Citrus Sinensis ID: 045882
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 832 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LRA7 | 867 | Probable alpha,alpha-treh | yes | no | 0.998 | 0.958 | 0.698 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.998 | 0.965 | 0.688 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.989 | 0.961 | 0.683 | 0.0 | |
| O23617 | 862 | Alpha,alpha-trehalose-pho | no | no | 0.997 | 0.962 | 0.623 | 0.0 | |
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | no | no | 0.991 | 0.959 | 0.622 | 0.0 | |
| Q9LMI0 | 851 | Probable alpha,alpha-treh | no | no | 0.992 | 0.970 | 0.607 | 0.0 | |
| Q9ZV48 | 862 | Probable alpha,alpha-treh | no | no | 0.956 | 0.923 | 0.616 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.853 | 0.968 | 0.342 | 1e-135 | |
| Q54NU9 | 790 | Alpha,alpha-trehalose-pho | no | no | 0.856 | 0.902 | 0.333 | 1e-122 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.889 | 0.900 | 0.342 | 1e-119 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1264 bits (3272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/843 (69%), Positives = 707/843 (83%), Gaps = 12/843 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M+SRSC N +DLAS D++ FPQT RALPR MTV G+I E DG S+ + + S ++
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRER 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVAN LPL A+++ E+G WCFS+D+DSLLLQ++DGFSSDT+ Y+GSL D+ SEQE
Sbjct: 61 KIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQE 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EV+ KLL +FNCVPTFL ++Q+KFY GFCK +LWPLFHYMLP+ PD+G RFDR LW+AY
Sbjct: 121 EVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAY 180
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+F+D++MEVINPEEDYVWIHDYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+++L+ LLN DLIGFHTFDYARHFLSCCSRMLGLDYESKRG+IGL+YFGRT+++K
Sbjct: 241 TLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIK 300
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VGIHMGRLES LN PS++ K+KEI+EQFKGKK+I+GVDDMDIFKGISLKL+AME+L
Sbjct: 301 ILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLF 360
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ + ++GKLVL+QIVNPAR+TGKDV++AK ETY+ KRINE YG GY+PVILIDR VP
Sbjct: 361 ETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVP 420
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+EKTAYYA+A+CC+VNAVRDGMNL+PYKY ICRQGTP MD+AM ++ RTSMLV+SE
Sbjct: 421 RYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A++ A+TM + EK+LRHEKHY Y+ +HDV YWA SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSF 540
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
MQDLERACR+HY+KRCWGIGFGLS LS+D IV Y+ T RRAIFLDYDG
Sbjct: 541 MQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDG 600
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T+VP ++IK P+ +V+ VL+ LCGD NT F+VSGRG SL +WL+PCENLGIAAEHGY
Sbjct: 601 TLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGY 660
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW+ K EWET +A+ EWK + EPVM+ Y +ATDGS IE KE+ALVWH+QDA P FG
Sbjct: 661 FIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFG 720
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
+CQAKELLDHLESVLANEPVVVKRG +IVEVKPQGV+KGL EKV+ M+ DG PD V+
Sbjct: 721 ACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMVM 780
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
C+GDDRSDEDMFESI LP+ PEIFACTVG+KPSKA+Y+LDD DVL LL GLA
Sbjct: 781 CIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGLA 840
Query: 829 AAS 831
AA+
Sbjct: 841 AAT 843
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1243 bits (3215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/843 (68%), Positives = 696/843 (82%), Gaps = 12/843 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M S+S NL+DLAS D++ PQTPR LPR MTV G+I + DG +D +SD S ++
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRER 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVANFLPL+ +K+ E+G W FS D+DS LL +KDGFS +T+V YVGSLK VD SEQ+
Sbjct: 61 KIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQD 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EV+ L +EFNCV TFL D+ KKFY GFCKQ LWPLFHYMLP+CPD+G RFDR LW+AY
Sbjct: 121 EVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAY 180
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+FADK+M VIN EEDY+WIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR E+L+ LLN DLIGFHTFDYARHFLSCC RMLGL+YESKRG+I L+Y GRT+++K
Sbjct: 241 TLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLK 300
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL +GIHMGRLES LN P+++ K+KEI+E+++GKK+I+GVDDMDIFKG+SLK+LA E LL
Sbjct: 301 ILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLL 360
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ +P + GK+VL+QIVNPAR +GKDVQ+A+ ETY KRINE YG YEPV+LIDRPVP
Sbjct: 361 QQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVP 420
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
EK+AYYALAECCIVNAVRDGMNL+PYKYT+CRQGTP M++++ ++ PRTS LV+SE
Sbjct: 421 RFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWD+DAVAD+L+ AITMSD EKQLRH+KH+ YI +HDV YWA SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSF 540
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
QDLERA RDHYSKRCWG+G+GL LS+++ V AY+R+S+RAIFLDYDG
Sbjct: 541 SQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDG 600
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T+VP +++K PS +VI L+ LC D NNT FIVSGRGKVSL EWLAPCENLGIAAEHGY
Sbjct: 601 TLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGY 660
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
+ RW K S+WETS ++ D EWK++ EP+M+LYTE TDGS IE KE+ALVWH+QDA P FG
Sbjct: 661 FTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFG 720
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKELLDHLE+VL NEPV+V RG+ IVEVKPQGV+KGLV K+LS M+ DG PDFV+
Sbjct: 721 SCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFVV 780
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
C+GDDRSDE+MFE+IS S ++ EIFACTVG+KPSKA+Y+LD+ DV+ LL+GLA
Sbjct: 781 CIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLA 840
Query: 829 AAS 831
S
Sbjct: 841 NTS 843
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1234 bits (3192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/840 (68%), Positives = 697/840 (82%), Gaps = 17/840 (2%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M+SRSC N +DL+S D++ FPQTPR LPR MTV G+I + DG+ +++ S S R ++
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTSTSGGSR--ER 58
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVAN LPL ++++ E+G WCF++D+DSL LQ++DGFSS+T+ YVGSL VD++T+EQE
Sbjct: 59 KIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQE 118
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EV+QKLL+EFNCV TFLS +LQ+ FY GFCK LWPLFHYMLP+ PD+G RFDR LW+AY
Sbjct: 119 EVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAY 178
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+F+D++MEVINPE+DYVWI DYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIYR
Sbjct: 179 VSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 238
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EIL+ LLN DLIGFHTFDYARHFLSCCSRMLGLDYESKRG+IGL+YFGRT+Y+K
Sbjct: 239 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 298
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VG+HMGRLES L+ S++ K KEI+EQFKGKK+++G+DDMDIFKGISLKL+AME L
Sbjct: 299 ILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLF 358
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ + L+GK+VLVQIVNPARS+GKDV++AK ETY +RINE YG Y+P++LIDR VP
Sbjct: 359 ETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVP 418
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
EKTAYYA A+CC+VNAVRDGMNL+PYKY +CRQGT + ++A+ +S PRTS LV+SE
Sbjct: 419 RSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGT-RSNKAVVDSS--PRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A++ A+ MS+ EKQLRHEKHY YI +HDV YWA SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
MQDLERACRDHYSKRCWGIGFGL LSV+ IV Y++T RRAIFLDYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T+VP ++++ PS +V+ VL+ LC D NNT FIVSGRG+ SL WL+PCENLGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW K EWET D EW+ + EPVM+ Y EATDG+ IE KE+ALVWH+QDA P FG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKE+LDHLESVLANEPVVVKRG +IVEVKPQGV+KGL AEKV+ M+ G+ P+ V+
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVM 775
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
C+GDDRSDEDMFESI L + PE+FACTVG+KPSKA+Y+LDDE DVL LL+GL
Sbjct: 776 CIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLG 835
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/844 (62%), Positives = 654/844 (77%), Gaps = 14/844 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADG-NESNDENSDSPSYRHHK 59
M+SRS NL+DLAS + F + + PR TV GV+ E D N SN SD+PS
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQD 60
Query: 60 KKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQ 119
+ IIV N LP+ + +N +G FS+D+DSLLLQ+KDG D +V Y+G LK +DT EQ
Sbjct: 61 RIIIVGNQLPIKSHRN-SAGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQ 119
Query: 120 EEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRA 179
++V+Q+LL+ F CVP ++ +L K+YHGFCKQ+LWPLFHYMLP+ PD G RFDR LW+A
Sbjct: 120 DDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQA 179
Query: 180 YVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIY 239
Y+S NK+FADK+MEVI+P++D+VW+HDYHLMVLPTFLR+RF+RVKLGFFLHSPFPSSEIY
Sbjct: 180 YLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 239
Query: 240 RTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYV 299
RTLPVRNE+L+ALLNADLIGFHTFDYARHFLSCCSRMLGL Y+SKRG IGLEY+GRT+ +
Sbjct: 240 RTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSI 299
Query: 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQL 359
KIL VGIH+ +L+S LN P + KV E+R+QF +KV++GVDDMDIFKGISLKLLAMEQL
Sbjct: 300 KILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQL 359
Query: 360 LKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419
L HPE +G++VLVQI NPAR GKDVQ+ + ET KRINE +G PGY+PV+LID P+
Sbjct: 360 LTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPL 419
Query: 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS 479
E+ AYY +AECC+V AVRDGMNL+PY+Y ICRQG PK++E + L + SMLV+S
Sbjct: 420 QFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVVS 479
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHS 539
EFIGCSPSLSGAIRVNPW+IDAV +A+ A+ +S+ EKQ+RHEKH++Y+ +HDVAYWA S
Sbjct: 480 EFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARS 539
Query: 540 FMQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYD 587
F+QDLERAC DH KRCWGIGFGL LS++ IV AYKRT RAI LDYD
Sbjct: 540 FIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYD 599
Query: 588 GTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHG 647
GT+V ++ P+R+ I +L L D N ++VSG+ + +L EW + C++LG+ AEHG
Sbjct: 600 GTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHG 659
Query: 648 YYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGF 707
Y++R ++WETS++ + FEWK+I EPVM+LYTE TDGS IE KETALVW+YQ A P F
Sbjct: 660 YFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDF 719
Query: 708 GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFV 767
GSCQAKEL++HLESVL N+PV VK G +VEVKPQGV KGLVAE++L+TM GKL DF+
Sbjct: 720 GSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDFI 779
Query: 768 LCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGL 827
LCVGDDRSDEDMFE I A G +L EIFACTVGQKPSKA+YYLDD +++ +L GL
Sbjct: 780 LCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGL 839
Query: 828 AAAS 831
AA +
Sbjct: 840 AATN 843
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/860 (62%), Positives = 658/860 (76%), Gaps = 35/860 (4%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M+SRS NL++LAS D F + R +PR M V G++ D N+S D + SP R
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNID-NDSKDTDL-SPKDR---- 54
Query: 61 KIIVANFLPLHAQKNLESG-------------NWCFSFDDDSLLLQMKDGFSSDT-DVFY 106
IIVAN LP+ AQ+ ++ W FS+D++SLLLQ+KDG + +V Y
Sbjct: 55 IIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIY 114
Query: 107 VGSLKVDVDTSEQEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICP 166
VG LK ++ +EQEEV Q LL+ F CVPTFL DL ++YHGFCKQ LWPLFHYMLP+ P
Sbjct: 115 VGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSP 174
Query: 167 DYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLG 226
