Q ss_pred ceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 279 WYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
++............-.+.+..++++++++++++||+|..
T Consensus 78 p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~ 116 (135)
T cd07379 78 PYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEG 116 (135)
T ss_pred CCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCc
Confidence 977543211101111245667778999999999999986
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.2e-12 Score=102.22 Aligned_cols=106 Identities=17% Similarity=0.316 Sum_probs=68.4
Q ss_pred CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh---hccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCC
Q 045849 144 RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS---AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRAS 220 (320)
Q Consensus 144 ~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~ 220 (320)
.+||+||++||+++.+... ....|.+..+.+..+ ...+|++.++||||.+..... ......++|.
T Consensus 41 l~PD~Vi~lGDL~D~G~~~--~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~----~~~~~v~RF~------ 108 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIA--NDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEED----PIESKIRRFE------ 108 (195)
T ss_pred cCCCEEEEeccccCCCCCC--CHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCC----cCHHHHHHHH------
Confidence 3899999999999876532 222344333333333 346899999999999632110 0001111221
Q ss_pred CCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHH
Q 045849 221 GSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300 (320)
Q Consensus 221 ~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l 300 (320)
. +| |++.|.|+...... .+..+
T Consensus 109 ----~-~F-------------------------------------------i~lsH~P~~~~~~~----------~~~~~ 130 (195)
T cd08166 109 ----K-YF-------------------------------------------IMLSHVPLLAEGGQ----------ALKHV 130 (195)
T ss_pred ----H-hh-------------------------------------------eeeecccccccccH----------HHHHH
Confidence 0 01 89999999875431 56778
Q ss_pred HHhCCCcEEEecCcccccc
Q 045849 301 LVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 301 ~~~~~v~lvl~GH~H~y~R 319 (320)
+.+++++++|+||.|.+.+
T Consensus 131 ~~~~~p~~Ifs~H~H~s~~ 149 (195)
T cd08166 131 VTDLDPDLIFSAHRHKSSI 149 (195)
T ss_pred HHhcCceEEEEcCccceee
Confidence 8899999999999998753
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.7e-11 Score=105.87 Aligned_cols=178 Identities=16% Similarity=0.111 Sum_probs=91.9
Q ss_pred eEEEEEEcCCCCCCcHH---HHHH-HHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-cCCeEeCCCCC
Q 045849 118 YSFGLIGDLGQSYDSNV---TLTH-YERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-YQPWIWTAGNH 192 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~---~l~~-~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNH 192 (320)
+|++++||+|.+..... .+.+ +.....++|+|+++||+++.-..............+.++.+.. .+|+++++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 47999999998754322 2222 2222248999999999995311000011122344555666654 48999999999
Q ss_pred ccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEE
Q 045849 193 EIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLI 272 (320)
Q Consensus 193 D~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~i 272 (320)
|..... .+.+..... .-.....+.+++.+++..-... +...+..++++++.++.. +..
T Consensus 81 D~~~~~---------~~~~~~g~~------~l~~~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~~r~~------~~~ 138 (241)
T PRK05340 81 DFLLGK---------RFAKAAGMT------LLPDPSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRKVRNP------WLQ 138 (241)
T ss_pred chhhhH---------HHHHhCCCE------EeCCcEEEEECCEEEEEECCcc-cccCCHHHHHHHHHHhCH------HHH
Confidence 984211 111111100 0011223566676666543211 111345555555555541 222
Q ss_pred EEecccceecCCC---------------CCCc-cHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 273 VLMHAPWYNSYNY---------------HYME-GETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 273 v~~H~P~~~~~~~---------------~~~~-~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
.++|.+++..... .... .....+.+.+++++++++++++||+|.-
T Consensus 139 ~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~ 199 (241)
T PRK05340 139 WLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRP 199 (241)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCc
Confidence 3333333321000 0000 0011246778889999999999999974
|
|
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-11 Score=104.57 Aligned_cols=84 Identities=15% Similarity=0.090 Sum_probs=60.6
Q ss_pred EECCCCCCCCCCeEEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhcc
Q 045849 106 FVTPPEVGPDVPYSFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAY 182 (320)
Q Consensus 106 F~t~p~~~~~~~~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
-.++..+....+++|+.++|+|..... .+.+.++... .||+|+++||+++.. .......+.+.++++.+.
T Consensus 33 i~~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~--~~DlivltGD~~~~~-----~~~~~~~~~~~L~~L~~~ 105 (284)
T COG1408 33 ILTPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANE--LPDLIVLTGDYVDGD-----RPPGVAALALFLAKLKAP 105 (284)
T ss_pred eecCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhc--CCCEEEEEeeeecCC-----CCCCHHHHHHHHHhhhcc
Confidence 334444444578999999999987544 2223344443 779999999999741 123456778888899999
Q ss_pred CCeEeCCCCCcccc
Q 045849 183 QPWIWTAGNHEIDF 196 (320)
Q Consensus 183 ~P~~~~~GNHD~~~ 196 (320)
.+++++.||||+..
T Consensus 106 ~gv~av~GNHd~~~ 119 (284)
T COG1408 106 LGVFAVLGNHDYGV 119 (284)
T ss_pred CCEEEEeccccccc
Confidence 99999999999963
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5e-11 Score=95.73 Aligned_cols=121 Identities=20% Similarity=0.260 Sum_probs=70.8
Q ss_pred eEEEEEEcCCCCCCcH-HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcccc
Q 045849 118 YSFGLIGDLGQSYDSN-VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDF 196 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 196 (320)
+||+++||+|...... +.++.+ .++|+||++||++.. ..+.+.++.+ |++++.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~----~~~d~vi~~GDi~~~-----------~~~~~~~~~~----~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI----NEPDFVIILGDIFDP-----------EEVLELLRDI----PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH----TTESEEEEES-SCSH-----------HHHHHHHHHH----EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh----cCCCEEEECCCchhH-----------HHHHHHHhcC----CEEEEeCCccccc
Confidence 6999999999864332 223333 379999999999831 3444444443 8999999999631
Q ss_pred CCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEec
Q 045849 197 YPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMH 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H 276 (320)
+...... .. +...+.. .-....|+++|
T Consensus 62 ------------~~~~~~~---------~~-----------------------------~~~~~~~---~~~~~~i~~~H 88 (156)
T PF12850_consen 62 ------------FPNENDE---------EY-----------------------------LLDALRL---TIDGFKILLSH 88 (156)
T ss_dssp ------------HHSEECT---------CS-----------------------------SHSEEEE---EETTEEEEEES
T ss_pred ------------chhhhhc---------cc-----------------------------cccceee---eecCCeEEEEC
Confidence 1111100 00 1111111 11245889999
Q ss_pred ccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 277 APWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 277 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
.+++.... ..+.+..++...+++++++||.|...
T Consensus 89 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~ 122 (156)
T PF12850_consen 89 GHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQ 122 (156)
T ss_dssp STSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEE
T ss_pred CCCccccc--------ChhhhhhhhcccCCCEEEcCCcccce
Confidence 87766331 12345577779999999999999865
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.6e-10 Score=96.80 Aligned_cols=64 Identities=20% Similarity=0.305 Sum_probs=42.7
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcccc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDF 196 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 196 (320)
+||+++||+|..... .....+ +. .+||+||++||++.. . ..+.+.+..+ ..|+++++||||..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l-~~-~~pD~Vl~~GDi~~~--------~--~~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKAL-HL-LQPDLVLFVGDFGNE--------S--VQLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHH-hc-cCCCEEEECCCCCcC--------h--HHHHHHHHhC--CCCeEEEcCCCcccc
Confidence 589999999976432 222333 33 389999999999832 1 1233333332 468999999999864
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.2e-10 Score=98.21 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=76.0
Q ss_pred EEEEEEcCCCCCCcHHHHHHHH---hCCCCCceEEEcccccccCCCCCC--------------CChhhhh----H-----
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCH--------------DNNRWDT----W----- 172 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~--------------~~~~~~~----~----- 172 (320)
||++.+|.+...........+. .. .+||++|++||.+|++..... .....+. +
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~-~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~ 79 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSE-EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRS 79 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccc-cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcC
Confidence 5788888876655444444443 23 399999999999999863210 0011111 1
Q ss_pred HHHHhhhhccCCeEeCCCCCccccCCCCCC-------c------ccCcccceeeeCCCCCCC--CCCCcEEEEEeCcE-E
Q 045849 173 GRFVERSAAYQPWIWTAGNHEIDFYPEIGE-------T------VPFKPYSHRYHVPYRASG--STAPFWYSIKRASV-Y 236 (320)
Q Consensus 173 ~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~-------~------~~~~~~~~~f~~p~~~~~--~~~~~~ys~~~g~v-~ 236 (320)
...++.+.+.+|++.++++||+..+..... . .....|......+..... .....|+++.+|.. .
T Consensus 80 ~p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~ 159 (228)
T cd07389 80 DPDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVD 159 (228)
T ss_pred CHHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcce
Confidence 123455678899999999999974432210 0 011234433333322222 34678999999996 9
Q ss_pred EEEEcccC
Q 045849 237 IIVLSSYS 244 (320)
Q Consensus 237 fi~lds~~ 244 (320)
|++||+..
T Consensus 160 ~~~lD~R~ 167 (228)
T cd07389 160 LILLDTRT 167 (228)
T ss_pred EEEEeccc
Confidence 99999854
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.4e-10 Score=95.60 Aligned_cols=176 Identities=16% Similarity=0.140 Sum_probs=103.8
Q ss_pred CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-ccCCeEeCCCCCcc
Q 045849 116 VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AYQPWIWTAGNHEI 194 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~~~GNHD~ 194 (320)
..+|+++++|.|........+....+.. ++|+++++||++|-.-. +...-.+-.. ++.+. ..+|+++++||-|-
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~-~~D~lviaGDlt~~~~~---~~~~~~~~~~-~e~l~~~~~~v~avpGNcD~ 76 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADI-RADLLVIAGDLTYFHFG---PKEVAEELNK-LEALKELGIPVLAVPGNCDP 76 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhc-cCCEEEEecceehhhcC---chHHHHhhhH-HHHHHhcCCeEEEEcCCCCh
Confidence 3689999999998876555555555553 89999999999943211 1111111100 34443 67899999999876
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC--C----CCChH-HHHHHHHhcccCCCCC
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA--Y----GKYTP-QYKWLEEELPKVNRSE 267 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~--~----~~~~~-q~~WL~~~L~~~~~~~ 267 (320)
..-. . ........ -.. -+..++++.|+.+--... + ...++ -+.-|++.++..+ +
T Consensus 77 ~~v~--------~-~l~~~~~~-----v~~---~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~--~ 137 (226)
T COG2129 77 PEVI--------D-VLKNAGVN-----VHG---RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD--N 137 (226)
T ss_pred HHHH--------H-HHHhcccc-----ccc---ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc--C
Confidence 3110 0 00001000 001 346677777777432111 1 11122 2344555555532 1
Q ss_pred CCEEEEEecccceecCCCCCCcc--HHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 268 TPWLIVLMHAPWYNSYNYHYMEG--ETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 268 ~~~~iv~~H~P~~~~~~~~~~~~--~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
. -+|+++|.|||.....- ..+ ..-.+.+..++++.++.+.+|||.|-+
T Consensus 138 ~-~~Il~~HaPP~gt~~d~-~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs 187 (226)
T COG2129 138 P-VNILLTHAPPYGTLLDT-PSGYVHVGSKAVRKLIEEFQPLLGLHGHIHES 187 (226)
T ss_pred c-ceEEEecCCCCCccccC-CCCccccchHHHHHHHHHhCCceEEEeeeccc
Confidence 1 13999999999876542 222 223578889999999999999999964
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-10 Score=89.77 Aligned_cols=47 Identities=17% Similarity=0.155 Sum_probs=32.1
Q ss_pred EEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 271 LIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 271 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
+|+++|+|++....... ....-.+.+..++.+++++++|+||+|...
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~ 104 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNY 104 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCc
Confidence 58889998875432110 011224577788889999999999999653
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.3e-10 Score=104.58 Aligned_cols=176 Identities=16% Similarity=0.241 Sum_probs=102.4
Q ss_pred HHHHHHhCCCCCceEEEcccccccCCCCCCCChhh---hhHHHHHhhhhccCCeEeCCCCCccccCCCCCC----cc---
Q 045849 135 TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRW---DTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGE----TV--- 204 (320)
Q Consensus 135 ~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~----~~--- 204 (320)
+|+++.++..++|||+++||++-.+.+....+... ....+.+.+....+|+|++.||||......+.. ..
T Consensus 200 ~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~~ 279 (577)
T KOG3770|consen 200 ALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHSQ 279 (577)
T ss_pred HHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhhh
Confidence 45566666445999999999996654432222222 223445556677999999999999853221110 00
Q ss_pred --cCcccceeee--CCCCC-CCCCCCcEEEE-EeCcEEEEEEcccCCC----------CCChHHHHHHHHhcccCCCCCC
Q 045849 205 --PFKPYSHRYH--VPYRA-SGSTAPFWYSI-KRASVYIIVLSSYSAY----------GKYTPQYKWLEEELPKVNRSET 268 (320)
Q Consensus 205 --~~~~~~~~f~--~p~~~-~~~~~~~~ys~-~~g~v~fi~lds~~~~----------~~~~~q~~WL~~~L~~~~~~~~ 268 (320)
.|.++...|. +|... .....+.+|.. -+++.++|+||+...+ ....+|++|+..+|.+++..+
T Consensus 280 ~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~G- 358 (577)
T KOG3770|consen 280 LWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESAG- 358 (577)
T ss_pred hHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhcC-
Confidence 0011111111 22211 12233455654 4588999999995321 234788999999998876444
Q ss_pred CEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCC--CcEEEecCccc
Q 045849 269 PWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYK--VDVVFAGHVHA 316 (320)
Q Consensus 269 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--v~lvl~GH~H~ 316 (320)
.-+-++.|.|+-...-. +.-...+..++.++. |...|.||.|.
T Consensus 359 ekVhil~HIPpG~~~c~-----~~ws~~f~~iv~r~~~tI~gqf~GH~h~ 403 (577)
T KOG3770|consen 359 EKVHILGHIPPGDGVCL-----EGWSINFYRIVNRFRSTIAGQFYGHTHI 403 (577)
T ss_pred CEEEEEEeeCCCCcchh-----hhhhHHHHHHHHHHHHhhhhhccccCcc
Confidence 44888999998542211 111234445555552 55679999996
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=3e-10 Score=89.56 Aligned_cols=157 Identities=17% Similarity=0.134 Sum_probs=83.1
Q ss_pred HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceee
Q 045849 134 VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRY 213 (320)
Q Consensus 134 ~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f 213 (320)
++-++.......-|.|++.||+..+...... ..=++++..+. .+ -+.+.||||+.+. ..... ...+....
T Consensus 32 kI~k~W~~~v~~eDiVllpGDiSWaM~l~ea-----~~Dl~~i~~LP-G~-K~m~rGNHDYWw~-s~skl--~n~lp~~l 101 (230)
T COG1768 32 KIKKHWRSKVSPEDIVLLPGDISWAMRLEEA-----EEDLRFIGDLP-GT-KYMIRGNHDYWWS-SISKL--NNALPPIL 101 (230)
T ss_pred HHHHHHHhcCChhhEEEecccchhheechhh-----hhhhhhhhcCC-Cc-EEEEecCCccccc-hHHHH--HhhcCchH
Confidence 3334444443345899999999987553211 11234444432 22 4679999999653 11100 00111100
Q ss_pred eCCCCCCCCCCCcEEEEEeCcEEEEEE---ccc-CCCCCChHH--------HHHHHH-hcccCCCCCCCEEEEEecccce
Q 045849 214 HVPYRASGSTAPFWYSIKRASVYIIVL---SSY-SAYGKYTPQ--------YKWLEE-ELPKVNRSETPWLIVLMHAPWY 280 (320)
Q Consensus 214 ~~p~~~~~~~~~~~ys~~~g~v~fi~l---ds~-~~~~~~~~q--------~~WL~~-~L~~~~~~~~~~~iv~~H~P~~ 280 (320)
.+- +. .|.+++..+++. |+. .++....+| +.-|+. ..++. ++...-.||++|.|++
T Consensus 102 ~~~--------n~--~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l-~k~~~~fivM~HYPP~ 170 (230)
T COG1768 102 FYL--------NN--GFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAAL-PKGVSKFIVMTHYPPF 170 (230)
T ss_pred hhh--------cc--ceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhc-ccCcCeEEEEEecCCC
Confidence 000 00 134444433332 221 112222222 333443 22222 3445568999999999
Q ss_pred ecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 281 NSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
+..... ..+..++++++|+.++.||.|--.|
T Consensus 171 s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~ 201 (230)
T COG1768 171 SDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPR 201 (230)
T ss_pred CCCCCC--------cchHHHHhhcceeeEEeeeccCCCC
Confidence 866532 1567788899999999999998765
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=1e-10 Score=95.35 Aligned_cols=59 Identities=22% Similarity=0.450 Sum_probs=38.0
Q ss_pred HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-------ccCCeEeCCCCCcccc
Q 045849 135 TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-------AYQPWIWTAGNHEIDF 196 (320)
Q Consensus 135 ~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~P~~~~~GNHD~~~ 196 (320)
.+..+.+. .+||+||++||+++.... .....|....+.++.+. ..+|++.++||||...
T Consensus 36 ~~~~~i~~-~~pd~vi~lGDl~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 36 AFKTALQR-LKPDVVLFLGDLFDGGRI--ADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHHHHHh-cCCCEEEEeccccCCcEe--CCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34445555 499999999999975331 11234554444443332 2689999999999963
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.6e-10 Score=93.00 Aligned_cols=177 Identities=15% Similarity=0.167 Sum_probs=86.5
Q ss_pred CeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhh--------------------------
Q 045849 117 PYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWD-------------------------- 170 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~-------------------------- 170 (320)
+-+++.++|.+........+...+... +||.|+++||++-... ....|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~-~~D~~v~~G~~~~~~a----~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEK-GPDAVVFVGDLLKAEA----RSDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHH-T-SEEEEES-SS-TCH----HHHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhcccc-CCCEEEEeccccccch----hhhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 448999999986654444444444443 9999999999984321 123343
Q ss_pred hHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC-C--
Q 045849 171 TWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY-G-- 247 (320)
Q Consensus 171 ~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-~-- 247 (320)
.|++.+.. ..+|++++|||||........ ..|......|.- -.-...+.+.-|...|+++..+-.- .
T Consensus 80 ~ff~~L~~--~~~p~~~vPG~~Dap~~~~lr-----~a~~~e~v~p~~---~~vH~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 80 KFFRILGE--LGVPVFVVPGNMDAPERFFLR-----EAYNAEIVTPHI---HNVHESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HHHHHHHC--C-SEEEEE--TTS-SHHHHHH-----HHHHCCCC-TTE---EE-CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HHHHHHHh--cCCcEEEecCCCCchHHHHHH-----HHhccceeccce---eeeeeeecccCCcEEEEecCccccCCCcc
Confidence 33333333 578999999999983100000 001111111110 0011223344455777776542110 0
Q ss_pred ------CChHHHHHHHHhcccCCCCCCCEEEEEecccc-eecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 248 ------KYTPQYKWLEEELPKVNRSETPWLIVLMHAPW-YNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 248 ------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
......+|..+.|.+++ +. -+|+++|.|| +..+..+ .-.+.+..++++++.++|||||.|-
T Consensus 150 ~~~~LrYP~weaey~lk~l~elk--~~-r~IlLfhtpPd~~kg~~h-----~GS~~V~dlIk~~~P~ivl~Ghihe 217 (255)
T PF14582_consen 150 EEFKLRYPAWEAEYSLKFLRELK--DY-RKILLFHTPPDLHKGLIH-----VGSAAVRDLIKTYNPDIVLCGHIHE 217 (255)
T ss_dssp CSSS-EEEHHHHHHHHGGGGGCT--SS-EEEEEESS-BTBCTCTBT-----TSBHHHHHHHHHH--SEEEE-SSS-
T ss_pred ccccccchHHHHHHHHHHHHhcc--cc-cEEEEEecCCccCCCccc-----ccHHHHHHHHHhcCCcEEEeccccc
Confidence 01234566677888752 33 4788899999 4433222 2235778899999999999999985
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.07 E-value=4e-10 Score=90.48 Aligned_cols=55 Identities=16% Similarity=0.300 Sum_probs=35.6
Q ss_pred HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh---ccCCeEeCCCCCccc
Q 045849 138 HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA---AYQPWIWTAGNHEID 195 (320)
Q Consensus 138 ~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~P~~~~~GNHD~~ 195 (320)
++++. .+||+||++||++..... .....|..+...+..+. ...|++.++||||..
T Consensus 32 ~~i~~-~~pd~vv~~GDl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 32 TSLWL-LQPDVVFVLGDLFDEGKW--STDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHh-cCCCEEEECCCCCCCCcc--CCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34444 399999999999965332 12234544433333332 258999999999985
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.2e-09 Score=85.64 Aligned_cols=63 Identities=14% Similarity=0.023 Sum_probs=42.8
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+|++++||+|......+.+.++.+...++|.|+++||++. ....+.++.+ ..|++++.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~------------~~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS------------PFVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC------------HHHHHHHHHh--CCceEEEccCCCc
Confidence 5899999999765444444444444237999999999981 1122333332 3589999999997
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.8e-09 Score=86.79 Aligned_cols=59 Identities=22% Similarity=0.226 Sum_probs=41.1
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|++++||+|... ..++++.+...++|.|+++||+++.... . . +....|++.+.||||..
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----~---~-------~~~~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGPL-----N---E-------LELKAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCcccccccc-----c---h-------hhcCCcEEEEeCCCCCc
Confidence 589999999764 3444444443349999999999864321 1 0 23457899999999984
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.1e-09 Score=88.61 Aligned_cols=75 Identities=20% Similarity=0.173 Sum_probs=46.4
Q ss_pred EEEEcCCCCCCcH----HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-cCCeEeCCCCCccc
Q 045849 121 GLIGDLGQSYDSN----VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-YQPWIWTAGNHEID 195 (320)
Q Consensus 121 ~~~gD~~~~~~~~----~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNHD~~ 195 (320)
+++||+|.+.... ..++.+.+...+||+|+++||+++.-............+.+.++.+.. .+|+++++||||+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 6899999875322 233444443237999999999996310000011122344555666654 58999999999984
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.5e-09 Score=87.74 Aligned_cols=59 Identities=22% Similarity=0.381 Sum_probs=36.8
Q ss_pred HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhH-HHHHhhhh-------------------ccCCeEeCCCCCc
Q 045849 134 VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTW-GRFVERSA-------------------AYQPWIWTAGNHE 193 (320)
Q Consensus 134 ~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------------~~~P~~~~~GNHD 193 (320)
...+.+... .+||.|+++||+... ++. .+..|... .++.+-+. ..+|++.++||||
T Consensus 34 ~~~~~~~~~-l~Pd~V~fLGDLfd~-~w~--~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHD 109 (193)
T cd08164 34 HIVSMMQFW-LKPDAVVVLGDLFSS-QWI--DDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHD 109 (193)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCC-Ccc--cHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCccc
Confidence 344455555 499999999999965 443 22344332 22222221 1489999999999
Q ss_pred ccc
Q 045849 194 IDF 196 (320)
Q Consensus 194 ~~~ 196 (320)
...
T Consensus 110 IG~ 112 (193)
T cd08164 110 VGY 112 (193)
T ss_pred CCC
Confidence 974
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.88 E-value=1e-08 Score=89.22 Aligned_cols=173 Identities=15% Similarity=0.095 Sum_probs=87.1
Q ss_pred eEEEEEEcCCCCC------CcHHH----HHHHHhCCCCCc-eEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeE
Q 045849 118 YSFGLIGDLGQSY------DSNVT----LTHYERNPRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWI 186 (320)
Q Consensus 118 ~~f~~~gD~~~~~------~~~~~----l~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (320)
++|+.++|+|... ..... ++++.+. .|| +++.+||++...... +........+.++.+ -.-+
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~--~~~~l~v~~GD~~~~~~~~--~~~~~~~~~~~l~~~---g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAE--NENTLLLDAGDNFDGSPPS--TATKGEANIELMNAL---GYDA 73 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhc--CCCeEEEeCCccCCCccch--hccCCcHHHHHHHhc---CCCE
Confidence 5899999999553 22333 3444443 577 789999999654321 111122233333332 2456
Q ss_pred eCCCCCccccCCCCCCcccCcccceeeeCC-------CCC---CCCCCCcEEEEEeCcE--EEEEEcccCCC-------C
Q 045849 187 WTAGNHEIDFYPEIGETVPFKPYSHRYHVP-------YRA---SGSTAPFWYSIKRASV--YIIVLSSYSAY-------G 247 (320)
Q Consensus 187 ~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p-------~~~---~~~~~~~~ys~~~g~v--~fi~lds~~~~-------~ 247 (320)
.++||||+...... +.........| ..+ .......|..++.+++ .|+++.+.... .
T Consensus 74 ~~~GNHe~d~g~~~-----l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~ 148 (252)
T cd00845 74 VTIGNHEFDYGLDA-----LAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWI 148 (252)
T ss_pred EeeccccccccHHH-----HHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcc
Confidence 78899998643210 01111111111 000 0111233556677774 45555542110 0
Q ss_pred ---CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCccccc
Q 045849 248 ---KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAYE 318 (320)
Q Consensus 248 ---~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y~ 318 (320)
......+-+++..+. .+.+.+.+|++.|-|.... . .+.++ .+||+||+||.|...
T Consensus 149 ~~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~~------------~---~la~~~~giDlvlggH~H~~~ 207 (252)
T cd00845 149 IGLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDDD------------E---ELAEEVPGIDVILGGHTHHLL 207 (252)
T ss_pred cCceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccch------------H---HHHhcCCCccEEEcCCcCccc
Confidence 011223334332222 1246788999999766431 1 12222 589999999999864
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.7e-08 Score=90.55 Aligned_cols=45 Identities=16% Similarity=0.078 Sum_probs=31.2
Q ss_pred CCeEEEEEEcCCCCCCc---------HHHHHHHHhC--CCCCceEEEcccccccCC
Q 045849 116 VPYSFGLIGDLGQSYDS---------NVTLTHYERN--PRKGQTLLFVGDLSYADN 160 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~---------~~~l~~~~~~--~~~~d~vl~~GD~~~~~~ 160 (320)
..+||++++|+|.+... ..+++++++. ..++|+||++||+.+...
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~ 57 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENK 57 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCC
Confidence 46899999999987321 2334433321 148999999999997644
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.6e-08 Score=82.95 Aligned_cols=182 Identities=19% Similarity=0.170 Sum_probs=95.7
Q ss_pred EEEEEcCCCCCCcH-HHHHHHHhC-CCCCceEEEcccccccCCCCCC-------CChhhhhHHHHHhhh-hccCCeEeCC
Q 045849 120 FGLIGDLGQSYDSN-VTLTHYERN-PRKGQTLLFVGDLSYADNYPCH-------DNNRWDTWGRFVERS-AAYQPWIWTA 189 (320)
Q Consensus 120 f~~~gD~~~~~~~~-~~l~~~~~~-~~~~d~vl~~GD~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~P~~~~~ 189 (320)
|++.||+|...... ..+..+.+. ..++|+||++||+......... +...+..|.+.++.. ...+|++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 57899999753221 223333322 2379999999999632211000 001234444444433 2567889999
Q ss_pred CCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcE-----EEEEeCcEEEEEEcccCC---CC--------CChHHH
Q 045849 190 GNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFW-----YSIKRASVYIIVLSSYSA---YG--------KYTPQY 253 (320)
Q Consensus 190 GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~-----ys~~~g~v~fi~lds~~~---~~--------~~~~q~ 253 (320)
||||.... +.+ ++..+ ....+.+ ..+++++++|..|..... +. ..+.++
T Consensus 81 GNHE~~~~-----------l~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~ 145 (262)
T cd00844 81 GNHEASNY-----------LWE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTK 145 (262)
T ss_pred CCCCCHHH-----------HHh---hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHH
Confidence 99996310 100 01000 0011222 235578899998875211 11 112333
Q ss_pred HHHH-------HhcccCCCCCCCEEEEEecccceecCCCCCCc---------------cHHHHHHHHHHHHhCCCcEEEe
Q 045849 254 KWLE-------EELPKVNRSETPWLIVLMHAPWYNSYNYHYME---------------GETMRVMYEPWLVKYKVDVVFA 311 (320)
Q Consensus 254 ~WL~-------~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~l~~~~~v~lvl~ 311 (320)
..+. ..|.... ... -|+++|.||..-....... +..-...+..++++.+...+|+
T Consensus 146 rs~y~~r~~~~~kl~~~~-~~v--DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~ 222 (262)
T cd00844 146 RSAYHVRNIEVFKLKQLK-QPI--DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFS 222 (262)
T ss_pred HHhhhhhHHHHHHHHhcC-CCC--cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEE
Confidence 2211 1122211 123 5999999998754321100 0112346778999999999999
Q ss_pred cCccc-ccc
Q 045849 312 GHVHA-YER 319 (320)
Q Consensus 312 GH~H~-y~R 319 (320)
||.|. |+|
T Consensus 223 gH~H~~f~~ 231 (262)
T cd00844 223 AHLHVKFAA 231 (262)
T ss_pred ecCCcccce
Confidence 99998 553
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.78 E-value=9.2e-08 Score=83.41 Aligned_cols=178 Identities=16% Similarity=0.182 Sum_probs=87.3
Q ss_pred eEEEEEEcCCCCC-------CcHHH----HHHHHhCCCCCc-eEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCe
Q 045849 118 YSFGLIGDLGQSY-------DSNVT----LTHYERNPRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPW 185 (320)
Q Consensus 118 ~~f~~~gD~~~~~-------~~~~~----l~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 185 (320)
++|+.++|.|.-. ..... ++++.++ +++ ++|.+||++...... ...+.+...+.++.+. .-
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~--~~~~l~l~~GD~~~g~~~~--~~~~g~~~~~~l~~l~---~d 73 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE--NPNTLVLFSGDVLSPSLLS--TATKGKQMVPVLNALG---VD 73 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc--CCCEEEEECCCccCCccch--hhcCCccHHHHHHhcC---Cc
Confidence 4788888887311 11223 3333333 567 999999998543211 1111223344444332 23
Q ss_pred EeCCCCCccccCCCC-CC---cccCcccce-eeeCCCC-CCCCCCCcEEEEEeCcE--EEEEEcccCCC------C---C
Q 045849 186 IWTAGNHEIDFYPEI-GE---TVPFKPYSH-RYHVPYR-ASGSTAPFWYSIKRASV--YIIVLSSYSAY------G---K 248 (320)
Q Consensus 186 ~~~~GNHD~~~~~~~-~~---~~~~~~~~~-~f~~p~~-~~~~~~~~~ys~~~g~v--~fi~lds~~~~------~---~ 248 (320)
+.++||||+...... .. ...+ .+.. ....... .....-..|..++.+++ -|+++.+.... . .
T Consensus 74 ~~~~GNHefd~g~~~l~~~~~~~~~-~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~ 152 (257)
T cd07406 74 LACFGNHEFDFGEDQLQKRLGESKF-PWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVR 152 (257)
T ss_pred EEeecccccccCHHHHHHHHhhCCC-CEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcce
Confidence 668999999643110 00 0000 0110 0001110 00011245777888885 45666543211 0 0
Q ss_pred ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCccccc
Q 045849 249 YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAYE 318 (320)
Q Consensus 249 ~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y~ 318 (320)
..+-.+.+++.+++.++.+++.+|++.|.+.... ..+.++ .+||++|+||.|...
T Consensus 153 ~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~d---------------~~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 153 YRDYVETARELVDELREQGADLIIALTHMRLPND---------------KRLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred EcCHHHHHHHHHHHHHhCCCCEEEEEeccCchhh---------------HHHHHhCCCCceEEecccceeE
Confidence 1222333333332222256788999999865210 123333 489999999999753
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.2e-07 Score=80.99 Aligned_cols=183 Identities=15% Similarity=0.079 Sum_probs=89.9
Q ss_pred eEEEEEEcCCCCC-------------CcHHH----HHHHHhCCCCCceEEE-cccccccCCCCCCC----ChhhhhHHHH
Q 045849 118 YSFGLIGDLGQSY-------------DSNVT----LTHYERNPRKGQTLLF-VGDLSYADNYPCHD----NNRWDTWGRF 175 (320)
Q Consensus 118 ~~f~~~gD~~~~~-------------~~~~~----l~~~~~~~~~~d~vl~-~GD~~~~~~~~~~~----~~~~~~~~~~ 175 (320)
++|+.++|+|... ..... ++++.+. +|+.+++ +||++......... ........+.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~--~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ 78 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAE--NPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAA 78 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhc--CCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHH
Confidence 4788999998642 11122 3333333 6777776 99999643211000 0011223344
Q ss_pred HhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCC---------CCCCCCCCCcEEEEEeC-cEE--EEEEccc
Q 045849 176 VERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVP---------YRASGSTAPFWYSIKRA-SVY--IIVLSSY 243 (320)
Q Consensus 176 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p---------~~~~~~~~~~~ys~~~g-~v~--fi~lds~ 243 (320)
++.+ .. -+.++||||+.+.... +....+....| ..+ ......|..++.+ +++ |+++-+.
T Consensus 79 ln~~--g~-d~~~lGNHe~d~g~~~-----l~~~~~~~~~~~l~aNv~~~~~~-~~~~~~~~i~~~~~g~kVgviG~~~~ 149 (277)
T cd07410 79 MNAL--GY-DAGTLGNHEFNYGLDY-----LDKVIKQANFPVLSANVIDADTG-EPFLKPYVILERDVGVKVGIIGLTTP 149 (277)
T ss_pred HHhc--CC-CEEeecccCcccCHHH-----HHHHHHhCCCCEEEEEEEeCCCC-CcccCCEEEEEecCCCEEEEEecCCc
Confidence 4443 23 3667899998643110 01111111111 000 1122346677888 755 4554332
Q ss_pred CC--C-----------CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEE
Q 045849 244 SA--Y-----------GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVV 309 (320)
Q Consensus 244 ~~--~-----------~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lv 309 (320)
.. + ....+..++..+.|++ .+++.+|+++|.+........ ...+.....|.++ -+||++
T Consensus 150 ~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~----~~~~~~~~~la~~~~~vD~I 222 (277)
T cd07410 150 QIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES----LTGENAAYELAEEVPGIDAI 222 (277)
T ss_pred ccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc----cCCccHHHHHHhcCCCCcEE
Confidence 10 0 0111234444445544 467889999998775432100 0111122344445 489999
Q ss_pred EecCccccc
Q 045849 310 FAGHVHAYE 318 (320)
Q Consensus 310 l~GH~H~y~ 318 (320)
|+||.|...
T Consensus 223 lgGHsH~~~ 231 (277)
T cd07410 223 LTGHQHRRF 231 (277)
T ss_pred EeCCCcccc
Confidence 999999753
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=5.1e-07 Score=74.13 Aligned_cols=62 Identities=16% Similarity=0.139 Sum_probs=40.6
Q ss_pred EEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
+|+++||+|.+... ...+.++.+. .++|.|+++||++.. .. ...++.+ ..|++.|.||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~-~~~d~iih~GDi~~~--------~~----~~~l~~~--~~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP-GKIQHVLCTGNLCSK--------ET----YDYLKTI--APDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc-CCCCEEEECCCCCCH--------HH----HHHHHhh--CCceEEEECCCCcc
Confidence 47899999954432 2234455554 379999999999831 12 2233332 23799999999973
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.2e-08 Score=89.34 Aligned_cols=73 Identities=21% Similarity=0.152 Sum_probs=50.7
Q ss_pred eEEEEEEcCCCCC-C--c-------HHH----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-cc
Q 045849 118 YSFGLIGDLGQSY-D--S-------NVT----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AY 182 (320)
Q Consensus 118 ~~f~~~gD~~~~~-~--~-------~~~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 182 (320)
+||++++|+|.+. . . ..+ +..+++. ++||||++||+.+....+ ...-..+.+.++.+. .+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~--~vD~vliAGDlFd~~~Ps---~~a~~~~~~~l~~l~~~~ 75 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEE--KVDFVLIAGDLFDTNNPS---PRALKLFLEALRRLKDAG 75 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHc--cCCEEEEccccccCCCCC---HHHHHHHHHHHHHhccCC
Confidence 5899999999982 1 1 122 3333344 899999999999764422 223345566666654 58
Q ss_pred CCeEeCCCCCccc
Q 045849 183 QPWIWTAGNHEID 195 (320)
Q Consensus 183 ~P~~~~~GNHD~~ 195 (320)
+|++++.||||..
T Consensus 76 Ipv~~I~GNHD~~ 88 (390)
T COG0420 76 IPVVVIAGNHDSP 88 (390)
T ss_pred CcEEEecCCCCch
Confidence 9999999999985
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.3e-08 Score=83.23 Aligned_cols=75 Identities=13% Similarity=0.033 Sum_probs=44.0
Q ss_pred EEEEcCCCCCCcH---HHHHHHHhCC--CCCceEEEcccccccCCCCCCC-Chhhhh-HHHHHhhhhccCCeEeCCCCCc
Q 045849 121 GLIGDLGQSYDSN---VTLTHYERNP--RKGQTLLFVGDLSYADNYPCHD-NNRWDT-WGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 121 ~~~gD~~~~~~~~---~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~P~~~~~GNHD 193 (320)
+++||+|.+.... ..+..+.... .++|.++++||+++.-...... ...... +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 4789999875432 2222222221 3899999999999532111000 011111 2344445567889999999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 81 ~~ 82 (217)
T cd07398 81 FL 82 (217)
T ss_pred HH
Confidence 85
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.2e-07 Score=80.31 Aligned_cols=148 Identities=20% Similarity=0.174 Sum_probs=73.9
Q ss_pred CCc-eEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCC-----
Q 045849 145 KGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYR----- 218 (320)
Q Consensus 145 ~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~----- 218 (320)
.++ ++|.+||++...... .........+.++.+ ... +.++||||+++.... +..+.....+|.-
T Consensus 48 ~~~~l~ld~GD~~~gs~~~--~~~~g~~~~~~ln~~--g~D-~~~lGNHefd~G~~~-----l~~~~~~~~~p~l~aNv~ 117 (281)
T cd07409 48 NPNVLFLNAGDAFQGTLWY--TLYKGNADAEFMNLL--GYD-AMTLGNHEFDDGVEG-----LAPFLNNLKFPVLSANID 117 (281)
T ss_pred CCCEEEEeCCCCCCCcchh--hhcCChHHHHHHHhc--CCC-EEEeccccccCCHHH-----HHHHHHhCCCCEEEEeee
Confidence 555 566699998653321 111122333444432 333 457899999753210 0111111111110
Q ss_pred ---C---CCCCCCcEEEEEeCcE--EEEEEcccCCC------C--CChHHHHHHHHhcccCCCCCCCEEEEEecccceec
Q 045849 219 ---A---SGSTAPFWYSIKRASV--YIIVLSSYSAY------G--KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNS 282 (320)
Q Consensus 219 ---~---~~~~~~~~ys~~~g~v--~fi~lds~~~~------~--~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 282 (320)
+ .......|..++.+++ -|+++-+.... . ...+..+.+++.+++.+..+++.+|++.|.....
T Consensus 118 ~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~- 196 (281)
T cd07409 118 TSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV- 196 (281)
T ss_pred cCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh-
Confidence 0 0011233566778875 45555442210 0 0123345566655554334678899999975421
Q ss_pred CCCCCCccHHHHHHHHHHHHh-CCCcEEEecCcccc
Q 045849 283 YNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAY 317 (320)
Q Consensus 283 ~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 317 (320)
. ..+.++ -+||+|++||.|..
T Consensus 197 -----------d---~~la~~~~giD~IiggH~H~~ 218 (281)
T cd07409 197 -----------D---KEIARKVPGVDVIVGGHSHTF 218 (281)
T ss_pred -----------H---HHHHHcCCCCcEEEeCCcCcc
Confidence 0 123333 48999999999985
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=6.9e-07 Score=77.95 Aligned_cols=182 Identities=15% Similarity=0.160 Sum_probs=86.9
Q ss_pred eEEEEEEcCCCCCC-------cHHHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeC
Q 045849 118 YSFGLIGDLGQSYD-------SNVTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWT 188 (320)
Q Consensus 118 ~~f~~~gD~~~~~~-------~~~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 188 (320)
++|+.++|+|.... ....+..+++.. .+++++|.+||++...... .........+.+.. ...-+ .+
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~ln~--~g~d~-~~ 75 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPIS--DLDKGETIIKIMNA--VGYDA-VT 75 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhh--hhcCCcHHHHHHHh--cCCcE-Ec
Confidence 47899999996421 123333322221 1578999999998543211 11111223333433 23343 57
Q ss_pred CCCCccccCCCCCCcccCcccceeeeCCCC-------C-CCCCCCcEEEEEeC-c--EEEEEEcccCC-C----C--C--
Q 045849 189 AGNHEIDFYPEIGETVPFKPYSHRYHVPYR-------A-SGSTAPFWYSIKRA-S--VYIIVLSSYSA-Y----G--K-- 248 (320)
Q Consensus 189 ~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~-------~-~~~~~~~~ys~~~g-~--v~fi~lds~~~-~----~--~-- 248 (320)
+||||+++... .+....+...+|.- . ....-..|..++.+ + +-|+++-+... . . .
T Consensus 76 ~GNHefd~G~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~~ 150 (257)
T cd07408 76 PGNHEFDYGLD-----RLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKDV 150 (257)
T ss_pred cccccccCCHH-----HHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCCc
Confidence 89999964311 01111111111110 0 00011235555676 5 56666655311 0 0 0
Q ss_pred -ChHHHHHHHHh-cccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCccccc
Q 045849 249 -YTPQYKWLEEE-LPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAYE 318 (320)
Q Consensus 249 -~~~q~~WL~~~-L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y~ 318 (320)
..+-.+-+++. ....++.+++.+|++.|.+....... . . . ..+.++ .+||++|.||.|...
T Consensus 151 ~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~-~----~---~~la~~~~giDvIigGH~H~~~ 214 (257)
T cd07408 151 TFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-W-T----S---TELAANVTGIDLIIDGHSHTTI 214 (257)
T ss_pred EEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-c-c----H---HHHHHhCCCceEEEeCCCcccc
Confidence 01122223332 11111246788999999877543210 0 0 1 122223 489999999999864
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=2e-06 Score=76.34 Aligned_cols=90 Identities=19% Similarity=0.167 Sum_probs=46.4
Q ss_pred cEEEEEeCcE--EEEEEcccCC-C--------C-CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHH
Q 045849 226 FWYSIKRASV--YIIVLSSYSA-Y--------G-KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETM 293 (320)
Q Consensus 226 ~~ys~~~g~v--~fi~lds~~~-~--------~-~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~ 293 (320)
.|..++.+++ -||++-+... . + ....-.+-+++.+++.+..+.+.+|++.|........... ....
T Consensus 138 py~i~~~~G~kIgviGl~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~ 215 (288)
T cd07412 138 PYTIKDVGGVKVGFIGAVTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAA 215 (288)
T ss_pred CEEEEEECCEEEEEEeecCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--cccc
Confidence 4556778875 4556533210 0 0 0122233344444333224678899999987653222110 0011
Q ss_pred HHHHHHHHHh--CCCcEEEecCcccc
Q 045849 294 RVMYEPWLVK--YKVDVVFAGHVHAY 317 (320)
Q Consensus 294 ~~~l~~l~~~--~~v~lvl~GH~H~y 317 (320)
......++.+ -+||++|+||+|..
T Consensus 216 ~~~~~~l~~~~~~~iD~IlgGHsH~~ 241 (288)
T cd07412 216 SGPIADIVNRLDPDVDVVFAGHTHQA 241 (288)
T ss_pred ChhHHHHHhhcCCCCCEEEeCccCcc
Confidence 1122334444 37999999999975
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=8.9e-06 Score=71.70 Aligned_cols=189 Identities=13% Similarity=0.092 Sum_probs=91.8
Q ss_pred CCCeEEEEEEcCCCCCC----------c----HHHHHHHHhC--CCCCc-eEEEcccccccCCCCCCCChhhhhHHHHHh
Q 045849 115 DVPYSFGLIGDLGQSYD----------S----NVTLTHYERN--PRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVE 177 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~----------~----~~~l~~~~~~--~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~ 177 (320)
-..++|+..+|+|.... . .+.++++.+. ...++ ++|.+||..............+....+.++
T Consensus 3 ~~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN 82 (282)
T cd07407 3 WGDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFR 82 (282)
T ss_pred cceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHH
Confidence 35789999999996421 0 1112222221 12454 677899999754332111113344445554
Q ss_pred hhhccCCeEeCCCCCccccCCCC-CC------cccCcccceeeeCCCC--CCCCCCCcEEEEEeC-cE--EEEEEcccCC
Q 045849 178 RSAAYQPWIWTAGNHEIDFYPEI-GE------TVPFKPYSHRYHVPYR--ASGSTAPFWYSIKRA-SV--YIIVLSSYSA 245 (320)
Q Consensus 178 ~~~~~~P~~~~~GNHD~~~~~~~-~~------~~~~~~~~~~f~~p~~--~~~~~~~~~ys~~~g-~v--~fi~lds~~~ 245 (320)
.+. . =+.++||||++..... .. ...+.-.......... ........|..+..+ ++ -||++-+...
T Consensus 83 ~mg--y-Da~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~ 159 (282)
T cd07407 83 MMP--Y-DLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFK 159 (282)
T ss_pred hcC--C-cEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEecccc
Confidence 432 1 2468999999632210 00 0001000000000000 000112335666765 64 4666644221
Q ss_pred C-------CCC--hHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCc-EEEecCc
Q 045849 246 Y-------GKY--TPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVD-VVFAGHV 314 (320)
Q Consensus 246 ~-------~~~--~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~-lvl~GH~ 314 (320)
. ... ..+..|+.+.|++ .+++.+|+++|....... ...+....+.++. ++| ++|.||+
T Consensus 160 ~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii~GHs 228 (282)
T cd07407 160 GAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFLGGHS 228 (282)
T ss_pred cCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEEeCCc
Confidence 0 011 1223488777874 467889999998764321 1111122344444 577 7999999
Q ss_pred ccc
Q 045849 315 HAY 317 (320)
Q Consensus 315 H~y 317 (320)
|..
T Consensus 229 H~~ 231 (282)
T cd07407 229 HVR 231 (282)
T ss_pred ccc
Confidence 953
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.2e-07 Score=78.54 Aligned_cols=146 Identities=16% Similarity=0.113 Sum_probs=71.3
Q ss_pred CCceE-EEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCC------
Q 045849 145 KGQTL-LFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPY------ 217 (320)
Q Consensus 145 ~~d~v-l~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~------ 217 (320)
.+|.+ +.+||+....... .........+.++. .++.++.||||+...... +....+...+|.
T Consensus 50 ~~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~l~~----~g~da~~GNHefd~g~~~-----l~~~~~~~~~~~l~aN~~ 118 (264)
T cd07411 50 NPNTLLLDGGDTWQGSGEA--LYTRGQAMVDALNA----LGVDAMVGHWEFTYGPER-----VRELFGRLNWPFLAANVY 118 (264)
T ss_pred CCCeEEEeCCCccCCChHH--hhcCChhHHHHHHh----hCCeEEecccccccCHHH-----HHHHHhhCCCCEEEEEEE
Confidence 67876 5699999653211 11112223333333 444554599999643210 011111111110
Q ss_pred ---CCCCCCCCcEEEEEeCc--EEEEEEcccCCCC----------CChHHHHHHHHhcccC-CCCCCCEEEEEeccccee
Q 045849 218 ---RASGSTAPFWYSIKRAS--VYIIVLSSYSAYG----------KYTPQYKWLEEELPKV-NRSETPWLIVLMHAPWYN 281 (320)
Q Consensus 218 ---~~~~~~~~~~ys~~~g~--v~fi~lds~~~~~----------~~~~q~~WL~~~L~~~-~~~~~~~~iv~~H~P~~~ 281 (320)
.+.. ....|..++.++ +.||++.+..... ......+.+++.+++. +..+.+.+|++.|-+...
T Consensus 119 ~~~~~~~-~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~ 197 (264)
T cd07411 119 DDEAGER-VFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV 197 (264)
T ss_pred eCCCCCc-ccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh
Confidence 0001 122355667787 4566665431100 0122334444442222 124678899999976532
Q ss_pred cCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCcccc
Q 045849 282 SYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAY 317 (320)
Q Consensus 282 ~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 317 (320)
. . .+.++ .+||++|+||.|..
T Consensus 198 ~--------~-------~la~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 198 D--------V-------ELAERVPGIDVILSGHTHER 219 (264)
T ss_pred h--------H-------HHHhcCCCCcEEEeCccccc
Confidence 1 1 22233 47999999999963
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.50 E-value=9.1e-07 Score=80.03 Aligned_cols=117 Identities=15% Similarity=0.185 Sum_probs=71.9
Q ss_pred CCCeEEEEEEcCCCCCCc-----H---------HHHHH---HHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHh
Q 045849 115 DVPYSFGLIGDLGQSYDS-----N---------VTLTH---YERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVE 177 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~-----~---------~~l~~---~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~ 177 (320)
...+|++.++|.|.-.+. . .-+.+ +.....+||.++++||+.+++.+. ...+|....+.++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~--~~eEf~~~~~Rfk 123 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWA--GDEEFKKRYERFK 123 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccC--ChHHHHHHHHHHH
Confidence 468999999999864311 0 01111 222235999999999999865543 2345655433344
Q ss_pred hh---hccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccC
Q 045849 178 RS---AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYS 244 (320)
Q Consensus 178 ~~---~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~ 244 (320)
.+ ..++|++.++||||.+.....-.. ....|.+.| ++..-+|+.|++.|+++|++.
T Consensus 124 kIf~~k~~~~~~~i~GNhDIGf~~~~~~~-~i~Rfe~~f----------g~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 124 KIFGRKGNIKVIYIAGNHDIGFGNELIPE-WIDRFESVF----------GPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HhhCCCCCCeeEEeCCccccccccccchh-HHHHHHHhh----------cchhhhhccCCceeEEeeehh
Confidence 44 247999999999999753211100 012233322 224456889999999999864
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.4e-06 Score=89.35 Aligned_cols=189 Identities=16% Similarity=0.159 Sum_probs=93.5
Q ss_pred CCCeEEEEEEcCCCCCCcHHH----HHHHHhCCCCCceEEE-cccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCC
Q 045849 115 DVPYSFGLIGDLGQSYDSNVT----LTHYERNPRKGQTLLF-VGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTA 189 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~~~----l~~~~~~~~~~d~vl~-~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (320)
...++|+.++|+|........ ++++.+. +|+.|++ +||++...... .........+.++.+ -.-+.++
T Consensus 658 ~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~--~~~~l~ld~GD~~~gs~~~--~~~~g~~~~~~ln~l---g~d~~~~ 730 (1163)
T PRK09419 658 NWELTILHTNDFHGHLDGAAKRVTKIKEVKEE--NPNTILVDAGDVYQGSLYS--NLLKGLPVLKMMKEM---GYDASTF 730 (1163)
T ss_pred ceEEEEEEEeecccCCCCHHHHHHHHHHHHhh--CCCeEEEecCCCCCCcchh--hhcCChHHHHHHhCc---CCCEEEe
Confidence 356999999999965433333 3444443 7787766 99998543211 111122333344332 2335699
Q ss_pred CCCccccCCCC-----CCcc------cCc----ccc-eeeeCCCCC-CCCCCCcEEEEEeCcE--EEEEEcccCCC----
Q 045849 190 GNHEIDFYPEI-----GETV------PFK----PYS-HRYHVPYRA-SGSTAPFWYSIKRASV--YIIVLSSYSAY---- 246 (320)
Q Consensus 190 GNHD~~~~~~~-----~~~~------~~~----~~~-~~f~~p~~~-~~~~~~~~ys~~~g~v--~fi~lds~~~~---- 246 (320)
||||+.+.... .... .|. .+. ........+ .......|..++.+++ -||++-+....
T Consensus 731 GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~ 810 (1163)
T PRK09419 731 GNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTS 810 (1163)
T ss_pred cccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccC
Confidence 99999643210 0000 000 000 000001010 0111234666778874 56666542110
Q ss_pred ----C--CChHHHHHHHHhcccCC-CCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 247 ----G--KYTPQYKWLEEELPKVN-RSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 247 ----~--~~~~q~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
. ...+..+.+++..++.+ ..+.+.+|++.|......... + ......|.++. +||++|.||+|..
T Consensus 811 p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~----~---~~~~~~lA~~v~gIDvIigGHsH~~ 882 (1163)
T PRK09419 811 PGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT----G---EITGLELAKKVKGVDAIISAHTHTL 882 (1163)
T ss_pred CCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc----c---ccHHHHHHHhCCCCCEEEeCCCCcc
Confidence 0 01222333433333322 146788999999887532111 0 11223444444 7999999999975
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=5.5e-06 Score=71.65 Aligned_cols=172 Identities=16% Similarity=0.121 Sum_probs=87.2
Q ss_pred EEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
||+++||.=..... ...|.++.+. .++||+|..||++.... . -. ....+.+.. ..+- +.+.|||+++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~-g--l~---~~~~~~L~~--~G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKE-YKIDFVIANGENAAGGK-G--IT---PKIAKELLS--AGVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHH-CCCCEEEECCccccCCC-C--CC---HHHHHHHHh--cCCC-EEEecccccC
Confidence 58899998543322 2335555554 37899999999986531 1 01 222233333 2344 4466999996
Q ss_pred cCCCCCCc-ccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC--CCCChHHHHHHHHhcccCCCCCCCEEE
Q 045849 196 FYPEIGET-VPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA--YGKYTPQYKWLEEELPKVNRSETPWLI 272 (320)
Q Consensus 196 ~~~~~~~~-~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~--~~~~~~q~~WL~~~L~~~~~~~~~~~i 272 (320)
.. ..... .....-....++|.. .....|..++.+++++-+++-... ....+.-++-+++.+++.+. +.+.+|
T Consensus 71 ~g-el~~~l~~~~~~l~~aN~~~~---~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D~II 145 (255)
T cd07382 71 KK-EILDFIDEEPRLLRPANYPPG---TPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EADIIF 145 (255)
T ss_pred cc-hHHHHHhcCcCceEeeecCCC---CCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCCEEE
Confidence 43 10000 000000111123321 123346777888766555443211 11122223345555555432 567899
Q ss_pred EEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 273 VLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 273 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
|.+|--..+ .+..+...+ ..+||+|+.||+|..
T Consensus 146 V~~H~g~ts-----------Ek~ala~~l-dg~VdvIvGtHTHv~ 178 (255)
T cd07382 146 VDFHAEATS-----------EKIALGWYL-DGRVSAVVGTHTHVQ 178 (255)
T ss_pred EEECCCCCH-----------HHHHHHHhC-CCCceEEEeCCCCcc
Confidence 999973211 111222111 336999999999974
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.7e-07 Score=77.78 Aligned_cols=65 Identities=22% Similarity=0.184 Sum_probs=40.6
Q ss_pred EEEEcCCCCCCcHHHHHHHHhCC----------CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh-----hccCCe
Q 045849 121 GLIGDLGQSYDSNVTLTHYERNP----------RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS-----AAYQPW 185 (320)
Q Consensus 121 ~~~gD~~~~~~~~~~l~~~~~~~----------~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~P~ 185 (320)
+++||+|.... .+.++++.. .+.|.++++||+++.+. +. .+..+.+..+ ....++
T Consensus 1 ~vi~DIHG~~~---~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~----~~---~~vl~~l~~l~~~~~~~~~~v 70 (208)
T cd07425 1 VAIGDLHGDLD---AFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGP----DV---IEILWLLYKLEQEAAKAGGKV 70 (208)
T ss_pred CEEeCccCCHH---HHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCc----CH---HHHHHHHHHHHHHHHhcCCeE
Confidence 37899997643 333333221 26799999999996532 11 2223333332 235689
Q ss_pred EeCCCCCccc
Q 045849 186 IWTAGNHEID 195 (320)
Q Consensus 186 ~~~~GNHD~~ 195 (320)
+++.||||..
T Consensus 71 ~~l~GNHE~~ 80 (208)
T cd07425 71 HFLLGNHELM 80 (208)
T ss_pred EEeeCCCcHH
Confidence 9999999985
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.9e-07 Score=78.59 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=48.7
Q ss_pred eEEEEEEcCCCCCCc---------HHHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-c-C
Q 045849 118 YSFGLIGDLGQSYDS---------NVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-Y-Q 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~---------~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 183 (320)
+||++++|+|.+... ...++++. .. .++|+||++||+.+.... .......+.++++.+.. . +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~-~~~D~lli~GDi~d~~~p---~~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKA-EQIDALLVAGDVFDTANP---PAEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHH-cCCCEEEECCccCCCCCC---CHHHHHHHHHHHHHHHhcCCc
Confidence 589999999986421 11233332 22 389999999999975431 11223345566666543 3 8
Q ss_pred CeEeCCCCCccc
Q 045849 184 PWIWTAGNHEID 195 (320)
Q Consensus 184 P~~~~~GNHD~~ 195 (320)
|+++++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 999999999984
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.1e-07 Score=72.65 Aligned_cols=65 Identities=15% Similarity=0.192 Sum_probs=39.7
Q ss_pred EEEEcCCCCCCc----------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC
Q 045849 121 GLIGDLGQSYDS----------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP 184 (320)
Q Consensus 121 ~~~gD~~~~~~~----------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (320)
.+++|+|.+... ...++.+.+...++|.||++||++..... . .+.+.++.+ ..|
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~-----~---~~~~~l~~~--~~~ 71 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKA-----G---TELELLSRL--NGR 71 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCCh-----H---HHHHHHHhC--CCC
Confidence 367888876432 11233344433478999999999964321 1 113333332 358
Q ss_pred eEeCCCCCccc
Q 045849 185 WIWTAGNHEID 195 (320)
Q Consensus 185 ~~~~~GNHD~~ 195 (320)
++.++||||..
T Consensus 72 ~~~v~GNHD~~ 82 (168)
T cd07390 72 KHLIKGNHDSS 82 (168)
T ss_pred eEEEeCCCCch
Confidence 99999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.1e-06 Score=79.88 Aligned_cols=191 Identities=15% Similarity=0.121 Sum_probs=102.2
Q ss_pred CCCCCCCeEEEEEEcCCCCCC------------cHHH----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHH
Q 045849 111 EVGPDVPYSFGLIGDLGQSYD------------SNVT----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR 174 (320)
Q Consensus 111 ~~~~~~~~~f~~~gD~~~~~~------------~~~~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~ 174 (320)
.......++|+..+|+|.... .... +++..++ .+..++|.+||++........ ........+
T Consensus 20 ~~~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~-~~~~llld~GD~~~G~~l~~~-~~~g~~~~~ 97 (517)
T COG0737 20 AAAETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAE-NKNVLLLDAGDLIQGSPLSDY-LTKGEPTVD 97 (517)
T ss_pred cccCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhh-cCCeEEEeCCcccCCcccccc-ccCCChHHH
Confidence 334457899999999997532 2212 3334444 255789999999976443221 123333444
Q ss_pred HHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCC--------C-CCCCCCCCcEEEEEeCc--EEEEEEccc
Q 045849 175 FVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVP--------Y-RASGSTAPFWYSIKRAS--VYIIVLSSY 243 (320)
Q Consensus 175 ~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p--------~-~~~~~~~~~~ys~~~g~--v~fi~lds~ 243 (320)
.|..+. .=+.++||||+.+.... +..+.....+| . .........|.-++.++ +-+|++.+.
T Consensus 98 ~mN~m~---yDa~tiGNHEFd~g~~~-----l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~ 169 (517)
T COG0737 98 LLNALG---YDAMTLGNHEFDYGLEA-----LARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTP 169 (517)
T ss_pred HHhhcC---CcEEeecccccccCHHH-----HHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCC
Confidence 554432 22569999999754210 01111111111 1 00111234578888887 456666641
Q ss_pred C--CC---C-----CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecC
Q 045849 244 S--AY---G-----KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGH 313 (320)
Q Consensus 244 ~--~~---~-----~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH 313 (320)
. .+ . ...+..+++++.+.+.+....+-+|++.|.+............. ...... .++|+++.||
T Consensus 170 ~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~-~~~~~~-----~~iD~i~~GH 243 (517)
T COG0737 170 TIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG-DVDVAV-----PGIDLIIGGH 243 (517)
T ss_pred cccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc-cccccc-----cCcceEeccC
Confidence 1 11 1 12345666666666554334788999999988764332111100 000000 3499999999
Q ss_pred cccc
Q 045849 314 VHAY 317 (320)
Q Consensus 314 ~H~y 317 (320)
.|.+
T Consensus 244 ~H~~ 247 (517)
T COG0737 244 SHTV 247 (517)
T ss_pred Cccc
Confidence 9953
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.3e-06 Score=74.76 Aligned_cols=192 Identities=15% Similarity=0.068 Sum_probs=85.8
Q ss_pred eEEEEEEcCCCCCC-------cH----HHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccC
Q 045849 118 YSFGLIGDLGQSYD-------SN----VTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQ 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~-------~~----~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
++|+..+|+|.... .. ..++++.+.. ...-++|.+||+....... .......-.+.++.+ ..
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~--~~~~g~~~~~~~n~~--g~ 76 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPES--DLQDAEPDFRGMNLV--GY 76 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhH--HhcCcchHHHHHHhh--CC
Confidence 47899999987421 11 1233333220 1345899999998542211 111112223334432 23
Q ss_pred CeEeCCCCCccccCCCC-CC---cccCcccceeeeCCCCCCCCCCCcEEEEEeCcEE--EEEEcccCC-C-------CC-
Q 045849 184 PWIWTAGNHEIDFYPEI-GE---TVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVY--IIVLSSYSA-Y-------GK- 248 (320)
Q Consensus 184 P~~~~~GNHD~~~~~~~-~~---~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~--fi~lds~~~-~-------~~- 248 (320)
- +.++||||+++.... .. ...+.-......... + ......|..++.++++ |+++-+... . ..
T Consensus 77 D-a~~~GNHEfD~G~~~L~~~~~~~~fp~l~aNv~~~~-g-~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~~~~ 153 (285)
T cd07405 77 D-AMAVGNHEFDNPLEVLRQQMKWANFPLLSANIYQES-G-ERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYFEGI 153 (285)
T ss_pred c-EEeecccccccCHHHHHHHHhhCCCCEEEEEEEecC-C-CCccCCeEEEEECCEEEEEEEecccccccccCcCCcCCc
Confidence 3 447799999754211 00 000100000000010 1 0112346667788755 555544211 0 00
Q ss_pred -ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 249 -YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 249 -~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
..+..+=+++.+++.+..+++.+|++.|.......... ........+...+...+||++|.||+|..-
T Consensus 154 ~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~--~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 154 EFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHG--SNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred EEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCcccc--ccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 01111112222222211367889999998875322110 000111122222223589999999999753
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.5e-05 Score=67.79 Aligned_cols=174 Identities=15% Similarity=0.067 Sum_probs=91.2
Q ss_pred eEEEEEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+||+++||.=.... ....|.++.+. .++||+|..||++-.+ .. -. ....+.+.. ..+-++ +.|||++
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~-~~~D~vIaNgEn~~gG-~G-i~----~~~~~~L~~--~GvDvi-T~GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSK-YQADLVIANGENTTHG-KG-LT----LKIYEFLKQ--SGVNYI-TMGNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHh-CCCCEEEEcCcccCCC-CC-CC----HHHHHHHHh--cCCCEE-Eccchhc
Confidence 58999999854321 12334555555 3789999999998542 11 01 122222222 345555 4599999
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccC-CCC-C--ChHHHHHHHHhcccCCCCCCCE
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYS-AYG-K--YTPQYKWLEEELPKVNRSETPW 270 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~-~~~-~--~~~q~~WL~~~L~~~~~~~~~~ 270 (320)
+..................++|.. .....|..+..++..+-+++-.. .+. . ...-++-+++.+++.+ .+++.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 743100000000111112233321 12234566777876666655321 111 1 1222233444444432 24678
Q ss_pred EEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 271 LIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 271 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
+||.+|--. ... +.....+-+.+|++|+.-|+|.-
T Consensus 147 IIVd~Haea-----------tsE-K~a~~~~ldg~vsaVvGtHtHV~ 181 (266)
T TIGR00282 147 IFVDFHAET-----------TSE-KNAFGMAFDGYVTAVVGTHTHVP 181 (266)
T ss_pred EEEEeCCCC-----------HHH-HHHHHHHhCCCccEEEeCCCCCC
Confidence 999999532 112 34456666889999999999974
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.3e-06 Score=69.21 Aligned_cols=117 Identities=19% Similarity=0.120 Sum_probs=74.1
Q ss_pred EEEEcCCCCCC-cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhh-hhccCCeEeCCCCCccccCC
Q 045849 121 GLIGDLGQSYD-SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER-SAAYQPWIWTAGNHEIDFYP 198 (320)
Q Consensus 121 ~~~gD~~~~~~-~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~~~~~GNHD~~~~~ 198 (320)
+++||.+.... ....++++.+...+.|++|++||+..... +. +.|...... ....+|+|++-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~----~~---~~~~~y~~g~~~~pipTyf~ggn~~----- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDE----DD---EELEAYKDGSKKVPIPTYFLGGNNP----- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCcc----ch---hhHHHHhcCCccCCCCEEEECCCCC-----
Confidence 36788876532 12334444444468899999999985432 11 334444332 346789999999997
Q ss_pred CCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEeccc
Q 045849 199 EIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAP 278 (320)
Q Consensus 199 ~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P 278 (320)
+.-|+++|.|
T Consensus 69 ----------------------------------------------------------------------~~DILlTh~w 78 (150)
T cd07380 69 ----------------------------------------------------------------------GVDILLTSEW 78 (150)
T ss_pred ----------------------------------------------------------------------CCCEEECCCC
Confidence 2247888888
Q ss_pred ceecCCCCCC-----ccHHHHHHHHHHHHhCCCcEEEecCcc-cccc
Q 045849 279 WYNSYNYHYM-----EGETMRVMYEPWLVKYKVDVVFAGHVH-AYER 319 (320)
Q Consensus 279 ~~~~~~~~~~-----~~~~~~~~l~~l~~~~~v~lvl~GH~H-~y~R 319 (320)
|+........ ....-...+..++++.+....||||.| .|||
T Consensus 79 P~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer 125 (150)
T cd07380 79 PKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYER 125 (150)
T ss_pred chhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEee
Confidence 8664211100 011123466778889999999999999 8887
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.1e-06 Score=81.30 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=46.6
Q ss_pred eEEEEEEcCCCCCCc----H-----HHHHH---HHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-ccCC
Q 045849 118 YSFGLIGDLGQSYDS----N-----VTLTH---YERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AYQP 184 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~----~-----~~l~~---~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P 184 (320)
+||++++|+|.+... . ..+.. ++.. .+||+||++||+.+.... .......+.+++..+. ..+|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~-~~~D~viIaGDifD~~~p---~~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQE-HQVDAIIVAGDIFDTGSP---PSYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHh-cCCCEEEECCccccCCCC---cHHHHHHHHHHHHHHHhcCCc
Confidence 589999999987421 0 11222 2223 399999999999965321 1111223344444443 3589
Q ss_pred eEeCCCCCccc
Q 045849 185 WIWTAGNHEID 195 (320)
Q Consensus 185 ~~~~~GNHD~~ 195 (320)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999985
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=6.5e-06 Score=66.75 Aligned_cols=64 Identities=14% Similarity=0.025 Sum_probs=42.1
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
++|+++||+|..........++... .++|+|||+||.+.... ...+... -..++++|.||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~-~~~d~vih~GD~~~~~~--------~~~l~~~-----~~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNL-EKVDAVIHAGDSTSPFT--------LDALEGG-----LAAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhh-cCCCEEEECCCcCCccc--------hHHhhcc-----cccceEEEEccCCCc
Confidence 6899999999876422222223333 49999999999995421 1111111 146899999999985
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=3e-06 Score=76.95 Aligned_cols=75 Identities=16% Similarity=0.055 Sum_probs=46.3
Q ss_pred eEEEEEEcCCCCCCc---------HHHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHH-HHhhhh-ccC
Q 045849 118 YSFGLIGDLGQSYDS---------NVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR-FVERSA-AYQ 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~---------~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~ 183 (320)
+||+++||+|.+... ...+++++ .. .++|+||++||+.+..... .......... +++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~-~~vD~VliaGDlfD~~~~~--~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKA-HGITTWIQLGDTFDVRKAI--TQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHH-cCCCEEEECCcccCCCCCC--CHHHHHHHHHHHHHHHHHCCC
Confidence 589999999987431 12333332 22 3999999999999653211 1112222222 233442 479
Q ss_pred CeEeCCCCCccc
Q 045849 184 PWIWTAGNHEID 195 (320)
Q Consensus 184 P~~~~~GNHD~~ 195 (320)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999984
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.4e-05 Score=75.78 Aligned_cols=192 Identities=13% Similarity=0.076 Sum_probs=89.1
Q ss_pred CCCeEEEEEEcCCCCCC-------cHHH----HHHHHhC---CCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh
Q 045849 115 DVPYSFGLIGDLGQSYD-------SNVT----LTHYERN---PRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~-------~~~~----l~~~~~~---~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
...++|+.++|+|.... .... ++++.+. ....-++|.+||+....... .-.......+.+..+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s--~~~~g~~~i~~mN~~- 108 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPES--DLQDAEPDFRGMNLI- 108 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhh--hhcCCchhHHHHhcC-
Confidence 45899999999997532 1222 2333221 11345889999998542110 111112223334332
Q ss_pred ccCCeEeCCCCCccccCCCC-C---CcccCcccceeeeCCCCCCCCCCCcEEEEEeCcE--EEEEEcccCC--C------
Q 045849 181 AYQPWIWTAGNHEIDFYPEI-G---ETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASV--YIIVLSSYSA--Y------ 246 (320)
Q Consensus 181 ~~~P~~~~~GNHD~~~~~~~-~---~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v--~fi~lds~~~--~------ 246 (320)
..- +.++||||+++.... . ....|.-..........+. .....|..++.+++ -||++-+... +
T Consensus 109 -g~D-a~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~-~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~~ 185 (551)
T PRK09558 109 -GYD-AMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGE-RLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEYF 185 (551)
T ss_pred -CCC-EEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCC-cccCCeEEEEECCEEEEEEEEeccccccccCCCCc
Confidence 222 457899999754211 0 0000100000010111111 11234666788875 4566544211 0
Q ss_pred C--CChHHHHHHHHhcccCC-CCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC---CCcEEEecCcccc
Q 045849 247 G--KYTPQYKWLEEELPKVN-RSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY---KVDVVFAGHVHAY 317 (320)
Q Consensus 247 ~--~~~~q~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~---~v~lvl~GH~H~y 317 (320)
. ...+..+-+++.+++.+ ..+.+.+|++.|.......... ...... ..+.++. +||++|.||+|.+
T Consensus 186 ~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~--~~~~~d---~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 186 TDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG--SNAPGD---VEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred CCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC--CCCccH---HHHHHhCCccCceEEEeCCCCcc
Confidence 0 01112222333222221 1467889999998875322110 000000 2334443 7999999999964
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.4e-06 Score=68.92 Aligned_cols=75 Identities=12% Similarity=0.072 Sum_probs=44.3
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCC-CChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCH-DNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
+|++++||+|......+.+.+..+. .++|.|+++||+++....... .........+.++. ...+++.+.||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~--~~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNA--YADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHh--cCCceEEEccCCcch
Confidence 5899999999654322333333333 389999999999864221000 00012223333333 235899999999974
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.6e-05 Score=71.28 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=25.9
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
.+.+.+|+++|..-+. .. ..|.++. +||++|.||+|.+
T Consensus 206 ~gvD~II~LsH~g~~~-------~d-------~~lA~~v~gIDvIigGHsH~~ 244 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IE-------QALAALLSGVDVIIAGGSNTL 244 (313)
T ss_pred CCCCEEEEEecccccc-------hH-------HHHHhcCCCCCEEEeCCCCcc
Confidence 4577899999973111 01 1344454 8999999999975
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.9e-06 Score=70.30 Aligned_cols=70 Identities=19% Similarity=0.213 Sum_probs=43.2
Q ss_pred EEEcCCCCCCcH---HHHHHHHh-CCCCCceEEEcccccccCCCCCCCChhhhhHHH----HHhhh-hccCCeEeCCCCC
Q 045849 122 LIGDLGQSYDSN---VTLTHYER-NPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR----FVERS-AAYQPWIWTAGNH 192 (320)
Q Consensus 122 ~~gD~~~~~~~~---~~l~~~~~-~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~P~~~~~GNH 192 (320)
++||.|.+.... ..+...++ ...+.|.+.++||++. ++...+ .|.++.+ .+..+ .+.+|+|++.|||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~g~~--~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~ 77 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWIGDD--EPPQLHRQVAQKLLRLARKGTRVYYIHGNH 77 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhhcCC--cccHHHHHHHHHHHHHHhcCCeEEEecCch
Confidence 689999984332 22334333 3236699999999994 332221 3444322 22222 4569999999999
Q ss_pred ccc
Q 045849 193 EID 195 (320)
Q Consensus 193 D~~ 195 (320)
|+.