D G RFDR LW+AYVS NK+FAD+IMEVINPE+D+VWIHDYHLMVLPTFLR+RF+RVKLG
Sbjct: 175 DLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 234
Query: 227 FFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRG 286
FFLHSPFPSSEIY+TLP+R E+L+ALLN+DLIGFHTFDYARHFLSCCSRMLGL YESKRG
Sbjct: 235 FFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG 294
Query: 287 YIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKVIVGVDDMD 344
YIGLEY+GRT+ +KIL VGIHMG+L+S L+ P + KV E+ E++ KG+ +++GVDDMD
Sbjct: 295 YIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMD 354
Query: 345 IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETY 404
IFKGI+LKLLAMEQLL HPE QGK+VLVQI NPAR GKDV++ + ETY+ KRINET+
Sbjct: 355 IFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETF 414
Query: 405 GVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAM 464
G PGY+P++LID P+ +E+ AYY +AECC+V AVRDGMNL+PY+Y + RQG K+D+ +
Sbjct: 415 GRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKIL 474
Query: 465 EL-ASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEK 523
+L A+ + SMLV+SEFIGCSPSLSGAIRVNPW++DAVADA+ A+ +++ EKQLRHEK
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEK 534
Query: 524 HYRYICSHDVAYWAHSFMQDLERACRDHYSKRCWGIGFGLS------------LSVDRIV 571
HY+Y+ +HDV YWA SF+QDLER+C +H +RCWGIGFGLS LS++ IV
Sbjct: 535 HYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIV 594
Query: 572 DAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLG 631
AYKRT RAI LDYD T++P ++ K+PS I +L LC D N FIVS + + +L
Sbjct: 595 SAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLS 654
Query: 632 EWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEK 691
+W +PCE LGIAAEHGY+LR K EWE A D WK+I EPVM+LYTE TDGS IE
Sbjct: 655 DWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIED 714
Query: 692 KETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAE 751
KETALVW Y+DA P FGSCQAKELLDHLESVLANEPV VKRG N VEVKPQGV+KGL+A
Sbjct: 715 KETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIAR 774
Query: 752 KVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKAR 811
++LS M G LP+FVLC+GDDRSDEDMFE I +T G S+ EIFACTVGQKPSKA+
Sbjct: 775 RMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAK 834
Query: 812 YYLDDEEDVLALLKGLAAAS 831
YYLDD +++ L+ GLA+ +
Sbjct: 835 YYLDDTTEIVRLMHGLASVT 854
|
Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/844 (60%), Positives = 643/844 (76%), Gaps = 18/844 (2%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M+SRS NL+DLAS + + R LPR MTV G + E D +++ +SD+PS +
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDR 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
IIVAN LPL A+K +G+W FS+D DSL LQ+KDG D ++ YVGSL VDVD++EQ+
Sbjct: 61 MIIVANRLPLKAEK--RNGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQD 118
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
+VAQ LLD+F CVPTF DLQ KFY GFCK+ +WPLFHYMLP D+G RFDR LW AY
Sbjct: 119 DVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAY 178
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
V+ NK+F K++EVINP++D+VWIHDYHLMVLPTFLRRRF+R+++GFFLHSPFPSSEIYR
Sbjct: 179 VATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYR 238
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
+LPVR EILKALLN+DLIGFHTFDYARHFL+CCSRMLGL+Y+SKRGYIGLEY+GRT+ +K
Sbjct: 239 SLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIK 298
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
I+ VGI+MGR++S + + KV E+R +F+GK V++G+DDMDIFKGI+LKLLAMEQ+L
Sbjct: 299 IMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQML 358
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ HP +G+ VLVQIVNPAR G DV++ + E +RIN +G PGY+P+I ID PV
Sbjct: 359 RQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVS 418
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
++E AYY +AEC +V AVRDGMNL PY+Y +CRQG + P+ SMLV SE
Sbjct: 419 INEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGLLGSESDFS----GPKKSMLVASE 474
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPW+++A +AL++A++MSD EKQLRHEKH+RY+ +HDVAYW+ SF
Sbjct: 475 FIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRSF 534
Query: 541 MQDLERACRDHYSKRCWGIG--FGL----------SLSVDRIVDAYKRTSRRAIFLDYDG 588
+QDLER C DH+ KRCWG+G FG LS+ IV YKR RAI LDYDG
Sbjct: 535 LQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYDG 594
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T++P +++ K PS++V+ L LC D N+ FIVSGRG+ SL +W PC+ +GIAAEHGY
Sbjct: 595 TLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHGY 654
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
+L+W+ EWET ++DF W +I EPVMK YTE+TDGS IE KE+ALVW Y+DA PGFG
Sbjct: 655 FLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFG 714
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
S QAKE+L+HLESVLANEPV VK G+ IVEVKPQGV+KG V+EK+ S+M GK DFVL
Sbjct: 715 SLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDFVL 774
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
C+GDDRSDEDMFE+I A L +FACTVGQKPSKA+YYLDD +V +L+ LA
Sbjct: 775 CIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLESLA 834
Query: 829 AASK 832
AS+
Sbjct: 835 EASE 838
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1050 bits (2716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/813 (61%), Positives = 624/813 (76%), Gaps = 17/813 (2%)
Query: 33 VQGVIPEADGNESNDENSDSPSYRHHKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLL 92
+ + + G E++D N + + K+I+V+N LPL A +++ S WCF FD+DSL L
Sbjct: 26 IPNAVTKLSGLETDDPNGGA--WVTKPKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYL 83
Query: 93 QMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQ 152
Q+KDGF +T+V YVGSL DV SEQE+V+Q LL++F CVPTFL SDL K+YHGFCK
Sbjct: 84 QLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKH 143
Query: 153 YLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVL 212
YLWP+FHY+LP+ G FDR WRAY + NK+FADKI EV+NP++DYVWIHDYHLM+L
Sbjct: 144 YLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMIL 203
Query: 213 PTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSC 272
PTFLR RFHR+KLG FLHSPFPSSEIYRTLPVR+EILK LN DL+GFHTFDYARHFLSC
Sbjct: 204 PTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSC 263
Query: 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFK 332
CSRMLGLDYESKRGYIGLEYFGRT+ +KIL VGIHMG++ES ++ KVK +RE+FK
Sbjct: 264 CSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQIESIKASEKTAEKVKRLRERFK 323
Query: 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLE 392
G V++GVDD+D+FKGISLK AM QLL+ + EL+GK+VLVQI NPARS+GKDVQD + +
Sbjct: 324 GNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQ 383
Query: 393 TYTITKRINETYGVP-GYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYT 451
I IN +G P GY+P++ I+ PV +K AYYA++EC +VNAVRDGMNL+PYKYT
Sbjct: 384 INLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYT 443
Query: 452 ICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAIT 511
+ RQG+P +D A+ R S++++SEFIGCSPSLSGAIRVNPW+IDAV +A+ A+T
Sbjct: 444 VTRQGSPALDAALGFGEDDVRKSVIIVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMT 503
Query: 512 MSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRDHYSKRCWGIGFGLSLSV---- 567
MSD EK LRH+KH++YI SH+VAYWA S+ QDL+RAC+DHY+KR WG+GFGL V
Sbjct: 504 MSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALD 563
Query: 568 --------DRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTT 619
+ IV AY+R+S R I LDYDGT++ L K+PS D+I +L LC D +N
Sbjct: 564 PNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLV 623
Query: 620 FIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKL 679
FIVSGRGK L +W C NLGI+AEHGY+ RW S WETS + AD WK+I +PVM
Sbjct: 624 FIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNH 683
Query: 680 YTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEV 739
Y EATDGS+IE+KE+A+VWH+Q+A FGS QAKELLDHLESVL NEPVVVKRG +IVEV
Sbjct: 684 YMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEV 743
Query: 740 KPQGVTKGLVAEKVLSTM-ISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEI 798
KPQGV+KG V E +++TM + GK PDF+LC+GDDRSDEDMF+SI + SS+ + E+
Sbjct: 744 KPQGVSKGKVVEHLIATMRNTKGKRPDFLLCIGDDRSDEDMFDSIVKHQDVSSIGLE-EV 802
Query: 799 FACTVGQKPSKARYYLDDEEDVLALLKGLAAAS 831
FACTVGQKPSKA+YYLDD V+ +L+ LA+AS
Sbjct: 803 FACTVGQKPSKAKYYLDDTPSVIKMLEWLASAS 835
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/766 (34%), Positives = 432/766 (56%), Gaps = 56/766 (7%)
Query: 62 IIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEE 121
I+V+N LP+ +K +G W L+ + G S+ +VG + +++ +++E
Sbjct: 19 IVVSNRLPVSIKKE-SNGKWSCKMSSGGLVAAL-SGLKSN--FIWVGWIGAEIEEDDRKE 74
Query: 122 VAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYV 181
+ + L +++C+P FLS + + Y+GF LWPLFHY LP DY D +W +YV
Sbjct: 75 IKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLDY----DDRIWNSYV 129
Query: 182 SANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT 241
AN+ F+ + E++ P D VW+HDYH+M+LP L+++ ++GFFLH PFPSSEI+R
Sbjct: 130 EANEQFSSVVAEILKPN-DLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIFRV 188
Query: 242 LPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKI 301
LP R EIL +LN LIGFHT+DYARHFL C+R++GL+ G+ + R + V +
Sbjct: 189 LPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQVGV 244
Query: 302 LHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLK 361
VGI + +L ++KE++E F+G KV++G+D +D KGI KL A+E+L +
Sbjct: 245 FPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQ 304
Query: 362 VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPL 421
+PE +GKLVL+Q+ P+R ++ Q K E + RIN YG GY P+ + + V
Sbjct: 305 KYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDP 364
Query: 422 HEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF 481
E TA Y +++ ++ ++RDGMNL+ +Y +C+ +L++SEF
Sbjct: 365 SELTALYNISDAALITSIRDGMNLVAQEYIVCQ---------------TENNGVLILSEF 409
Query: 482 IGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541
G + SLSGA+ +NPW+ + VAD++H+++ M E++ +H+ +Y+ H ++W F+
Sbjct: 410 TGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 542 QDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHAL--IKK 599
++L +A + + + I L ++++VD YK++ RR + YDGT++P++ + + +
Sbjct: 470 KELNKASSN--TDKMVTIQ---KLDIEKVVDIYKQSKRRLLIFAYDGTLIPYNNVPQLSR 524
Query: 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWE 659
PS++++ L D +I+SGR K +L EW + +G++AE+G + + + +EWE
Sbjct: 525 PSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-IGLSAEYGCFFKLPESTEWE 583
Query: 660 TSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHL 719
+ D WK P+ K +T T GS+ E+KE WHY++A P FGS QA+EL HL
Sbjct: 584 QQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARELHLHL 643
Query: 720 ESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDM 779
+ N P+ V G + V+ + +KV++ I G D +L +GD
Sbjct: 644 D----NLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTIPKGL--DLILLIGDTH----- 692
Query: 780 FESISQATYGSSLP-IAPEIFACTVGQKPSKARYYLDDEEDVLALL 824
+ S LP +IF +VG+K K Y+L D +V L+
Sbjct: 693 -------IHPSELPTFDGKIFNISVGKKSVKDSYHLSDPAEVNYLI 731
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54NU9|TPSB_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] B OS=Dictyostelium discoideum GN=tpsB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 265/795 (33%), Positives = 416/795 (52%), Gaps = 82/795 (10%)
Query: 53 PSYRHHKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKV 112
PS K I N P Q LE+ L+ KD D ++G
Sbjct: 61 PSRDRESKIQIQINGHPFPTQSALET-------------LKAKDEIE---DWLWIGWSHC 104
Query: 113 DVDTSEQEEVAQKLLDEFN--CVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGF 170
+V+ E E + + + EF+ FL+ + +Y G+CK LW L HY +
Sbjct: 105 EVNEDE-EPMLNQAIKEFSPHFEHVFLNPRQFENYYKGYCKNGLWLLLHYQMNFI----- 158
Query: 171 RFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFH-RVKLGFFL 229
R W YV N++FA+KI V P D +WIHDYHLM++P LR+ +GFF
Sbjct: 159 RMQSEWWEEYVGVNQMFAEKIASVWRPS-DIIWIHDYHLMLVPQMLRQLLPPEASIGFFF 217
Query: 230 HSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIG 289
H+PFPS E++R LP R E+LK +L+++LIGF +F+Y RHF S C+R+L L+ K G
Sbjct: 218 HAPFPSYELFRILPNRKELLKGILSSNLIGFQSFEYVRHFKSSCARLLDLEVHPK----G 273
Query: 290 LEYF--GRTIYVK--ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDI 345
LE F G T + K + +G+ LN P S +V+ +R+ FKGKKV+V D +D
Sbjct: 274 LEIFEDGSTHFTKLQVYPIGVDYNDFAKNLNLPEVSSRVESLRKIFKGKKVVVARDRLDQ 333
Query: 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITK---RINE 402
+G+ KL EQLL HPE GKLV +QI P G + + K+ T+ + RIN