T Consensus 78 Dfl 80 (237)
T COG2908 78 DFL 80 (237)
T ss_pred HHH
Confidence 974
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.4e-05 Score=75.65 Aligned_cols=145 Identities=20% Similarity=0.188 Sum_probs=70.7
Q ss_pred CCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCC-------
Q 045849 145 KGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPY------- 217 (320)
Q Consensus 145 ~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~------- 217 (320)
..-++|.+||++...... .......-...+..+. -=+.++||||+++.... +..+.....+|.
T Consensus 49 ~n~l~ldaGD~~~gs~~~--~~~~g~~~i~~~N~~g---~Da~~lGNHEFd~G~~~-----l~~~~~~~~fp~l~aNv~~ 118 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYF--TLFGGRADAALMNAAG---FDFFTLGNHEFDAGNEG-----LKEFLEPLEIPVLSANVIP 118 (550)
T ss_pred CCeEEEECCCCCCCccch--hhcCCHHHHHHHhccC---CCEEEeccccccCCHHH-----HHHHHHhCCCCEEEEeeec
Confidence 345889999998643211 1111122233333221 23568999999753210 011111111111
Q ss_pred --CC-CCCCCCcEEEEEeCc--EEEEEEcccCC-C---CC-----ChHHHHHHH---HhcccCCCCCCCEEEEEecccce
Q 045849 218 --RA-SGSTAPFWYSIKRAS--VYIIVLSSYSA-Y---GK-----YTPQYKWLE---EELPKVNRSETPWLIVLMHAPWY 280 (320)
Q Consensus 218 --~~-~~~~~~~~ys~~~g~--v~fi~lds~~~-~---~~-----~~~q~~WL~---~~L~~~~~~~~~~~iv~~H~P~~ 280 (320)
.. ....-..|..++.++ +-||+|.+... . .. ..+..+=++ +.|++ .+.+.+|++.|....
T Consensus 119 ~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II~lsH~g~~ 195 (550)
T TIGR01530 119 DAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKIILLSHAGFE 195 (550)
T ss_pred CCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEEEEecCCcH
Confidence 00 001123466677787 56777754211 0 00 011111122 33443 457889999997532
Q ss_pred ecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 281 NSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
. . ..+.++. +||++|+||+|.+
T Consensus 196 ~--------d-------~~la~~~~~iD~IigGHsH~~ 218 (550)
T TIGR01530 196 K--------N-------CEIAQKINDIDVIVSGDSHYL 218 (550)
T ss_pred H--------H-------HHHHhcCCCCCEEEeCCCCcc
Confidence 1 0 1233343 8999999999985
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.01 E-value=8.9e-06 Score=66.48 Aligned_cols=49 Identities=20% Similarity=0.226 Sum_probs=31.8
Q ss_pred CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 144 RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 144 ~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
.+||.||++||+++.... .....+.... ........+|++.++||||..
T Consensus 40 ~~~d~lii~GDl~~~~~~--~~~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 40 YGPERLIILGDLKHSFGG--LSRQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred cCCCEEEEeCcccccccc--cCHHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 389999999999965321 1111122211 233334678999999999985
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.7e-05 Score=67.93 Aligned_cols=72 Identities=14% Similarity=0.225 Sum_probs=42.3
Q ss_pred eEEEEEEcCCCCCCcH-HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSN-VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
++++++||+|...... ..++.+.......|.++++||+++.+.. ..+.....++.+....++++++||||..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~------s~~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKR------SKDVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCC------hHHHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 4789999999653222 2223332221135999999999975321 1122222222223346899999999974
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00011 Score=73.29 Aligned_cols=195 Identities=14% Similarity=0.088 Sum_probs=91.7
Q ss_pred CCCCCCCCCCeEEEEEEcCCCCCC-------------cHH----HHHHHHhCCCCCceEEEcccccccCCCCCCCC----
Q 045849 108 TPPEVGPDVPYSFGLIGDLGQSYD-------------SNV----TLTHYERNPRKGQTLLFVGDLSYADNYPCHDN---- 166 (320)
Q Consensus 108 t~p~~~~~~~~~f~~~gD~~~~~~-------------~~~----~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~---- 166 (320)
+.|..+....++|+..+|+|.... ... .++++.+. ...-++|.+||++....+.....
T Consensus 106 ~~~~~~~~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae-~~NtLllD~GD~iQGSpl~~~~a~~~~ 184 (814)
T PRK11907 106 SKPVEGQTVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKE-NPNVVLVDNGDTIQGTPLGTYKAIVDP 184 (814)
T ss_pred CCCccCCceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHh-CCCEEEEecCCCCCCCcccchhhhccc
Confidence 344445556899999999997521 111 23334333 13358899999997543211000
Q ss_pred -hhh--hhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCC---------CCCCCCCCcEEEEEe--
Q 045849 167 -NRW--DTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPY---------RASGSTAPFWYSIKR-- 232 (320)
Q Consensus 167 -~~~--~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~---------~~~~~~~~~~ys~~~-- 232 (320)
... .-..+.|..+.- =..++||||+++.... +..+.....+|. .+. ..-..|--++.
T Consensus 185 ~~~g~~~P~i~amN~LGy---DA~tLGNHEFDyG~d~-----L~~~l~~a~fPvl~ANV~~~~~~~-~~~~PY~I~e~~~ 255 (814)
T PRK11907 185 VEEGEQHPMYAALEALGF---DAGTLGNHEFNYGLDY-----LEKVIATANMPIVNANVLDPTTGD-FLYTPYTIVTKTF 255 (814)
T ss_pred cccCcchHHHHHHhccCC---CEEEechhhcccCHHH-----HHHHHHhCCCCEEEeeeeecCCCC-ccCCCeEEEEEEE
Confidence 000 112334443321 2568999999754211 011111111111 000 01123444443
Q ss_pred ---Cc------EEEEEEcccC--CCC--------CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHH
Q 045849 233 ---AS------VYIIVLSSYS--AYG--------KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETM 293 (320)
Q Consensus 233 ---g~------v~fi~lds~~--~~~--------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~ 293 (320)
++ |-||++-+.. .+. ...+-.+-+++...+.+..+++.+|++.|..+.........++ .
T Consensus 256 ~d~~G~~~~vKIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En--~ 333 (814)
T PRK11907 256 TDTEGKKVTLNIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEEN--V 333 (814)
T ss_pred ecCCCcccceEEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccc--h
Confidence 32 5667664421 111 0122223333333332224688899999987643221110111 1
Q ss_pred HHHHHHHHHhCCCcEEEecCcccc
Q 045849 294 RVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 294 ~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
. ..|.+--+||++|.||+|..
T Consensus 334 ~---~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 334 G---YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred h---hHHhcCCCCCEEEECCCCCc
Confidence 1 12333348999999999974
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.3e-05 Score=78.96 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=30.5
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
.+++.+|++.|...-...... .. ......|.++. +||++|.||+|..
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~--~~---en~~~~la~~~~gID~Il~GHsH~~ 280 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSS--GA---EDSVYDLAEKTKGIDAIVAGHQHGL 280 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCC--Cc---chHHHHHHHhCCCCcEEEeCCCccc
Confidence 568889999998875432111 11 12233455454 8999999999975
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.7e-05 Score=67.36 Aligned_cols=66 Identities=29% Similarity=0.318 Sum_probs=42.4
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
++++++||+|..... +.++++.. .+.|.++++||+++.+. + -.+..+.+..+ ..+++++.||||.
T Consensus 1 M~~~vIGDIHG~~~~---l~~ll~~~~~~~~~D~li~lGDlVdrGp----~---s~~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCYDE---LQRLLEKIDFDPAKDTLWLVGDLVNRGP----D---SLEVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCHHH---HHHHHHhcCCCCCCCEEEEeCCccCCCc----C---HHHHHHHHHhc--CCCeEEEecChhH
Confidence 468999999976433 33333321 26899999999997532 1 12233333333 3468899999998
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 69 ~ 69 (275)
T PRK00166 69 H 69 (275)
T ss_pred H
Confidence 4
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.79 E-value=4e-05 Score=64.57 Aligned_cols=63 Identities=21% Similarity=0.128 Sum_probs=40.5
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|++++||+|... ..+.++.+.. .++|.++++||+++.+.. . .+..+.+ .. .+++++.||||..
T Consensus 2 ri~~isDiHg~~---~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~-----~--~~~~~~l---~~-~~~~~v~GNhe~~ 67 (207)
T cd07424 2 RDFVVGDIHGHY---SLLQKALDAVGFDPARDRLISVGDLIDRGPE-----S--LACLELL---LE-PWFHAVRGNHEQM 67 (207)
T ss_pred CEEEEECCCCCH---HHHHHHHHHcCCCCCCCEEEEeCCcccCCCC-----H--HHHHHHH---hc-CCEEEeECCChHH
Confidence 689999999653 3444443321 268999999999965321 1 1222222 22 4689999999975
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.76 E-value=7.2e-05 Score=64.70 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=46.6
Q ss_pred EEEEcCCCCCCc--H---HHHHHHHhCC----CCCceEEEcccccccCCCCCC-C--------ChhhhhHHHHHhhhhcc
Q 045849 121 GLIGDLGQSYDS--N---VTLTHYERNP----RKGQTLLFVGDLSYADNYPCH-D--------NNRWDTWGRFVERSAAY 182 (320)
Q Consensus 121 ~~~gD~~~~~~~--~---~~l~~~~~~~----~~~d~vl~~GD~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~ 182 (320)
++++|+|.+... . ..+.+.++.. .++|.||++||++........ . ...+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 678999976432 1 1223332221 257999999999965211000 0 01234456666777778
Q ss_pred CCeEeCCCCCccc
Q 045849 183 QPWIWTAGNHEID 195 (320)
Q Consensus 183 ~P~~~~~GNHD~~ 195 (320)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999984
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=97.76 E-value=9.9e-05 Score=70.44 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=51.9
Q ss_pred CCCeEEEEEEcCCCCCCc--H---HHHHHHHh-C-------CCCCceEEEcccccccCCCCCC-C--------ChhhhhH
Q 045849 115 DVPYSFGLIGDLGQSYDS--N---VTLTHYER-N-------PRKGQTLLFVGDLSYADNYPCH-D--------NNRWDTW 172 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~--~---~~l~~~~~-~-------~~~~d~vl~~GD~~~~~~~~~~-~--------~~~~~~~ 172 (320)
...+++++++|+|.+... . ..+.+.+. . ..+++.+|++||++...+.... + ..+.+.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 457899999999977532 1 12222222 0 1378999999999964221100 0 0112345
Q ss_pred HHHHhhhhccCCeEeCCCCCccc
Q 045849 173 GRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 173 ~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
.++++.+...+|+++++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 56667777789999999999984
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.74 E-value=7e-05 Score=64.37 Aligned_cols=67 Identities=28% Similarity=0.385 Sum_probs=42.6
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC------------CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeE
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP------------RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWI 186 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~------------~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (320)
||+++||+|.... .|+++++.. .+.|.++++||+++.+. ...+..+.+..+.....++
T Consensus 2 ~i~vigDIHG~~~---~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~-------~s~evl~~l~~l~~~~~~~ 71 (234)
T cd07423 2 PFDIIGDVHGCYD---ELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGP-------DSPEVLRLVMSMVAAGAAL 71 (234)
T ss_pred CeEEEEECCCCHH---HHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCC-------CHHHHHHHHHHHhhCCcEE
Confidence 7899999997643 333333321 13689999999997532 1123334444443334688
Q ss_pred eCCCCCccc
Q 045849 187 WTAGNHEID 195 (320)
Q Consensus 187 ~~~GNHD~~ 195 (320)
++.||||..
T Consensus 72 ~v~GNHE~~ 80 (234)
T cd07423 72 CVPGNHDNK 80 (234)
T ss_pred EEECCcHHH
Confidence 999999974
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.67 E-value=9.8e-05 Score=62.86 Aligned_cols=72 Identities=19% Similarity=0.261 Sum_probs=46.8
Q ss_pred eEEEEEEcCCCCCCc--------------HHHHHHHHhC--CCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc
Q 045849 118 YSFGLIGDLGQSYDS--------------NVTLTHYERN--PRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA 181 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~--------------~~~l~~~~~~--~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
-+.++++|+|.+... ...++++.+. ..+||.||++||+...... ...+..+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~----~~~~~~~~~~l~~~-- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKK----GLEWRFIREFIEVT-- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCC----hHHHHHHHHHHHhc--
Confidence 357899999987421 1334444331 1379999999999965331 13345555555543
Q ss_pred cCCeEeCCCCCccc
Q 045849 182 YQPWIWTAGNHEID 195 (320)
Q Consensus 182 ~~P~~~~~GNHD~~ 195 (320)
..+++.++||||..
T Consensus 89 ~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 89 FRDLILIRGNHDAL 102 (225)
T ss_pred CCcEEEECCCCCCc
Confidence 35899999999974
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00021 Score=62.99 Aligned_cols=179 Identities=23% Similarity=0.264 Sum_probs=96.5
Q ss_pred eEEEEEEcCCCCCC-cHHHHHHHHhC-CCCCceEEEcccccccCCCC-CCC---ChhhhhHHHHHh----hhhccCCeEe
Q 045849 118 YSFGLIGDLGQSYD-SNVTLTHYERN-PRKGQTLLFVGDLSYADNYP-CHD---NNRWDTWGRFVE----RSAAYQPWIW 187 (320)
Q Consensus 118 ~~f~~~gD~~~~~~-~~~~l~~~~~~-~~~~d~vl~~GD~~~~~~~~-~~~---~~~~~~~~~~~~----~~~~~~P~~~ 187 (320)
+||+|-|++|..-+ ..+++..+.+. ..+.|++|+.||.-.-.+.. ... ...+.....+++ +..+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 58999999997643 34555555543 24889999999995322110 000 122223233332 3457789999
Q ss_pred CCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEE-----EEEeCcEEEEEEccc---CCCCC-------C---
Q 045849 188 TAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWY-----SIKRASVYIIVLSSY---SAYGK-------Y--- 249 (320)
Q Consensus 188 ~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~y-----s~~~g~v~fi~lds~---~~~~~-------~--- 249 (320)
+=||||... |... +|..+ ....+.|| ...+|+||+-+|..- .+|.. +
T Consensus 81 IGGNHEAsn------------yL~e--LpyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEASN------------YLQE--LPYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHHH------------HHHh--cccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 999999852 2211 22211 11234454 357789999888751 12211 0
Q ss_pred -------hHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCC-----ccHHH----------HHHHHHHHHhCCCc
Q 045849 250 -------TPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYM-----EGETM----------RVMYEPWLVKYKVD 307 (320)
Q Consensus 250 -------~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~-----~~~~~----------~~~l~~l~~~~~v~ 307 (320)
..+.+=+ .|... +.+--|.+.|-=|-+-...... ...-+ ...+..||++.+..
T Consensus 146 tiRsiYHvR~~dV~--~Lkql---k~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~ 220 (456)
T KOG2863|consen 146 TIRSIYHVRISDVA--KLKQL---KHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQ 220 (456)
T ss_pred hhhhhhhhhhhhhH--HHHhh---cCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcc
Confidence 1222211 12221 2233477788644332111100 00111 23678899999999
Q ss_pred EEEecCccc
Q 045849 308 VVFAGHVHA 316 (320)
Q Consensus 308 lvl~GH~H~ 316 (320)
.+|+.|.|+
T Consensus 221 yWfsAHLH~ 229 (456)
T KOG2863|consen 221 YWFSAHLHV 229 (456)
T ss_pred hhhhhhHhh
Confidence 999999996
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=9.7e-05 Score=63.92 Aligned_cols=68 Identities=21% Similarity=0.280 Sum_probs=41.8
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCC-----------CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeE
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNP-----------RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWI 186 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~-----------~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (320)
+|+.++||+|.... .|.++++.. .+-|.++++||+++.+.. . .+..+.+..+...-.++
T Consensus 1 ~~~~vIGDIHG~~~---~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~---S----~~vl~~~~~~~~~~~~~ 70 (245)
T PRK13625 1 MKYDIIGDIHGCYQ---EFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPH---S----LRMIEIVWELVEKKAAY 70 (245)
T ss_pred CceEEEEECccCHH---HHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcC---h----HHHHHHHHHHhhCCCEE
Confidence 46899999997643 333333321 134789999999976421 1 12223333333345789
Q ss_pred eCCCCCccc
Q 045849 187 WTAGNHEID 195 (320)
Q Consensus 187 ~~~GNHD~~ 195 (320)
++.||||..
T Consensus 71 ~l~GNHE~~ 79 (245)
T PRK13625 71 YVPGNHCNK 79 (245)
T ss_pred EEeCccHHH
Confidence 999999964
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00026 Score=69.36 Aligned_cols=46 Identities=24% Similarity=0.285 Sum_probs=28.1
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
.+++.+|++.|...-...... ..+... ..+.+. +||++|+||+|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~--~~en~~----~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQP--GAENSA----YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCcccc--ccchHH----HHHhcCCCCCEEEcCCCCcc
Confidence 467889999998765421110 111111 123444 8999999999974
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00014 Score=61.83 Aligned_cols=63 Identities=22% Similarity=0.211 Sum_probs=40.0
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|++++||+|.... .++++++.. .+.|.++++||+++.+.. . .+..+.++ . ..++++.||||..
T Consensus 16 ri~visDiHg~~~---~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~----~---~~~l~~l~---~-~~~~~v~GNHE~~ 81 (218)
T PRK09968 16 HIWVVGDIHGEYQ---LLQSRLHQLSFCPETDLLISVGDNIDRGPE----S---LNVLRLLN---Q-PWFISVKGNHEAM 81 (218)
T ss_pred eEEEEEeccCCHH---HHHHHHHhcCCCCCCCEEEECCCCcCCCcC----H---HHHHHHHh---h-CCcEEEECchHHH
Confidence 8999999997643 333333221 367999999999975321 1 12222222 2 3578899999974
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0017 Score=64.79 Aligned_cols=46 Identities=24% Similarity=0.188 Sum_probs=28.0
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
.+++.+|++.|...-..... .+.+. .-.. +++. +||+||.||+|..
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~en--a~~~-l~~v~gID~IlgGHsH~~ 289 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGMEN--ASYY-LTEVPGVDAVLMGHSHTE 289 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccchh--hhHH-HhcCCCCCEEEECCCCCc
Confidence 46788999999876432111 11111 1111 3444 8999999999975
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00018 Score=61.05 Aligned_cols=63 Identities=24% Similarity=0.199 Sum_probs=39.9
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|++++||+|.... .|+++++.. .+.|-++++||+++.+.. . .+-.+.+.. ..++++.||||..
T Consensus 18 ri~vigDIHG~~~---~L~~lL~~i~~~~~~D~li~lGDlvDrGp~----s---~~vl~~l~~----~~~~~v~GNHE~~ 83 (218)
T PRK11439 18 HIWLVGDIHGCFE---QLMRKLRHCRFDPWRDLLISVGDLIDRGPQ----S---LRCLQLLEE----HWVRAVRGNHEQM 83 (218)
T ss_pred eEEEEEcccCCHH---HHHHHHHhcCCCcccCEEEEcCcccCCCcC----H---HHHHHHHHc----CCceEeeCchHHH
Confidence 8999999997643 333333322 257899999999975431 1 122222222 2467899999974
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00026 Score=60.30 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=40.4
Q ss_pred EEEEEcCCCCCCcHHH-HHHHHhCC------CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCC
Q 045849 120 FGLIGDLGQSYDSNVT-LTHYERNP------RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNH 192 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~-l~~~~~~~------~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 192 (320)
+.++||+|........ ++++.... ...|.+|++||+++.+.. -....+.+..+...-.++++.|||
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~-------S~~vl~~l~~l~~~~~~~~l~GNH 73 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPE-------IRELLEIVKSMVDAGHALAVMGNH 73 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCC-------HHHHHHHHHHhhcCCCEEEEEccC
Confidence 3689999976543322 22221110 135799999999976431 122233344443334688999999
Q ss_pred ccc
Q 045849 193 EID 195 (320)
Q Consensus 193 D~~ 195 (320)
|..
T Consensus 74 E~~ 76 (222)
T cd07413 74 EFN 76 (222)
T ss_pred cHH
Confidence 974
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00029 Score=61.09 Aligned_cols=63 Identities=29% Similarity=0.316 Sum_probs=39.8
Q ss_pred EEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 121 GLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 121 ~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
.++||+|.... .++++++.. .+.|.++++||+++.+. + -.+..+.+..+. ..+..+.||||..
T Consensus 2 yvIGDIHG~~~---~L~~LL~~i~~~~~~D~Li~lGDlVdRGp----~---s~evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYD---ELQRLLEKINFDPAKDRLWLVGDLVNRGP----D---SLETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHH---HHHHHHHhcCCCCCCCEEEEecCcCCCCc----C---HHHHHHHHHhcC--CCeEEEcCCchHH
Confidence 57999997643 333333321 25799999999997532 1 122334444432 3678999999985
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0051 Score=48.12 Aligned_cols=68 Identities=25% Similarity=0.279 Sum_probs=42.5
Q ss_pred EEEEEEcCCCCCCc--------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC
Q 045849 119 SFGLIGDLGQSYDS--------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP 184 (320)
Q Consensus 119 ~f~~~gD~~~~~~~--------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (320)
.+-++||+|.+... ...+..+.+....-|.+-++||++..-+ .-......++.|...
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n-------~~~~a~~IlerLnGr-- 75 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGAN-------RERAAGLILERLNGR-- 75 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccc-------hhhHHHHHHHHcCCc--
Confidence 46778999876421 1234455554434489999999995422 123445555555443
Q ss_pred eEeCCCCCccc
Q 045849 185 WIWTAGNHEID 195 (320)
Q Consensus 185 ~~~~~GNHD~~ 195 (320)
...++||||-.
T Consensus 76 khlv~GNhDk~ 86 (186)
T COG4186 76 KHLVPGNHDKC 86 (186)
T ss_pred EEEeeCCCCCC
Confidence 37899999974
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0052 Score=60.56 Aligned_cols=46 Identities=17% Similarity=0.153 Sum_probs=27.6
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 317 (320)
.+++.+|++.|...-...... ..+. .... +.+ -+||++|.||+|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~--~aen---~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKA--MAEN---SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccc--cccc---hhHH-HhcCCCCCEEEeCCCCcc
Confidence 468889999998764321110 0011 1111 234 38999999999974
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0041 Score=53.57 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=35.7
Q ss_pred HHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 254 KWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 254 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
+-+++.+++++. +++.+||+.|-..-... ........+...+-+.++|+|+.||.|..+
T Consensus 162 ~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q 220 (239)
T cd07381 162 ERIAADIAEAKK-KADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVLQ 220 (239)
T ss_pred HHHHHHHHHHhh-cCCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcCC
Confidence 335555554432 37889999996442111 111223344445556799999999999864
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0072 Score=52.35 Aligned_cols=137 Identities=14% Similarity=0.148 Sum_probs=75.3
Q ss_pred EEEEEcCCCCCCcH-----HHHHHHHh-C---------CCCCceEEEcccccccCCCCCC---------------CChhh
Q 045849 120 FGLIGDLGQSYDSN-----VTLTHYER-N---------PRKGQTLLFVGDLSYADNYPCH---------------DNNRW 169 (320)
Q Consensus 120 f~~~gD~~~~~~~~-----~~l~~~~~-~---------~~~~d~vl~~GD~~~~~~~~~~---------------~~~~~ 169 (320)
+++++|.+.+.... ..+.+++. . ..+...+|++||.+...+.... .....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 68889998765421 22222222 1 1244579999999975432110 02234
Q ss_pred hhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCC---CCCCCCcEEEEEeCcEEEEEEcccC--
Q 045849 170 DTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRA---SGSTAPFWYSIKRASVYIIVLSSYS-- 244 (320)
Q Consensus 170 ~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~---~~~~~~~~ys~~~g~v~fi~lds~~-- 244 (320)
+.+..++..+...+|+...|||||-... .... ...... .+|... .-.....=|.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~-~lPQ----qplh~~-lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANH-SLPQ----QPLHRC-LFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccc-cCCC----CCCCHH-HhhcccccCCcEEeCCCeEEEECCEEEEEECCCCHH
Confidence 5566777888899999999999998522 1111 111000 011100 0001112356889999999977642
Q ss_pred ---CCCCChHHHHHHHHhccc
Q 045849 245 ---AYGKYTPQYKWLEEELPK 262 (320)
Q Consensus 245 ---~~~~~~~q~~WL~~~L~~ 262 (320)
.+...+.-++.|+..|+-
T Consensus 156 Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 156 DILKYSSLESRLDILERTLKW 176 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHh
Confidence 123344556777777754
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00054 Score=58.35 Aligned_cols=64 Identities=22% Similarity=0.171 Sum_probs=39.3
Q ss_pred EEEcCCCCCCcHHHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-cCCeEeCCCCCccc
Q 045849 122 LIGDLGQSYDSNVTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-YQPWIWTAGNHEID 195 (320)
Q Consensus 122 ~~gD~~~~~~~~~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNHD~~ 195 (320)
++||+|... ..+.++++.. .++|.+|++||+++.+. . .......+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~---~~l~~~l~~~~~~~~d~li~lGD~vdrg~----~---~~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCL---DDLLRLLEKIGFPPNDKLIFLGDYVDRGP----D---SVEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCH---HHHHHHHHHhCCCCCCEEEEECCEeCCCC----C---cHHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 689999654 3333333321 37899999999997532 1 1122223333221 45799999999985
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0008 Score=58.92 Aligned_cols=70 Identities=14% Similarity=0.190 Sum_probs=41.3
Q ss_pred EEEEEEcCCCCCCcHHH-HHHHHhCC----CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhcc---CCeEeCCC
Q 045849 119 SFGLIGDLGQSYDSNVT-LTHYERNP----RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAY---QPWIWTAG 190 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~-l~~~~~~~----~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~P~~~~~G 190 (320)
++.++||+|........ ++.+.... ...+.+|++||+++.+. +. ....+++..+... ..++++.|
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGP----dS---~eVld~L~~l~~~~~~~~vv~LrG 75 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGP----ET---RKVIDFLISLPEKHPKQRHVFLCG 75 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCC----CH---HHHHHHHHHhhhcccccceEEEec
Confidence 68999999987543333 33333221 13568999999997642 11 2223333333222 24788999
Q ss_pred CCccc
Q 045849 191 NHEID 195 (320)
Q Consensus 191 NHD~~ 195 (320)
|||..
T Consensus 76 NHE~~ 80 (304)
T cd07421 76 NHDFA 80 (304)
T ss_pred CChHH
Confidence 99964
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00091 Score=58.35 Aligned_cols=67 Identities=28% Similarity=0.290 Sum_probs=40.4
Q ss_pred EEEEEEcCCCCCCcHHH-HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVT-LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
++.++||+|........ ++++.-. .+.|-++++||+++.+.. -.+..+++..+. ..+..+.||||..
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~-~~~D~l~~lGDlVdRGP~-------slevL~~l~~l~--~~~~~VlGNHD~~ 69 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFD-PGQDTLWLTGDLVARGPG-------SLEVLRYVKSLG--DAVRLVLGNHDLH 69 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcC-CCCCEEEEeCCccCCCCC-------HHHHHHHHHhcC--CCeEEEEChhHHH
Confidence 46889999986543333 2333212 256899999999976431 122233343332 2356899999974
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00092 Score=57.29 Aligned_cols=171 Identities=15% Similarity=0.188 Sum_probs=96.8
Q ss_pred CceEEEcccccccCCCCCC---CChhhhhHHHHHh----hhhccCCeEeCCCCCccccCCCCCCcc----cCccccee--
Q 045849 146 GQTLLFVGDLSYADNYPCH---DNNRWDTWGRFVE----RSAAYQPWIWTAGNHEIDFYPEIGETV----PFKPYSHR-- 212 (320)
Q Consensus 146 ~d~vl~~GD~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~P~~~~~GNHD~~~~~~~~~~~----~~~~~~~~-- 212 (320)
|--++..||++.+.+.... +..+...|....+ .+...+|+|.-.||||..-+...-... ....|...
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 3447889999988764332 2233333322222 234569999999999986321100000 00111111
Q ss_pred -----eeCCCCC-CCCCCCcEEEEEeCcEEEEEEcccCCC-CC-ChHHHHHHHHhcccCCCCCCCEEEEEecccc--eec
Q 045849 213 -----YHVPYRA-SGSTAPFWYSIKRASVYIIVLSSYSAY-GK-YTPQYKWLEEELPKVNRSETPWLIVLMHAPW--YNS 282 (320)
Q Consensus 213 -----f~~p~~~-~~~~~~~~ys~~~g~v~fi~lds~~~~-~~-~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~--~~~ 282 (320)
|..|... .......-||+++|+++.+-+-....- .. -.--+-||+.+|........ -++++.|.-. +++
T Consensus 207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgr-pv~LfqhyGwdtfst 285 (392)
T COG5555 207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGR-PVYLFQHYGWDTFST 285 (392)
T ss_pred CcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCC-ceeehhhhCccceec
Confidence 1111110 112234578999999988876553211 11 13346799999976432333 4899999865 443
Q ss_pred CCCCC--------Cc------cHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 283 YNYHY--------ME------GETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 283 ~~~~~--------~~------~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
..++. .. ....|..|...++-|+|...+.||-|..
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~ 334 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDF 334 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEecccccccc
Confidence 33321 00 1235778888899999999999999964
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.012 Score=50.81 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=34.0
Q ss_pred HHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 256 LEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 256 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
+++.+++++ .+++.+||+.|-..-.... .......+..-+-+.++|+|+.||.|..+
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~-----p~~~~~~~A~~l~~~G~DvIiG~H~H~~~ 218 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE-----PTDEQRELAHALIDAGADVVIGHHPHVLQ 218 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC-----CCHHHHHHHHHHHHcCCCEEEcCCCCcCC
Confidence 444444443 2578999999976522111 11122334444445789999999999875
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0033 Score=44.15 Aligned_cols=70 Identities=26% Similarity=0.267 Sum_probs=44.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
+|..+++..- ..+++.|+|...... ..-.|+|....+.. ........ .. ...+.|.+|+|+|.|
T Consensus 2 ~P~~l~v~~~--~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~----~~~~~~~~----~~--~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNI--SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS----DWQEVTVP----GN--ETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEE--CSSEEEEEEEESSSTSSSESEEEEEEEETTSSS----EEEEEEEE----TT--SSEEEEESCCTTSEE
T ss_pred cCcCeEEEEC--CCCEEEEEEECCCCCCCCeeEEEEEEEecccce----eeeeeeee----ee--eeeeeeccCCCCCEE
Confidence 5777777765 358999999998411 23566776654432 01111111 11 226789999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.++|..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0027 Score=53.65 Aligned_cols=74 Identities=19% Similarity=0.186 Sum_probs=46.7
Q ss_pred EEEEEEcCCCCCCc-----------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc
Q 045849 119 SFGLIGDLGQSYDS-----------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA 181 (320)
Q Consensus 119 ~f~~~gD~~~~~~~-----------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
+.++++|.|.+... ...+.++++. .+|+-+|++||+-.+-+.. ....|.....+++.+..
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~--~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKS--LRQEKEEVREFLELLDE 97 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCcc--ccccHHHHHHHHHHhcc
Confidence 67999999987431 1223444555 4999999999998654421 12233333344443333
Q ss_pred cCCeEeCCCCCcccc
Q 045849 182 YQPWIWTAGNHEIDF 196 (320)
Q Consensus 182 ~~P~~~~~GNHD~~~ 196 (320)
. -++.+.||||-..
T Consensus 98 ~-evi~i~GNHD~~i 111 (235)
T COG1407 98 R-EVIIIRGNHDNGI 111 (235)
T ss_pred C-cEEEEeccCCCcc
Confidence 2 5999999999863
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.026 Score=47.69 Aligned_cols=173 Identities=18% Similarity=0.171 Sum_probs=94.4
Q ss_pred eEEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+|++++||+=..... ..-|..+.+.. ++||+|..|-++-.+ ..-.|+.+..+++ ..+- +.+.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky-k~dfvI~N~ENaa~G-----~Git~k~y~~l~~---~G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY-KIDFVIVNGENAAGG-----FGITEKIYKELLE---AGAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhh-cCcEEEEcCccccCC-----cCCCHHHHHHHHH---hCCC-EEecccccc
Confidence 589999999554332 22344555553 899999999998542 2234555555443 3444 458999988
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCCC-CCCCcEEEEEeCcEEEEEEcccCC--CC-CChHHHHHHHHhcccCCCCCCCE
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRASG-STAPFWYSIKRASVYIIVLSSYSA--YG-KYTPQYKWLEEELPKVNRSETPW 270 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~~-~~~~~~ys~~~g~v~fi~lds~~~--~~-~~~~q~~WL~~~L~~~~~~~~~~ 270 (320)
.... ...+..-..++--|.|-+. ..+..|+.|...+..+.+++-... .. ..+.-..=+++.|.+.+ .+.+.
T Consensus 71 d~~e----i~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQKE----ILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cchH----HHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 5211 0011111222333443222 234456777777776666654221 11 12233444556665543 34567
Q ss_pred EEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 271 LIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 271 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
+||-+|.-..+... +| -++-+..|.+|+-=|+|.-
T Consensus 146 iiVDFHAEtTSEK~-----------a~-g~yldGrvsavvGTHTHV~ 180 (266)
T COG1692 146 IIVDFHAETTSEKN-----------AF-GWYLDGRVSAVVGTHTHVP 180 (266)
T ss_pred EEEEccccchhhhh-----------hh-heEEcCeEEEEEeccCccc
Confidence 89999964433211 11 1112446889999999963
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0044 Score=57.78 Aligned_cols=45 Identities=20% Similarity=0.215 Sum_probs=33.7
Q ss_pred CCCeEEEEEEcCCCCCC---------cHHHHHH---HHhCCCCCceEEEcccccccCC
Q 045849 115 DVPYSFGLIGDLGQSYD---------SNVTLTH---YERNPRKGQTLLFVGDLSYADN 160 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~---------~~~~l~~---~~~~~~~~d~vl~~GD~~~~~~ 160 (320)
...+||++..|.|.++. +..++.. +++. .+.||||.+||+.-++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e-~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQE-NDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHh-cCCcEEEecCcccccCC
Confidence 46899999999998753 3445544 3333 49999999999997754
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.004 Score=55.76 Aligned_cols=67 Identities=19% Similarity=0.156 Sum_probs=39.0
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhC---CCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERN---PRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHE 193 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~---~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD 193 (320)
++.++||+|..... +.++.+. +...+-+|++||+++.+.. ..+.+ ..+-.+. ..--++.+.||||
T Consensus 52 ~~~vvGDiHG~~~d---L~~il~~~g~~~~~~~~lFLGDyVDRG~~------s~Evl-~ll~~lk~~~p~~v~llRGNHE 121 (321)
T cd07420 52 QVTICGDLHGKLDD---LFLIFYKNGLPSPENPYVFNGDFVDRGKR------SIEIL-IILFAFFLVYPNEVHLNRGNHE 121 (321)
T ss_pred CeEEEEeCCCCHHH---HHHHHHHcCCCCccceEEEeccccCCCCC------cHHHH-HHHHHHhhcCCCcEEEecCchh
Confidence 57899999976433 3333332 1123679999999976431 11222 1222221 2234888999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 122 ~~ 123 (321)
T cd07420 122 DH 123 (321)
T ss_pred hh
Confidence 85
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.054 Score=46.98 Aligned_cols=61 Identities=15% Similarity=0.195 Sum_probs=40.1
Q ss_pred HHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 252 QYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 252 q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
+.+.+++++++++ .+.+++||+.|--.-... .-....+ .+...+-+.|+|+|+.+|.|..+
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~----~p~~~q~-~~a~~lidaGaDiIiG~HpHv~q 229 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN----YPTPEQR-ELARALIDAGADIIIGHHPHVIQ 229 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC----CCCHHHH-HHHHHHHHcCCCEEEeCCCCccc
Confidence 3477888887765 578899999997421111 1122334 34444445899999999999865
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.015 Score=56.87 Aligned_cols=93 Identities=22% Similarity=0.303 Sum_probs=57.1
Q ss_pred ccCCCCCCCCccEEEE-eeCCCCCcEEEEEEeCCCCCCCeEEEe----ccCCCCceEEEEEEEEEEeccccceEEEEEEe
Q 045849 8 FQVPPGYNAPQQVHIT-QGDLVGKAVIVSWVTVDEPGTNTVVYW----SENSEQKEQAEGKVYTYKYYNYTSGYIHHCTI 82 (320)
Q Consensus 8 ~~~~~~~~~p~~v~l~-~~~~~~~~~~v~W~t~~~~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (320)
..++-+..+|..|-.. ......+|++++|.-++.+......|. ++.... .+. ++. ..-...|+|
T Consensus 434 vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e-~~~----~~~------~t~~~~~ti 502 (996)
T KOG0196|consen 434 VNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDE-RSY----STL------KTKTTTATI 502 (996)
T ss_pred EEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccc-cce----eEE------ecccceEEe
Confidence 3444455666654332 334456899999999876654444443 332110 000 000 112336899
Q ss_pred cCCCCCCEEEEEeCc------CCceeeEEEECCCC
Q 045849 83 RHLEFNTKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 83 ~~L~p~t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
+||+|||.|.++|.. |..|....|.|.+.
T Consensus 503 ~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 503 TGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred eccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 999999999999964 35688899999875
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0075 Score=53.81 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=39.2
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc--cCCeEeCCCCCcc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA--YQPWIWTAGNHEI 194 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~ 194 (320)
+++++||+|..... +.++.+.. ...+-++++||+++.+.. ..+.+ ..+..+.. ..-++.+.||||.
T Consensus 44 ~i~ViGDIHG~~~d---L~~l~~~~g~~~~~~ylFLGDyVDRG~~------s~Evi-~lL~~lki~~p~~v~lLRGNHE~ 113 (305)
T cd07416 44 PVTVCGDIHGQFYD---LLKLFEVGGSPANTRYLFLGDYVDRGYF------SIECV-LYLWALKILYPKTLFLLRGNHEC 113 (305)
T ss_pred CEEEEEeCCCCHHH---HHHHHHhcCCCCCceEEEECCccCCCCC------hHHHH-HHHHHHHhhcCCCEEEEeCCCcH
Confidence 58899999976433 33333221 144789999999975421 11121 22222222 2357889999998
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 114 ~ 114 (305)
T cd07416 114 R 114 (305)
T ss_pred H
Confidence 5
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.014 Score=54.01 Aligned_cols=81 Identities=14% Similarity=0.200 Sum_probs=53.9
Q ss_pred CCCeEEEEEEcCCCCCCcH--HHHHH---HHhC----CCCCceEEEcccccccCCCCCC-C--------ChhhhhHHHHH
Q 045849 115 DVPYSFGLIGDLGQSYDSN--VTLTH---YERN----PRKGQTLLFVGDLSYADNYPCH-D--------NNRWDTWGRFV 176 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~--~~l~~---~~~~----~~~~d~vl~~GD~~~~~~~~~~-~--------~~~~~~~~~~~ 176 (320)
...+++++++|.|.+.... ..+.. ++.- ..+...++++||.++.-+.... + ..+++++.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 4678999999999865321 11222 2221 1245789999999985443221 1 23566677777
Q ss_pred hhhhccCCeEeCCCCCccc
Q 045849 177 ERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 177 ~~~~~~~P~~~~~GNHD~~ 195 (320)
..+...+-++..|||||..
T Consensus 303 ~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred hhCCCCceEEEecCCCCcc
Confidence 7777788899999999985
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.12 Score=44.34 Aligned_cols=169 Identities=17% Similarity=0.138 Sum_probs=78.1
Q ss_pred EEEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccC
Q 045849 121 GLIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFY 197 (320)
Q Consensus 121 ~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~ 197 (320)
+++||.=.... ....|.++.+. .++||||..|.++..+. .-..+.+.++++ ..+- ..+.|||=+...
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~-~~~DfVIaNgENaa~G~-----Git~~~~~~L~~---~GvD-viT~GNH~wdkk 70 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEE-YGIDFVIANGENAAGGF-----GITPKIAEELFK---AGVD-VITMGNHIWDKK 70 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG---G-SEEEEE-TTTTTTS-----S--HHHHHHHHH---HT-S-EEE--TTTTSST
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhh-cCCCEEEECCcccCCCC-----CCCHHHHHHHHh---cCCC-EEecCcccccCc
Confidence 35778743221 12335556666 39999999999985422 112222332222 3444 348999998532
Q ss_pred CCCCCcccCcccceeeeCCCCCCC-CCCCcEEEEEeCcEEEEEEcccCC--CCCChHHHHHHHHhcccCCCCCCCEEEEE
Q 045849 198 PEIGETVPFKPYSHRYHVPYRASG-STAPFWYSIKRASVYIIVLSSYSA--YGKYTPQYKWLEEELPKVNRSETPWLIVL 274 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~f~~p~~~~~-~~~~~~ys~~~g~v~fi~lds~~~--~~~~~~q~~WL~~~L~~~~~~~~~~~iv~ 274 (320)
+...+-.-..+.--|.|-+. ..+..|..++.++..+.+++-... ......-+.-+++.|++. +.+.+.+||=
T Consensus 71 ----ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVD 145 (253)
T PF13277_consen 71 ----EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVD 145 (253)
T ss_dssp ----THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEE
T ss_pred ----HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEE
Confidence 11011111122223444332 234568889999888888775322 111223333344444442 2467789998
Q ss_pred ecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 275 MHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 275 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
+|--..+ .. .-.-.+-.-+|.+|+-=|+|.
T Consensus 146 FHAEaTS-----------EK-~A~g~~lDGrvsaV~GTHTHV 175 (253)
T PF13277_consen 146 FHAEATS-----------EK-QAMGWYLDGRVSAVVGTHTHV 175 (253)
T ss_dssp EE-S-HH-----------HH-HHHHHHHBTTBSEEEEESSSS
T ss_pred eecCcHH-----------HH-HHHHHHhCCcEEEEEeCCCCc
Confidence 9942211 11 222344467899999999996
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0094 Score=54.37 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=38.4
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC--CCC-ceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP--RKG-QTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHE 193 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~--~~~-d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD 193 (320)
++.++||+|..... +..+.+.. ... +.+|++||+++.+.. ..+. ...+..+. ...-++.+.||||
T Consensus 67 ~i~VvGDIHG~~~d---L~~ll~~~g~~~~~~~ylFLGDyVDRGp~------SlEv-l~lL~~lki~~p~~v~lLRGNHE 136 (377)
T cd07418 67 EVVVVGDVHGQLHD---VLFLLEDAGFPDQNRFYVFNGDYVDRGAW------GLET-FLLLLSWKVLLPDRVYLLRGNHE 136 (377)
T ss_pred CEEEEEecCCCHHH---HHHHHHHhCCCCCCceEEEeccccCCCCC------hHHH-HHHHHHHhhccCCeEEEEeeecc
Confidence 58999999976533 33333321 122 458999999965421 1111 22222222 2234889999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 137 ~~ 138 (377)
T cd07418 137 SK 138 (377)
T ss_pred cc
Confidence 85
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.01 Score=52.13 Aligned_cols=68 Identities=15% Similarity=0.187 Sum_probs=39.4
Q ss_pred EEEEEEcCCCCCCcHH-HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh--hccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNV-TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS--AAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD~~ 195 (320)
+++++||+|....... .++.. .. ...+-++++||+++.+.. ..+. ...+..+ .....++.+.||||..
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~-~~-~~~~~~vfLGD~VDrG~~------s~e~-l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLN-GP-PPDTNYVFLGDYVDRGPF------SIEV-ILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHc-CC-CCCceEEEeCCccCCCCC------hHHH-HHHHHHHHhcCCCCEEEEeccccHH
Confidence 5899999997643322 22222 22 256789999999975431 1111 1222222 2233578999999985
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.012 Score=52.06 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=38.7
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 195 (320)
.+.++||+|........+-..... ...+-+|++||+++.+.. ..+. ...+..+. ....++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~-~~~~~~lfLGDyVDRG~~------s~ev-l~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGD-PPDTNYLFLGDYVDRGYY------SVET-FLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCC-CCCCeEEEEeEECCCCcC------HHHH-HHHHHHHhhcCCCcEEEEecccchH
Confidence 478899999754332211111122 244678899999975321 1111 12222222 234589999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.014 Score=51.80 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=38.2
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 195 (320)
.++++||+|........+-..... ...+-+|++||+++.+.. ..+.+ ..+..+. ....++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~-~~~~~~lfLGDyVDRG~~------s~e~i-~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGF-PPESNYLFLGDYVDRGKQ------SLETI-CLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCC-CCcceEEEEeeEecCCCC------cHHHH-HHHHHhhhhCCCcEEEEecccchh
Confidence 478899999754332222111122 244678899999975431 11221 1121221 223478899999985
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.095 Score=49.87 Aligned_cols=55 Identities=18% Similarity=0.292 Sum_probs=36.9
Q ss_pred HHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHH-HHHHHHHhC-CCcE-EEecCcccc
Q 045849 251 PQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRV-MYEPWLVKY-KVDV-VFAGHVHAY 317 (320)
Q Consensus 251 ~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~-~l~~l~~~~-~v~l-vl~GH~H~y 317 (320)
.|.+|-...++. .+.+-+|++.|.|.-.... ++ .+..+...+ ++++ ||-||.|..
T Consensus 212 ~~~~~~~~m~~~---~~idlii~lgH~~~~~~~e---------~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 212 TQSEWEQDMVNT---TDIDLIIALGHSPVRDDDE---------WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred hccchHHHHhhc---cCccEEEEecccccccchh---------hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 467888888777 5677788999988744221 12 333344444 6778 999999964
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.022 Score=50.71 Aligned_cols=67 Identities=16% Similarity=0.219 Sum_probs=37.9
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc--cCCeEeCCCCCcc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA--YQPWIWTAGNHEI 194 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~ 194 (320)
.+.++||+|..... +.++.+.. ...+-+|++||+++.+.. ..+.+ ..+-.+.. ..-++.+.||||.
T Consensus 44 ~i~vvGDIHG~~~~---L~~l~~~~~~~~~~~~lfLGDyVDRG~~------s~evl-~ll~~lk~~~p~~v~llrGNHE~ 113 (303)
T PTZ00239 44 PVNVCGDIHGQFYD---LQALFKEGGDIPNANYIFIGDFVDRGYN------SVETM-EYLLCLKVKYPGNITLLRGNHES 113 (303)
T ss_pred CEEEEEeCCCCHHH---HHHHHHhcCCCCCceEEEeeeEcCCCCC------HHHHH-HHHHHhhhcCCCcEEEEecccch
Confidence 37889999975433 23222211 134678999999976421 11111 12222222 2347899999997
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 114 ~ 114 (303)
T PTZ00239 114 R 114 (303)
T ss_pred H
Confidence 4
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.023 Score=50.95 Aligned_cols=67 Identities=18% Similarity=0.176 Sum_probs=38.2
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh--hccCCeEeCCCCCc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS--AAYQPWIWTAGNHE 193 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD 193 (320)
++.++||+|.... .+.++.+.. ..-|-+|++||+++.+.. ..+.+. .+-.+ ....-++.+.||||
T Consensus 61 ~~~VvGDIHG~~~---dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~------S~Evl~-ll~~lki~~p~~v~lLRGNHE 130 (316)
T cd07417 61 KITVCGDTHGQFY---DLLNIFELNGLPSETNPYLFNGDFVDRGSF------SVEVIL-TLFAFKLLYPNHFHLNRGNHE 130 (316)
T ss_pred eeEEeecccCCHH---HHHHHHHhcCCCCccCeEEEEeeEecCCCC------hHHHHH-HHHHhhhccCCceEEEeeccc
Confidence 6899999997543 333333321 123579999999976431 112221 11122 12334788999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 131 ~~ 132 (316)
T cd07417 131 TD 132 (316)
T ss_pred hH
Confidence 74
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.023 Score=50.82 Aligned_cols=69 Identities=20% Similarity=0.274 Sum_probs=38.2
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc--cCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA--YQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~~ 195 (320)
+++++||+|........+-..... ...+-+|++||+++.+.. ..+.+ ..+..+.. ...++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~-~~~~~ylfLGDyVDRG~~------s~evl-~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGY-PPESNYLFLGDYVDRGKQ------SLETI-CLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCC-CCcceEEEeceecCCCCC------cHHHH-HHHHHhcccCCCceEEEecccchh
Confidence 488899999754332211111122 144678899999975421 11222 12222222 23578999999985
|
|
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.77 Score=39.71 Aligned_cols=70 Identities=20% Similarity=0.165 Sum_probs=41.5
Q ss_pred CCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 115 DVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
....+|+.++|+|...... ... ..-|+++++||...-+ .......|.+.+..+. ..=-+++.||||.
T Consensus 59 ~~~~r~VcisdtH~~~~~i------~~~-p~gDvlihagdfT~~g-----~~~ev~~fn~~~gslp-h~yKIVIaGNHEL 125 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDI------NDI-PDGDVLIHAGDFTNLG-----LPEEVIKFNEWLGSLP-HEYKIVIAGNHEL 125 (305)
T ss_pred CCceEEEEecCcccccCcc------ccC-CCCceEEeccCCcccc-----CHHHHHhhhHHhccCc-ceeeEEEeeccce
Confidence 3578999999998643321 122 3779999999998421 1111223333332221 1124678999999
Q ss_pred ccC
Q 045849 195 DFY 197 (320)
Q Consensus 195 ~~~ 197 (320)
..+
T Consensus 126 tFd 128 (305)
T KOG3947|consen 126 TFD 128 (305)
T ss_pred eec
Confidence 754
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.27 Score=33.97 Aligned_cols=70 Identities=21% Similarity=0.337 Sum_probs=39.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+.+.... .+++.|.|...... ..-.|.|........... .. ...-...+.|.+|.|++.|
T Consensus 3 ~p~~~~~~~~~--~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~~-------~~---~~~~~~~~~i~~l~p~~~Y 70 (93)
T cd00063 3 PPTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEV-------EV---TPGSETSYTLTGLKPGTEY 70 (93)
T ss_pred CCCCcEEEEec--CCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCEEe-------ec---cCCcccEEEEccccCCCEE
Confidence 45445444443 58999999886432 123444443321111111 00 0013456789999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.++|..
T Consensus 71 ~~~v~a 76 (93)
T cd00063 71 EFRVRA 76 (93)
T ss_pred EEEEEE
Confidence 999954
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.065 Score=48.04 Aligned_cols=21 Identities=10% Similarity=0.181 Sum_probs=18.9
Q ss_pred HHHHHHHHHhCCCcEEEecCc
Q 045849 294 RVMYEPWLVKYKVDVVFAGHV 314 (320)
Q Consensus 294 ~~~l~~l~~~~~v~lvl~GH~ 314 (320)
.+++...+++.++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467888999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.035 Score=49.24 Aligned_cols=68 Identities=18% Similarity=0.159 Sum_probs=37.3
Q ss_pred EEEEEcCCCCCCcHH-HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHH-hhhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNV-TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFV-ERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~~~~~GNHD~~ 195 (320)
+.++||+|....... .++.+ .. ...+-+|++||+++.+.. ..+.+.-.+ -.+.....++.+.||||..
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~-~~-~~~~~~lfLGDyVDRG~~------s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKC-GF-PPYSNYLFLGDYVDRGKH------SVETITLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHc-CC-CCcccEEEeeeEecCCCC------HHHHHHHHHHHhhccCCeEEEEecccchH
Confidence 678999997643322 22222 22 134567789999976421 111211111 1122334689999999974
|
|
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.09 Score=53.90 Aligned_cols=79 Identities=22% Similarity=0.300 Sum_probs=47.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCC--C----eEEEeccCCCC---ceEEEEEEEEEEeccccceEEEEEEecCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGT--N----TVVYWSENSEQ---KEQAEGKVYTYKYYNYTSGYIHHCTIRHLE 86 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~--~----~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 86 (320)
.|+.|.|...+ +++++|.|........ . .++|++..... +..+.| ....-.+.+|+
T Consensus 618 PP~Nl~lev~s--StsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~-------------n~~~~l~~~Le 682 (1381)
T KOG4221|consen 618 PPQNLSLEVVS--STSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKG-------------NTTQYLFNGLE 682 (1381)
T ss_pred CCcceEEEecC--CCeEEEEccCCCcccccceEEEEEEEecccCcccccceeeccc-------------chhhhHhhcCC
Confidence 45558777765 7899999999853321 2 33444333211 111111 11123467899
Q ss_pred CCCEEEEEeCc------CCceeeEEEECC
Q 045849 87 FNTKYYYVVGI------GHTERQFWFVTP 109 (320)
Q Consensus 87 p~t~Y~Y~v~~------~~~s~~~~F~t~ 109 (320)
|+|.|.+||.. |..|++.++.|+
T Consensus 683 p~T~Y~vrIsa~t~nGtGpaS~w~~aeT~ 711 (1381)
T KOG4221|consen 683 PNTQYRVRISAMTVNGTGPASEWVSAETP 711 (1381)
T ss_pred CCceEEEEEEEeccCCCCCcccceeccCc
Confidence 99999999954 346778888875
|
|
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.74 Score=30.62 Aligned_cols=71 Identities=23% Similarity=0.286 Sum_probs=39.6
Q ss_pred CccEEEEeeCCCCCcEEEEEEeCCCCC--CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 17 PQQVHITQGDLVGKAVIVSWVTVDEPG--TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 17 p~~v~l~~~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
|..+++.... .+++.|+|....... ...+.|........ ........ ........|.+|+|++.|.++
T Consensus 4 p~~~~~~~~~--~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~i~~L~~~~~Y~v~ 73 (83)
T smart00060 4 PSNLRVTDVT--STSVTLSWEPPPDDGITGYIVGYRVEYREEG--SSWKEVNV------TPSSTSYTLTGLKPGTEYEFR 73 (83)
T ss_pred CCcEEEEEEe--CCEEEEEECCCCCCCCCccEEEEEEEEecCC--CccEEEEe------cCCccEEEEeCcCCCCEEEEE
Confidence 4446666544 348999998543221 24556654432211 00111110 011457889999999999999
Q ss_pred eCc
Q 045849 95 VGI 97 (320)
Q Consensus 95 v~~ 97 (320)
|..
T Consensus 74 v~a 76 (83)
T smart00060 74 VRA 76 (83)
T ss_pred EEE
Confidence 854
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.12 Score=43.34 Aligned_cols=77 Identities=12% Similarity=0.017 Sum_probs=42.0
Q ss_pred EEEEEcCCCCCC--cHHHHHHHHhCC---CCCceEEEcccccccCCCCCC-------CCh---hhhhHHHHHhhhhccCC
Q 045849 120 FGLIGDLGQSYD--SNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCH-------DNN---RWDTWGRFVERSAAYQP 184 (320)
Q Consensus 120 f~~~gD~~~~~~--~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~P 184 (320)
|++++|.+.+.. ....|.++.+.. .+|+.+|++|+.+........ ... ....+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 678999988743 234555555421 379999999999975321100 000 00112233444567889
Q ss_pred eEeCCCCCcccc
Q 045849 185 WIWTAGNHEIDF 196 (320)
Q Consensus 185 ~~~~~GNHD~~~ 196 (320)
++.+||+||...
T Consensus 81 vvlvPg~~D~~~ 92 (209)
T PF04042_consen 81 VVLVPGPNDPTS 92 (209)
T ss_dssp EEEE--TTCTT-
T ss_pred EEEeCCCccccc
Confidence 999999999853
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.52 E-value=3.3 Score=42.71 Aligned_cols=72 Identities=25% Similarity=0.352 Sum_probs=45.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCC----CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVD----EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.+|..+.+...+ ++++.|+|.... ......|+|+...+.. +...... ...-.-.+.|+||+|+|.
T Consensus 821 ~ap~~~~~~~~s--~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~-----~~~~~~~----i~~~~~~~~ltgL~~~T~ 889 (1051)
T KOG3513|consen 821 VAPTKLSAKPLS--SSEVNLSWKPPLWDNGKLTGYEVKYWKINEKE-----GSLSRVQ----IAGNRTSWRLTGLEPNTK 889 (1051)
T ss_pred CCCccceeeccc--CceEEEEecCcCccCCccceeEEEEEEcCCCc-----cccccee----ecCCcceEeeeCCCCCce
Confidence 467777766554 589999995442 2245789999876643 1111000 012233578999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|++.|..
T Consensus 890 Y~~~vrA 896 (1051)
T KOG3513|consen 890 YRFYVRA 896 (1051)
T ss_pred EEEEEEE
Confidence 9999964
|
|
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.40 E-value=1.6 Score=37.22 Aligned_cols=69 Identities=17% Similarity=0.213 Sum_probs=36.9
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHh-hhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVE-RSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~~~GNHD~~ 195 (320)
+.+.||+|......-.+-++-....+ .=-|++||+|+.+- ...+.|.-.+- ++.-.-.+..+.||||..
T Consensus 45 vtvcGDIHGQf~Dllelf~igG~~~~-t~YLFLGDyVDRG~------~SvEt~lLLl~lK~rYP~ritLiRGNHEsR 114 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFRIGGDVPE-TNYLFLGDYVDRGY------YSVETFLLLLALKVRYPDRITLIRGNHESR 114 (303)
T ss_pred cEEeecccchHHHHHHHHHhCCCCCC-CceEeecchhcccc------chHHHHHHHHHHhhcCcceeEEeeccchhh
Confidence 46689999764332222222222212 23568999997632 12344432221 122234477899999985
|
|
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=82.96 E-value=1.6 Score=39.49 Aligned_cols=68 Identities=19% Similarity=0.241 Sum_probs=37.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHh-CCCCCceEEEcccccccCCCCCCCChhhhhH--HHHHhhhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYER-NPRKGQTLLFVGDLSYADNYPCHDNNRWDTW--GRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~-~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
+.++||+|........+-.... .+ .-.-.+++||+++.+... .+.. .-.+ ++.-.--++...||||..
T Consensus 61 V~i~GDiHGq~~DLlrlf~~~g~~p-p~~~ylFLGDYVDRG~~s------lE~i~LL~a~-Ki~yp~~~~lLRGNHE~~ 131 (331)
T KOG0374|consen 61 VKIVGDIHGQFGDLLRLFDLLGSFP-PDQNYVFLGDYVDRGKQS------LETICLLFAL-KIKYPENVFLLRGNHECA 131 (331)
T ss_pred EEEEccCcCCHHHHHHHHHhcCCCC-CcccEEEecccccCCccc------eEEeehhhhh-hhhCCceEEEeccccccc
Confidence 6778999987653222222222 21 223578899999764321 1111 1111 112334589999999986
|
|
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=82.46 E-value=11 Score=39.49 Aligned_cols=96 Identities=20% Similarity=0.165 Sum_probs=52.4
Q ss_pred EEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc----
Q 045849 22 ITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI---- 97 (320)
Q Consensus 22 l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~---- 97 (320)
|....-...++.|.|.....+..+...|..--... -.+.-..+ +.-.++.+|.||+|.|.|.|||..
T Consensus 527 ~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~---~~~~~~~~------~~n~~e~ti~gL~k~TeY~~~vvA~N~~ 597 (1381)
T KOG4221|consen 527 LQAYATSPTTILVTWEPPPFGNGPITGYKLFYSED---DTGKELRV------ENNATEYTINGLEKYTEYSIRVVAYNSA 597 (1381)
T ss_pred ccccccCcceEEEEecCCCCCCCCceEEEEEEEcC---CCCceEEE------ecCccEEEeecCCCccceEEEEEEecCC
Confidence 44444446889999999864444444444311000 00111111 122446779999999999999964
Q ss_pred --CCceeeEEEECCCCCC--CCCCeEEEEEEcC
Q 045849 98 --GHTERQFWFVTPPEVG--PDVPYSFGLIGDL 126 (320)
Q Consensus 98 --~~~s~~~~F~t~p~~~--~~~~~~f~~~gD~ 126 (320)
+..|...+|+|+.... +...++..+.+-.