Sbjct: 334 IEGVPRKLEVFEQLLNDHPEYIGKLVFIQIYEPTVEEGDETDEQKILHKTVNEMVGRING 393
Query: 403 TYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDE 462
+G + P+ I++ + E +A Y LA+ ++ +RDGMNL ++Y +C++
Sbjct: 394 KFGKLSFNPIEYINKKISYEELSALYKLADIALITPIRDGMNLTSHEYVVCQKDN----- 448
Query: 463 AMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHE 522
+L++SEF G + L G+I VNP+ + +A+ +A+ MS +++L+H+
Sbjct: 449 ----------FGVLILSEFAGAARCLGGSIIVNPFSKKEIMEAIIEALNMSMHDRKLKHQ 498
Query: 523 KHYRYICSHDVAYWAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDR-----IVDAYKRT 577
+Y Y+ ++ ++W F+ DL A + + SV R I D+YK+
Sbjct: 499 INYNYVLANTSSFWGKRFLCDLNEATQKEI----------METSVPRANFQEIEDSYKKA 548
Query: 578 SRRAIFLDYDGTVVPHHALIKK--PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLA 635
R FLDYDGT+ P L + PS+ +I VL +L D N +++SGR + SL +WL
Sbjct: 549 KVRVFFLDYDGTLTPLVRLPSQAMPSKQLIDVLSKLTEDRRNEVYVISGRDRSSLEKWLG 608
Query: 636 PCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETA 695
+G++ EHG + R +++ T + A+ +WK +M+ + + T GS E K+
Sbjct: 609 HLP-IGMSCEHGVFTRQPGENQPWTESPNAEVQWKDTVLSIMQDFEDRTPGSMTETKQVN 667
Query: 696 LVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLS 755
+ WHY++A P FG QAKEL+ L SV P+ + G +EVKP G+ KG + + +L
Sbjct: 668 ITWHYRNADPDFGQFQAKELIAQLRSVANKYPLDILSGKKAIEVKPIGINKGEIVKMILQ 727
Query: 756 TMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLD 815
+ + DF+LC+GDD++DEDMF+++ + I C ++ +KAR ++
Sbjct: 728 KIDA-----DFILCIGDDKTDEDMFKALYNVPSFT-------IRVCGDLEESTKARGVVE 775
Query: 816 DEEDVLALLKGLAAA 830
+VL LL L+ +
Sbjct: 776 SSSEVLTLLNRLSLS 790
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 271/791 (34%), Positives = 428/791 (54%), Gaps = 51/791 (6%)
Query: 62 IIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEE 121
++VAN LP+ A++ E+ +W L+ + G +S D +VG VDV ++
Sbjct: 15 LVVANRLPVSAKRTGEN-SWSLEMSPGGLVSGLL-GITSQFDTKWVGWPGVDVHDEIEKN 72
Query: 122 VAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYM-LPI--CPDYGFRFDRLLWR 178
+ L E C+P FL+ + ++Y+G+C LWP+ H+M LP D F+ +
Sbjct: 73 ALTESLAEMKCIPVFLNG-VFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFE-TQYD 130
Query: 179 AYVSANKVFADKIMEVINPEE-DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSE 237
AY AN++F D I++ N EE D VW HDYHLM LP +L+ +++K+G+FLHSPFPSSE
Sbjct: 131 AYKKANRMFLDVIID--NYEEGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSE 188
Query: 238 IYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTI 297
+Y+TLP R+E+L+A+L ADL+GFHT+D+ARHFLS C+R+LG++ + G+ Y GR
Sbjct: 189 VYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHE----GVVYQGRVT 244
Query: 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAME 357
V + +GI R P + ++ E++E+F GKKVI+GVD +D+ KGI K LA E
Sbjct: 245 RVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAFE 304
Query: 358 QLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDR 417
+ L+ +P + K+VLVQI P R+ + + K + + + RIN +G P+ +D
Sbjct: 305 KFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLDC 364
Query: 418 PVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLV 477
V + A YA+A+ +V ++RDGMNL+ Y++ C++ + +LV
Sbjct: 365 SVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEA---------------KKGVLV 409
Query: 478 ISEFIGCSPSLS-GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYW 536
+SEF G SL GA+ VNPWD+ V+ A+ +A+ M E++ RH +++Y+C+H W
Sbjct: 410 LSEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKW 469
Query: 537 AHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVV-PHHA 595
FM +L + + L L ++ Y +++ R I L + GT+ P ++
Sbjct: 470 GLDFMSELNGIIPESEMQMR---KIPLQLPEQDVIQQYSQSNNRLIILGFFGTLAEPMNS 526
Query: 596 LIK----KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLR 651
K K + ++ L+ LC D T ++S GK L + N+ +AAE+G + +
Sbjct: 527 GTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKNFGES-NIWLAAENGMFEK 585
Query: 652 WTKKSEWETSTVA-ADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSC 710
T EW T+ + +W + V K +T+ T SY E ET+LVW+Y+ A FG
Sbjct: 586 QT-TGEWVTNMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEASETSLVWNYEYADVEFGRA 644
Query: 711 QAKELLDHL-ESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLP---DF 766
QA++LL +L ++N V V RG + VEV G TKG ++L ++ + DF
Sbjct: 645 QARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKSMTTPIDF 704
Query: 767 VLCVGDD-RSDEDMFESISQATYGSSLPIAPEI-----FACTVGQKPSKARYYLDDEEDV 820
V C G DED++ S P ++ F+ +GQ +KARY +D V
Sbjct: 705 VFCSGYFLEKDEDIYTFFESKILSSKSPNGLDLKKENYFSAAIGQARTKARYVIDSAHGV 764
Query: 821 LALLKGLAAAS 831
+ LL LA +
Sbjct: 765 VDLLHKLAVVA 775
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 832 | ||||||
| 255540727 | 861 | trehalose-6-phosphate synthase, putative | 0.998 | 0.965 | 0.773 | 0.0 | |
| 225457083 | 862 | PREDICTED: probable alpha,alpha-trehalos | 0.998 | 0.964 | 0.768 | 0.0 | |
| 224121670 | 857 | predicted protein [Populus trichocarpa] | 0.996 | 0.967 | 0.766 | 0.0 | |
| 224135783 | 865 | predicted protein [Populus trichocarpa] | 0.998 | 0.960 | 0.758 | 0.0 | |
| 147861933 | 857 | hypothetical protein VITISV_024248 [Viti | 0.995 | 0.966 | 0.731 | 0.0 | |
| 225424707 | 860 | PREDICTED: probable alpha,alpha-trehalos | 0.995 | 0.962 | 0.731 | 0.0 | |
| 255560009 | 861 | trehalose-6-phosphate synthase, putative | 0.998 | 0.965 | 0.723 | 0.0 | |
| 209573856 | 861 | trehalose 6-phosphate synthase [Gossypiu | 0.998 | 0.965 | 0.727 | 0.0 | |
| 55792824 | 861 | trehalose 6-phosphate synthase [Gossypiu | 0.998 | 0.965 | 0.722 | 0.0 | |
| 55792822 | 861 | trehalose 6-phosphate synthase [Gossypiu | 0.998 | 0.965 | 0.721 | 0.0 |
| >gi|255540727|ref|XP_002511428.1| trehalose-6-phosphate synthase, putative [Ricinus communis] gi|223550543|gb|EEF52030.1| trehalose-6-phosphate synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1381 bits (3574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/843 (77%), Positives = 740/843 (87%), Gaps = 12/843 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M+SRSCINL++L S DM+ P+TPR++PR MTV G++ + DG+ SND +SD+PS KK
Sbjct: 1 MVSRSCINLLELPSGDMLNLPRTPRSIPRVMTVPGILSDTDGDGSNDGDSDTPSSGCQKK 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVANFLPL+AQK+ +SG W FSFD+++LLLQMKDGFS DT+V YVGSLK DVDTSEQE
Sbjct: 61 KIIVANFLPLNAQKDSKSGKWTFSFDEEALLLQMKDGFSIDTEVVYVGSLKADVDTSEQE 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EV+QKLLDEFNCVPTFLS DL K FYHGFCK +LWPLFHYMLP+CPD+G RF++LLW+AY
Sbjct: 121 EVSQKLLDEFNCVPTFLSPDLYKMFYHGFCKHHLWPLFHYMLPMCPDHGDRFNKLLWQAY 180
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+FADK+MEVINPE+DYVW+HDYHLMVLPTFLR+RF+RVKLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMEVINPEDDYVWVHDYHLMVLPTFLRKRFYRVKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRG+IGLEYFGRT+Y+K
Sbjct: 241 TLPVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLEYFGRTVYIK 300
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VG+HMGRLE ALNHPSSSIKVKEI++QF GKK+IVGVDDMDIFKGISLKLLAMEQLL
Sbjct: 301 ILPVGVHMGRLEYALNHPSSSIKVKEIQKQFAGKKLIVGVDDMDIFKGISLKLLAMEQLL 360
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+PEL+GK+V+VQIVNPARS GKDVQ+A+ ET++ TKRIN +G PGYEPV+LIDRPVP
Sbjct: 361 HHNPELRGKVVMVQIVNPARSAGKDVQEAERETHSTTKRINSIFGFPGYEPVVLIDRPVP 420
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+EKTAYYALAECCIVNAVRDGMNL+PYKY +CRQGT KMDEA+ +AS P S LV+SE
Sbjct: 421 FYEKTAYYALAECCIVNAVRDGMNLIPYKYIVCRQGTSKMDEALGVASGSPHASTLVVSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWD++AVADAL+ A+TMSD+EKQLRHEKHYRYI SHDVAYWA SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVEAVADALNVALTMSDLEKQLRHEKHYRYISSHDVAYWARSF 540
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
MQDLERAC+DHYSKRCWGIGFGL+ LS + I+ AYKRT RRAIFLDYDG
Sbjct: 541 MQDLERACKDHYSKRCWGIGFGLNFRILSLSPSFRKLSNEHIISAYKRTYRRAIFLDYDG 600
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
TVVP +++K PS +VI VL LC D NT FIVSGRGK SL +W A CENLGIAAEHGY
Sbjct: 601 TVVPQTSIVKTPSSEVISVLNSLCSDPKNTVFIVSGRGKDSLSDWFAQCENLGIAAEHGY 660
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RWT+ S WETS++AADF+WK++ EPVMKLYTEATDGSYIE KE+ALVW +QDA P FG
Sbjct: 661 FIRWTRMSNWETSSLAADFDWKKMAEPVMKLYTEATDGSYIEAKESALVWQHQDADPDFG 720
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
S QAKELLDHLE+VLANEPVVVKRG +IVEVKPQGVTKG VAEKVLS MI+ GK PDFV+
Sbjct: 721 SWQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVTKGFVAEKVLSAMIAKGKSPDFVM 780
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
C+GDDRSDEDMFESIS S P APEIFACTVGQKPSKARYYLDD +VLALL+GLA
Sbjct: 781 CIGDDRSDEDMFESISSTASNLSFPSAPEIFACTVGQKPSKARYYLDDTVEVLALLQGLA 840
Query: 829 AAS 831
AS
Sbjct: 841 TAS 843
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457083|ref|XP_002283215.1| PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1368 bits (3540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/844 (76%), Positives = 734/844 (86%), Gaps = 13/844 (1%)
Query: 1 MLSRSC-INLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHK 59
M+SRS + +D AS D++ FPQTPR LPR MTV G+I + DGN SNDE+SD S + +
Sbjct: 1 MVSRSSYTSFLDAASGDLLNFPQTPRTLPRVMTVPGIISDGDGNGSNDEDSDIFSSKCRE 60
Query: 60 KKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQ 119
KKIIVANFLPL AQK+L +G WCFSFD+D+LLLQMKDGFSS+TDV YVGSLKVDVDTSEQ
Sbjct: 61 KKIIVANFLPLLAQKDLNTGRWCFSFDEDALLLQMKDGFSSETDVVYVGSLKVDVDTSEQ 120
Query: 120 EEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRA 179
EEVA++LL EFNCVPTFL DLQKKFYHGFCKQYLWPLFHYMLP+ P++ RFDR LW+A
Sbjct: 121 EEVAERLLAEFNCVPTFLPPDLQKKFYHGFCKQYLWPLFHYMLPMSPEHCNRFDRFLWQA 180
Query: 180 YVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIY 239
YVSANK+FADK+MEVINPEEDYVWIHDYHLM+LPTFLR+RF+RVKLGFFLHSPFPSSEIY
Sbjct: 181 YVSANKIFADKVMEVINPEEDYVWIHDYHLMILPTFLRKRFYRVKLGFFLHSPFPSSEIY 240
Query: 240 RTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYV 299
RTLPVR++ILKALLNADL+GFHTFDYARHFLSCCSRMLGL+YESKRG+IGLEYFGRT+YV
Sbjct: 241 RTLPVRDDILKALLNADLVGFHTFDYARHFLSCCSRMLGLNYESKRGHIGLEYFGRTVYV 300
Query: 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQL 359
KIL VGIHMG+LESALN PS+SIKVKEI+EQFKGKK+I+GVDDMDIFKG+SLKLLAME L
Sbjct: 301 KILPVGIHMGQLESALNLPSTSIKVKEIQEQFKGKKIILGVDDMDIFKGLSLKLLAMEHL 360
Query: 360 LKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419
L+ + EL+G+LVLVQIVNPARSTGKDVQ+AK ETY IT+RIN +G PGYEPV+LID PV
Sbjct: 361 LQHYEELRGELVLVQIVNPARSTGKDVQEAKRETYAITERINANFGFPGYEPVVLIDHPV 420
Query: 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS 479
P +EKTAYYALAECCIVNAVRDGMNLMPY Y +CRQGTPK+DEA+ + S RTS LV+S
Sbjct: 421 PFYEKTAYYALAECCIVNAVRDGMNLMPYNYIVCRQGTPKIDEALGITSGSSRTSTLVVS 480
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHS 539
EFIGCSPSLSGAIRVNPWDIDAVADAL+ AITM +EKQLRHEKHYRY+ SHDVAYWA S
Sbjct: 481 EFIGCSPSLSGAIRVNPWDIDAVADALNIAITMPGLEKQLRHEKHYRYVSSHDVAYWACS 540
Query: 540 FMQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYD 587
FMQDLERAC+DHYSKRCW IGFGLS LS+D IV AYKR +RRAIFLDYD
Sbjct: 541 FMQDLERACKDHYSKRCWSIGFGLSFRIVALSPNFRKLSLDHIVKAYKRANRRAIFLDYD 600
Query: 588 GTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHG 647
GTVVP +++K PS +VI +L +LC D NT FIVSGRGK SL +W A C+NLGIAAEHG
Sbjct: 601 GTVVPQSSIVKTPSPEVISILNDLCNDPKNTVFIVSGRGKNSLSDWFAQCQNLGIAAEHG 660
Query: 648 YYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGF 707
Y++RW++ S WE+ + DF+WKRI +PVM+LYTEATDGSYIE KE+ALVWH+QDA P F
Sbjct: 661 YFIRWSQSSNWESRPLLMDFDWKRIADPVMQLYTEATDGSYIETKESALVWHHQDADPDF 720
Query: 708 GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFV 767
GSCQA ELLDHLE+VLANEPV VKRG++IVEVKPQGV+KG V EK+LSTMISDGK PDFV
Sbjct: 721 GSCQAMELLDHLENVLANEPVEVKRGHHIVEVKPQGVSKGQVTEKILSTMISDGKPPDFV 780
Query: 768 LCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGL 827
+C+GDDRSDEDMFESIS Y SLP PEIFACTVGQKPSKARYYLDD DVL LL+GL
Sbjct: 781 MCIGDDRSDEDMFESISSTIYSPSLPAPPEIFACTVGQKPSKARYYLDDSADVLKLLQGL 840
Query: 828 AAAS 831
A AS
Sbjct: 841 ARAS 844
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|224121670|ref|XP_002318643.1| predicted protein [Populus trichocarpa] gi|222859316|gb|EEE96863.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1362 bits (3525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/844 (76%), Positives = 735/844 (87%), Gaps = 15/844 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M+S SCI+L+DLAS +MM F Q PRALPR MTV G+I + DG+ +ND NSD+PS K
Sbjct: 1 MVSSSCISLLDLASGNMMNFSQAPRALPRIMTVPGIISDIDGDGTNDGNSDAPST---VK 57
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIV+NFLPL+AQK+L+SG W FSFD+DSLLLQMKDGFS +T+V YVGSL+VDVDTSEQE
Sbjct: 58 KIIVSNFLPLNAQKDLKSGKWSFSFDEDSLLLQMKDGFSENTEVVYVGSLRVDVDTSEQE 117
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EV+Q+LL+EFNCVPTF+ S++ K FYHGFCK +LWPLFHYMLP+CPD+G RFDRLLW++Y
Sbjct: 118 EVSQQLLEEFNCVPTFIPSEIYKNFYHGFCKHHLWPLFHYMLPMCPDHGNRFDRLLWQSY 177
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VS NK+FADK+M VIN EEDYVW+HDYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIYR
Sbjct: 178 VSTNKIFADKVMGVINSEEDYVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 237
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EILKALLNADLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGLEYFGRT+Y+K
Sbjct: 238 TLPVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLYYESKRGHIGLEYFGRTVYIK 297
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VGIHMGR+ESALNHPSSSIKVKEI++QFKGK+++VGVDDMDIFKGISLKLLAME LL
Sbjct: 298 ILPVGIHMGRVESALNHPSSSIKVKEIQKQFKGKRLVVGVDDMDIFKGISLKLLAMEHLL 357
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ + ++GKLVLVQIVNPARS+GK VQ+AK+ET+TITKRIN+T+G PGYEPV+LIDR VP
Sbjct: 358 QQNSGMRGKLVLVQIVNPARSSGKAVQEAKMETHTITKRINDTFGFPGYEPVVLIDRHVP 417
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
EKTAY+ALAECCIVNAVRDGMNL+PYKY CRQGTPKMDEA+ +AS TS LV+SE
Sbjct: 418 FCEKTAYFALAECCIVNAVRDGMNLIPYKYIACRQGTPKMDEALGVASGSRHTSSLVVSE 477
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
F GCSPSLSGAIRVNPWDI+AVA+AL+ AITM D+EKQLRHEKHYR++ SHDVAYWA SF
Sbjct: 478 FTGCSPSLSGAIRVNPWDIEAVANALNVAITMPDLEKQLRHEKHYRFVSSHDVAYWARSF 537
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
MQDL RAC DHYSKRCWGIGFGL+ LS D I+ AYKRTS+RAIFLDYDG
Sbjct: 538 MQDLTRACEDHYSKRCWGIGFGLNFRILSLSPSFRKLSNDYIISAYKRTSKRAIFLDYDG 597
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
TVV ++ K PS +VI VL LC D N FIVSGRGK SL +W A CENLGIAAEHGY
Sbjct: 598 TVVAQTSIPKTPSPEVISVLNNLCSDPRNNVFIVSGRGKKSLSDWFAQCENLGIAAEHGY 657
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
+LRW+ S+WET + AADF+WK I EPVMKLYTEATDGSYIE KE+ALVWH+QDA P FG
Sbjct: 658 FLRWSGMSDWETRSFAADFDWKNIAEPVMKLYTEATDGSYIETKESALVWHHQDADPDFG 717
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKELLDHLE+VLAN+PVVVKRG NIVEVKPQGVTKG VAEKVLS+MI++GK PDFVL
Sbjct: 718 SCQAKELLDHLENVLANDPVVVKRGQNIVEVKPQGVTKGFVAEKVLSSMIANGKPPDFVL 777
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
C+GDDRSDEDMFES+S YGSSLP AP IFACTVGQKPSKARYYLDD DVLALL+ LA
Sbjct: 778 CIGDDRSDEDMFESMSNTAYGSSLPSAPAIFACTVGQKPSKARYYLDDTVDVLALLQCLA 837
Query: 829 AASK 832
AS
Sbjct: 838 DASN 841
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135783|ref|XP_002322159.1| predicted protein [Populus trichocarpa] gi|222869155|gb|EEF06286.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1342 bits (3473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/844 (75%), Positives = 727/844 (86%), Gaps = 13/844 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M+SRSCI+L+D AS +MM F Q+PR+LPR MTV G+I + D + ND SD+PS K
Sbjct: 1 MVSRSCISLLDFASGNMMNFSQSPRSLPRIMTVPGIISDVDVDGINDGISDAPSTGSGAK 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
IIV+NFLPL+AQK+L SG W FSFD+DSLLLQMKDGFS+ +V YVGSL+VDVD+SEQE
Sbjct: 61 MIIVSNFLPLNAQKDLNSGKWSFSFDEDSLLLQMKDGFSAIPEVVYVGSLRVDVDSSEQE 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EV+QKLL+EFNCVPTF+ D+ K FYHGFCK +LWPLFHYMLP+CPD+G RFDRLLW+AY
Sbjct: 121 EVSQKLLEEFNCVPTFIPPDIYKNFYHGFCKHHLWPLFHYMLPLCPDHGNRFDRLLWQAY 180
Query: 181 VSANKVFADKIMEVIN-PEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIY 239
VSANK+FADK+ EVIN EEDYVW+HDYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIY
Sbjct: 181 VSANKIFADKVTEVINNTEEDYVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 240
Query: 240 RTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYV 299
RTL VR+EILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRG+IGLEYFGRT+Y+
Sbjct: 241 RTLLVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLEYFGRTVYI 300
Query: 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQL 359
KIL VGIHMGR+ESALNHPSSSIKVKEI+EQFKGK++++GVDDMDIFKGISLKLLA+E L
Sbjct: 301 KILPVGIHMGRVESALNHPSSSIKVKEIQEQFKGKRLVIGVDDMDIFKGISLKLLAVEHL 360
Query: 360 LKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419
L + EL+GKLVLVQIVNPARS+GKDVQ+AK+E Y+ITKRIN T+G PGYEPV+LIDR V
Sbjct: 361 LLQNSELRGKLVLVQIVNPARSSGKDVQEAKMEIYSITKRINNTFGFPGYEPVVLIDRHV 420
Query: 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS 479
P EKTAYYALAECCIVNAVRDGMNL+PYKY +CRQGTPKMDEA+ +AS TS LV+S
Sbjct: 421 PFCEKTAYYALAECCIVNAVRDGMNLIPYKYIVCRQGTPKMDEALGVASGSRHTSSLVVS 480
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHS 539
EF GCSPSLSGAIRVNPWDI+AVA+A++ AI M D+EKQLRH KHY Y+ SHDVAYWA S
Sbjct: 481 EFTGCSPSLSGAIRVNPWDIEAVANAVNTAINMPDLEKQLRHGKHYCYVSSHDVAYWARS 540
Query: 540 FMQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYD 587
FMQDL+RAC+DHYSKRCWGIGFGL+ LS D I+ AYKRTS+RAIFLDYD
Sbjct: 541 FMQDLKRACKDHYSKRCWGIGFGLNFRILALSPSFRKLSNDYIISAYKRTSKRAIFLDYD 600
Query: 588 GTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHG 647
GT+VPH +L K P+ +VI VL LC D N+ FIVSGRGK SL +W CENLGIAAEHG
Sbjct: 601 GTMVPHTSLAKTPTPEVISVLNNLCADPMNSVFIVSGRGKKSLSDWFVQCENLGIAAEHG 660
Query: 648 YYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGF 707
Y+ RW+ S+WETS++A DF+WK I EPVMKLYTEATDGSYIE KE+ALVWH+QDA P F
Sbjct: 661 YFFRWSGMSDWETSSLAVDFDWKNIAEPVMKLYTEATDGSYIEVKESALVWHHQDADPDF 720
Query: 708 GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFV 767
GSCQAKELLDHLE+VLAN+PV VKRG NIVEVKPQGVTKG VAEKVLS MI+ GK P FV
Sbjct: 721 GSCQAKELLDHLENVLANDPVAVKRGQNIVEVKPQGVTKGFVAEKVLSKMIASGKPPGFV 780
Query: 768 LCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGL 827
LC+GDDRSDEDMFESIS+ Y SSLP AP IFACTVGQKPSKARYYLDD DVLALL+ L
Sbjct: 781 LCIGDDRSDEDMFESISKTPYSSSLPSAPAIFACTVGQKPSKARYYLDDTVDVLALLQCL 840
Query: 828 AAAS 831
A AS
Sbjct: 841 ADAS 844
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147861933|emb|CAN78769.1| hypothetical protein VITISV_024248 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1312 bits (3395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/844 (73%), Positives = 713/844 (84%), Gaps = 16/844 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M SRSC N +DLAS +++ P TPR LPR MTV G+I + DG SND +SD H++
Sbjct: 1 MASRSCANFLDLASGNLLDIPHTPRPLPRVMTVPGIISDLDGYGSNDGDSDV----CHER 56
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVAN LPLHAQ++ + WCFS D+D+LLL +KDGFS +T+V YVGSLKV++D SEQE
Sbjct: 57 KIIVANMLPLHAQRDKVTAKWCFSLDEDALLLHLKDGFSPETEVIYVGSLKVEIDASEQE 116
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EVAQKLL++FNCVPTFL DL KKFYHGFCKQ LWPLFHYMLP+CPD+G RFDR+LW+AY
Sbjct: 117 EVAQKLLEDFNCVPTFLPHDLHKKFYHGFCKQQLWPLFHYMLPMCPDHGDRFDRVLWQAY 176
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+FADK+ EVINP++DYVW+ DYHLMVLPTFLR+RFHRVKLGFFLHSPFPSSEIYR
Sbjct: 177 VSANKIFADKVREVINPDDDYVWVQDYHLMVLPTFLRKRFHRVKLGFFLHSPFPSSEIYR 236
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EIL+ LLN DLIGF TFDYARHFLSCCSRMLGLDYESKRG+IGL+Y GRT+Y+K
Sbjct: 237 TLPVRDEILRGLLNCDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGLDYSGRTVYIK 296
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VG+HMGRLES LN S+S K+KEI++QF+GKK+I+GVDDMDIFKGISLK LA+EQLL
Sbjct: 297 ILPVGVHMGRLESVLNLHSTSTKIKEIQKQFEGKKLILGVDDMDIFKGISLKFLAVEQLL 356
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ HPELQGKLVLVQIVNPARSTGKDVQ+AK ETY +RINETYG P YEPVILIDRPV
Sbjct: 357 QQHPELQGKLVLVQIVNPARSTGKDVQEAKRETYLTAERINETYGSPNYEPVILIDRPVA 416
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+EK+AYYA+AECCIVNAVRDGMNL+PYKY +CRQGTP MD+ + V P TSMLV+SE
Sbjct: 417 RYEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPHMDKETGMNLVSPPTSMLVVSE 476
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWD DAVA+AL+ AITM + EKQLRHEKHYRY+ SHDVAYWA SF
Sbjct: 477 FIGCSPSLSGAIRVNPWDTDAVAEALNLAITMPNSEKQLRHEKHYRYVSSHDVAYWARSF 536
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
M DL+RAC+DHYSKRCWGIG GL LS+D IV YKRT+RRAIFLDYDG
Sbjct: 537 MHDLDRACKDHYSKRCWGIGLGLGFRVVSLSPSFRKLSIDHIVSTYKRTTRRAIFLDYDG 596
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
TVVP ++IK PS +VI VL LC D NT FIVSGRG+ SL EWLAPCE LGIAAEHGY
Sbjct: 597 TVVPQSSIIKSPSPEVISVLSTLCSDPKNTVFIVSGRGRSSLSEWLAPCERLGIAAEHGY 656
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW + ++WE+ +AAD +WK++ EPVM+LYTE TDGS IE KE+ALVWH+QDA P FG
Sbjct: 657 FMRWNESTKWESCNLAADLDWKKVVEPVMRLYTETTDGSNIEIKESALVWHHQDADPDFG 716
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKEL+DHLE+VLANEP VVKRG +IVEVKPQGV+KGLVAEKVLSTM++DGK PDFV+
Sbjct: 717 SCQAKELMDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSTMVNDGKPPDFVM 776
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
C+GDDRSDEDMFE I + SL ++PEIFACTVGQKPSKA+YYLDD DV+ LL+GLA
Sbjct: 777 CIGDDRSDEDMFEGIFRTISSPSLSMSPEIFACTVGQKPSKAKYYLDDTTDVVRLLQGLA 836
Query: 829 AASK 832
AS
Sbjct: 837 TASN 840
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424707|ref|XP_002264873.1| PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1310 bits (3390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/844 (73%), Positives = 712/844 (84%), Gaps = 16/844 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M SRSC N +DLAS ++ P TPR LPR MTV G+I + DG SND +SD H++
Sbjct: 1 MASRSCANFLDLASGSLLDIPHTPRPLPRVMTVPGIISDLDGYGSNDGDSDV----CHER 56
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVAN LPLHAQ++ + WCFS D+D+LLL +KDGFS +T+V YVGSLKV++D SEQE
Sbjct: 57 KIIVANMLPLHAQRDKVTAKWCFSLDEDALLLHLKDGFSPETEVIYVGSLKVEIDASEQE 116
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EVAQKLL++FNCVPTFL DL KKFYHGFCKQ LWPLFHYMLP+CPD+G RFDR+LW+AY
Sbjct: 117 EVAQKLLEDFNCVPTFLPHDLHKKFYHGFCKQQLWPLFHYMLPMCPDHGDRFDRVLWQAY 176
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+FADK+ EVINP++DYVW+ DYHLMVLPTFLR+RFHRVKLGFFLHSPFPSSEIYR
Sbjct: 177 VSANKIFADKVREVINPDDDYVWVQDYHLMVLPTFLRKRFHRVKLGFFLHSPFPSSEIYR 236
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EIL+ LLN DLIGF TFDYARHFLSCCSRMLGLDYESKRG+IGL+Y GRT+Y+K
Sbjct: 237 TLPVRDEILRGLLNCDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGLDYSGRTVYIK 296
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VG+HMGRLES LN S+S K+KEI++QF+GKK+I+GVDDMDIFKGISLK LA+EQLL
Sbjct: 297 ILPVGVHMGRLESVLNLHSTSAKIKEIQKQFEGKKLILGVDDMDIFKGISLKFLAVEQLL 356
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ HPELQGKLVLVQIVNPARSTGKDVQ+AK ETY +RINETYG P YEPVILIDRPV
Sbjct: 357 QQHPELQGKLVLVQIVNPARSTGKDVQEAKRETYLTAERINETYGSPNYEPVILIDRPVA 416
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+EK+AYYA+AECCIVNAVRDGMNL+PYKY +CRQGTP MD+ + V P TSMLV+SE
Sbjct: 417 RYEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPHMDKETGMNLVSPPTSMLVVSE 476
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWD DAVA+AL+ AITM + EKQLRHEKHYRY+ SHDVAYWA SF
Sbjct: 477 FIGCSPSLSGAIRVNPWDTDAVAEALNLAITMPNSEKQLRHEKHYRYVSSHDVAYWARSF 536
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
M DL+RAC+DHYSKRCWGIG GL LS+D IV YKRT+RRAIFLDYDG
Sbjct: 537 MHDLDRACKDHYSKRCWGIGLGLGFRVVSLSPSFRKLSIDHIVSTYKRTTRRAIFLDYDG 596
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
TVVP ++IK PS +VI VL LC D NT FIVSGRG+ SL EWLAPCE LGIAAEHGY
Sbjct: 597 TVVPQSSIIKSPSPEVISVLSTLCSDPKNTVFIVSGRGRSSLSEWLAPCERLGIAAEHGY 656
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW + ++WE+ +AAD +WK++ EPVM+LYTE TDGS IE KE+ALVWH+QDA P FG
Sbjct: 657 FMRWNESTKWESCNLAADLDWKKVVEPVMRLYTETTDGSNIEIKESALVWHHQDADPDFG 716
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKEL+DHLE+VLANEP VVKRG +IVEVKPQGV+KGLVAEKVLSTM++DGK PDFV+
Sbjct: 717 SCQAKELMDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSTMVNDGKPPDFVM 776
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
C+GDDRSDEDMFE I + SL ++PEIFACTVGQKPSKA+YYLDD DV+ LL+GLA
Sbjct: 777 CIGDDRSDEDMFEGIFRTISSPSLSMSPEIFACTVGQKPSKAKYYLDDTTDVVRLLQGLA 836
Query: 829 AASK 832
AS
Sbjct: 837 TASN 840
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|255560009|ref|XP_002521023.1| trehalose-6-phosphate synthase, putative [Ricinus communis] gi|223539860|gb|EEF41440.1| trehalose-6-phosphate synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1309 bits (3388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/843 (72%), Positives = 719/843 (85%), Gaps = 12/843 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M+SRS +N +DLAS +++ P TPR++PR MTV G+I + DG SND +S+ S + ++
Sbjct: 1 MVSRSYVNFLDLASGNLLDIPPTPRSIPRVMTVPGIISDLDGYCSNDGDSEVSSSIYRER 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