T Consensus 598 G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~sSt 630 (1381)
T KOG4221|consen 598 GSGVSSADITVRTLSDVPSAPPQNLSLEVVSST 630 (1381)
T ss_pred CCCCCCCceEEEeccCCCCCCCcceEEEecCCC
Confidence 2356677777753211 1134555554443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 320 | ||||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-140 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-140 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-140 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 1e-127 |
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 320 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-122 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-120 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 5e-30 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 7e-18 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 4e-07 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 8e-07 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 2e-06 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 355 bits (913), Expect = e-122
Identities = 240/320 (75%), Positives = 282/320 (88%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGDLVG+A+I+SWVT+DEPG++ V YWSE + +K A
Sbjct: 3 MPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIA 62
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+GK+ TY+++NY+SG+IHH TIR L++NTKYYY VG+ +T R+F F+TPP+ G DVPY+F
Sbjct: 63 KGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTF 122
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TL+HYE +P+KGQT+LFVGDLSYAD YP HDN RWDTWGRF ERS
Sbjct: 123 GLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 182
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEI+F PEI ET PFKP+S+RYHVPY AS ST+PFWYSIKRAS +IIVL
Sbjct: 183 AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVL 242
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYG+ TPQY WL++EL KV RSETPWLIVLMH+P YNSYN+H+MEGE MR +E W
Sbjct: 243 SSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAW 302
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 303 FVKYKVDVVFAGHVHAYERS 322
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 351 bits (902), Expect = e-120
Identities = 223/321 (69%), Positives = 264/321 (82%), Gaps = 1/321 (0%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVT-VDEPGTNTVVYWSENSEQKEQ 59
MP D+DVF VP GYNAPQQVHITQGD G+ VI+SW T D+ G N V YWSENS+ +++
Sbjct: 9 MPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKR 68
Query: 60 AEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYS 119
A G V TYKYYNYTS +IHHCTI+ LE++TKYYY +G G +RQFWFVTPP+ GPDVPY
Sbjct: 69 AMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYV 128
Query: 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS 179
FGLIGD+GQ++DSN TLTHYE+N KGQ +LF+GDLSY++ +P HDNNRWDTWGRF ERS
Sbjct: 129 FGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERS 188
Query: 180 AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIV 239
AYQPWIWTAGNHEID+ P+IGE PF P+++RY P+ ASGS P WY+IKRAS +IIV
Sbjct: 189 VAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIV 248
Query: 240 LSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEP 299
LSSYS + KY+PQYKW EL KVNRSETPWLIVL+HAP YNSY HYMEGE MR ++EP
Sbjct: 249 LSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEP 308
Query: 300 WLVKYKVDVVFAGHVHAYERS 320
+ V YKVD+VF+GHVH+YERS
Sbjct: 309 YFVYYKVDIVFSGHVHSYERS 329
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 115 bits (288), Expect = 5e-30
Identities = 44/234 (18%), Positives = 73/234 (31%), Gaps = 37/234 (15%)
Query: 114 PDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTL---------LFVGDLSYADNYPCH 164
P F +GD G ++ N + T L +GD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62
Query: 165 DNNRWDTW--GRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGS 222
+ R+ F + S PW AGNH+ + + S R++ P
Sbjct: 63 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVS--AQIAYSKISKRWNFPSP--YY 118
Query: 223 TAPFWYSIKRASVYIIVLSSYSAYGKYTP-----------------QYKWLEEELPKVNR 265
F SV I +L + + G Q W++++L
Sbjct: 119 RLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQL---AA 175
Query: 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319
++ +++V H P + S H + P L +KV GH H +
Sbjct: 176 AKEDYVLVAGHYPVW-SIAEHGPTHC-LVKQLLPLLTTHKVTAYLCGHDHNLQY 227
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 81.9 bits (201), Expect = 7e-18
Identities = 33/242 (13%), Positives = 66/242 (27%), Gaps = 42/242 (17%)
Query: 117 PYSFGLIGDLGQSYDSNVTLTHY---ERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWG 173
F +GD G+ + Y + ++ G +D W
Sbjct: 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDP-AWKNLY 61
Query: 174 RFV---ERSAAYQPWIWTAGNHEIDFYPEI-----------------GETVPFKPYSHRY 213
V E+ Y P+ G + E ++
Sbjct: 62 EDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKW 121
Query: 214 HVP---------YRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTP------QYKWLEE 258
+P + S + K + I + ++ + + L+
Sbjct: 122 IMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKS 181
Query: 259 ELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318
+L V + ++IV+ P Y+S + P L +VD+ +GH + E
Sbjct: 182 QL-SVAKKIADFIIVVGDQPIYSSGYSRGSSY--LAYYLLPLLKDAEVDLYISGHDNNME 238
Query: 319 RS 320
Sbjct: 239 VI 240
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 4e-07
Identities = 36/178 (20%), Positives = 56/178 (31%), Gaps = 37/178 (20%)
Query: 149 LLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQ-----PWIWTAGNHEIDFYPEIGET 203
++F GDL+ D + + + +W GNH D E+ +
Sbjct: 70 IVFTGDLA--------DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH--DDRAELRKF 119
Query: 204 VPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSY---SAYGKYTP-QYKWLEEE 259
+ + S AP + IIVL + +G+ Q WL EE
Sbjct: 120 LL------------DEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEE 167
Query: 260 LPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW--LVKYKVDVVFAGHVH 315
L I+ +H P S +R L V + AGH+H
Sbjct: 168 L---ATPAPDGTILALHHPPIPS-VLDMAVTVELRDQAALGRVLRGTDVRAILAGHLH 221
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 8e-07
Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 41/199 (20%)
Query: 149 LLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQ----PWIWTAGNHEI---------- 194
L+ GDL+ +N + ++ + GNH+I
Sbjct: 96 LIISGDLT--------NNGEKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEK 147
Query: 195 DFYPEIGETVPFKPYSHRYHVPYRASGST--APFWYSIKRAS-VYIIVLSS--------- 242
D P Y + S+ Y +S V++++L +
Sbjct: 148 DKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQ 207
Query: 243 --YSAYGKYTP-QYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYE- 298
+ G T W++E ++ LI ++H +N +G T+ +
Sbjct: 208 GNPTTEGGLTAGTLDWIKESSALAKKNGAK-LIPVLHHNLT-DHNDVIQKGYTINYNQQV 265
Query: 299 -PWLVKYKVDVVFAGHVHA 316
L + +D +GH+H
Sbjct: 266 IDALTEGAMDFSLSGHIHT 284
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 2e-06
Identities = 26/175 (14%), Positives = 54/175 (30%), Gaps = 30/175 (17%)
Query: 149 LLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQ-PWIWTAGNHEIDFYPEIGETVPFK 207
++ GD+ + R + + + + P GNH D E +
Sbjct: 45 VVVSGDIV--------NCGRPEEYQVARQILGSLNYPLYLIPGNH--DDKALFLEY--LQ 92
Query: 208 PYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSY---SAYGKYTP-QYKWLEEELPKV 263
P + ++ + ++ + S ++ G T WLE +L +
Sbjct: 93 PL------CPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFE- 145
Query: 264 NRSETPWLIVLMHAPWYNSYNYHYMEGETMR--VMYEPWLVKYK-VDVVFAGHVH 315
+ P I + H P M+ + ++ + +F GH H
Sbjct: 146 -GGDKPATIFMHHPPL--PLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNH 197
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 320 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.96 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.94 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.89 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.88 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.88 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.82 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.61 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.6 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.47 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.41 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.35 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.28 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.27 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.24 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.21 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.17 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.15 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.12 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.11 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.09 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.07 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.99 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.98 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.96 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.95 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.8 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.79 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.65 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.62 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.61 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.6 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.49 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.44 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.29 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.21 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.2 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.18 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.14 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.06 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.97 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.96 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.83 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.76 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 97.76 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.67 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.57 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 97.55 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 97.53 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.52 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 97.5 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.47 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 97.46 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 97.46 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.4 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.4 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.36 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.33 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 97.32 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 97.31 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 97.3 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 97.28 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 97.27 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 97.27 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 97.27 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 97.25 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 97.25 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 97.24 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 97.23 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.21 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.21 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 97.19 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 97.19 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 97.17 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 97.14 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 97.11 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 97.11 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 97.08 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 97.07 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 97.06 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 97.04 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.03 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 97.02 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 97.0 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 97.0 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.97 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.96 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.94 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.91 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 96.88 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.85 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.85 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 96.84 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 96.83 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.83 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.83 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 96.81 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 96.79 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 96.77 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 96.77 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.75 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.74 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 96.73 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 96.7 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 96.68 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 96.67 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.66 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 96.64 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 96.6 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 96.59 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 96.57 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 96.56 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 96.56 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.52 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 96.48 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 96.46 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 96.45 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 96.45 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 96.41 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.41 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 96.39 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 96.38 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 96.35 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.34 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 96.33 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 96.32 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 96.28 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 96.27 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 96.27 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 96.27 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 96.21 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 96.2 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 96.2 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 96.18 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 96.17 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 96.14 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 96.13 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 96.11 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 96.06 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 96.01 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 95.99 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.97 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 95.84 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 95.77 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.7 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.7 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.64 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 95.61 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.53 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 95.49 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.47 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 95.45 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.43 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 95.39 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 95.34 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 95.26 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 95.23 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 95.22 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.19 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 95.15 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 95.12 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 95.04 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 95.04 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 94.93 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.9 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 94.89 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.79 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 94.72 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 94.5 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 94.39 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 94.36 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 94.12 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 93.94 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 93.43 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 93.32 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 92.85 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 92.55 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 92.48 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 92.44 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 92.34 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 92.28 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 92.24 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 92.16 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 91.97 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 91.93 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 91.89 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 91.61 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 91.46 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 91.15 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 90.59 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 90.43 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 90.42 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 90.15 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 90.0 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 89.89 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 89.57 | |
| 3b4n_A | 344 | Endo-pectate lyase; pectin, galacturonic acid, rig | 89.18 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 89.16 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 87.98 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 85.48 | |
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 85.18 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 84.14 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 83.97 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 82.8 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 81.84 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-63 Score=462.84 Aligned_cols=320 Identities=70% Similarity=1.287 Sum_probs=274.4
Q ss_pred CCCCCccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeC-CCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEE
Q 045849 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTV-DEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHH 79 (320)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (320)
||||..+|++|++.++|+||||+++++++++|+|+|.|. +.++.+.|+|++.++.+..++.|+..+|...+...+++|+
T Consensus 9 ~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (426)
T 1xzw_A 9 MPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHH 88 (426)
T ss_dssp CCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEE
T ss_pred CCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEE
Confidence 899999999999999999999999999889999999998 7778899999998877788888888777655556789999
Q ss_pred EEecCCCCCCEEEEEeCcCCceeeEEEECCCCCCCCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccC
Q 045849 80 CTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYAD 159 (320)
Q Consensus 80 ~~l~~L~p~t~Y~Y~v~~~~~s~~~~F~t~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~ 159 (320)
|+|+||+|||+|+|||+.+.+|+.++|+|+|.+++..++||+++||+|.......+++++.+...+|||||++||++|.+
T Consensus 89 v~l~gL~p~t~Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~ 168 (426)
T 1xzw_A 89 CTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSN 168 (426)
T ss_dssp EEECCCCTTCEEEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGG
T ss_pred EEECCCCCCCEEEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcc
Confidence 99999999999999999877899999999998777789999999999976544567777776534899999999999986
Q ss_pred CCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEE
Q 045849 160 NYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIV 239 (320)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~ 239 (320)
+....+..+|+.|.+.++++.+.+|+++++||||+......++...+..|..+|.+|.++.....+.||+|++|+++||+
T Consensus 169 ~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~ 248 (426)
T 1xzw_A 169 RWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIV 248 (426)
T ss_dssp GSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEE
T ss_pred cCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEE
Confidence 64323356799999999998889999999999999743222223345678888889876555567789999999999999
Q ss_pred EcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 240 LSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 240 lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
||++..++.+.+|++||+++|+++++++.+|+||++|+|+++....+..++..+|+.|.++|++++|++||+||+|.|+|
T Consensus 249 Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r 328 (426)
T 1xzw_A 249 LSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYER 328 (426)
T ss_dssp CCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEE
T ss_pred eeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhhee
Confidence 99988777789999999999999766678999999999999876544455677899999999999999999999999998
Q ss_pred C
Q 045849 320 S 320 (320)
Q Consensus 320 t 320 (320)
+
T Consensus 329 ~ 329 (426)
T 1xzw_A 329 S 329 (426)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-63 Score=463.52 Aligned_cols=320 Identities=75% Similarity=1.335 Sum_probs=273.1
Q ss_pred CCCCCccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEE
Q 045849 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHC 80 (320)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (320)
||||.+||++|++.++|+||||++|++++++|+|+|.|.+.++.+.|+|++.++.+..++.|+..+|...+...+++|+|
T Consensus 3 ~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v 82 (424)
T 2qfp_A 3 MPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHT 82 (424)
T ss_dssp CCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEE
T ss_pred CCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEE
Confidence 89999999999999999999999999888999999999877778999999998877788888877766545567899999
Q ss_pred EecCCCCCCEEEEEeCcCCceeeEEEECCCCCCCCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCC
Q 045849 81 TIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADN 160 (320)
Q Consensus 81 ~l~~L~p~t~Y~Y~v~~~~~s~~~~F~t~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~ 160 (320)
+|+||+|||+|+|||+.+++|+.++|+|+|.+++..++||+++||+|.......+++++.+...+|||||++||++|.++
T Consensus 83 ~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~ 162 (424)
T 2qfp_A 83 TIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADR 162 (424)
T ss_dssp EECSCCTTCEEEEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGG
T ss_pred EECCCCCCCEEEEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccc
Confidence 99999999999999999888999999999987777899999999999875545567777665348999999999999876
Q ss_pred CCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEE
Q 045849 161 YPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240 (320)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~l 240 (320)
....+...|+.|.+.++++.+.+|+++++||||+...+..++...+..|..+|.+|..+.....+.||+|++|+++||+|
T Consensus 163 ~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~L 242 (424)
T 2qfp_A 163 YPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVL 242 (424)
T ss_dssp SGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEEC
T ss_pred cccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEe
Confidence 43334567899999999988889999999999996433223333456778888888765445677899999999999999
Q ss_pred cccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 241 ds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
|+...++.+.+|++||+++|+++++++.+|+||++|+|+++....++.++..+|+.|.++|++++|+++|+||+|.|+|+
T Consensus 243 dt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~ 322 (424)
T 2qfp_A 243 SSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERS 322 (424)
T ss_dssp CTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEE
T ss_pred cCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhhee
Confidence 99877777789999999999997666688999999999998765444556778999999999999999999999999984
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=302.66 Aligned_cols=295 Identities=19% Similarity=0.225 Sum_probs=206.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC---------CCCeEEEeccCCC--CceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP---------GTNTVVYWSENSE--QKEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~---------~~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
.|-..-++.|+...+++ |.|...... ....|+|....+. ......|...+. ....++|+|.|+|
T Consensus 7 ~~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~----~~~~~t~~v~v~g 81 (527)
T 2yeq_A 7 YPFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAK----PSLAHSVHVEADG 81 (527)
T ss_dssp CSCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEEC----GGGTTEEEEEECS
T ss_pred CCccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEec----CCCceEEEeecCC
Confidence 45556677776666666 779986320 2346666554443 344555655443 2467899999999
Q ss_pred CCCCCEEEEEeCcCC-ceeeEEEECCCCCCCC-CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCC
Q 045849 85 LEFNTKYYYVVGIGH-TERQFWFVTPPEVGPD-VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYP 162 (320)
Q Consensus 85 L~p~t~Y~Y~v~~~~-~s~~~~F~t~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~ 162 (320)
|+|||+|+||++.++ +|++++|+|+|.++.. .++||+++||.+.......++.++.+. +|||||++||++|+++..
T Consensus 82 L~P~t~Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~--~~D~vlhlGD~iY~d~~~ 159 (527)
T 2yeq_A 82 LEPNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKE--KLDLVFHLGDYIYEYGPN 159 (527)
T ss_dssp CCTTCEEEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTS--CCSEEEECSCSSCCCCTT
T ss_pred cCCCCEEEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhc--CCCEEEecCCcccCCCCC
Confidence 999999999998764 6899999999987653 689999999998754445677777764 999999999999998643
Q ss_pred CC-------------CChhhhhHH---------HHHhhhhccCCeEeCCCCCccccCCCCCCccc------C-----ccc
Q 045849 163 CH-------------DNNRWDTWG---------RFVERSAAYQPWIWTAGNHEIDFYPEIGETVP------F-----KPY 209 (320)
Q Consensus 163 ~~-------------~~~~~~~~~---------~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~------~-----~~~ 209 (320)
.. +...++.|. ..++.+.+.+|+++++||||+..+...+.... | .++
T Consensus 160 ~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~ 239 (527)
T 2yeq_A 160 EYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAY 239 (527)
T ss_dssp SSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHH
T ss_pred cccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHH
Confidence 10 001122221 23456677899999999999974421111100 0 112
Q ss_pred ceee-eCCCCC----CCCCCCcEEEEEeCc-EEEEEEcccCCC----------------------CCChHHHHHHHHhcc
Q 045849 210 SHRY-HVPYRA----SGSTAPFWYSIKRAS-VYIIVLSSYSAY----------------------GKYTPQYKWLEEELP 261 (320)
Q Consensus 210 ~~~f-~~p~~~----~~~~~~~~ys~~~g~-v~fi~lds~~~~----------------------~~~~~q~~WL~~~L~ 261 (320)
..+| .+|... .+.....||+|++|+ ++|++|||...- ..+.+|++||++.|+
T Consensus 240 ~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~ 319 (527)
T 2yeq_A 240 QAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLG 319 (527)
T ss_dssp HHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHh
Confidence 2222 244321 113457899999999 999999995310 136899999999999
Q ss_pred cCCCCCCCEEEEEecccceecCCC----------CCCccHHHHHHHHHHHHhCCCc--EEEecCccccccC
Q 045849 262 KVNRSETPWLIVLMHAPWYNSYNY----------HYMEGETMRVMYEPWLVKYKVD--VVFAGHVHAYERS 320 (320)
Q Consensus 262 ~~~~~~~~~~iv~~H~P~~~~~~~----------~~~~~~~~~~~l~~l~~~~~v~--lvl~GH~H~y~Rt 320 (320)
+ ++++|+||+.|+|++..... .+......|++|.++|.+++|+ +||+||+|.|+++
T Consensus 320 ~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~ 387 (527)
T 2yeq_A 320 S---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWAS 387 (527)
T ss_dssp H---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEE
T ss_pred c---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHh
Confidence 8 67899999999999875321 1223356799999999999984 9999999999873
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=232.89 Aligned_cols=188 Identities=15% Similarity=0.258 Sum_probs=129.4
Q ss_pred CCeEEEEEEcCCCCCCcHHH----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhh-HHHHHhhh--hccCCeEeC
Q 045849 116 VPYSFGLIGDLGQSYDSNVT----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDT-WGRFVERS--AAYQPWIWT 188 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~~~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~P~~~~ 188 (320)
.+++|+++||+|.+...+.. +.++.+. .+|||||++||++|. +....+..+|.. |.+.++.+ ...+|++++
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~v 79 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTV 79 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTTCSEEEEC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhhCCCEEEe
Confidence 47999999999986544333 3334443 499999999999998 543223344543 32333322 357899999
Q ss_pred CCCCccccCCCCC-----------------CcccCcccceeeeCCCCCCCCCCCcEEEE----Ee---------C----c
Q 045849 189 AGNHEIDFYPEIG-----------------ETVPFKPYSHRYHVPYRASGSTAPFWYSI----KR---------A----S 234 (320)
Q Consensus 189 ~GNHD~~~~~~~~-----------------~~~~~~~~~~~f~~p~~~~~~~~~~~ys~----~~---------g----~ 234 (320)
+||||+..+.... +.........+|.+|. .||++ .. | .
T Consensus 80 lGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~ 151 (342)
T 3tgh_A 80 LGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLA 151 (342)
T ss_dssp CCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEE
T ss_pred CCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCce
Confidence 9999986331000 0000122456777763 57764 32 3 4
Q ss_pred EEEEEEcccCCCC----------CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC
Q 045849 235 VYIIVLSSYSAYG----------KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY 304 (320)
Q Consensus 235 v~fi~lds~~~~~----------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~ 304 (320)
++||+|||..... ...+|++||+++|+. ++|+||++|||+|+.... .....+++.|.++|+++
T Consensus 152 v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~~~ 224 (342)
T 3tgh_A 152 AAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLKDA 224 (342)
T ss_dssp EEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHHHT
T ss_pred EEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHHHc
Confidence 8999999964321 125899999999943 479999999999987643 23456789999999999
Q ss_pred CCcEEEecCccccccC
Q 045849 305 KVDVVFAGHVHAYERS 320 (320)
Q Consensus 305 ~v~lvl~GH~H~y~Rt 320 (320)
+|+++|+||+|.|+|+
T Consensus 225 ~VdlvlsGH~H~~~~~ 240 (342)
T 3tgh_A 225 EVDLYISGHDNNMEVI 240 (342)
T ss_dssp TCCEEEECSSSSEEEE
T ss_pred CCCEEEECCCcceeEE
Confidence 9999999999999984
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-27 Score=209.27 Aligned_cols=185 Identities=19% Similarity=0.299 Sum_probs=127.0
Q ss_pred CCeEEEEEEcCCCCCCc----------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh----c
Q 045849 116 VPYSFGLIGDLGQSYDS----------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA----A 181 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~----------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 181 (320)
.++||+++||+|..... ...+.++++. .+|||||++||++|.++....... .|.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~---~~~~~~~~~~~~~~l 80 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDK---RFQETFEDVFSDPSL 80 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCT---HHHHHTTTTSCSGGG
T ss_pred CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchH---HHHHHHHHHcCchhh
Confidence 58999999999986421 1233333333 389999999999987654322222 3334444321 2
Q ss_pred -cCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEe------CcEEEEEEcccCCC--------
Q 045849 182 -YQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKR------ASVYIIVLSSYSAY-------- 246 (320)
Q Consensus 182 -~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~------g~v~fi~lds~~~~-------- 246 (320)
.+|+++++||||...+. .....+.....+|.+| ..||++.+ ++++||+||+....
T Consensus 81 ~~~p~~~v~GNHD~~~~~--~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~ 150 (313)
T 1ute_A 81 RNVPWHVLAGNHDHLGNV--SAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 150 (313)
T ss_dssp TTCCEEECCCHHHHHSCH--HHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred cCCCEEEECCCCccCCCc--cccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccc
Confidence 68999999999985321 0000111222334444 35888887 48999999985310
Q ss_pred ---------CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 247 ---------GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 247 ---------~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
....+|++||++.|++. ..+|+||++|+|+++..... ....+++.|.++|++++|+++|+||+|.+
T Consensus 151 ~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~~--~~~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 151 QQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEHG--PTHCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSSC--CCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred cccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCCC--CcHHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 11378999999999984 35899999999998865422 23456789999999999999999999998
Q ss_pred cc
Q 045849 318 ER 319 (320)
Q Consensus 318 ~R 319 (320)
++
T Consensus 226 ~~ 227 (313)
T 1ute_A 226 QY 227 (313)
T ss_dssp EE
T ss_pred hh
Confidence 76
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-23 Score=184.26 Aligned_cols=182 Identities=21% Similarity=0.189 Sum_probs=124.5
Q ss_pred CCCeEEEEEEcCCCCCC---------cHH----HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc
Q 045849 115 DVPYSFGLIGDLGQSYD---------SNV----TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA 181 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~---------~~~----~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
...+||+++||+|.... ... .++.+.+...++|+||++||+++... ...+..+.+.++.+..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~l~~ 97 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-----PAAYRKLRGLVEPFAA 97 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC-----HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHHHHh
Confidence 46899999999997421 122 33344441138999999999996532 2455666667766633
Q ss_pred --cCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC----CCChHHHHH
Q 045849 182 --YQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY----GKYTPQYKW 255 (320)
Q Consensus 182 --~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~W 255 (320)
.+|+++++||||+.. .+...+.... ......+|++++++++|++||+.... ....+|++|
T Consensus 98 ~~~~pv~~v~GNHD~~~-----------~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~w 163 (330)
T 3ib7_A 98 QLGAELVWVMGNHDDRA-----------ELRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGW 163 (330)
T ss_dssp HHTCEEEECCCTTSCHH-----------HHHHHHHCCC---CCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHH
T ss_pred hcCCCEEEeCCCCCCHH-----------HHHHHhcccc---cccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHH
Confidence 789999999999841 1111111100 11345689999999999999986521 246899999
Q ss_pred HHHhcccCCCCCCCEEEEEecccceecCCCCC-CccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 256 LEEELPKVNRSETPWLIVLMHAPWYNSYNYHY-MEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 256 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
|++.|+... ...+|+++|||++....... ......++.|.+++++++++++|+||+|...
T Consensus 164 l~~~l~~~~---~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~ 224 (330)
T 3ib7_A 164 LAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYST 224 (330)
T ss_dssp HHHHTTSCC---TTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCE
T ss_pred HHHHHHhcc---cCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcc
Confidence 999999853 23378899999876532210 0111235788899999999999999999875
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=181.52 Aligned_cols=187 Identities=18% Similarity=0.186 Sum_probs=121.4
Q ss_pred CCCeEEEEEEcCCCCCCc----------------HHHHH----HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHH
Q 045849 115 DVPYSFGLIGDLGQSYDS----------------NVTLT----HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR 174 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~----------------~~~l~----~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~ 174 (320)
...+||++++|+|..... ...++ .+.+ .+||+||++||+++..... ....++.+..
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~d~vi~~GD~~~~~~~~--~~~~~~~~~~ 78 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNRR--RDASDRALDT 78 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBCTHHHH--TTCHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCCccCCCCCc--chHHHHHHHH
Confidence 357999999999986521 12233 3333 3899999999999753210 0112444444
Q ss_pred HHhhhh-ccCCeEeCCCCCccccCCCCCCcccCcccceeee-------------CCCCCCCCCCCcEEEEEe-CcEEEEE
Q 045849 175 FVERSA-AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYH-------------VPYRASGSTAPFWYSIKR-ASVYIIV 239 (320)
Q Consensus 175 ~~~~~~-~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~-------------~p~~~~~~~~~~~ys~~~-g~v~fi~ 239 (320)
.++.+. ..+|+++++||||...... ..+...+. +|. ....||+|+. ++++||+
T Consensus 79 ~~~~l~~~~~p~~~v~GNHD~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ 146 (322)
T 2nxf_A 79 VMAELDACSVDVHHVWGNHEFYNFSR-------PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVL 146 (322)
T ss_dssp HHHHHHTTCSEEEECCCHHHHHHCCH-------HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEE
T ss_pred HHHHHHhcCCcEEEecCCCCcccCCH-------HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEE
Confidence 444443 2679999999999941100 01111111 221 2346899998 8999999
Q ss_pred EcccCC----------------------------------------------CCCChHHHHHHHHhcccCCCCCCCEEEE
Q 045849 240 LSSYSA----------------------------------------------YGKYTPQYKWLEEELPKVNRSETPWLIV 273 (320)
Q Consensus 240 lds~~~----------------------------------------------~~~~~~q~~WL~~~L~~~~~~~~~~~iv 273 (320)
||+... .....+|++||++.|+++.+ ...++||
T Consensus 147 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv 225 (322)
T 2nxf_A 147 LDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLI 225 (322)
T ss_dssp CCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEE
T ss_pred EcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 998541 01237899999999987531 1346899
Q ss_pred EecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccccc
Q 045849 274 LMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAYER 319 (320)
Q Consensus 274 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R 319 (320)
++|+|++...... ......++.+.++++++ +|+++|+||+|.+.+
T Consensus 226 ~~H~p~~~~~~~~-~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~ 271 (322)
T 2nxf_A 226 FSHLPVHPCAADP-ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGR 271 (322)
T ss_dssp EESSCCCTTSSCG-GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEE
T ss_pred EEccCCCCCCCCc-cccccCHHHHHHHHhcCCCeEEEEcCCcCCCCc
Confidence 9999998755321 00111357889999999 799999999999875
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=176.86 Aligned_cols=181 Identities=13% Similarity=0.123 Sum_probs=119.6
Q ss_pred eEEEEEEcCCCCCC---------cHHHHH----HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC
Q 045849 118 YSFGLIGDLGQSYD---------SNVTLT----HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP 184 (320)
Q Consensus 118 ~~f~~~gD~~~~~~---------~~~~l~----~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (320)
+||++++|+|.... ....++ .+.+...++|+||++||+++... ...++.+.+.++.+ .+|
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~l--~~p 73 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-----PEEYQVARQILGSL--NYP 73 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-----HHHHHHHHHHHTTC--SSC
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHhc--CCC
Confidence 58999999998741 123333 33333236899999999996432 23445555555554 579
Q ss_pred eEeCCCCCccccCCCCCCcccCcccceee-eCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC----CCChHHHHHHHHh
Q 045849 185 WIWTAGNHEIDFYPEIGETVPFKPYSHRY-HVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY----GKYTPQYKWLEEE 259 (320)
Q Consensus 185 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~f-~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL~~~ 259 (320)
+++++||||.... .. ..+...| ..+.+ ....+|+++.++++|++||+.... ....+|++||++.
T Consensus 74 ~~~v~GNHD~~~~--~~-----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~ 142 (274)
T 3d03_A 74 LYLIPGNHDDKAL--FL-----EYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (274)
T ss_dssp EEEECCTTSCHHH--HH-----HHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred EEEECCCCCCHHH--HH-----HHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHH
Confidence 9999999998421 00 0011111 11110 023578899999999999996432 2458999999999
Q ss_pred cccCCCCCCCEEEEEecccceecCCCCC-CccHHHHHHHHHHHHhC-CCcEEEecCcccccc
Q 045849 260 LPKVNRSETPWLIVLMHAPWYNSYNYHY-MEGETMRVMYEPWLVKY-KVDVVFAGHVHAYER 319 (320)
Q Consensus 260 L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R 319 (320)
|++. ..+++|+++|+|++....... ......++.+.++++++ +|+++|+||+|.+..
T Consensus 143 l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~ 201 (274)
T 3d03_A 143 LFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTM 201 (274)
T ss_dssp HHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEE
T ss_pred HHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchh
Confidence 9884 345799999999987542110 01112346788999999 899999999998753
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-20 Score=171.97 Aligned_cols=198 Identities=15% Similarity=0.158 Sum_probs=121.4
Q ss_pred CCCeEEEEEEcCCCCCC-----------------------cHHHHHHHHhC--CCCCceEEEcccccccCCCCCCCChhh
Q 045849 115 DVPYSFGLIGDLGQSYD-----------------------SNVTLTHYERN--PRKGQTLLFVGDLSYADNYPCHDNNRW 169 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~-----------------------~~~~l~~~~~~--~~~~d~vl~~GD~~~~~~~~~~~~~~~ 169 (320)
..++||++++|+|.... ....++++++. ..+||+||++||+++... ...+
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~-----~~~~ 111 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGE-----KTSH 111 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCC-----HHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-----HHHH
Confidence 46899999999997532 12233333221 138999999999996532 1234
Q ss_pred hhHHHHHhhhhc-cCCeEeCCCCCccccCCCCC--Cc-------ccCcccceeeeCCCCC----CCCCCCcEEEEEeCcE
Q 045849 170 DTWGRFVERSAA-YQPWIWTAGNHEIDFYPEIG--ET-------VPFKPYSHRYHVPYRA----SGSTAPFWYSIKRASV 235 (320)
Q Consensus 170 ~~~~~~~~~~~~-~~P~~~~~GNHD~~~~~~~~--~~-------~~~~~~~~~f~~p~~~----~~~~~~~~ys~~~g~v 235 (320)
..+.+.++.+.. .+|+++++||||........ .. .....|...|...... .......|+.+..+++
T Consensus 112 ~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 191 (443)
T 2xmo_A 112 EELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKV 191 (443)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSE
T ss_pred HHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCE
Confidence 555566666533 68999999999985321100 00 0000111111100000 0001233445567899
Q ss_pred EEEEEcccCC------------CCCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCC-CCccHHHHHHHHHHHH
Q 045849 236 YIIVLSSYSA------------YGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYH-YMEGETMRVMYEPWLV 302 (320)
Q Consensus 236 ~fi~lds~~~------------~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-~~~~~~~~~~l~~l~~ 302 (320)
+|++||+... .....+|++||++.|+++.. ....+|+++|+|++...... .......++.+.++++
T Consensus 192 ~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~ 270 (443)
T 2xmo_A 192 WLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALT 270 (443)
T ss_dssp EEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHH
T ss_pred EEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccccccHHHHHHHHH
Confidence 9999999642 12357999999999987532 23468999999998653211 0111223578889999
Q ss_pred hCCCcEEEecCccccc
Q 045849 303 KYKVDVVFAGHVHAYE 318 (320)
Q Consensus 303 ~~~v~lvl~GH~H~y~ 318 (320)
+++|+++|+||+|...
T Consensus 271 ~~~v~lvl~GH~H~~~ 286 (443)
T 2xmo_A 271 EGAMDFSLSGHIHTQN 286 (443)
T ss_dssp HTTCCEEEECSSCSCE
T ss_pred HcCCeEEEECCcccCc
Confidence 9999999999999864
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.3e-15 Score=130.18 Aligned_cols=184 Identities=10% Similarity=0.066 Sum_probs=98.5
Q ss_pred CeEEEEEEcCCCCCCcHHH-HHHHHhCCCCCceEEEcccccccCCCCC-----------CCChh--------hhhHHHHH
Q 045849 117 PYSFGLIGDLGQSYDSNVT-LTHYERNPRKGQTLLFVGDLSYADNYPC-----------HDNNR--------WDTWGRFV 176 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~~~~~~~~-----------~~~~~--------~~~~~~~~ 176 (320)
++||+++||+|.+...... ++.+.+. ++|+||++||+++...... ..... .+.+.+.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~--~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l 82 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEK--QPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF 82 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHH--CCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhc--CCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHH
Confidence 6899999999987544333 3333333 8999999999995421000 00000 02234444
Q ss_pred hhhhc-cCCeEeCCCCCccccCCCCCCcccCcccceeee-CCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC-CCChHHH
Q 045849 177 ERSAA-YQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYH-VPYRASGSTAPFWYSIKRASVYIIVLSSYSAY-GKYTPQY 253 (320)
Q Consensus 177 ~~~~~-~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~-~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-~~~~~q~ 253 (320)
+.+.. ..|+++++||||...... +........ .|.. ....+ ...+.++++.|++++..... ...++++
T Consensus 83 ~~l~~~~~pv~~v~GNHD~~~~~~------~~~~~~~~~~~~~~--~~l~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 153 (260)
T 2yvt_A 83 REIGELGVKTFVVPGKNDAPLKIF------LRAAYEAETAYPNI--RVLHE-GFAGWRGEFEVIGFGGLLTEHEFEEDFV 153 (260)
T ss_dssp HHHHTTCSEEEEECCTTSCCHHHH------HHHHHHTTTTCTTE--EECSS-EEEEETTTEEEEEECSEEESSCCBSSSS
T ss_pred HHHHhcCCcEEEEcCCCCchhhhh------HHHHhhhccCCcce--EEecC-cceEEECCEEEEecCCCcCCCCcCHHHH
Confidence 55543 579999999999842100 000000000 0000 00011 12367789999999853211 1111222
Q ss_pred ---------HHHHHhcccCCCCCCCEEEEEecccceecCCCCC--CccHHHHHHHHHHHHhCCCcEEEecCcc
Q 045849 254 ---------KWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHY--MEGETMRVMYEPWLVKYKVDVVFAGHVH 315 (320)
Q Consensus 254 ---------~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~--~~~~~~~~~l~~l~~~~~v~lvl~GH~H 315 (320)
+|| +.|++. .....|+++|+|++....... .......+.+..++++++++++++||+|
T Consensus 154 ~~~~~~~~~~~l-~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 154 LKYPRWYVEYIL-KFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp CEEEHHHHHHHG-GGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred hhcchhhHHHHH-HHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 455 444443 123469999999875311100 0000112456678888999999999999
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.60 E-value=6.1e-16 Score=130.89 Aligned_cols=170 Identities=8% Similarity=-0.017 Sum_probs=95.5
Q ss_pred CeEEEEEEcCCCCCCcHHHH-HHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 117 PYSFGLIGDLGQSYDSNVTL-THYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l-~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
++||+++||+|.+......+ +.+.+. ++|+||++||+++... ....+..+.+.++. ...|+++++||||..
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~--~~D~vi~~GDl~~~~~----~~~~~~~~~~~l~~--~~~pv~~v~GNHD~~ 76 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDT--GADAIALIGNLMPKAA----KSRDYAAFFRILSE--AHLPTAYVPGPQDAP 76 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHH--TCSEEEEESCSSCTTC----CHHHHHHHHHHHGG--GCSCEEEECCTTSCS
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhc--CCCEEEECCCCCCCCC----CHHHHHHHHHHHHh--cCCcEEEECCCCCch
Confidence 58999999999864322222 222222 7999999999996431 11222233333333 257999999999984
Q ss_pred cCCCCCCcccCcccceee----eCCCCCCCCCCCcEEEEEeC-cEEEEEEcccC--CCCCChH--------HHHHHHHhc
Q 045849 196 FYPEIGETVPFKPYSHRY----HVPYRASGSTAPFWYSIKRA-SVYIIVLSSYS--AYGKYTP--------QYKWLEEEL 260 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~f----~~p~~~~~~~~~~~ys~~~g-~v~fi~lds~~--~~~~~~~--------q~~WL~~~L 260 (320)
.. + .....+ ..|... ...+. .+.++ ++.|++++... .+....+ +..|+++.|
T Consensus 77 ~~----~-----~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 143 (228)
T 1uf3_A 77 IW----E-----YLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKAL 143 (228)
T ss_dssp HH----H-----HHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGG
T ss_pred hH----H-----HHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHH
Confidence 21 0 000110 001000 00111 23445 78999887522 1111122 234445556
Q ss_pred ccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcc
Q 045849 261 PKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVH 315 (320)
Q Consensus 261 ~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 315 (320)
++.. ..+.|+++|+|++...... .. .+.+..++++++++++++||+|
T Consensus 144 ~~~~---~~~~il~~H~p~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 144 WELK---DYPKIFLFHTMPYHKGLNE-QG----SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp GGSC---SCCEEEEESSCBCBTTTBT-TS----BHHHHHHHHHHCCSEEEECCSS
T ss_pred HhCC---CCCeEEEEccCcccCCccc-cC----HHHHHHHHHHhCCCEEEEcccc
Confidence 5532 2358999999997642111 11 1356677888899999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.47 E-value=7.5e-15 Score=131.98 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=96.2
Q ss_pred CCCeEEEEEEcCCCC----CC--c-------HHHHHHHHhCC--CCCceEEEccc-ccccCCCCCCCChhhhhHHHHHhh
Q 045849 115 DVPYSFGLIGDLGQS----YD--S-------NVTLTHYERNP--RKGQTLLFVGD-LSYADNYPCHDNNRWDTWGRFVER 178 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~----~~--~-------~~~l~~~~~~~--~~~d~vl~~GD-~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
...+||++++|+|.+ .. . ...++++++.. .+||+||++|| +++. +.. .......+.+.++.
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~-~~~--~~~~~~~~~~~l~~ 92 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR-NNP--SVVALHDLLDYLKR 92 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCS-SCC--CHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCC-CCC--CHHHHHHHHHHHHH
Confidence 368999999999976 21 1 22333333210 38999999999 6643 211 11223445666666
Q ss_pred hhccCCeEeCCCCCccccCCCCCCcccCccccee----eeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC-------C
Q 045849 179 SAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHR----YHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY-------G 247 (320)
Q Consensus 179 ~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~----f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-------~ 247 (320)
+...+|+++++||||... ... +..+... +.+..+. .....+.+..+++.|++++..... .
T Consensus 93 L~~~~pv~~i~GNHD~~~---~~~---~~~~l~~~g~nv~v~~~~---~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~ 163 (336)
T 2q8u_A 93 MMRTAPVVVLPGNHDWKG---LKL---FGNFVTSISSDITFVMSF---EPVDVEAKRGQKVRILPFPYPDESEALRKNEG 163 (336)
T ss_dssp HHHHSCEEECCC---------CHH---HHHHHHHHCSSEEECCSS---SCEEEECTTSCEEEEEEECCC-------CCSS
T ss_pred HHhcCCEEEECCCCCccc---ccc---HHHHHHhcCCEEEEEecc---cccCceEEeCCCEEEEECCCCCHHHHHHHhhH
Confidence 643489999999999852 110 0111110 1111100 000011122356888888643221 1
Q ss_pred CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHH-HHHHHHHHHhCCCcEEEecCccccc
Q 045849 248 KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETM-RVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 248 ~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~-~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
...+|++|+.+.|...-.....++|+++|.|+........ +. .+ ...+...+.+.++|++++||+|..+
T Consensus 164 ~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~-~~-~~~~~~v~~~l~~~~~d~v~~GH~H~~~ 233 (336)
T 2q8u_A 164 DFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAG-IE-QGREIIINRALIPSVVDYAALGHIHSFR 233 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEESCSSCE
T ss_pred HHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCCC-cc-chhhcccCHHHccccCCEEEEccccCce
Confidence 1246788988777542001345799999999875321100 00 00 0001112335689999999999875
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.5e-13 Score=117.54 Aligned_cols=184 Identities=15% Similarity=0.107 Sum_probs=95.9
Q ss_pred CCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 114 PDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 114 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
....+||+++||+|...... +. .++|+||++||+++.+. ......+.+.++.+. ..++++++||||
T Consensus 56 ~~~~mri~~iSD~H~~~~~l-------~i-~~~D~vi~aGDl~~~g~-----~~e~~~~~~~L~~l~-~~~v~~V~GNHD 121 (296)
T 3rl5_A 56 PAGHTRFVCISDTRSRTDGI-------QM-PYGDILLHTGDFTELGL-----PSEVKKFNDWLGNLP-YEYKIVIAGNHE 121 (296)
T ss_dssp CTTEEEEEEEBCCTTCCTTC-------CC-CSCSEEEECSCCSSSCC-----HHHHHHHHHHHHTSC-CSEEEECCCTTC
T ss_pred CCCCeEEEEEeeCCCCcchh-------cc-CCCCEEEECCcccCCCC-----HHHHHHHHHHHHhCC-CCeEEEEcCCcc
Confidence 34679999999999875321 22 48999999999996431 123344445554432 246899999999
Q ss_pred cccCCCCCCc---ccCcccce----------ee-eCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCC---ChHHHHHH
Q 045849 194 IDFYPEIGET---VPFKPYSH----------RY-HVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGK---YTPQYKWL 256 (320)
Q Consensus 194 ~~~~~~~~~~---~~~~~~~~----------~f-~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~---~~~q~~WL 256 (320)
...+...-+. ..+..+.. .+ .++.+. ....+. +..+++++|++..-...+.. ..++.+++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~L~~~--~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~ 198 (296)
T 3rl5_A 122 LTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNS-IYLQDS--EVTVKGFRIYGAPWTPWFNGWGFNLPRGQSL 198 (296)
T ss_dssp GGGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTS-EECSSE--EEEETTEEEEEECCBCC--CCTTBCCTTHHH
T ss_pred cccchhhhhhhhcccccccccccccccchhhhHhhhcCCe-EEecCC--cEEECCEEEEEecCCCCCCCcCCCcchHHHH
Confidence 9643210000 00000000 00 001000 001111 34567899988543221211 11122233
Q ss_pred HHhcccCCCCCCCEEEEEecccceecCCCCC-CccHHHHHHHHHHH-HhCCCcEEEecCcccc
Q 045849 257 EEELPKVNRSETPWLIVLMHAPWYNSYNYHY-MEGETMRVMYEPWL-VKYKVDVVFAGHVHAY 317 (320)
Q Consensus 257 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~-~~~~v~lvl~GH~H~y 317 (320)
.+.+... .....|+++|.|++....... .....-.+.|...+ ++++++++++||+|..
T Consensus 199 ~~~~~~i---p~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~ 258 (296)
T 3rl5_A 199 LDKWNLI---PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEG 258 (296)
T ss_dssp HHHHTTS---CTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGG
T ss_pred HHHHhhC---CCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCC
Confidence 3333332 123369999999987533110 00001123455555 6899999999999974
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-11 Score=112.70 Aligned_cols=178 Identities=15% Similarity=0.043 Sum_probs=93.8
Q ss_pred CCCeEEEEEEcCCCCCCc----------HHHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc
Q 045849 115 DVPYSFGLIGDLGQSYDS----------NVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA 181 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~----------~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
..++||++++|+|.+... ...+.+++ .. .+||+||++||+++.... ....+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~-~~~D~VliaGDl~d~~~p---~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILE-IKPDVVLHSGDLFNDLRP---PVKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSCSBSSSSC---CHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHH-cCCCEEEECCCCCCCCCC---CHHHHHHHHHHHHHHHh
Confidence 468999999999987421 12233332 22 389999999999864321 11234456666666644
Q ss_pred -cCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCC--ChHHHHHHHH
Q 045849 182 -YQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGK--YTPQYKWLEE 258 (320)
Q Consensus 182 -~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~--~~~q~~WL~~ 258 (320)
.+|+++++||||......... ....+......-. ...++..+-+++.|++++....... ..++++|+..
T Consensus 94 ~~~pv~~v~GNHD~~~~~~~~~--~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~~~~~~~~l~~l~~ 165 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLGEES--PLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFES 165 (386)
T ss_dssp TTCEEEECCCGGGSCSSTTSCC--GGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTTHHHHHHHHHHHHH
T ss_pred cCCcEEEEcCCCCCCccccccC--HHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHHHHHHHHHHHHhhh
Confidence 589999999999853211100 0000100011000 0112211224588888886433211 1123333333
Q ss_pred hcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 259 ELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 259 ~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
.+. ...++|+++|.|+........... +.. + .++|++++||+|...
T Consensus 166 ~~~-----~~~~~Ill~H~~~~~~~~~~~~~~------~~~-l--~~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 166 EAK-----NYKKKILMLHQGINPYIPLDYELE------HFD-L--PKFSYYALGHIHKRI 211 (386)
T ss_dssp HHH-----TCSSEEEEECCCCTTTSSSSCSSC------GGG-S--CCCSEEEECSCCSCE
T ss_pred hcc-----cCCCEEEEECcCccccCCCCcccC------HHH-h--hhCCeEEccCCCCCc
Confidence 322 123589999998854211110000 001 1 139999999999753
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.28 E-value=2.1e-12 Score=111.03 Aligned_cols=171 Identities=5% Similarity=-0.086 Sum_probs=88.6
Q ss_pred eEEEEEEcCCCCCCcH-HHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 118 YSFGLIGDLGQSYDSN-VTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~-~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
+||+++||+|...... ..++.+. ....++|+||++||++..+. . -.+..+.++.+....|+++++||||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~----~---~~~~~~~l~~l~~~~~~~~v~GNhD 74 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFP----Y---PKEVIEVIKDLTKKENVKIIRGKYD 74 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS----C---HHHHHHHHHHHHHHSCEEEECCHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCC----C---HHHHHHHHHhhHhhcCeeEEecchH
Confidence 6899999999753222 2233333 32116899999999995421 1 1233444454443468999999999
Q ss_pred cccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEccc--CCCCCChHHHHHHHHhcccCCCCCCCEE
Q 045849 194 IDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSY--SAYGKYTPQYKWLEEELPKVNRSETPWL 271 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~--~~~~~~~~q~~WL~~~L~~~~~~~~~~~ 271 (320)
.......... ..+.... . ++..... ..+. ..-....+|++||++........-...+
T Consensus 75 ~~~~~~~~~~---~~~~~~~-------~--------~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~ 133 (252)
T 1nnw_A 75 QIIAMSDPHA---TDPGYID-------K--------LELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNE 133 (252)
T ss_dssp HHHHHSCTTC---SSSGGGG-------G--------SSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEE
T ss_pred HHhhcccccc---CCccccc-------c--------hhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcE
Confidence 7521000000 0000000 0 0000000 0000 0001135788999875433211112347
Q ss_pred EEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 272 IVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 272 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
|+++|++++....... ......+.+..++.++ +++++++||+|..
T Consensus 134 i~~~H~~p~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~ 179 (252)
T 1nnw_A 134 VFGVYGSPINPFDGEV-LAEQPTSYYEAIMRPVKDYEMLIVASPMYP 179 (252)
T ss_dssp EEEESSCSSCTTTCCC-CSSCCHHHHHHHHGGGTTSSEEEESTTCSE
T ss_pred EEEEcCCCCCCccccc-CCCCCHHHHHHHHhcCCCCCEEEECCcccc
Confidence 8889988743221110 0111135677788888 9999999999974
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=101.87 Aligned_cols=137 Identities=20% Similarity=0.219 Sum_probs=82.9
Q ss_pred eEEEEEEcCCCCCCcH-------------HH-HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccC
Q 045849 118 YSFGLIGDLGQSYDSN-------------VT-LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQ 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~-------------~~-l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
+||+++||+|.+.... .. ++.+.+...++|+|+++||+++.. .......+.++.+. .
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-------~~~~~~~~~l~~l~--~ 72 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-------NDKNEYLRIWKALP--G 72 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-------CCTTSHHHHHHHSS--S
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-------hhHHHHHHHHHHCC--C
Confidence 6899999999764321 11 222333224899999999999642 11233445555542 4
Q ss_pred CeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccC
Q 045849 184 PWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKV 263 (320)
Q Consensus 184 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~ 263 (320)
|++.++||||.... .+...| .. +. +..| |++.
T Consensus 73 ~~~~v~GNhD~~~~----------~~~~~~-------------------~~-----l~----------~~~~----l~~~ 104 (195)
T 1xm7_A 73 RKILVMGNHDKDKE----------SLKEYF-------------------DE-----IY----------DFYK----IIEH 104 (195)
T ss_dssp EEEEECCTTCCCHH----------HHTTTC-------------------SE-----EE----------SSEE----EEEE
T ss_pred CEEEEeCCCCCchh----------hhhhhh-------------------hc-----hh----------HHHH----HHhc
Confidence 89999999998420 011000 00 00 1111 2211
Q ss_pred CCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 264 NRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 264 ~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
...+|+++|+|++....... ....+.+..++.+++++++++||+|...
T Consensus 105 ----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~ 152 (195)
T 1xm7_A 105 ----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNR 152 (195)
T ss_dssp ----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred ----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCC
Confidence 13589999999876543221 2235788889999999999999999754
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.24 E-value=6.7e-12 Score=114.38 Aligned_cols=188 Identities=16% Similarity=0.145 Sum_probs=98.1
Q ss_pred eEEEEEEcCCCCCC----c---------HHHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc
Q 045849 118 YSFGLIGDLGQSYD----S---------NVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA 181 (320)
Q Consensus 118 ~~f~~~gD~~~~~~----~---------~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
+||++++|+|.+.. . ...+.+++ .. .+||+||++||++++.... ....+..+.+.++.+..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~-~~~D~vliaGDl~hd~~~~--~~~~~~~~~~~l~~l~~ 77 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEK-REVDLILLTGDLLHSRNNP--SVVALHDLLDYLKRMMR 77 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHH-HTCSEEEECSCCBSCSSSC--CHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHh-cCCCEEEECCCccccCCCC--CHHHHHHHHHHHHHHHh
Confidence 68999999998754 1 12333333 22 3899999999999332211 22334556666666644
Q ss_pred cCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEE--eC-cEEEEEEcccCCCC----CChHHHH
Q 045849 182 YQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIK--RA-SVYIIVLSSYSAYG----KYTPQYK 254 (320)
Q Consensus 182 ~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~--~g-~v~fi~lds~~~~~----~~~~q~~ 254 (320)
.+|+++++||||.... ..+..... .++.+........-+.+. .| .+.|+.+.-..... ...++.+
T Consensus 78 ~~~v~~i~GNHD~~~~------~~~~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~ 149 (379)
T 3tho_B 78 TAPVVVLPGNQDWKGL------KLFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 149 (379)
T ss_dssp HSCEEECCCTTSCTTH------HHHHHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHH
T ss_pred CCCEEEEcCCCccccC------cccccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHH
Confidence 4899999999996310 00000000 001000000000112222 23 47777765322111 1246788
Q ss_pred HHHHhcccC---CCCCCCEEEEEecccceecCC-CCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 255 WLEEELPKV---NRSETPWLIVLMHAPWYNSYN-YHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 255 WL~~~L~~~---~~~~~~~~iv~~H~P~~~~~~-~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
|+.+.|++. ......+.|+++|.++..... ... +. .+...+...+...++|++++||.|..+
T Consensus 150 ~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~s-e~-~~~~~v~~~~~~~~~dyvalGH~H~~q 215 (379)
T 3tho_B 150 FLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGI-EQ-GREIIINRALIPSVVDYAALGHIHSFR 215 (379)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSSCE
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCC-cc-ccccccCHHHcCcCCCEEEcccccCCe
Confidence 988887621 012345789999998864322 100 00 000111112224689999999999875
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.21 E-value=4.2e-11 Score=98.68 Aligned_cols=67 Identities=13% Similarity=0.070 Sum_probs=43.2
Q ss_pred CCCCeEEEEEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCC
Q 045849 114 PDVPYSFGLIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAG 190 (320)
Q Consensus 114 ~~~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~G 190 (320)
....+||+++||+|.... ....+.++.+. .++|+||++||++. ....+.++.+ ..|+++++|
T Consensus 7 ~~~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~-~~~d~ii~~GDl~~------------~~~~~~l~~~--~~~~~~v~G 71 (192)
T 1z2w_A 7 TRDRMLVLVLGDLHIPHRCNSLPAKFKKLLVP-GKIQHILCTGNLCT------------KESYDYLKTL--AGDVHIVRG 71 (192)
T ss_dssp ----CEEEEECCCCBTTTCSSCCHHHHTTCCT-TSCSEEEECSCCBS------------HHHHHHHHHH--CSEEEECCC
T ss_pred cccceEEEEEecCCCCccchhHHHHHHHHhcc-CCCCEEEEcCCCCC------------HHHHHHHHhc--CCCEEEEcC
Confidence 345689999999997532 23344444433 37999999999983 1223334433 258999999
Q ss_pred CCccc
Q 045849 191 NHEID 195 (320)
Q Consensus 191 NHD~~ 195 (320)
|||..
T Consensus 72 NhD~~ 76 (192)
T 1z2w_A 72 DFDEN 76 (192)
T ss_dssp TTCCC
T ss_pred CcCcc
Confidence 99984
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=97.97 Aligned_cols=64 Identities=16% Similarity=0.168 Sum_probs=45.4
Q ss_pred CeEEEEEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 117 PYSFGLIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
.+||+++||+|.... ....+.++.+. .++|+||++||++. ....+.++.+ ..|+++++||||
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~-~~~D~vi~~GDl~~------------~~~l~~l~~~--~~~v~~V~GNHD 89 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLAT-DKINYVLCTGNVCS------------QEYVEMLKNI--TKNVYIVSGDLD 89 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHC-TTCCEEEECSCCCC------------HHHHHHHHHH--CSCEEECCCTTC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhc-CCCCEEEECCCCCC------------HHHHHHHHHc--CCCEEEecCCCc
Confidence 589999999998642 23455555544 38999999999983 1223344443 358999999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 90 ~~ 91 (215)
T 2a22_A 90 SA 91 (215)
T ss_dssp CS
T ss_pred Cc
Confidence 85
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=2e-11 Score=104.68 Aligned_cols=152 Identities=16% Similarity=0.206 Sum_probs=86.1
Q ss_pred CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 116 VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
..+|++++||+|.. ...+.++.+...++|.++++||++.... .-....+.+..+. +++++.||||..
T Consensus 2 ~~mri~~isDiHg~---~~~l~~~l~~~~~~d~ii~~GDl~~~g~-------~~~~~~~~l~~~~---~~~~v~GNhD~~ 68 (246)
T 3rqz_A 2 NAMRILIISDVHAN---LVALEAVLSDAGRVDDIWSLGDIVGYGP-------RPRECVELVRVLA---PNISVIGNHDWA 68 (246)
T ss_dssp CCCCEEEECCCTTC---HHHHHHHHHHHCSCSEEEECSCCSSSSS-------CHHHHHHHHHHHC---SSEECCCHHHHH
T ss_pred CCcEEEEEeecCCC---HHHHHHHHHhccCCCEEEECCCcCCCCC-------CHHHHHHHHHhcC---CCEEEeCchHHH
Confidence 35899999999954 3344444332228999999999995421 1123333444332 368999999985
Q ss_pred cCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEe
Q 045849 196 FYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLM 275 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~ 275 (320)
...... . ..+. + ..... +. ........++++||++...... .. .|+++
T Consensus 69 ~~~~~~-------~-~~~~-~------~~~~~------------~~-~~~~~l~~~~~~~L~~lp~~~~--~~--~i~~~ 116 (246)
T 3rqz_A 69 CIGRLS-------L-DEFN-P------VARFA------------SY-WTTMQLQAEHLQYLESLPNRMI--DG--DWTVV 116 (246)
T ss_dssp HTCCCC-------C-C--C-G------GGGCH------------HH-HHHHHCCHHHHHHHHHCCSEEE--ET--TEEEE
T ss_pred HhccCC-------c-cccC-H------HHHHH------------HH-HHHHHcCHHHHHHHHhCCcEEE--EC--CEEEE
Confidence 321000 0 0000 0 00000 00 0001234788999997654432 11 47888
Q ss_pred cccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 276 HAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 276 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
|.++..... ..... ...+..+|++++++++|+||+|.
T Consensus 117 Hg~p~~~~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~ 153 (246)
T 3rqz_A 117 HGSPRHPIW-EYIYN---ARIAALNFPAFDTPLCFVGHTHV 153 (246)
T ss_dssp SSCSSSTTT-CCCCS---HHHHHHHGGGCCSSEEECCSSSS
T ss_pred ECCcCCccc-cccCC---hHHHHHHHhccCCCEEEECCcCc
Confidence 987765321 11111 24567788899999999999996
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.12 E-value=8e-10 Score=89.63 Aligned_cols=111 Identities=12% Similarity=0.071 Sum_probs=70.4
Q ss_pred CeEEEEEEcCCCCCCcHHHHHHHHhCC-CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 117 PYSFGLIGDLGQSYDSNVTLTHYERNP-RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l~~~~~~~-~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
.+|++++||+|.. ...++++++.. .++|+|+++||+.+. .++.+.. |+++++||||..
T Consensus 6 ~m~i~~isD~H~~---~~~~~~~~~~~~~~~d~i~~~GD~~~~----------------~l~~l~~--~~~~v~GNhD~~ 64 (176)
T 3ck2_A 6 KQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELR----------------PDSPLWE--GIRVVKGNMDFY 64 (176)
T ss_dssp CEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSC----------------TTCGGGT--TEEECCCTTCCS
T ss_pred CcEEEEEecCCCC---HHHHHHHHHHhhcCCCEEEECCCCchH----------------HHHhhhC--CeEEecCcccch
Confidence 5899999999953 33344433321 179999999997421 1122222 899999999974
Q ss_pred cCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEe
Q 045849 196 FYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLM 275 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~ 275 (320)
. .+|. . . .+.- ...+|+++
T Consensus 65 ~-----------------~~p~---------~--------~----------------------~~~~-----~~~~i~~~ 83 (176)
T 3ck2_A 65 A-----------------GYPE---------R--------L----------------------VTEL-----GSTKIIQT 83 (176)
T ss_dssp T-----------------TCCS---------E--------E----------------------EEEE-----TTEEEEEE
T ss_pred h-----------------cCCc---------E--------E----------------------EEEE-----CCeEEEEE
Confidence 1 0120 0 0 0010 12478999
Q ss_pred cccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 276 HAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 276 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
|.|++.... . .+.+..++++++++++++||+|..
T Consensus 84 Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~ 117 (176)
T 3ck2_A 84 HGHLFDINF----N----FQKLDYWAQEEEAAICLYGHLHVP 117 (176)
T ss_dssp CSGGGTTTT----C----SHHHHHHHHHTTCSEEECCSSCCE
T ss_pred CCCccCCCC----C----HHHHHHHHHhcCCCEEEECCcCCC
Confidence 998875321 1 134667778899999999999975
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2.3e-10 Score=94.04 Aligned_cols=63 Identities=16% Similarity=0.181 Sum_probs=41.6
Q ss_pred CeEEEEEEcCCCCCCcH-HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 117 PYSFGLIGDLGQSYDSN-VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
.+||+++||+|...... +.++.+.+. ++|+||++||++.. ...+.++.+ ..|+++++||||..
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~--~~D~ii~~GDl~~~------------~~~~~l~~l--~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVSL------------FVIKEFENL--NANIIATYGNNDGE 88 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCST------------HHHHHGGGC--SSEEEEECCTTCCC
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhc--CCCEEEECCCCCCH------------HHHHHHHhc--CCCEEEEeCCCcch
Confidence 38999999999532211 223333333 89999999999831 123333332 47999999999985
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2e-10 Score=102.86 Aligned_cols=74 Identities=15% Similarity=0.203 Sum_probs=50.0
Q ss_pred eEEEEEEcCCCCCCc----------HHHHHHHHh---CCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-cC
Q 045849 118 YSFGLIGDLGQSYDS----------NVTLTHYER---NPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-YQ 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~----------~~~l~~~~~---~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 183 (320)
+||++++|+|.+... ...++++++ . .+||+||++||+++.... .......+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~vl~~GDl~d~~~~---~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQ-ENVDFILIAGDLFHSSRP---SPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEESCSBSSSSC---CHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHh-cCCCEEEECCCcCCCCCC---CHHHHHHHHHHHHHHHHCCC
Confidence 589999999987532 122332222 2 389999999999864321 11234555666666643 68
Q ss_pred CeEeCCCCCccc
Q 045849 184 PWIWTAGNHEID 195 (320)
Q Consensus 184 P~~~~~GNHD~~ 195 (320)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999985
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=4.7e-11 Score=103.68 Aligned_cols=166 Identities=10% Similarity=0.080 Sum_probs=88.2
Q ss_pred CCCeEEEEEEcCCCCCCcH-HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 115 DVPYSFGLIGDLGQSYDSN-VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
..+.||+++||+|...... ..++.+.+. ++|.|+++||++..+. ...+..+.++.+ .|++++.||||
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~--~~D~ii~~GDlv~~g~-------~~~~~~~~l~~~---~~~~~v~GNhD 76 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQL--GVDEYWLLGDILMPGT-------GRRRILDLLDQL---PITARVLGNWE 76 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHT--TCCEEEECSCCSSSSS-------CSHHHHHHHHTS---CEEEECCCHHH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCC-------CHHHHHHHHHcc---CCEEEEcCChH
Confidence 3578999999999653222 223334333 8999999999996432 113334444332 47899999999
Q ss_pred cccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEE
Q 045849 194 IDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIV 273 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv 273 (320)
..... .....+.++. ....+. .. ......-....++++||++........-...+|+
T Consensus 77 ~~~~~---------~~~~~~~~~~-----~~~~~~----~~-----~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~ 133 (270)
T 3qfm_A 77 DSLWH---------GVRKELDSTR-----PSQRYL----LR-----QCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVG 133 (270)
T ss_dssp HHHHH---------HHTTCSCTTS-----HHHHHH----HH-----HHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEE
T ss_pred HHHHH---------hhccccCCCc-----HHHHHH----HH-----HHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEE
Confidence 85210 0000000000 000000 00 0000011335789999987554321111235788
Q ss_pred EecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 274 LMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 274 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
++|..+..... .......-.+.+..++.+.+++++|+||+|.
T Consensus 134 lvHg~p~~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~ 175 (270)
T 3qfm_A 134 ISHHLPDKNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQ 175 (270)
T ss_dssp EESSBTTBSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCS
T ss_pred EEECCCCCCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCc
Confidence 88976643211 1101111234566777788999999999995
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=5.9e-09 Score=95.58 Aligned_cols=78 Identities=17% Similarity=0.182 Sum_probs=51.8
Q ss_pred CCCCeEEEEEEcCCCCCCc---------HHHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh--
Q 045849 114 PDVPYSFGLIGDLGQSYDS---------NVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS-- 179 (320)
Q Consensus 114 ~~~~~~f~~~gD~~~~~~~---------~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~-- 179 (320)
....+||++++|+|.+... ...+++++ .. .+||+||++||+++.... .......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~-~~~D~VliaGDlfd~~~~---~~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQE-NEVDFILLGGDLFHENKP---SRKTLHTCLELLRKYCM 104 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHH-TTCSEEEECSCCBSSSSC---CHHHHHHHHHHHHHHHB
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhh-cCCCEEEEcCccccCCCC---CHHHHHHHHHHHHHHhc
Confidence 3568999999999987431 12333322 22 399999999999865432 123334455555543
Q ss_pred --------------------------------hccCCeEeCCCCCccc
Q 045849 180 --------------------------------AAYQPWIWTAGNHEID 195 (320)
Q Consensus 180 --------------------------------~~~~P~~~~~GNHD~~ 195 (320)
...+|++++.||||..
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2379999999999985
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.98 E-value=5.8e-09 Score=95.21 Aligned_cols=76 Identities=17% Similarity=0.126 Sum_probs=49.2
Q ss_pred CCCeEEEEEEcCCCCCC---------cHHHHHH----HHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhh---
Q 045849 115 DVPYSFGLIGDLGQSYD---------SNVTLTH----YERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER--- 178 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~---------~~~~l~~----~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~--- 178 (320)
...+||++++|+|.+.. ....+++ +.+ .+||+||++||+++.... .......+.+.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~--~~~D~VliaGDLfd~~~p---~~~~~~~~~~~lr~~~~ 85 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARE--RDVDMILLGGDIFHDNKP---SRKALYQALRSLRLNCL 85 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBSSSSC---CHHHHHHHHHHHHHHHB
T ss_pred CCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHh--cCCCEEEEcCccccCCCC---CHHHHHHHHHHHHHhcc
Confidence 46899999999998743 1223333 333 399999999999865432 11222333333333
Q ss_pred ---------h----------------------hccCCeEeCCCCCccc
Q 045849 179 ---------S----------------------AAYQPWIWTAGNHEID 195 (320)
Q Consensus 179 ---------~----------------------~~~~P~~~~~GNHD~~ 195 (320)
| ...+|++++.||||..
T Consensus 86 g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~ 133 (417)
T 4fbw_A 86 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 133 (417)
T ss_dssp SSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-
T ss_pred cCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCc
Confidence 1 1379999999999985
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=3.9e-09 Score=97.13 Aligned_cols=77 Identities=14% Similarity=0.088 Sum_probs=50.2
Q ss_pred CCCCeEEEEEEcCCCCCCc---------HHHHH----HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhh--
Q 045849 114 PDVPYSFGLIGDLGQSYDS---------NVTLT----HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER-- 178 (320)
Q Consensus 114 ~~~~~~f~~~gD~~~~~~~---------~~~l~----~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~-- 178 (320)
....+||++++|+|.+... ...++ .+.+. +||+||++||+++.... .......+.+.++.
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~--~~D~VliaGDLfd~~~p---s~~a~~~~~~~Lr~~~ 147 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER--DVDMILLGGDIFHDNKP---SRKALYQALRSLRLNC 147 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT--TCSEEEECSCSBSSSSC---CHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhc--CCCEEEEcCccccCCCC---CHHHHHHHHHHHHHhc
Confidence 3568999999999987431 12333 33343 99999999999965432 11222333333332
Q ss_pred ----------h----------------------hccCCeEeCCCCCccc
Q 045849 179 ----------S----------------------AAYQPWIWTAGNHEID 195 (320)
Q Consensus 179 ----------~----------------------~~~~P~~~~~GNHD~~ 195 (320)
| ...+|++++.||||..
T Consensus 148 ~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 148 LGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp BSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred ccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 2379999999999985
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.95 E-value=8e-09 Score=83.80 Aligned_cols=63 Identities=14% Similarity=0.035 Sum_probs=42.4
Q ss_pred CCeEEEEEEcCCCCC---CcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCC
Q 045849 116 VPYSFGLIGDLGQSY---DSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNH 192 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~---~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 192 (320)
+.+||+++||+|... .....++++. . ++|+|+++||+++. ...+.++.+ ..|+++++|||
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~--~~D~ii~~GD~~~~------------~~~~~l~~~--~~~v~~V~GNh 83 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-K--EYDGVIGLGDYVDL------------DTVILLEKF--SKEFYGVHGNM 83 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-G--GCSEEEESSCBSCH------------HHHHHHHHH--TSSEEECCCSS
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-c--CCCEEEECCCCCCH------------HHHHHHHhc--CCCEEEEECCC
Confidence 458999999999421 1233444443 2 89999999999831 233334443 26899999999
Q ss_pred ccc
Q 045849 193 EID 195 (320)
Q Consensus 193 D~~ 195 (320)
|..
T Consensus 84 D~~ 86 (178)
T 2kkn_A 84 DYP 86 (178)
T ss_dssp SCG
T ss_pred CcH
Confidence 974
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.80 E-value=8.9e-09 Score=98.27 Aligned_cols=173 Identities=17% Similarity=0.123 Sum_probs=88.8
Q ss_pred CCCeEEEEEEcCCCCCC--------------cHHH----HHHHHhCCCCCc-eEEEcccccccCCCCCCCChhhhhHHHH
Q 045849 115 DVPYSFGLIGDLGQSYD--------------SNVT----LTHYERNPRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRF 175 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~--------------~~~~----l~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~ 175 (320)
...++|++++|+|.... .... ++++.+. .|| ++|.+||++...... .........+.
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~--~~~~l~l~~GD~~~gs~~~--~~~~~~~~~~~ 102 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWAR--AKNPLFLDAGDVFQGTLYF--NQYRGLADRYF 102 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHH--SSSEEEEECSCCSSSSHHH--HHHTTHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhh--CCCEEEEeCCCCCCCcHHH--HHhCCcHHHHH
Confidence 35799999999996421 1122 3444443 577 889999999542100 00011223333
Q ss_pred HhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCC---CC----CC---CCCCCcEEEEEeCc--EEEEEEccc
Q 045849 176 VERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVP---YR----AS---GSTAPFWYSIKRAS--VYIIVLSSY 243 (320)
Q Consensus 176 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p---~~----~~---~~~~~~~ys~~~g~--v~fi~lds~ 243 (320)
+..+ -+-+.++||||+.+... .+..+.+...+| .| .. ......|..++.++ +.|+++.+.
T Consensus 103 ln~l---g~d~~~lGNHEfd~g~~-----~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~ 174 (552)
T 2z1a_A 103 MHRL---RYRAMALGNHEFDLGPG-----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTP 174 (552)
T ss_dssp HHHT---TCCEEECCGGGGTTCHH-----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECT
T ss_pred HHhc---CCCccccccccccCCHH-----HHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEeccc
Confidence 4332 23477899999964210 001111111111 01 00 00123466677776 566666653
Q ss_pred CC---------C--CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEe
Q 045849 244 SA---------Y--GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFA 311 (320)
Q Consensus 244 ~~---------~--~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~ 311 (320)
.. . ....++.+.+.+.|++ .+.+.+|++.|.|.... ..+.++ .+||++|+
T Consensus 175 ~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlg 236 (552)
T 2z1a_A 175 DTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVG 236 (552)
T ss_dssp THHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEE
T ss_pred chhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEe
Confidence 21 0 0111333333344543 34567999999886331 122333 58999999
Q ss_pred cCcccc
Q 045849 312 GHVHAY 317 (320)
Q Consensus 312 GH~H~y 317 (320)
||+|..
T Consensus 237 GHtH~~ 242 (552)
T 2z1a_A 237 GHSHTL 242 (552)
T ss_dssp CSSCCC
T ss_pred CCcCcc
Confidence 999975
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.79 E-value=4.5e-09 Score=99.58 Aligned_cols=187 Identities=16% Similarity=0.113 Sum_probs=91.2
Q ss_pred CCeEEEEEEcCCCCCCc-------H----HHHHHHHhCC--CCC-ceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc
Q 045849 116 VPYSFGLIGDLGQSYDS-------N----VTLTHYERNP--RKG-QTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA 181 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~-------~----~~l~~~~~~~--~~~-d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
..++|++++|+|..... . ..++++.+.. .++ +++|.+||++..... ..........+.+..+.
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~--~~~~~~~~~~~~ln~lg- 83 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE--SDLQDAEPDFRGMNLVG- 83 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHH--HHTTTTHHHHHHHHHHT-
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcch--hhhcCCcHHHHHHhccC-
Confidence 57999999999975321 1 1233333221 135 799999999843210 00011223344455442
Q ss_pred cCCeEeCCCCCccccCCCCCCcccCcccceeeeCCC---CC----CC-CCCCcEEEEEeCc--EEEEEEcccCC--CCC-
Q 045849 182 YQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPY---RA----SG-STAPFWYSIKRAS--VYIIVLSSYSA--YGK- 248 (320)
Q Consensus 182 ~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~---~~----~~-~~~~~~ys~~~g~--v~fi~lds~~~--~~~- 248 (320)
+-+.++||||+..... .+........+|. |- .+ .....|..++.++ +.|+++.+... +..
T Consensus 84 --~d~~~~GNHEfd~g~~-----~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p 156 (516)
T 1hp1_A 84 --YDAMAIGNHEFDNPLT-----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNP 156 (516)
T ss_dssp --CCEEECCGGGGSSCHH-----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSC
T ss_pred --CCEEeeccccccCCHH-----HHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCc
Confidence 3477899999963210 0001111111110 00 00 0112355677776 56677755321 110
Q ss_pred ----------C-hHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 249 ----------Y-TPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 249 ----------~-~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
. +.-.+|+++ |++. .+.+.+|+++|.|........ ........+...+...+||++|+||+|..
T Consensus 157 ~~~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~~--~~~~~~~~la~~~~~~~iDlilgGHtH~~ 231 (516)
T 1hp1_A 157 EYFTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEHG--SNAPGDVEMARALPAGSLAMIVGGHSQDP 231 (516)
T ss_dssp CSCTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCCT--TSCCCHHHHHHHSCTTSSSEEECCSSCCB
T ss_pred CccCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCccc--ccCchHHHHHHhCCCCceeEEECCCCCcc
Confidence 0 112334433 3321 246789999999986532211 00001122333333445999999999974
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.65 E-value=6.9e-08 Score=91.65 Aligned_cols=191 Identities=17% Similarity=0.166 Sum_probs=88.8
Q ss_pred CCCeEEEEEEcCCCCCC-------------cH----HHHHHHHhCCCCCc-eEEEcccccccCCCCC---CCChhhhhHH
Q 045849 115 DVPYSFGLIGDLGQSYD-------------SN----VTLTHYERNPRKGQ-TLLFVGDLSYADNYPC---HDNNRWDTWG 173 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~-------------~~----~~l~~~~~~~~~~d-~vl~~GD~~~~~~~~~---~~~~~~~~~~ 173 (320)
...++|+.++|+|.... .. ..++++.+. .++ ++|.+||++....... ..........
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~--~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQ--YDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLV 94 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTT--SSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhc--CCCEEEEECCCcCCCcHHHHHHhhcccCcchHH
Confidence 36899999999996431 11 223444443 555 7788999995421100 0000012233
Q ss_pred HHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCC-------CCCCCCcEEEEEeCc--EEEEEEcccC
Q 045849 174 RFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRA-------SGSTAPFWYSIKRAS--VYIIVLSSYS 244 (320)
Q Consensus 174 ~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~-------~~~~~~~~ys~~~g~--v~fi~lds~~ 244 (320)
+.+..+ .. -+.++||||+.+... .+..+.....+|.-. .......|..++.++ +-||++.+..
T Consensus 95 ~~ln~l--g~-D~~t~GNHefd~G~~-----~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~ 166 (527)
T 3qfk_A 95 DFYNRM--AF-DFGTLGNHEFNYGLP-----YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQF 166 (527)
T ss_dssp HHHHHT--CC-CEECCCGGGGTTCHH-----HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTT
T ss_pred HHHHhc--CC-cEEeccccccccCHH-----HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCC
Confidence 333332 23 356899999864210 001111111111100 000113366677887 5566665532
Q ss_pred C--CCC--------ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCC-C---ccHHHHHHHHHHHHhCCCcEEE
Q 045849 245 A--YGK--------YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHY-M---EGETMRVMYEPWLVKYKVDVVF 310 (320)
Q Consensus 245 ~--~~~--------~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~---~~~~~~~~l~~l~~~~~v~lvl 310 (320)
. +.. .....+.+++.+++.+ .+++.+|+++|.+.-....... . .++.....+..-+ .-+||++|
T Consensus 167 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~-~~giDlIl 244 (527)
T 3qfk_A 167 IPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAF-SKDIDIFI 244 (527)
T ss_dssp GGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHH-GGGCSEEE
T ss_pred cccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchHHHHHHHhc-CCCCcEEE
Confidence 1 110 1122333444433322 3467799999987643211000 0 0111111222212 24899999
Q ss_pred ecCcccc
Q 045849 311 AGHVHAY 317 (320)
Q Consensus 311 ~GH~H~y 317 (320)
+||+|..
T Consensus 245 gGHtH~~ 251 (527)
T 3qfk_A 245 TGHQHRQ 251 (527)
T ss_dssp CCSSCCE
T ss_pred ECCCCcc
Confidence 9999974
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=6.3e-08 Score=92.82 Aligned_cols=176 Identities=18% Similarity=0.144 Sum_probs=87.3
Q ss_pred CCCeEEEEEEcCCCCCCc------------------HHH----HHHHHhCCCCCc-eEEEcccccccCCCCCCCChhhhh
Q 045849 115 DVPYSFGLIGDLGQSYDS------------------NVT----LTHYERNPRKGQ-TLLFVGDLSYADNYPCHDNNRWDT 171 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~------------------~~~----l~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~ 171 (320)
...++|+.++|+|..... ... ++++.+. .++ ++|.+||++...... .......