+IIVAN LPLHA+K+ E+ WCFS D+DSLLLQ+KDGFS +T+V YVGSLK D+D +EQE
Sbjct: 61 EIIVANMLPLHAKKDTETNKWCFSRDEDSLLLQLKDGFSPETEVIYVGSLKADIDVNEQE 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
E++QKLL++FNCVPTFL DLQKKFY GFCKQ LWP+FHYMLP+CPD+G RFDR++W+AY
Sbjct: 121 EISQKLLEDFNCVPTFLPQDLQKKFYLGFCKQQLWPIFHYMLPMCPDHGDRFDRIIWQAY 180
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+FADK+ME+I+PEEDYVW+HDYHLM+LPTFLR+ ++RVKLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMEIISPEEDYVWVHDYHLMLLPTFLRKSYNRVKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EIL+ LLN DLIGF TFDYARHFLSCCSRMLGLDYESKRG+IGL+YFGRT+Y+K
Sbjct: 241 TLPVRDEILRGLLNCDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VGIHMGRLES +N PS+S KVKEI+E+F G+KVI+G+DDMDIFKGISLKLLAMEQLL
Sbjct: 301 ILPVGIHMGRLESVMNLPSASAKVKEIQEKFSGRKVILGIDDMDIFKGISLKLLAMEQLL 360
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ +P L+G++VLVQIVNPAR +GKDV++AK ETY KRINE YG P YEPVILIDRPVP
Sbjct: 361 EQNPNLRGQVVLVQIVNPARGSGKDVEEAKRETYLTAKRINEVYGSPEYEPVILIDRPVP 420
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+EKTAYYALAECCIVNAVRDGMNL+PYKY +CRQGTP MD+AM + S PRTSM+V+SE
Sbjct: 421 RYEKTAYYALAECCIVNAVRDGMNLVPYKYIVCRQGTPYMDKAMGIKSDSPRTSMIVVSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
F+GCSPSLSGAIRVNPWDIDAVADAL AITM + EKQLRHEKHYRY+ +HDVAYWA SF
Sbjct: 481 FVGCSPSLSGAIRVNPWDIDAVADALSLAITMRESEKQLRHEKHYRYVSTHDVAYWARSF 540
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
MQDLERACRDHY+KRCWGIGFGL L +D IV AYKRTSRRAIFLDYDG
Sbjct: 541 MQDLERACRDHYNKRCWGIGFGLGFRVVSLSPSFRRLGIDHIVSAYKRTSRRAIFLDYDG 600
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
TV+P +++K PS +VI VL+ L D NNT FIVSGRG+ SL EWL PCE LGIAAEHGY
Sbjct: 601 TVIPQTSIVKSPSPEVISVLKTLSDDPNNTVFIVSGRGRDSLSEWLDPCERLGIAAEHGY 660
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW K SEWET+ V+ D +WK I EPVM+LYTEATDGS IE K++ALVWH+QDA P FG
Sbjct: 661 FIRWNKISEWETTPVSDDLDWKNIVEPVMRLYTEATDGSSIEVKDSALVWHHQDADPDFG 720
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKELLDHLE+VLANEP VVKRG +IVEVKPQG++KGLVAEKVL M++ G PDFVL
Sbjct: 721 SCQAKELLDHLENVLANEPAVVKRGQHIVEVKPQGISKGLVAEKVLLNMVNSGNSPDFVL 780
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
C+GDD+SDEDMF+SI +LP APEIFACTVG+KPSKA+YYLDD DV+ LL+GLA
Sbjct: 781 CIGDDKSDEDMFQSILSTVSDPTLPAAPEIFACTVGRKPSKAKYYLDDAADVVKLLQGLA 840
Query: 829 AAS 831
+S
Sbjct: 841 TSS 843
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|209573856|gb|ACI62866.1| trehalose 6-phosphate synthase [Gossypium arboreum] | Back alignment and taxonomy information |
|---|
Score = 1307 bits (3383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/843 (72%), Positives = 717/843 (85%), Gaps = 12/843 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M SRSC N + LAS +++ PQTPR LPR MTV G+I + D SND +SD S ++
Sbjct: 1 MASRSCANFLHLASGNLLDIPQTPRGLPRVMTVPGIISDMDSCSSNDGDSDVASSGCRER 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVAN LPLHA+++ E+ W FS+D+DSLLL +KDGFS + +V YVGSLKVD+D +EQE
Sbjct: 61 KIIVANMLPLHAKRDGETSKWRFSWDEDSLLLHLKDGFSPEMEVVYVGSLKVDIDVNEQE 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EVAQKLL++FNCVPTF+ DLQKKFY GFCKQ+LWPLFHYMLP+CPD+G RFDR+LW+AY
Sbjct: 121 EVAQKLLEDFNCVPTFVPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRILWQAY 180
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+FADK+MEVINP++DYVWIHDYHLMVLPTFLR+ +R+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMEVINPDDDYVWIHDYHLMVLPTFLRKHLNRIKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EIL+ LLN DLIGFHTFDYARHFLSCCSRMLGLDYESKRG+IGL+YFGRT+++K
Sbjct: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIK 300
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VG+HMGRLES LN S++ +VKEI++QF+GKK+I+G+DDMDIFKGISLKLLA+EQLL
Sbjct: 301 ILPVGVHMGRLESVLNLSSTAARVKEIQKQFEGKKLILGIDDMDIFKGISLKLLAVEQLL 360
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ HP+LQGK+VLVQIVNPAR GKDVQ+AK ETY K+INE YG P Y+PVILIDRPVP
Sbjct: 361 QQHPDLQGKIVLVQIVNPARGFGKDVQEAKKETYMTAKKINEVYGSPNYQPVILIDRPVP 420
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+EK+AYYALAECCIVNAVRDGMNL+PYKY +CRQGTP MDEA+ + PRTSMLV+SE
Sbjct: 421 RYEKSAYYALAECCIVNAVRDGMNLVPYKYIVCRQGTPGMDEALGVKPEYPRTSMLVVSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWDIDAVA+AL+ AIT+ + EKQLRHEKHYRY+ +HDVAYWA SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDIDAVAEALNTAITIPESEKQLRHEKHYRYVSTHDVAYWARSF 540
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
+ DL+RAC+DHYSKRCWGIG GLS L++D I AY+RTSRRAIFLDYDG
Sbjct: 541 VMDLDRACQDHYSKRCWGIGLGLSFRVVSLSPNFRRLAIDHICSAYRRTSRRAIFLDYDG 600
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T+VP ++IK PS +VI +++ LC D NT FIVSGRG+ SL +WLAPCE LGIAAEHGY
Sbjct: 601 TLVPEASIIKTPSPEVISIIKTLCDDPKNTVFIVSGRGRASLSDWLAPCEKLGIAAEHGY 660
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW+K SEWETS V AD EWK+I EPVM LY EATDGS IE KE+ LVWH+QDA P FG
Sbjct: 661 FIRWSKDSEWETSPVGADLEWKKIVEPVMSLYREATDGSSIETKESGLVWHHQDADPDFG 720
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKELLDHLESVLANEP VV RG +IVEVKPQGV+KGLVAEKVLS M++ GK PDFV+
Sbjct: 721 SCQAKELLDHLESVLANEPAVVHRGQHIVEVKPQGVSKGLVAEKVLSRMVNGGKPPDFVM 780
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
CVGDD+SDEDMF+SI + SLP+APEIFACTVG+KPSKARYYLDD DVL LLKGLA
Sbjct: 781 CVGDDKSDEDMFQSILTSVSNPSLPVAPEIFACTVGRKPSKARYYLDDTADVLKLLKGLA 840
Query: 829 AAS 831
A+
Sbjct: 841 TAT 843
|
Source: Gossypium arboreum Species: Gossypium arboreum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|55792824|gb|AAV65495.1| trehalose 6-phosphate synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/843 (72%), Positives = 712/843 (84%), Gaps = 12/843 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M SR C N + LAS +++ QTPR LPR MTV G+I + D SND +SD S ++
Sbjct: 1 MASRPCANFLHLASGNLLDISQTPRGLPRVMTVPGIISDMDSCSSNDGDSDVASSGCRER 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVAN LPLHA+++ E+ W FS+D+DSLLL +K GFS +T+V +VGSLKVD+D +EQE
Sbjct: 61 KIIVANMLPLHAKRDRETSKWRFSWDEDSLLLHLKGGFSPETEVVFVGSLKVDIDVNEQE 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
E AQKLL++FNCVPTFL DLQKKFY GFCKQ+LWPLFHYMLP+CPD+G RFDR+LW+AY
Sbjct: 121 EAAQKLLEDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRILWQAY 180
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANKVFADK+MEVINP++DYVWIHDYHL+VLPTFLR+ +R+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKVFADKVMEVINPDDDYVWIHDYHLIVLPTFLRKHLNRIKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EIL+ LLN DLIGFHTFDYARHF SCCSRMLGLDYESKRG+IGL+YFGRT+++K
Sbjct: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFSSCCSRMLGLDYESKRGHIGLDYFGRTVFIK 300
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VG+HMGRLES LN S++ +VKEI++QF+GKK+I+G+DDMDIFKGISLKLLA+EQLL
Sbjct: 301 ILPVGVHMGRLESVLNLSSTAARVKEIQKQFEGKKLILGIDDMDIFKGISLKLLAVEQLL 360
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ HP+LQGK+VLVQIVNPAR GKDVQ+AK ETY K+INE YG P Y+PVILIDRPVP
Sbjct: 361 QQHPDLQGKIVLVQIVNPARGFGKDVQEAKKETYMTAKKINEVYGSPNYQPVILIDRPVP 420
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+EK+AYYALAECCIVNAVRDGMNL+PYKY +CRQGTP MDEA+ + PRTSMLV+SE
Sbjct: 421 CYEKSAYYALAECCIVNAVRDGMNLVPYKYIVCRQGTPGMDEALGVKPEYPRTSMLVVSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWDIDAVA+AL+ AITM + EKQLRHEKHYRY+ +HDVAYWA S
Sbjct: 481 FIGCSPSLSGAIRVNPWDIDAVAEALNTAITMPESEKQLRHEKHYRYVSTHDVAYWARSL 540
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
+ DL+RAC+DHYSKRCWGIG GLS L++D I AY+RTSRRAIFLDYDG
Sbjct: 541 VMDLDRACQDHYSKRCWGIGLGLSFRVVSLSPNFRRLAIDHICSAYRRTSRRAIFLDYDG 600
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T+VP ++IK PS +VI +++ LC D NT FIVSGRG+ SL +WLAPCE LGIAAEHGY
Sbjct: 601 TLVPEASIIKTPSPEVISIIKTLCDDPKNTVFIVSGRGRASLSDWLAPCEKLGIAAEHGY 660
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW+K SEWETS V AD EWK+I EPVM LY EATDGS IE KE+ LVWH+QDA P FG
Sbjct: 661 FIRWSKDSEWETSPVGADLEWKKIVEPVMSLYREATDGSSIETKESGLVWHHQDADPDFG 720
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKELLDHLESVLANEP VV RG +IVEVKPQGV+KGLVAEKVLS M++ GK PDFV+
Sbjct: 721 SCQAKELLDHLESVLANEPAVVHRGQHIVEVKPQGVSKGLVAEKVLSRMVNGGKPPDFVM 780
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
CVGDD+SDEDMF+SI + SLP+APEIFACTVG+KPSKARYYLDD DVL LLKGLA
Sbjct: 781 CVGDDKSDEDMFQSILTSVSNPSLPVAPEIFACTVGRKPSKARYYLDDTADVLKLLKGLA 840
Query: 829 AAS 831
A+
Sbjct: 841 TAT 843
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|55792822|gb|AAV65494.1| trehalose 6-phosphate synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1293 bits (3345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/843 (72%), Positives = 711/843 (84%), Gaps = 12/843 (1%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M SRSC N + LAS +++ PQTPR LPR MTV G+I + D SND +SD S ++
Sbjct: 1 MASRSCANFLHLASGNLLDIPQTPRGLPRVMTVPGIISDMDSCSSNDGDSDVASSGCRER 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVAN LPLHA+++ E+ W FS+D+DSLLL +KD FS + +V YVGSLKVD+D +EQE
Sbjct: 61 KIIVANMLPLHAKRDRETSKWRFSWDEDSLLLHLKDEFSPEMEVVYVGSLKVDIDVNEQE 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EVAQKLL++FNCVPTF+ DLQKKFY GFCKQ+LWPLFHYMLP+CPD+G RFDR+LW+AY
Sbjct: 121 EVAQKLLEDFNCVPTFVPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRILWQAY 180
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+FADK+MEVINP++DYVWIHDYHLMVLPTFLR+ +R+KLGFFLHSP+PSSEIYR
Sbjct: 181 VSANKIFADKVMEVINPDDDYVWIHDYHLMVLPTFLRKHLNRIKLGFFLHSPYPSSEIYR 240
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EIL+ LLN DLIGFHTFDYARHFLSCCSRMLGLDYESKRG+IGL+YFGRT+++K
Sbjct: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIK 300
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VG+HMGRLES LN S++ +VKEI++QF+GKK+I+G+DDMDIFKGISLKLLA+EQLL
Sbjct: 301 ILPVGVHMGRLESVLNLSSTAARVKEIQKQFEGKKLILGIDDMDIFKGISLKLLAVEQLL 360
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ HP+LQGK+VLVQIVNPAR GKDVQ+AK ETY K+INE YG P Y+PVILIDRPVP
Sbjct: 361 QQHPDLQGKIVLVQIVNPARGFGKDVQEAKKETYMTAKKINEVYGSPNYQPVILIDRPVP 420
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+EK+AYYALAECCIVNAVRDGMNL+PYKY CRQGTP MDEA+ + PRTSMLV+SE
Sbjct: 421 RYEKSAYYALAECCIVNAVRDGMNLVPYKYIACRQGTPGMDEALGVKPEYPRTSMLVVSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
IGCSPSLSGAIRVNPWDIDAVA+AL+ AIT + EKQLRHEKHYRY+ +HDVAYWA SF
Sbjct: 481 LIGCSPSLSGAIRVNPWDIDAVAEALNTAITKPESEKQLRHEKHYRYVSTHDVAYWARSF 540
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
+ DL+RAC+DHYSKRCWGIG GLS L++D I AY+RT+RRAIFLDYDG
Sbjct: 541 VMDLDRACQDHYSKRCWGIGLGLSFRVVSLSPSFRRLAIDHICSAYRRTNRRAIFLDYDG 600
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T+VP ++IK PS +VI +++ LC D NT FIVSGRG+ SL +WLAPCE LGIAAEHGY
Sbjct: 601 TLVPEASIIKTPSPEVICIIKTLCDDPKNTVFIVSGRGRASLSDWLAPCEKLGIAAEHGY 660
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW+K SEWETS V AD EWK+I EPVM LY EATDGS IE KE LVWH+ DA P FG
Sbjct: 661 FIRWSKDSEWETSPVGADLEWKKIVEPVMSLYREATDGSSIETKEGGLVWHHLDADPDFG 720
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKELLDHLESVLANEP VV RG +IVEVKPQGV+KGLVAEKVLS M++ GK PDFV+
Sbjct: 721 SCQAKELLDHLESVLANEPAVVHRGQHIVEVKPQGVSKGLVAEKVLSRMVNGGKPPDFVM 780
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828
CVGDD+SDEDMF+SI + SLP+APEIFACTVG+KPSKARYYLDD DVL LLKGLA
Sbjct: 781 CVGDDKSDEDMFQSILTSVSNPSLPVAPEIFACTVGRKPSKARYYLDDTADVLKLLKGLA 840
Query: 829 AAS 831
A+
Sbjct: 841 TAT 843
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 832 | ||||||
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.985 | 0.945 | 0.693 | 0.0 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.985 | 0.952 | 0.683 | 0.0 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.979 | 0.952 | 0.679 | 0.0 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.978 | 0.946 | 0.621 | 1.1e-286 | |
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.983 | 0.948 | 0.618 | 1.1e-286 | |
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.978 | 0.956 | 0.605 | 3.6e-279 | |
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.913 | 0.881 | 0.634 | 1e-274 | |
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.836 | 0.738 | 0.336 | 6.4e-108 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.828 | 0.866 | 0.329 | 1.2e-104 | |
| ASPGD|ASPL0000037859 | 908 | orlA [Emericella nidulans (tax | 0.403 | 0.370 | 0.347 | 5e-102 |
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3154 (1115.3 bits), Expect = 0., P = 0.
Identities = 577/832 (69%), Positives = 691/832 (83%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPXXXXXXXXXXXXXXPSYRHHKK 60
M+SRSC N +DLAS D++ FPQT RALPR MTV G+I S ++
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRER 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVAN LPL A+++ E+G WCFS+D+DSLLLQ++DGFSSDT+ Y+GSL D+ SEQE
Sbjct: 61 KIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQE 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EV+ KLL +FNCVPTFL ++Q+KFY GFCK +LWPLFHYMLP+ PD+G RFDR LW+AY
Sbjct: 121 EVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAY 180
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+F+D++MEVINPEEDYVWIHDYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+++L+ LLN DLIGFHTFDYARHFLSCCSRMLGLDYESKRG+IGL+YFGRT+++K
Sbjct: 241 TLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIK 300
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VGIHMGRLES LN PS++ K+KEI+EQFKGKK+I+GVDDMDIFKGISLKL+AME+L
Sbjct: 301 ILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLF 360
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ + ++GKLVL+QIVNPAR+TGKDV++AK ETY+ KRINE YG GY+PVILIDR VP
Sbjct: 361 ETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVP 420
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+EKTAYYA+A+CC+VNAVRDGMNL+PYKY ICRQGTP MD+AM ++ RTSMLV+SE
Sbjct: 421 RYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A++ A+TM + EK+LRHEKHY Y+ +HDV YWA SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSF 540
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
MQDLERACR+HY+KRCWGIGFGLS LS+D IV Y+ T RRAIFLDYDG
Sbjct: 541 MQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDG 600
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T+VP ++IK P+ +V+ VL+ LCGD NT F+VSGRG SL +WL+PCENLGIAAEHGY
Sbjct: 601 TLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGY 660
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW+ K EWET +A+ EWK + EPVM+ Y +ATDGS IE KE+ALVWH+QDA P FG
Sbjct: 661 FIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFG 720
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
+CQAKELLDHLESVLANEPVVVKRG +IVEVKPQGV+KGL EKV+ M+ DG PD V+
Sbjct: 721 ACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMVM 780
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDV 820
C+GDDRSDEDMFESI LP+ PEIFACTVG+KPSKA+Y+LDD DV
Sbjct: 781 CIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDV 832
|
|
| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3087 (1091.7 bits), Expect = 0., P = 0.
Identities = 569/832 (68%), Positives = 680/832 (81%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPXXXXXXXXXXXXXXPSYRHHKK 60
M S+S NL+DLAS D++ PQTPR LPR MTV G+I S ++
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRER 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVANFLPL+ +K+ E+G W FS D+DS LL +KDGFS +T+V YVGSLK VD SEQ+
Sbjct: 61 KIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQD 120
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EV+ L +EFNCV TFL D+ KKFY GFCKQ LWPLFHYMLP+CPD+G RFDR LW+AY
Sbjct: 121 EVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAY 180
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+FADK+M VIN EEDY+WIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR E+L+ LLN DLIGFHTFDYARHFLSCC RMLGL+YESKRG+I L+Y GRT+++K
Sbjct: 241 TLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLK 300
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL +GIHMGRLES LN P+++ K+KEI+E+++GKK+I+GVDDMDIFKG+SLK+LA E LL
Sbjct: 301 ILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLL 360
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ +P + GK+VL+QIVNPAR +GKDVQ+A+ ETY KRINE YG YEPV+LIDRPVP
Sbjct: 361 QQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVP 420
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
EK+AYYALAECCIVNAVRDGMNL+PYKYT+CRQGTP M++++ ++ PRTS LV+SE
Sbjct: 421 RFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWD+DAVAD+L+ AITMSD EKQLRH+KH+ YI +HDV YWA SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSF 540
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
QDLERA RDHYSKRCWG+G+GL LS+++ V AY+R+S+RAIFLDYDG
Sbjct: 541 SQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDG 600
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T+VP +++K PS +VI L+ LC D NNT FIVSGRGKVSL EWLAPCENLGIAAEHGY
Sbjct: 601 TLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGY 660
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
+ RW K S+WETS ++ D EWK++ EP+M+LYTE TDGS IE KE+ALVWH+QDA P FG
Sbjct: 661 FTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFG 720
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKELLDHLE+VL NEPV+V RG+ IVEVKPQGV+KGLV K+LS M+ DG PDFV+
Sbjct: 721 SCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFVV 780
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDV 820
C+GDDRSDE+MFE+IS S ++ EIFACTVG+KPSKA+Y+LD+ DV
Sbjct: 781 CIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDV 832
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3068 (1085.0 bits), Expect = 0., P = 0.
Identities = 565/832 (67%), Positives = 682/832 (81%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPXXXXXXXXXXXXXXPSYRHHKK 60
M+SRSC N +DL+S D++ FPQTPR LPR MTV G+I R ++
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTSTSGGSR--ER 58
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
KIIVAN LPL ++++ E+G WCF++D+DSL LQ++DGFSS+T+ YVGSL VD++T+EQE
Sbjct: 59 KIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQE 118
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
EV+QKLL+EFNCV TFLS +LQ+ FY GFCK LWPLFHYMLP+ PD+G RFDR LW+AY
Sbjct: 119 EVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAY 178
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
VSANK+F+D++MEVINPE+DYVWI DYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIYR
Sbjct: 179 VSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 238
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
TLPVR+EIL+ LLN DLIGFHTFDYARHFLSCCSRMLGLDYESKRG+IGL+YFGRT+Y+K
Sbjct: 239 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 298
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
IL VG+HMGRLES L+ S++ K KEI+EQFKGKK+++G+DDMDIFKGISLKL+AME L
Sbjct: 299 ILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLF 358
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ + L+GK+VLVQIVNPARS+GKDV++AK ETY +RINE YG Y+P++LIDR VP
Sbjct: 359 ETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVP 418
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
EKTAYYA A+CC+VNAVRDGMNL+PYKY +CRQGT + ++A+ +S PRTS LV+SE
Sbjct: 419 RSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGT-RSNKAVVDSS--PRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A++ A+ MS+ EKQLRHEKHY YI +HDV YWA SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 MQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDG 588
MQDLERACRDHYSKRCWGIGFGL LSV+ IV Y++T RRAIFLDYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T+VP ++++ PS +V+ VL+ LC D NNT FIVSGRG+ SL WL+PCENLGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
++RW K EWET D EW+ + EPVM+ Y EATDG+ IE KE+ALVWH+QDA P FG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
SCQAKE+LDHLESVLANEPVVVKRG +IVEVKPQGV+KGL AEKV+ M+ G+ P+ V+
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVM 775
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDV 820
C+GDDRSDEDMFESI L + PE+FACTVG+KPSKA+Y+LDDE DV
Sbjct: 776 CIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADV 827
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2754 (974.5 bits), Expect = 1.1e-286, P = 1.1e-286
Identities = 528/849 (62%), Positives = 646/849 (76%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPXXXXXXXXXXXXXXPSYRHHKK 60
M+SRS NL++LAS D F + R +PR M V G++ P R
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIM--SNIDNDSKDTDLSPKDRI--- 55
Query: 61 KIIVANFLPLHAQKNLE---SGN----------WCFSFDDDSLLLQMKDGFSSDT-DVFY 106
IIVAN LP+ AQ+ ++ SG+ W FS+D++SLLLQ+KDG + +V Y
Sbjct: 56 -IIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIY 114
Query: 107 VGSLKVDVDTSEQEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICP 166
VG LK ++ +EQEEV Q LL+ F CVPTFL DL ++YHGFCKQ LWPLFHYMLP+ P
Sbjct: 115 VGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSP 174
Query: 167 DYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLG 226
D G RFDR LW+AYVS NK+FAD+IMEVINPE+D+VWIHDYHLMVLPTFLR+RF+RVKLG
Sbjct: 175 DLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 234
Query: 227 FFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRG 286
FFLHSPFPSSEIY+TLP+R E+L+ALLN+DLIGFHTFDYARHFLSCCSRMLGL YESKRG
Sbjct: 235 FFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG 294
Query: 287 YIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKVIVGVDDMD 344
YIGLEY+GRT+ +KIL VGIHMG+L+S L+ P + KV E+ E++ KG+ +++GVDDMD
Sbjct: 295 YIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMD 354
Query: 345 IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETY 404
IFKGI+LKLLAMEQLL HPE QGK+VLVQI NPAR GKDV++ + ETY+ KRINET+
Sbjct: 355 IFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETF 414
Query: 405 GVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAM 464
G PGY+P++LID P+ +E+ AYY +AECC+V AVRDGMNL+PY+Y + RQG K+D+ +
Sbjct: 415 GRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKIL 474
Query: 465 EL-ASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEK 523
+L A+ + SMLV+SEFIGCSPSLSGAIRVNPW++DAVADA+ A+ +++ EKQLRHEK
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEK 534
Query: 524 HYRYICSHDVAYWAHSFMQDLERACRDHYSKRCWGIGFGLS------------LSVDRIV 571
HY+Y+ +HDV YWA SF+QDLER+C +H +RCWGIGFGLS LS++ IV
Sbjct: 535 HYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIV 594
Query: 572 DAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLG 631
AYKRT RAI LDYD T++P ++ K+PS I +L LC D N FIVS + + +L
Sbjct: 595 SAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLS 654
Query: 632 EWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEK 691
+W +PCE LGIAAEHGY+LR K EWE A D WK+I EPVM+LYTE TDGS IE
Sbjct: 655 DWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIED 714
Query: 692 KETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAE 751
KETALVW Y+DA P FGSCQAKELLDHLESVLANEPV VKRG N VEVKPQGV+KGL+A
Sbjct: 715 KETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIAR 774
Query: 752 KVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKAR 811
++LS M G LP+FVLC+GDDRSDEDMFE I +T G S+ EIFACTVGQKPSKA+
Sbjct: 775 RMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAK 834
Query: 812 YYLDDEEDV 820
YYLDD ++
Sbjct: 835 YYLDDTTEI 843
|
|
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2754 (974.5 bits), Expect = 1.1e-286, P = 1.1e-286
Identities = 516/834 (61%), Positives = 641/834 (76%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPXXXXXXXXXXX-XXXPSYRHHK 59
M+SRS NL+DLAS + F + + PR TV GV+ PS
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQD 60
Query: 60 KKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQ 119
+ IIV N LP+ + +N +G FS+D+DSLLLQ+KDG D +V Y+G LK +DT EQ
Sbjct: 61 RIIIVGNQLPIKSHRN-SAGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQ 119
Query: 120 EEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRA 179
++V+Q+LL+ F CVP ++ +L K+YHGFCKQ+LWPLFHYMLP+ PD G RFDR LW+A
Sbjct: 120 DDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQA 179
Query: 180 YVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIY 239
Y+S NK+FADK+MEVI+P++D+VW+HDYHLMVLPTFLR+RF+RVKLGFFLHSPFPSSEIY
Sbjct: 180 YLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 239
Query: 240 RTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYV 299
RTLPVRNE+L+ALLNADLIGFHTFDYARHFLSCCSRMLGL Y+SKRG IGLEY+GRT+ +
Sbjct: 240 RTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSI 299
Query: 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQL 359
KIL VGIH+ +L+S LN P + KV E+R+QF +KV++GVDDMDIFKGISLKLLAMEQL
Sbjct: 300 KILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQL 359
Query: 360 LKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419
L HPE +G++VLVQI NPAR GKDVQ+ + ET KRINE +G PGY+PV+LID P+
Sbjct: 360 LTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPL 419
Query: 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS 479
E+ AYY +AECC+V AVRDGMNL+PY+Y ICRQG PK++E + L + SMLV+S
Sbjct: 420 QFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVVS 479
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHS 539
EFIGCSPSLSGAIRVNPW+IDAV +A+ A+ +S+ EKQ+RHEKH++Y+ +HDVAYWA S
Sbjct: 480 EFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARS 539
Query: 540 FMQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYD 587
F+QDLERAC DH KRCWGIGFGL LS++ IV AYKRT RAI LDYD
Sbjct: 540 FIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYD 599
Query: 588 GTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHG 647
GT+V ++ P+R+ I +L L D N ++VSG+ + +L EW + C++LG+ AEHG
Sbjct: 600 GTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHG 659
Query: 648 YYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGF 707
Y++R ++WETS++ + FEWK+I EPVM+LYTE TDGS IE KETALVW+YQ A P F
Sbjct: 660 YFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDF 719
Query: 708 GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFV 767
GSCQAKEL++HLESVL N+PV VK G +VEVKPQGV KGLVAE++L+TM GKL DF+
Sbjct: 720 GSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDFI 779
Query: 768 LCVGDDRSDEDMFESISQATYGSSL-PIAPEIFACTVGQKPSKARYYLDDEEDV 820
LCVGDDRSDEDMFE I A G +L P+A EIFACTVGQKPSKA+YYLDD ++
Sbjct: 780 LCVGDDRSDEDMFEVIMSAKDGPALSPVA-EIFACTVGQKPSKAKYYLDDTAEI 832
|
|
| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2683 (949.5 bits), Expect = 3.6e-279, P = 3.6e-279
Identities = 504/832 (60%), Positives = 628/832 (75%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPXXXXXXXXXXXXXXPSYRHHKK 60
M+SRS NL+DLAS + + R LPR MTV G + PS +
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDR 60
Query: 61 KIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQE 120
IIVAN LPL A+K +G+W FS+D DSL LQ+KDG D ++ YVGSL VDVD++EQ+
Sbjct: 61 MIIVANRLPLKAEKR--NGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQD 118
Query: 121 EVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAY 180
+VAQ LLD+F CVPTF DLQ KFY GFCK+ +WPLFHYMLP D+G RFDR LW AY
Sbjct: 119 DVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAY 178
Query: 181 VSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
V+ NK+F K++EVINP++D+VWIHDYHLMVLPTFLRRRF+R+++GFFLHSPFPSSEIYR
Sbjct: 179 VATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYR 238
Query: 241 TLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVK 300
+LPVR EILKALLN+DLIGFHTFDYARHFL+CCSRMLGL+Y+SKRGYIGLEY+GRT+ +K
Sbjct: 239 SLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIK 298
Query: 301 ILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLL 360
I+ VGI+MGR++S + + KV E+R +F+GK V++G+DDMDIFKGI+LKLLAMEQ+L