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~--~~~~l~l~~GD~~~gs~~~--~~~~g~~ 85 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKK--YKNPLVLHAGDAITGTLYF--TLFGGSA 85 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHH--SSSEEEEECSCCSCSSHHH--HTTTTHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhh--CCCEEEEeCCCCCCCceee--eecCCHH
Confidence 457999999999964221 222 3344443 444 899999999642110 0011222
Q ss_pred HHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCC---C-----CCC--CCCCcEEEEEeCc--EEEEE
Q 045849 172 WGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPY---R-----ASG--STAPFWYSIKRAS--VYIIV 239 (320)
Q Consensus 172 ~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~---~-----~~~--~~~~~~ys~~~g~--v~fi~ 239 (320)
..+.|..+. +-+.++||||+.+... .+..+.+...+|. | +.. .....|..++.++ +-||+
T Consensus 86 ~~~~ln~lg---~D~~tlGNHEfd~G~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG 157 (579)
T 3ztv_A 86 DAAVMNAGN---FHYFTLGNHEFDAGNE-----GLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIG 157 (579)
T ss_dssp HHHHHHHHT---CSEEECCSGGGTTHHH-----HHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEE
T ss_pred HHHHHHhcC---cCeeeccccccccCHH-----HHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEE
Confidence 334444432 3356899999863210 0011111111111 0 000 0112456677777 55677
Q ss_pred Ecc-cC-----CCCC---ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEE
Q 045849 240 LSS-YS-----AYGK---YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVV 309 (320)
Q Consensus 240 lds-~~-----~~~~---~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lv 309 (320)
+.+ .. .... ..+..+-+++.+++.+..+.+.+|+++|.+.... . .+.++ -+||++
T Consensus 158 ~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~d------------~---~la~~~~giDlI 222 (579)
T 3ztv_A 158 LDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEKN------------I---EIAQKVNDIDVI 222 (579)
T ss_dssp EECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHHH------------H---HHHHHCSSCCEE
T ss_pred EEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchhh------------H---HHHHhCCCCCEE
Confidence 743 10 0000 1222333444433322234667999999764220 1 22223 379999
Q ss_pred EecCcccc
Q 045849 310 FAGHVHAY 317 (320)
Q Consensus 310 l~GH~H~y 317 (320)
|+||+|..
T Consensus 223 lgGHtH~~ 230 (579)
T 3ztv_A 223 VTGDSHYL 230 (579)
T ss_dssp EECSSCCE
T ss_pred EeCCCCcc
Confidence 99999975
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=1e-07 Score=90.07 Aligned_cols=186 Identities=13% Similarity=0.089 Sum_probs=87.8
Q ss_pred CCeEEEEEEcCCCCCC---------------cHHH----HHHHHhCCCCCceEEE-cccccccCCCCCCCChhhhhHHHH
Q 045849 116 VPYSFGLIGDLGQSYD---------------SNVT----LTHYERNPRKGQTLLF-VGDLSYADNYPCHDNNRWDTWGRF 175 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~---------------~~~~----l~~~~~~~~~~d~vl~-~GD~~~~~~~~~~~~~~~~~~~~~ 175 (320)
..++|+.++|+|.... .... ++++.+. .++.+++ +||++...... .........+.
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~--~~~~llldaGD~~~g~~~~--~~~~g~~~~~~ 80 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAK--NKATWFFDAGDYFTGPYIS--SLTKGKAIIDI 80 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHH--CSSEEEEECSCCSSSSHHH--HTTTTHHHHHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhc--CCCeEEEECCCCCCCchhh--hhcCChHHHHH
Confidence 4689999999995421 1222 3344443 6776666 99998532100 00111223333
Q ss_pred HhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCC---------CCCCCCCCcEEEEEeCc--EEEEEEcccC
Q 045849 176 VERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPY---------RASGSTAPFWYSIKRAS--VYIIVLSSYS 244 (320)
Q Consensus 176 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~---------~~~~~~~~~~ys~~~g~--v~fi~lds~~ 244 (320)
+.. --+-+.++||||+.+... . +..+.....+|. .+.......|..++.++ +-|+++-+..
T Consensus 81 ln~---lg~D~~tlGNHEfd~G~~--~---l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~ 152 (509)
T 3ive_A 81 MNT---MPFDAVTIGNHEFDHGWD--N---TLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVF 152 (509)
T ss_dssp HTT---SCCSEECCCGGGGTTCHH--H---HHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHH
T ss_pred HHh---cCCcEEeecccccccCHH--H---HHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCc
Confidence 333 224467899999864210 0 000111111111 00000023466677887 5566664310
Q ss_pred -----CC----C--CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCC-C---CccHHHHHHHHHHHHh-CCCcE
Q 045849 245 -----AY----G--KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYH-Y---MEGETMRVMYEPWLVK-YKVDV 308 (320)
Q Consensus 245 -----~~----~--~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-~---~~~~~~~~~l~~l~~~-~~v~l 308 (320)
.. . ...+..+.+++.+++.+.. ++.+|+++|.+.-...... . ....... ..+.++ -+||+
T Consensus 153 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDl 228 (509)
T 3ive_A 153 AFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDI 228 (509)
T ss_dssp HHHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCE
T ss_pred ccccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcE
Confidence 00 0 1122334444444433223 7789999998753211100 0 0001111 223333 37999
Q ss_pred EEecCcccc
Q 045849 309 VFAGHVHAY 317 (320)
Q Consensus 309 vl~GH~H~y 317 (320)
+|+||+|..
T Consensus 229 IlgGHtH~~ 237 (509)
T 3ive_A 229 LITGHAHVG 237 (509)
T ss_dssp EEEESSCCC
T ss_pred EEeCCcCcc
Confidence 999999964
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=1.1e-07 Score=90.48 Aligned_cols=176 Identities=18% Similarity=0.150 Sum_probs=87.9
Q ss_pred CCCeEEEEEEcCCCCCC-----------------cHH----HHHHHHhCCCCC-ceEEEcccccccCCCCCCCChhhhhH
Q 045849 115 DVPYSFGLIGDLGQSYD-----------------SNV----TLTHYERNPRKG-QTLLFVGDLSYADNYPCHDNNRWDTW 172 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~-----------------~~~----~l~~~~~~~~~~-d~vl~~GD~~~~~~~~~~~~~~~~~~ 172 (320)
...++|+.++|+|.... ... .++++.+. .| +++|.+||++...... ........
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~--~~~~l~l~~GD~~~g~~~~--~~~~g~~~ 98 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRA--EPNVLLLDAGDQYQGTIWF--TVYKGAEV 98 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHH--CSSEEEEECSCCSSSSHHH--HHHTTHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhh--CCCEEEEECCccCCCchhh--hhhCChHH
Confidence 35799999999996421 112 23444443 44 6999999999542110 00111223
Q ss_pred HHHHhhhhccCCeEeCCCCCccccCCCCCCcccCc-ccceeeeCCCCCC----CC--------CCCcEEEEEeCcE--EE
Q 045849 173 GRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFK-PYSHRYHVPYRAS----GS--------TAPFWYSIKRASV--YI 237 (320)
Q Consensus 173 ~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~-~~~~~f~~p~~~~----~~--------~~~~~ys~~~g~v--~f 237 (320)
.+.+..+. . -+.++||||+.+... . +. .+.....+|.-.. .. ....|..++.+++ -|
T Consensus 99 ~~~ln~lg--~-d~~~~GNHEfd~g~~--~---l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgi 170 (546)
T 4h2g_A 99 AHFMNALR--Y-DAMALGNHEFDNGVE--G---LIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGI 170 (546)
T ss_dssp HHHHHHHT--C-SEEECCGGGGTTHHH--H---HHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEE
T ss_pred HHHHHhcC--C-cEEeccCcccccCHH--H---HHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEE
Confidence 34444332 2 367899999863210 0 00 1111111111000 00 1234666778875 45
Q ss_pred EEEcccCC--C---C---CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcE
Q 045849 238 IVLSSYSA--Y---G---KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDV 308 (320)
Q Consensus 238 i~lds~~~--~---~---~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~l 308 (320)
+.+.+... + . ...+..+.+++.+++.+..+++.+|+++|.+.... . .+.++ -+||+
T Consensus 171 iG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~d------------~---~la~~~~giDl 235 (546)
T 4h2g_A 171 VGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMD------------K---LIAQKVRGVDV 235 (546)
T ss_dssp EEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH------------H---HHHHHSTTCCE
T ss_pred EEecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccch------------H---HHHHhCCCCcE
Confidence 66654210 0 0 01122333444333321134677999999875321 1 22223 37999
Q ss_pred EEecCcccc
Q 045849 309 VFAGHVHAY 317 (320)
Q Consensus 309 vl~GH~H~y 317 (320)
+|+||+|..
T Consensus 236 IlgGHtH~~ 244 (546)
T 4h2g_A 236 VVGGHSNTF 244 (546)
T ss_dssp EECCSSCCC
T ss_pred EEeCCcCcc
Confidence 999999975
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.49 E-value=4e-07 Score=86.84 Aligned_cols=143 Identities=11% Similarity=0.081 Sum_probs=71.4
Q ss_pred Cc-eEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCC----
Q 045849 146 GQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRAS---- 220 (320)
Q Consensus 146 ~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~---- 220 (320)
|| ++|.+||++...... .........+.++.+ ..+++ + ||||+..... .+..+.+.+.+|.-..
T Consensus 123 pd~Lll~~GD~~~gs~~~--~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~~-----~l~~~l~~~~~p~L~aNv~~ 191 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGLS--LLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGRE-----RVEELLGLFRGEFLSYNIVD 191 (562)
T ss_dssp CCEEEEECSCCSSSSHHH--HHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCHH-----HHHHHHHHCCSEECCSSCEE
T ss_pred CCEEEEeCCCCCCcchhh--hhhCCHHHHHHHHhh--CCcEE-e-cchhcccCHH-----HHHHHHHhCCCCEEEEEEEe
Confidence 78 899999999542100 000112334445443 35655 7 9999864210 0111111111111000
Q ss_pred ----CCCCCcEEEEEeCc--EEEEEEcccC-----------C--CCCChHHHHHHHHhcccCCCCCCCEEEEEeccccee
Q 045849 221 ----GSTAPFWYSIKRAS--VYIIVLSSYS-----------A--YGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYN 281 (320)
Q Consensus 221 ----~~~~~~~ys~~~g~--v~fi~lds~~-----------~--~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 281 (320)
......|..++.++ +.|+++.+.. . +....+..+-+.+.|++ .+.+.+|+++|.|...
T Consensus 192 ~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~~ 268 (562)
T 2wdc_A 192 DLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQL 268 (562)
T ss_dssp TTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHHH
T ss_pred cCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCcc
Confidence 00123455667777 5666665421 0 11112232222233443 3567899999988632
Q ss_pred cCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCcccc
Q 045849 282 SYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAY 317 (320)
Q Consensus 282 ~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 317 (320)
. ..+.++ .+||++|+||+|..
T Consensus 269 d---------------~~la~~~~giDlIlgGHtH~~ 290 (562)
T 2wdc_A 269 D---------------AALAERIRGIDLILSGHTHDL 290 (562)
T ss_dssp H---------------HHHHTTSSSCCEEEECSSCCC
T ss_pred h---------------HHHHhcCCCCcEEEeCCCCCC
Confidence 1 123334 48999999999975
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.44 E-value=2e-06 Score=74.22 Aligned_cols=173 Identities=15% Similarity=0.058 Sum_probs=89.2
Q ss_pred CeEEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 117 PYSFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
.+||+++||.+..... ...+.++.+.. ++|+++..||....+.. ......+.+..+ .+- ..+.||||
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~-~~d~vi~Ngen~~gG~g------~~~~~~~~ln~~--G~D-a~TlGNHe 73 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKY-QADLVIVNAENTTHGKG------LSLKHYEFLKEA--GVN-YITMGNHT 73 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHH-TCSEEEEECTBTTTTSS------CCHHHHHHHHHH--TCC-EEECCTTT
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCCC------cCHHHHHHHHhc--CCC-EEEEccCc
Confidence 5899999999844211 12244444431 57999999999865321 112333334332 233 44779999
Q ss_pred cccCCCCCCcccC-c--ccceeeeCCCCCCCC-CCCcEEEEEeCc--EEEEEEcccCCCC--CChHHHHHHHHhcccCCC
Q 045849 194 IDFYPEIGETVPF-K--PYSHRYHVPYRASGS-TAPFWYSIKRAS--VYIIVLSSYSAYG--KYTPQYKWLEEELPKVNR 265 (320)
Q Consensus 194 ~~~~~~~~~~~~~-~--~~~~~f~~p~~~~~~-~~~~~ys~~~g~--v~fi~lds~~~~~--~~~~q~~WL~~~L~~~~~ 265 (320)
+++.. +...+ . ......++|...... ....|..++.++ +-++.+-+...+. ..+.-.+-+++.+++
T Consensus 74 fD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~~--- 147 (281)
T 1t71_A 74 WFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK--- 147 (281)
T ss_dssp TCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT---
T ss_pred ccCCc---cHHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHhh---
Confidence 97531 11000 0 011111223211000 123466778877 4555554432122 223334456666652
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
.+.+.+||.+|--. ....+.+.. .-.-+||+|+.||+|..
T Consensus 148 ~~~diIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~ 187 (281)
T 1t71_A 148 RDCDLHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVP 187 (281)
T ss_dssp CCCSEEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSC
T ss_pred cCCCEEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcC
Confidence 46788999999411 111112222 12346999999999985
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=3.6e-06 Score=80.08 Aligned_cols=186 Identities=15% Similarity=0.138 Sum_probs=89.8
Q ss_pred CCCeEEEEEEcCCCCCCc-------------HHHH----HHHHhCCCCCc-eEEEcccccccCCCCCCCChhhhhHHHHH
Q 045849 115 DVPYSFGLIGDLGQSYDS-------------NVTL----THYERNPRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFV 176 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~-------------~~~l----~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~ 176 (320)
...++|+.++|+|..... ...+ +++.+. .+++ ++|.+||++.................+.+
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~-~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~l 91 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHS-RNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF 91 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHH-TTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHh-cCCCEEEEecCCCCCCccchhhcccCCHHHHHHH
Confidence 468999999999975210 1222 222212 2677 57999999954221100000122334444
Q ss_pred hhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCC--------C---CCCCcEEEEEe--Cc--EEEEEEc
Q 045849 177 ERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRAS--------G---STAPFWYSIKR--AS--VYIIVLS 241 (320)
Q Consensus 177 ~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~--------~---~~~~~~ys~~~--g~--v~fi~ld 241 (320)
+.+. . =+.++||||+.+... ....+........+|.-.. + .....|..++. ++ +.||++.
T Consensus 92 n~lg--~-Da~tlGNHEfD~G~~--~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt 166 (557)
T 3c9f_A 92 IKQD--Y-DLLTIGNHELYLWEN--SKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFL 166 (557)
T ss_dssp TTSC--C-SEECCCGGGSSSHHH--HHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECC
T ss_pred HhcC--C-CEEeecchhcccchH--HHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEee
Confidence 4432 3 356899999964210 0000111111111121110 0 01123556777 66 5566665
Q ss_pred ccCCCC-----C-ChH---HHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcE-EE
Q 045849 242 SYSAYG-----K-YTP---QYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDV-VF 310 (320)
Q Consensus 242 s~~~~~-----~-~~~---q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~l-vl 310 (320)
+...-. . ... +.+|+++.++ .+++.+|+++|.+..... . ........+.+. -+||+ +|
T Consensus 167 ~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~-----d--~~~~~~~~lA~~~~giDilIl 235 (557)
T 3c9f_A 167 FDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW-----G--EFYQVHQYLRQFFPDTIIQYF 235 (557)
T ss_dssp CCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT-----C--HHHHHHHHHHHHCTTSEEEEE
T ss_pred cCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC-----c--cccHHHHHHHHhCCCCCEEEE
Confidence 432100 0 111 1247766553 357789999998763111 0 111111222333 48994 99
Q ss_pred ecCcccc
Q 045849 311 AGHVHAY 317 (320)
Q Consensus 311 ~GH~H~y 317 (320)
+||.|..
T Consensus 236 gGHtH~~ 242 (557)
T 3c9f_A 236 GGHSHIR 242 (557)
T ss_dssp ECSSCCE
T ss_pred CCCCCCC
Confidence 9999975
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.21 E-value=1.4e-06 Score=72.30 Aligned_cols=74 Identities=15% Similarity=0.098 Sum_probs=45.8
Q ss_pred CeEEEEEEcCCCCCCcHH-HHHHHHhCCCCCceEEEcccccccCCCCCCCChh--hhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 117 PYSFGLIGDLGQSYDSNV-TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNR--WDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
.+||+++||+|....... .++.+.+. ++|+||++||+++..... ..... .....+.++.+. .|+++++||||
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~--~~d~vi~~GDl~~~g~~~-~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD 99 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPRN-ALPEGYAPAKVVERLNEVA--HKVIAVRGNCD 99 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTTS-CCCTTBCHHHHHHHHHTTG--GGEEECCCTTC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhc--CCCEEEECCCccccCccc-ccccccCHHHHHHHHHhcC--CceEEEECCCc
Confidence 489999999997532222 22333333 789999999999643210 01111 133444554432 58999999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 100 ~~ 101 (208)
T 1su1_A 100 SE 101 (208)
T ss_dssp CH
T ss_pred hH
Confidence 85
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.20 E-value=2.2e-05 Score=66.74 Aligned_cols=168 Identities=14% Similarity=0.081 Sum_probs=85.8
Q ss_pred eEEEEEEcCCCCCCcHH----HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 118 YSFGLIGDLGQSYDSNV----TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~----~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
+|++++||.=.. .... .+.++.+. . |++|..|+.+..+... . ....+.+..+ .+-. .+.||||
T Consensus 1 m~ilf~GDv~g~-~G~~~~~~~l~~lr~~--~-d~vi~nge~~~~G~g~---~---~~~~~~l~~~--G~Da-~TlGNHe 67 (255)
T 1t70_A 1 MRVLFIGDVFGQ-PGRRVLQNHLPTIRPQ--F-DFVIVNMENSAGGFGM---H---RDAARGALEA--GAGC-LTLGNHA 67 (255)
T ss_dssp CEEEEECCBBHH-HHHHHHHHHHHHHGGG--C-SEEEEECTBTTTTSSC---C---HHHHHHHHHH--TCSE-EECCTTT
T ss_pred CEEEEEeccCCh-HHHHHHHHHHHHHHhh--C-CEEEECCCCccCCcCC---C---HHHHHHHHhC--CCCE-EEecccc
Confidence 589999998422 1122 23444443 4 9999988887643211 1 2223333332 3343 4679999
Q ss_pred cccCCCCCCcccCcccce-eeeCCCCCC--CCCCCcEEEEEeCc--EEEEEEcccCCCCCChHHHHHHHHhcccCCCCCC
Q 045849 194 IDFYPEIGETVPFKPYSH-RYHVPYRAS--GSTAPFWYSIKRAS--VYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSET 268 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~-~f~~p~~~~--~~~~~~~ys~~~g~--v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~ 268 (320)
++.. +...+-.-.. +.-.|.|-+ ......|..++.++ +.++.|-+.......+.-.+-+++.+++. +.
T Consensus 68 fD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~ 140 (255)
T 1t70_A 68 WHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DL 140 (255)
T ss_dssp TSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SC
T ss_pred ccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CC
Confidence 9742 1111100011 111122211 11234566788876 45555544322222333444566666664 46
Q ss_pred CEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 269 PWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 269 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
+.+||.+|--. ....+.+.. .-.-+||+|+.||+|..
T Consensus 141 d~IIv~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~ 177 (255)
T 1t70_A 141 GTVFVDFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVP 177 (255)
T ss_dssp CEEEEEEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSC
T ss_pred CEEEEEeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcC
Confidence 78999999411 111112222 12346999999999975
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.18 E-value=3.4e-05 Score=65.29 Aligned_cols=168 Identities=13% Similarity=0.140 Sum_probs=85.2
Q ss_pred eEEEEEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+||+++||.=.... ....+.++.+. . |++|..|.....+... .....+.+.. ..+-++ +.||||+
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~--~-d~vi~ngen~~~G~g~------~~~~~~~l~~--~G~D~~-T~GNHef 68 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDR--Y-DLVIANGENAARGKGL------DRRSYRLLRE--AGVDLV-SLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGG--C-SEEEEECTTTTTTSSC------CHHHHHHHHH--HTCCEE-ECCTTTT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhh--C-CEEEEeCCCccCCCCc------CHHHHHHHHh--CCCCEE-EeccEee
Confidence 58999999843221 12234455554 4 8888877776443211 1222333333 334444 7799999
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCCC-CCCCcEEEEEeCcEEEEEEc--ccCCCCCChHHHHHHHHhcccCCCCCCCEE
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRASG-STAPFWYSIKRASVYIIVLS--SYSAYGKYTPQYKWLEEELPKVNRSETPWL 271 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~~-~~~~~~ys~~~g~v~fi~ld--s~~~~~~~~~q~~WL~~~L~~~~~~~~~~~ 271 (320)
+.. +...+-.-.. .-.|.|-+. .....|..++.++.++-+++ ........+.-.+-+++.+++.+ .+.+
T Consensus 69 D~~----~l~~~l~~~~-~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~I 140 (252)
T 2z06_A 69 DHK----EVYALLESEP-VVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYV 140 (252)
T ss_dssp SCT----THHHHHHHSS-EECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEE
T ss_pred ECc----hHHHHhccCC-ceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEE
Confidence 742 1111110011 122222111 11345777888886655544 32211122333334555555542 6789
Q ss_pred EEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 272 IVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 272 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
||.+|--. ....+.+. ..-.-+||+|+.||+|..
T Consensus 141 Iv~~H~g~-----------tsek~~la-~~~dg~Vd~VvGgHTHv~ 174 (252)
T 2z06_A 141 LVEVHAEA-----------TSEKMALA-HYLDGRASAVLGTHTHVP 174 (252)
T ss_dssp EEEEECSC-----------HHHHHHHH-HHHBTTBSEEEEESSCSC
T ss_pred EEEeCCCc-----------HHHHHHHH-HhCCCCeEEEEcCCCCcC
Confidence 99999422 11111222 122346999999999985
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.14 E-value=9.2e-06 Score=72.49 Aligned_cols=47 Identities=19% Similarity=0.188 Sum_probs=27.8
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 317 (320)
.+++.+|+++|...-........++. . ..|.++ -+||++|.||+|..
T Consensus 206 ~g~D~II~l~H~G~~~d~~~~~~e~~--~---~~lA~~v~giD~IigGHsH~~ 253 (341)
T 3gve_A 206 EGADVIIALAHTGIEKQAQSSGAENA--V---FDLATKTKGIDAIISGHQHGL 253 (341)
T ss_dssp TTCSEEEEEECCCCCSSCCCTTCSSC--H---HHHHHHCSCCCEEEECSSCCE
T ss_pred cCCCEEEEEeccCccccccccccchh--H---HHHHhcCCCCcEEEECCCCcc
Confidence 45788999999876432111001111 1 122223 48999999999975
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.06 E-value=8.6e-05 Score=66.10 Aligned_cols=46 Identities=22% Similarity=0.272 Sum_probs=26.9
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 317 (320)
.+++.+|+++|...-........++. .. ++.+ -+||++|.||+|..
T Consensus 200 ~g~D~II~l~H~G~~~d~~~~~~en~--~~----~~~~v~gID~IlgGHsH~~ 246 (339)
T 3jyf_A 200 KGADVVVVVAHSGLSADPYQAMAENS--VY----YLSQVPGVDAIMFGHAHAV 246 (339)
T ss_dssp TTCSEEEEEECCCCCCSCCCTTCSCC--HH----HHTTSTTCCEEEECSSCSE
T ss_pred cCCCEEEEEeccCccccccccccchh--HH----HHhhCCCCCEEEeCCCccc
Confidence 45788999999877321110001111 00 1223 48999999999975
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.97 E-value=8e-05 Score=54.79 Aligned_cols=89 Identities=25% Similarity=0.340 Sum_probs=58.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCC---ceEEEEEEEEEEeccccceEEEEEEecCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQ---KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 87 (320)
..|..+.+.......+++.|+|....... ...|+|....+.. +... ... .....+.|++|+|
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p 78 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIME-----TIS------GDRLTHQIMDLNL 78 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEE-----EEE------TTCCEEEECSCCS
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEE-----EEC------CCceEEEEcCCCC
Confidence 37888888876545689999999864322 3567776643211 1111 100 1123578999999
Q ss_pred CCEEEEEeCc------CCceeeEEEECCCCCCC
Q 045849 88 NTKYYYVVGI------GHTERQFWFVTPPEVGP 114 (320)
Q Consensus 88 ~t~Y~Y~v~~------~~~s~~~~F~t~p~~~~ 114 (320)
+|.|.+||.. +.+|....|+|.+.+.+
T Consensus 79 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 79 DTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp SCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred CCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 9999999964 35788889999876544
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.96 E-value=4.3e-05 Score=72.47 Aligned_cols=172 Identities=16% Similarity=0.118 Sum_probs=84.1
Q ss_pred CeEEEEEEcCCCCCC-----------------cHH----HHHHHHhCCCCC-ceEEEcccccccCCCCCCCChhhhhHHH
Q 045849 117 PYSFGLIGDLGQSYD-----------------SNV----TLTHYERNPRKG-QTLLFVGDLSYADNYPCHDNNRWDTWGR 174 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~-----------------~~~----~l~~~~~~~~~~-d~vl~~GD~~~~~~~~~~~~~~~~~~~~ 174 (320)
.++|+.++|+|.... ... .++++.+. .+ -++|.+||++...... .........+
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~--~~n~llldaGD~~qGs~~~--~~~~g~~~i~ 78 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRA--EPNVLLLDAGDQYQGTIWF--TVYKGAEVAH 78 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHH--CSSEEEEECSCCSCSSHHH--HHHTTHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhh--CcCeEEEEeCCcccchHHH--HHhCChHHHH
Confidence 478999999995321 111 23344443 44 4778899999542110 0001112223
Q ss_pred HHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCC------------CCCCCcEEEEEeCcE--EEEEE
Q 045849 175 FVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRAS------------GSTAPFWYSIKRASV--YIIVL 240 (320)
Q Consensus 175 ~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~------------~~~~~~~ys~~~g~v--~fi~l 240 (320)
.|..+. .=+.++||||+.+.... . ...+.....+|.-.. ...-..|..++.+++ -||++
T Consensus 79 ~mN~lg---yDa~~lGNHEFd~G~~~--l--~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGl 151 (530)
T 4h1s_A 79 FMNALR---YDAMALGNHEFDNGVEG--L--IEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGY 151 (530)
T ss_dssp HHHHTT---CCEEECCGGGGTTTTHH--H--HTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEE
T ss_pred HHhccC---CCEEEEchhhhccCHHH--H--HHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccc
Confidence 333322 22568999999753210 0 000111111121100 011224667788874 56666
Q ss_pred cccC------C-----CCCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcE
Q 045849 241 SSYS------A-----YGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDV 308 (320)
Q Consensus 241 ds~~------~-----~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~l 308 (320)
-+.. . +...-+..+...+.|++ .+++.+|+++|...-. . ..+.++. +||+
T Consensus 152 tt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~~------------d---~~la~~v~giD~ 213 (530)
T 4h1s_A 152 TSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFEM------------D---KLIAQKVRGVDV 213 (530)
T ss_dssp ECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH------------H---HHHHHHSTTCCE
T ss_pred cccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCchH------------H---HHHHhcCCCCCe
Confidence 5421 0 01112222333334444 3567799999964311 1 1233344 8999
Q ss_pred EEecCcccc
Q 045849 309 VFAGHVHAY 317 (320)
Q Consensus 309 vl~GH~H~y 317 (320)
+|.||+|.+
T Consensus 214 IlgGHsH~~ 222 (530)
T 4h1s_A 214 VVGGHSNTF 222 (530)
T ss_dssp EECCSSCCC
T ss_pred eccCCccce
Confidence 999999974
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0002 Score=53.88 Aligned_cols=83 Identities=22% Similarity=0.141 Sum_probs=55.2
Q ss_pred CCCCccEEEEeeCCCCCcEEEEEEeCCCCC--------CCeEEEeccCCC--CceEEEEEEEEEEeccccceEEEEEEec
Q 045849 14 YNAPQQVHITQGDLVGKAVIVSWVTVDEPG--------TNTVVYWSENSE--QKEQAEGKVYTYKYYNYTSGYIHHCTIR 83 (320)
Q Consensus 14 ~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (320)
...|..|++..-. ++++.|+|....... ...|+|...... ....+.+ ....++|+
T Consensus 19 p~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~ 83 (123)
T 2edd_A 19 MLPPVGVQAVALT--HDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTAT 83 (123)
T ss_dssp SCCCEEEEEEEEE--TTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEE
T ss_pred CCCCcceEEEEcC--CCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEec
Confidence 3478887776543 589999999653221 456778765321 1111111 12257899
Q ss_pred CCCCCCEEEEEeCc------CCceeeEEEECCCC
Q 045849 84 HLEFNTKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 84 ~L~p~t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
||+|+|.|.++|.. +.+|....|+|.+.
T Consensus 84 gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 84 GLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 99999999999954 35788889999865
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.76 E-value=1.7e-05 Score=66.28 Aligned_cols=65 Identities=26% Similarity=0.267 Sum_probs=41.6
Q ss_pred CeEEEEEEcCCCCCCcHHHHHHHHh---CCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 117 PYSFGLIGDLGQSYDSNVTLTHYER---NPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l~~~~~---~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
.++++++||+|... ..+.++.+ ...++|.+|++||+++.+. . . .+.++.+. ..+++.+.||||
T Consensus 12 ~~~i~visDiHg~~---~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~----~-~-----~~~~~~l~-~~~~~~v~GNhd 77 (221)
T 1g5b_A 12 YRNIWVVGDLHGCY---TNLMNKLDTIGFDNKKDLLISVGDLVDRGA----E-N-----VECLELIT-FPWFRAVRGNHE 77 (221)
T ss_dssp CSCEEEECCCTTCH---HHHHHHHHHHTCCTTTCEEEECSCCSSSSS----C-H-----HHHHGGGG-STTEEECCCHHH
T ss_pred CceEEEEEcCCCCH---HHHHHHHHHccCCCCCCEEEEeCCccCCCC----C-h-----HHHHHHHh-cCCEEEEccCcH
Confidence 57899999999643 23333222 2126899999999996432 1 1 12222222 358999999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 78 ~~ 79 (221)
T 1g5b_A 78 QM 79 (221)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00022 Score=51.97 Aligned_cols=82 Identities=17% Similarity=0.176 Sum_probs=54.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+.+.......+++.|+|.-..... ...|+|....+..+..... . ...+.|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----------~---~~~~~l~~L~p~t~Y 76 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRA----------A---SNFTEIKNLLVNTLY 76 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEEE----------S---SSEEEECSCCSSCEE
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEecC----------C---ccEEEeCCCCCCCEE
Confidence 7888877764345689999999874322 2456666554433322211 0 115789999999999
Q ss_pred EEEeCc------CCceeeEEEECCC
Q 045849 92 YYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t~p 110 (320)
.+||.. +.+|+...|+|.+
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 77 TVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEECCCceeCCCCCEEEECCC
Confidence 999964 2467788899854
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.67 E-value=3.1e-05 Score=67.12 Aligned_cols=66 Identities=24% Similarity=0.265 Sum_probs=41.3
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
++++++||+|... ..+.++.+.. .++|.+|++||+++.+. . . .+..+.+..+. .+++.+.||||.
T Consensus 1 M~i~vigDiHG~~---~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~----~--s-~~~l~~l~~l~--~~~~~v~GNHe~ 68 (280)
T 2dfj_A 1 MATYLIGDVHGCY---DELIALLHKVEFTPGKDTLWLTGDLVARGP----G--S-LDVLRYVKSLG--DSVRLVLGNHDL 68 (280)
T ss_dssp -CEEEECCCCSCH---HHHHHHHHHTTCCTTTCEEEECSCCSSSSS----C--H-HHHHHHHHHTG--GGEEECCCHHHH
T ss_pred CeEEEEecCCCCH---HHHHHHHHHhCCCCCCCEEEEeCCcCCCCC----c--c-HHHHHHHHhCC--CceEEEECCCcH
Confidence 4789999999653 3333333321 26799999999996532 1 1 12233333332 379999999997
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 69 ~ 69 (280)
T 2dfj_A 69 H 69 (280)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.57 E-value=6e-05 Score=64.72 Aligned_cols=64 Identities=25% Similarity=0.274 Sum_probs=39.8
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCC--CC-CceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNP--RK-GQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~--~~-~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
.|++++||+|... ..+.++++.. .. .|.+|++||+++.+. . . .+..+.+.. .+++++.||||.
T Consensus 19 ~~i~visDiHg~~---~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~----~--~-~~~l~~l~~----~~~~~v~GNHd~ 84 (262)
T 2qjc_A 19 GRVIIVGDIHGCR---AQLEDLLRAVSFKQGSDTLVAVGDLVNKGP----D--S-FGVVRLLKR----LGAYSVLGNHDA 84 (262)
T ss_dssp SCEEEECCCTTCH---HHHHHHHHHHTCCTTTSEEEECSCCSSSSS----C--H-HHHHHHHHH----HTCEECCCHHHH
T ss_pred CeEEEEeCCCCCH---HHHHHHHHHHhccCCCCEEEEecCCCCCCC----C--H-HHHHHHHHH----CCCEEEeCcChH
Confidence 4899999999543 3333332211 14 499999999996432 1 1 122222322 479999999998
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 85 ~ 85 (262)
T 2qjc_A 85 K 85 (262)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00031 Score=51.04 Aligned_cols=82 Identities=20% Similarity=0.173 Sum_probs=51.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
+|..+.+..-. ++++.|+|......+ ...|+|............+ ......|++|+|+|.|
T Consensus 10 ~P~~~~~~~~s--~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~Y 74 (106)
T 1x4x_A 10 QCKPPQVTCRS--ATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATTY 74 (106)
T ss_dssp CCCCCCCEEEE--TTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCEE
T ss_pred CCCCCEEEEcC--CCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCEE
Confidence 56666665433 589999999764322 2456666543221111111 0124678999999999
Q ss_pred EEEeCc------CCceeeEEEECCCCC
Q 045849 92 YYVVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t~p~~ 112 (320)
.+||.. +.+|+...++|.+..
T Consensus 75 ~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 75 YCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred EEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 999964 357788899997653
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00025 Score=52.44 Aligned_cols=84 Identities=14% Similarity=0.081 Sum_probs=53.7
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC--------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG--------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLE 86 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 86 (320)
..|..|++..-. ++++.|+|.-..... ...|+|........... .. ..-...+.|+||+
T Consensus 10 ~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~-----~~------~~~~~~~~i~gL~ 76 (113)
T 1x5j_A 10 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYK-----NA------NATTLSYLVTGLK 76 (113)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCE-----EC------CBCSSEEEEESCC
T ss_pred CCCcceEEEEec--CCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEE-----EE------ecCcCEEEeCCCC
Confidence 478888877643 589999999753221 35667776321111000 00 0112357899999
Q ss_pred CCCEEEEEeCc------CCceeeEEEECCCC
Q 045849 87 FNTKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 87 p~t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|+|.|.++|.. +.+|....++|.+.
T Consensus 77 P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 77 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 99999999964 35788888898765
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00087 Score=49.25 Aligned_cols=86 Identities=13% Similarity=0.182 Sum_probs=53.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCC------CCCCeEEEeccCCC---CceEEEEEEEEEEeccccceEEEEEEecCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDE------PGTNTVVYWSENSE---QKEQAEGKVYTYKYYNYTSGYIHHCTIRHL 85 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 85 (320)
..|..+.+.. ...+++.|+|.-... .....|.|...... ..... . . . .. ...++|++|
T Consensus 10 ~~P~~~~~~~--~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~--~-~--~----~~--~~~~~i~~L 76 (114)
T 1x4y_A 10 AGPYITFTDA--VNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--M-V--E----GD--RYWHSISHL 76 (114)
T ss_dssp SCCEEEEEEC--SSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--E-E--E----TT--CCEEEECSC
T ss_pred CCCeEEEEEe--cCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeE--e-c--C----Cc--EeEEEcCCC
Confidence 3676666554 346899999997641 12356777654432 11100 0 0 0 01 124789999
Q ss_pred CCCCEEEEEeCc------CCceeeEEEECCCCCC
Q 045849 86 EFNTKYYYVVGI------GHTERQFWFVTPPEVG 113 (320)
Q Consensus 86 ~p~t~Y~Y~v~~------~~~s~~~~F~t~p~~~ 113 (320)
+|+|.|.+||.. +.+|+...|+|.+.+.
T Consensus 77 ~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 77 QPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred CCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 999999999954 3578888999976543
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00053 Score=49.81 Aligned_cols=84 Identities=14% Similarity=0.275 Sum_probs=52.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+.+.... .+++.|+|.-..... ...|+|............-. .-...+.|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~l~~L~p~t~Y 76 (108)
T 2djs_A 10 TVPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVY 76 (108)
T ss_dssp CCSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEE
T ss_pred CCcceEEEecC--CCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEEe-----------cCccEEEEcCCCCCCEE
Confidence 57777665433 579999999865432 23556655443221111000 01124679999999999
Q ss_pred EEEeCc------CCceeeEEEECCCCC
Q 045849 92 YYVVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t~p~~ 112 (320)
.+||.. +.+|....|+|.+..
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 77 VVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 999964 246778899997654
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00063 Score=49.54 Aligned_cols=84 Identities=17% Similarity=0.261 Sum_probs=54.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCC--ceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQ--KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+.+. ....+++.|.|...... ....|+|....... .....+ -...+.|++|+|++
T Consensus 13 ~P~~l~~~--~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t 77 (111)
T 1x5l_A 13 QVVVIRQE--RAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKA-------------VTTRATVSGLKPGT 77 (111)
T ss_dssp CCCCEECS--CBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEE-------------SSSEEEECSCCTTC
T ss_pred CCceEEEE--EcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEecC-------------CCCEEEEcCCCCCC
Confidence 46555544 34568999999876432 23466776654221 111111 12257799999999
Q ss_pred EEEEEeCc------CCceeeEEEECCCCCCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPPEVGP 114 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p~~~~ 114 (320)
.|.+||.. +.+|....|+|.+.+++
T Consensus 78 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 78 RYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 99999964 35788899999876543
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00099 Score=49.24 Aligned_cols=86 Identities=23% Similarity=0.295 Sum_probs=54.3
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCC-CC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVD-EP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~-~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
..|..+.+... ..++++|.|.... .. ....|+|........... . . ...-...+.|++|+|+|
T Consensus 19 ~~P~~l~~~~~--~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~-----~-~----~~~~~~~~~i~~L~p~t 86 (120)
T 1x5f_A 19 SAPRDVVASLV--STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE-----N-T----SHPGEMQVTIQNLMPAT 86 (120)
T ss_dssp CCCEEEEEEEE--CSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEE-----E-C----SSTTCSEEEECSCCTTC
T ss_pred CCCCCcEEEec--CCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEE-----E-e----ccCCccEEEeCCCCCCC
Confidence 36777777654 3579999999764 22 235677766543222111 0 0 00113357899999999
Q ss_pred EEEEEeCc------CCceeeEEEECCCCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p~~ 112 (320)
.|.+||.. +.+|+...|+|.+..
T Consensus 87 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 115 (120)
T 1x5f_A 87 VYIFRVMAQNKHGSGESSAPLRVETQPES 115 (120)
T ss_dssp EEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEeCCCC
Confidence 99999964 245778889997543
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00062 Score=50.02 Aligned_cols=82 Identities=16% Similarity=0.244 Sum_probs=54.0
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+++.... .+++.|+|...... ....|+|..........+... ...+.|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~ 83 (116)
T 1x5g_A 19 GPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTE 83 (116)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCE
T ss_pred cCCCccEEEecC--CCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEecC-------------CceEEEcCCCCCCE
Confidence 377888876543 57999999876322 235677766543322221111 12577999999999
Q ss_pred EEEEeCc------CCceeeEEEECCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|.+||.. +.+|....|+|.+.
T Consensus 84 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 84 YSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 9999954 34677788898754
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00029 Score=50.64 Aligned_cols=80 Identities=26% Similarity=0.244 Sum_probs=49.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCC--CC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVD--EP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~--~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+.+ .....+++.|+|.... .. ....|+|............+ -.....|++|+|+|
T Consensus 11 ~P~~l~~--~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t 75 (103)
T 2edy_A 11 FPQNLHV--TGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKPDT 75 (103)
T ss_dssp CCEEEEC--SSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCTTC
T ss_pred CCeeeEE--EecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCCCC
Confidence 5655554 4445689999999872 11 23456676554322111111 01236799999999
Q ss_pred EEEEEeCc------CCceeeEEEECCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
.|.++|.. +.+|+...|+|.|
T Consensus 76 ~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 76 TYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 99999964 2466667777754
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00019 Score=62.91 Aligned_cols=70 Identities=16% Similarity=0.147 Sum_probs=41.4
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc--cCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA--YQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~~ 195 (320)
.+++++||+|........+-+.... ...+.+|++||+++.+. . . .+....+..+.. ...++.+.||||..
T Consensus 50 ~~i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vflGD~VDRG~----~--s-~evl~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 50 CPVTVCGDVHGQFHDLMELFRIGGK-SPDTNYLFMGDYVDRGY----Y--S-VETVTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCC-TTTSCEEECSCCSSSST----T--H-HHHHHHHHHHHHHCTTTEEECCCTTSST
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCC-CCCCEEEEeCCccCCCC----C--h-HHHHHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 4689999999754322222222222 25677899999997532 1 1 122333333322 33599999999985
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0014 Score=48.19 Aligned_cols=85 Identities=24% Similarity=0.277 Sum_probs=53.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCCC----CeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPGT----NTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+.+..-. .+++.|+|.-...... ..|+|............ . ...-.....|++|+|++.
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~ 86 (119)
T 2ed7_A 19 SAPRDVVPVLVS--SRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----T------TQPGSLQLTVGNLKPEAM 86 (119)
T ss_dssp CCCSCCEEEEEC--SSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----C------CCTTCCEEEECSCCSSSE
T ss_pred cCCcceEEEecC--CCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----e------ecCCceEEEeCCCCCCCE
Confidence 378888777543 5799999987643322 35556554432221110 0 001133578999999999
Q ss_pred EEEEeCc------CCceeeEEEECCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|.+||.. +.+|+...++|.+.
T Consensus 87 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 87 YTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 9999964 35678888999764
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0011 Score=47.85 Aligned_cols=81 Identities=10% Similarity=0.107 Sum_probs=52.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+.+..- ..+++.|+|...... ....|+|............. . ...+.|++|+|+|.|
T Consensus 10 ~P~~l~~~~~--~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~--~~~~~i~~L~p~t~Y 74 (106)
T 2ed8_A 10 PVENLQAVST--SPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEV-----------D--GLSYKLEGLKKFTEY 74 (106)
T ss_dssp CCEEEEEECS--STTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEEE-----------C--SSCEEEESCCTTCEE
T ss_pred CCceeEEEec--CCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEeC-----------C--ccEEEECCCCCCCEE
Confidence 6777766543 358999999976422 23566776654332211110 0 134679999999999
Q ss_pred EEEeCc------CCceeeEEEECCCC
Q 045849 92 YYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.+||.. +.+|....|+|...
T Consensus 75 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 75 SLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 999964 23567788888654
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0012 Score=48.17 Aligned_cols=82 Identities=15% Similarity=0.235 Sum_probs=51.1
Q ss_pred CCccEEEEeeCCCCCcEEEEE--EeCCCC---CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSW--VTVDEP---GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W--~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+++..- ..+++.|+| .-.... ....|+|....+ . . .+... ... ++|+||+|+|.
T Consensus 12 ~p~~l~~~~~--~~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~----~--~---~~~~~--~~~----~~i~~L~p~t~ 74 (107)
T 1x5a_A 12 SGLSLKLVKK--EPRQLELTWAGSRPRNPGGNLSYELHVLNQDE----E--W---HQMVL--EPR----VLLTKLQPDTT 74 (107)
T ss_dssp CSCCCCEEEE--ETTEEEEECCCCCSSCCSSCCEEEEEEECSSC----E--E---EEEES--SSE----EEEESCCSSCE
T ss_pred CCCceEEEec--CCCEEEEEECCCCCCCCCCceEEEEEEEeCCC----C--c---eEEEe--cce----EEECCCCCCCE
Confidence 4556666543 358999999 654322 224556654311 0 0 11100 111 88999999999
Q ss_pred EEEEeCc------CCceeeEEEECCCCCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPEVGP 114 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~~~~ 114 (320)
|.+||.. +.+|....|+|.+..++
T Consensus 75 Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 75 YIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 9999964 45788889999876654
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00086 Score=48.84 Aligned_cols=83 Identities=17% Similarity=0.260 Sum_probs=54.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCC-C-C-ceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENS-E-Q-KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
.|..+++..-. .+++.|+|.-.... ....|+|....+ . . ...... .. ..+.|++|+|+
T Consensus 10 ~p~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~-----------~~--~~~~i~~L~p~ 74 (109)
T 2e7h_A 10 AVSDIRVTRSS--PSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKT-----------SE--NRAELRGLKRG 74 (109)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEEE-----------SS--SEEEEESCCTT
T ss_pred CCCccEEEecC--CCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEcc-----------CC--CEEEECCCCCC
Confidence 46777776443 58999999876432 235677766541 1 1 111111 01 15789999999
Q ss_pred CEEEEEeCc------CCceeeEEEECCCCCC
Q 045849 89 TKYYYVVGI------GHTERQFWFVTPPEVG 113 (320)
Q Consensus 89 t~Y~Y~v~~------~~~s~~~~F~t~p~~~ 113 (320)
|.|.+||.. +.+|....|+|.+...
T Consensus 75 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 105 (109)
T 2e7h_A 75 ASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105 (109)
T ss_dssp SCEEEEEEEECSSCBCCCCSCEECCCCCCSS
T ss_pred CeEEEEEEEEeCCccCCCCCCEEEEcCCCCC
Confidence 999999964 3578888999987543
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0007 Score=49.61 Aligned_cols=83 Identities=13% Similarity=0.245 Sum_probs=51.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.|..+++.. ...+++.|+|...... ....|+|............ . .. ...+.|++|+|+|.|.+
T Consensus 20 ~P~~l~~~~--~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~------~~--~~~~~i~~L~p~t~Y~~ 85 (115)
T 1x5z_A 20 QPLNFKAEP--ESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----I------EP--GTSYRLQGLKPNSLYYF 85 (115)
T ss_dssp CCEEEEEEC--SSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----E------CS--SSEEEEECCCTTCEEEE
T ss_pred CCccCEeee--CCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe----c------CC--CcEEEECCCCCCCeEEE
Confidence 566666543 4468999999986432 2345556544332211100 0 01 13577999999999999
Q ss_pred EeCc------CCceeeEEEECCCCC
Q 045849 94 VVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 94 ~v~~------~~~s~~~~F~t~p~~ 112 (320)
||.. +.+|....|+|.+..
T Consensus 86 ~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 86 RLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp CEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEEECCCcccCCCcCEEEecCCCC
Confidence 9964 246778889997653
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0035 Score=51.10 Aligned_cols=88 Identities=14% Similarity=0.092 Sum_probs=53.4
Q ss_pred cCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCC--------CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEE
Q 045849 9 QVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDE--------PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHC 80 (320)
Q Consensus 9 ~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~--------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (320)
..|+ ..|..+.+.... .++++|+|.-... .....|+|.............. .-...+
T Consensus 2 d~P~--~~P~~l~~~~~~--~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~ 66 (211)
T 3p4l_A 2 DLPM--MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN-----------ATTLSY 66 (211)
T ss_dssp -CCC--CCCEEEEEEECS--SSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEE-----------ESSSEE
T ss_pred CCCC--CCCCCEEEEecC--CCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeC-----------CCceEE
Confidence 3455 378888776543 5799999997421 1235677765443211111000 112357
Q ss_pred EecCCCCCCEEEEEeCc------CCceeeEEEECCCC
Q 045849 81 TIRHLEFNTKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 81 ~l~~L~p~t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.|++|+|+|.|.++|.. +.+|....++|.+.
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 67 LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred EecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 79999999999999964 24566788888653
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00031 Score=61.54 Aligned_cols=72 Identities=15% Similarity=0.156 Sum_probs=41.1
Q ss_pred CeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCcc
Q 045849 117 PYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHEI 194 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 194 (320)
..+++++||+|........+-+........+.+|++||+++.+.. . .+....+..+. ....++.+.||||.
T Consensus 59 ~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~------s-~evl~lL~~lk~~~p~~v~~lrGNHE~ 131 (315)
T 3h63_A 59 TEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSF------S-VEVILTLFGFKLLYPDHFHLLRGNHET 131 (315)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTT------H-HHHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcC------h-HHHHHHHHHhhhhcCCcEEEEecCccc
Confidence 468999999997643222222222222233569999999976421 1 11222222221 23458899999996
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 132 ~ 132 (315)
T 3h63_A 132 D 132 (315)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0018 Score=46.82 Aligned_cols=85 Identities=16% Similarity=0.117 Sum_probs=51.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|..+.+.... .+ +.|+|.-.... ....|+|.......+... ..... ...-...++|++|+|+|.
T Consensus 9 ~P~~~~~~~~~--~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~---~~~~~----~~~~~~~~~i~~L~p~t~ 78 (105)
T 2haz_A 9 SPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK---WYDAK----EASMEGIVTIVGLKPETT 78 (105)
T ss_dssp CCEEEEEEECS--SC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE---EEEHH----HHHHHSEEEECSCCTTCE
T ss_pred CCCCCEEEEcC--Cc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc---eEEcc----ccCCccEEEECCCCCCCE
Confidence 37666665543 35 99999976422 234577776554322111 00000 001123578999999999
Q ss_pred EEEEeCc------CCceeeEEEECCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
|.+||.. +..|+...|+|.|
T Consensus 79 Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 79 YAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCcCCEeeEEec
Confidence 9999964 3567888999976
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0012 Score=48.84 Aligned_cols=87 Identities=20% Similarity=0.319 Sum_probs=54.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC--CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE--PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.|..+.+..-. .+++.|+|..... .....|+|.......... ...... .....+.|+||+|+|.|.+
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~---~~~~~~------~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 2ee2_A 21 APTEVGVKVLS--SSEISVHWEHVLEKIVESYQIRYWAAHDKEEAA---NRVQVT------SQEYSARLENLLPDTQYFI 89 (119)
T ss_dssp CCCSCEEEEEE--TTEEEEECCCCSCTTCCEEEEEEEESSSCGGGC---EEEEEE------TTCSEEEECSCCTTCEEEE
T ss_pred CCCcEEEEEcc--CCEEEEEecCCCCCccceEEEEEEECCCcccCc---EEEEcC------CCEeEEEECCCCCCCEEEE
Confidence 56677765433 5799999998743 224567776554321100 000100 1123578999999999999
Q ss_pred EeCc------CCceeeEEEECCCCCC
Q 045849 94 VVGI------GHTERQFWFVTPPEVG 113 (320)
Q Consensus 94 ~v~~------~~~s~~~~F~t~p~~~ 113 (320)
||.. +.+|....|+|.+.+.
T Consensus 90 ~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 90 EVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp EEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred EEEEEcCCccCCCCCCEEEECCCCCC
Confidence 9964 3567788899976543
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0016 Score=47.46 Aligned_cols=84 Identities=13% Similarity=0.139 Sum_probs=52.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC-C----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE-P----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~-~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+.. ....++++|.|..... . ....|+|.......+..+. . ......+|++|+|++.
T Consensus 11 ~P~~~~~~~-~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t~ 77 (110)
T 2crz_A 11 PCLPPRLQG-RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q-----------GSEVECTVSSLLPGKT 77 (110)
T ss_dssp CCCCCEECS-CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E-----------ESCSEEEEESCCTTCE
T ss_pred CCCCceecc-ccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e-----------CCcEEEEECCcCCCCE
Confidence 677776632 2345899999965421 1 2356777654433332221 0 0122467899999999
Q ss_pred EEEEeCc------CCceeeEEEECCCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~~ 112 (320)
|.|||.. +.+|+...++|.+.+
T Consensus 78 Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 78 YSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEEEEEcCCccCCCCCccccccCCCC
Confidence 9999964 356778888887643
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0014 Score=47.43 Aligned_cols=88 Identities=14% Similarity=0.124 Sum_probs=53.1
Q ss_pred CCCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 14 YNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 14 ~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
...|..+++.--. .+++.|+|.-........|+|.......+... ..... ... .+.|+||+|+|.|.+
T Consensus 9 ~~~P~~l~~~~~~--~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~--~~~~~-----~~~---~~~l~~L~p~t~Y~~ 76 (104)
T 2dkm_A 9 LPPPRALTLAAVT--PRTVHLTWQPSAGATHYLVRCSPASPKGEEEE--REVQV-----GRP---EVLLDGLEPGRDYEV 76 (104)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSSCSEEEEEEEESSSCCSSCC--EEEEE-----SSS---EEEEESCCTTCCEEE
T ss_pred CCCCceeEEEecC--CCEEEEEEeCCCCCCeEEEEEEECCCCCCcce--EEEec-----CCC---EEEECCCCCCCEEEE
Confidence 3478888876543 58999999776544445677765443211100 00010 011 688999999999999
Q ss_pred EeCcC---Cce--eeEEEECCCCCC
Q 045849 94 VVGIG---HTE--RQFWFVTPPEVG 113 (320)
Q Consensus 94 ~v~~~---~~s--~~~~F~t~p~~~ 113 (320)
+|..- +.+ ....++|.|.+.
T Consensus 77 ~V~A~~~~~~s~p~~~~~~T~p~~~ 101 (104)
T 2dkm_A 77 SVQSLRGPEGSEARGIRARTPTSGP 101 (104)
T ss_dssp EEEEECSSSBCCCEEEECCCCCCSC
T ss_pred EEEEECCCCCCCCEEEEEEcCCCCC
Confidence 99752 222 345677776543
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00029 Score=62.21 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=40.7
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh--hccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS--AAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD~~ 195 (320)
++.++||+|........+-+.... ...+-+|++||+++.+.. . .+....+..+ ...-.++.+.||||..
T Consensus 58 ~i~viGDIHG~~~~L~~ll~~~g~-~~~~~~vflGD~VDRG~~------s-~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 58 PLKICGDIHGQYYDLLRLFEYGGF-PPESNYLFLGDYVDRGKQ------S-LETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCS-TTSSCEEECSCCSSSSSC------H-HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred ceEEecCCCCCHHHHHHHHHHhCC-CCcceEEeCCCcCCCCCC------h-HHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 589999999764332222222222 245779999999975421 1 1222333222 2234589999999974
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00043 Score=61.09 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=41.9
Q ss_pred CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCc
Q 045849 116 VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHE 193 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD 193 (320)
...+++++||+|........+-+....+..-+.+|++||+++.+.. . .+....+..+. ....++.+.||||
T Consensus 62 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~------s-~evl~lL~~lk~~~p~~v~llrGNHE 134 (335)
T 3icf_A 62 PDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSW------S-CEVALLFYCLKILHPNNFFLNRGNHE 134 (335)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTT------H-HHHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred cCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcC------h-HHHHHHHHHHhhhCCCcEEEecCchh
Confidence 4579999999997643332222222221123569999999976421 1 11222222222 2345899999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 135 ~~ 136 (335)
T 3icf_A 135 SD 136 (335)
T ss_dssp SH
T ss_pred hh
Confidence 64
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0021 Score=46.12 Aligned_cols=83 Identities=16% Similarity=0.219 Sum_probs=52.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC--CCCCeEEEeccCCC-CceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE--PGTNTVVYWSENSE-QKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
.|..+.+.... .++++|+|..... .....|+|...... .+..+.. .......|++|+|++.|.
T Consensus 10 ~P~~~~~~~~~--~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~t~Y~ 75 (106)
T 2dju_A 10 PPIDLVVTETT--ATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDG------------VATTRYSIGGLSPFSEYA 75 (106)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCC------------CCSSEEEEESCCTTCEEE
T ss_pred CCCCcEEEecc--CCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccC------------CCccEEEEeCCCCCcEEE
Confidence 67777776533 5799999997631 12356777655432 1211110 011236789999999999
Q ss_pred EEeCc------CCceeeEEEECCCCC
Q 045849 93 YVVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 93 Y~v~~------~~~s~~~~F~t~p~~ 112 (320)
|||.. +.+|+...++|.+..
T Consensus 76 ~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 76 FRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EEEEEEeCCccCCCcccEEeEcCCCC
Confidence 99964 246777888887643
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00028 Score=62.90 Aligned_cols=70 Identities=16% Similarity=0.059 Sum_probs=43.1
Q ss_pred CCeEEEEEEcCCCCCCcHHHHHHHHhCC----------CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh-----h
Q 045849 116 VPYSFGLIGDLGQSYDSNVTLTHYERNP----------RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS-----A 180 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~----------~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 180 (320)
...+++++||+|... ..+.++.+.. .++|.+|++||+++.+. .. .+....+..+ .
T Consensus 69 ~~~~i~vigDiHG~~---~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~----~s---~evl~~l~~l~~~~~~ 138 (342)
T 2z72_A 69 GIKKVVALSDVHGQY---DVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGH----QV---NEVLWFMYQLDQQARD 138 (342)
T ss_dssp CCCEEEEECCCTTCH---HHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSS----CH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCH---HHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCC----CH---HHHHHHHHHHHHHHhh
Confidence 357899999999653 3333333311 14799999999996532 11 1222233332 2
Q ss_pred ccCCeEeCCCCCccc
Q 045849 181 AYQPWIWTAGNHEID 195 (320)
Q Consensus 181 ~~~P~~~~~GNHD~~ 195 (320)
...+++.+.||||..
T Consensus 139 ~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 139 AGGMVHLLMGNHEQM 153 (342)
T ss_dssp TTCEEEECCCHHHHH
T ss_pred CCCeEEEEecCCcHH
Confidence 335699999999974
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0015 Score=47.44 Aligned_cols=72 Identities=17% Similarity=0.084 Sum_probs=45.3
Q ss_pred CCCcEEEEEEeCCCC-----CCCeEEEeccCCC-CceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCcC---
Q 045849 28 VGKAVIVSWVTVDEP-----GTNTVVYWSENSE-QKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIG--- 98 (320)
Q Consensus 28 ~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~--- 98 (320)
..++++|+|...... ....|+|...... .+.... . .. ...++|++|+|++.|.|||..-
T Consensus 20 ~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------~----~~--~~~~~v~~L~p~t~Y~frV~A~n~~ 87 (109)
T 1x5x_A 20 GITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKY------D----GE--DLAYTVKNLRRSTKYKFKVIAYNSE 87 (109)
T ss_dssp CSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEE------E----ES--CSEEEEESCCSSCEEEEEEEEECSS
T ss_pred cCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeE------e----CC--ccEEEECCCCCCCEEEEEEEEEeCC
Confidence 458999999876432 2346667655432 121110 0 00 1246789999999999999752
Q ss_pred ---CceeeEEEECCCC
Q 045849 99 ---HTERQFWFVTPPE 111 (320)
Q Consensus 99 ---~~s~~~~F~t~p~ 111 (320)
.+|....++|.+.
T Consensus 88 G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 88 GKSNPSEVVEFTTCPD 103 (109)
T ss_dssp CEEEECCCEEEECCCC
T ss_pred CCcCCccCEEeEeCCC
Confidence 3567778888764
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00057 Score=63.81 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=41.6
Q ss_pred CeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhh--hhccCCeEeCCCCCcc
Q 045849 117 PYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER--SAAYQPWIWTAGNHEI 194 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~~~~~GNHD~ 194 (320)
..+++++||+|........+-+....+...+.+|++||+++.+.. ..+. ...+.. +.....++.+.||||.
T Consensus 212 ~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~------s~e~-~~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 212 TEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSF------SVEV-ILTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp SCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTT------HHHH-HHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcc------hHHH-HHHHHHHHhhCCCceEeecCCccH
Confidence 468999999997633222222222222234669999999975321 1112 222222 2234579999999996
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 285 ~ 285 (477)
T 1wao_1 285 D 285 (477)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.002 Score=48.26 Aligned_cols=86 Identities=12% Similarity=0.186 Sum_probs=53.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+++.... .+++.|+|....... ...|+|........... .... ......+.|++|+|+|.|
T Consensus 30 ~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~---~~~~------~~~~~~~~i~~L~p~t~Y 98 (130)
T 1wfo_A 30 PPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT---VEVL------APSARQYTATGLKPESVY 98 (130)
T ss_dssp CCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC---EEEE------CTTCCEEEEESCCSSSEE
T ss_pred CCCceEEEecC--CCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEE---EEEe------CCCceEEEEcCCCCCCEE
Confidence 67777776543 589999998764322 34566765443211000 0000 111335779999999999
Q ss_pred EEEeCc------CCceeeEEEECCCCC
Q 045849 92 YYVVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t~p~~ 112 (320)
.+||.. +.+|....|+|.+..
T Consensus 99 ~~~V~A~n~~G~g~~S~~~~~~T~~~~ 125 (130)
T 1wfo_A 99 LFRITAQTRKGWGEAAEALVVTTEKRS 125 (130)
T ss_dssp EEEEEEECSSCEEEEEEEEEECCSSCC
T ss_pred EEEEEEEeCCcCCCCcccEEEecCCCC
Confidence 999964 246777789987543
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00058 Score=50.04 Aligned_cols=81 Identities=17% Similarity=0.191 Sum_probs=50.0
Q ss_pred EEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeC
Q 045849 21 HITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVG 96 (320)
Q Consensus 21 ~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 96 (320)
.+.......++++|+|.-.... ....|+|.......+..+. . ......+|++|+|++.|.|||.
T Consensus 16 ~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~------~------~~~~~~~v~~L~p~t~Y~frV~ 83 (110)
T 2db8_A 16 QLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY------V------GKETMCTVDGLHFNSTYNARVK 83 (110)
T ss_dssp CCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE------E------ESCSCEEEECCCSSSCCEEEEE
T ss_pred cceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE------e------CCcCEEEECCCCCCCEEEEEEE
Confidence 3333333468999999976532 2345677654332222211 0 0012367899999999999996
Q ss_pred c------CCceeeEEEECCCCCC
Q 045849 97 I------GHTERQFWFVTPPEVG 113 (320)
Q Consensus 97 ~------~~~s~~~~F~t~p~~~ 113 (320)
. +.+|+...|+|.+.+.
T Consensus 84 A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 84 AFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp EECSSCBCCCCSCEECCCCCCCC
T ss_pred EEeCCcCCCCCCCEEEEcCCCCC
Confidence 4 3467888899977553
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0025 Score=47.90 Aligned_cols=82 Identities=16% Similarity=0.270 Sum_probs=49.3
Q ss_pred CCc-cEEEEeeCCCCCcEEEEEEeCCCCC-CC-eEEEeccC-----------CCCceEEEEEEEEEEeccccceEEEEEE
Q 045849 16 APQ-QVHITQGDLVGKAVIVSWVTVDEPG-TN-TVVYWSEN-----------SEQKEQAEGKVYTYKYYNYTSGYIHHCT 81 (320)
Q Consensus 16 ~p~-~v~l~~~~~~~~~~~v~W~t~~~~~-~~-~v~y~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
+|. .+.+.- ...++++|+|......+ .. .++|.... ...+..+.. . . ....+
T Consensus 18 ~P~~~~~~~~--~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~-~---------~--~~~~~ 83 (127)
T 2dmk_A 18 PPSIREELCT--ASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN-I---------K--QNHYT 83 (127)
T ss_dssp CCEEEEEEEE--EETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE-E---------C--SSEEE
T ss_pred CCCCCCEEEe--eeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec-c---------c--CCeEE
Confidence 675 555443 34589999999875332 22 67776511 011222111 0 0 11357
Q ss_pred ecCCCCCCEEEEEeCcC-----CceeeEEEECCCC
Q 045849 82 IRHLEFNTKYYYVVGIG-----HTERQFWFVTPPE 111 (320)
Q Consensus 82 l~~L~p~t~Y~Y~v~~~-----~~s~~~~F~t~p~ 111 (320)
|+||+|++.|.|||..- ..|....++|.+.
T Consensus 84 v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 84 VHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred ECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 89999999999999652 3456778888753
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.01 Score=54.62 Aligned_cols=137 Identities=15% Similarity=0.128 Sum_probs=78.1
Q ss_pred CCeEEEEEEcCCCCCCcH---HH---HHHHHh-C---------CCCCceEEEcccccccCCCCCCC--------------
Q 045849 116 VPYSFGLIGDLGQSYDSN---VT---LTHYER-N---------PRKGQTLLFVGDLSYADNYPCHD-------------- 165 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~---~~---l~~~~~-~---------~~~~d~vl~~GD~~~~~~~~~~~-------------- 165 (320)
...++++++|+|.+.... .. +..++. . ..+...+|++||.+...+.....
T Consensus 199 ~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~ 278 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAA 278 (476)
T ss_dssp SCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHH
T ss_pred CCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchh
Confidence 467899999999887531 11 222221 1 13678999999999764321100
Q ss_pred -ChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcc---c-C---cccceeeeCCCCCCCCCCCcEEEEEeCcEEE
Q 045849 166 -NNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETV---P-F---KPYSHRYHVPYRASGSTAPFWYSIKRASVYI 237 (320)
Q Consensus 166 -~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~---~-~---~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~f 237 (320)
....+.+..++..+...+|+...|||||-... ...... . | ..|. .+.. ...=|.+++++++|
T Consensus 279 ~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~-~lPQqplh~~lfp~s~~~~-~~~~--------vtNP~~~~i~G~~~ 348 (476)
T 3e0j_A 279 SVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY-TLPQQPLHPCMFPLATAYS-TLQL--------VTNPYQATIDGVRF 348 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS-SSSCCCCCTTSCHHHHTST-TEEE--------CCSSEEEEETTEEE
T ss_pred hHHHHHHHHHHHHhcccCceEEecCCCCCcccc-cCCCCCcCHHHhhhhhhcC-ccEE--------eCCCeEEEECCEEE
Confidence 01334566777778889999999999997521 111100 0 0 0111 1111 11235688999999
Q ss_pred EEEcccC-----CCCCChHHHHHHHHhccc
Q 045849 238 IVLSSYS-----AYGKYTPQYKWLEEELPK 262 (320)
Q Consensus 238 i~lds~~-----~~~~~~~q~~WL~~~L~~ 262 (320)
++..... .+...+.-++.++..|+.
T Consensus 349 LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 349 LGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp EECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred EEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 9865421 122345567788888875
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0037 Score=46.29 Aligned_cols=71 Identities=20% Similarity=0.214 Sum_probs=43.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccC-CCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSEN-SEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+..- ..++++|.|.-.... ....|+|.... ...+..+.... ..-...++|++|+|++.
T Consensus 20 ~P~~~~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~---------~~~~~~~~v~~L~p~t~ 88 (121)
T 1x4z_A 20 APDRPTISTA--SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAI---------PPSRLSVEITGLEKGIS 88 (121)
T ss_dssp CCCCCEEEEC--CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEE---------CTTCCEEEEESCCTTCE
T ss_pred cCCCCEEEEc--cCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeeccc---------CCCcCEEEECCCCCCCE
Confidence 6777766543 358999999954322 23467777654 22333221110 01123567899999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.|||..
T Consensus 89 Y~frV~A 95 (121)
T 1x4z_A 89 YKFRVRA 95 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0015 Score=47.79 Aligned_cols=90 Identities=11% Similarity=0.050 Sum_probs=56.3
Q ss_pred CCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCC
Q 045849 10 VPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHL 85 (320)
Q Consensus 10 ~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 85 (320)
.|.+...|..+.+... .++++++|.-.... ....|+|... +..+..+... + ..-.....|.+|
T Consensus 4 tpep~~pP~~l~v~~~---~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~~---~------~~~~t~~~v~~L 70 (108)
T 1v5j_A 4 GSSGLSPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDPA---V------AGTETELLVPGL 70 (108)
T ss_dssp CCCCCCCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEEE---E------CSSCCEEECCCC
T ss_pred CCCCCCCCcceEEEEe---CCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeeee---c------CCCcCEEEeCCC
Confidence 4566678888887642 47899999987532 2356788773 3334332211 1 011224669999
Q ss_pred CCCCEEEEEeCcC------CceeeEEEECCCCC
Q 045849 86 EFNTKYYYVVGIG------HTERQFWFVTPPEV 112 (320)
Q Consensus 86 ~p~t~Y~Y~v~~~------~~s~~~~F~t~p~~ 112 (320)
+|++.|.+||..- ..|+...++|....
T Consensus 71 ~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~ 103 (108)
T 1v5j_A 71 IKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLS 103 (108)
T ss_dssp CTTSCEECCBEEEETTEEEEECSCCCCCCSSCS
T ss_pred CCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCcc
Confidence 9999999999652 23455666665443
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00055 Score=59.46 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=40.4
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh--hccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS--AAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD~~ 195 (320)
+++++||+|........+-+.... ...+-+|++||+++.+.. . .+....+..+ .....++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~-~~~~~~vfLGD~VDrG~~------s-~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGF-PPESNYLFLGDYVDRGKQ------S-LETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCS-TTSSCEEECSCCSSSSSC------H-HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCC-CCCccEEeCCcccCCCCC------c-HHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 589999999764333222222222 255778999999976431 1 1112222222 2234589999999974
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0049 Score=44.30 Aligned_cols=84 Identities=14% Similarity=0.168 Sum_probs=50.7
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCC------CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDE------PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
.+|..+.+..-. ++++.|+|..... ...-.|.|........... ...... . . ...+.|.+|+|+
T Consensus 6 ~~P~~~~~~~~s--~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~--~~~~v~--~--~--~~~~~l~~L~p~ 75 (102)
T 3n1f_C 6 TGPHIAYTEAVS--DTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDY--KRDVVE--G--S--KQWHMIGHLQPE 75 (102)
T ss_dssp SCCEEEEEEECS--SSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGC--EEEEEE--T--T--CSEEEECSCCTT
T ss_pred CCCceeEEEEcC--CCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCce--EEEEEc--C--C--ceEEECCCCCCC
Confidence 478777776543 5899999987642 1234688887653210000 001111 0 1 123689999999
Q ss_pred CEEEEEeCc------CCceeeEEEEC
Q 045849 89 TKYYYVVGI------GHTERQFWFVT 108 (320)
Q Consensus 89 t~Y~Y~v~~------~~~s~~~~F~t 108 (320)
|.|.++|.. |..|....++|
T Consensus 76 t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 76 TSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp CEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred CEEEEEEEEECCCcCCCCCCCEEeec
Confidence 999999954 34566667776
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0013 Score=48.98 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=52.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC--C----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE--P----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+.+.... .+++.|+|..... . ....|+|........... . ..-...+.|.+|+|+|
T Consensus 31 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------~------~~~~~~~~i~~L~p~t 96 (124)
T 2ed9_A 31 PPQNVSLEVVN--SRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------L------EPNNLWYLFTGLEKGS 96 (124)
T ss_dssp CCBSCCEEEEE--TTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------E------CSSCSEEEEECCCSSC
T ss_pred CCeeeEEEEcC--CCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------e------cCCcCEEEEcCCCCCC
Confidence 57777776543 4799999998753 1 235667766544322111 0 0112346799999999
Q ss_pred EEEEEeCc------CCceeeEEEECCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
.|.+||.. +.+|....|+|..