Sbjct: 299 IMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQML 358
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ HP +G+ VLVQIVNPAR G DV++ + E +RIN +G PGY+P+I ID PV
Sbjct: 359 RQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVS 418
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
++E AYY +AEC +V AVRDGMNL PY+Y +CRQG + + + P+ SMLV SE
Sbjct: 419 INEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGL--LGSESDFSG--PKKSMLVASE 474
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
FIGCSPSLSGAIRVNPW+++A +AL++A++MSD EKQLRHEKH+RY+ +HDVAYW+ SF
Sbjct: 475 FIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRSF 534
Query: 541 MQDLERACRDHYSKRCWGIG--FGL----------SLSVDRIVDAYKRTSRRAIFLDYDG 588
+QDLER C DH+ KRCWG+G FG LS+ IV YKR RAI LDYDG
Sbjct: 535 LQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYDG 594
Query: 589 TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648
T++P +++ K PS++V+ L LC D N+ FIVSGRG+ SL +W PC+ +GIAAEHGY
Sbjct: 595 TLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHGY 654
Query: 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFG 708
+L+W+ EWET ++DF W +I EPVMK YTE+TDGS IE KE+ALVW Y+DA PGFG
Sbjct: 655 FLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFG 714
Query: 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVL 768
S QAKE+L+HLESVLANEPV VK G+ IVEVKPQGV+KG V+EK+ S+M GK DFVL
Sbjct: 715 SLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDFVL 774
Query: 769 CVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDV 820
C+GDDRSDEDMFE+I A L +FACTVGQKPSKA+YYLDD +V
Sbjct: 775 CIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEV 826
|
|
| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2641 (934.7 bits), Expect = 1.0e-274, P = 1.0e-274
Identities = 492/775 (63%), Positives = 604/775 (77%)
Query: 60 KKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQ 119
K+I+V+N LPL A +++ S WCF FD+DSL LQ+KDGF +T+V YVGSL DV SEQ
Sbjct: 51 KRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQ 110
Query: 120 EEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRA 179
E+V+Q LL++F CVPTFL SDL K+YHGFCK YLWP+FHY+LP+ G FDR WRA
Sbjct: 111 EDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRA 170
Query: 180 YVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIY 239
Y + NK+FADKI EV+NP++DYVWIHDYHLM+LPTFLR RFHR+KLG FLHSPFPSSEIY
Sbjct: 171 YTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIY 230
Query: 240 RTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYV 299
RTLPVR+EILK LN DL+GFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRT+ +
Sbjct: 231 RTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSI 290
Query: 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQL 359
KIL VGIHMG++ES ++ KVK +RE+FKG V++GVDD+D+FKGISLK AM QL
Sbjct: 291 KILPVGIHMGQIESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQL 350
Query: 360 LKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG-YEPVILIDRP 418
L+ + EL+GK+VLVQI NPARS+GKDVQD + + I IN +G PG Y+P++ I+ P
Sbjct: 351 LEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGP 410
Query: 419 VPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVI 478
V +K AYYA++EC +VNAVRDGMNL+PYKYT+ RQG+P +D A+ R S++++
Sbjct: 411 VSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDVRKSVIIV 470
Query: 479 SEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538
SEFIGCSPSLSGAIRVNPW+IDAV +A+ A+TMSD EK LRH+KH++YI SH+VAYWA
Sbjct: 471 SEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWAR 530
Query: 539 SFMQDLERACRDHYSKRCWGIGFGLSLSV------------DRIVDAYKRTSRRAIFLDY 586
S+ QDL+RAC+DHY+KR WG+GFGL V + IV AY+R+S R I LDY
Sbjct: 531 SYDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDY 590
Query: 587 DGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEH 646
DGT++ L K+PS D+I +L LC D +N FIVSGRGK L +W C NLGI+AEH
Sbjct: 591 DGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEH 650
Query: 647 GYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPG 706
GY+ RW S WETS + AD WK+I +PVM Y EATDGS+IE+KE+A+VWH+Q+A
Sbjct: 651 GYFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHS 710
Query: 707 FGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISD-GKLPD 765
FGS QAKELLDHLESVL NEPVVVKRG +IVEVKPQGV+KG V E +++TM + GK PD
Sbjct: 711 FGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPD 770
Query: 766 FVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDV 820
F+LC+GDDRSDEDMF+SI + SS+ + E+FACTVGQKPSKA+YYLDD V
Sbjct: 771 FLLCIGDDRSDEDMFDSIVKHQDVSSIGLE-EVFACTVGQKPSKAKYYLDDTPSV 824
|
|
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1033 (368.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 250/744 (33%), Positives = 408/744 (54%)
Query: 57 HHKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDT 116
+ ++ ++VAN LP+ A + E +W L+ + G + + ++G V+V
Sbjct: 90 NRQRLLVVANRLPVSAVRRGED-SWSLEISAGGLVSALL-GVK-EFEARWIGWAGVNVPD 146
Query: 117 SEQEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYM-LPICPDYGF-RFDR 174
++ K L E C+P FL ++ ++Y+G+C LWPLFHY+ LP R +
Sbjct: 147 EVGQKALSKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ 206
Query: 175 LLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFP 234
+ AY AN++FAD + E E D VW HDYHLM LP L+ ++K+G+FLH+PFP
Sbjct: 207 SQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFP 265
Query: 235 SSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFG 294
SSEI+RTLP R+E+L+++L ADL+GFHT+DYARHF+S C+R+LGL+ + G+E G
Sbjct: 266 SSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQG 321
Query: 295 RTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLL 354
R V +GI R AL P +KE++E+F G+KV++GVD +D+ KGI K+L
Sbjct: 322 RLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQKIL 381
Query: 355 AMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVIL 414
A E+ L+ + + K+VL+QI P R+ + Q + + I RIN +G P+
Sbjct: 382 AFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHH 441
Query: 415 IDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTS 474
+DR + H A YA+ + +V ++RDGMNL+ Y++ C++ +
Sbjct: 442 LDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEA---------------KKG 486
Query: 475 MLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDV 533
+L++SEF G + SL +GAI VNPW+I VA ++ A+ M+ E++ RH ++ ++ +H
Sbjct: 487 VLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTHTA 546
Query: 534 AYWAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTV--- 590
WA +F+ +L + R + L + Y +++ R + L ++ T+
Sbjct: 547 QEWAETFVSELNDTVIEA-QLRISKVP--PELPQHDAIQRYSKSNNRLLILGFNATLTEP 603
Query: 591 VPHHAL----IKKPSR----DVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGI 642
V + IK+ ++ L+ LC D + T ++SG + L + + + +
Sbjct: 604 VDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFGEYD-MWL 662
Query: 643 AAEHGYYLRWTKKSEWETSTVA-ADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQ 701
AAE+G +LR T EW T+ + EW + V K +TE T S+ E ++T+L+W+Y+
Sbjct: 663 AAENGMFLRLTN-GEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSLIWNYK 721
Query: 702 DAAPGFGSCQAKELLDHL-ESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISD 760
A FG QA++LL HL ++N V V +G VEV+ GVTKG +++L ++
Sbjct: 722 YADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHS 781
Query: 761 GKL--P-DFVLCVGDDRS-DEDMF 780
+ P D+VLC+G DED++
Sbjct: 782 KSMTTPIDYVLCIGHFLGKDEDVY 805
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 992 (354.3 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 246/747 (32%), Positives = 409/747 (54%)
Query: 62 IIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEE 121
++V+ LP+ A++ E +W F+ L+ + G + + ++G VDV + ++
Sbjct: 7 LVVSMSLPVTAKRTGEE-SWSFTMSPGGLVSALL-GLK-EFETKWIGWPGVDVHDAIGKK 63
Query: 122 VAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLL----- 176
L E C+P FL ++ ++Y+G+C LWP+FHY L P+Y R D +
Sbjct: 64 TLSITLAEKGCIPVFLE-EVCDQYYNGYCNNILWPIFHY-LGTPPEY--RNDATITYQSQ 119
Query: 177 WRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS 236
+ AY AN++F D + E E D VW HDYH+M+LP +L+ ++K+G+FLH+PFPSS
Sbjct: 120 YEAYKKANQIFFDVVKEHYE-EGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSS 178
Query: 237 EIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRT 296
E+Y+TLP R+++L+++L ADL+GFHT+D+ARHFL+ C +LG++ S+ G+ G+
Sbjct: 179 EMYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSE----GIVDQGKV 234
Query: 297 IYVKILHVGIHMGRLESALNHPSSSIK-VKEIREQFKGKKVIVGVDDMDIFKGISLKLLA 355
V + +GI R + + S ++ +K+ + F G+K+I+GVD +D KGI K A
Sbjct: 235 TRVAVFPIGIEPERFINT-SELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQA 293
Query: 356 MEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILI 415
E+ L+ + E +GK++L+QI P R+ + Q K + + RIN +G P+I +
Sbjct: 294 FEKFLEENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHL 353
Query: 416 DRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSM 475
D + ++ A YA+ + +V ++RDGMNL+ ++ C++ +
Sbjct: 354 DCSIDFNQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKA---------------EKGV 398
Query: 476 LVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVA 534
L++SEF G SL +GAI VNPW+I V+ A+ +A+ MS EK+ +H+ +++Y+ +H
Sbjct: 399 LILSEFAGAGQSLGAGAILVNPWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQ 458
Query: 535 YWAHSFMQ-DLERA-CR---DHYSKRCWGIGFGLSLSVDR--IVDAYKRTSRRAIFLDYD 587
WA FM+ L C + + G G +L + ++ Y +++ R + L +
Sbjct: 459 QWADDFMKLTLTNILCSKLIEITTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFY 518
Query: 588 GTVV-PHHALIKKPSRDVIYV-------LRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
GT+ P ++ + + L+ELC D T ++S K L + N
Sbjct: 519 GTLTQPMKNQERRGDGMNLELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEY-N 577
Query: 640 LGIAAEHGYYLRWTKKSEWETSTVA-ADFEWKRITEPVMKLYTEATDGSYIEKKETALVW 698
+ +AAE+G +LR T EW T + EW + V K +TE T GSY+E E +LVW
Sbjct: 578 MWLAAENGMFLRHTS-GEWVTRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVW 636
Query: 699 HYQDAAPGFGSCQAKELLDHL-ESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTM 757
+Y++A FG QA+++L HL ++N V V RG VEV GVTKG E++L +
Sbjct: 637 NYENADAEFGRAQARDMLQHLWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEI 696
Query: 758 ISDGKL--P-DFVLCVGDDRS-DEDMF 780
+ + + P D+VLC+G DED++
Sbjct: 697 VHNKSMATPIDYVLCIGCFLGKDEDVY 723
|
|
| ASPGD|ASPL0000037859 orlA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 541 (195.5 bits), Expect = 5.0e-102, Sum P(2) = 5.0e-102
Identities = 122/351 (34%), Positives = 199/351 (56%)
Query: 110 LKVDVDTSEQEEVAQKLLDEFNCVP--TFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPD 167
L+ + +S +V L + + VP T + D + + + ++ L+ L HY P
Sbjct: 208 LEDQLSSSRHGKVVPVWLSDESDVPEDTIILGDQSR--WRRYAEKELYALLHYKQN-GPT 264
Query: 168 YGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGF 227
G RF+R W YV N++FA++I++ E D VWIHDYHL +LP+ LR+ + +GF
Sbjct: 265 DG-RFERDSWTDYVRMNQLFAERILQEYK-EGDIVWIHDYHLFLLPSILRQHVPNIYIGF 322
Query: 228 FLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGY 287
+LHSPFPSSE R L R EIL +L A++IGF TF Y+RHF SCC+R+LG + +S
Sbjct: 323 YLHSPFPSSEYMRCLAKRKEILTGVLGANMIGFQTFSYSRHFSSCCTRVLGFESDSA--- 379
Query: 288 IGLEYFGRTIYVKILHVGIHMGRLES-ALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIF 346
G++ +G + V + +GI ++ A + + V+ +R+ + GKK+IVG D +D
Sbjct: 380 -GVDAYGAHVAVDVFPIGIDAEAIQKIAFENADTEKAVEGLRQLYAGKKIIVGRDRLDSA 438
Query: 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETY--TITKRINETY 404
+G++ KL A E L+ PE + K+VL+Q+ +P S ++ ++ K+ + + IN +
Sbjct: 439 RGVAQKLQAFETFLERFPEWRDKVVLIQVTSPT-SVEEEKEEQKIASRISNLVSTINGRF 497
Query: 405 GVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455
G + PV + + HE A +A+ ++ VRDGMN +Y +C+Q
Sbjct: 498 GSLSFSPVKYYPQYLSPHEYFALLRVADVGLITTVRDGMNTTSLEYILCQQ 548
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3420 | 0.8533 | 0.9686 | yes | no |
| Q9LRA7 | TPS9_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.6986 | 0.9987 | 0.9584 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00016126001 | SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (862 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00006682001 | SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (565 aa) | • | • | 0.916 | |||||||
| GSVIVG00034877001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (465 aa) | • | • | 0.914 | |||||||
| GSVIVG00027920001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (927 aa) | • | • | • | • | 0.908 | |||||
| GSVIVG00035830001 | SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (828 aa) | • | • | • | • | 0.902 | |||||
| GSVIVG00038825001 | SubName- Full=Chromosome chr5 scaffold_98, whole genome shotgun sequence; (1031 aa) | • | 0.899 | ||||||||
| GSVIVG00038290001 | SubName- Full=Chromosome undetermined scaffold_92, whole genome shotgun sequence; (196 aa) | • | 0.899 | ||||||||
| GSVIVG00036138001 | SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (281 aa) | • | 0.899 | ||||||||
| GSVIVG00033041001 | SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (808 aa) | • | 0.899 | ||||||||
| GSVIVG00030060001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (459 aa) | • | 0.899 | ||||||||
| GSVIVG00028036001 | SubName- Full=Putative uncharacterized protein (Chromosome chr7 scaffold_42, whole genome shotg [...] (811 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 832 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-169 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-156 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-142 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-134 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 2e-83 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 3e-61 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 6e-59 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 2e-38 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 2e-23 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 3e-14 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 6e-09 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 1e-06 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 4e-06 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 3e-05 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 8e-04 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 8e-04 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 0.004 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1212 bits (3137), Expect = 0.0
Identities = 545/849 (64%), Positives = 664/849 (78%), Gaps = 17/849 (2%)
Query: 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSPSYRHHKK 60
M+SRS NL++LAS + F + R +PR MTV G++ + D + S SD S K
Sbjct: 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKD 60
Query: 61 K-IIVANFLPLHAQKNLE-SGNWCFSFDDDSLLLQMKDGFSSDT-DVFYVGSLKVDVDTS 117
+ IIVAN LP+ AQ+ + S W FS+D++SLLLQ+KDG D +V YVG LK ++ +
Sbjct: 61 RIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLN 120
Query: 118 EQEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLW 177
EQEEV+Q LL+ F CVPTFL DL ++YHGFCKQ LWPLFHYMLP+ PD G RF+R LW