T Consensus 97 ~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 97 QYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999964 3577888898863
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.002 Score=48.13 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=27.2
Q ss_pred EEEecCCCCCCEEEEEeCcC------CceeeEEEECCCCC
Q 045849 79 HCTIRHLEFNTKYYYVVGIG------HTERQFWFVTPPEV 112 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~v~~~------~~s~~~~F~t~p~~ 112 (320)
.++|++|+|+|.|.+||..- .+|+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 37899999999999999752 35677889997653
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0064 Score=44.00 Aligned_cols=74 Identities=19% Similarity=0.185 Sum_probs=45.5
Q ss_pred eeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc--
Q 045849 24 QGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI-- 97 (320)
Q Consensus 24 ~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~-- 97 (320)
..+.+.++++++|.....+. ...|.|..... .. ... .-...++|+||+|||.|.++|..
T Consensus 16 v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~----~~-----~~~------~~~t~~~i~gL~PgT~Y~~~V~A~~ 80 (104)
T 2dle_A 16 AVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD----SS-----NLN------VSEPRAVIPGLRSSTFYNITVCPVL 80 (104)
T ss_dssp EEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC----EE-----EEE------ESSSEEECCSCCSSCEEEEEEEEES
T ss_pred EEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC----eE-----EEc------CCCCEEEECCCCCCCEEEEEEEEEE
Confidence 34445689999999664332 24566654321 10 000 01235889999999999999975
Q ss_pred C---CceeeEEEECCCCC
Q 045849 98 G---HTERQFWFVTPPEV 112 (320)
Q Consensus 98 ~---~~s~~~~F~t~p~~ 112 (320)
+ ..+....+.|.|.+
T Consensus 81 ~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 81 GDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp SSCCCBCEEEEEECCCCS
T ss_pred CCcccCCeeEEEEccCCC
Confidence 2 23456677887654
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0008 Score=59.75 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=40.9
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 195 (320)
+++++||+|........+-+.... ...+-+|++||+++.+.. . .+-...+..+. ....++.+.||||..
T Consensus 71 pi~ViGDIHG~~~dL~~ll~~~g~-~~~~~~vfLGD~VDRG~~------s-~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 71 PVTVCGDIHGQFFDLMKLFEVGGS-PANTRYLFLGDYVDRGYF------S-IECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCC-TTTCCEEECSCCSSSSTT------H-HHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred cceeeccCCCCHHHHHHHHHhcCC-CCCcEEEECCCccCCCcC------h-HHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 589999999764333222222233 256889999999976421 1 11122222222 233589999999974
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0022 Score=47.38 Aligned_cols=75 Identities=23% Similarity=0.347 Sum_probs=46.1
Q ss_pred CCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCcC---Cc
Q 045849 28 VGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIG---HT 100 (320)
Q Consensus 28 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~---~~ 100 (320)
..++++|+|.-....+ .-.|+|.......+..... .. .....++|.+|+|++.|.+||... +.
T Consensus 20 ~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----~~------~~~~~~~l~~L~p~t~Y~frV~A~N~~G~ 89 (114)
T 2kbg_A 20 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----VQ------GNKDHIILEHLQWTMGYEVQITAANRLGY 89 (114)
T ss_dssp STTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----EE------TTTCCEEECCCCTTCCEEEEEEEECTTSC
T ss_pred CCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----cC------CCcCEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence 4689999998643222 2477888764433322111 00 011246799999999999999752 22
Q ss_pred --eeeEEEECCCCC
Q 045849 101 --ERQFWFVTPPEV 112 (320)
Q Consensus 101 --s~~~~F~t~p~~ 112 (320)
.....|+|.+.+
T Consensus 90 s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 90 SEPTVYEFSMPPKP 103 (114)
T ss_dssp EEEEEEEECCCCCC
T ss_pred cCCcCCEEEcCCCC
Confidence 235678896544
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00072 Score=62.69 Aligned_cols=70 Identities=16% Similarity=0.162 Sum_probs=41.4
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 195 (320)
.+++++||+|........+-++... ...+-+|++||+++.+.. . .+....+..+. ..-.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~-p~~d~yVFLGDyVDRGp~------S-~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGS-PANTRYLFLGDYVDRGYF------S-IECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCC-TTTCCEEECSCCSSSSSC------H-HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCC-CCcceEEEcCCcCCCCCC------H-HHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 3589999999764333332233333 246889999999976421 1 12222222222 223489999999974
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0022 Score=49.03 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=27.4
Q ss_pred EEEecCCCCCCEEEEEeCc------CCceeeEEEECCCC
Q 045849 79 HCTIRHLEFNTKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.++|+||+|+|.|..||.. |..|+...|+|.+.
T Consensus 83 s~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 5789999999999999964 34678888999754
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0039 Score=45.99 Aligned_cols=88 Identities=16% Similarity=0.209 Sum_probs=53.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC------CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE------PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+.+... ..+++.|+|..... .....|+|........... ..... ....-...+.|++|+|+|
T Consensus 18 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~i~~L~p~t 89 (122)
T 1va9_A 18 PPMDVTLQPV--TSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY--SIVEM----KATGDSEVYTLDNLKKFA 89 (122)
T ss_dssp CCEEEEEEEC--SSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC--BCCBC----CCCSSEEEEEEESCCSSC
T ss_pred CCcceEEEec--cCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce--EEEEE----ecCCceeEEEeCCCCCCC
Confidence 5666766543 35899999998753 1235667766543211000 00000 001123567899999999
Q ss_pred EEEEEeCc------CCceeeEEEECCCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.|.+||.. +.+|....|+|.+.
T Consensus 90 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 90 QYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp CEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 99999964 35677788888654
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0056 Score=44.52 Aligned_cols=82 Identities=16% Similarity=0.069 Sum_probs=52.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCC---C----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDE---P----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 87 (320)
..|..+.+..-....+++.|+|..... + -...|+|....+..+..+... . ...+.|.+|+|
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~----------~--~~~~~l~~L~p 76 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS----------N--GTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEES----------S--CSEEEETTCCS
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecc----------c--CCEEEEeCCCC
Confidence 368788877644345899999998642 1 245778877654322221110 0 12467899999
Q ss_pred CCEEEEEeCcC--------CceeeEEEEC
Q 045849 88 NTKYYYVVGIG--------HTERQFWFVT 108 (320)
Q Consensus 88 ~t~Y~Y~v~~~--------~~s~~~~F~t 108 (320)
|+.|..||... .||....++|
T Consensus 77 ~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 77 GKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp SSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred CCEEEEEEEEEeCCCCCcCcCCCCeeeee
Confidence 99999999752 3566655554
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.013 Score=42.61 Aligned_cols=83 Identities=19% Similarity=0.193 Sum_probs=52.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCce--EEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKE--QAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
..|..+.+. +..++++.|+|.-.... ....|.|....+.... .+.+. ...+.|++|+|+|.|
T Consensus 9 ~pP~~l~~~--~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~v~~~-------------~t~~~l~~L~p~T~Y 73 (108)
T 2ee3_A 9 APPRHLGFS--DVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPGN-------------ATSAMLGPLSSSTTY 73 (108)
T ss_dssp CCSSCEEEE--SCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEEEETT-------------CCEEEECSCCSSCEE
T ss_pred CCCceEEEE--EccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEEcCCC-------------cCEEEcCCCCCCCEE
Confidence 478887765 45578999999875432 3457788765432211 11111 124789999999999
Q ss_pred EEEeCcC---Cce--eeEEEECCCCC
Q 045849 92 YYVVGIG---HTE--RQFWFVTPPEV 112 (320)
Q Consensus 92 ~Y~v~~~---~~s--~~~~F~t~p~~ 112 (320)
..+|..- +.+ -...|+|.+.+
T Consensus 74 ~v~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 74 TVRVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp EEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred EEEEEEEeCCCcCCCccCEEEeCCCC
Confidence 9999641 222 23468886433
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.009 Score=43.79 Aligned_cols=83 Identities=11% Similarity=0.149 Sum_probs=51.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCCC----eEEEeccCC-CCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGTN----TVVYWSENS-EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+.--. .+++.|.|......... .|+|..... ..+.... . ... ...+|++|+|++.
T Consensus 20 ~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~------~~~--~~~~v~~L~p~t~ 85 (118)
T 1x3d_A 20 IPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY----M------GSQ--KQFKITKLSPAMG 85 (118)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE----E------ESC--SEEEEESCCTTCE
T ss_pred CCCCcEEeccC--CCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEee----c------cCC--cEEEeCCCCCCCE
Confidence 67777665433 57999999987533333 445544332 1121110 0 011 2467899999999
Q ss_pred EEEEeCc------CCceeeEEEECCCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~~ 112 (320)
|.|||.. +.+|+...|+|.+..
T Consensus 86 Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 86 CKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 9999964 246777788887543
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0082 Score=44.92 Aligned_cols=84 Identities=19% Similarity=0.237 Sum_probs=49.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC--CCCCe----EEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE--PGTNT----VVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+.+. ....+++.|+|..... ..... |+|..... . ....... .......++|++|+|+|
T Consensus 21 ~P~~l~~~--~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~----~--~~~~~~~----~~~~~~~~~i~~L~p~t 88 (132)
T 1x5h_A 21 APQNLSLE--VRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASR----K--SDVTETL----VSGTQLSQLIEGLDRGT 88 (132)
T ss_dssp CCEEEEEE--CCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTE----E--EEEECCB----CCTTCCEEEEECCCSSC
T ss_pred CCeeeEEE--eCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCC----C--CccEEEE----eCCCccEEEeCCCCCCC
Confidence 45555554 3446899999998753 22233 34443221 0 0000000 11123457899999999
Q ss_pred EEEEEeCc------CCceeeEEEECCCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.|.++|.. +.+|....|+|.+.
T Consensus 89 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 89 EYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 99999965 24677888999763
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0036 Score=46.02 Aligned_cols=70 Identities=17% Similarity=0.185 Sum_probs=41.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC---CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG---TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
.|..+.+.. ...+++.|+|.-....+ ...|+|.......+... .. ...-...+.|++|+|++.|.
T Consensus 20 ~P~~l~~~~--~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~-----~~-----~~~~~~~~~i~~L~p~t~Y~ 87 (118)
T 2yrz_A 20 TPTRLVFSA--LGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRL-----NI-----PNPAQTSVVVEDLLPNHSYV 87 (118)
T ss_dssp CCCCCEECC--CBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEE-----EE-----SCTTCCEEEEESCCTTCEEE
T ss_pred CCCceEEEe--CCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEE-----Ec-----CCCCcCEEEeCCCCCCCEEE
Confidence 677776543 34689999998765432 23455655433211111 00 00112357789999999999
Q ss_pred EEeCc
Q 045849 93 YVVGI 97 (320)
Q Consensus 93 Y~v~~ 97 (320)
+||..
T Consensus 88 ~~V~A 92 (118)
T 2yrz_A 88 FRVRA 92 (118)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.012 Score=42.20 Aligned_cols=80 Identities=15% Similarity=0.207 Sum_probs=47.9
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|. +.+... ..+++.|+|...... ....|+|.......+... ... .-....+|++|+|+|.|
T Consensus 10 ~p~-~~v~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y 75 (107)
T 2dn7_A 10 RPT-MMISTT--AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----DFG------KDDQHFTVTGLHKGTTY 75 (107)
T ss_dssp CCE-EEEEEC--STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----EEE------TTCCEEEEECCCTTCEE
T ss_pred CCc-EeEEec--CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-----EeC------CCccEEEeCCCCCCCEE
Confidence 344 555544 568999999986422 234677776543322221 100 11225679999999999
Q ss_pred EEEeCcC------CceeeEEEECCC
Q 045849 92 YYVVGIG------HTERQFWFVTPP 110 (320)
Q Consensus 92 ~Y~v~~~------~~s~~~~F~t~p 110 (320)
.+||..- ..+. ..|+|..
T Consensus 76 ~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 76 IFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEEEEEcCCcccCCee-eEEeCCC
Confidence 9999652 2344 4577753
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0015 Score=48.39 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=49.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-----CCCeEEEeccCC-CCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-----GTNTVVYWSENS-EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+.+. .....+++.|+|...... ....|+|..... ..+..+.. .. ....+|++|+|++
T Consensus 20 ~P~~~~~~-~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~----------~~--~~~~~v~~L~p~t 86 (120)
T 2crm_A 20 IPVKPSVK-GKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS----------GA--TREHLCDRLNPGC 86 (120)
T ss_dssp CCCCCEEE-EEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC----------SS--CSEEEECSCCTTS
T ss_pred CCCCCEEe-eccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEe----------cc--ccEEEECCCCCCC
Confidence 56665655 222357999999875432 234566665443 12222210 01 2246799999999
Q ss_pred EEEEEeCc------CCceeeEEEECCCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.|.|||.. +.+|+...++|.+.
T Consensus 87 ~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 87 FYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp CEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred EEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 99999964 24566667777643
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0074 Score=42.73 Aligned_cols=70 Identities=20% Similarity=0.274 Sum_probs=43.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCC-CceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSE-QKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
..|..+.+.--. .+++.|+|...... ....|+|...... ..... ... .-...+.|.+|+|+|.|.
T Consensus 3 ~~P~~l~v~~~~--~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~ 69 (98)
T 3teu_A 3 DAPTDLQVTNVT--DTSITVSWTPPSATITGYRITYTPSNGPGEPKEL-----TVP------PSSTSVTITGLTPGVEYV 69 (98)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEE-----EEC------TTCSEEEECSCCTTCEEE
T ss_pred CCCCceEEEEec--CCEEEEEEeCCCCcccEEEEEEEECCCCCceEEE-----EcC------CCcCEEEecCCCCCCEEE
Confidence 367777776433 47999999987432 2356778754321 11111 110 112347899999999999
Q ss_pred EEeCc
Q 045849 93 YVVGI 97 (320)
Q Consensus 93 Y~v~~ 97 (320)
++|..
T Consensus 70 ~~V~A 74 (98)
T 3teu_A 70 VSVYA 74 (98)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.007 Score=45.07 Aligned_cols=83 Identities=18% Similarity=0.166 Sum_probs=50.9
Q ss_pred cEEEEe-eCCCCCcEEEEEEeCCCC---CCCeEEEeccCC----CCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 19 QVHITQ-GDLVGKAVIVSWVTVDEP---GTNTVVYWSENS----EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 19 ~v~l~~-~~~~~~~~~v~W~t~~~~---~~~~v~y~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|+|-- ..-.++++.|+|.-.... ..-.|.|..... ..+... ... ..-...+.|+||+|+|.
T Consensus 18 ~v~l~~~~a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~-----~v~-----~~~~~~~~l~~L~p~T~ 87 (120)
T 1ujt_A 18 LVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL-----DAK-----VPTERSAVLVNLKKGVT 87 (120)
T ss_dssp CEEECCCCCCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE-----ECC-----CTTCCEEEEESCCSSEE
T ss_pred EEEeeccEEccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEE-----Eec-----CCCcCEEEECCCCCCCE
Confidence 455532 233568999999964211 134778887653 111111 000 11123578999999999
Q ss_pred EEEEeCc------CCceeeEEEECCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|.++|.. |..|+...|+|+..
T Consensus 88 Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 88 YEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp EEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred EEEEEEEECCCccCCCCCCEEEECCCC
Confidence 9999953 45788888999754
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.013 Score=41.82 Aligned_cols=69 Identities=20% Similarity=0.290 Sum_probs=43.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCC-ceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQ-KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.|..+.+.. ...+++.|+|.-.... ....|+|....... .... .. ..-...++|+||+|+|.|.+
T Consensus 4 ~P~~l~~~~--~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~-----~~------~~~~t~~~i~~L~p~t~Y~~ 70 (100)
T 3b83_A 4 PPFNIKVTN--ITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTV-----DL------TSSITSLTLTNLEPNTTYEI 70 (100)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEE-----EE------CTTEEEEEECSCCTTCEEEE
T ss_pred cCCccEEEE--ecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEE-----EE------CCcceEEEECCCCCCCEEEE
Confidence 677776654 4468999999876432 23567787554221 1111 00 11233578999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 71 ~V~A 74 (100)
T 3b83_A 71 RIVA 74 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.013 Score=42.92 Aligned_cols=83 Identities=19% Similarity=0.223 Sum_probs=49.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+++ .....+++.|+|.-.... ....|.|....... ... ... .-...+.|++|+|+|.|.+
T Consensus 9 ~~P~~l~~--~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~-~~~-----~v~------~~~t~~~l~~L~P~t~Y~~ 74 (115)
T 2cuh_A 9 DGPTQLRA--LNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPP-LQA-----ETP------GSAVDYPLHDLVLHTNYTA 74 (115)
T ss_dssp SSCEEEEC--CCCSSSCEEEEEECCSSCCSEEEEEEECSSSCC-EEE-----EEE------TTCSEEEECSCCSSSEEEE
T ss_pred CCCcceEE--EeccCCeEEEEEECCCCCccEEEEEEEcCCCCc-EEE-----EEC------CCccEEEEeCCCCCCEEEE
Confidence 45665544 444578999999875432 23567776543211 110 110 1122578999999999999
Q ss_pred EeCcC-----CceeeEEEECCCC
Q 045849 94 VVGIG-----HTERQFWFVTPPE 111 (320)
Q Consensus 94 ~v~~~-----~~s~~~~F~t~p~ 111 (320)
+|..- .......|+|.+.
T Consensus 75 ~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 75 TVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EEEEEETTEECCCEEEEEESCCC
T ss_pred EEEEEeCCCcCCCEEEEEEeCCC
Confidence 99652 1234567888754
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.009 Score=44.34 Aligned_cols=86 Identities=17% Similarity=0.134 Sum_probs=50.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC-----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG-----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|..+.+.... .+ ++|+|.-..... ...|+|.......+.... .... . ..-...++|++|+|+|.
T Consensus 10 ~P~~~~~~~~~--~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~---~~~~-~---~~~~~~~~i~~L~p~t~ 79 (122)
T 2e3v_A 10 SPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW---YDAK-E---ASMEGIVTIVGLKPETT 79 (122)
T ss_dssp CCEEEEEEECS--SC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEE---EEHH-H---HHTTTEEEECSCCTTCE
T ss_pred CCCccEEEecC--Cc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccce---eeee-e---cCccceEEeCCCCCCCE
Confidence 37666665543 45 999999764321 235666655432221110 0000 0 01123578999999999
Q ss_pred EEEEeCc------CCceeeEEEECCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|.+||.. +.+|....|+|.|.
T Consensus 80 Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 80 YAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred EEEEEEEEeCCccCCCcccccccccCC
Confidence 9999964 35677778887664
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0084 Score=43.17 Aligned_cols=84 Identities=14% Similarity=0.254 Sum_probs=49.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCC-CCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENS-EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
+|..+.+.- ...+++.|+|.-.... ....|.|..... ...... ... .-...+.|+||+|||.|.+
T Consensus 5 ~P~~l~v~~--~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~v~------~~~~~~~l~~L~p~t~Y~~ 71 (104)
T 2rb8_A 5 APSQIEVKD--VTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTI-----DLT------EDENQYSIGNLKPDTEYEV 71 (104)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE-----EEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCccEEEE--ecCCeEEEEEcCCCCccceEEEEEEECcCCCceEEE-----EcC------CCcCEEEeCCCCCCCEEEE
Confidence 677776653 4568999999875422 235677765432 111111 010 1122468999999999999
Q ss_pred EeCcC-----CceeeEEEECCCCC
Q 045849 94 VVGIG-----HTERQFWFVTPPEV 112 (320)
Q Consensus 94 ~v~~~-----~~s~~~~F~t~p~~ 112 (320)
+|..- +......|+|.+..
T Consensus 72 ~V~A~~~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 72 SLISRRGDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp EEEEEETTEECCCEEEEEECCC--
T ss_pred EEEEEeCCccCCCEEEEEECCCCc
Confidence 99642 22345678886643
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0066 Score=44.61 Aligned_cols=90 Identities=14% Similarity=0.086 Sum_probs=51.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCc----eEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQK----EQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
..|.+++++ +.+.+|++|+|...... ....|+|........ ........... .-...++|+||+|+|
T Consensus 10 p~p~~L~v~--~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~------~~~t~~~l~gL~PgT 81 (112)
T 2cui_A 10 PRLSQLSVT--DVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVP------GTRHSAVLRDLRSGT 81 (112)
T ss_dssp CCCCCCEEE--SCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEE------TTCCEEEECSCCTTC
T ss_pred CCCCceEEE--eecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEEcC------CCcCEEEeCCCCCCC
Confidence 355555554 45578999999876432 356788876543100 00000001111 112268899999999
Q ss_pred EEEEEeCc---CCce--eeEEEECCCCC
Q 045849 90 KYYYVVGI---GHTE--RQFWFVTPPEV 112 (320)
Q Consensus 90 ~Y~Y~v~~---~~~s--~~~~F~t~p~~ 112 (320)
.|..+|.. +..+ -....+|.+.+
T Consensus 82 ~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 82 LYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred EEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 99999964 2233 35567776644
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.02 Score=42.41 Aligned_cols=87 Identities=10% Similarity=0.055 Sum_probs=50.4
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeC--CCCCC----CeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTV--DEPGT----NTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~--~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+.+... ...+++.|+|.-. ..... ..|+|........ ......... -...+.|++|+|++
T Consensus 21 ~P~~~~~~~~-~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~----~~~~~~~~~-----~~~~~~l~~L~p~t 90 (124)
T 2dbj_A 21 APLNVTVFLN-ESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGIS----KELLEEVGQ-----NGSRARISVQVHNA 90 (124)
T ss_dssp CCEEEEEEEC-SSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEE----EEEEEEEES-----TTSCEEEECCCSSS
T ss_pred CCcceEEEec-CCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCc----cceEEEeCC-----CcceEEecCCCCCC
Confidence 5666666532 3358999999987 32222 2444432211100 110000000 11256799999999
Q ss_pred EEEEEeCc------CCceeeEEEECCCCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p~~ 112 (320)
.|.+||.. +.+|....|+|++..
T Consensus 91 ~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 91 TCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp EEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 99999964 457888999997653
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=96.68 E-value=0.017 Score=49.40 Aligned_cols=105 Identities=16% Similarity=0.087 Sum_probs=59.3
Q ss_pred cccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCC-CCCCeEEEeccCCCC-ceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 7 VFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDE-PGTNTVVYWSENSEQ-KEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 7 ~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
..++++...+|..+.+.... .+++.|+|...+. .....|+|....... .... .. ..-...+.|++
T Consensus 14 ~~~~~~~p~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~~i~~ 80 (290)
T 3r8q_A 14 VLFQGPAIPAPTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI-----NL------APDSSSVVVSG 80 (290)
T ss_dssp ------CCCCCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE-----EE------CTTCCEEEECS
T ss_pred EEeeCCCCCCCCceEEEECC--CCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE-----Ec------CCCccEEEeCC
Confidence 34555656788888876544 5799999998753 234567777654321 1111 11 01123577999
Q ss_pred CCCCCEEEEEeCcC------CceeeEEEECCCCCCCCCCeEEEEEEc
Q 045849 85 LEFNTKYYYVVGIG------HTERQFWFVTPPEVGPDVPYSFGLIGD 125 (320)
Q Consensus 85 L~p~t~Y~Y~v~~~------~~s~~~~F~t~p~~~~~~~~~f~~~gD 125 (320)
|+|++.|.++|..- ..+ ...++|.+.+.....+++...++
T Consensus 81 L~p~t~Y~~~V~a~~~~g~s~~s-~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 81 LMVATKYEVSVYALKDTLTSRPA-QGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp CCSSCEEEEEEEEEETTEECCCE-EEEEECCCCCCCCEEEEEEEECS
T ss_pred CCCCCEEEEEEEEEeCCCCCCCc-ceeEecCCCCCCCceeEEEEcCC
Confidence 99999999999652 223 45677765443333444444343
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.023 Score=45.96 Aligned_cols=98 Identities=13% Similarity=0.141 Sum_probs=53.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.|..+.+. ....++++|+|...... ....|+|...++...... . ... .-.....|++|+|+|.|.+
T Consensus 25 ~P~~l~~~--~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~-~---~~~------~~~~~~~i~~L~p~t~Y~~ 92 (203)
T 2gee_A 25 QPTDLSFV--DITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFE-D---FVD------SSVGYYTVTGLEPGIDYDI 92 (203)
T ss_dssp CCEEEEEE--CCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEE-E---EEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCccEEE--ecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCcee-E---EcC------CCccEEEeCCCCCCCEEEE
Confidence 56555544 44568999999987532 245677776543321111 0 000 0122467999999999999
Q ss_pred EeCcC---CceeeEEEECCCCCCCCCCeEEEEEEc
Q 045849 94 VVGIG---HTERQFWFVTPPEVGPDVPYSFGLIGD 125 (320)
Q Consensus 94 ~v~~~---~~s~~~~F~t~p~~~~~~~~~f~~~gD 125 (320)
+|..- +.+....+.+...+.+...+++...++
T Consensus 93 ~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 93 SVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred EEEEEeCCCccccEeeeecCCCcCCCceEEEEcCC
Confidence 99652 334444444432222223455554444
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.005 Score=45.62 Aligned_cols=88 Identities=26% Similarity=0.385 Sum_probs=52.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC------CCCCeEEEeccCCCCc---eEEEEEEEEEEeccccceEEEEEEecCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE------PGTNTVVYWSENSEQK---EQAEGKVYTYKYYNYTSGYIHHCTIRHLE 86 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 86 (320)
.|..+.+..-. ++++.|+|.-... .....|+|........ .........+. .-...+.|++|+
T Consensus 17 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~L~ 88 (125)
T 1uen_A 17 APGNVRVNVVN--STLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ------GSKTHGMLPGLE 88 (125)
T ss_dssp CCSSCEEEEEE--TTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE------SSCSEEEEESCC
T ss_pred CCceeEEEecC--CcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEec------CCccEEEeCCCC
Confidence 67788776543 5799999987531 1124566665543211 00001111111 112357899999
Q ss_pred CCCEEEEEeCc------CCceeeEEEECCCC
Q 045849 87 FNTKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 87 p~t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|+|.|.++|.. +.+|....|+|.+.
T Consensus 89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 99999999964 24677788998654
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0038 Score=45.94 Aligned_cols=82 Identities=21% Similarity=0.266 Sum_probs=49.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCC----CeEEEeccCCCC---ceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGT----NTVVYWSENSEQ---KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
.|..+.+. ....+++.|+|........ ..|+|....... ..... ..-...+.|++|+|+
T Consensus 21 ~P~~l~~~--~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~------------~~~~~~~~i~~L~p~ 86 (121)
T 2dlh_A 21 APRDVQAR--MLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHN------------VADSQITTIGNLVPQ 86 (121)
T ss_dssp CCEEEEEC--CCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCCC------------CSSCSEECCBSCCSS
T ss_pred CCcccEEE--ecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEEe------------cCCceEEEecCCCCC
Confidence 56555544 3456899999998743332 334444332210 00000 011234689999999
Q ss_pred CEEEEEeCc------CCceeeEEEECCCC
Q 045849 89 TKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 89 t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|.|.+||.. +.+|+...|+|.+.
T Consensus 87 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 87 KTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp CEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred CEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 999999964 35777889999654
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0079 Score=42.84 Aligned_cols=69 Identities=16% Similarity=0.265 Sum_probs=42.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCC-CceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSE-QKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
+|..+.++ +..+++++|+|...... ....|+|...... .... .... .-.-.+.|+||+|+|.|.+
T Consensus 4 ~P~~l~v~--~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~-----~~~~------~~~t~~~l~gL~P~t~Y~~ 70 (98)
T 3tes_A 4 APKNLVVS--EVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAIN-----LTVP------GSERSYDLTGLKPGTEYTV 70 (98)
T ss_dssp CCEEEEEE--SCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEE-----EEEE------TTCSEEEECSCCTTCEEEE
T ss_pred CCCceEEE--ecCCCeEEEEecCCcCccceEEEEEEECCCCCceEE-----EEcC------CCcCEEEECCCCCCCEEEE
Confidence 45555554 45678999999976532 2356778765421 1111 1111 0112578999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 71 ~V~A 74 (98)
T 3tes_A 71 SIYG 74 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0051 Score=45.01 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=41.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCC-CceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSE-QKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+... ..++++|.|....... ...|+|...... .+..+. . . .......|++|+|++.
T Consensus 18 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~-~------~~~~~~~i~~L~p~t~ 84 (117)
T 1uem_A 18 PPSKPQVTDV--TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA----N-H------VKTTLYTVRGLRPNTI 84 (117)
T ss_dssp CCCCCEEEEE--CSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE----E-E------ECSSEEEECSCCTTCE
T ss_pred CCCCCEEEEe--cCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc----c-c------cCcCEEEECCCCCCCE
Confidence 6777777643 3579999998764222 245666544211 111110 0 0 0112468999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.|||..
T Consensus 85 Y~frV~A 91 (117)
T 1uem_A 85 YLFMVRA 91 (117)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.027 Score=45.60 Aligned_cols=86 Identities=14% Similarity=0.029 Sum_probs=52.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC-----CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE-----PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+.... . +++|+|..... .....|+|.......+....- .. ..........|++|+|+|.
T Consensus 11 ~P~~~~~~~~~--~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~i~~L~p~t~ 80 (209)
T 2vkw_A 11 SPSIDQVEPYS--S-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY-----DA--KEASMEGIVTIVGLKPETT 80 (209)
T ss_dssp CCEEEEEEECS--S-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEE-----EH--HHHHHHSEEEECCCCTTCE
T ss_pred CCcccEeeecc--C-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEe-----ec--cCCCccceEEeCCCCCCCe
Confidence 58777776543 2 69999998631 223457777655433322110 00 0001122577999999999
Q ss_pred EEEEeCc------CCceeeEEEECCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|.|||.. +.++....|+|.+.
T Consensus 81 Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 81 YAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred EEEEEEEEcCCcccCCcccccccccCC
Confidence 9999964 24566777888764
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.022 Score=47.14 Aligned_cols=83 Identities=17% Similarity=0.228 Sum_probs=53.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCC-CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDE-PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+.+.... +++++|+|.-... .....|+|....+.......-. .....+.|++|+|+|.|.+
T Consensus 7 ~~P~~l~~~~~~--~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 73 (234)
T 3f7q_A 7 GAPQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEM 73 (234)
T ss_dssp CCCEEEEEEECS--SSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEE
T ss_pred CCCcceEEEEcC--CCEEEEEEECCCCccceEEEEEEECCCCccceEEEc-----------CCccEEEECCCCCCCEEEE
Confidence 478888776543 5799999998642 2335677776543221111000 0122477999999999999
Q ss_pred EeCc------CCceeeEEEECCC
Q 045849 94 VVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 94 ~v~~------~~~s~~~~F~t~p 110 (320)
+|.. +.++....++|..
T Consensus 74 ~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 74 KVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp EEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEeCCCcCCCCCeEEEEcCC
Confidence 9964 2456677888864
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.016 Score=47.09 Aligned_cols=83 Identities=13% Similarity=0.104 Sum_probs=54.7
Q ss_pred CCCccEEEEeeC--CCCCcEEEEEEeCCCCC--------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 15 NAPQQVHITQGD--LVGKAVIVSWVTVDEPG--------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 15 ~~p~~v~l~~~~--~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
..|..+.+.... ...+++.|+|....... ...|+|....+..+.... . .......|.+
T Consensus 104 ~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~------~------~~~~~~~l~~ 171 (210)
T 3n06_B 104 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------A------GQQTEFKILS 171 (210)
T ss_dssp CCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEE------E------ETCSEEEECC
T ss_pred CCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEe------c------cCceEEEEec
Confidence 478888887653 33589999999864321 245667665443332210 0 0112467999
Q ss_pred CCCCCEEEEEeCc-------CCceeeEEEECC
Q 045849 85 LEFNTKYYYVVGI-------GHTERQFWFVTP 109 (320)
Q Consensus 85 L~p~t~Y~Y~v~~-------~~~s~~~~F~t~ 109 (320)
|+|++.|..||.. +.||+...|+|+
T Consensus 172 L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp 203 (210)
T 3n06_B 172 LHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 203 (210)
T ss_dssp CCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred cCCCCEEEEEEEEecCCCcccCCCCceeEECc
Confidence 9999999999963 357889999995
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.02 Score=39.57 Aligned_cols=66 Identities=23% Similarity=0.336 Sum_probs=39.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
.+|..+.+..-. .+++.++|..... ......|....+. ... +.. .. -...+++|+||+.|+|+
T Consensus 5 ~~P~~l~~~~~~--~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~~~--~~~---------~~--~~~~~~~L~~~t~Y~~~ 67 (88)
T 1k85_A 5 TAPTNLASTAQT--TSSITLSWTASTD-NVGVTGYDVYNGT-ALA--TTV---------TG--TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CSSEEEEEEEESS-SEE--EEE---------SS--SEEEECCCCSSCEEEEE
T ss_pred CCCCccEEEecc--CCEEEEEECCCCC-CCCccEEEEEECC-EEE--eec---------CC--CEEEeCCCCCCCEEEEE
Confidence 367777666543 5799999987642 2234455443211 111 110 01 13568999999999999
Q ss_pred eCc
Q 045849 95 VGI 97 (320)
Q Consensus 95 v~~ 97 (320)
|..
T Consensus 68 V~A 70 (88)
T 1k85_A 68 VKA 70 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0054 Score=50.08 Aligned_cols=88 Identities=14% Similarity=0.220 Sum_probs=52.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+.+.......+++.|+|....... ...|+|.......+..+... ..........|++|+|+|.
T Consensus 105 ~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~ 176 (215)
T 1bqu_A 105 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 176 (215)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSEE
T ss_pred CCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCCCE
Confidence 36777777654334689999999764221 24666766543222211000 0011123577999999999
Q ss_pred EEEEeCc------C---CceeeEEEECCC
Q 045849 91 YYYVVGI------G---HTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~------~---~~s~~~~F~t~p 110 (320)
|.+||.. | .||....++|.+
T Consensus 177 Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 177 YVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEccCCCCCccCCCCCcccccccc
Confidence 9999964 2 256777888865
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.016 Score=43.27 Aligned_cols=86 Identities=24% Similarity=0.247 Sum_probs=50.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeC--CCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTV--DEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~--~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+.+.. ...+++.|+|... .... ...|+|........... .... .......++|++|+|+|
T Consensus 21 ~P~~l~~~~--~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~------~~~~~~~~~i~~L~p~t 90 (134)
T 2edx_A 21 PPQKVMCVS--MGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH--VVDG------ISREHSSWDLVGLEKWT 90 (134)
T ss_dssp CSEEEEEEC--SSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE--EECC------CBTTCSEEEEESCCTTC
T ss_pred CCcccEEEe--CCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE--EEEe------eCCCccEEEeCCCCCCC
Confidence 455665543 4468999999987 2222 23455554432211000 0000 01112357899999999
Q ss_pred EEEEEeCc------CCceeeEEEECCCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.|.+||.. +.+|....|+|.+.
T Consensus 91 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 91 EYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp EEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 99999964 35677788888654
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0079 Score=44.42 Aligned_cols=71 Identities=21% Similarity=0.210 Sum_probs=45.4
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
..|..+.+.--. .++++|.|.-.... ....|+|.......+..+... .....+.|++|+|++
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~-----------~~~~~~~v~~L~p~t 85 (120)
T 2yux_A 19 GPPQIVKIEDVW--GENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEH-----------YHRTSATITELVIGN 85 (120)
T ss_dssp CCCSCEEEEEEE--TTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESS-----------CCSSCCEECCCCSSE
T ss_pred CcCCCCEEEEec--CCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeec-----------CCcCEEEECCCCCCC
Confidence 378887776433 47999999875422 236788876654333322100 012235789999999
Q ss_pred EEEEEeCcC
Q 045849 90 KYYYVVGIG 98 (320)
Q Consensus 90 ~Y~Y~v~~~ 98 (320)
.|.|||..-
T Consensus 86 ~Y~frV~A~ 94 (120)
T 2yux_A 86 EYYFRVFSE 94 (120)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEEEe
Confidence 999999763
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.021 Score=42.36 Aligned_cols=88 Identities=10% Similarity=-0.005 Sum_probs=49.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEecc---CCCCceEEEEEEEEEEeccccceEEEEEEecCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSE---NSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 87 (320)
..|..+.+. +...++++|.|.-..... ...|+|... ....+..+.-. . .......++|++|+|
T Consensus 19 ~~P~~l~~~--~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~----~----~~~~~~~~~v~~L~p 88 (124)
T 1wis_A 19 GPPTNLGIS--NIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL----S----NEPDARSMEVPDLNP 88 (124)
T ss_dssp CCCEEEEEE--SCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE----E----SCTTCSEEEECSCCT
T ss_pred ccCCCCEEE--EecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE----c----cCCCceEEEeCCCCC
Confidence 367666654 345689999996543222 356677652 22223221110 0 001123578999999
Q ss_pred CCEEEEEeCc------CCcee-eEEEECCCCC
Q 045849 88 NTKYYYVVGI------GHTER-QFWFVTPPEV 112 (320)
Q Consensus 88 ~t~Y~Y~v~~------~~~s~-~~~F~t~p~~ 112 (320)
++.|.|||.. +..|. ...++|.+.+
T Consensus 89 ~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 89 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp TSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 9999999964 22343 2457776543
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.018 Score=41.55 Aligned_cols=70 Identities=19% Similarity=0.252 Sum_probs=40.4
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccC-CCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSEN-SEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+..+... ..+++.|+|...... .....|.... +...... +... . ... ...++|+||++|+|
T Consensus 6 ~aP~~l~a~~~~-~~~~v~LsW~~~~~~-~~Y~VyR~~~~~~~~~~i-~~~~--~----~ts----y~d~~l~~g~~Y~Y 72 (103)
T 3mpc_A 6 AFPTGLSAVLDS-SGNTANLTWNAAPGA-NSYNVKRSTKSGGPYTTI-ATNI--T----STN----YTDTGVATGTKYYY 72 (103)
T ss_dssp CCCEEEEEEECT-TSCCEEEEEECCTTC-SEEEEEEESSTTCCCEEE-EEEE--C----SSE----EEETTCCTTCCCEE
T ss_pred CCCceeEEEEeC-CCCEEEEEEECCCCC-CEEEEEEecCCCCCcEEE-eecC--C----CCE----EEECCCCCCCEEEE
Confidence 378887777643 247899999986543 3333344332 2111111 1100 0 111 34589999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 73 ~V~A 76 (103)
T 3mpc_A 73 VVSA 76 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.014 Score=43.39 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=47.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCC----CeEEEeccCC--CCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGT----NTVVYWSENS--EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+.+.. ...++++|+|.-...... ..|+|..... ..+.... ... .... + .+.+|+|+|
T Consensus 19 ~P~~~~~~~--~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~----~~~----~~~~-~--~i~~L~p~t 85 (127)
T 1uey_A 19 PPFDLELTD--QLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT----EVS----GTQT-T--AQLNLSPYV 85 (127)
T ss_dssp CCEEEEEEC--CSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE----EEE----SSCC-E--EEECCCTTC
T ss_pred CCCCcEEEE--ccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEe----eeC----CCce-E--EEecCCCCC
Confidence 787776654 346899999996543332 3455654321 1121111 110 0111 1 366999999
Q ss_pred EEEEEeCc------CCceee-EEEECCCC
Q 045849 90 KYYYVVGI------GHTERQ-FWFVTPPE 111 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~-~~F~t~p~ 111 (320)
.|.|||.. +.+|.. ..|+|.+.
T Consensus 86 ~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 86 NYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp EECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEEEEEEEEeCCccCCccccccceEcCCC
Confidence 99999964 234544 46788654
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.014 Score=41.70 Aligned_cols=69 Identities=14% Similarity=0.163 Sum_probs=43.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC---CCCCeEEEeccCCC-CceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE---PGTNTVVYWSENSE-QKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~---~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+++.-- ..+++.|+|.-... .....|+|...... ..... ... .-...++|+||+|||.|
T Consensus 7 ~P~~l~v~~~--t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~-----~v~------~~~t~~~l~~L~p~t~Y 73 (101)
T 3k2m_C 7 VPTKLEVVAA--TPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEF-----TVP------YSSSTATISGLSPGVDY 73 (101)
T ss_dssp SSCEEEEEEE--ETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEE-----EEE------TTCCEEEECSCCTTCEE
T ss_pred CCcceEEeec--CCCEEEEEecCCCCCCceeeEEEEEEECCCCCccEEE-----EcC------CCccEEEECCCCCCCEE
Confidence 6777877643 35899999997641 12346778765432 11111 111 01235789999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.++|..
T Consensus 74 ~~~V~A 79 (101)
T 3k2m_C 74 TITVYA 79 (101)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0098 Score=41.27 Aligned_cols=87 Identities=21% Similarity=0.250 Sum_probs=53.1
Q ss_pred CCCCCCCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCC-CceEEEEEEEEEEeccccceEEEEEEecCCCC
Q 045849 11 PPGYNAPQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSE-QKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 11 ~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 87 (320)
|+|..-|.|+.++....-.++--|.|..++.. ....+.|...... .+..+. -+.....-+|+||+|
T Consensus 2 ~~~~~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~-----------Ip~h~nSYtI~GL~P 70 (98)
T 1oww_A 2 PLGSSGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKP 70 (98)
T ss_dssp ----CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----------ECSSCCEEEECSCCS
T ss_pred CCCCCcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEE-----------ecCccceEEEecCCC
Confidence 55666788888876655578999999997633 2345566655432 122211 012333456999999
Q ss_pred CCEEEEEeCcC---Ccee--eEEEEC
Q 045849 88 NTKYYYVVGIG---HTER--QFWFVT 108 (320)
Q Consensus 88 ~t~Y~Y~v~~~---~~s~--~~~F~t 108 (320)
|..|.=++.+- +|++ .+.|.|
T Consensus 71 ~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 71 GVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp SEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred CcEEEEEEEEeeccCcccceEEEEEe
Confidence 99999888762 4543 566666
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0087 Score=51.79 Aligned_cols=88 Identities=14% Similarity=0.239 Sum_probs=55.0
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+.+...+...+++.|+|....... ...|+|.......+..+... + ...-.....|++|+|+|.
T Consensus 201 ~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~-------~-~~~~~~~~~l~~L~p~t~ 272 (303)
T 1i1r_A 201 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE-------D-TASTRSSFTVQDLKPFTE 272 (303)
T ss_dssp CCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG-------G-GCSCCSEEEECSCCTTCE
T ss_pred CCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc-------c-CCCceeEEEeCCCCCCCE
Confidence 36777777654445689999999764321 34677776543333221100 0 011123577999999999
Q ss_pred EEEEeCc------C---CceeeEEEECCC
Q 045849 91 YYYVVGI------G---HTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~------~---~~s~~~~F~t~p 110 (320)
|.+||.. | .||+...|+|..
T Consensus 273 Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 273 YVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 9999964 2 367888899964
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.011 Score=48.16 Aligned_cols=87 Identities=21% Similarity=0.355 Sum_probs=53.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+.+...+...+++.|+|.-.... ..-.|+|........... ...... .-...+.|++|+|++.|
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~~------~~~~~~~i~~L~p~t~Y 179 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPVV------GNRLTHQIQELTLDTPY 179 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGS--EEEEEE------SSCSEEEECCCCTTCEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCce--EEEEec------CCeeEEEEcCCCCCCEE
Confidence 677788776643358999999976432 234667765543211100 000000 11235779999999999
Q ss_pred EEEeCc------CCceeeEEEECCC
Q 045849 92 YYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t~p 110 (320)
.++|.. |.+|+...|+|..
T Consensus 180 ~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 180 YFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEEEEEEcCCccCCCCCCEEccCcc
Confidence 999964 4577888888854
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.012 Score=42.58 Aligned_cols=71 Identities=20% Similarity=0.224 Sum_probs=42.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC-----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG-----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
..|..+.+.- ...++++|+|.-..... ...|+|.......+..+.. ........+|++|+|++
T Consensus 9 ~~P~~l~~~~--~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t 76 (110)
T 2yuw_A 9 SPPTLLTVDS--VTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANK----------DLIDKTKFTITGLPTDA 76 (110)
T ss_dssp CCCEEEEEEE--ECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCS----------SCCCSSEEEECSCCTTC
T ss_pred CCCCccEEEe--ccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEecc----------ccCccCEEEECCCCCCC
Confidence 3676666653 33589999999764221 2345665544322211100 00112346789999999
Q ss_pred EEEEEeCc
Q 045849 90 KYYYVVGI 97 (320)
Q Consensus 90 ~Y~Y~v~~ 97 (320)
.|.|||..
T Consensus 77 ~Y~frV~A 84 (110)
T 2yuw_A 77 KIFVRVKA 84 (110)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=96.32 E-value=0.024 Score=46.04 Aligned_cols=83 Identities=16% Similarity=0.108 Sum_probs=49.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCC-----CCCCCeEEEeccCC-CCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVD-----EPGTNTVVYWSENS-EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~-----~~~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..+ .......+++.|+|.... ....-.|+|..... ..+.... .. ..-....+|++|+|++
T Consensus 118 ~P~~~--~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~-----~~~~~~~~i~~L~p~t 185 (214)
T 2ibg_A 118 VPELL--EIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT-----IE-----GAHARSFKIAPLETAT 185 (214)
T ss_dssp CCEEC--CCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE-----EE-----CTTCCEEEECSCCTTC
T ss_pred CCccc--EEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEee-----cc-----CCcceEEEeCCCCCCC
Confidence 35443 333445689999999863 11234677766543 1221111 00 0001246799999999
Q ss_pred EEEEEeCc------CCceeeEEEECCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
.|.|||.. +.+|....++|..
T Consensus 186 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 186 MYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcceEeeEecC
Confidence 99999964 3467788888864
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.012 Score=43.15 Aligned_cols=70 Identities=13% Similarity=0.048 Sum_probs=41.4
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCC-C----CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVD-E----PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~-~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|....+.-- ..++++|+|.... . .....|+|...++..+..+... .......+++||+||+.
T Consensus 13 ~P~~P~v~~v--~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~----------~~~~~~~~v~~L~p~t~ 80 (112)
T 1bpv_A 13 PPGKPVPLNI--TRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS----------NILENEFTVSGLTEDAA 80 (112)
T ss_dssp CCCCCEEEEE--ETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS----------CCCSSEEEECSCCSSCC
T ss_pred CCCCCEEEEe--eCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc----------cCccCEEEECCCCCCCE
Confidence 3444444422 3589999999432 1 2346788877654333322100 00112367899999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.|||..
T Consensus 81 Y~frV~A 87 (112)
T 1bpv_A 81 YEFRVIA 87 (112)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999965
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.039 Score=40.44 Aligned_cols=70 Identities=16% Similarity=0.270 Sum_probs=35.9
Q ss_pred CCCCcEEEEEEeCCCCCCC----eEEEecc-CCCCceEEEEEEEEEEec--cccceEEEEEEecCCCCCCEEEEEeCc
Q 045849 27 LVGKAVIVSWVTVDEPGTN----TVVYWSE-NSEQKEQAEGKVYTYKYY--NYTSGYIHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 27 ~~~~~~~v~W~t~~~~~~~----~v~y~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
...++++|.|.-....+.+ .|+|... ....+..+... ..+... .....-...++|++|+|++.|.+||..
T Consensus 14 ~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~-~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 14 LSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDN-IPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp CC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEE-EECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred EeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECccc-ccccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence 4568999999986544333 4556554 22233322211 110000 000122346789999999999999965
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.014 Score=42.94 Aligned_cols=70 Identities=19% Similarity=0.332 Sum_probs=44.3
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
.|..+.+.-- ..+++.|+|...... ....|.|.......... . .... .-...++|+||+|+|.|.++
T Consensus 6 ~P~~L~v~~~--t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~-~~v~------~~~ts~~l~gL~P~T~Y~v~ 73 (114)
T 3qwq_B 6 VPRDLEVVAA--TPTSLLISWDSGRGSYQYYRITYGETGGNSPVQ---E-FTVP------GPVHTATISGLKPGVDYTIT 73 (114)
T ss_dssp CCEEEEEEEE--ETTEEEEEEECCSCCCSEEEEEEEESSCSSCCE---E-EEEE------TTCCEEEECSCCTTCEEEEE
T ss_pred CCCceEEEec--CCCEEEEEEcCCcCcccEEEEEEEECCCCCccE---E-EEeC------CCcCEEEeCCCCCCCEEEEE
Confidence 6777777653 358999999986432 34567887654321100 0 0111 11235789999999999999
Q ss_pred eCc
Q 045849 95 VGI 97 (320)
Q Consensus 95 v~~ 97 (320)
|..
T Consensus 74 V~A 76 (114)
T 3qwq_B 74 VYA 76 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.024 Score=40.77 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=49.7
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
..|..+.+. +...+++.|+|.-.... ....|+|..... ..... .. ..-...+.|++|+|+|.|.+
T Consensus 9 ~~P~~l~v~--~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~-~~~~~-----~~------~~~~ts~~l~~L~p~t~Y~~ 74 (105)
T 2cum_A 9 EAPRDLEAK--EVTPRTALLTWTEPPVRPAGYLLSFHTPGG-QTQEI-----LL------PGGITSHQLLGLFPSTSYNA 74 (105)
T ss_dssp CCCEEEEEE--SCCSSCEEEEEECCSSCCSEEEEEEECTTS-CEEEE-----EE------CSSCSEEEECSCCTTCEEEE
T ss_pred CCCCceEEE--eccCCEEEEEEcCCCCccceEEEEEEeCCC-ceEEE-----EE------CCCccEEEECCCCCCCEEEE
Confidence 367666554 44568999999875432 234677765432 11111 10 01123578999999999999
Q ss_pred EeCcC-----CceeeEEEECCC
Q 045849 94 VVGIG-----HTERQFWFVTPP 110 (320)
Q Consensus 94 ~v~~~-----~~s~~~~F~t~p 110 (320)
+|..- +......|+|..
T Consensus 75 ~V~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 75 RLQAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp EEEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEEeCCcccCCEEEEEEeCC
Confidence 99652 223456788854
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0099 Score=42.71 Aligned_cols=71 Identities=18% Similarity=0.311 Sum_probs=44.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCC----CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDE----PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+++.-- .++++.|+|.-... ...-.|+|.......... . .... .-...++|+||+|+|.
T Consensus 9 ~~P~~l~v~~~--t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~---~-~~v~------~~~ts~~l~~L~p~t~ 76 (103)
T 3t04_D 9 SVPTKLEVVDA--TPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ---E-FTVP------GYYSTATISGLKPGVD 76 (103)
T ss_dssp CCCCSCEEEEE--ETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE---E-EEEE------TTCCEEEECSCCTTCC
T ss_pred CCCceeEEEec--CCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE---E-EEcC------CCcCEEEeCCCCCCCE
Confidence 47888888643 35899999987652 223467787653211110 0 0110 1123578999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.++|..
T Consensus 77 Y~~~V~A 83 (103)
T 3t04_D 77 YTITVYA 83 (103)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999854
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.028 Score=44.59 Aligned_cols=84 Identities=13% Similarity=0.147 Sum_probs=48.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
..|..+.+.. ...+++.|+|.-.... ..-.|+|........... ... .-...+.|+||+|++.|.+
T Consensus 96 ~~P~~l~~~~--~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~~ 162 (186)
T 1qr4_A 96 GSPKGISFSD--ITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVV-----TVD------GSKTRTKLVKLVPGVDYNV 162 (186)
T ss_dssp CCCSCEEEES--CCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEE-----EEE------TTCCEEEECSCCSSCEEEE
T ss_pred CCCCccEEEE--eCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEE-----EcC------CCcCEEEEcCCCCCCEEEE
Confidence 4677666553 3458999999875432 345667766543211111 111 1123577999999999999
Q ss_pred EeCcC---C--ceeeEEEECCCC
Q 045849 94 VVGIG---H--TERQFWFVTPPE 111 (320)
Q Consensus 94 ~v~~~---~--~s~~~~F~t~p~ 111 (320)
+|..- + ......|+|.|.
T Consensus 163 ~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 163 NIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EEEEEETTEECCCEEEEEEC---
T ss_pred EEEEEcCCCcCcCEEEEEEecCC
Confidence 99752 2 234557788653
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=96.20 E-value=0.019 Score=46.84 Aligned_cols=86 Identities=9% Similarity=0.015 Sum_probs=52.6
Q ss_pred CCCccEEEEeeCC----CCCcEEEEEEeCCCCC----CCeEEEe-ccCCCCceEEEEEEEEEEeccccceEEEEEEecCC
Q 045849 15 NAPQQVHITQGDL----VGKAVIVSWVTVDEPG----TNTVVYW-SENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHL 85 (320)
Q Consensus 15 ~~p~~v~l~~~~~----~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 85 (320)
..|..+.+....+ ..+++.|+|......+ ...|+|. ...+..+..+.-. . .......|.+|
T Consensus 110 ~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~----~------~~~~~~~l~~L 179 (215)
T 1cd9_B 110 EPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL----P------SSKDQFELCGL 179 (215)
T ss_dssp CCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE----E------SCEEEEEECCC
T ss_pred CCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEecc----c------CcceEEEEcCC
Confidence 4677666554321 3688999998764221 3467777 4443333322110 0 11245789999
Q ss_pred CCCCEEEEEeCc------C---CceeeEEEECCC
Q 045849 86 EFNTKYYYVVGI------G---HTERQFWFVTPP 110 (320)
Q Consensus 86 ~p~t~Y~Y~v~~------~---~~s~~~~F~t~p 110 (320)
+|+|.|.+||.. | .||+...|+|..
T Consensus 180 ~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 180 HQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 999999999953 2 367888898864
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.015 Score=54.90 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=50.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCC-ceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQ-KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
..|..+.+ .....++++|+|....... ...|+|....... ..... .-...++|+||+|+|
T Consensus 442 ~~Ps~~~~--~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~v~-------------~~~ts~~l~gL~P~T 506 (536)
T 3fl7_A 442 TEPPKVRL--EGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRR-------------TEGFSVTLDDLAPDT 506 (536)
T ss_dssp CCCCEEEE--EECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEEEE-------------ESSSEEECCSCCSSC
T ss_pred cCCCCCce--eeccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEEEc-------------CCCCEEEECCCCCCC
Confidence 35766666 3334689999999764322 3467776654321 11111 111247799999999
Q ss_pred EEEEEeCc------CCceeeEEEECCCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.|.++|.. +.+|+...|+|.+.
T Consensus 507 ~Y~frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 507 TYLVQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEEEEEEEECC---CEECCCEEEECCC-
T ss_pred EEEEEEEEEcCCcccCCCCCEEEEeCCC
Confidence 99999964 34788899999764
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.015 Score=43.15 Aligned_cols=71 Identities=17% Similarity=0.273 Sum_probs=44.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCC-CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDE-PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+.+.-- ..+++.|+|.-... ...-.|.|.......... . .... .-...++|+||+|+|.|.+
T Consensus 30 ~~P~~l~v~~~--t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~---~-~~v~------~~~t~~~l~gL~P~t~Y~~ 97 (121)
T 2ocf_D 30 DVPTKLEVVAA--TPTSLLISWDAPAVTVRYYRITYGETGGNSPVQ---E-FTVP------GSKSTATISGLKPGVDYTI 97 (121)
T ss_dssp CSCEEEEEEEE--CSSCEEEEEECCSSCCCEEEEEEEETTTCSCBE---E-EEEE------TTCCEEEECCCCTTCEEEE
T ss_pred CCCCccEEEec--CCCEEEEEEcCCCCCCcEEEEEEEECCCCCccE---E-EEeC------CCcCEEEeCCCCCCCEEEE
Confidence 46877777653 35899999987642 223567777654321100 0 0110 0123578999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 98 ~V~A 101 (121)
T 2ocf_D 98 TVYA 101 (121)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0097 Score=43.17 Aligned_cols=70 Identities=20% Similarity=0.201 Sum_probs=42.3
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+..- ..++++|+|.-.... ....|+|.......+..... ...-....+|++|+|++.
T Consensus 11 ~P~~l~~~~~--~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t~ 78 (111)
T 1x5y_A 11 APQHLTVEDV--TDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGAR 78 (111)
T ss_dssp CCEEEEEEEE--CSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTCC
T ss_pred CCCCCEEEec--cCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc----------cCCcccEEEECCCCCCCE
Confidence 6766666543 358999999976422 23456666544322221100 001123467899999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.|||..
T Consensus 79 Y~frV~A 85 (111)
T 1x5y_A 79 ILFRVVG 85 (111)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.035 Score=44.10 Aligned_cols=69 Identities=13% Similarity=0.155 Sum_probs=43.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC-----CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE-----PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|..+.+.-- ..++++|+|..... ...-.|+|.......+...... .-.....|++|+|++.
T Consensus 8 ~P~~l~~~~~--~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~ 74 (197)
T 3lpw_A 8 PPQDLKVKEV--TKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGCS 74 (197)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTCE
T ss_pred CCCCcEEEEe--cCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCCE
Confidence 7777776643 35799999998632 1234677776554333222111 0112467999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.|+|..
T Consensus 75 Y~~~V~a 81 (197)
T 3lpw_A 75 YYFRVLA 81 (197)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.018 Score=42.24 Aligned_cols=73 Identities=12% Similarity=0.139 Sum_probs=42.7
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCCC----CeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPGT----NTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+.........++++|+|.-...... ..|+|.... ..+..... . .......++|++|+|++.
T Consensus 19 ~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~---~------~~~~~~~~~v~~L~p~t~ 88 (121)
T 1wf5_A 19 HAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLA---S------VDPKATSVTVKGLVPARS 88 (121)
T ss_dssp CCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEES---S------CCTTCCEEEEESCCTTCE
T ss_pred ccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEc---c------cCCCccEEEECCcCCCCE
Confidence 367777434444556899999986543332 345555443 12221100 0 011123478999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.|||..
T Consensus 89 Y~frV~A 95 (121)
T 1wf5_A 89 YQFRLCA 95 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.026 Score=46.82 Aligned_cols=86 Identities=19% Similarity=0.207 Sum_probs=55.3
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC------CCeEEEeccCC-CCceEEEEEEEEEEeccccceEEEEEEecCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG------TNTVVYWSENS-EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 87 (320)
..|..+.+..... .+++.|+|.....+. ...|+|....+ ..+..+.. ......+.+.+|+|
T Consensus 114 dPP~nLtv~~~~~-~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~-----------~~t~~~i~l~~L~P 181 (223)
T 3up1_A 114 EAPFDLSVVYREG-ANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNL-----------SSTKLTLLQRKLQP 181 (223)
T ss_dssp CCCEEEEEEEETT-TTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEE-----------SSSEEEEEGGGSCT
T ss_pred CCCcceEEEEEcC-CCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEe-----------cCceeEEeccccCC
Confidence 4788888887654 467999999874221 34577776532 22322110 11123456789999
Q ss_pred CCEEEEEeCc-------C---CceeeEEEECCCCC
Q 045849 88 NTKYYYVVGI-------G---HTERQFWFVTPPEV 112 (320)
Q Consensus 88 ~t~Y~Y~v~~-------~---~~s~~~~F~t~p~~ 112 (320)
+|.|..||.. + .||....|+|++..
T Consensus 182 gt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 182 AAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp TCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred CcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 9999999952 1 46788999997643
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.012 Score=41.69 Aligned_cols=70 Identities=16% Similarity=0.269 Sum_probs=44.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCC-ceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQ-KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
..|..+++.-- ..+++.|+|...... ....|.|....... .... ... .-...+.|+||+|+|.|.
T Consensus 6 ~~P~~l~v~~~--t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~v~------~~~t~~~l~~L~p~t~Y~ 72 (97)
T 3qht_C 6 SVPTKLEVVAA--TPTSLLISWDASSSSVSYYRITYGETGGNSPVQEF-----TVP------GSSSTATISGLSPGVDYT 72 (97)
T ss_dssp CSSSSCEEEEE--ETTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEE-----EEE------TTCCEEEECSCCTTCEEE
T ss_pred CCCCceEEEec--CCCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEE-----EeC------CCcCEEEeCCCCCCCEEE
Confidence 46888887654 358999999875422 23567787654321 1111 111 112357899999999999
Q ss_pred EEeCc
Q 045849 93 YVVGI 97 (320)
Q Consensus 93 Y~v~~ 97 (320)
++|..
T Consensus 73 v~V~A 77 (97)
T 3qht_C 73 ITVYA 77 (97)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.024 Score=39.64 Aligned_cols=71 Identities=15% Similarity=0.222 Sum_probs=43.3
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
..|..+++.--. .+++.|+|.-.... ..-.|+|...... ....... ...-...+.|+||+|||.|.+
T Consensus 3 ~~P~~l~~~~~~--~~si~lsW~~p~~~i~~Y~v~y~~~~~~-------~~~~~~~---~~~~~~~~~l~~L~p~t~Y~~ 70 (94)
T 1j8k_A 3 DRPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDG-------IHELFPA---PDGEEDTAELQGLRPGSEYTV 70 (94)
T ss_dssp CCCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTE-------EEEECCC---CCSSCCEEEECSCCCCSEEEE
T ss_pred CCCCccEEEeec--CCEEEEEEcCCCCCcceEEEEEEeCCCC-------CceEEec---CCCCccEEEeCCCCCCCEEEE
Confidence 467777777433 58999999765322 2356777654321 0000000 011133678999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 71 ~V~A 74 (94)
T 1j8k_A 71 SVVA 74 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.049 Score=46.50 Aligned_cols=103 Identities=17% Similarity=0.099 Sum_probs=59.2
Q ss_pred ccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCC-CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCC
Q 045849 8 FQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDE-PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLE 86 (320)
Q Consensus 8 ~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 86 (320)
+...++...|..+.+... ..++++|+|..... .....|+|.......... .... .......|++|+
T Consensus 107 ~~t~~~~~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~-----~~~~------~~~~~~~i~~L~ 173 (290)
T 3r8q_A 107 VTTLENVSPPRRARVTDA--TETTITISWRTKTETITGFQVDAVPANGQTPIQ-----RTIK------PDVRSYTITGLQ 173 (290)
T ss_dssp EECCCCCCCCEEEEEEEE--CSSCEEEEEECCSCCCCEEEEEEEESSSCCCEE-----EEEC------TTCSEEEECSCC
T ss_pred EecCCCCCCCceeEEEEc--CCCeEEEEEeCCCCcccEEEEEEEECCCCcceE-----EecC------CCccEEEECCCC
Confidence 344444457877777743 35899999998653 234567776554322111 0100 112246799999
Q ss_pred CCCEEEEEeCcC---Cce--eeEEEECCCCCCCCCCeEEEEEEc
Q 045849 87 FNTKYYYVVGIG---HTE--RQFWFVTPPEVGPDVPYSFGLIGD 125 (320)
Q Consensus 87 p~t~Y~Y~v~~~---~~s--~~~~F~t~p~~~~~~~~~f~~~gD 125 (320)
|++.|.++|..- +.+ ....+.|.|.+ ...+++...++
T Consensus 174 p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 215 (290)
T 3r8q_A 174 PGTDYKIYLYTLNDNARSSPVVIDASTAIDA--PSNLRFLATTP 215 (290)
T ss_dssp TTCEEEEEEEEEETTEECCCEEEEEECCCCC--CEEEEEEEEET
T ss_pred CCCEEEEEEEEEeCCcccCCEEEEecCCCCC--CCccEEEeeCC
Confidence 999999999642 222 34556676543 23455544443
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=95.84 E-value=0.038 Score=49.05 Aligned_cols=72 Identities=18% Similarity=0.257 Sum_probs=45.2
Q ss_pred CCCccEEEEeeCCCCC-cEEEEEEeCC--CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 15 NAPQQVHITQGDLVGK-AVIVSWVTVD--EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~-~~~v~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.+|..+.+.... .+ ++.|+|.-.. ......|+|.............. .. .-...+.|++|+|++.|
T Consensus 4 ~~P~~l~~~~~~--~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~---~~------~~~~~~~i~~L~p~t~Y 72 (375)
T 3t1w_A 4 SPPTNLHLEANP--DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---VH------ADQSSCTFDNLSPGLEY 72 (375)
T ss_dssp CCCEEEEEEEET--TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEE---EE------TTCCEEEECCCCTTCCE
T ss_pred CCCCccEEEecC--CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEE---cC------CCccEEEEcCCcCCCEE
Confidence 378788777643 46 9999999764 23345777776543211111111 00 11235679999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.++|..
T Consensus 73 ~~~V~a 78 (375)
T 3t1w_A 73 NVSVYT 78 (375)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=95.77 E-value=0.018 Score=46.55 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=42.4
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+++.-- +.+++.|+|...... ....|.|.......... .. ... .-...++|+||+|+|.|.+
T Consensus 105 ~~P~~l~v~~~--t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~---~~-~v~------~~~t~~~l~gL~p~t~Y~~ 172 (195)
T 2qbw_A 105 SVPTNLEVVAA--TPTSLLISWDASYYGVSYYRITYGETGGNSPVQ---EF-TVP------YSSSTATISGLKPGVDYTI 172 (195)
T ss_dssp CSSCCCEEEEE--ETTEEEEECCCCCSSCSEEEEEEEETTCCSCCE---EE-EEE------TTCSEEEECSCCTTCEEEE
T ss_pred CCCcccEEEeC--CCCEEEEEEeCCCCCccEEEEEEEECCCCCcce---EE-EeC------CCCCEEEeCCCCCCCEEEE
Confidence 35666666543 358999999776422 23567776554321010 00 000 0123578999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 173 ~V~A 176 (195)
T 2qbw_A 173 TVYA 176 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.04 Score=40.32 Aligned_cols=67 Identities=18% Similarity=0.299 Sum_probs=42.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+++.-- . +++.|+|.-.... ....|+|..... ..... ... .-....+|++|+|+|.|
T Consensus 20 ~P~~l~~~~~--~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~-----~~~------~~~~~~~l~~L~p~t~Y 84 (116)
T 2edb_A 20 QPSSLHVRPQ--T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETV-----RVD------SKQRYYSIERLESSSHY 84 (116)
T ss_dssp CCSCEEEEEC--S-SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEE-----EEE------TTCCEEEECSCCSSSBE
T ss_pred CCCCeEEEEC--C-CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEE-----EeC------CCeeEEEeCCCCCCCEE
Confidence 7888887754 3 7999999976432 234667764321 11110 110 11234779999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.++|..
T Consensus 85 ~~~V~A 90 (116)
T 2edb_A 85 VISLKA 90 (116)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.70 E-value=0.045 Score=44.10 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=48.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCC-CCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENS-EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+.. ..++++|+|.-..... ...|+|..... ..+....... . .... ...+ +|+|+|.
T Consensus 8 ~P~~~~~~~---~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~---~----~~~~--~~~~-~L~p~t~ 74 (205)
T 1cfb_A 8 APKLTGITC---QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---P----NTDS--SFVV-QMSPWAN 74 (205)
T ss_dssp CCEEEEEEE---CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE---E----TTCS--EEEE-ECCSSEE
T ss_pred CCCCcEEEe---cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeecc---C----CCce--EEEE-eCCCCCE
Confidence 788877776 4689999999763222 34677765432 1222221111 0 0111 2335 9999999
Q ss_pred EEEEeCc------CCce-eeEEEECCCC
Q 045849 91 YYYVVGI------GHTE-RQFWFVTPPE 111 (320)
Q Consensus 91 Y~Y~v~~------~~~s-~~~~F~t~p~ 111 (320)
|.|||.. +..+ ....++|.+.
T Consensus 75 Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 75 YTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 9999964 2344 3466777543
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.64 E-value=0.056 Score=39.44 Aligned_cols=70 Identities=13% Similarity=0.156 Sum_probs=41.3
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+++.. ...+++.|+|....... ...|+|........... ... ..-...+.|++|+|+|.|
T Consensus 20 ~P~~l~~~~--~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y 87 (119)
T 1wfn_A 20 PVGHLSFSE--ILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVT----HYL------PNVTLEYRVTGLTALTTY 87 (119)
T ss_dssp CCSCCEEES--CCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCC----EEE------CSSCCEEEEESCCTTCEE
T ss_pred CCCceEEEE--CCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEE----EEe------CCCceEEEEcCCCCCCEE
Confidence 566666554 34689999998764322 24566655432111000 000 111235778999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.+||..
T Consensus 88 ~~~V~A 93 (119)
T 1wfn_A 88 TIEVAA 93 (119)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=95.61 E-value=0.051 Score=44.70 Aligned_cols=87 Identities=17% Similarity=0.164 Sum_probs=54.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC------CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP------GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
..|..|++...+ .+++.|+|...... -...|+|....+. +...... .. ......+.|.+|.||
T Consensus 107 ~pP~~l~~~~~~--~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~~~--~~------~~~~~~~~l~~L~p~ 175 (214)
T 2b5i_B 107 MAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAPLL--TL------KQKQEWICLETLTPD 175 (214)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSCCE--EE------CSCCCEEEECSCCTT
T ss_pred CCCceEEEEEec--CCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheeeee--ee------cccceEEEeccCCCC
Confidence 467788887654 36899999987432 1356777665431 1111000 00 011235778999999
Q ss_pred CEEEEEeCc----------CCceeeEEEECCCCC
Q 045849 89 TKYYYVVGI----------GHTERQFWFVTPPEV 112 (320)
Q Consensus 89 t~Y~Y~v~~----------~~~s~~~~F~t~p~~ 112 (320)
|.|..||.. +.||....|+|.+..
T Consensus 176 t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 176 TQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred CEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 999999963 257888999998743
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.53 E-value=0.17 Score=42.81 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=55.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
..|..+.+.... .++++|+|.-.... ....|+|........... ... . ...-.....|++|+|++.|.+
T Consensus 106 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~--~-~~~~~~~~~i~~L~p~t~Y~~ 175 (283)
T 1tdq_A 106 DAPKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEV-----LVP--K-GIGPTTKTTLTDLVPGTEYGV 175 (283)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEE-----EEE--C-CSSSEEEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecC--CCeEEEEecCCCCCccEEEEEEEeCCCCcceEE-----ECC--C-CCcccceEEEecCCCCCEEEE
Confidence 367777765433 57999999987432 345677766543222111 100 0 000144678999999999999
Q ss_pred EeCcC---Cce--eeEEEECCCCCCCCCCeEEEEEE
Q 045849 94 VVGIG---HTE--RQFWFVTPPEVGPDVPYSFGLIG 124 (320)
Q Consensus 94 ~v~~~---~~s--~~~~F~t~p~~~~~~~~~f~~~g 124 (320)
+|..- +.+ ....+.|.|.+ ...+++...+
T Consensus 176 ~V~A~n~~g~s~~~~~~~~t~~~~--P~~l~~~~~~ 209 (283)
T 1tdq_A 176 GISAVMNSKQSIPATMNARTELDS--PRDLMVTASS 209 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCCC--CEEEEEEEEC
T ss_pred EEEEEeCCCCCcceEEEecCCCCC--CCccEEeEec
Confidence 99752 222 33455665432 2344444433
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.49 E-value=0.046 Score=47.37 Aligned_cols=87 Identities=9% Similarity=-0.028 Sum_probs=52.8
Q ss_pred CCCccEEEEeeCC----CCCcEEEEEEeCCCCC----CCeEEEe-ccCCCCceEEEEEEEEEEeccccceEEEEEEecCC
Q 045849 15 NAPQQVHITQGDL----VGKAVIVSWVTVDEPG----TNTVVYW-SENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHL 85 (320)
Q Consensus 15 ~~p~~v~l~~~~~----~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 85 (320)
..|..+.+..... ..+++.|+|......+ ...|+|. ..++..+..+... ........|.+|
T Consensus 204 ~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L 273 (313)
T 2d9q_B 204 EPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPL----------PLEALQYELCGL 273 (313)
T ss_dssp CCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEE----------CSCEEEEEECSC
T ss_pred CcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccc----------cCcceEEEEeCC
Confidence 3676665543221 3589999999864211 3567777 4443334332111 112346789999
Q ss_pred CCCCEEEEEeCc------C---CceeeEEEECCCC
Q 045849 86 EFNTKYYYVVGI------G---HTERQFWFVTPPE 111 (320)
Q Consensus 86 ~p~t~Y~Y~v~~------~---~~s~~~~F~t~p~ 111 (320)
+|+|.|.+||.. | .||+...|+|+..
T Consensus 274 ~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 274 LPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp CSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred CCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 999999999963 3 3677888888653
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.081 Score=41.86 Aligned_cols=69 Identities=16% Similarity=0.200 Sum_probs=44.0
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
..|..+.+.... .+++.|+|...... ....|+|...+...+...... -.....|++|+|++
T Consensus 104 ~~p~~~~~~~~~--~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~~~L~p~t 169 (197)
T 3lpw_A 104 LPPGKITLMDVT--RNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATV------------KVTEATITGLIQGE 169 (197)
T ss_dssp CCCSCEEEEEEC--SSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEEE------------SSSEEEECCCCTTC
T ss_pred CCCcccEEEecc--CCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeecc------------cccEEEeCCcCCCC
Confidence 477778766443 47999999976432 235667766544332221100 01236799999999
Q ss_pred EEEEEeCc
Q 045849 90 KYYYVVGI 97 (320)
Q Consensus 90 ~Y~Y~v~~ 97 (320)
.|.|+|..
T Consensus 170 ~Y~~~V~A 177 (197)
T 3lpw_A 170 EYSFRVSA 177 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=95.45 E-value=0.015 Score=48.70 Aligned_cols=83 Identities=13% Similarity=0.174 Sum_probs=51.8
Q ss_pred CCCccEEEEeeCCCC----CcEEEEEEeCCCC--------CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEe
Q 045849 15 NAPQQVHITQGDLVG----KAVIVSWVTVDEP--------GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTI 82 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~----~~~~v~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (320)
..|..|.+++..... .++.|+|...... -...|+|....+..+..... .-...+.|
T Consensus 132 ~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~~------------~~~~~~~l 199 (236)
T 1axi_B 132 DPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP------------ILTTSVPV 199 (236)
T ss_dssp CCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC------------BSSSEEEE
T ss_pred CCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEec------------cCCCEEEE
Confidence 367788766654322 3599999987422 12456666654332222110 01135778
Q ss_pred cCCCCCCEEEEEeCc--------CCceeeEEEECC
Q 045849 83 RHLEFNTKYYYVVGI--------GHTERQFWFVTP 109 (320)
Q Consensus 83 ~~L~p~t~Y~Y~v~~--------~~~s~~~~F~t~ 109 (320)
.+|+||+.|..||.. +.||+...|+|+
T Consensus 200 ~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 200 YSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred eccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 899999999999964 246778888875
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.43 E-value=0.14 Score=43.22 Aligned_cols=98 Identities=11% Similarity=0.162 Sum_probs=58.0
Q ss_pred CCCCccEEEEeeCCCCCcEEEEEEeCC-CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 14 YNAPQQVHITQGDLVGKAVIVSWVTVD-EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 14 ~~~p~~v~l~~~~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
..+|..+.+..-. .++++|+|.-.. ......|+|......... ..... ......+.|++|+|++.|.
T Consensus 15 p~~P~~l~~~~~~--~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~----~~~~~------~~~~~~~~i~~L~p~t~Y~ 82 (283)
T 1tdq_A 15 IDGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGK----TTFRL------QPPLSQYSVQALRPGSRYE 82 (283)
T ss_dssp SCCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCC----EEEEE------CTTCSEEEECSCCTTCEEE
T ss_pred CCCCcEEEEEecC--CCeEEEEEECCCCceeEEEEEEEEecCCCCc----EEEEe------CCCCCEEEecCCCCCCEEE
Confidence 3578888776543 479999999875 223457777644321111 00111 0112357799999999999
Q ss_pred EEeCcC---C--ceeeEEEECCCCCCCCCCeEEEEEEc
Q 045849 93 YVVGIG---H--TERQFWFVTPPEVGPDVPYSFGLIGD 125 (320)
Q Consensus 93 Y~v~~~---~--~s~~~~F~t~p~~~~~~~~~f~~~gD 125 (320)
++|..- + .+....|.|+|.+. ..+++...++
T Consensus 83 ~~V~a~~~~g~s~~~~~~~~t~p~~P--~~l~~~~~~~ 118 (283)
T 1tdq_A 83 VSISAVRGTNESDASSTQFTTEIDAP--KNLRVGSRTA 118 (283)
T ss_dssp EEEEEEETTEECCCEEEEEECCCCCC--EEEEEEEECS
T ss_pred EEEEEECCCCCCCCeeEEEECCCCCC--CceEEEecCC
Confidence 999752 1 23456778866442 3455544444
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=95.39 E-value=0.049 Score=48.14 Aligned_cols=73 Identities=18% Similarity=0.221 Sum_probs=45.0
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCC--CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVD--EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
.+|..+.+..... .+++.|+|.... ....-.|+|.............. . ......+.|++|+|++.|.
T Consensus 3 ~~P~~l~~~~~~~-~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~------~~~~~~~~i~~L~p~t~Y~ 72 (368)
T 1fnf_A 3 SPPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---V------HADQSSCTFDNLSPGLEYN 72 (368)
T ss_dssp CCCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---E------CTTCCEEECCCCCTTSCEE
T ss_pred CCCcceEEEecCC-CcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEEE---e------cCCcCEEEECCCCCCCEEE
Confidence 4788888875432 246999999864 22345777776543211111110 0 0112357899999999999
Q ss_pred EEeCc
Q 045849 93 YVVGI 97 (320)
Q Consensus 93 Y~v~~ 97 (320)
|+|..
T Consensus 73 ~~V~a 77 (368)
T 1fnf_A 73 VSVYT 77 (368)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.036 Score=49.30 Aligned_cols=74 Identities=23% Similarity=0.358 Sum_probs=42.6
Q ss_pred CCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc------
Q 045849 28 VGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI------ 97 (320)
Q Consensus 28 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~------ 97 (320)
..++++|+|.-..... ...|+|.......+... . .. ..-.....|++|+|++.|.+||..
T Consensus 305 ~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-~---~~------~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~ 374 (389)
T 2jll_A 305 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE-K---KV------QGNKDHIILEHLQWTMGYEVQITAANRLGY 374 (389)
T ss_dssp TTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBC-C---EE------CTTCCEEEECSCCTTCEEEEEEEEEC-CCB
T ss_pred cCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeE-e---ec------cCCcceEEeCCcCCCCEEEEEEEEEcCCcC
Confidence 4689999998654222 34566665332111100 0 00 011234678999999999999964
Q ss_pred CCceeeEEEECCCCC
Q 045849 98 GHTERQFWFVTPPEV 112 (320)
Q Consensus 98 ~~~s~~~~F~t~p~~ 112 (320)
+..|. ..|+|.+.|
T Consensus 375 s~~s~-~~~~T~~~P 388 (389)
T 2jll_A 375 SEPTV-YEFSMPPKP 388 (389)
T ss_dssp CCCEE-EEEECCCCC
T ss_pred CCcee-eEecCCCCC
Confidence 23444 489998765
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=95.26 E-value=0.051 Score=46.26 Aligned_cols=80 Identities=16% Similarity=0.256 Sum_probs=48.1
Q ss_pred CccEEEEeeCCCCCcEEEEEEeC-----C-CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 17 PQQVHITQGDLVGKAVIVSWVTV-----D-EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 17 p~~v~l~~~~~~~~~~~v~W~t~-----~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
|.++.+.. ...+++.|+|.-. . ....-.|+|....+. .... ... .-....+|++|+||+.
T Consensus 200 ~p~~~~~~--~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~-~~~~-----~~~------~~~~~~~~~~L~p~t~ 265 (290)
T 3l5i_A 200 GPTVRTKK--VGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN-ETAV-----NVD------SSHTEYTLSSLTSDTL 265 (290)
T ss_dssp CCCEEEEE--ECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC-CEEE-----EEE------TTCSEEEECSCCTTCE
T ss_pred CCeeeEee--ccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC-eEEE-----EeC------CCceEEEeCCCCCCCE
Confidence 33555532 3357999999832 1 122356777765432 1111 111 1122577999999999
Q ss_pred EEEEeCc-----CCceeeEEEECCC
Q 045849 91 YYYVVGI-----GHTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~-----~~~s~~~~F~t~p 110 (320)
|.++|.. +..|....|+|++
T Consensus 266 Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 266 YMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEEEeCCCCCCCCceEeecCC
Confidence 9999964 2367788999864
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=95.23 E-value=0.009 Score=42.46 Aligned_cols=61 Identities=18% Similarity=0.205 Sum_probs=39.4
Q ss_pred eeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCc---eEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc
Q 045849 24 QGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQK---EQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 24 ~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
..+.+++|+.|+|...... ..-.|+|........ ..+.| -...+.|+||.|||.|...|..
T Consensus 14 vt~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~~~~v~g-------------~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 14 VTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPS-------------TATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp CCCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCCEEEEEET-------------TCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcceEEECCC-------------CccEEEECCCCCCCEEEEEEEE
Confidence 3445678999999876532 346778877653211 11111 1235789999999999888864
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.045 Score=43.97 Aligned_cols=71 Identities=20% Similarity=0.211 Sum_probs=42.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCC--CCCCCeEEEeccCCC-CceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVD--EPGTNTVVYWSENSE-QKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~--~~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
.|.++.++--....+++.|+|.-.. ......|+|...... .+... ... .-...+.|+||+|+|.|.
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~ 70 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA-----TIP------GHLNSYTIKGLKPGVVYE 70 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEE-----EEC------TTCCEEEECSCCTTEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEE-----ecC------CCccEEEecCCCCCCEEE
Confidence 3556555432222689999999863 223456777754331 11111 110 011257899999999999
Q ss_pred EEeCc
Q 045849 93 YVVGI 97 (320)
Q Consensus 93 Y~v~~ 97 (320)
++|..
T Consensus 71 ~~V~a 75 (201)
T 2ha1_A 71 GQLIS 75 (201)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.19 E-value=0.09 Score=42.39 Aligned_cols=70 Identities=17% Similarity=0.170 Sum_probs=43.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC--CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE--PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.|..+.+..-. .+++.|+|.-... .....|+|.......... .... ..-...+.|+||+|+|.|.+
T Consensus 116 ~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 183 (203)
T 2gee_A 116 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA----ELSI------SPSDNAVVLTNLLPGTEYVV 183 (203)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCCSEEEEEEEETTCGGGCE----EEEE------CTTCCEEEECSCCTTCEEEE
T ss_pred CCCceEEEEcC--CCEEEEEEcCCCCCCccEEEEEEEECCCCCccE----EEEc------CCCcCEEEECCCCCCCEEEE
Confidence 67777765433 4899999998742 234567777643321111 0010 01123577999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 184 ~V~A 187 (203)
T 2gee_A 184 SVSS 187 (203)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=95.15 E-value=0.065 Score=43.37 Aligned_cols=80 Identities=15% Similarity=0.264 Sum_probs=43.0
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCC-CCceEEEEEEEEEEec--cccceEEEEEEecCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENS-EQKEQAEGKVYTYKYY--NYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~L~p 87 (320)
..|..+.+..- ..++++|+|.-....+ ...|+|...+. ..+....... .+... +....-...+.|++|+|
T Consensus 3 ~pP~~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p 79 (214)
T 2ibg_A 3 YPPTPPNVTRL--SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNI-PYGKPKWNSELGKSFTASVTDLKP 79 (214)
T ss_dssp CCCCCCEEEEE--ETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCE-ECCSSSCSSSSEEEEEEEECSCCT
T ss_pred CCCCCCEeeEe--cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCccccccc-CccccccccccCcceeEEecCCcC
Confidence 35556665543 3589999999764322 24556665432 1222211100 00000 00012344678999999
Q ss_pred CCEEEEEeCc
Q 045849 88 NTKYYYVVGI 97 (320)
Q Consensus 88 ~t~Y~Y~v~~ 97 (320)
+|.|.|||..
T Consensus 80 ~t~Y~~~V~A 89 (214)
T 2ibg_A 80 QHTYRFRILA 89 (214)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999964
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.12 E-value=0.093 Score=42.41 Aligned_cols=88 Identities=16% Similarity=0.102 Sum_probs=50.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC-CCCC----eEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE-PGTN----TVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~-~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+... ..++++.|..... .+.+ .|+|...+...+....-.. . .........|.+|+|++.
T Consensus 116 ~p~~~~~~~~---~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~-----~--~~~~~~~l~i~~L~~~~~ 185 (215)
T 3mtr_A 116 SPSIDQVEPY---SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA-----K--EASMEGIVTIVGLKPETT 185 (215)
T ss_dssp CCEEEEEEEE---TTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEH-----H--HHHHHTEEEEECCCTTCE
T ss_pred CCcceEEEEe---cceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccc-----c--cccccccEEECCCCCCCE
Confidence 4655555432 4689999985431 1222 4677666544332221100 0 000013577999999999
Q ss_pred EEEEeCc------CCceeeEEEECCCCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPEVG 113 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~~~ 113 (320)
|.|||.. +.+|....|+|+|..+
T Consensus 186 y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 186 YAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred EEEEEEEEeCCcccCcccceeeEeccccC
Confidence 9999964 3467788899987643
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=95.04 E-value=0.072 Score=50.73 Aligned_cols=78 Identities=23% Similarity=0.273 Sum_probs=47.6
Q ss_pred CccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCC-CCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEE
Q 045849 5 ADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVD-EPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHH 79 (320)
Q Consensus 5 ~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~-~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (320)
|.|+.+|+ ...|....++- ...++++++|..+. ..+ ...|++...++..|..+. .+ . .. .
T Consensus 2 ~~v~~~~~-P~pP~~P~v~~--~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~-~------~t----~ 66 (573)
T 3uto_A 2 AMVADVPE-PEPPRFPIIEN--ILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS-R------YT----Y 66 (573)
T ss_dssp ------CC-CCCCEEEEEEE--ECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE-S------SS----E
T ss_pred CccccCCC-CccCCCCEEEE--eeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc-c------CC----E
Confidence 56777765 34676655443 34589999999763 122 356788777776676553 21 0 11 3
Q ss_pred EEecCCCCCCEEEEEeCc
Q 045849 80 CTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 80 ~~l~~L~p~t~Y~Y~v~~ 97 (320)
.+++||.||+.|.|||..
T Consensus 67 ~~V~~L~~g~~Y~FRV~A 84 (573)
T 3uto_A 67 TTIEGLRAGKQYEFRIIA 84 (573)
T ss_dssp EEECCCCTTCEEEEEEEE
T ss_pred EEeCCCCCCCcEeEEEEE
Confidence 578999999999999964
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=95.04 E-value=0.14 Score=42.16 Aligned_cols=84 Identities=18% Similarity=0.247 Sum_probs=52.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC-----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG-----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
..|..|++.... ..+++.|+|....... ...|+|....+..+.... ... .. ...+.|.+|+||+
T Consensus 123 ~pP~~l~~~~~~-~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~----~~~----~~--~~~~~l~~L~p~t 191 (227)
T 1eer_B 123 DAPVGLVARLAD-ESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV----EIL----EG--RTECVLSNLRGRT 191 (227)
T ss_dssp CCCEEEEEEECS-STTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE----EEC----TT--CCEEEECCCCSSC
T ss_pred CcCcceEEEEcC-CCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE----EEe----cC--ceEEEEcccCCCC
Confidence 478888887643 2478999999875321 246677655432221100 000 01 2256789999999
Q ss_pred EEEEEeCc-----------CCceeeEEEECC
Q 045849 90 KYYYVVGI-----------GHTERQFWFVTP 109 (320)
Q Consensus 90 ~Y~Y~v~~-----------~~~s~~~~F~t~ 109 (320)
.|..||.. +.||....|+|+
T Consensus 192 ~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 192 RYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred eEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 99999963 247778888883
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=94.93 E-value=0.08 Score=43.23 Aligned_cols=79 Identities=14% Similarity=0.240 Sum_probs=44.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEe
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVV 95 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 95 (320)
.|..++.+- .+++|++++|..+.. ..+.-.|..--+. ...++.. ... ..-+++||+|+|.|-|||
T Consensus 153 Pp~NL~At~--VT~tSVtLsW~aP~~-~~GI~gY~ly~~g---~~v~~v~-------~~~--tsyt~~gLk~~TeYsF~V 217 (238)
T 2w1n_A 153 PVRDFKASE--INKKNVTVTWTEPET-TEGLEGYILYKDG---KKVAEIG-------KDE--TSYTFKKLNRHTIYNFKI 217 (238)
T ss_dssp CCEEEEEEE--ECSSCEEEEEECCSC-CTTEEEEEEEETT---EEEEEEE-------TTC--CEEEECSCCTTCEEEEEE
T ss_pred CCCceEEEE--ccCCeEEEEecCCCC-CCCceeEEEEeCC---ceeEEee-------ccc--eEEEecCCCCCCEEEEEE
Confidence 455555543 356899999999753 2334444432221 1111111 000 124589999999999999
Q ss_pred Cc----CC--ceeeEEEECC
Q 045849 96 GI----GH--TERQFWFVTP 109 (320)
Q Consensus 96 ~~----~~--~s~~~~F~t~ 109 (320)
.. |. ..+...++|.
T Consensus 218 ~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 218 AAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEETTSCBCCCEEEEEECC
T ss_pred EEEeCCCCccccCcEEEEec
Confidence 64 22 2356667764
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.90 E-value=0.12 Score=40.68 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=52.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+.+.. ...++++|+|.-.... ....|+|..... .... .... .-...+.|++|+|++.|.+
T Consensus 8 ~~P~~l~~~~--~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~-~~~~-----~~~~------~~~~~~~i~~L~p~t~Y~~ 73 (186)
T 1qr4_A 8 DNPKDLEVSD--PTETTLSLRWRRPVAKFDRYRLTYVSPSG-KKNE-----MEIP------VDSTSFILRGLDAGTEYTI 73 (186)
T ss_dssp CCCEEEEEES--CCSSEEEEEEECCSSCCSEEEEEEECTTC-CEEE-----EEEC------TTCSEEEEESCCSSCEEEE
T ss_pred cCCCceEEEe--cCCCEEEEEEeCCCCCccEEEEEEEeCCC-CeeE-----EECC------CCCCEEEECCCCCCCEEEE
Confidence 4787777664 3468999999976432 345677764322 1111 1110 0112467899999999999
Q ss_pred EeCcC---Cce--eeEEEECCCCCCCCCCeEE
Q 045849 94 VVGIG---HTE--RQFWFVTPPEVGPDVPYSF 120 (320)
Q Consensus 94 ~v~~~---~~s--~~~~F~t~p~~~~~~~~~f 120 (320)
+|..- +.+ ....++|.|.+. ..+++
T Consensus 74 ~V~a~~~~~~s~~~~~~~~t~p~~P--~~l~~ 103 (186)
T 1qr4_A 74 SLVAEKGRHKSKPTTIKGSTVVGSP--KGISF 103 (186)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCCC--SCEEE
T ss_pred EEEEEcCCccCCCEEEEEECCCCCC--CccEE
Confidence 99752 222 356777765432 34444
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.89 E-value=0.11 Score=41.82 Aligned_cols=82 Identities=13% Similarity=0.060 Sum_probs=48.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCC--C----CCCCeEEEeccCCCC-ceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVD--E----PGTNTVVYWSENSEQ-KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~--~----~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
.|..+.+... ..+++.|+|.... . .....|+|....... +.... .. ........|++|+|+
T Consensus 107 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~-----~~-----~~~~~~~~i~~L~p~ 174 (205)
T 1cfb_A 107 NPDNVVGQGT--EPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN-----IF-----DWRQNNIVIADQPTF 174 (205)
T ss_dssp CCSCCEEECS--STTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE-----EC-----CTTCCEEEECSCCSS
T ss_pred CCeeeEeecC--CCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE-----ec-----CCCccEEEEcCCCCC
Confidence 5666666543 3579999999754 1 123466776654432 11111 00 001235679999999
Q ss_pred CEEEEEeCc------CC-ceeeEEEECC
Q 045849 89 TKYYYVVGI------GH-TERQFWFVTP 109 (320)
Q Consensus 89 t~Y~Y~v~~------~~-~s~~~~F~t~ 109 (320)
+.|.++|.. +. .|+...++|.
T Consensus 175 t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 175 VKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 999999964 23 3556666664
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.79 E-value=0.13 Score=41.38 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=45.9
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+.+ .....+++.|+|...... ..-.|+|..... .+... ... ......+.|++|+|+|.|
T Consensus 112 ~P~~~~~--~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~----~~~------~~~~~~~~i~~L~p~t~Y 178 (209)
T 2vkw_A 112 APKLEGQ--MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSS-EWKPE----IRL------PSGSDHVMLKSLDWNAEY 178 (209)
T ss_dssp CCEEEEE--ECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTS-CCCCC----EEE------CTTCCEEEECSCCTTCEE
T ss_pred CCccccc--ccccCCeEEEEEECcccCCCCCceEEEEEECCCC-CCcee----eec------CCCccEEEecCCCCCCEE
Confidence 5655443 334468999999986322 235667776222 11110 000 011124679999999999
Q ss_pred EEEeCc------CCceeeEEEEC
Q 045849 92 YYVVGI------GHTERQFWFVT 108 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t 108 (320)
.+||.. +..|+...+++
T Consensus 179 ~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 179 EVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EEEEEEEETTEECCCEEEEEECC
T ss_pred EEEEEEEeCCccCCcchhhhhhh
Confidence 999964 23455555544
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=94.72 E-value=0.031 Score=46.28 Aligned_cols=89 Identities=18% Similarity=0.237 Sum_probs=50.9
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+.+... ..+++.|+|.-..... .-.|+|....+..... +....... .........|++|+|+|.|
T Consensus 101 ~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~~L~p~t~Y 173 (234)
T 3f7q_A 101 EPGRLAFNVV--SSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLV---DNPKNRMLLIENLRESQPY 173 (234)
T ss_dssp CCCCCEEEEC--SSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECCC---SCTTCCEEEEECCCTTCCE
T ss_pred CCCccEEEEe--cCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEEe---cCCcceEEEeCCCCCCCeE
Confidence 5777777643 3578999998754322 3466676544321110 00000000 0111235779999999999
Q ss_pred EEEeCc------CCcee-eEEEECCCC
Q 045849 92 YYVVGI------GHTER-QFWFVTPPE 111 (320)
Q Consensus 92 ~Y~v~~------~~~s~-~~~F~t~p~ 111 (320)
.++|.. +..|. ...|+|.+.
T Consensus 174 ~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 174 RYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEEEEEECCCccCCCcCceeEeecCCC
Confidence 999964 23454 467787654
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.50 E-value=0.19 Score=37.16 Aligned_cols=67 Identities=16% Similarity=0.288 Sum_probs=41.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+++.-. . ++++|+|.-..... ...|+|.... ..... ... ..-....+|++|+|+|.|
T Consensus 30 ~P~~l~~~~~--~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~~~~~-----~~~------~~~~~~~~i~~L~p~t~Y 94 (126)
T 1x5i_A 30 VPSSLHVRPL--V-TSIVVSWTPPENQNIVVRGYAIGYGIGS-PHAQT-----IKV------DYKQRYYTIENLDPSSHY 94 (126)
T ss_dssp SCSEEEEEEE--T-TEEEEEEECCSCTTBCCCEEEEEECSSC-GGGEE-----EEC------CTTCCEEEECSCCSSCEE
T ss_pred CCCeeEEEec--C-CEEEEEEcCCCCCCCCEeEEEEEEEcCC-CCceE-----EEe------CCCeeEEEEeCCCCCCEE
Confidence 7878887765 2 79999999875322 3456665321 11111 111 111234679999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.++|..
T Consensus 95 ~~~V~A 100 (126)
T 1x5i_A 95 VITLKA 100 (126)
T ss_dssp CCEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=94.39 E-value=0.12 Score=45.18 Aligned_cols=83 Identities=14% Similarity=0.092 Sum_probs=51.6
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC------CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP------GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
..|..+.+.......+++.|+|...... -...|+|.......+..+.- . .......|.+|+|+
T Consensus 198 ~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-------~----~~~~~~~l~~L~p~ 266 (325)
T 1n26_A 198 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-------K----DLQHHCVIHDAWSG 266 (325)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-------G----GGCSEEEESSCCTT
T ss_pred CCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-------c----CCceEEEEeCCCCC
Confidence 3687787776543457999999987431 12457777665433332210 0 01135679999999
Q ss_pred CEEEEEeCc------C---CceeeEEEEC
Q 045849 89 TKYYYVVGI------G---HTERQFWFVT 108 (320)
Q Consensus 89 t~Y~Y~v~~------~---~~s~~~~F~t 108 (320)
+.|.+||.. | .||+...++|
T Consensus 267 t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 267 LRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 999999964 2 3556655555
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.36 E-value=0.25 Score=47.98 Aligned_cols=92 Identities=14% Similarity=0.256 Sum_probs=50.3
Q ss_pred CCCCccEEEEeeCCCCC---cEEEEEEeCCCCC----CCeEEEecc-CCCC-ceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 14 YNAPQQVHITQGDLVGK---AVIVSWVTVDEPG----TNTVVYWSE-NSEQ-KEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 14 ~~~p~~v~l~~~~~~~~---~~~v~W~t~~~~~----~~~v~y~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
...|..+.+......++ +++|+|.-..... ...|+|... .... .....-..... ..-...++|++
T Consensus 267 p~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v------~~~~~~~~l~~ 340 (680)
T 1zlg_A 267 PPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTT------DGFQNSVILEK 340 (680)
T ss_pred CCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEE------cCCeeEEEeCC
Confidence 34788888765421346 9999999653222 245666521 1000 00000000011 11235678999
Q ss_pred CCCCCEEEEEeCc------CCceee---EEEECCCC
Q 045849 85 LEFNTKYYYVVGI------GHTERQ---FWFVTPPE 111 (320)
Q Consensus 85 L~p~t~Y~Y~v~~------~~~s~~---~~F~t~p~ 111 (320)
|+|+|.|.+||.. +..+.. ..++|.+.
T Consensus 341 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 341 LQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 9999999999964 223333 77888654
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.12 E-value=0.2 Score=36.64 Aligned_cols=78 Identities=17% Similarity=0.264 Sum_probs=47.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCC--CCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVD--EPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~--~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..|.+.. ..+++.|+|.-.. ... ...|.|........... . . .. ..+.+. |+|+|
T Consensus 21 ~P~~v~~~~---~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~-------~-~---~~--~~~~~~-L~~~t 83 (117)
T 1wj3_A 21 PPGNVVWNA---TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVL-------N-T---NK--TSAELV-LPIKE 83 (117)
T ss_dssp CCCSCBCCE---ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEE-------E-E---SS--SEEEEE-CCCSS
T ss_pred CCccEEEEE---eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEE-------e-C---CC--cEEEEE-CCCCC
Confidence 566666654 2478999998762 121 24556665543222111 1 0 11 245666 99999
Q ss_pred EEEEEeCc------CCceeeEEEECCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
.|.+||.. |..|+...|+|..
T Consensus 84 ~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 84 DYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp CEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 99999953 4577788899864
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=93.94 E-value=0.28 Score=43.16 Aligned_cols=71 Identities=17% Similarity=0.272 Sum_probs=43.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
..|..+.+.... .+++.|+|...... ..-.|+|.......... ..... .-.....|++|+||+.|.|
T Consensus 277 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~----~~~~~------~~~~~~~~~~L~p~t~Y~~ 344 (368)
T 1fnf_A 277 DVPRDLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSPVQ----EFTVP------GSKSTATISGLKPGVDYTI 344 (368)
T ss_dssp CSCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEEETTCCSCCE----EEEEE------TTCCEEEECSCCTTCCEEE
T ss_pred CCCCeeEEEecC--CCEEEEEeeCCCCccceEEEEEEECCCCCccE----EEEcC------CCeeEEEecCCCCCCEEEE
Confidence 367677665433 47999999986532 23566776654321100 00110 1123577999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 345 ~V~A 348 (368)
T 1fnf_A 345 TVYA 348 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.43 E-value=0.025 Score=40.60 Aligned_cols=70 Identities=19% Similarity=0.262 Sum_probs=43.0
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCC-ceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQ-KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
..|..+++.-- ..+++.|+|.-.... ....|+|....... .... .. ..-...++|+||+|+|.|.
T Consensus 9 ~~P~~l~v~~~--t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~-----~v------~~~~~~~~l~~L~p~t~Y~ 75 (105)
T 2ekj_A 9 SPPSNLALASE--TPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEKSV-----SV------PGARSHVTLPDLQAATKYR 75 (105)
T ss_dssp CCCEEEEEEEE--ETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCCCB-----CC------BTTSSEEEECSCCSSCCCB
T ss_pred CCCCceEEEeC--CCCEEEEEEeCCCCcceEEEEEEEECCCCCccEEE-----Ee------CCCcCEEEeCCCCCCCEEE
Confidence 36777777643 358999999987422 23566676543211 1000 00 0112357899999999999
Q ss_pred EEeCc
Q 045849 93 YVVGI 97 (320)
Q Consensus 93 Y~v~~ 97 (320)
++|..
T Consensus 76 ~~V~A 80 (105)
T 2ekj_A 76 VLVSA 80 (105)
T ss_dssp CBBCB
T ss_pred EEEEE
Confidence 99975
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.32 E-value=0.21 Score=41.06 Aligned_cols=86 Identities=16% Similarity=0.148 Sum_probs=52.3
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC---------CCCeEEEeccCCCCceEE-EEEEEEEEeccccceEEEEEEecC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP---------GTNTVVYWSENSEQKEQA-EGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~---------~~~~v~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
..|..+.+.. ..++.|+|...... -...|+|....+ .+..+ .+.... .......+.+.+
T Consensus 102 ~PP~nltv~~----~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~~------~~~~~~~~~~~~ 170 (219)
T 3tgx_A 102 APPFDVTVTF----SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLIS------VDSRSVSLLPLE 170 (219)
T ss_dssp CCCEEEEEEE----SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEEC------SSCSEEEECTTS
T ss_pred CCCCceEEEe----CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeEe------cCCCEEEEEecc
Confidence 3677666662 36899999986321 135677776653 22111 111110 012234566889
Q ss_pred CCCCCEEEEEeCc---------C---CceeeEEEECCCC
Q 045849 85 LEFNTKYYYVVGI---------G---HTERQFWFVTPPE 111 (320)
Q Consensus 85 L~p~t~Y~Y~v~~---------~---~~s~~~~F~t~p~ 111 (320)
|.||+.|..||.. | .||+...|.|++.
T Consensus 171 L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 171 FRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp SCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 9999999999952 2 4688999999764
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=92.85 E-value=0.12 Score=47.49 Aligned_cols=72 Identities=15% Similarity=0.229 Sum_probs=44.5
Q ss_pred CCCCccEEEEeeCCCCCcEEEEEEeCCC--CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 14 YNAPQQVHITQGDLVGKAVIVSWVTVDE--PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 14 ~~~p~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
...|..+++.-.. .+|++|+|..+.. ...-.|.|.+...... ....... .-...++|+||+|||.|
T Consensus 370 l~~~~~l~~~~~~--~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~----~~~~~~~------~~~~~~~i~~L~p~t~Y 437 (461)
T 3csg_A 370 SSVPTNLEVVAAT--PTSLLISWDASYSSSVSYYRITYGETGGNSP----VQEFTVP------GSKSTATISGLSPGVDY 437 (461)
T ss_dssp CCSSCCCEEEEEC--SSCEEEECCCTTGGGCSEEEEEEEETTCCSC----CEEEEEE------TTCCEEEECSCCTTCEE
T ss_pred cCCCcceEEeccC--CCeEEEEecCCCCCcceEEEEEEEECCCCcc----ceEEEec------CCCceEEecCCCCCCEE
Confidence 3467788887654 5789999987621 1245677766542110 0011110 11245899999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
..+|..
T Consensus 438 ~~~v~a 443 (461)
T 3csg_A 438 TITVYA 443 (461)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.55 E-value=0.076 Score=50.28 Aligned_cols=89 Identities=13% Similarity=0.228 Sum_probs=53.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+.+...+...+++.|+|....... ...|+|....+..+..+... ..........|.+|+|+|.
T Consensus 200 ~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~t~ 271 (589)
T 3l5h_A 200 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 271 (589)
T ss_dssp CCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSSCC
T ss_pred CCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCCCE
Confidence 36777877655555789999998764221 24566666543222211000 0011123567999999999
Q ss_pred EEEEeCc------C---CceeeEEEECCCC
Q 045849 91 YYYVVGI------G---HTERQFWFVTPPE 111 (320)
Q Consensus 91 Y~Y~v~~------~---~~s~~~~F~t~p~ 111 (320)
|.+||.. + .||+...|+|.+.
T Consensus 272 Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 272 YVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 9999964 2 2467777787653
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.48 E-value=0.32 Score=39.39 Aligned_cols=72 Identities=14% Similarity=0.025 Sum_probs=40.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC---CCeEEEeccCC-CCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG---TNTVVYWSENS-EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+++.... ..+++.|+|....... ...|+|...++ ..+..+... ..-...+.|.+|+|||.
T Consensus 111 ~pP~~l~v~~~~-~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L~p~t~ 179 (206)
T 3v6o_A 111 LPPSSVKAEITI-NIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEVY----------DAKSKSVSLPVPDLCAV 179 (206)
T ss_dssp CCCCSCEEEEET-TTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEEC----------C---CEEEECCSCTTSC
T ss_pred CCCCceEeEEec-CCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEecc----------cCcceeEEeecCCCCCE
Confidence 468788887653 3579999999864321 34566766542 222222110 01123577999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|..||..
T Consensus 180 Y~vqVRa 186 (206)
T 3v6o_A 180 YAVQVRC 186 (206)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=92.44 E-value=0.78 Score=40.32 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=48.4
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC-CCCCeEEEeccCC-CCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE-PGTNTVVYWSENS-EQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.|..+.+. ....+++.|+|..... ...-.|+|..... ...... ... .-.....|+||+||+.|.+
T Consensus 280 ~P~~l~~~--~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~~ 346 (375)
T 3t1w_A 280 SPTGIDFS--DITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED-----RVP------HSRNSITLTNLTPGTEYVV 346 (375)
T ss_dssp CCEEEEEE--SCCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEEE-----EEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCccEee--eccCCEEEEEECCCCcceeeEEEEEEECCCCCcceeE-----EcC------CCccEEEECCCCCCCEEEE
Confidence 67666654 3346899999998543 2345677776543 111111 110 0122468999999999999
Q ss_pred EeCcC---Cc--eeeEEEECC
Q 045849 94 VVGIG---HT--ERQFWFVTP 109 (320)
Q Consensus 94 ~v~~~---~~--s~~~~F~t~ 109 (320)
+|..- +. .....++|.
T Consensus 347 ~V~A~~~~G~s~p~s~~~~~~ 367 (375)
T 3t1w_A 347 SIVALNGREESPLLIGQQSTV 367 (375)
T ss_dssp EEEEEETTEECCCEEEEEECC
T ss_pred EEEEECCCCCCCceeeeeEEe
Confidence 99752 22 234556664
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=92.34 E-value=1.9 Score=36.24 Aligned_cols=72 Identities=11% Similarity=0.051 Sum_probs=41.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC-CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE-PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
.|..+...... +++.|+|.-... .....|+|............-. ... ........+++|+|++.|.++
T Consensus 104 p~~~~~~~~~~---~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~L~p~t~Y~~~ 173 (290)
T 3l5i_A 104 PVMDLKAFPKD---NMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQ--QED-----GTVHRTYLRGNLAESKCYLIT 173 (290)
T ss_dssp CCEEEEEEEET---TEEEEEEECCSSCCCEEEEEEEEECSSSCCCCEEE--EEE-----TTCSEEECCSCCCTTCEEEEE
T ss_pred ccceeEEEeCC---CeEEEEEeCCCCCCCcEEEEEEECCCCCCCCcCeE--Ecc-----CCCcceEEecCcCCccEEEEE
Confidence 34445555442 699999998754 2346677776544311000000 000 112234567999999999999
Q ss_pred eCc
Q 045849 95 VGI 97 (320)
Q Consensus 95 v~~ 97 (320)
|..
T Consensus 174 V~A 176 (290)
T 3l5i_A 174 VTP 176 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=92.28 E-value=0.21 Score=46.48 Aligned_cols=87 Identities=14% Similarity=0.180 Sum_probs=53.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+++... ..+++.|+|....... ...|+|...++..+.. ... .. . ...-.+.+.|.+|+|+|.
T Consensus 388 ~PP~nl~v~~~--s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~-~~~---~~--~-~~~~~~~v~l~~L~P~T~ 458 (488)
T 2q7n_A 388 HDPTSLKVKDI--NSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVR-NAT---IR--G-AEDSTYHVAVDKLNPYTA 458 (488)
T ss_dssp CCCEEEEEEEC--STTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEE-EEE---EE--C-CEEEEEEEEECSCCSSCC
T ss_pred CCCeEEEEEec--CCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceE-EEE---Ee--c-CCCcEEEEEeCCCCCCce
Confidence 36777776653 3579999999874322 2456676654322111 001 00 0 012345678999999999
Q ss_pred EEEEeCc--------CCceeeEEEECCC
Q 045849 91 YYYVVGI--------GHTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~--------~~~s~~~~F~t~p 110 (320)
|..||.. +.||+...|+|++
T Consensus 459 Y~~rVRA~~~g~G~WS~WS~~v~~~T~e 486 (488)
T 2q7n_A 459 YTFRVRCSSKTFWKWSRWSDEKRHLTTE 486 (488)
T ss_dssp BBCCEEEEESSCSSCCCCCCCCCBCCCC
T ss_pred EEEEEEEEECCCCCCCCCcCCEeEECCC
Confidence 9999853 2567777888865
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.24 E-value=0.54 Score=37.84 Aligned_cols=76 Identities=18% Similarity=0.181 Sum_probs=47.1
Q ss_pred cEEEEeeCCCCCcEEEEEEeCCCC--------------CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 19 QVHITQGDLVGKAVIVSWVTVDEP--------------GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 19 ~v~l~~~~~~~~~~~v~W~t~~~~--------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
.|.+...+ +++.|.|...... -.-.|.|+..++....... . .. ..++|.+
T Consensus 98 ~v~~~~~~---~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~------~----~~---~~~~l~~ 161 (201)
T 3lqm_A 98 GMQVEVLA---DCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT------P----QY---DFEVLRN 161 (201)
T ss_dssp EEEEEEET---TEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC------C----SS---SEEEECS
T ss_pred EEEEEEeC---CEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE------e----cC---ceEEEec
Confidence 67775443 6999999876311 1345556554432211110 0 11 2378999
Q ss_pred CCCCCEEEEEeCc--------CCceeeEEEECCC
Q 045849 85 LEFNTKYYYVVGI--------GHTERQFWFVTPP 110 (320)
Q Consensus 85 L~p~t~Y~Y~v~~--------~~~s~~~~F~t~p 110 (320)
|+|+|.|..+|.. +.+|+...|+|.+
T Consensus 162 L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~ 195 (201)
T 3lqm_A 162 LEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTH 195 (201)
T ss_dssp CCTTCEEEEEEEEEETTTTEECCCCCCEEEECCC
T ss_pred CCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCC
Confidence 9999999999963 2467788888865
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=92.16 E-value=0.42 Score=38.36 Aligned_cols=81 Identities=11% Similarity=0.161 Sum_probs=49.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
..|..+++.... ...+.|+|...... -...|+|....+..+..+... ......|.+|.|++.|.
T Consensus 100 ~pP~~l~~~~~~--~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~~------------~~~~~~l~~l~p~~~Y~ 165 (199)
T 2b5i_C 100 WAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRYT 165 (199)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEEC------------SSCEEEECSCCTTSCEE
T ss_pred CCCcEEEEEECC--CCCEEEEECCCCCCCceEEEEEEeecCCcccEEEecc------------CceEEEecCCCCCcEEE
Confidence 367777777654 36899999997421 134688887654434332110 01346689999999999
Q ss_pred EEeCc---------C---CceeeEEEECC
Q 045849 93 YVVGI---------G---HTERQFWFVTP 109 (320)
Q Consensus 93 Y~v~~---------~---~~s~~~~F~t~ 109 (320)
.||.. | .||....|.|.
T Consensus 166 vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 166 FRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp EEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred EEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 99963 1 35666667663
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=91.97 E-value=0.53 Score=44.29 Aligned_cols=94 Identities=17% Similarity=0.145 Sum_probs=50.4
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC-----CCeEEEeccCCCCce-EEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG-----TNTVVYWSENSEQKE-QAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
.+|..+... ...++++|+|.-....+ ...|+|......... ..-+....+.. .........++|++|+|+
T Consensus 335 saP~nl~~~---vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~-~~~~~~~ts~tI~gL~P~ 410 (536)
T 3fl7_A 335 SAPHYLTAV---GMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSE-PPHGLTRTSVTVSDLEPH 410 (536)
T ss_dssp CCBSCEEEE---CCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESS-CSSSBCSSEEEEECCCTT
T ss_pred CcccceEEE---ecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEE-eecCCccceeEeCCCCCC
Confidence 478777543 34589999998754322 235566543211000 00000000100 000112345789999999
Q ss_pred CEEEEEeCc----C-----CceeeEEEECCCCC
Q 045849 89 TKYYYVVGI----G-----HTERQFWFVTPPEV 112 (320)
Q Consensus 89 t~Y~Y~v~~----~-----~~s~~~~F~t~p~~ 112 (320)
|.|.++|.. + ..+....++|.+.+
T Consensus 411 T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 411 MNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp CEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred CEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 999999953 1 24567788887643
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=91.93 E-value=0.64 Score=38.90 Aligned_cols=82 Identities=11% Similarity=0.171 Sum_probs=51.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC--CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG--TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
..|..+++.... ...+.|+|....... ...|+|....+..+...... ......|.+|.|++.|.
T Consensus 138 ~PP~nl~v~~~~--~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~~------------~~~~~~l~~L~p~~~Y~ 203 (247)
T 2erj_C 138 WAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRYT 203 (247)
T ss_dssp CCCEEEEEEESS--SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEEC------------SSCEEEESCCCTTSCEE
T ss_pred CCCCeEEEEECC--CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEecC------------CceEEEecCCCCCCEEE
Confidence 367777777543 368999999974211 23578877554444332210 01245689999999999
Q ss_pred EEeCc---------C---CceeeEEEECCC
Q 045849 93 YVVGI---------G---HTERQFWFVTPP 110 (320)
Q Consensus 93 Y~v~~---------~---~~s~~~~F~t~p 110 (320)
.||.. + .||+...|.|.+
T Consensus 204 vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~ 233 (247)
T 2erj_C 204 FRVRSRFNPLCGSAQHWSEWSHPIHWGSNT 233 (247)
T ss_dssp EEEEEEECSSSCCCCCCCCCCCCEEECC--
T ss_pred EEEEEEeCCCCCCCCccCCCCcCEEEECCC
Confidence 99953 1 467777888754
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.89 E-value=0.051 Score=36.48 Aligned_cols=63 Identities=16% Similarity=0.063 Sum_probs=36.8
Q ss_pred EEEEeC--CCCCCCeEEEeccCCCC-ceE--EEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc---CC--ceee
Q 045849 34 VSWVTV--DEPGTNTVVYWSENSEQ-KEQ--AEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI---GH--TERQ 103 (320)
Q Consensus 34 v~W~t~--~~~~~~~v~y~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~---~~--~s~~ 103 (320)
|.|..+ +......+.|.+++... +.. +.|.. +.-+|.||+||.+|.=++.+ .+ ....
T Consensus 2 IqWnap~~shi~~YIL~w~pk~~~~~wKev~IPgh~-------------nSYtIsGLkPGvtYegQLisV~r~g~~Evtr 68 (89)
T 1q38_A 2 RGSNAPQPSHISKYILRWRPKNSVGRWKEATIPGHL-------------NSYTIKGLKPGVVYEGQLISIQQYGHQEVTR 68 (89)
T ss_dssp CCCCCSSCSSCSEEEEEEEETTTTCCCEEEEECSSS-------------SCCCCCCCCTTCCEEEEEEEECTTSCCCEEE
T ss_pred ccccCCCcccceeeEEEEEecCCCCccEEEEcCCcc-------------ceEEEeccCCCcEEEEEEEeeeecccCCceE
Confidence 456633 23345667777766542 222 22222 23359999999999877754 22 3456
Q ss_pred EEEECC
Q 045849 104 FWFVTP 109 (320)
Q Consensus 104 ~~F~t~ 109 (320)
+.|+|.
T Consensus 69 fdfTT~ 74 (89)
T 1q38_A 69 FDFTTT 74 (89)
T ss_dssp EEECSS
T ss_pred EEEEec
Confidence 777774
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.61 E-value=2.4 Score=36.41 Aligned_cols=77 Identities=25% Similarity=0.319 Sum_probs=46.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-----------CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-----------GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-----------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
.| .|.+...+ +++.|+|. .... -.-.|.|+..+........+ -...++|.+
T Consensus 104 pP-~v~~~~~~---~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~-------------~~~~~~l~~ 165 (306)
T 3s98_A 104 PP-EVHLEAED---KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYK 165 (306)
T ss_dssp CC-EEEEEECS---SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEEE-------------ECTEEEECS
T ss_pred CC-eEEEEEcC---CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEec-------------ccceEEEcc
Confidence 45 47766543 58999999 3221 01256666554432211111 012578999
Q ss_pred CCCCCEEEEEeCc--------CCceeeEEEECCC
Q 045849 85 LEFNTKYYYVVGI--------GHTERQFWFVTPP 110 (320)
Q Consensus 85 L~p~t~Y~Y~v~~--------~~~s~~~~F~t~p 110 (320)
|+|+|.|..+|.. |..|+...++|..
T Consensus 166 L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 166 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp CCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred CCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 9999999999953 3456777778753
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=91.46 E-value=2 Score=38.54 Aligned_cols=77 Identities=23% Similarity=0.316 Sum_probs=47.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC-----------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG-----------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
.| .|.+.... +++.|+|. ..... .-.|.|+..+........+ -.....|.+
T Consensus 108 pP-~v~~~~~~---~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~-------------~~~~~~i~~ 169 (414)
T 3se4_A 108 PP-EVHLEAED---KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYK 169 (414)
T ss_dssp CC-EEEEEECS---SCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEEE-------------ECSEEEECC
T ss_pred CC-eEEEEEcC---CEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEec-------------CCcEEEEcC
Confidence 44 47766543 58999999 53221 2456777665432211111 122477999
Q ss_pred CCCCCEEEEEeCcC--------CceeeEEEECCC
Q 045849 85 LEFNTKYYYVVGIG--------HTERQFWFVTPP 110 (320)
Q Consensus 85 L~p~t~Y~Y~v~~~--------~~s~~~~F~t~p 110 (320)
|.|+|.|..+|..- .+|+...+.|..
T Consensus 170 L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 170 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp CCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred CCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 99999999999641 245566677753
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=91.15 E-value=0.79 Score=37.07 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=44.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC---C----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP---G----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~---~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 87 (320)
..|..+.+.... +....|+|...... . ...|+|....+. +....... ..........+.+|.|
T Consensus 99 ~PP~nl~~~~~~--~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~L~p 168 (207)
T 1iar_B 99 RAPGNLTVHTNV--SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDP-ADFRIYNV-------TYLEPSLRIAASTLKS 168 (207)
T ss_dssp CCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSC-SCEEEEEE-------CSSCCEEEECC-----
T ss_pred CCCCCeEEEEcc--CCCEEEEECCCCCccccccccEEEEEEEccCCCc-hhheeeee-------ecCCcEEEEEHHHCCC
Confidence 467777776533 35899999987421 1 256777765442 11111110 0122344566779999
Q ss_pred CCEEEEEeCc------C---CceeeEEEECCCC
Q 045849 88 NTKYYYVVGI------G---HTERQFWFVTPPE 111 (320)
Q Consensus 88 ~t~Y~Y~v~~------~---~~s~~~~F~t~p~ 111 (320)
|+.|..||.. | .||....|.|.++
T Consensus 169 ~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 169 GISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 9999999963 2 5778889998654
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.59 E-value=1.8 Score=35.43 Aligned_cols=79 Identities=20% Similarity=0.166 Sum_probs=50.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-----C------------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-----G------------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIH 78 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-----~------------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (320)
.| .|.|+.. .+++.|.|.-.... + .-.|.|+..++.. .... .. . .+
T Consensus 111 PP-~v~v~~~---~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~--~~~~---~~-----~---~~ 173 (221)
T 4doh_R 111 PP-EVALTTD---EKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNR--TWSQ---CV-----T---NH 173 (221)
T ss_dssp CC-EEEEECC---SSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTE--EEEE---EE-----C---SS
T ss_pred CC-EEEEEEC---CCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCc--EEEE---ee-----c---Cc
Confidence 45 4888743 36899999965421 0 2466677654321 1111 10 1 12
Q ss_pred EEEecCCCCCCEEEEEeCc--------CCceeeEEEECCCC
Q 045849 79 HCTIRHLEFNTKYYYVVGI--------GHTERQFWFVTPPE 111 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~v~~--------~~~s~~~~F~t~p~ 111 (320)
.+.|.+|+|+|.|..+|.. +.+|+...|+|.+.
T Consensus 174 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 174 TLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred EEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 5679999999999999853 34688889999754
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=90.43 E-value=2.4 Score=37.11 Aligned_cols=83 Identities=25% Similarity=0.206 Sum_probs=49.1
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CC----CeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GT----NTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+.-. ..+++.|+|.-.... +. ..|+|...+...+.... .........|.+|+|++.
T Consensus 198 ~P~~~~~~~~--~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~~ 264 (389)
T 2jll_A 198 SPYGVKIIEL--SQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNTT 264 (389)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTCE
T ss_pred CCcceEEeec--cCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCCE
Confidence 5655555443 357899999854221 22 24566655443332111 011123467899999999
Q ss_pred EEEEeCc------CCceeeEEEECCCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|.|+|.. +..+....|+|.+.
T Consensus 265 y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 265 YEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEcCCccCCCCcceEEEecCC
Confidence 9999964 23466677888654
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.42 E-value=0.26 Score=39.32 Aligned_cols=65 Identities=18% Similarity=0.221 Sum_probs=38.0
Q ss_pred EeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc
Q 045849 23 TQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 23 ~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
.......+++.|+|.-.... ....|+|.......... ..... .-...+.|+||+|++.|.++|..
T Consensus 119 ~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~----~~~v~------~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 119 SVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ----YLDLP------STATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp SCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCCE----EEEEE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCcee----EEEcC------CceeEEEeCCCCCCCEEEEEEEE
Confidence 33444568999999876432 23456676432211110 01111 11235789999999999999975
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.15 E-value=0.12 Score=48.09 Aligned_cols=87 Identities=14% Similarity=0.104 Sum_probs=53.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+.+.. ..++++.|+|...... -...|+|....+..... .+... ....-.+.+.|.+|+|+|.
T Consensus 383 ~PP~nl~v~~--~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~-~~~~~~~s~~l~~L~PgT~ 453 (483)
T 3e0g_A 383 HTPTSFKVKD--INSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQ-GVENSSYLVALDKLNPYTL 453 (483)
T ss_dssp CCCEEEEECC--SSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCB-CCSSSBCCCCCCSCCSSSS
T ss_pred CCCeeeEEEE--ecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEe-ccCCceeEEEEeccCCCcE
Confidence 3677777653 2357899999987432 24678888765432110 11000 0011223567999999999
Q ss_pred EEEEeCc--------CCceeeEEEECCC
Q 045849 91 YYYVVGI--------GHTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~--------~~~s~~~~F~t~p 110 (320)
|..||.. +.||+...|+|++
T Consensus 454 Y~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 454 YTFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp CEEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 9999964 2467788888864
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.00 E-value=0.87 Score=36.86 Aligned_cols=80 Identities=11% Similarity=0.120 Sum_probs=48.6
Q ss_pred CccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeC
Q 045849 17 PQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVG 96 (320)
Q Consensus 17 p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 96 (320)
|-.+.|+.. .+++.|.|......-.-.|.|++.++...... .... .....+.|.+|+|+|.|..+|.
T Consensus 112 PP~v~v~~~---~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~----~~~~------~~~~~~~i~~L~p~t~Ycv~Vr 178 (206)
T 4doh_B 112 RPGMEITKD---GFHLVIELEDLGPQFEFLVAYWRREPGAEEHV----KMVR------SGGIPVHLETMEPGAAYCVKAQ 178 (206)
T ss_dssp CCCEEEEEE---TTEEEEEECCCCTTCEEEEEEEESSSSCCCEE----EEEC------CSSSEEEEEECCSSSCEEEEEE
T ss_pred CCeEEEEeC---CCEEEEEecCCCCcEEEEEEEEEcCCCceeEE----eEEc------cCCeEEEEeCCCCCCcEEEEEE
Confidence 335777632 47999999865222356778887754322111 1110 0012478999999999999986
Q ss_pred c--------CCceeeEEEECC
Q 045849 97 I--------GHTERQFWFVTP 109 (320)
Q Consensus 97 ~--------~~~s~~~~F~t~ 109 (320)
. +..|+...|+|.
T Consensus 179 a~~~~~~~~g~~S~~~C~~t~ 199 (206)
T 4doh_B 179 TFVKAIGRYSAFSQTECVEVQ 199 (206)
T ss_dssp EEEGGGTEECCCCCCEEECC-
T ss_pred EEecCCCCCCCCCCCEeEEcc
Confidence 3 245666777774
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=89.89 E-value=3.5 Score=37.07 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=55.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
..|..|.+.... +.+.|+|....... ...|+|.... ..+..+... . .......+.+.+
T Consensus 110 ~pP~~l~v~~~~---~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~--~------~~~~~~~~~~~~ 177 (419)
T 2gys_A 110 PEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL--L------SNTSQATLGPEH 177 (419)
T ss_dssp CCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE--E------ESSSEEEECTTT
T ss_pred CCCCceEEEecC---CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee--c------ccceEEEechhh
Confidence 468888877654 48999999874321 1356666554 222221110 0 011222333449
Q ss_pred CCCCCEEEEEeCc---------C---CceeeEEEECCCCCCCCCCeEEEEEEc
Q 045849 85 LEFNTKYYYVVGI---------G---HTERQFWFVTPPEVGPDVPYSFGLIGD 125 (320)
Q Consensus 85 L~p~t~Y~Y~v~~---------~---~~s~~~~F~t~p~~~~~~~~~f~~~gD 125 (320)
|.|++.|..||.. | .||+...|+|.+.. ...+..+-...+
T Consensus 178 L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~ 229 (419)
T 2gys_A 178 LMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFFD 229 (419)
T ss_dssp CCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEEC
T ss_pred cCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEEC
Confidence 9999999999963 2 35688899997654 233444444433
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=89.57 E-value=1.2 Score=38.37 Aligned_cols=78 Identities=8% Similarity=0.005 Sum_probs=42.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEE-E--EEEEeccccceEEEEEEecCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGK-V--YTYKYYNYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~l~~L~p 87 (320)
..|..+++... .+++.|+|....... ...|+|....+..+...... . ..... .........+.|.+|+|
T Consensus 201 ~pP~~l~~~~~---~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~-~~~~~~~~~~~l~~L~p 276 (314)
T 3bpo_C 201 DPPHIKNLSFH---NDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEF-ERNVENTSCFMVPGVLP 276 (314)
T ss_dssp CCCEEEEEEEE---TTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTS-SCCCSSEEEEEEESCCT
T ss_pred CCCCEEEEEEc---CCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEeccccccccccc-ccccCCceEEEEccCCC
Confidence 36777887743 479999999875322 24566765543322111000 0 00000 00012245678999999
Q ss_pred CCEEEEEeC
Q 045849 88 NTKYYYVVG 96 (320)
Q Consensus 88 ~t~Y~Y~v~ 96 (320)
+|.|.+||.
T Consensus 277 ~t~Y~~qVr 285 (314)
T 3bpo_C 277 DTLNTVRIR 285 (314)
T ss_dssp TSCEEEEEE
T ss_pred CCEEEEEEE
Confidence 999999995
|
| >3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A | Back alignment and structure |
|---|
Probab=89.18 E-value=0.7 Score=39.96 Aligned_cols=79 Identities=18% Similarity=0.264 Sum_probs=38.7
Q ss_pred CCCCccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCC-CCCCCeEEEeccCCCCc--eEEEE--EEEEEEeccccceE
Q 045849 2 PLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVD-EPGTNTVVYWSENSEQK--EQAEG--KVYTYKYYNYTSGY 76 (320)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~--~~~~~--~~~~~~~~~~~~~~ 76 (320)
||-+-.+..|. +.+|+-+.++.+ .+++.++|.... ......|.=++...... +.+.. +.++|
T Consensus 7 ~~~~~~~~~~~-~~~~~~L~at~~---~~~v~LsWs~s~~~v~~~~VYRdT~s~~sgr~ria~~~~st~ty--------- 73 (344)
T 3b4n_A 7 PLCALTLAAPS-FAAQTTLMLSQK---SDVNYLGWSTDESKVARQEVYRGTTSNPDLRERIAVLDAETRTF--------- 73 (344)
T ss_dssp --------------CCEEEEEEEE---TTEEEEEEEECCSSEEEEEEEEESSSCGGGCEEEEEECSSCCEE---------
T ss_pred hhhhhhhccCC-CCCCceeeeecc---CCeEEEEeecCCCCeeeEEEEccCCCCCCcceEEEeecccccEE---------
Confidence 55444444444 456666666554 378999999874 22334443333333222 22222 22222
Q ss_pred EEEEEecCCCCCCEEEEEeCc
Q 045849 77 IHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 77 ~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
+=++|.+||+|||.|..
T Consensus 74 ----tDt~~~~GttYyYwVk~ 90 (344)
T 3b4n_A 74 ----KDADTNSGLNYWYWVDV 90 (344)
T ss_dssp ----EECCCCTTCCCEEEEEE
T ss_pred ----EecCcCCCcEEEEEEEE
Confidence 34699999999999964
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.16 E-value=1.7 Score=42.03 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=39.4
Q ss_pred CC-ccEEEEeeCCCCCcEEEEEEeCCC----CCCCeEEEeccCC--------CCceEEEEEEEEEEeccccceEEEEEEe
Q 045849 16 AP-QQVHITQGDLVGKAVIVSWVTVDE----PGTNTVVYWSENS--------EQKEQAEGKVYTYKYYNYTSGYIHHCTI 82 (320)
Q Consensus 16 ~p-~~v~l~~~~~~~~~~~v~W~t~~~----~~~~~v~y~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (320)
.| ..+.+. +..+++++|+|..... +....|+|..... ..+..+.. .....+.|
T Consensus 162 ~P~~~l~v~--~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~i 227 (680)
T 1zlg_A 162 KPRKELRFT--ELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQL 227 (680)
T ss_pred cccccceEE--eccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEEe
Confidence 45 455554 3456899999997532 1124556655421 11111111 01224679
Q ss_pred cCCCCCCEEEEEeCc
Q 045849 83 RHLEFNTKYYYVVGI 97 (320)
Q Consensus 83 ~~L~p~t~Y~Y~v~~ 97 (320)
++|+|+|.|.|||..
T Consensus 228 ~~L~P~t~Y~frV~A 242 (680)
T 1zlg_A 228 TDIRPSRWYQFRVAA 242 (680)
T ss_pred CCCCCCCEEEEEEEE
Confidence 999999999999964
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.98 E-value=1.8 Score=35.47 Aligned_cols=30 Identities=7% Similarity=0.191 Sum_probs=20.7
Q ss_pred EecCCCCCCEEEEEeCc------CCceeeEEEECCC
Q 045849 81 TIRHLEFNTKYYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 81 ~l~~L~p~t~Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
.+.+|.|++.|.|||.. |..|++..+.+.+
T Consensus 166 ~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 166 AHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp BCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eeecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 35689999999999964 3456666665543
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.48 E-value=4.1 Score=39.49 Aligned_cols=88 Identities=15% Similarity=0.173 Sum_probs=51.7
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC------CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP------GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
.+|..+.+... .+++++|+|.-.... ....|+|.............. ... .........|++|+|+
T Consensus 361 ~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--~~~----~~~~~~~~~i~~L~p~ 432 (731)
T 2v5y_A 361 RGPRKLEVVEV--KSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEV--SWD----TENSHPQHTITNLSPY 432 (731)
T ss_dssp CCCEEEEEEEE--CSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEE--ECC----SSCSSCEEEECSCCSS
T ss_pred CCCceeEEEec--cCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeE--EEE----ecCCcceEEECCCCCC
Confidence 36777766544 357999999975311 134577776543221111100 001 1112235789999999
Q ss_pred CEEEEEeCcC-----CceeeEEEECCC
Q 045849 89 TKYYYVVGIG-----HTERQFWFVTPP 110 (320)
Q Consensus 89 t~Y~Y~v~~~-----~~s~~~~F~t~p 110 (320)
|.|.++|..- +.|....++|..
T Consensus 433 t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 433 TNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp CEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 9999999641 246677888854
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E | Back alignment and structure |
|---|
Probab=85.18 E-value=0.15 Score=51.24 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=26.6
Q ss_pred EEEEecCCCCCCEEEEEeCc-----------CCceeeEEEECCCC
Q 045849 78 HHCTIRHLEFNTKYYYVVGI-----------GHTERQFWFVTPPE 111 (320)
Q Consensus 78 ~~~~l~~L~p~t~Y~Y~v~~-----------~~~s~~~~F~t~p~ 111 (320)
....|++|+|+|.|.|||.. +.+|+...|+|.+.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~ 593 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT 593 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC
Confidence 45789999999999999976 23566777888653
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=84.14 E-value=1.1 Score=36.63 Aligned_cols=15 Identities=27% Similarity=0.248 Sum_probs=12.6
Q ss_pred hCCCcEEEecCcccc
Q 045849 303 KYKVDVVFAGHVHAY 317 (320)
Q Consensus 303 ~~~v~lvl~GH~H~y 317 (320)
..+++++++||+|..
T Consensus 176 ~~~~~~vv~GHth~~ 190 (221)
T 1g5b_A 176 IKGADTFIFGHTPAV 190 (221)
T ss_dssp CBTSSEEEECSSCCS
T ss_pred ccCCCEEEECCCCCc
Confidence 357899999999974
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.97 E-value=0.87 Score=37.46 Aligned_cols=32 Identities=19% Similarity=-0.007 Sum_probs=22.8
Q ss_pred EEEecCCCCCCEEEEEeCcC------CceeeEEEECCC
Q 045849 79 HCTIRHLEFNTKYYYVVGIG------HTERQFWFVTPP 110 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~v~~~------~~s~~~~F~t~p 110 (320)
..++++|+|+|.|.|||..- .++....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 35688999999999999652 345666777754
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=82.80 E-value=1.5 Score=35.01 Aligned_cols=70 Identities=13% Similarity=0.100 Sum_probs=42.0
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC---CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCC-CCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG---TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHL-EFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~p~t~ 90 (320)
.+|..+...... .++++++|.-..... ...|+|........ .... ...-...+.|.+| .|++.
T Consensus 9 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~-----~~~~------~~~~~~~~~i~~L~~~~t~ 75 (215)
T 1bqu_A 9 EKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCKA------KRDTPTSCTVDYSTVYFVN 75 (215)
T ss_dssp CCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEEC------CSSCTTEEECSSCCCTTSC
T ss_pred CCCEeeEeEECC--CCcEEEEcCCCCCCCCCceEEEEEEEcCCCcc-----cccc------ccCCcceEEEcCCcccccc
Confidence 378777766544 478999999765332 34555544321100 0000 0111235789999 99999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.++|..
T Consensus 76 Y~~~V~A 82 (215)
T 1bqu_A 76 IEVWVEA 82 (215)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=81.84 E-value=7.9 Score=35.38 Aligned_cols=80 Identities=9% Similarity=0.008 Sum_probs=48.1
Q ss_pred CCeEEEEEEcCCCCCCc--HHHHHHHHh---CCCCCceEEEcccccccCCC------C----CC--CChhhhh-HHHHHh
Q 045849 116 VPYSFGLIGDLGQSYDS--NVTLTHYER---NPRKGQTLLFVGDLSYADNY------P----CH--DNNRWDT-WGRFVE 177 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~--~~~l~~~~~---~~~~~d~vl~~GD~~~~~~~------~----~~--~~~~~~~-~~~~~~ 177 (320)
.++++++++........ ..-|..+++ ...+||.+|++|.+++.... . +. .....+. |...+.
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 57999999998765432 233444433 21279999999999976421 0 00 0112233 333323
Q ss_pred ----hhhccCCeEeCCCCCccc
Q 045849 178 ----RSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 178 ----~~~~~~P~~~~~GNHD~~ 195 (320)
.+...+-++.+||+||..
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHhccCCCEEEEeCCccccc
Confidence 333456799999999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 320 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 4e-61 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 1e-43 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 3e-40 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 5e-12 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 3e-05 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 6e-04 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 0.001 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.004 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 195 bits (496), Expect = 4e-61
Identities = 166/210 (79%), Positives = 185/210 (88%)
Query: 111 EVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWD 170
+ G DVPY+FGLIGDLGQS+DSN TL+HYE +P+KGQT+LFVGDLSYAD YP HDN RWD
Sbjct: 1 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWD 60
Query: 171 TWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSI 230
TWGRF ERS AYQPWIWTAGNHEI+F PEI ET PFKP+S+RYHVPY AS ST+PFWYSI
Sbjct: 61 TWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSI 120
Query: 231 KRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEG 290
KRAS +IIVLSSYSAYG+ TPQY WL++EL KV RSETPWLIVLMH+P YNSYN+H+MEG
Sbjct: 121 KRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEG 180
Query: 291 ETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320
E MR +E W VKYKVDVVFAGHVHAYERS
Sbjct: 181 EAMRTKFEAWFVKYKVDVVFAGHVHAYERS 210
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 143 bits (362), Expect = 1e-43
Identities = 74/110 (67%), Positives = 97/110 (88%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGDLVG+A+I+SWVT+DEPG++ V YWSE + +K A
Sbjct: 3 MPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIA 62
Query: 61 EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPP 110
+GK+ TY+++NY+SG+IHH TIR L++NTKYYY VG+ +T R+F F+TPP
Sbjct: 63 KGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 135 bits (340), Expect = 3e-40
Identities = 74/111 (66%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVT-VDEPGTNTVVYWSENSEQKEQ 59
MP D+DVF VP GYNAPQQVHITQGD G+ VI+SW T D+ G N V YWSENS+ +++
Sbjct: 9 MPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKR 68
Query: 60 AEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPP 110
A G V TYKYYNYTS +IHHCTI+ LE++TKYYY +G G +RQFWFVTPP
Sbjct: 69 AMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 63.3 bits (152), Expect = 5e-12
Identities = 35/231 (15%), Positives = 63/231 (27%), Gaps = 29/231 (12%)
Query: 114 PDVPYSFGLIGDLGQSYDSNVTLTHYERNPR---------KGQTLLFVGDLSYADNYPCH 164
P F +GD G ++ N + +L +GD Y
Sbjct: 1 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 60
Query: 165 DNNRWDTWGRFVERSAAYQ--PWIWTAGNHEIDFYPEIGE---------TVPFKPYSHRY 213
+ R+ V + + PW AGNH+ P Y R+
Sbjct: 61 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRF 120
Query: 214 HVPYRASGSTAPF----WYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETP 269
+P Q W++++L ++
Sbjct: 121 KIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQL---AAAKED 177
Query: 270 WLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320
+++V H P ++ + + P L +KV GH H +
Sbjct: 178 YVLVAGHYPVWSIAEHGPT--HCLVKQLLPLLTTHKVTAYLCGHDHNLQYL 226
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 42.4 bits (98), Expect = 3e-05
Identities = 25/228 (10%), Positives = 48/228 (21%), Gaps = 52/228 (22%)
Query: 142 NPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQ-PWIWTAGNHEIDFYPEI 200
+ Q ++ +GD+ D + + + A GNHE +
Sbjct: 46 RRERVQCVVQLGDI--IDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRP 103
Query: 201 GETVPFKPYSHRY--HVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTP------- 251
+ R G + + ++L +Y
Sbjct: 104 SLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHT 163
Query: 252 ---------------------------------------QYKWLEEELPKVNRSETPWLI 272
Q +WL+ L + + +
Sbjct: 164 HSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV-L 222
Query: 273 VLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320
+ H P + + V AGH H R
Sbjct: 223 IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRC 270
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 38.2 bits (87), Expect = 6e-04
Identities = 18/171 (10%), Positives = 37/171 (21%), Gaps = 12/171 (7%)
Query: 149 LLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKP 208
+ +G+L D F S A+ P + G + + + E +
Sbjct: 36 IALIGNLMP------KAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLREAANVEL 89
Query: 209 YSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSET 268
+ + I + E L + +
Sbjct: 90 VHPEMRNVHETFTFWRGPYLVAGVGGE-IADEGEPEEHEALRYPAWVAEYRLKALWELKD 148
Query: 269 PWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319
I L H Y+ E ++ + +V
Sbjct: 149 YPKIFLFHTMPYHKGLNEQGSHEVAHLIKT-----HNPLLVLVAGKGQKHE 194
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 37.5 bits (85), Expect = 0.001
Identities = 29/183 (15%), Positives = 48/183 (26%), Gaps = 15/183 (8%)
Query: 135 TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194
L ++ + ++F GDL+ + R + A +W GNH+
Sbjct: 35 LLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGA---ELVWVMGNHDD 91
Query: 195 DFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYK 254
+ V R V + + Q
Sbjct: 92 RAELRKFLLDEAPSMAPLDRV----------CMIDGLRIIVLDTSVPGHHHGEIRASQLG 141
Query: 255 WLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHV 314
WL EEL T + H P + + + L V + AGH+
Sbjct: 142 WLAEELATPAPDGTILAL--HHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHL 199
Query: 315 HAY 317
H
Sbjct: 200 HYS 202
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 35.8 bits (81), Expect = 0.004
Identities = 13/184 (7%), Positives = 41/184 (22%), Gaps = 7/184 (3%)
Query: 136 LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER-SAAYQPWIWTAGNHEI 194
+ E ++ + +++ +T +F G ++
Sbjct: 39 ILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDA 98
Query: 195 DFYPEIGETVPFKPYSHRYHVPYRASGSTA-PFWYSIKRASVYIIVLSSYSAYGKYTPQY 253
+ + V + F +
Sbjct: 99 PLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYV 158
Query: 254 KWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEP--WLVKYKVDVVFA 311
+++ + + ++ L+ + + P + E + +V
Sbjct: 159 EYILKFVNELKPR---RLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIV 215
Query: 312 GHVH 315
GHV
Sbjct: 216 GHVG 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 320 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.96 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.96 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.95 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.9 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.87 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.81 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.69 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.65 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.13 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.07 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.97 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.94 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.9 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.87 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.84 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.55 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.39 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.03 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.97 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.89 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.88 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.87 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.86 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.8 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.8 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 97.76 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.72 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.69 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.69 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.69 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.68 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.67 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.66 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.65 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.61 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 97.56 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.53 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.51 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 97.45 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.45 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 97.43 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 97.41 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 97.39 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.38 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.37 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.36 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.34 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 97.32 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 97.28 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.28 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.23 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.23 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 97.2 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 97.2 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 97.19 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.19 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 97.18 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.17 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 97.16 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 97.15 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.11 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 97.11 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.11 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 97.1 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 97.08 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 97.07 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.03 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 97.01 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 96.97 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.96 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.93 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.92 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.89 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.88 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.85 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.82 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.8 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.8 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.78 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.73 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.73 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.69 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.67 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.63 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.63 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.61 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 96.59 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.52 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.51 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 96.48 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.44 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.33 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 96.32 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.3 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.85 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.83 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.81 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.79 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 95.55 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.43 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 95.22 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 94.96 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 94.67 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 94.43 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 94.35 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 94.11 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 93.43 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 93.0 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 92.91 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 92.27 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 91.09 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 87.44 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1.1e-45 Score=327.43 Aligned_cols=208 Identities=80% Similarity=1.386 Sum_probs=178.8
Q ss_pred CCCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCC
Q 045849 113 GPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNH 192 (320)
Q Consensus 113 ~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 192 (320)
|++.++||+++||+|.......++.++.....+|||||++||++|+++....+..+|+.|++.++++...+|+++++|||
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~GNH 82 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNH 82 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCGG
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEecccc
Confidence 45679999999999887666667766544445899999999999987765556678999999999999999999999999
Q ss_pred ccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEE
Q 045849 193 EIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLI 272 (320)
Q Consensus 193 D~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~i 272 (320)
|+......+....+..|..+|.+|.++.....+.||+|++|+++||+||++..+..+.+|++||+++|+++++++.+|+|
T Consensus 83 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~i 162 (312)
T d2qfra2 83 EIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLI 162 (312)
T ss_dssp GTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCCEEE
T ss_pred cccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCCEEE
Confidence 98654433444556778889999988766677889999999999999999988888899999999999998778899999
Q ss_pred EEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 273 VLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 273 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
|++|+|+|++.......+..+|+.|.+||++++||+||+||+|.||||
T Consensus 163 v~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt 210 (312)
T d2qfra2 163 VLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERS 210 (312)
T ss_dssp EECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEE
T ss_pred EEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEE
Confidence 999999999876655567789999999999999999999999999996
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=1.5e-29 Score=188.09 Aligned_cols=110 Identities=67% Similarity=1.259 Sum_probs=102.1
Q ss_pred CCCCCccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEE
Q 045849 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHC 80 (320)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (320)
|||+-+||++|++.++|+||||+++++++++|+|+|.|.+.+..+.|+||++++.+...+.|....+...+....++|+|
T Consensus 3 ~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v 82 (112)
T d2qfra1 3 MPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHT 82 (112)
T ss_dssp CCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEE
T ss_pred CCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEE
Confidence 79999999999999999999999999989999999999877788999999999888889999887776656667899999
Q ss_pred EecCCCCCCEEEEEeCcCCceeeEEEECCC
Q 045849 81 TIRHLEFNTKYYYVVGIGHTERQFWFVTPP 110 (320)
Q Consensus 81 ~l~~L~p~t~Y~Y~v~~~~~s~~~~F~t~p 110 (320)
+|+||+|||+|+|||++++||+.++|+|+|
T Consensus 83 ~Lt~L~P~T~Y~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 83 TIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EECSCCTTCEEEEEECCSSSCEEEEEECCC
T ss_pred EECCCCCCCEEEEEECCCCceeeEEEEcCC
Confidence 999999999999999999999999999986
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=2e-29 Score=221.05 Aligned_cols=189 Identities=20% Similarity=0.300 Sum_probs=130.1
Q ss_pred CCeEEEEEEcCCCCCCc----H------HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHH--hhhhccC
Q 045849 116 VPYSFGLIGDLGQSYDS----N------VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFV--ERSAAYQ 183 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~----~------~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 183 (320)
..+||+++||+|..... . ..+.+.++. .+|||||++||++|.++.......+|..+...+ ......+
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNV 81 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTC
T ss_pred CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhh-CCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCC
Confidence 47999999999865432 1 122333333 399999999999998775444444554433222 1235689
Q ss_pred CeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEe------CcEEEEEEcccCC------C-----
Q 045849 184 PWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKR------ASVYIIVLSSYSA------Y----- 246 (320)
Q Consensus 184 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~------g~v~fi~lds~~~------~----- 246 (320)
|+++++||||+..+.. ....+..+...+.+| ..||++.+ +.++|+++|+... .
T Consensus 82 P~~~~~GNHD~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~ 151 (302)
T d1utea_ 82 PWHVLAGNHDHLGNVS--AQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQP 151 (302)
T ss_dssp CEEECCCHHHHHSCHH--HHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSC
T ss_pred ceEEeecccccccccc--cccchhhccccccCC--------CcccceeecccCCCCcEEEEEccceeEeecccccccccc
Confidence 9999999999853211 011122233344444 23566553 4699999998310 0
Q ss_pred ------CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 247 ------GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 247 ------~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
....+|++||++.|++ .+.+|+||++|||+++.... ......++.|.+||++++|++|||||+|.|+|+
T Consensus 152 ~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~ 226 (302)
T d1utea_ 152 ERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL 226 (302)
T ss_dssp CSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEE
T ss_pred cccccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCCCcceEEE
Confidence 0136899999999998 56789999999999987543 245677899999999999999999999999984
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.95 E-value=8.7e-28 Score=180.50 Aligned_cols=110 Identities=66% Similarity=1.239 Sum_probs=100.5
Q ss_pred CCCCCccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCC-CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEE
Q 045849 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVD-EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHH 79 (320)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (320)
||++..+|.+|++.++|+||||+++++++++|+|+|.|.. ..+.+.|+||..++.+...+.|....+...+....++|+
T Consensus 9 ~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~ 88 (119)
T d1xzwa1 9 MPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHH 88 (119)
T ss_dssp CCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEE
T ss_pred cCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCeEEE
Confidence 7999999999999999999999999998999999999953 345679999999988888999988887766667789999
Q ss_pred EEecCCCCCCEEEEEeCcCCceeeEEEECCC
Q 045849 80 CTIRHLEFNTKYYYVVGIGHTERQFWFVTPP 110 (320)
Q Consensus 80 ~~l~~L~p~t~Y~Y~v~~~~~s~~~~F~t~p 110 (320)
|+|+||+|||+|+|||++++||+.++|+|+|
T Consensus 89 v~LtgL~P~T~Y~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 89 CTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEECCCCTTCEEEEEECCGGGCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCCCccceEEEeCCC
Confidence 9999999999999999999999999999986
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.90 E-value=9.3e-24 Score=180.96 Aligned_cols=181 Identities=21% Similarity=0.190 Sum_probs=120.8
Q ss_pred CCeEEEEEEcCCCCCC---------cHH----HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--
Q 045849 116 VPYSFGLIGDLGQSYD---------SNV----TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-- 180 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~---------~~~----~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-- 180 (320)
..|||++++|+|.... ... .++.+.+...+|||||++||++..+ ....++.+.+.++++.
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g-----~~~~~~~~~~~l~~~~~~ 77 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKG-----EPAAYRKLRGLVEPFAAQ 77 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSC-----CHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC-----ChhHHHHHHHHhhhhhhh
Confidence 4899999999997432 122 2334433324899999999999643 2245566666666543
Q ss_pred ccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC----CCChHHHHHH
Q 045849 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY----GKYTPQYKWL 256 (320)
Q Consensus 181 ~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL 256 (320)
..+|++.++||||... .+...+.... .......|++..++++|++|||.... ....+|++||
T Consensus 78 ~~~p~~~v~GNHD~~~-----------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl 143 (256)
T d2hy1a1 78 LGAELVWVMGNHDDRA-----------ELRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWL 143 (256)
T ss_dssp HTCEEEECCCTTSCHH-----------HHHHHTTCCC---CCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHH
T ss_pred cCCCEEEEcccccchh-----------hhhhhhcccc---ccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHH
Confidence 3689999999999631 1111111110 11334578889999999999986432 2347899999
Q ss_pred HHhcccCCCCCCCEEEEEecccceecCCCC-CCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 257 EEELPKVNRSETPWLIVLMHAPWYNSYNYH-YMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 257 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
++.|++. ..+.+||++|||++...... ......-++.+..++++++|+++||||.|...
T Consensus 144 ~~~L~~~---~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~ 203 (256)
T d2hy1a1 144 AEELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYST 203 (256)
T ss_dssp HHHHTSC---CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCE
T ss_pred HHHHHhh---hccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhh
Confidence 9999874 33458899999998754321 00111224678889999999999999999754
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.87 E-value=1.1e-22 Score=175.80 Aligned_cols=181 Identities=14% Similarity=0.164 Sum_probs=117.3
Q ss_pred eEEEEEEcCCCCCC---------cH----HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC
Q 045849 118 YSFGLIGDLGQSYD---------SN----VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP 184 (320)
Q Consensus 118 ~~f~~~gD~~~~~~---------~~----~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (320)
++|++++|+|.... .. .+++.+.+...+||+||++||+++.. ....++.+.+.++++ .+|
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~-----~~~~y~~~~~~l~~l--~~p 73 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCG-----RPEEYQVARQILGSL--NYP 73 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC-----CHHHHHHHHHHHTTC--SSC
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCC-----cchhHHHHHHHHhcc--CCC
Confidence 68999999996421 11 23344444335899999999999642 223455555556553 689
Q ss_pred eEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC----CCChHHHHHHHHhc
Q 045849 185 WIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY----GKYTPQYKWLEEEL 260 (320)
Q Consensus 185 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL~~~L 260 (320)
+++++||||.... ..+ .+..+..... .......|.++.++++|++|||.... ....+|++||++.|
T Consensus 74 ~~~i~GNHD~~~~--~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~L 143 (271)
T d3d03a1 74 LYLIPGNHDDKAL--FLE--YLQPLCPQLG------SDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQL 143 (271)
T ss_dssp EEEECCTTSCHHH--HHH--HHGGGSGGGC------SCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHH
T ss_pred EEEEecCccchHH--HHH--Hhhhhhhccc------cccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHHH
Confidence 9999999997411 000 0000111110 11234467788889999999996432 23589999999999
Q ss_pred ccCCCCCCCEEEEEecccceecCCCCC-CccHHHHHHHHHHHHhC-CCcEEEecCccccc
Q 045849 261 PKVNRSETPWLIVLMHAPWYNSYNYHY-MEGETMRVMYEPWLVKY-KVDVVFAGHVHAYE 318 (320)
Q Consensus 261 ~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 318 (320)
++. + .+++||++|||++....... .....-.++|.++|+++ +|+++|+||.|...
T Consensus 144 ~~~--~-~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~ 200 (271)
T d3d03a1 144 FEG--G-DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLT 200 (271)
T ss_dssp HHH--T-TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCE
T ss_pred hhh--c-cceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhh
Confidence 884 2 34478889999876543211 11112246788999998 69999999999754
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.81 E-value=1.1e-20 Score=164.88 Aligned_cols=196 Identities=17% Similarity=0.151 Sum_probs=115.9
Q ss_pred CeEEEEEEcCCCCCC----------------cHHHH----HHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHH
Q 045849 117 PYSFGLIGDLGQSYD----------------SNVTL----THYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFV 176 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~----------------~~~~l----~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~ 176 (320)
-|||++++|+|.+.. +...+ +.+.+. +|||||++||+++.... ........+....
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~--~~DfVv~~GDl~~~~~~--~~~~~~~~~~~~~ 78 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRE--RVQCVVQLGDIIDGHNR--RRDASDRALDTVM 78 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHT--TCSEEEECSCCBCTHHH--HTTCHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhC--CCCEEEECCCCCCCCCc--chhHHHHHHHHHH
Confidence 499999999996421 11223 333333 99999999999964321 1112223333333
Q ss_pred hhhh-ccCCeEeCCCCCccccCCCCC---CcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC-------
Q 045849 177 ERSA-AYQPWIWTAGNHEIDFYPEIG---ETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA------- 245 (320)
Q Consensus 177 ~~~~-~~~P~~~~~GNHD~~~~~~~~---~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------- 245 (320)
+.+. ..+|+++++||||........ .... .....................+....++++|+.+++...
T Consensus 79 ~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (320)
T d2nxfa1 79 AELDACSVDVHHVWGNHEFYNFSRPSLLSSRLN-SAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREE 157 (320)
T ss_dssp HHHHTTCSEEEECCCHHHHHHCCHHHHHTSTTC-CCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCT
T ss_pred HHHHHcCCCEEEecccCccccccchhccccccc-chhhhcccccccccCCCCccceeecCCCeEEEEecCcccccccccc
Confidence 3332 378999999999985221000 0000 000000000000011123445677889999999986310
Q ss_pred ---------------------------------------CCCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCC
Q 045849 246 ---------------------------------------YGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYH 286 (320)
Q Consensus 246 ---------------------------------------~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~ 286 (320)
.....+|++||++.|++++ ....++|+++|+|++......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~-~~~~~viv~~H~p~~~~~~~~ 236 (320)
T d2nxfa1 158 ESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSD-HKQERVLIFSHLPVHPCAADP 236 (320)
T ss_dssp TSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHH-HHTCEEEEEESSCCCTTSSCG
T ss_pred cccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhh-hcCCceEEEECCCCccCCCCC
Confidence 0124789999999998753 234578999999998754432
Q ss_pred CCccHHHHHHHHHHHHhC-CCcEEEecCcccccc
Q 045849 287 YMEGETMRVMYEPWLVKY-KVDVVFAGHVHAYER 319 (320)
Q Consensus 287 ~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R 319 (320)
. ......++|..+|.++ +|+++|+||+|.+++
T Consensus 237 ~-~~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~ 269 (320)
T d2nxfa1 237 I-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGR 269 (320)
T ss_dssp G-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEE
T ss_pred c-cchhhHHHHHHHHHhCCCeeEEEeCCcCCcCe
Confidence 1 1112356788899999 599999999998653
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.69 E-value=2e-17 Score=137.77 Aligned_cols=178 Identities=8% Similarity=0.016 Sum_probs=106.3
Q ss_pred CeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcccc
Q 045849 117 PYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDF 196 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 196 (320)
.-+|+++||+|........+-+.+.. .++|+||++||++.... ....+..+.+.+.. ..+|+++++||||...
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~-~~~D~vv~~GDl~~~~~----~~~~~~~~~~~L~~--~~~pv~~i~GNHD~~~ 77 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPD-TGADAIALIGNLMPKAA----KSRDYAAFFRILSE--AHLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHH-HTCSEEEEESCSSCTTC----CHHHHHHHHHHHGG--GCSCEEEECCTTSCSH
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhh-cCCCEEEECCCCCCCCc----cchHHHHhhhhhcc--ccceEEEEecCCCchh
Confidence 45788999999764333322222222 38999999999995432 12333444444443 3689999999999742
Q ss_pred CCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC----------CCCChHHHHHHHHhcccCCCC
Q 045849 197 YPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA----------YGKYTPQYKWLEEELPKVNRS 266 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~----------~~~~~~q~~WL~~~L~~~~~~ 266 (320)
..... ..+......+.. ......+.+..+++.++.++.... ......|..|+++.++..
T Consensus 78 ~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 146 (228)
T d1uf3a_ 78 WEYLR-----EAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL--- 146 (228)
T ss_dssp HHHHH-----HHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGS---
T ss_pred hhhhh-----hhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhc---
Confidence 10000 000000000000 001122456667888888775221 112367899999999874
Q ss_pred CCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 267 ETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 267 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
...+.|+++|+|++....... . .+.+..++++++++++++||+|..
T Consensus 147 ~~~~~il~~H~p~~~~~~~~~-~----~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 147 KDYPKIFLFHTMPYHKGLNEQ-G----SHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp CSCCEEEEESSCBCBTTTBTT-S----BHHHHHHHHHHCCSEEEECCSSCE
T ss_pred cCCceEEEEeeeccCcccccc-c----cHHHHHHHHhcCCcEEEEcccccc
Confidence 334479999999987544321 1 235677788999999999999964
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.65 E-value=3.8e-16 Score=132.02 Aligned_cols=185 Identities=11% Similarity=0.102 Sum_probs=105.3
Q ss_pred CeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhh-----------------------hhHH
Q 045849 117 PYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRW-----------------------DTWG 173 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~-----------------------~~~~ 173 (320)
+.||+++||+|........+...+.+ .+||+||++||+++.... ...| ..+.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~-~~~D~vli~GDl~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~ 76 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAE-KQPDILVVVGNILKNEAL----EKEYERAHLARREPNRKVIHENEHYIIETLD 76 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHH-HCCSEEEEESCCCCCHHH----HHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhh-cCCCEEEEecccCCCCCC----CHHHHHHHHhhhhhceeeeccccccchhhHH
Confidence 57999999999776555555444444 399999999999964211 0011 1122
Q ss_pred HHHhhhh-ccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCC-----
Q 045849 174 RFVERSA-AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYG----- 247 (320)
Q Consensus 174 ~~~~~~~-~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~----- 247 (320)
..++.+. ..+|+++++||||........ ..+......+. .......+.+..+++.|+.+++.....
T Consensus 77 ~~~~~L~~~~~pv~~i~GNHD~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T d2yvta1 77 KFFREIGELGVKTFVVPGKNDAPLKIFLR-----AAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEED 148 (257)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCCHHHHHH-----HHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSS
T ss_pred HHHHHHHhcCCcEEEEeCCCcchhhHHHH-----Hhccccccccc---cccccceeEEecCCeEEEEeccccCCccccch
Confidence 2333332 368999999999964110000 00000000000 001122344455778888776532110
Q ss_pred ----CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCc--cHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 248 ----KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYME--GETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 248 ----~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
....+..|+...++. .+....|+++|+|++......... .....+.+..++++++++++++||.|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~ 221 (257)
T d2yvta1 149 FVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKG 221 (257)
T ss_dssp SSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCE
T ss_pred hhhhhhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCC
Confidence 113344556666655 345568999999997654321111 1122457888899999999999999964
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.13 E-value=3.1e-11 Score=105.14 Aligned_cols=75 Identities=15% Similarity=0.180 Sum_probs=49.1
Q ss_pred eEEEEEEcCCCCCCc----------HHHHHHHHhC--CCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-ccCC
Q 045849 118 YSFGLIGDLGQSYDS----------NVTLTHYERN--PRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AYQP 184 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~----------~~~l~~~~~~--~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P 184 (320)
+||+++||+|.+... ...++++++. ..++|+||++||+++.... .......+.+.++.+. .++|
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~---~~~~~~~~~~~~~~l~~~~i~ 77 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRP---SPGTLKKAIALLQIPKEHSIP 77 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSC---CHHHHHHHHHHHHHHHTTTCC
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCC---CHHHHHHHHHHHhhHHhcCCc
Confidence 689999999986432 1233333221 1389999999999864221 1223344555566554 4689
Q ss_pred eEeCCCCCccc
Q 045849 185 WIWTAGNHEID 195 (320)
Q Consensus 185 ~~~~~GNHD~~ 195 (320)
++.++||||..
T Consensus 78 v~~i~GNHD~~ 88 (333)
T d1ii7a_ 78 VFAIEGNHDRT 88 (333)
T ss_dssp EEEECCTTTCC
T ss_pred EEEeCCCCccc
Confidence 99999999985
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.07 E-value=4.3e-12 Score=106.42 Aligned_cols=71 Identities=6% Similarity=-0.013 Sum_probs=46.3
Q ss_pred eEEEEEEcCCCCCCcH-HHHHHHHh---CCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 118 YSFGLIGDLGQSYDSN-VTLTHYER---NPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~-~~l~~~~~---~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
++|+++||+|...... ..++.+.. ...++|.||++||+++.+. .-.+..+.+..+....++++++||||
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~-------~~~evi~~l~~l~~~~~v~~v~GNHD 73 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFP-------YPKEVIEVIKDLTKKENVKIIRGKYD 73 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS-------CHHHHHHHHHHHHHHSCEEEECCHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCC-------CcHHHHHHHHHHhhcCCEEEEeccHH
Confidence 4899999999643322 22333321 2236799999999996431 12344555666655668999999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 74 ~~ 75 (251)
T d1nnwa_ 74 QI 75 (251)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.97 E-value=3.6e-09 Score=84.17 Aligned_cols=63 Identities=14% Similarity=0.107 Sum_probs=42.4
Q ss_pred eEEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+||+++||+|..... ...+.++.+. .++|.|+++||++. ....+.++.+ ..|++++.||||.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~-~~~D~Ii~~GDi~~------------~e~l~~l~~~--~~~v~~V~GN~D~ 65 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVP-GKIQHILCTGNLCT------------KESYDYLKTL--AGDVHIVRGDFDE 65 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCT-TSCSEEEECSCCBS------------HHHHHHHHHH--CSEEEECCCTTCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcc-cCCCEEEEccCccc------------hhhHHHHHhh--CCceEEEeCCcCc
Confidence 689999999975432 2344444444 37999999999982 1223334433 2478999999997
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 66 ~ 66 (182)
T d1z2wa1 66 N 66 (182)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.94 E-value=9.3e-09 Score=82.58 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=41.3
Q ss_pred EEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|+++||+|..... ...+.++.+. .++|.||++||++.. ...+.++.+. .++++|+||||..
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~-~~vD~ii~~GDi~~~------------~~l~~l~~l~--~~v~~V~GN~D~~ 69 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLAT-DKINYVLCTGNVCSQ------------EYVEMLKNIT--KNVYIVSGDLDSA 69 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHC-TTCCEEEECSCCCCH------------HHHHHHHHHC--SCEEECCCTTCCS
T ss_pred EEEEeCCCCCcccchhhHHHHHHhcc-CCCCEEEECCCCCCH------------HHHHHHHhhC--CCEEEEcCCCCcc
Confidence 7999999975322 2345566555 389999999999821 1223333332 3688999999985
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.90 E-value=9.4e-10 Score=86.31 Aligned_cols=62 Identities=16% Similarity=0.193 Sum_probs=41.5
Q ss_pred eEEEEEEcCCCCCCcH-HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSN-VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
+||+++||+|...... +.++.+.+. ++|.|+++||++.. .. ...+.. ...|++.+.||||..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~--~~D~ii~~GD~~~~--------~~----~~~l~~--~~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVSL--------FV----IKEFEN--LNANIIATYGNNDGE 63 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCST--------HH----HHHGGG--CSSEEEEECCTTCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhc--CCCEEEECCCccCH--------HH----HHHHhh--cCccEEEEccccccc
Confidence 6899999999653322 334444444 89999999999831 11 111222 346899999999975
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.87 E-value=2e-08 Score=79.11 Aligned_cols=58 Identities=10% Similarity=0.107 Sum_probs=39.2
Q ss_pred CeEEEEEEcCCCCCCcHHHHHHHHhC-CCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 117 PYSFGLIGDLGQSYDSNVTLTHYERN-PRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l~~~~~~-~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
..||+++||+|.. ...++++++. ..++|.|+++||+++.... . ...++.++.||||..
T Consensus 3 ~~kI~viSD~Hgn---~~al~~vl~~~~~~~D~iih~GD~~~~~~~--------~----------~~~~~~~V~GN~D~~ 61 (173)
T d3ck2a1 3 KQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELRPDS--------P----------LWEGIRVVKGNMDFY 61 (173)
T ss_dssp CEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSCTTC--------G----------GGTTEEECCCTTCCS
T ss_pred CCEEEEEeccCCC---HHHHHHHHHHhhcCCCEEEECCcccCcccc--------h----------hhcCCeEEecCcccc
Confidence 5699999999964 3344433321 1379999999998854210 1 113788999999974
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.84 E-value=1.3e-08 Score=81.28 Aligned_cols=134 Identities=22% Similarity=0.200 Sum_probs=79.8
Q ss_pred EEEEEcCCCCCCc--------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCe
Q 045849 120 FGLIGDLGQSYDS--------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPW 185 (320)
Q Consensus 120 f~~~gD~~~~~~~--------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 185 (320)
+.++||+|.+... ...++.+.+...+.|.|+++||+++..+. .+.+.+.++.+.. ..
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~-------~~~~~~~l~~L~g--~~ 74 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFND-------KNEYLRIWKALPG--RK 74 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCC-------TTSHHHHHHHSSS--EE
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCC-------HHHHHHHHHHCCC--ce
Confidence 4569999976422 12344555555577999999999875321 1234455666543 46
Q ss_pred EeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCC
Q 045849 186 IWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNR 265 (320)
Q Consensus 186 ~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~ 265 (320)
+.+.||||.... .....+ ..+. .....+ +.
T Consensus 75 ~lI~GNHD~~~~----------~~~~~~--------------~~~~-~~~~~~----------------------~~--- 104 (188)
T d1xm7a_ 75 ILVMGNHDKDKE----------SLKEYF--------------DEIY-DFYKII----------------------EH--- 104 (188)
T ss_dssp EEECCTTCCCHH----------HHTTTC--------------SEEE-SSEEEE----------------------EE---
T ss_pred EEEecCCCchhh----------hhhhch--------------hhHH-HHHHHh----------------------hh---
Confidence 889999997421 000000 0000 000001 11
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
. .-.|+++|.|+...... ........+..+..+.+++++|+||+|..
T Consensus 105 ~--g~~i~l~H~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lhGH~H~~ 151 (188)
T d1xm7a_ 105 K--GKRILLSHYPAKDPITE---RYPDRQEMVREIYFKENCDLLIHGHVHWN 151 (188)
T ss_dssp T--TEEEEEESSCSSCSSCC---SCHHHHHHHHHHHHHTTCSEEEECCCCCC
T ss_pred C--CeEEEEEeCCCcccccc---ccccchhHHHHHHHhcCceEEEEeeccCC
Confidence 1 12799999999664432 22344567778899999999999999953
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.55 E-value=1.4e-07 Score=82.17 Aligned_cols=187 Identities=17% Similarity=0.105 Sum_probs=89.9
Q ss_pred CeEEEEEEcCCCCCC-------cH----HHHHHHHhC--CCCCc-eEEEcccccccCCCCCCCChhhhhHHHHHhhhhcc
Q 045849 117 PYSFGLIGDLGQSYD-------SN----VTLTHYERN--PRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAY 182 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~-------~~----~~l~~~~~~--~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
.++|+.++|+|.... .. ..++++.+. ..+++ ++|.+||+....... .........+.|+.+.
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s--~~~~g~~~~~~mn~~g-- 83 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPES--DLQDAEPDFRGMNLVG-- 83 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHH--HTTTTHHHHHHHHHHT--
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHH--HHhCChHHHHHHHhcC--
Confidence 689999999996421 11 123333221 02455 566699998532110 0111233344444432
Q ss_pred CCeEeCCCCCccccCCCCCCcccCcccceeeeCCCC--------CCCCCCCcEEEEEeCcEE--EEEEcccCC-------
Q 045849 183 QPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYR--------ASGSTAPFWYSIKRASVY--IIVLSSYSA------- 245 (320)
Q Consensus 183 ~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~--------~~~~~~~~~ys~~~g~v~--fi~lds~~~------- 245 (320)
. =..++||||+.+... .+..+.....+|.- ........|..++.++++ ||++-+...
T Consensus 84 ~-Da~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~~ 157 (337)
T d1usha2 84 Y-DAMAIGNHEFDNPLT-----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPE 157 (337)
T ss_dssp C-CEEECCGGGGSSCHH-----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCC
T ss_pred C-eEEEechhhhccchH-----HHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCcc
Confidence 2 246789999974311 01111111111110 001112346667888854 566644211
Q ss_pred CC------CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 246 YG------KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 246 ~~------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
.. ...+..+...+.|++. .+.+.+|+++|.+............ ....+...+...+||+++.||+|..
T Consensus 158 ~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 158 YFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALPAGSLAMIVGGHSQDP 231 (337)
T ss_dssp CCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSCTTSSSEEECCSSCCB
T ss_pred cccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhCcccCceEEecCccCcc
Confidence 00 1112232233344432 3567899999998765332211111 1123333334458999999999964
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.39 E-value=1.4e-06 Score=75.24 Aligned_cols=184 Identities=15% Similarity=0.219 Sum_probs=85.9
Q ss_pred CCCeEEEEEEcCCCCCC----------c---HH----HHHHHHhCCCCCc-eEEEcccccccCCCCCCCChhhhhHHHHH
Q 045849 115 DVPYSFGLIGDLGQSYD----------S---NV----TLTHYERNPRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFV 176 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~----------~---~~----~l~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~ 176 (320)
-+.++|+..+|+|.... . .. .+++..+. .+++ ++|.+||++.................+.+
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~-~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~m 87 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHS-RNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF 87 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHH-TTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHh-cCCCEEEEECCccCCCCchhhhcccCChHHHHHH
Confidence 46799999999996321 0 11 12222222 2566 56679999965322110001112223333
Q ss_pred hhhhccCCe-EeCCCCCccccCCCCCCcccCcccceeeeCCCCC--------CC---CCCCcEEEEEeC--cEEEEEEcc
Q 045849 177 ERSAAYQPW-IWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRA--------SG---STAPFWYSIKRA--SVYIIVLSS 242 (320)
Q Consensus 177 ~~~~~~~P~-~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~--------~~---~~~~~~ys~~~g--~v~fi~lds 242 (320)
+. +++ +.++||||+++.... ...+......+..|.-. .. .....|..+..+ ++.++++..
T Consensus 88 n~----lgyDa~t~GNHEfd~g~~~--l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~ 161 (322)
T d3c9fa2 88 IK----QDYDLLTIGNHELYLWENS--KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGF 161 (322)
T ss_dssp TT----SCCSEECCCGGGSSSHHHH--HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEEC
T ss_pred hc----cCCcEEeecceecccchHH--HHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEee
Confidence 33 333 678999999642100 00000001111111100 00 112345556654 477887765
Q ss_pred cCCCCC---C--------hHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CC-cEE
Q 045849 243 YSAYGK---Y--------TPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KV-DVV 309 (320)
Q Consensus 243 ~~~~~~---~--------~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v-~lv 309 (320)
...... + ..+..|+...++ .+.+.+|++.|.+.-.... ........+.+.. ++ +++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~~-------~~~~~~~~la~~~~~~~~~i 230 (322)
T d3c9fa2 162 LFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNWG-------EFYQVHQYLRQFFPDTIIQY 230 (322)
T ss_dssp CCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTTC-------HHHHHHHHHHHHCTTSEEEE
T ss_pred ccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCcccccc-------ccchHHHHHHHhCCCCCEEE
Confidence 322111 0 112245544443 3677899999987633211 1111122233333 34 468
Q ss_pred EecCccc
Q 045849 310 FAGHVHA 316 (320)
Q Consensus 310 l~GH~H~ 316 (320)
|.||+|.
T Consensus 231 igGHsH~ 237 (322)
T d3c9fa2 231 FGGHSHI 237 (322)
T ss_dssp EECSSCC
T ss_pred ecccccc
Confidence 9999995
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.03 E-value=2.3e-06 Score=67.33 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=43.9
Q ss_pred eEEEEEEcCCCCCCcHH-HHHHHHhCCCCCceEEEcccccccCCCCCCCCh-hhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSNV-TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNN-RWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
+||+++||+|....... .++.+.+. ++|.+|++||++........... ........++. ...|++.+.||||..
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~--~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNE--VAHKVIAVRGNCDSE 77 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHT--TGGGEEECCCTTCCH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhc--CCCEEEEcCcccccCccchhhhccCcHHHHHHHHh--cCCcEEEecCCCCch
Confidence 69999999995432222 23333333 89999999999964332111111 11122222222 245899999999985
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.97 E-value=1.2e-05 Score=68.43 Aligned_cols=176 Identities=16% Similarity=0.104 Sum_probs=84.9
Q ss_pred CeEEEEEEcCCCCCC--------------cH----HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhh
Q 045849 117 PYSFGLIGDLGQSYD--------------SN----VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER 178 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~--------------~~----~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
.++|+..+|+|.... .. ..++++.+.. ..-++|-+||++...... ...+.....+.++.
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~-~~~l~ldaGD~~~Gs~~~--~~~~g~~~~~~~n~ 78 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARA-KNPLFLDAGDVFQGTLYF--NQYRGLADRYFMHR 78 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHS-SSEEEEECSCCSSSSHHH--HHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhC-CCeEEEEcCCCCCCCHhH--hhhcchhHHHHHHh
Confidence 478999999986421 11 2234444431 335788999999542110 00011122233333
Q ss_pred hhccCCeEeCCCCCccccCCCC-C---CcccCcccce-eeeC-CCCCCCCCCCcEEEEEeCcEE--EEEEcccC------
Q 045849 179 SAAYQPWIWTAGNHEIDFYPEI-G---ETVPFKPYSH-RYHV-PYRASGSTAPFWYSIKRASVY--IIVLSSYS------ 244 (320)
Q Consensus 179 ~~~~~P~~~~~GNHD~~~~~~~-~---~~~~~~~~~~-~f~~-p~~~~~~~~~~~ys~~~g~v~--fi~lds~~------ 244 (320)
+ -.=+.++||||+.+.... . ....+ .+.. .... ..+........|...+.++++ ||++-+..
T Consensus 79 ~---gyDa~~~GNHEfd~G~~~l~~~~~~~~~-p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~ 154 (302)
T d2z1aa2 79 L---RYRAMALGNHEFDLGPGPLADFLKGARF-KVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISN 154 (302)
T ss_dssp T---TCCEEECCGGGGTTCHHHHHHHHTTCCS-EEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSC
T ss_pred c---ccccccccchhhhcChhHHHHHhhhccc-ceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccccccc
Confidence 2 233668999999753210 0 00000 0000 0000 000001123346677888855 55554421
Q ss_pred ---C--CCCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 245 ---A--YGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 245 ---~--~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
. +....+..++..+.|++ .+.+-+|++.|..... =..+.++. +||++++||.|..
T Consensus 155 ~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~~---------------d~~la~~~~giD~ii~gh~h~~ 215 (302)
T d2z1aa2 155 PGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE---------------DLKLARRLVGVQVIVGGHSHTL 215 (302)
T ss_dssp CCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH---------------HHHHHTTCSSCCEEEECSSCCC
T ss_pred ccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcch---------------hhHHHhcCCCeeeeecCcccee
Confidence 0 01112334444445544 3566799999975311 11233343 7999999999964
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.89 E-value=3.2e-05 Score=53.36 Aligned_cols=82 Identities=17% Similarity=0.101 Sum_probs=48.4
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----C-CeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----T-NTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~-~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+.-- ..++++|+|.-..... . ..++|............... ......|+||+|++.
T Consensus 3 ~P~~~~v~~~--~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~-----------~~~~~~v~~L~p~t~ 69 (96)
T d1x5xa1 3 MPASPVLTKA--GITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDG-----------EDLAYTVKNLRRSTK 69 (96)
T ss_dssp CCCCCEEEEE--CSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEE-----------SCSEEEEESCCSSCE
T ss_pred cCCCCEEEEe--cCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeecC-----------CCCEEEECCCCCCCE
Confidence 4556666543 3589999998643221 1 23444433332222211110 012367899999999
Q ss_pred EEEEeCc------CCceeeEEEECCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
|.+||.. +.+|+...|+|.|
T Consensus 70 Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 70 YKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 9999964 2367788899976
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.88 E-value=2.3e-05 Score=54.07 Aligned_cols=69 Identities=22% Similarity=0.220 Sum_probs=45.5
Q ss_pred CCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc------C
Q 045849 29 GKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI------G 98 (320)
Q Consensus 29 ~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~------~ 98 (320)
.+++.|+|....... ...|+|............+. ....+|++|+|++.|.+||.. +
T Consensus 14 ~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~V~A~n~~G~s 80 (93)
T d1x4xa1 14 ATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCRVQALSVVGAG 80 (93)
T ss_dssp TTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEEEEEECSSCCC
T ss_pred CCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEEEEEEECCcCc
Confidence 479999998654322 24566766554333222211 123568999999999999954 3
Q ss_pred CceeeEEEECCC
Q 045849 99 HTERQFWFVTPP 110 (320)
Q Consensus 99 ~~s~~~~F~t~p 110 (320)
.+|+...|+|+|
T Consensus 81 ~~S~~~~~~Tpp 92 (93)
T d1x4xa1 81 PFSEVVACVTPP 92 (93)
T ss_dssp CBCCCEEEECCC
T ss_pred CCCCcEEEEeCC
Confidence 577888999976
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=5.8e-05 Score=51.70 Aligned_cols=82 Identities=16% Similarity=0.198 Sum_probs=54.6
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+.+..-. ++++.|+|.-.... ....|+|.............. .....+.|++|+|+|.|.+
T Consensus 3 ~aP~n~~~~~~s--~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 69 (92)
T d1qg3a1 3 GAPQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEM 69 (92)
T ss_dssp CCCEEEEEEECS--TTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEcc--CCEEEEEEEecCCCccceEEeeeeccccccEEEEec-----------CCccEEEECCCCCCcEEEE
Confidence 478888777543 58999999976432 345677876654322221111 1123577999999999999
Q ss_pred EeCc------CCceeeEEEECC
Q 045849 94 VVGI------GHTERQFWFVTP 109 (320)
Q Consensus 94 ~v~~------~~~s~~~~F~t~ 109 (320)
||.. +.+|+...|+|.
T Consensus 70 ~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 70 KVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEEEECSSCBCCCCCCEEEECC
T ss_pred EEEEEeCCcCcCCCCCEEEEcC
Confidence 9964 357778888884
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.86 E-value=8.6e-05 Score=52.58 Aligned_cols=88 Identities=20% Similarity=0.363 Sum_probs=55.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+.+.......+++.|+|.-..... ...|.|....+...... ..... ..-.....|.+|+|++.
T Consensus 13 ~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~~L~p~t~ 84 (111)
T d1x5ka1 13 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPV------VGNRLTHQIQELTLDTP 84 (111)
T ss_dssp SCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTS--EEEEE------STTCSEEEECSCCSSSE
T ss_pred CCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCccee--EEEEe------CCCeeEEEECCCCCCCE
Confidence 36888888776656789999999654322 23556665443221100 00010 11122467999999999
Q ss_pred EEEEeCc------CCceeeEEEECCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
|.+||.. +.+|+...|+|+.
T Consensus 85 Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 85 YYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp EEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 9999964 3578888999964
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.80 E-value=3.2e-05 Score=53.56 Aligned_cols=83 Identities=14% Similarity=0.181 Sum_probs=50.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCC-CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVD-EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
..|..+.+.-.. .++++|+|.-.. ......+.|...-...... .. ... . ...++|+||+|+|.|.+
T Consensus 4 ~~p~~L~~~~~~--~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~--~~--~~~-~------~t~~~i~~L~p~t~Y~~ 70 (94)
T d1x5aa1 4 LSGLSLKLVKKE--PRQLELTWAGSRPRNPGGNLSYELHVLNQDEE--WH--QMV-L------EPRVLLTKLQPDTTYIV 70 (94)
T ss_dssp CCSCCCCEEEEE--TTEEEEECCCCCSSCCSSCCEEEEEEECSSCE--EE--EEE-S------SSEEEEESCCSSCEEEE
T ss_pred CCCCceEEEEcC--CCEEEEEEecccCCCCCcEEEEEEEEecCCce--EE--Eee-c------cCEEEECCCCCCCEEEE
Confidence 367677776554 589999998653 1222334444321100000 00 000 0 12467999999999999
Q ss_pred EeCc------CCceeeEEEECCC
Q 045849 94 VVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 94 ~v~~------~~~s~~~~F~t~p 110 (320)
||.. |.+|+...|+|.|
T Consensus 71 rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 71 RVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEcCCcCcCCCCCEEEEeCC
Confidence 9954 4578999999976
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.80 E-value=4.3e-05 Score=53.23 Aligned_cols=85 Identities=19% Similarity=0.276 Sum_probs=51.8
Q ss_pred CCCCCCCccEEEEeeCCCCCcEEEEEEeCCC-----CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCC
Q 045849 11 PPGYNAPQQVHITQGDLVGKAVIVSWVTVDE-----PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHL 85 (320)
Q Consensus 11 ~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 85 (320)
|++...|-++. +....++++|+|.-... .....|+|.......+..+. . .. ....+|++|
T Consensus 1 PP~p~~pp~~~---~~~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~------~----~~--~~~~~v~~L 65 (97)
T d2crza1 1 PPGPCLPPRLQ---GRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY------Q----GS--EVECTVSSL 65 (97)
T ss_dssp CCCCCCCCEEC---SCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE------E----ES--CSEEEEESC
T ss_pred CcCcCCCCEEe---eeeeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEee------c----CC--ceEEEEcCC
Confidence 45544554432 23345899999985432 12356677665543332221 0 01 123678999
Q ss_pred CCCCEEEEEeCc------CCceeeEEEECCC
Q 045849 86 EFNTKYYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 86 ~p~t~Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
+|++.|.|||.. +.+|+...++|+|
T Consensus 66 ~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 66 LPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp CTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 999999999964 3567888888875
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.76 E-value=4.9e-05 Score=53.60 Aligned_cols=92 Identities=11% Similarity=0.151 Sum_probs=56.5
Q ss_pred CccccCCCCCC-CCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEE----eccCCCCceEEEEEEEEEEeccccceEEEE
Q 045849 5 ADVFQVPPGYN-APQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVY----WSENSEQKEQAEGKVYTYKYYNYTSGYIHH 79 (320)
Q Consensus 5 ~~~~~~~~~~~-~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (320)
++||+.+++.- .|..+.+.-.. .++++|+|.-..........| .............. .....
T Consensus 1 s~vf~T~~~~P~~P~~~~~~~~~--~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~~-----------~~~~~ 67 (105)
T d1x3da1 1 AEIFTTLSCEPDIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM-----------GSQKQ 67 (105)
T ss_dssp CCCCCCCCSCCCCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE-----------ESCSE
T ss_pred CeeEECCCCCCcCCCCCEEEEcc--CCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEec-----------CCccE
Confidence 46777666533 68888887544 589999998765433343344 33322211111110 01124
Q ss_pred EEecCCCCCCEEEEEeCc------CCceeeEEEECC
Q 045849 80 CTIRHLEFNTKYYYVVGI------GHTERQFWFVTP 109 (320)
Q Consensus 80 ~~l~~L~p~t~Y~Y~v~~------~~~s~~~~F~t~ 109 (320)
..+.+|+|++.|.+||.. +.+|+...|+|.
T Consensus 68 ~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 68 FKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred EEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 568899999999999974 357788888884
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.72 E-value=6.2e-05 Score=52.00 Aligned_cols=83 Identities=20% Similarity=0.243 Sum_probs=54.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCCCc-eEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSEQK-EQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
+|.++.++......+++.|+|...... ..-.|+|....+... ... .. ..-...++|+||+||+.|.
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~~-----~v------~~~~~~~~l~gL~P~t~Y~ 70 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA-----TI------PGHLNSYTIKGLKPGVVYE 70 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEE-----EE------CSSCCEEEECSCCSSEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeeee-----cc------CCCccEEEECCcccCcEEE
Confidence 688888887766668999999986421 335778876544321 111 11 1123357899999999999
Q ss_pred EEeCc---CCce--eeEEEECC
Q 045849 93 YVVGI---GHTE--RQFWFVTP 109 (320)
Q Consensus 93 Y~v~~---~~~s--~~~~F~t~ 109 (320)
.+|.. .+.+ ....|+|.
T Consensus 71 v~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 71 GQLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp EEEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEEeCCCccCcEEEEEEec
Confidence 99965 2333 35677764
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.69 E-value=3.8e-05 Score=53.80 Aligned_cols=85 Identities=15% Similarity=0.109 Sum_probs=50.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC-----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG-----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|....+.. .+++++|.|.-....+ .-.|+|....+..+........ .......+.|+||+|++.
T Consensus 5 ~P~~~~~~~---~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~L~p~t~ 74 (101)
T d2haza1 5 SPSIDQVEP---YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK-------EASMEGIVTIVGLKPETT 74 (101)
T ss_dssp CCEEEEEEE---CSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHH-------HHHHHSEEEECSCCTTCE
T ss_pred CCccCEEEe---eCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeee-------cccceeEEEecCCCCCeE
Confidence 674333333 3478999999753221 2456776655432222111100 011112478999999999
Q ss_pred EEEEeCc------CCceeeEEEECCC
Q 045849 91 YYYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~------~~~s~~~~F~t~p 110 (320)
|.+||.. +.+|+...|+|.|
T Consensus 75 Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 75 YAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 9999964 3577888999976
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.69 E-value=9.4e-05 Score=51.71 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=52.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC------CCeEEEeccCCCC-ceEEEEEEEEEEeccccceEEEEEEecCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG------TNTVVYWSENSEQ-KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 87 (320)
.+|..+++..-. ++++.|+|....... ...|+|....+.. ....... ......+.|.+|+|
T Consensus 4 ~pP~~l~v~~~~--~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~L~p 71 (104)
T d2b5ib2 4 MAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTL----------KQKQEWICLETLTP 71 (104)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEE----------CSCCCEEEECSCCT
T ss_pred CCCCCcEEEEEe--CCEEEEEEccccccccccceeEEEEEEecccccceeeeEEec----------CCCcEEEEECCCCC
Confidence 468888877654 579999998764221 1346665554321 1111000 11123467899999
Q ss_pred CCEEEEEeCc-------C---CceeeEEEECCC
Q 045849 88 NTKYYYVVGI-------G---HTERQFWFVTPP 110 (320)
Q Consensus 88 ~t~Y~Y~v~~-------~---~~s~~~~F~t~p 110 (320)
+|.|.+||.. + .||+...|+|.|
T Consensus 72 ~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 72 DTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp TCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred CCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 9999999964 1 357788999976
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.69 E-value=0.00012 Score=51.74 Aligned_cols=83 Identities=20% Similarity=0.232 Sum_probs=52.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-C----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-G----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|..+.+.... .++|+|+|.-.... . ...|.|............. .......++|++|.|++.
T Consensus 13 ~P~~l~~~~~~--~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~L~p~t~ 80 (107)
T d1x5fa1 13 APRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT----------SHPGEMQVTIQNLMPATV 80 (107)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEEC----------SSTTCSEEEECSCCTTCE
T ss_pred CCCccEEEEec--CCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEE----------eCCCccEEEecCCCCCCE
Confidence 68777776554 58999999864211 1 2356666544332222110 111234588999999999
Q ss_pred EEEEeCcC------CceeeEEEECCC
Q 045849 91 YYYVVGIG------HTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~~------~~s~~~~F~t~p 110 (320)
|.+||..- .+|....++|.|
T Consensus 81 Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 81 YIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 99999642 356777888865
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.68 E-value=0.00043 Score=46.95 Aligned_cols=73 Identities=18% Similarity=0.222 Sum_probs=47.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+.+.--. +++++|+|.-.... ....|+|....+.......... ...-...+.|+||+|+|.|.+
T Consensus 2 daP~~l~v~~~~--~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~~--------~~~~~~~~~i~~L~p~t~Y~~ 71 (92)
T d1tdqa2 2 DAPKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPK--------GIGPTTKTTLTDLVPGTEYGV 71 (92)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEEC--------CSSSEEEEEECSCCTTCEEEE
T ss_pred ccCcCCEEEEec--CCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEEe--------cCCCeeEEEECCccCCCEEEE
Confidence 468877776543 58999999876533 3466778765543221111110 122345678999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 72 ~V~a 75 (92)
T d1tdqa2 72 GISA 75 (92)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.67 E-value=9.2e-05 Score=50.90 Aligned_cols=82 Identities=15% Similarity=0.263 Sum_probs=49.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCCCe----EEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGTNT----VVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
+|..+++.-.. .++++|.|.-........ |+|.............. .....+.|++|+|+|.|
T Consensus 3 ~~~~l~~~~~t--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y 69 (95)
T d2djsa1 3 TVPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVY 69 (95)
T ss_dssp CCSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEE
T ss_pred CCCccEEEeec--CCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEE
Confidence 34456665443 589999998764433333 44444433221111100 01124779999999999
Q ss_pred EEEeCc------CCceeeEEEECCC
Q 045849 92 YYVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t~p 110 (320)
.+||.. +.+|+...|+|.|
T Consensus 70 ~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 70 VVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 999964 2467788899976
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.66 E-value=4.3e-05 Score=53.59 Aligned_cols=82 Identities=15% Similarity=0.280 Sum_probs=49.4
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
..|..+.+... ..+++.|+|...... ..-.|+|............. . .. ....|+||+|+|.|.
T Consensus 12 ~~P~~~~~~~~--~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~~-------~---~~--~~~~i~~L~p~t~Y~ 77 (102)
T d1x5za1 12 GQPLNFKAEPE--SETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITI-------E---PG--TSYRLQGLKPNSLYY 77 (102)
T ss_dssp CCCEEEEEECS--SSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEE-------C---SS--SEEEEECCCTTCEEE
T ss_pred cCCCCeEEEEc--cCCEEEEEEECCCCCCccceEEEEEeCCCCceEEEEc-------C---Cc--CEEEECCCCCCCEEE
Confidence 36877776643 358999999875321 23455665543321111100 0 01 135689999999999
Q ss_pred EEeCc------CCceeeEEEECCC
Q 045849 93 YVVGI------GHTERQFWFVTPP 110 (320)
Q Consensus 93 Y~v~~------~~~s~~~~F~t~p 110 (320)
+||.. +.+|+...++|+.
T Consensus 78 ~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 78 FRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp ECEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCCEeCCCCCEEEEcCC
Confidence 99964 2356777888853
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.65 E-value=9.3e-05 Score=51.44 Aligned_cols=81 Identities=15% Similarity=0.239 Sum_probs=51.4
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+++.. ...++++|.|...... ....|+|...++....... .. ......+|++|+|++.|
T Consensus 6 ~p~~~~~~~--~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~--~~---------~~~~~~~i~~L~p~t~Y 72 (98)
T d1x5la1 6 QVVVIRQER--AGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST--LK---------AVTTRATVSGLKPGTRY 72 (98)
T ss_dssp CCCCEECSC--BCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE--EE---------ESSSEEEECSCCTTCEE
T ss_pred CCCceEEEe--ccCCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEE--ec---------CCceEEEECCCCCCCEE
Confidence 455655443 4468999999865432 2345777765443221110 00 11235679999999999
Q ss_pred EEEeCc------CCceeeEEEECC
Q 045849 92 YYVVGI------GHTERQFWFVTP 109 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t~ 109 (320)
.+||.. +.+|+...|+|.
T Consensus 73 ~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 73 VFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EECEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEEEcCCCCcCCCCCEEEEcC
Confidence 999964 357888899984
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=3e-05 Score=55.19 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=46.1
Q ss_pred ccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEE
Q 045849 6 DVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCT 81 (320)
Q Consensus 6 ~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
.|-.+|. +|..+.+.......+++.|+|......+ ...|+|...... +...... .......+.
T Consensus 6 ~v~~~P~---~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~-~~~~~~~---------~~~~~~~~~ 72 (108)
T d1wf5a1 6 RVRQLPH---APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAP-WTVLLAS---------VDPKATSVT 72 (108)
T ss_dssp SCCCCCC---CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCC-CEEEESS---------CCTTCCEEE
T ss_pred EEecCCC---CCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCC-ceEEeee---------ecCCccEEE
Confidence 3444555 5555555655556689999998754332 234556554432 1111110 011122467
Q ss_pred ecCCCCCCEEEEEeCc
Q 045849 82 IRHLEFNTKYYYVVGI 97 (320)
Q Consensus 82 l~~L~p~t~Y~Y~v~~ 97 (320)
|+||+|++.|.|||..
T Consensus 73 i~~L~p~t~Y~frV~A 88 (108)
T d1wf5a1 73 VKGLVPARSYQFRLCA 88 (108)
T ss_dssp EESCCTTCEEEEEEEE
T ss_pred ECCCCCCCEEEEEEEE
Confidence 8999999999999975
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.56 E-value=0.0003 Score=49.02 Aligned_cols=82 Identities=12% Similarity=0.063 Sum_probs=49.9
Q ss_pred CCCccEEEEee--CCCCCcEEEEEEeCCCC----C----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 15 NAPQQVHITQG--DLVGKAVIVSWVTVDEP----G----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 15 ~~p~~v~l~~~--~~~~~~~~v~W~t~~~~----~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
..|..+.+.+. ....++++|+|...... + ...|+|...+...+...... ......|.|
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~~------------~~~~~~i~~ 71 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTG------------HQTQFKVFD 71 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEEE------------TCSEEEECC
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeeccc------------ceeEEEeCC
Confidence 46777776543 44568899999986421 1 23555555554333322111 112478999
Q ss_pred CCCCCEEEEEeCc-------CCceeeEEEEC
Q 045849 85 LEFNTKYYYVVGI-------GHTERQFWFVT 108 (320)
Q Consensus 85 L~p~t~Y~Y~v~~-------~~~s~~~~F~t 108 (320)
|.||+.|.+||.. +.||+...++|
T Consensus 72 L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~ 102 (103)
T d1f6fb2 72 LYPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102 (103)
T ss_dssp CCTTCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred CCcceEEEEEEEEEeCCCCCCCCcCceeeEC
Confidence 9999999999964 24666666665
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.53 E-value=0.00012 Score=51.23 Aligned_cols=79 Identities=16% Similarity=0.244 Sum_probs=50.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+.+..-. ++++.|+|....... ...|+|...+.......... .....|+||+|+|.|
T Consensus 13 ~P~~l~v~~~s--~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y 77 (103)
T d1x5ga1 13 PAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTEY 77 (103)
T ss_dssp CCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCEE
T ss_pred cCCCcEEEEcc--CCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEecc-------------ccEEecCCCCCCCEE
Confidence 67777777544 479999998654221 24567766554332222111 123679999999999
Q ss_pred EEEeCc------CCceeeEEEECC
Q 045849 92 YYVVGI------GHTERQFWFVTP 109 (320)
Q Consensus 92 ~Y~v~~------~~~s~~~~F~t~ 109 (320)
.++|.. |.+|+...++|.
T Consensus 78 ~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 78 SFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEEEcCCcCcCCCCCEEEEcC
Confidence 999964 235666677774
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.51 E-value=4.6e-05 Score=61.40 Aligned_cols=65 Identities=26% Similarity=0.323 Sum_probs=40.8
Q ss_pred EEEEEEcCCCCCCcHHH-HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVT-LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|+.++||+|........ |+++... .+.|.++++||+++.+. +. .+.++ +....-+.++.||||..
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~-~~~d~lv~lGD~vDrGp----~s------~~vl~-~l~~~~~~~i~GNHE~~ 79 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFD-NKKDLLISVGDLVDRGA----EN------VECLE-LITFPWFRAVRGNHEQM 79 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCC-TTTCEEEECSCCSSSSS----CH------HHHHG-GGGSTTEEECCCHHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCC-CCCCEEEEeCCccccCc----cH------HHHHH-HhhccccccccCcHHHH
Confidence 78999999976443332 3333222 36689999999997542 11 11222 22345688999999974
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00052 Score=47.66 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=47.1
Q ss_pred CCCccEEEEee--CCCCCcEEEEEEeCCCC----CCC----eEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 15 NAPQQVHITQG--DLVGKAVIVSWVTVDEP----GTN----TVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 15 ~~p~~v~l~~~--~~~~~~~~v~W~t~~~~----~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
..|..+.+..- +...+++.|+|...... ... .++|....+........ .....++|.+
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~ 71 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFA------------GQQTEFKILS 71 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEEE------------ETCSEEEECC
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeecc------------ccccEEEECC
Confidence 36777777643 34568899999976321 122 34444444322221110 1122467899
Q ss_pred CCCCCEEEEEeCc-------CCceeeEEEECC
Q 045849 85 LEFNTKYYYVVGI-------GHTERQFWFVTP 109 (320)
Q Consensus 85 L~p~t~Y~Y~v~~-------~~~s~~~~F~t~ 109 (320)
|+|+|.|.+||.. +.||+...++|+
T Consensus 72 L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 72 LHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp --CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 9999999999964 247788888874
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00029 Score=48.17 Aligned_cols=84 Identities=13% Similarity=0.188 Sum_probs=51.6
Q ss_pred CCCCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 13 GYNAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 13 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
|..+|..+.+. +-..+++.|+|...... ....|.|...... ... ... ........|+||+|||.|
T Consensus 1 gl~~P~~l~~~--~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~-~~~-----~~~------~~~~~~~~i~~L~p~t~Y 66 (93)
T d2cuma1 1 GLEAPRDLEAK--EVTPRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQE-----ILL------PGGITSHQLLGLFPSTSY 66 (93)
T ss_dssp TCCCCEEEEEE--SCCSSCEEEEEECCSSCCSEEEEEEECTTSC-EEE-----EEE------CSSCSEEEECSCCTTCEE
T ss_pred CcCcCCCCEEE--EeCCCEEEEEEEccccccccEEEEEEccccc-cEE-----EEE------CCCccEEEEeCccCCCEE
Confidence 45678766655 34468999999976533 3467778765432 111 111 011234679999999999
Q ss_pred EEEeCcC---Cce--eeEEEECCC
Q 045849 92 YYVVGIG---HTE--RQFWFVTPP 110 (320)
Q Consensus 92 ~Y~v~~~---~~s--~~~~F~t~p 110 (320)
.++|..- +.+ ....|+|..
T Consensus 67 ~~~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 67 NARLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp EEEEEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEEEEeCCCCCCCEEEEEEeCC
Confidence 9999652 222 345677743
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.43 E-value=0.00056 Score=47.80 Aligned_cols=84 Identities=20% Similarity=0.266 Sum_probs=51.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-C----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-G----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
..|..+.+..... .+++.|.|...... . ...|+|.......... ..... .. ...+.|.+|+|+|
T Consensus 6 dPP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~----~~~~~----~~--~t~~~i~~L~p~t 74 (105)
T d1erna2 6 DAPVGLVARLADE-SGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQ----RVEIL----EG--RTECVLSNLRGRT 74 (105)
T ss_dssp CCCEEEEEEECCC--CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEE----EEEEC----TT--CCEEEECSCCSSC
T ss_pred CCCCCCEEEEecC-CCcEEEEeeeccccccceEEEEEEEEecCCCCCceE----EEeec----CC--ccEEEEeCCCCCc
Confidence 4788898887764 47899999975322 1 2356666554322111 11100 01 1246799999999
Q ss_pred EEEEEeCc--------C---CceeeEEEECC
Q 045849 90 KYYYVVGI--------G---HTERQFWFVTP 109 (320)
Q Consensus 90 ~Y~Y~v~~--------~---~~s~~~~F~t~ 109 (320)
.|.+||.. | .||...+++|+
T Consensus 75 ~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 75 RYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp EEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 99999964 1 36677777774
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.00058 Score=48.44 Aligned_cols=84 Identities=15% Similarity=0.218 Sum_probs=53.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRH 84 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (320)
..|..|+++... +++.|+|....... ...|+|............ .. ...-...+.+.+
T Consensus 7 ~pP~nl~v~~~~---~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~ 74 (114)
T d2gysa2 7 PEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAI-LL--------SNTSQATLGPEH 74 (114)
T ss_dssp CCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEE-EE--------ESSSEEEECTTT
T ss_pred CcCCCeEEEEeC---CEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEE-ee--------ccCceEEEEeCC
Confidence 378889887653 68999999864221 134666665543221111 10 011233578999
Q ss_pred CCCCCEEEEEeCc----C--------CceeeEEEECCC
Q 045849 85 LEFNTKYYYVVGI----G--------HTERQFWFVTPP 110 (320)
Q Consensus 85 L~p~t~Y~Y~v~~----~--------~~s~~~~F~t~p 110 (320)
|.|++.|.+||.. + .||+...|+|+|
T Consensus 75 L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~p 112 (114)
T d2gysa2 75 LMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQP 112 (114)
T ss_dssp CCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred CCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcC
Confidence 9999999999954 1 467889999976
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.00073 Score=45.68 Aligned_cols=71 Identities=13% Similarity=0.235 Sum_probs=45.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+++.- ...++++|+|.-.... ....|.|........... .... .-...+.|.||+|||.|.+
T Consensus 3 d~P~~l~v~~--~s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~----~~~~------~~~~~~~i~~L~p~t~Y~~ 70 (90)
T d1tena_ 3 DAPSQIEVKD--VTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTT----IDLT------EDENQYSIGNLKPDTEYEV 70 (90)
T ss_dssp CCCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEE----EEEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCCCcEEEE--ecCCEEEEEEEeCceEeccEEEEEEEcCCCceeEE----EEec------CCcceeeEeeecCCCEEEE
Confidence 4677777763 4568999999865433 345778876544321111 0111 1122478999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 71 ~V~a 74 (90)
T d1tena_ 71 SLIS 74 (90)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.38 E-value=0.00064 Score=45.95 Aligned_cols=76 Identities=21% Similarity=0.272 Sum_probs=45.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEe
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVV 95 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 95 (320)
+|..+.+.-- ..++++|+|.-... ......|....+.. .. +.. . . -...++||+|++.|.|||
T Consensus 6 ~P~~l~~~~~--~~~sv~lsW~~p~~-~~~i~~Y~i~~~~~-~~--~~~------~-~----t~~~~~~L~p~t~Y~~~V 68 (88)
T d1k85a_ 6 APTNLASTAQ--TTSSITLSWTASTD-NVGVTGYDVYNGTA-LA--TTV------T-G----TTATISGLAADTSYTFTV 68 (88)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCSC-CSSEEEEEEEESSS-EE--EEE------S-S----SEEEECCCCSSCEEEEEE
T ss_pred CCCCcEEEEe--cCCEEEEEEeCCCC-CCCEEEEEEEccce-EE--Eec------C-C----CEEEECCCCCCCEEEEEE
Confidence 6777777643 35899999975432 23555665542211 11 110 0 1 135789999999999999
Q ss_pred Cc----C---CceeeEEEEC
Q 045849 96 GI----G---HTERQFWFVT 108 (320)
Q Consensus 96 ~~----~---~~s~~~~F~t 108 (320)
.. | .+|+...++|
T Consensus 69 ~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 69 KAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEEETTTEECCCCCCEEEEC
T ss_pred EEEECCCCcCCCCcCEEEEC
Confidence 64 1 2345555554
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.37 E-value=0.00061 Score=47.16 Aligned_cols=85 Identities=13% Similarity=0.191 Sum_probs=52.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC------CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP------GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
.+|..+++.... .++++|.|...... ..-.|.|....+.......-... ........|.+|+|+
T Consensus 3 ~~P~~~~~~~~s--~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~--------~~~~~~~~i~~L~p~ 72 (101)
T d1x4ya1 3 AGPYITFTDAVN--ETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMV--------EGDRYWHSISHLQPE 72 (101)
T ss_dssp SCCEEEEEECSS--SSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEE--------ETTCCEEEECSCCTT
T ss_pred CCCcccEEEEEc--CCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEE--------cCCeeEEEEcCCCCC
Confidence 478777777654 58999999864211 12357777654432111100000 011224568999999
Q ss_pred CEEEEEeCc------CCceeeEEEECC
Q 045849 89 TKYYYVVGI------GHTERQFWFVTP 109 (320)
Q Consensus 89 t~Y~Y~v~~------~~~s~~~~F~t~ 109 (320)
+.|.+||.. +.+|+...++|.
T Consensus 73 t~Y~~~v~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 73 TSYDIKMQCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp CEEEEEEEEECTTCCCCCCCCEEEECC
T ss_pred CEEEEEEEEEcCCCCCCCCCcEEEEcc
Confidence 999999964 357888888885
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00047 Score=46.59 Aligned_cols=71 Identities=13% Similarity=0.225 Sum_probs=45.4
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|.++.++ +-..++++|+|.-.... ....|+|........... .... .-...+.|++|+|++.|.+
T Consensus 2 d~P~~l~v~--~vt~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~----~~v~------~~~~~~~i~~L~p~t~Y~~ 69 (89)
T d1fnfa3 2 DSPTGIDFS--DITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE----DRVP------HSRNSITLTNLTPGTEYVV 69 (89)
T ss_dssp CCCEEEEEE--SCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEE----EEEE------TTCCEEEEESCCTTCEEEE
T ss_pred ccCcCCEEE--EecCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEE----EEEC------CCccEEEECCCcccCEEEE
Confidence 467776665 44578999999976433 345678877654322111 0111 1123468999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 70 ~V~a 73 (89)
T d1fnfa3 70 SIVA 73 (89)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.34 E-value=0.0009 Score=45.57 Aligned_cols=71 Identities=13% Similarity=0.257 Sum_probs=45.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+.+.--. .++++|+|.-.... ....|.|.......... .... ......++|+||+||++|.+
T Consensus 5 ~~P~~l~v~~v~--~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~------~~~~----~~~~~~~~i~~L~p~t~Y~v 72 (93)
T d1tdqa1 5 DGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT------TFRL----QPPLSQYSVQALRPGSRYEV 72 (93)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCCE------EEEE----CTTCSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEeC--CCEEEEEEEccccCCCceEEEEEeccCcceee------EEEe----CCCceEEEEeCcccceEEEE
Confidence 478888777654 57999999865443 34567777655422111 0110 01122468999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 73 ~V~a 76 (93)
T d1tdqa1 73 SISA 76 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.00055 Score=47.38 Aligned_cols=73 Identities=22% Similarity=0.293 Sum_probs=38.6
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC-------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG-------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEF 87 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~-------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 87 (320)
.+|..|.+... ..++++|+|....... ...|+|....+....... .. . .......+.|.+|+|
T Consensus 3 ~~P~~l~v~~~--~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~-~~-~------~~~~~~~~~i~~L~p 72 (101)
T d1iarb2 3 RAPGNLTVHTN--VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIY-NV-T------YLEPSLRIAASTLKS 72 (101)
T ss_dssp CCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEE-EE-C------SSCCEEEECC-----
T ss_pred ccCCcCEEEEE--eCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeee-ee-c------cCccceEEEECCCCC
Confidence 36776766544 4579999999763221 136777766544332211 10 0 122234678999999
Q ss_pred CCEEEEEeCc
Q 045849 88 NTKYYYVVGI 97 (320)
Q Consensus 88 ~t~Y~Y~v~~ 97 (320)
+|.|.+||..
T Consensus 73 ~t~Y~~rVrA 82 (101)
T d1iarb2 73 GISYRARVRA 82 (101)
T ss_dssp CCCEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999964
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.0007 Score=49.01 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=48.5
Q ss_pred CCCCccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCCCC----CeEEEeccCCCCceEEEEEEEEEEeccccceEE
Q 045849 2 PLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGT----NTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYI 77 (320)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (320)
|.-+.+..+|. .|..|.+..-. .++++|.|.-...... ..++|............-... ...
T Consensus 8 p~~~~v~d~P~---~P~~~~v~~~~--~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 73 (127)
T d1ueya_ 8 PTPAPVYDVPN---PPFDLELTDQL--DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV---------SGT 73 (127)
T ss_dssp CCCCCCCCSCC---CCEEEEEECCS--SSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEE---------ESS
T ss_pred CccccccccCc---CCCCcEEEEec--CCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEeec---------CCc
Confidence 45567777775 68887776543 5899999986543322 344444443322211111100 112
Q ss_pred EEEEecCCCCCCEEEEEeCc
Q 045849 78 HHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 78 ~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
....|.+|+|++.|.+||..
T Consensus 74 ~~~~i~~L~p~t~Y~frV~A 93 (127)
T d1ueya_ 74 QTTAQLNLSPYVNYSFRVMA 93 (127)
T ss_dssp CCEEEECCCTTCEECCEEEE
T ss_pred eEEEECCCccCCEEEEEEEE
Confidence 23567899999999999964
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00024 Score=49.16 Aligned_cols=82 Identities=15% Similarity=0.103 Sum_probs=48.6
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC--------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG--------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLE 86 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 86 (320)
..|..|.+.-- .++++.|+|....... .-.|+|...+........- ......+.|.||+
T Consensus 3 ~pP~~v~~~~~--s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~ 69 (100)
T d1x5ja1 3 MPPVGVQASIL--SHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA-----------NATTLSYLVTGLK 69 (100)
T ss_dssp CCCEEEEEEEE--ETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEEC-----------CBCSSEEEEESCC
T ss_pred CCCcCeEEEEe--cCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEec-----------CCCccEEEECCCC
Confidence 35776666644 3689999998642111 1245555544322211110 0011246799999
Q ss_pred CCCEEEEEeCc------CCceeeEEEECC
Q 045849 87 FNTKYYYVVGI------GHTERQFWFVTP 109 (320)
Q Consensus 87 p~t~Y~Y~v~~------~~~s~~~~F~t~ 109 (320)
|+|.|.+||.. +.+|....++|.
T Consensus 70 p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 70 PNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred CCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 99999999964 356777777774
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.23 E-value=0.0012 Score=44.40 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=44.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
+|..+.+.-- .+++++|+|...... ....|+|............ .. .-...+.|+||+|++.|.++
T Consensus 3 ~P~~l~v~~v--~~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~ 69 (88)
T d1qr4a2 3 SPKGISFSDI--TENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----VD------GSKTRTKLVKLVPGVDYNVN 69 (88)
T ss_dssp CCSCEEEESC--CSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----EE------TTCCEEEECSCCSSCEEEEE
T ss_pred CCcceEEEEe--cCCEEEEEEEcccEeeceEEEEEEeccCCceEEEE-----ec------CCccEEEECCCCCCCEEEEE
Confidence 6777666544 468999999866433 3457778776543322211 11 11124789999999999999
Q ss_pred eCc
Q 045849 95 VGI 97 (320)
Q Consensus 95 v~~ 97 (320)
|..
T Consensus 70 V~a 72 (88)
T d1qr4a2 70 IIS 72 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.00082 Score=45.81 Aligned_cols=81 Identities=23% Similarity=0.305 Sum_probs=48.9
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
+|..+.+. ....++++|.|......+ .-.|+|....+...... . . ..-.....|++|+|++.|
T Consensus 3 ~P~~~~~~--~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~--~---~------~~~~~~~~i~~L~p~t~Y 69 (93)
T d2vkwa2 3 APKLEGQM--GEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI--R---L------PSGSDHVMLKSLDWNAEY 69 (93)
T ss_dssp CCEEEEEE--CTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE--E---E------CTTCCEEEECSCCTTCEE
T ss_pred CCccCEeE--EcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeee--e---c------cCCceEEEEeccccceEE
Confidence 56555444 344689999999875432 35677776654321111 0 0 011124679999999999
Q ss_pred EEEeCcC---Cc--eeeEEEECC
Q 045849 92 YYVVGIG---HT--ERQFWFVTP 109 (320)
Q Consensus 92 ~Y~v~~~---~~--s~~~~F~t~ 109 (320)
.+||..- +. .....|+|.
T Consensus 70 ~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 70 EVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEEEEEETTEECCCEEEEEECC
T ss_pred EEEEEEEcCCCCcCCEeEEEEec
Confidence 9999752 22 235678874
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00042 Score=48.62 Aligned_cols=86 Identities=16% Similarity=0.181 Sum_probs=51.3
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..|.+.... ++++.|.|....... ...|+|............. ... ..........|.+|+|+|
T Consensus 11 pP~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~i~~L~p~t 82 (109)
T d1va9a1 11 PPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSI--VEM----KATGDSEVYTLDNLKKFA 82 (109)
T ss_dssp CCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBC--CBC----CCCSSEEEEEEESCCSSC
T ss_pred CCcCcEEEEec--CCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeee--eEE----ecCCCeeEEEECCCCcce
Confidence 68778776543 689999999753211 2356676554322111000 000 011234467899999999
Q ss_pred EEEEEeCc------CCceeeEEEECC
Q 045849 90 KYYYVVGI------GHTERQFWFVTP 109 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~ 109 (320)
.|.+||.. +.+|....|+|.
T Consensus 83 ~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 83 QYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp CEEEEEEEEETTEECCCCCCEECCCC
T ss_pred EEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 99999964 346667677764
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00038 Score=49.06 Aligned_cols=86 Identities=12% Similarity=0.073 Sum_probs=51.8
Q ss_pred CCCCCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 13 GYNAPQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 13 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
+...|..+.+..+ .++++|+|.-.... ..-.|+|...... +....... ......+.|.+|.|+
T Consensus 7 ~~sPP~~~~~~~t---~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~---------~~~~~~~~i~~L~p~ 73 (108)
T d1v5ja_ 7 GLSPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEVLDPAV---------AGTETELLVPGLIKD 73 (108)
T ss_dssp CCCCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEEEEEEE---------CSSCCEEECCCCCTT
T ss_pred CCCcCCCeEEEEc---CCEEEEEEEecccCCCceeEEEEEeeeeeee-eeeccccc---------cceeeeEEEEeccCC
Confidence 3457877766543 47899999864322 2246777765432 22221110 112345779999999
Q ss_pred CEEEEEeCcC------CceeeEEEECCCC
Q 045849 89 TKYYYVVGIG------HTERQFWFVTPPE 111 (320)
Q Consensus 89 t~Y~Y~v~~~------~~s~~~~F~t~p~ 111 (320)
+.|.|||..- .+|+...++|...
T Consensus 74 t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 74 VLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp SCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred cEEEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 9999999752 3455556666543
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.19 E-value=0.00088 Score=46.75 Aligned_cols=72 Identities=13% Similarity=0.012 Sum_probs=44.7
Q ss_pred CCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc------C
Q 045849 29 GKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI------G 98 (320)
Q Consensus 29 ~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~------~ 98 (320)
.++++|+|.-..... ...|+|....+......... ...-....+|++|+|+|.|.+||.. |
T Consensus 20 ~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~frVra~n~~g~G 90 (105)
T d2d9qb2 20 AGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP---------LPLEALQYELCGLLPATAYTLQIRCIRWPLPG 90 (105)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE---------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCC
T ss_pred CCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeec---------ccCCcceeEEecccCCeEEEEEEEEEeCCCCC
Confidence 578999999653222 35667776543322111111 0122445789999999999999953 2
Q ss_pred ---CceeeEEEECC
Q 045849 99 ---HTERQFWFVTP 109 (320)
Q Consensus 99 ---~~s~~~~F~t~ 109 (320)
.||...+++|.
T Consensus 91 ~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 91 HWSDWSPSLELRTT 104 (105)
T ss_dssp CCCCCCCCEEECCC
T ss_pred CCcCCCCCEEEeCC
Confidence 46777777763
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.19 E-value=0.0006 Score=45.86 Aligned_cols=68 Identities=12% Similarity=0.208 Sum_probs=44.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
+|..+++.- ...+++.|+|.-.... ....|+|....... .. .... .-.....|+||+||+.|.++
T Consensus 2 aP~~l~v~~--~t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~-~~-----~~~~------~~~~~~~~~~L~p~t~Y~v~ 67 (87)
T d1qr4a1 2 NPKDLEVSD--PTETTLSLRWRRPVAKFDRYRLTYVSPSGKK-NE-----MEIP------VDSTSFILRGLDAGTEYTIS 67 (87)
T ss_dssp CCEEEEEES--CCSSEEEEEEECCSSCCSEEEEEEECTTCCE-EE-----EEEC------TTCSEEEEESCCSSCEEEEE
T ss_pred cCcCcEEEE--ecCCEEEEEEECCCCCcceeEEEeecCCcce-eE-----EeCC------CCcCEEEECCCCcCCEEEEE
Confidence 677777663 3468999999976533 34577887654321 11 1111 11235789999999999999
Q ss_pred eCc
Q 045849 95 VGI 97 (320)
Q Consensus 95 v~~ 97 (320)
|..
T Consensus 68 V~a 70 (87)
T d1qr4a1 68 LVA 70 (87)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.18 E-value=0.00031 Score=50.00 Aligned_cols=88 Identities=14% Similarity=0.219 Sum_probs=53.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+.+...+...++++|.|.-..... ...|+|....+........ .........+.|++|.|++.
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~--------~~~~~~~~~~~i~~L~~~t~ 77 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP--------EDTASTRSSFTVQDLKPFTE 77 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG--------GGGCSCCSEEEECSCCSSEE
T ss_pred CCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecccc--------ccccccccEEeeCCCccCcE
Confidence 37878888766666789999998543222 2456666554432211100 00112234677999999999
Q ss_pred EEEEeCc----C-----CceeeEEEECCC
Q 045849 91 YYYVVGI----G-----HTERQFWFVTPP 110 (320)
Q Consensus 91 Y~Y~v~~----~-----~~s~~~~F~t~p 110 (320)
|.+||.. | .||....++|..
T Consensus 78 Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 78 YVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 9999953 2 245677888754
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.17 E-value=0.00072 Score=45.37 Aligned_cols=69 Identities=13% Similarity=0.289 Sum_probs=45.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+.++.-. .++++|.|.-.... ....|+|........ .. ... .-...+.|+||.|||.|.+
T Consensus 2 ~~P~nl~v~~~~--~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~-~~-----~~~------~~~~~~~~~~L~p~t~Y~v 67 (86)
T d1tdqa3 2 DSPRDLMVTASS--ETSISLIWTKASGPIDHYRITFTPSSGISS-EV-----TVP------RDRTSYTLTDLEPGAEYII 67 (86)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCCSCCSEEEEEEECSSSCCE-EE-----EEE------SSCSEEEECCCCTTCCEEE
T ss_pred ccCCCCEEEEec--CCEEEEEEeCCCCCccceEEEEecccccce-EE-----EeC------CCccEEEECCCccccEEEE
Confidence 468888777543 58999999886533 245778876543221 11 000 1112578999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 68 ~V~a 71 (86)
T d1tdqa3 68 SITA 71 (86)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.0011 Score=46.39 Aligned_cols=81 Identities=15% Similarity=0.015 Sum_probs=49.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC---C----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP---G----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~---~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
.|..+.+..-....+++.|+|...... . ...++|....+..+..+.. .-.....|.+|.|+
T Consensus 10 PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~~~ 77 (109)
T d1uc6a_ 10 PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL------------SNGTAHTITDAYAG 77 (109)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE------------SSCSEEEETTCCSS
T ss_pred CCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEecc------------CCceeEEeCCCCCC
Confidence 677888876554568999999986321 1 2345555544333222111 01124678999999
Q ss_pred CEEEEEeCcC--------CceeeEEEEC
Q 045849 89 TKYYYVVGIG--------HTERQFWFVT 108 (320)
Q Consensus 89 t~Y~Y~v~~~--------~~s~~~~F~t 108 (320)
|.|.+||... .||....++|
T Consensus 78 t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 78 KEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp SCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred CEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 9999999641 3566666654
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=97.15 E-value=0.0007 Score=46.80 Aligned_cols=70 Identities=13% Similarity=0.100 Sum_probs=42.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
+|..+.+..+. ++++|+|.-.... ....|+|................ . . .....+.+|+|++.|
T Consensus 8 ~P~~~~v~~~~---~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~----~---~~~~~~~~L~p~t~Y 75 (100)
T d1cfba1 8 APKLTGITCQA---DKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV--P----N---TDSSFVVQMSPWANY 75 (100)
T ss_dssp CCEEEEEEECS---SEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE--E----T---TCSEEEEECCSSEEE
T ss_pred cCcCcEEEEcC---CEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeec--C----C---ceEEEEecCCCCCEE
Confidence 78888877543 6899999865432 23467776654433222111111 0 0 112467799999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.+||..
T Consensus 76 ~frV~A 81 (100)
T d1cfba1 76 TFRVIA 81 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.0012 Score=45.08 Aligned_cols=73 Identities=19% Similarity=0.253 Sum_probs=45.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
..|..+++.-..+ .++++|+|.-.... ..-.|.|....+......+ ... ..-...+.|+||+|||.|.
T Consensus 3 ~PP~~l~v~~~~~-ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~---~~~------~~~~~~~~i~~L~p~t~Y~ 72 (94)
T d1fnfa1 3 SPPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE---EVV------HADQSSCTFDNLSPGLEYN 72 (94)
T ss_dssp CCCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEE---EEE------CTTCCEEECCCCCTTSCEE
T ss_pred CcCcCcEEEEecC-CCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEE---EEe------CCCccEEEECCCCCCCEEE
Confidence 3688888875443 35699999865432 3356778765433211111 111 1112358899999999999
Q ss_pred EEeCc
Q 045849 93 YVVGI 97 (320)
Q Consensus 93 Y~v~~ 97 (320)
.+|..
T Consensus 73 v~V~a 77 (94)
T d1fnfa1 73 VSVYT 77 (94)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.11 E-value=0.0026 Score=45.58 Aligned_cols=95 Identities=11% Similarity=0.124 Sum_probs=53.6
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEE--EEEEEEEEeccc---cceEEEEEEecCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQA--EGKVYTYKYYNY---TSGYIHHCTIRHL 85 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~l~~L 85 (320)
.+|..|.++.+ .+++.|+|.-.... ..-.|+|........... ......+..... ...-.....|.+|
T Consensus 9 ~aP~~v~v~~~---~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L 85 (123)
T d1wfta_ 9 GAPSTVRISKN---VDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDY 85 (123)
T ss_dssp CCCEEEEEEEC---SSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBC
T ss_pred cCCcccEEEeC---CCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCC
Confidence 47888887653 47899999965322 245677766544321100 000000000000 0000112468899
Q ss_pred CCCCEEEEEeCc------CCceeeEEEECCCCC
Q 045849 86 EFNTKYYYVVGI------GHTERQFWFVTPPEV 112 (320)
Q Consensus 86 ~p~t~Y~Y~v~~------~~~s~~~~F~t~p~~ 112 (320)
+|++.|.+||.. |.+|+...|+|....
T Consensus 86 ~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 86 TSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp SSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCS
T ss_pred CCCCEEEEEEEEecCCcCCCCCCcEEEEecCCC
Confidence 999999999964 356788889986543
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.0012 Score=45.66 Aligned_cols=83 Identities=19% Similarity=0.236 Sum_probs=51.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
+|.++++. +-..+++.|+|...... ..-.|+|...++... .. ... .-.....|+||+|||.|.++
T Consensus 3 ~P~~l~~~--~~t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~-~~-----~~~------~~~~~~~l~~L~p~t~Y~~~ 68 (102)
T d2cuha1 3 GPTQLRAL--NLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-QA-----ETP------GSAVDYPLHDLVLHTNYTAT 68 (102)
T ss_dssp SCEEEECC--CCSSSCEEEEEECCSSCCSEEEEEEECSSSCCE-EE-----EEE------TTCSEEEECSCCSSSEEEEE
T ss_pred CCCccEEE--EeCCCEEEEEEEeeeccceeeEEEEEeccccce-ee-----eee------eeeeeEEEccEEeeEEEEEE
Confidence 57666654 44568999999876433 346777776543211 11 111 01124779999999999999
Q ss_pred eCcC---C--ceeeEEEECCCCC
Q 045849 95 VGIG---H--TERQFWFVTPPEV 112 (320)
Q Consensus 95 v~~~---~--~s~~~~F~t~p~~ 112 (320)
|..- + ......|+|.+.+
T Consensus 69 V~a~~~~~~s~~~~~~~~T~~~~ 91 (102)
T d2cuha1 69 VRGLRGPNLTSPASITFTTGLEA 91 (102)
T ss_dssp EEEEETTEECCCEEEEEESCCCC
T ss_pred EEEEeCCCCcCCEEEEEECCCCC
Confidence 9741 2 2235578887643
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.10 E-value=0.0012 Score=46.18 Aligned_cols=71 Identities=8% Similarity=0.001 Sum_probs=44.1
Q ss_pred CCCcEEEEEEeCCCCC----CCeEEEeccCCC-CceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc-----
Q 045849 28 VGKAVIVSWVTVDEPG----TNTVVYWSENSE-QKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI----- 97 (320)
Q Consensus 28 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~----- 97 (320)
..+++.|.|....... ...|+|....+. .+..+.-. ..-....+|++|.|+|.|.+||..
T Consensus 20 ~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~----------~~~~~~~~l~~L~p~t~Y~frVra~~~~g 89 (106)
T d1cd9b2 20 QPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL----------PSSKDQFELCGLHQAPVYTLQMRCIRSSL 89 (106)
T ss_dssp CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE----------ESCEEEEEECCCCSCSCEEEEEEEEESSS
T ss_pred CCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeecc----------cCCceEEEEeccCCCeEEEEEEEEEeCCC
Confidence 3578999998654332 237788764432 33332211 112344679999999999999964
Q ss_pred -C---CceeeEEEEC
Q 045849 98 -G---HTERQFWFVT 108 (320)
Q Consensus 98 -~---~~s~~~~F~t 108 (320)
| .||...+|+|
T Consensus 90 ~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 90 PGFWSPWSPGLQLRP 104 (106)
T ss_dssp CCCCCCCCCCEEECC
T ss_pred CCCCcCCCCCeEecC
Confidence 2 3566677765
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.08 E-value=0.00074 Score=46.35 Aligned_cols=69 Identities=13% Similarity=0.205 Sum_probs=46.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
.+|..+.+.... .+++.|+|...... -...|+|....+....... . ......+|.+|.|++.|.
T Consensus 4 ~~P~nl~v~~~~--~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~-----------~~~~~~~~~~L~p~t~Y~ 69 (95)
T d2b5ic1 4 WAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-V-----------DYRHKFSLPSVDGQKRYT 69 (95)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-E-----------CSSCEEEECSCCTTSCEE
T ss_pred cCCCCCEEEEEe--CCEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-e-----------cccceeEcCCCCCCCEEE
Confidence 378888887554 47999999976422 2467788776654332211 1 012357889999999999
Q ss_pred EEeCc
Q 045849 93 YVVGI 97 (320)
Q Consensus 93 Y~v~~ 97 (320)
+||..
T Consensus 70 frVRa 74 (95)
T d2b5ic1 70 FRVRS 74 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.07 E-value=0.00047 Score=47.68 Aligned_cols=70 Identities=20% Similarity=0.201 Sum_probs=43.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|..+.+.--. .++++|+|.-.... ....|+|...++..+..+.. ...-...++|+||+||+.
T Consensus 4 ~P~~~~v~~~~--~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~----------~~~~~~~~~v~~L~~~~~ 71 (98)
T d1x5ya1 4 APQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGAR 71 (98)
T ss_dssp CCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTCC
T ss_pred CCcCcEEEEcc--CCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeee----------ecCceeEEEECCCcCCeE
Confidence 68777776433 57999999854321 23567777665443322110 011112467899999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.|||..
T Consensus 72 Y~frV~A 78 (98)
T d1x5ya1 72 ILFRVVG 78 (98)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999976
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.03 E-value=0.00042 Score=46.83 Aligned_cols=71 Identities=21% Similarity=0.241 Sum_probs=44.6
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|..+.+.--. .++++|+|.-.... ....|+|........... - ....-...+.|++|+||+.|.+
T Consensus 2 daP~nl~v~~~~--~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~L~p~t~Y~~ 69 (89)
T d1fnha3 2 DAPSNLRFLATT--PNSLLVSWQPPRARITGYIIKYEKPGSPPREVV-P---------RPRPGVTEATITGLEPGTEYTI 69 (89)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEECTTSCCEECT-T---------CCCTTCCEEEEESCCTTCEEEE
T ss_pred ccCcCCEEEEec--CCEEEEEEeCCCcCCceEEEEEeeccCCccEEE-E---------EcCCCccEEEEEeeeCCCEEEE
Confidence 468777776543 58999999975433 335777776543211000 0 0011123578999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 70 ~V~a 73 (89)
T d1fnha3 70 YVIA 73 (89)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.01 E-value=0.0013 Score=44.90 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=41.8
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC-----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG-----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+ ..-.++++.|.|....... .-.|+|....+....... ... ........|+||+|+|.
T Consensus 9 ~P~~~~v--~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~----~~~-----~~~~~~~~i~~L~p~t~ 77 (95)
T d2ibga1 9 VPELLEI--EEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKA----TIE-----GAHARSFKIAPLETATM 77 (95)
T ss_dssp CCEECCC--BCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEE----EEE-----CTTCCEEEECSCCTTCE
T ss_pred CCcCeEE--EEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeee----ecc-----CCceeEEEEeeccCCeE
Confidence 4655544 4444689999998643221 236788765443211110 010 11133567999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.+||..
T Consensus 78 Y~~~V~A 84 (95)
T d2ibga1 78 YEFKLQS 84 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999965
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.97 E-value=0.00038 Score=48.95 Aligned_cols=82 Identities=15% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCccEEEEeeCC----CCCcEEEEEEeCCCC----C----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEec
Q 045849 16 APQQVHITQGDL----VGKAVIVSWVTVDEP----G----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIR 83 (320)
Q Consensus 16 ~p~~v~l~~~~~----~~~~~~v~W~t~~~~----~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (320)
.|..+.++..+. ..+++.|+|.-.... + ...|+|....+..+...... ....+.|+
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~~~------------~~~~~~i~ 70 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDPI------------LTTSVPVY 70 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCCB------------SSSEEEEE
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeeeec------------ccceEEEC
Confidence 577777765432 235799999965321 1 24566766554433222110 11257799
Q ss_pred CCCCCCEEEEEeCc--------CCceeeEEEECC
Q 045849 84 HLEFNTKYYYVVGI--------GHTERQFWFVTP 109 (320)
Q Consensus 84 ~L~p~t~Y~Y~v~~--------~~~s~~~~F~t~ 109 (320)
+|+||+.|.+||.. +.||+...++|+
T Consensus 71 ~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 71 SLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp EEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 99999999999954 246666666653
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.96 E-value=0.0025 Score=42.86 Aligned_cols=70 Identities=17% Similarity=0.203 Sum_probs=43.4
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.|..+++. +...+++.|.|.-.... ..-.|+|....+...... ... ..-...+.|+||+|+|.|.+
T Consensus 3 pP~~l~~~--~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~ 70 (91)
T d1fnfa2 3 PPTDLRFT--NIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAE----LSI------SPSDNAVVLTNLLPGTEYVV 70 (91)
T ss_dssp CCEEEEEE--SCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEE----EEE------CTTCCEEEECSCCTTCEEEE
T ss_pred cCCceEEE--EeCCCEEEEEEEecCCCCcceeEEEEEECCCCccEEE----EEe------CCCceEEEEeceeCCCEEEE
Confidence 36666665 44568999999865322 234678876554322111 011 01122478999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 71 ~V~a 74 (91)
T d1fnfa2 71 SVSS 74 (91)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.0025 Score=42.91 Aligned_cols=69 Identities=22% Similarity=0.245 Sum_probs=44.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
.|..+++.-- ..++++|.|.-.... ..-.|+|....+...... .. ..-.....|++|+|||.|.++
T Consensus 4 pP~~l~v~~~--~~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~~ 70 (90)
T d1fnha2 4 PPRRARVTDA--TETTITISWRTKTETITGFQVDAVPANGQTPIQR-----TI------KPDVRSYTITGLQPGTDYKIY 70 (90)
T ss_dssp CCEEEEEEEE--CSSEEEEEEECCSSCCCCEEEEEEESSSSCCEEE-----EC------CTTCSEEEEESCCTTCEEEEE
T ss_pred cCCCCEEEEe--cCCEEEEEEECCCCCCceeEEEEEEccCCceEEE-----ec------CCCccEEEeCCCCCCcEEEEE
Confidence 5778777643 468999999865433 345677776543221111 10 111234679999999999999
Q ss_pred eCc
Q 045849 95 VGI 97 (320)
Q Consensus 95 v~~ 97 (320)
|..
T Consensus 71 V~a 73 (90)
T d1fnha2 71 LYT 73 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.92 E-value=0.00058 Score=49.17 Aligned_cols=88 Identities=25% Similarity=0.390 Sum_probs=51.4
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC--C----CCeEEEeccCCCC---ceEEEEEEEEEEeccccceEEEEEEecCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP--G----TNTVVYWSENSEQ---KEQAEGKVYTYKYYNYTSGYIHHCTIRHLE 86 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~--~----~~~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 86 (320)
+|..|.+..-. .++++|.|.-.... . ...+.|....... ............ .-...+.|.+|+
T Consensus 17 ~P~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~L~ 88 (125)
T d1uena_ 17 APGNVRVNVVN--STLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ------GSKTHGMLPGLE 88 (125)
T ss_dssp CCSSCEEEEEE--TTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE------SSCSEEEEESCC
T ss_pred CCcccEEEEec--CCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeC------CCccEEEECCCC
Confidence 58888887544 47999999764211 1 1234444332211 111111111111 112358899999
Q ss_pred CCCEEEEEeCc------CCceeeEEEECCCC
Q 045849 87 FNTKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 87 p~t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
|+|.|.+||.. +.+|....|+|.+.
T Consensus 89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 99999999964 24677889999754
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.89 E-value=0.0016 Score=46.38 Aligned_cols=84 Identities=19% Similarity=0.264 Sum_probs=49.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC--CCCCe----EEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE--PGTNT----VVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNT 89 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 89 (320)
.|..|.+.... .+++.|.|..... ..... |+|..... . ....... .........|+||+|+|
T Consensus 14 ~P~~v~~~~~~--~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~----~--~~~~~~~----~~~~~~~~~i~~L~p~t 81 (119)
T d1x5ha1 14 APQNLSLEVRN--SKSIMIHWQPPAPATQNGQITGYKIRYRKASR----K--SDVTETL----VSGTQLSQLIEGLDRGT 81 (119)
T ss_dssp CCEEEEEECCS--SSEEEEEEECCCTTTCCSCEEEEBCEEEETTE----E--EEEECCB----CCTTCCEEEEECCCSSC
T ss_pred CCcCeEEEEec--CcEEEEEEEcccccCCCCCEEEEEEEEeeccc----c--cceeeee----cCCCccEEEeCCCCCCC
Confidence 57777776544 5899999986421 11122 33433221 0 0100000 11123457799999999
Q ss_pred EEEEEeCc------CCceeeEEEECCCC
Q 045849 90 KYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 90 ~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.|.++|.. |.+|....|+|.+.
T Consensus 82 ~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 82 EYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 99999964 24677888999653
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.0027 Score=42.59 Aligned_cols=70 Identities=16% Similarity=0.142 Sum_probs=42.9
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
+|..+.++-- ..++++|+|.-.... ....++|........... . ... .-....+|+||+|||.|.+|
T Consensus 2 pP~~l~~~~v--~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~---~-~~~------~~~~~~~i~~L~p~t~Y~~~ 69 (90)
T d1fnha1 2 APTDLKFTQV--TPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKE---I-NLA------PDSSSVVVSGLMVATKYEVS 69 (90)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCSSCCSEEEEEEEESSSCSCCCE---E-EEC------TTCCEEEECSCCTTCEEEEE
T ss_pred CCCCEEEEEe--cCCEEEEEEEccceeccceEEEEEeeeCCCceEE---E-EeC------CCCeEEEEecccCceEEEEE
Confidence 4666666543 468999999886533 345667765543221110 0 000 01124789999999999999
Q ss_pred eCc
Q 045849 95 VGI 97 (320)
Q Consensus 95 v~~ 97 (320)
|..
T Consensus 70 V~a 72 (90)
T d1fnha1 70 VYA 72 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.0017 Score=47.63 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=26.9
Q ss_pred EEEecCCCCCCEEEEEeCc------CCceeeEEEECCCC
Q 045849 79 HCTIRHLEFNTKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
.++|++|+|+|.|.+||.. +.+|+...|+|++.
T Consensus 83 ~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 4789999999999999964 34677888999654
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.82 E-value=0.0012 Score=47.13 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=44.6
Q ss_pred CccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCC-ceEEEEEEEEEEeccccceEEEE
Q 045849 5 ADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQ-KEQAEGKVYTYKYYNYTSGYIHH 79 (320)
Q Consensus 5 ~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 79 (320)
.+|..+|. .|..+.+.-- ..++++|+|.-..... ...|+|....... +..+. ... . ...
T Consensus 10 ~~~~~~P~---pP~~~~v~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~~~-----~--~~~ 73 (117)
T d1uema_ 10 YDLSDLPG---PPSKPQVTDV--TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA----NHV-----K--TTL 73 (117)
T ss_dssp CCSCCSCB---CCCCCEEEEE--CSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE----EEE-----C--SSE
T ss_pred ceeCccCc---CCCCCEEEEc--cCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEec----ccc-----c--ccc
Confidence 45566665 6777777643 3578999997443221 2455555443211 11110 000 0 124
Q ss_pred EEecCCCCCCEEEEEeCc
Q 045849 80 CTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 80 ~~l~~L~p~t~Y~Y~v~~ 97 (320)
.+|++|+|++.|.+||..
T Consensus 74 ~~v~~L~p~t~Y~frV~A 91 (117)
T d1uema_ 74 YTVRGLRPNTIYLFMVRA 91 (117)
T ss_dssp EEECSCCTTCEEEEEEEE
T ss_pred ceECCCCCCCEEEEEEEE
Confidence 578999999999999975
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.0012 Score=47.44 Aligned_cols=79 Identities=18% Similarity=0.147 Sum_probs=46.8
Q ss_pred CCCcEEEEEEeCCCCC---CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc------C
Q 045849 28 VGKAVIVSWVTVDEPG---TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI------G 98 (320)
Q Consensus 28 ~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~------~ 98 (320)
.++++.|+|.-..... ...|.|......... ..-...... ..-....+|.||+|+|.|.+||.. +
T Consensus 28 s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~-~~~~~~~v~-----~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G 101 (120)
T d1ujta_ 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQAT-SSWQNLDAK-----VPTERSAVLVNLKKGVTYEIKVRPYFNEFQG 101 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTT-TCCEEEECC-----CTTCCEEEEESCCSSEEEEEEEEEESSSCCC
T ss_pred CCCeEEEEecCCCCCCcEEEEEEEeeecccCCCC-cceEEEEec-----cCceeEEEECCCCCCCEEEEEEEEEeCCcCc
Confidence 4689999999754222 246777654332110 000000100 111234678999999999999954 3
Q ss_pred CceeeEEEECCCCC
Q 045849 99 HTERQFWFVTPPEV 112 (320)
Q Consensus 99 ~~s~~~~F~t~p~~ 112 (320)
..|+...++|.+..
T Consensus 102 ~~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 102 MDSESKTVRTTEES 115 (120)
T ss_dssp CCCCCEEEEECSSC
T ss_pred CCCCCEEEEeCCCC
Confidence 46778889997753
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.00055 Score=48.01 Aligned_cols=69 Identities=12% Similarity=0.060 Sum_probs=39.8
Q ss_pred CCcEEEEEEeCCCC-----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc------
Q 045849 29 GKAVIVSWVTVDEP-----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI------ 97 (320)
Q Consensus 29 ~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~------ 97 (320)
+++++|+|...... ....|+|.............. .-.....|+||+||+.|.+||..
T Consensus 25 ~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~ 93 (107)
T d2crma1 25 SHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS-----------GATREHLCDRLNPGCFYRLRVYCISDGGQ 93 (107)
T ss_dssp TTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC-----------SSCSEEEECSCCTTSCEEEEEEEEETTEE
T ss_pred CCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEeec-----------CCccEEEEeccCCCCEEEEEEEEECCCcC
Confidence 47999999864321 124455544433222111100 01123579999999999999965
Q ss_pred CCceeeEEEEC
Q 045849 98 GHTERQFWFVT 108 (320)
Q Consensus 98 ~~~s~~~~F~t 108 (320)
+.+|+...|+|
T Consensus 94 s~~S~~v~v~T 104 (107)
T d2crma1 94 SAVSESLLVQT 104 (107)
T ss_dssp CCCCCCCCCCC
T ss_pred cCCCCcEEEEC
Confidence 24566666666
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.001 Score=45.42 Aligned_cols=70 Identities=9% Similarity=0.059 Sum_probs=42.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC--CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP--GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.|..+.+.- ...++++|+|.-.... ..-.|+|....+...... ... ..-.....|+||+||+.|.+
T Consensus 8 ~P~~l~v~~--~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~~------~~~~t~~~i~~L~p~t~Y~~ 75 (95)
T d2fnba_ 8 QLTDLSFVD--ITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFE----DFV------DSSVGYYTVTGLEPGIDYDI 75 (95)
T ss_dssp CCTTCEEEC--CCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEE----EEC------CSSCSEEEECCCCTTSEEEE
T ss_pred cCCCeEEEE--EcCCEEEEEEEecCCceEEeEEEEEEEeeccceEEE----EEe------CCCCeEEEEecccCCEEEEE
Confidence 366666653 4468999999765322 234566765543221111 010 11123467999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 76 ~V~a 79 (95)
T d2fnba_ 76 SVIT 79 (95)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.73 E-value=0.0022 Score=44.94 Aligned_cols=75 Identities=11% Similarity=-0.012 Sum_probs=42.0
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
+|..+.+.- ...++++|+|.-....+ ...|+|.............. .... .........|.||+|++.|
T Consensus 13 ~P~~~~~~~--~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~v~~L~p~t~Y 85 (111)
T d1wisa1 13 PPTNLGISN--IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI-HQLS----NEPDARSMEVPDLNPFTCY 85 (111)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE-EEEE----SCTTCSEEEECSCCTTSEE
T ss_pred CCCCCEEEE--cCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeee-eeee----cccceeEEEeCCCCCCCEE
Confidence 677766653 34689999998554222 23556665443222110011 1100 0111224678999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.+||..
T Consensus 86 ~frV~A 91 (111)
T d1wisa1 86 SFRMRQ 91 (111)
T ss_dssp CCCCEE
T ss_pred EEEEEE
Confidence 999965
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.73 E-value=0.0028 Score=44.95 Aligned_cols=84 Identities=11% Similarity=0.143 Sum_probs=48.5
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
..|..+.+..-. .+++.|.|.-.... ....|+|............ .... .. .....|++|+|+|.
T Consensus 22 ~~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~---~~~~----~~--~~~~~i~~L~p~t~ 90 (117)
T d1wfoa1 22 GPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV---EVLA----PS--ARQYTATGLKPESV 90 (117)
T ss_dssp CCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE---EEEC----TT--CCEEEEESCCSSSE
T ss_pred cCCCCcEEEEec--CCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeE---EecC----Cc--eEEEEECCCCCCCE
Confidence 367777766543 58999999855322 1235667655432211100 0000 01 12456899999999
Q ss_pred EEEEeCcC------CceeeEEEECC
Q 045849 91 YYYVVGIG------HTERQFWFVTP 109 (320)
Q Consensus 91 Y~Y~v~~~------~~s~~~~F~t~ 109 (320)
|.+||..- .+|+...++|.
T Consensus 91 Y~~~V~A~n~~G~g~~S~~~~~tT~ 115 (117)
T d1wfoa1 91 YLFRITAQTRKGWGEAAEALVVTTE 115 (117)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECCS
T ss_pred EEEEEEEECCCcCCCCcCCEEEECC
Confidence 99999642 35566666663
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.005 Score=41.57 Aligned_cols=71 Identities=14% Similarity=0.198 Sum_probs=44.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
.+|.++.+.-- ..++++|.|.-.... ....++|....+... .. . . .........+|+||+|||.|.+
T Consensus 3 d~P~~l~v~~v--t~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~-----~~-~-~---~~~~~~~~~~i~~L~p~t~Y~~ 70 (94)
T d1j8ka_ 3 DRPKGLAFTDV--DVDSIKIAWESPQGQVSRYRVTYSSPEDGIH-----EL-F-P---APDGEEDTAELQGLRPGSEYTV 70 (94)
T ss_dssp CCCCCCEEEEE--ETTEEEEECCCCSSCCSCEEEEEEETTTEEE-----EE-C-C---CCCSSCCEEEECSCCCCSEEEE
T ss_pred CCCCCCEEEEe--cCCEEEEEEeCCCccccceEEEEEeecCCCc-----eE-E-E---ecCCCccEEEECCCCCCCEEEE
Confidence 46888877633 358999999865432 345667776543110 10 0 0 0111233577999999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
+|..
T Consensus 71 ~V~a 74 (94)
T d1j8ka_ 71 SVVA 74 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.0026 Score=44.02 Aligned_cols=72 Identities=15% Similarity=0.181 Sum_probs=45.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCC--CC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDE--PG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
..|..+.++.-....+++.|+|..... .. ...|+|.......+....- ........|.+|+|+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~ 71 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWSG 71 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCTT
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeecc-----------ccceEEEEECCCCCC
Confidence 478888887655556789999997531 11 2456666655433322210 011235679999999
Q ss_pred CEEEEEeCc
Q 045849 89 TKYYYVVGI 97 (320)
Q Consensus 89 t~Y~Y~v~~ 97 (320)
+.|.+||..
T Consensus 72 t~Y~~rVra 80 (104)
T d1n26a3 72 LRHVVQLRA 80 (104)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.63 E-value=0.023 Score=45.45 Aligned_cols=167 Identities=13% Similarity=0.180 Sum_probs=89.0
Q ss_pred eEEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+||+++||.=..... ...|.++.+ +.||||..|.++-. |.. -..+.+.++++ ..+- ..+.|||=+
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk~---~~DfVIaNgENaa~-G~G----it~k~~~~L~~---~GVD-vIT~GNH~w 68 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIRD---RYDLVIANGENAAR-GKG----LDRRSYRLLRE---AGVD-LVSLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGG---GCSEEEEECTTTTT-TSS----CCHHHHHHHHH---HTCC-EEECCTTTT
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHHh---hCCEEEEeeeccCC-CcC----CCHHHHHHHHH---hCCC-EEEcCcccc
Confidence 589999998433211 122334433 67999999999854 221 11222322222 3454 348999988
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCC-CCCCCcEEEEEeCcEEEEEEcccCC--CCCChHHHHHHHHhcccCCCCCCCEE
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRAS-GSTAPFWYSIKRASVYIIVLSSYSA--YGKYTPQYKWLEEELPKVNRSETPWL 271 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~-~~~~~~~ys~~~g~v~fi~lds~~~--~~~~~~q~~WL~~~L~~~~~~~~~~~ 271 (320)
... +...|... +..--|.|-+ ...+..|+.++.++.++.+++-... ....+.-+.-+++.|++ .+.+.+
T Consensus 69 dkk----ei~~~i~~-~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~---~~~~~i 140 (252)
T d2z06a1 69 DHK----EVYALLES-EPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEE---EKADYV 140 (252)
T ss_dssp SCT----THHHHHHH-SSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHH---CCCSEE
T ss_pred cch----hhhhhhcc-ccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhh---cCccEE
Confidence 532 11111111 1233344432 2234557888888877777765321 11222233334444444 345678
Q ss_pred EEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 272 IVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 272 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
||=+|-=..+ ...++ ..+-.-+|.+|+-=|+|.
T Consensus 141 ~VDfHaEaTS-----------EK~A~-g~~ldGrvsavvGTHTHV 173 (252)
T d2z06a1 141 LVEVHAEATS-----------EKMAL-AHYLDGRASAVLGTHTHV 173 (252)
T ss_dssp EEEEECSCHH-----------HHHHH-HHHHBTTBSEEEEESSCS
T ss_pred EEEcccchhh-----------hheee-eEecCCCEEEEEecCccc
Confidence 8888842211 11222 233367899999999996
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0013 Score=45.47 Aligned_cols=74 Identities=20% Similarity=0.243 Sum_probs=43.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCce-EEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKE-QAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|..+.+..-. .+++.|+|.-..... .-.|+|......... ........ .+. . ...++|.||+|++.
T Consensus 5 ~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~---~~~-~--~~~~~i~~L~p~t~ 76 (103)
T d1qg3a2 5 EPGRLAFNVVS--STVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLV---DNP-K--NRMLLIENLRESQP 76 (103)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEE---CCT-T--CCEEEECCCCTTCC
T ss_pred cCCCcEEEEec--CCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEe---cCC-C--ceEEEEeecCCCCE
Confidence 68888887654 479999999654322 235566554432110 00001111 111 1 23578999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.+||..
T Consensus 77 Y~~~V~A 83 (103)
T d1qg3a2 77 YRYTVKA 83 (103)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.61 E-value=0.0017 Score=43.88 Aligned_cols=61 Identities=18% Similarity=0.223 Sum_probs=38.2
Q ss_pred CCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc
Q 045849 27 LVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 27 ~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
-.+++++|.|...... ....|+|....+...... .... .-...+.|+||+||+.|.++|..
T Consensus 8 ~t~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~----~~~~------~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 8 ATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQE----FTVP------GSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp ECSSCEEEECCCCSSCCSEEEEEEEETTCCSCCEE----EEEE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred eCCCEEEEEEEccceEecEEEEEEEcCCCCceeEE----EEeC------CCccEEEeCCCCCCCEEEEEEEE
Confidence 3468999999865433 345777876654322111 0111 11225789999999999999964
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.59 E-value=0.0049 Score=41.66 Aligned_cols=59 Identities=14% Similarity=0.264 Sum_probs=36.9
Q ss_pred CCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc
Q 045849 28 VGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 28 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
..++++|+|.-..... ...|+|............ .. .-.....|++|.|++.|.+||..
T Consensus 12 ~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V~A 74 (94)
T d2dn7a1 12 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----FG------KDDQHFTVTGLHKGTTYIFRLAA 74 (94)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----EE------TTCCEEEEECCCTTCEEEEEEEE
T ss_pred eCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEE-----cC------CCccEEEEEccCCeeEEEEEEEE
Confidence 4589999999764322 345677665543332211 11 11223568999999999999975
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.52 E-value=0.0014 Score=45.99 Aligned_cols=71 Identities=20% Similarity=0.205 Sum_probs=41.6
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCC-ceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQ-KEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|..+.+.-- ..++++|+|.-.... ..-.|+|....... +....... ........|++|+|++.
T Consensus 13 ~P~~~~v~~~--~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~v~~L~p~t~ 81 (108)
T d1x4za1 13 APDRPTISTA--SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAI---------PPSRLSVEITGLEKGIS 81 (108)
T ss_dssp CCCCCEEEEC--CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEE---------CTTCCEEEEESCCTTCE
T ss_pred cCCCCEEEEc--cCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEee---------cCCccEEEECCCCCCCE
Confidence 6777766533 358999999543222 23456666544322 21211110 11123467899999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.|||..
T Consensus 82 Y~frV~A 88 (108)
T d1x4za1 82 YKFRVRA 88 (108)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.51 E-value=0.0012 Score=47.19 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=26.7
Q ss_pred EEEecCCCCCCEEEEEeCcC------CceeeEEEECCCCC
Q 045849 79 HCTIRHLEFNTKYYYVVGIG------HTERQFWFVTPPEV 112 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~v~~~------~~s~~~~F~t~p~~ 112 (320)
..+|++|+|++.|.+||..- .+|+...++|.+..
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCC
Confidence 35789999999999999752 35678889886543
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0019 Score=44.75 Aligned_cols=70 Identities=13% Similarity=0.055 Sum_probs=40.9
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.|..+.+.--. .++++|+|.-.... ....++|.......+..... ........+++||+|+|.
T Consensus 5 pP~~p~~~~~t--~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~ 72 (104)
T d1bpva_ 5 PPGKPVPLNIT--RHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTEDAA 72 (104)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCSSCC
T ss_pred CCCCCEEEEec--CCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe----------eccceeEEEEcCCCCCCE
Confidence 45555554322 47999999864321 23566666654432211110 011123467899999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.|||..
T Consensus 73 Y~frV~A 79 (104)
T d1bpva_ 73 YEFRVIA 79 (104)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.44 E-value=0.0016 Score=44.82 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=42.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCCCceEE--EEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSEQKEQA--EGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
.|..+++.- -..++++|.|...... ....|+|........... ......... ..-.....|.+|+|++.|.
T Consensus 6 ~~~~l~v~~--~t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~L~p~t~Y~ 79 (101)
T d2cuia1 6 RLSQLSVTD--VTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMV----PGTRHSAVLRDLRSGTLYS 79 (101)
T ss_dssp CCCCCEEES--CCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEE----ETTCCEEEECSCCTTCEEE
T ss_pred CCCCcEEEE--ECCCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEeec----ccceeEEEeCCCCcCCEEE
Confidence 455555554 4468999999755322 345777776543211000 000001000 1112345789999999999
Q ss_pred EEeCc
Q 045849 93 YVVGI 97 (320)
Q Consensus 93 Y~v~~ 97 (320)
++|..
T Consensus 80 ~~V~a 84 (101)
T d2cuia1 80 LTLYG 84 (101)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.33 E-value=0.01 Score=41.12 Aligned_cols=70 Identities=14% Similarity=0.239 Sum_probs=36.9
Q ss_pred CCCcEEEEEEeCCCCCCC----eEEEeccCCC-CceEEEEEEEEEE-eccccceEEEEEEecCCCCCCEEEEEeCc
Q 045849 28 VGKAVIVSWVTVDEPGTN----TVVYWSENSE-QKEQAEGKVYTYK-YYNYTSGYIHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 28 ~~~~~~v~W~t~~~~~~~----~v~y~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
..++++|+|.-....+.. .|+|...... .+........... ............+|+||+|++.|.+||..
T Consensus 12 ~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A 87 (107)
T d2ic2a1 12 SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 87 (107)
T ss_dssp C---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred ECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEEE
Confidence 468999999987543333 4555544322 2222221111000 00112334557889999999999999975
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=96.32 E-value=0.029 Score=45.61 Aligned_cols=176 Identities=15% Similarity=0.095 Sum_probs=91.2
Q ss_pred CCeEEEEEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCC
Q 045849 116 VPYSFGLIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNH 192 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 192 (320)
..+||+++||.=.... ....|.++.+. .++||||..|.++..+. .-..+.+.++++ ..+- +.+.|||
T Consensus 3 ~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~-~~iDfVIaNgENaa~G~-----Git~k~~~eL~~---~GvD-vIT~GNH 72 (281)
T d1t71a_ 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSK-YQADLVIVNAENTTHGK-----GLSLKHYEFLKE---AGVN-YITMGNH 72 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHH-HTCSEEEEECTBTTTTS-----SCCHHHHHHHHH---HTCC-EEECCTT
T ss_pred ccceEEEEEccCCHHHHHHHHHHhHHHHHH-hCCCEEEECCccCCCCc-----CCCHHHHHHHHH---hCCc-EEEcCch
Confidence 4789999999843221 12234555555 38999999999985422 112223322222 3454 3489999
Q ss_pred ccccCCCCCCcccCcccceeeeCCCCCC-CCCCCcEEEEEeCcEEEEEEcccCC-CC---CChHHHHHHHHhcccCCCCC
Q 045849 193 EIDFYPEIGETVPFKPYSHRYHVPYRAS-GSTAPFWYSIKRASVYIIVLSSYSA-YG---KYTPQYKWLEEELPKVNRSE 267 (320)
Q Consensus 193 D~~~~~~~~~~~~~~~~~~~f~~p~~~~-~~~~~~~ys~~~g~v~fi~lds~~~-~~---~~~~q~~WL~~~L~~~~~~~ 267 (320)
=+....-..-.........-.++|..-+ ...+..|..+..++..+.+++-... +. .......-+++.+.. .+
T Consensus 73 ~wd~kei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~---~~ 149 (281)
T d1t71a_ 73 TWFQKLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK---RD 149 (281)
T ss_dssp TTCCGGGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT---CC
T ss_pred hhhchhhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc---cC
Confidence 8752100000000011111122332111 2234457888887766666665321 11 112233334444443 45
Q ss_pred CCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 268 TPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 268 ~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
.+.+||=+|-=..+ ...++ -.+-.-+|.+|+-=|+|.
T Consensus 150 ~d~i~VDfHaEATS-----------EK~A~-g~~lDGrvsaVvGTHTHV 186 (281)
T d1t71a_ 150 CDLHIVDFHAETTS-----------EKNAF-CMAFDGYVTTIFGTHTHV 186 (281)
T ss_dssp CSEEEEEEECSCHH-----------HHHHH-HHHHTTTSSEEEEESSSS
T ss_pred CCeEEEEeccchhh-----------hhhhh-eeeeCCcEEEEEecCccc
Confidence 67788888842211 11122 233367899999999996
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.30 E-value=0.064 Score=42.91 Aligned_cols=169 Identities=15% Similarity=0.147 Sum_probs=91.6
Q ss_pred eEEEEEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+||+++||.=.... ..+.|.++.+ +.||||..|.++-. +. .-..+.+.++++ ..+- ..+.|||=+
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk~---~~DfVIaNgENaa~-G~----Git~~~~~~l~~---~GvD-viT~GNH~w 68 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIRP---QFDFVIVNMENSAG-GF----GMHRDAARGALE---AGAG-CLTLGNHAW 68 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGG---GCSEEEEECTBTTT-TS----SCCHHHHHHHHH---HTCS-EEECCTTTT
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHHh---hCCEEEECCccCCC-Cc----CCCHHHHHHHHH---cCCc-EEEcCchhh
Confidence 58999999843321 1223344433 57999999999854 22 112233333332 3454 348999988
Q ss_pred ccCCCCCCcccCc-ccceeeeCCCCCC--CCCCCcEEEEEeCcEEEEEEcccCC--CCCChHHHHHHHHhcccCCCCCCC
Q 045849 195 DFYPEIGETVPFK-PYSHRYHVPYRAS--GSTAPFWYSIKRASVYIIVLSSYSA--YGKYTPQYKWLEEELPKVNRSETP 269 (320)
Q Consensus 195 ~~~~~~~~~~~~~-~~~~~f~~p~~~~--~~~~~~~ys~~~g~v~fi~lds~~~--~~~~~~q~~WL~~~L~~~~~~~~~ 269 (320)
... +...|- ....+..-|.|-+ ...+..|+.+..++.++.+++-... ....+.-+.-+++.|++ .+.+
T Consensus 69 dkk----ei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~---~~~~ 141 (255)
T d1t70a_ 69 HHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLER---DDLG 141 (255)
T ss_dssp SST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTC---SSCC
T ss_pred cch----hHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhh---cCCC
Confidence 522 111110 0111223343321 2235567788887777777664221 12233344556777765 4556
Q ss_pred EEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 270 WLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 270 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
.+||=+|-=..+ ...++ -.+-.-+|.+|+-=|+|.-
T Consensus 142 ~i~VDfHaEaTS-----------EK~A~-g~~ldGrvsav~GTHTHV~ 177 (255)
T d1t70a_ 142 TVFVDFHAEATS-----------EKEAM-GWHLAGRVAAVIGTHTHVP 177 (255)
T ss_dssp EEEEEEECSCHH-----------HHHHH-HHHHTTSSSEEEEESSCSC
T ss_pred eEEEEccchhHH-----------HHHHH-HhhhcCcEEEEEecCcccc
Confidence 788888842211 11222 2333678999999999973
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.85 E-value=0.0099 Score=41.05 Aligned_cols=70 Identities=13% Similarity=0.156 Sum_probs=41.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
+|..+.+.- -..+++.|.|....... ...|+|........... ... ..-.....|+||+|++.|
T Consensus 13 ~p~~l~~~~--~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y 80 (106)
T d1wfna1 13 PVGHLSFSE--ILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVT----HYL------PNVTLEYRVTGLTALTTY 80 (106)
T ss_dssp CCSCCEEES--CCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCC----EEE------CSSCCEEEEESCCTTCEE
T ss_pred CCCCcEEEE--ecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEE----Eec------CCCeeEEEEccCCCCCEE
Confidence 566776653 34589999998654321 24466655443211100 000 111235678999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.++|..
T Consensus 81 ~~~V~A 86 (106)
T d1wfna1 81 TIEVAA 86 (106)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.83 E-value=0.008 Score=42.16 Aligned_cols=82 Identities=16% Similarity=0.181 Sum_probs=49.0
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.+|..+++..+. +++.|.|.-....+ .-.|+|+..... .... .. ..-....+|.+|+|++.
T Consensus 22 ~~P~~~~~~~~~---~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~-~~~~-----~~------~~~~~~~~i~~L~p~t~ 86 (113)
T d1x5ia1 22 EVPSSLHVRPLV---TSIVVSWTPPENQNIVVRGYAIGYGIGSPH-AQTI-----KV------DYKQRYYTIENLDPSSH 86 (113)
T ss_dssp CSCSEEEEEEET---TEEEEEEECCSCTTBCCCEEEEEECSSCGG-GEEE-----EC------CTTCCEEEECSCCSSCE
T ss_pred CCCEeeeeeeCC---CEEEEEEEccccCCccEEEEEEEeeecccc-ceee-----ee------eCCccEEEEeccccCcE
Confidence 378888887653 68999999654322 246666654332 1111 11 11123467999999999
Q ss_pred EEEEeCcC---Ccee--eEEEECCCC
Q 045849 91 YYYVVGIG---HTER--QFWFVTPPE 111 (320)
Q Consensus 91 Y~Y~v~~~---~~s~--~~~F~t~p~ 111 (320)
|.+||..- +.++ ...++|.|.
T Consensus 87 Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 87 YVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp ECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 99999652 2322 345677653
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.81 E-value=0.015 Score=40.03 Aligned_cols=72 Identities=13% Similarity=0.071 Sum_probs=43.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCC-----C-CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVD-----E-PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~-----~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
..|..|.+.... .++++|+|.-.. . .....|.|........... .... ........|.+|+|+
T Consensus 6 ~~P~~v~~~~~~--~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~----~~~~-----~~~~~~~~i~~L~p~ 74 (105)
T d1cfba2 6 KNPDNVVGQGTE--PNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN----NNIF-----DWRQNNIVIADQPTF 74 (105)
T ss_dssp CCCSCCEEECSS--TTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE----EEEC-----CTTCCEEEECSCCSS
T ss_pred CCCcCeEEEEcc--CCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeE----EEec-----CCCccEEEECCCCCC
Confidence 368888876544 589999997421 1 1234567765543221111 0100 112235679999999
Q ss_pred CEEEEEeCc
Q 045849 89 TKYYYVVGI 97 (320)
Q Consensus 89 t~Y~Y~v~~ 97 (320)
+.|.++|..
T Consensus 75 t~Y~~~V~A 83 (105)
T d1cfba2 75 VKYLIKVVA 83 (105)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999965
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.79 E-value=0.0049 Score=42.20 Aligned_cols=69 Identities=22% Similarity=0.368 Sum_probs=37.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCC-----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPG-----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
+|-.|+++.+ .+++.|.|....... .-.|+|....+.-....... . .-...+.|.+|+|++.
T Consensus 7 ~Pp~l~v~~~---~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~--~--------~~~~~~~l~~L~p~t~ 73 (100)
T d2gysa4 7 APPSLQVTKD---GDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET--L--------QNAHSMALPALEPSTR 73 (100)
T ss_dssp CCCEEEEC------CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE--E--------ESCSEEECCCCCSSCC
T ss_pred CCCccEEEEC---CCEEEEEEecCcccCCccceEEEEEEeecccceeceeecc--c--------CCceEEEeCCCCCCCe
Confidence 3445655543 368999998775322 35677776544311110000 0 0122577999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|.+||..
T Consensus 74 Y~~rVRa 80 (100)
T d2gysa4 74 YWARVRV 80 (100)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.55 E-value=0.011 Score=49.60 Aligned_cols=68 Identities=18% Similarity=0.194 Sum_probs=39.2
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHh---CCCCCceEEEcccccccCCCCCCCChhhhhHHHHH-hhhhccCCeEeCCCCCcc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYER---NPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFV-ERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~---~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~~~~~GNHD~ 194 (320)
.+.++||+|..... |.++.+ .+.+-.-.|++||+|+.+. ...+...-.+ -.+.-..-++..+||||.
T Consensus 61 pv~VvGDiHGq~~D---L~~if~~~g~p~~~~~ylFLGDYVDRG~------~slEvi~lL~~lKi~yP~~v~LLRGNHE~ 131 (324)
T d1s95a_ 61 KITVCGDTHGQFYD---LLNIFELNGLPSETNPYIFNGDFVDRGS------FSVEVILTLFGFKLLYPDHFHLLRGNHET 131 (324)
T ss_dssp EEEEECCCTTCHHH---HHHHHHHHCCCBTTBCEEEESCCSSSST------THHHHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CEEEEEECCCCHHH---HHHHHHHCCCCCCCCeEEEecccccCcC------cceeehHHHHHHHHhCCCcEEeccCCccc
Confidence 57889999976432 223322 2212234789999997642 2233322111 122334569999999998
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 132 ~ 132 (324)
T d1s95a_ 132 D 132 (324)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.43 E-value=0.03 Score=38.52 Aligned_cols=80 Identities=9% Similarity=0.042 Sum_probs=44.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC---CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG---TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.+|..|..... ...++|+++|.-..... ...+.|............-..... .........+.+++|+|++.|
T Consensus 6 ~~P~~v~~i~~-~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~t~Y 81 (107)
T d1cd9b1 6 ASPSNLSCLMH-LTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV---AKKRQNNCSIPRKNLLLYQYM 81 (107)
T ss_dssp CCCEEEEEEEE-TTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEE---CCTTCCEEEEEGGGCCTTSCE
T ss_pred CCCcCCEEEEe-cCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeec---cccCccccEEEcCCCCcCceE
Confidence 37877763332 33589999998654332 335566554322111110000000 011234456889999999999
Q ss_pred EEEeCcC
Q 045849 92 YYVVGIG 98 (320)
Q Consensus 92 ~Y~v~~~ 98 (320)
.+||...
T Consensus 82 ~frV~A~ 88 (107)
T d1cd9b1 82 AIWVQAE 88 (107)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999764
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=95.22 E-value=0.019 Score=47.56 Aligned_cols=69 Identities=22% Similarity=0.342 Sum_probs=39.5
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHh-hhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVE-RSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~~~GNHD~~ 195 (320)
+.++||+|........+-+....+ ...-.|++||+|+.+. ...+...-.+. ++....-++..+||||..
T Consensus 54 v~VvGDiHG~~~DL~~if~~~g~p-~~~~ylFLGDYVDRG~------~slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 54 LKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRGK------QSLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCT-TSSCEEECSCCSSSSS------CHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred eEEEEECCCChHhHHHHHhhcCCC-ccceEEeeccccCCCc------cchHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 688999997643322222222222 2344788999996632 22333322211 223445699999999985
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.96 E-value=0.024 Score=46.81 Aligned_cols=69 Identities=20% Similarity=0.248 Sum_probs=38.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHH-hhhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFV-ERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~~~~~GNHD~~ 195 (320)
+.++||+|........+-+....+ .-.-.|++||+|+.+.. ..+...-.+ -.+.-..-++...||||..
T Consensus 47 v~VvGDlHG~~~DL~~if~~~g~p-~~~~ylFLGDYVDRG~~------slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 47 VTVCGDVHGQFHDLMELFRIGGKS-PDTNYLFMGDYVDRGYY------SVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCT-TTSCEEECSCCCCSSSS------HHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred eEEEeeCCCCHHHHHHHHHhcCCC-ccceEEecCcccCCCCc------ceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 788999997643322221222222 22357889999966431 222221111 1223445699999999975
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.67 E-value=0.052 Score=37.92 Aligned_cols=67 Identities=16% Similarity=0.238 Sum_probs=37.8
Q ss_pred CCcEEEEEEeCC--CCC----CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc-----
Q 045849 29 GKAVIVSWVTVD--EPG----TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI----- 97 (320)
Q Consensus 29 ~~~~~v~W~t~~--~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~----- 97 (320)
.++++|.|.... ... ...|+|............. .. ...+.+|+|+|.|.+||..
T Consensus 31 ~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~~~~-----------~~---~~~~~~L~p~t~Y~~~V~A~n~~G 96 (117)
T d1wj3a_ 31 DTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNT-----------NK---TSAELVLPIKEDYIIEVKATTDGG 96 (117)
T ss_dssp TTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEEE-----------SS---SEEEEECCCSSCEEEEEEEEESSC
T ss_pred CCEEEEEEeecccccCCCceeEEEEEEEecCCCceeeeec-----------ee---eEEEeeccCCcEEEEEEEEEcCCc
Confidence 478999998632 111 2355555544322221110 01 1345689999999999964
Q ss_pred -CCceeeEEEECC
Q 045849 98 -GHTERQFWFVTP 109 (320)
Q Consensus 98 -~~~s~~~~F~t~ 109 (320)
+.+|+...+.+.
T Consensus 97 ~G~~S~~v~v~~~ 109 (117)
T d1wj3a_ 97 DGTSSEQIRIPRI 109 (117)
T ss_dssp CCCBCCCEEECCC
T ss_pred cCCCCCCEEEecc
Confidence 346666666443
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.43 E-value=0.00053 Score=47.80 Aligned_cols=87 Identities=16% Similarity=0.134 Sum_probs=46.9
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEe
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVV 95 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 95 (320)
.|..|....- ..+++.|+|..........+.|...-.............. ......+...|.+|+|++ |.+||
T Consensus 7 ~P~~v~~~~~--~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~~----~~~~~~~~~~~~~L~~~t-Y~~rV 79 (102)
T d2dtge1 7 IVGPVTHEIF--ENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTR----KHFALERGCRLRGLSPGN-YSVRI 79 (102)
T ss_dssp CCCCCCCCSS--SSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCS----SSCCCTTCCCCCSCCSSE-ECCCC
T ss_pred CCCCCEEEEE--CCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeeee----ecccceEEEEEeccceee-EEEEE
Confidence 4555544333 3578999998665443345555542111000000000000 011223457789999985 99999
Q ss_pred Cc------CCceeeEEEECC
Q 045849 96 GI------GHTERQFWFVTP 109 (320)
Q Consensus 96 ~~------~~~s~~~~F~t~ 109 (320)
.. |.+|+...|.|+
T Consensus 80 ~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 80 RATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CEEETTBCCCCCCCCEECCC
T ss_pred EEEcCCccCCCCCCEEEEcc
Confidence 64 357788888884
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.35 E-value=0.037 Score=48.60 Aligned_cols=69 Identities=17% Similarity=0.210 Sum_probs=37.6
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHH-hhhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFV-ERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~~~~~GNHD~~ 195 (320)
+.++||+|........+-.....+.. .-.|++||+|+.+.. ..+-..-.+ -++.-..-++...||||..
T Consensus 72 v~VvGDIHGq~~DLl~If~~~G~P~~-~~yLFLGDYVDRG~~------SlEvlllL~aLKi~yP~~V~LLRGNHE~~ 141 (473)
T d1auia_ 72 VTVCGDIHGQFFDLMKLFEVGGSPAN-TRYLFLGDYVDRGYF------SIECVLYLWALKILYPKTLFLLRGNHECR 141 (473)
T ss_dssp EEEECCCTTCHHHHHHHHHHHCCTTT-CCEEECSCCSSSSSC------HHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred EEEEEeCCCCHHHHHHHHHHcCCCCc-ceEEecCccccCCcc------cHHHHHHHHHHHHhCCCeEEEeCCCCccH
Confidence 68899999764332222222222212 336789999976431 122221111 1223345699999999964
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.11 E-value=0.0034 Score=45.00 Aligned_cols=21 Identities=24% Similarity=0.118 Sum_probs=17.8
Q ss_pred EEEEEecCCCCCCEEEEEeCc
Q 045849 77 IHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 77 ~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
.....|+||+|+|.|.++|..
T Consensus 81 ~~~~~l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 81 HPGWLMRGLKPWTQYAIFVKT 101 (125)
T ss_dssp CCEEEECSCCSSCBCCBEEEE
T ss_pred cCEEEECCCccCCEEEEEEEE
Confidence 345789999999999999964
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.43 E-value=0.037 Score=37.22 Aligned_cols=67 Identities=16% Similarity=0.107 Sum_probs=36.8
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC--------CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG--------TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLE 86 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 86 (320)
..|..|.+....+ ++.+.|.|....... ...|+|....+......... ..++..|.
T Consensus 3 dPP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~~---------------~~t~~~L~ 66 (94)
T d3d85d3 3 DPPKNLQLKPLKN-SRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFT---------------DKTSATVI 66 (94)
T ss_dssp CCCEEEEEEEC-----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEE---------------SSSEEEEC
T ss_pred CCCcccEEEEecC-CCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEeccc---------------cceEEEec
Confidence 4788888887544 467999999875321 23566665443322211110 01123578
Q ss_pred CCCEEEEEeCc
Q 045849 87 FNTKYYYVVGI 97 (320)
Q Consensus 87 p~t~Y~Y~v~~ 97 (320)
|++.|.+||..
T Consensus 67 p~~~Y~v~VRa 77 (94)
T d3d85d3 67 CRKNASISVRA 77 (94)
T ss_dssp CCSSCEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 99999999975
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.00 E-value=0.065 Score=35.83 Aligned_cols=72 Identities=11% Similarity=0.008 Sum_probs=42.2
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC---CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG---TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
..|..+.+..-. .++++++|.-..... ...|.|....+..... ... ...-.....+.+|.|++.|
T Consensus 5 ~~P~n~~~~~~~--~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~------~~~----~~~~~~~~~~~~L~~~~~Y 72 (95)
T d1bqua1 5 EKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHKFADC------KAK----RDTPTSCTVDYSTVYFVNI 72 (95)
T ss_dssp CCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEECCCE------ECC----SSCTTEEECSSCCCTTSCE
T ss_pred CCCeeeEEEEcc--CCEEEEEEeCcccCCCceEEEEEEEEcccceeEe------ecc----cccceeeeeeeecCCCcEE
Confidence 378778777654 578999998764332 3455555443211110 000 0111112457899999999
Q ss_pred EEEeCcC
Q 045849 92 YYVVGIG 98 (320)
Q Consensus 92 ~Y~v~~~ 98 (320)
.+||...
T Consensus 73 ~f~V~A~ 79 (95)
T d1bqua1 73 EVWVEAE 79 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999763
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.91 E-value=0.15 Score=34.01 Aligned_cols=72 Identities=17% Similarity=0.082 Sum_probs=39.4
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCCC--eEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGTN--TVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYY 93 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~--~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 93 (320)
+|..|.+...+ .++++.|.-....+.. .+++-............... .........+.+|.+++.|.+
T Consensus 3 ~P~nv~v~s~n---~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~Y~f 72 (98)
T d1fyhb1 3 TPTNVTIESYN---MNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACIN-------ISHHYCNISDHVGDPSNSLWV 72 (98)
T ss_dssp CCEEEEEECBS---SCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEEE-------ESSSEEECGGGCCSTTSCEEE
T ss_pred cCCceEEEEeC---CcEEEEECCCCCCCCCceeEEEEEeccccceeEEeeee-------cccceeeeEecccCCCCEEEE
Confidence 57777775443 3467999976433332 23333322222211111110 112233466889999999999
Q ss_pred EeCc
Q 045849 94 VVGI 97 (320)
Q Consensus 94 ~v~~ 97 (320)
||..
T Consensus 73 RV~A 76 (98)
T d1fyhb1 73 RVKA 76 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.27 E-value=0.045 Score=38.36 Aligned_cols=73 Identities=19% Similarity=0.153 Sum_probs=43.0
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCC------CCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCC
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDE------PGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFN 88 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 88 (320)
..|..|.+..+. ..+++.|+|.-... .....+.|....+... . ..... ...-...+.|+||+|+
T Consensus 12 ~pP~~v~v~~~~-s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~-~--~~~~~------~~~~~~~~~i~~L~~~ 81 (117)
T d2cspa1 12 APPQDVTVQAGV-TPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQR-V--AEVIF------PTADSTAVELVRLRSL 81 (117)
T ss_dssp CCCEEEEECCCS-STTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSE-E--EEECC------TTCSEEEEESHHHHHH
T ss_pred CCCCccEEEEec-CCCEEEEEEcCCCccccCcccccceEEEEEEeeccc-c--eeeee------eccceeeeeccCCCCC
Confidence 367777765543 24689999985321 1234667765433211 1 11100 1122345789999999
Q ss_pred CEEEEEeCc
Q 045849 89 TKYYYVVGI 97 (320)
Q Consensus 89 t~Y~Y~v~~ 97 (320)
|.|.+||..
T Consensus 82 t~Y~v~V~A 90 (117)
T d2cspa1 82 EAKGVTVRT 90 (117)
T ss_dssp TCSCBEEEE
T ss_pred cEEEEEEEE
Confidence 999999964
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.09 E-value=0.15 Score=34.37 Aligned_cols=73 Identities=15% Similarity=0.095 Sum_probs=46.1
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCCCCC---CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVDEPG---TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.+|..|.+...+ ..++|.|.-....+ .-.|+|.......+..+..-.. .........+.+|.++..|
T Consensus 5 P~P~nv~~~s~n---~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~-------~t~~~~~~~~~~l~~~~~Y 74 (99)
T d1y6kr1 5 PSPPSVWFEAEF---FHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQ-------TLSYDLTAVTLDLYHSNGY 74 (99)
T ss_dssp CCCSCEEEEEET---TEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEES-------SSEEECGGGGTTGGGSSCE
T ss_pred CCCCcceEEEEC---CEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEeecc-------ccccceeeeeeecCCCCEE
Confidence 358889987665 47999997543322 4678887665555555533211 0111112347799999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
++||..
T Consensus 75 ~fRVrA 80 (99)
T d1y6kr1 75 RARVRA 80 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.44 E-value=0.19 Score=37.24 Aligned_cols=32 Identities=19% Similarity=0.040 Sum_probs=24.6
Q ss_pred EEEecCCCCCCEEEEEeCc------C---CceeeEEEECCC
Q 045849 79 HCTIRHLEFNTKYYYVVGI------G---HTERQFWFVTPP 110 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~v~~------~---~~s~~~~F~t~p 110 (320)
..+|+||+|+|.|.++|.. + ..+....|+|.|
T Consensus 156 ~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 156 SLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp EEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 5789999999999999964 1 134667788875
|