Sbjct: 121 EQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
Query: 178 RAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSE 237
+AYVS NK+FAD+IMEVINPE+D+VWIHDYHLMVLPTFLR+RF+RVKLGFFLHSPFPSSE
Sbjct: 181 QAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
Query: 238 IYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTI 297
IY+TLP+R E+L+ALLN+DLIGFHTFDYARHFLSCCSRMLGL YESKRGYIGLEY+GRT+
Sbjct: 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTV 300
Query: 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKVIVGVDDMDIFKGISLKLLA 355
+KIL VGIHMG+L+S L+ P + KVKE+ +QF + + +++GVDDMDIFKGISLKLLA
Sbjct: 301 SIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLA 360
Query: 356 MEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILI 415
MEQLL HPE QGK+VLVQI NPAR GKDV++ + ET++ KRINET+G PGY+P++LI
Sbjct: 361 MEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLI 420
Query: 416 DRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSM 475
D P+ +E+ AYY +AECC+V AVRDGMNL+PY+Y I RQG K+D+ + L P+ SM
Sbjct: 421 DAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480
Query: 476 LVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAY 535
LV+SEFIGCSPSLSGAIRVNPW+IDAVADA+ A+ M++ EKQLRHEKHYRY+ +HDV Y
Sbjct: 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGY 540
Query: 536 WAHSFMQDLERACRDHYSKRCWGIGFGLS------------LSVDRIVDAYKRTSRRAIF 583
WA SF+QDLER CRDH +RCWGIGFGLS LS++ IV AYKRT+ RAI
Sbjct: 541 WARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAIL 600
Query: 584 LDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIA 643
LDYDGT++P ++ K PS I +L LC D NN FIVS R + +L +W +PCE LGIA
Sbjct: 601 LDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIA 660
Query: 644 AEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDA 703
AEHGY+LR + EWET AD WK+I EPVM+LYTE TDGS IE KETALVW Y+DA
Sbjct: 661 AEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720
Query: 704 APGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKL 763
P FGSCQAKELLDHLESVLANEPV VK G NIVEVKPQGV+KGLVA+++LS M G L
Sbjct: 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGML 780
Query: 764 PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLAL 823
PDFVLC+GDDRSDEDMFE I+ + G S+ E+FACTVGQKPSKA+YYLDD +++ L
Sbjct: 781 PDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRL 840
Query: 824 LKGLAAASK 832
++GLA+ S+
Sbjct: 841 MQGLASVSE 849
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 660 bits (1706), Expect = 0.0
Identities = 237/492 (48%), Positives = 317/492 (64%), Gaps = 26/492 (5%)
Query: 59 KKKIIVANFLPLHAQKNLESGNWCFSFDDDSL-LLQMKDGFSSDTDVFYVGSLKVDVDTS 117
+ ++V+N LP+ A K E G W FS S L+ +G S T+ +VG V VD
Sbjct: 1 SRLVVVSNRLPVTA-KREEEGKWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDED 59
Query: 118 E-QEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLL 176
E ++ V+Q L ++F CVP FL + ++Y+GF LWPLFHY LP P+ FDR
Sbjct: 60 EPKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLP--PNNEDEFDRSW 117
Query: 177 WRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS 236
W AYV NK+FADKI+EV D +W+HDYHLM+LP LR+R K+GFFLH PFPSS
Sbjct: 118 WDAYVKVNKLFADKIVEVYKDG-DLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 237 EIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRT 296
EI+R LPVR EIL+ LL ADLIGFHT+DYARHFLSCCSR+LGL+ S G+EY GRT
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDG---GVEYGGRT 233
Query: 297 IYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMDIFKGISLKLLA 355
+ V +GI GR+ES L PS KVKE++E+F KK+I+GVD +D KGI KLLA
Sbjct: 234 VSVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLA 293
Query: 356 MEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILI 415
E+ L+ +PE +GK+VLVQI P+R ++ Q+ + + + RIN +G Y PV +
Sbjct: 294 FERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHL 353
Query: 416 DRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSM 475
R + E A YA+A+ C+V ++RDGMNL+ Y+Y C+Q R +
Sbjct: 354 HRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQD---------------RKGV 398
Query: 476 LVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVA 534
L++SEF G + SL GAI VNPWDI+ VA+A+++A+TMS+ E+Q RH K ++YI HDV
Sbjct: 399 LILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQ 458
Query: 535 YWAHSFMQDLER 546
YWA SF+ DL+R
Sbjct: 459 YWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 615 bits (1588), Expect = 0.0
Identities = 266/776 (34%), Positives = 400/776 (51%), Gaps = 54/776 (6%)
Query: 59 KKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVG--SLKVDVDT 116
+ IIV+N LP+ E G + L ++ F +VG L ++ ++
Sbjct: 1 SRLIIVSNRLPVTVV--REDGGVELTPSVGGLATGLR-SFHERGGGLWVGWPGLDLEEES 57
Query: 117 SEQEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLL 176
EQ + L+E VP FLS++ ++Y GFC LWPLFHY F+
Sbjct: 58 EEQRARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE-----FEDRF 112
Query: 177 WRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS 236
W +Y N+ FA+ I + P D VW+HDY LM+LP LR R ++GFFLH PFPS
Sbjct: 113 WESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSF 171
Query: 237 EIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRT 296
E++R LP R EIL+ LL ADLIGFHT+DY RHFLS R+LG + E +G GR
Sbjct: 172 EVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLG----GRI 227
Query: 297 IYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAM 356
+ V +GI + ++ P +++ +R+ +G+K+I+ +D +D KGI +LLA
Sbjct: 228 VRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAF 287
Query: 357 EQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILID 416
E+ L+ +PE +GK+ LVQ+ P+R+ Q+ K E + RIN +G + P+
Sbjct: 288 ERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFY 347
Query: 417 RPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSML 476
R +P E A Y A+ +V +RDGMNL+ +Y R D +L
Sbjct: 348 RSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT-----DG----------DGVL 392
Query: 477 VISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYW 536
++SE G + L+ A+ VNP DI+ +A A+ A+ M + E++ R + + +DV W
Sbjct: 393 ILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKW 452
Query: 537 AHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPH--H 594
A F+ +L A + + I + + I+ Y+ SRR + LDYDGT+VP
Sbjct: 453 ASDFLDELREAAEKNKAFASKPIT---PAAAEEIIARYRAASRRLLLLDYDGTLVPFAPD 509
Query: 595 ALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTK 654
+ P +++ +LR L D N I+SGR + +L W + + AEHG + R
Sbjct: 510 PELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG 568
Query: 655 KSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKE 714
EW+ EWK P+++ + + T GS+IE+KE +L WHY++A P G +A E
Sbjct: 569 G-EWQ-LLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANE 626
Query: 715 LLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR 774
L+ L S+L+N P+ V RG +VEV+P GV KG ++L + DFVL +GDD
Sbjct: 627 LILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL-----EAGPYDFVLAIGDDT 681
Query: 775 SDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLAAA 830
+DEDMF +LP VG S+ARY L + +V LL+ L
Sbjct: 682 TDEDMFR---------ALP--ETAITVKVGPGESRARYRLPSQREVRELLRRLLDI 726
|
Length = 726 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 574 bits (1483), Expect = 0.0
Identities = 200/484 (41%), Positives = 279/484 (57%), Gaps = 26/484 (5%)
Query: 62 IIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEE 121
++V+N LP+ +++ + L G T +VG ++ D E++E
Sbjct: 3 VVVSNRLPVSIERD--GDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDE 60
Query: 122 VAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYV 181
V+ +LL E+ P FLS + + +Y+GF + LWPLFHY L RFDR W AYV
Sbjct: 61 VSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLD-----LARFDREDWEAYV 115
Query: 182 SANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT 241
N+ FAD I EV+ P D VW+HDYHL++LP LR R ++GFFLH PFPSSEI+R
Sbjct: 116 RVNRKFADAIAEVLRPG-DLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRC 174
Query: 242 LPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKI 301
LP R E+L+ LL ADLIGF T YAR+FLSCCSR+LGL+ G+EY GR + V
Sbjct: 175 LPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRVRVGA 231
Query: 302 LHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLK 361
+GI P + E+RE+ G+K+IVGVD +D KGI +LLA E+LL+
Sbjct: 232 FPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLE 291
Query: 362 VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPL 421
+PE +GK+VLVQI P+R+ + Q+ + E + RIN +G + PV + R +P
Sbjct: 292 RYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPR 351
Query: 422 HEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF 481
E A Y A+ +V +RDGMNL+ +Y C+ +L++SEF
Sbjct: 352 EELAALYRAADVALVTPLRDGMNLVAKEYVACQD---------------DDPGVLILSEF 396
Query: 482 IGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541
G + LSGA+ VNP+DID VADA+H A+TM E++ RH K Y+ +HDV WA+SF+
Sbjct: 397 AGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFL 456
Query: 542 QDLE 545
DL
Sbjct: 457 DDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 509 bits (1312), Expect = e-169
Identities = 283/814 (34%), Positives = 436/814 (53%), Gaps = 84/814 (10%)
Query: 62 IIVANFLPLHAQKNLESGNWCFSFDDD---SLLLQMKDGFSSDTDVFYVGSLKVDVDTSE 118
++VAN LP+ A K +W S LL + + + ++G VDV
Sbjct: 14 LVVANRLPVSA-KRTGEDSWSLEMSPGGLVSALLGV-----KEFETKWIGWPGVDVHDEI 67
Query: 119 QEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYM-LPICPDYGFRFDRLL- 176
+ + L E C+P FL+ ++ ++Y+G+C LWP+FHYM LP + R
Sbjct: 68 GKAALTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLP--QEDRHDATRTFE 124
Query: 177 --WRAYVSANKVFADKIMEVINPEE-DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPF 233
+ AY AN++F D + E N EE D VW HDYHLM LP +L+ +++K+G+FLH+PF
Sbjct: 125 SQYDAYKKANRMFLDVVKE--NYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPF 182
Query: 234 PSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYF 293
PSSEIY+TLP R+E+L+A+L ADLIGFHT+D+ARHFLS C+R+LG++ + G+
Sbjct: 183 PSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVDQ 238
Query: 294 GRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKL 353
G+ V + +GI R + P +KE++ F G+KVI+GVD +D+ KGI K
Sbjct: 239 GKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKY 298
Query: 354 LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVI 413
LA E+ L+ +PE + K++LVQI P R+ + Q K + + + RIN +G P+
Sbjct: 299 LAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIH 358
Query: 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRT 473
+D V + A YA+ + +V ++RDGMNL+ Y++ C++
Sbjct: 359 HLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK---------------K 403
Query: 474 SMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHD 532
+LV+SEF G SL +GA+ VNPW+I V+ A+ +A+ MSD E++ RH +++Y+ +H
Sbjct: 404 GVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHS 463
Query: 533 VAYWAHSFMQDLERACRDHYSKRCWGIG-FGLSLSVDRIVDAYKRTSRRAIFLDYDGTVV 591
WA FM +L D + L L ++ Y +++ R + L + GT+
Sbjct: 464 AQKWADDFMSELN----DIIVEAELRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLT 519
Query: 592 -PHHALIK----KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSL----GEWLAPCENLGI 642
P ++ IK ++ L+ LC D T ++S GK L GE+ N+ +
Sbjct: 520 EPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-----NIWL 574
Query: 643 AAEHGYYLRWTKKSEWETSTVA-ADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQ 701
AAE+G +LR T EW T+ + +W + V K +T+ T SY+EK ET+LVW+Y+
Sbjct: 575 AAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYE 633
Query: 702 DAAPGFGSCQAKELLDHL-ESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISD 760
A FG QA+++L HL ++N V V RG VEV GVTKG ++L ++ +
Sbjct: 634 YADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHN 693
Query: 761 GKLP---DFVLCVGDDRS-DEDMF-----ESISQATYGSS-------------LPIAPE- 797
+ DFV C G DED++ E +S+ SS + + E
Sbjct: 694 KSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGEN 753
Query: 798 IFACTVGQKPSKARYYLDDEEDVLALLKGLAAAS 831
F+C +GQ +KARY LD DV++LL LA A+
Sbjct: 754 YFSCAIGQARTKARYVLDSSNDVVSLLHKLAVAN 787
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 478 bits (1233), Expect = e-156
Identities = 263/782 (33%), Positives = 418/782 (53%), Gaps = 78/782 (9%)
Query: 34 QGVIPEADGNESNDENSDSPSYRHHKKKIIVANFLPLHAQKNLESGNWCFSFDDDSL--- 90
+G E+ + + R ++ ++VAN LP+ A + E +W L
Sbjct: 71 EGAAAESALPDGCERQEGRRPLR--QRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSA 127
Query: 91 LLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQ----KLLDEFNCVPTFLSSDLQKKFY 146
LL +K+ + ++G V+V +EV Q K L E C+P FL ++ ++Y
Sbjct: 128 LLGVKE-----FEARWIGWAGVNV----PDEVGQKALTKALAEKRCIPVFLDEEIVHQYY 178
Query: 147 HGFCKQYLWPLFHYMLPICPDYGFRF-DRLL--------WRAYVSANKVFADKIMEVINP 197
+G+C LWPLFHY+ G DRL + AY AN++FAD + E
Sbjct: 179 NGYCNNILWPLFHYL-------GLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYE- 230
Query: 198 EEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADL 257
E D VW HDYHLM LP L+ +K+G+FLH+PFPSSEI+RTLP R+E+L+++L ADL
Sbjct: 231 EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADL 290
Query: 258 IGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNH 317
+GFHT+DYARHF+S C+R+LGL+ + G+E GR V +GI R AL
Sbjct: 291 VGFHTYDYARHFVSACTRILGLEGTPE----GVEDQGRLTRVAAFPIGIDSDRFIRALET 346
Query: 318 PSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVN 377
P +KE++E+F G+KV++GVD +D+ KGI K+LA E+ L+ +PE + K+VL+QI
Sbjct: 347 PQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAV 406
Query: 378 PARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVN 437
P R+ + Q + + I RIN +G P+ +DR + H A YA+ + +V
Sbjct: 407 PTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVT 466
Query: 438 AVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNP 496
++RDGMNL+ Y++ C Q + K +L++SEF G + SL +GAI VNP
Sbjct: 467 SLRDGMNLVSYEFVAC-QDSKK--------------GVLILSEFAGAAQSLGAGAILVNP 511
Query: 497 WDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRDHYSKRC 556
W+I VA ++ A+ M + E++ RH ++ ++ +H WA +F+ +L + R
Sbjct: 512 WNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEA-QLRT 570
Query: 557 WGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVV-PHHALIKKPSR----------DVI 605
+ L + + Y +++ R + L ++ T+ P ++ + ++
Sbjct: 571 RQVPPQ--LPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELK 628
Query: 606 YVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVA- 664
LR LC D T ++SG + L E ++ +AAE+G +LR T K EW T+
Sbjct: 629 EPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHT-KGEWMTTMPEH 686
Query: 665 ADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHL-ESVL 723
+ +W + V + +TE T S+ E +ET+LVW+Y+ A FG QA+++L HL +
Sbjct: 687 LNMDWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPI 746
Query: 724 ANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLP---DFVLCVGDDRS-DEDM 779
+N V V +G VEV+P GVTKG +++L ++ + D+VLC+G DED+
Sbjct: 747 SNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDI 806
Query: 780 FE 781
+
Sbjct: 807 YT 808
|
Length = 934 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 427 bits (1101), Expect = e-142
Identities = 186/487 (38%), Positives = 271/487 (55%), Gaps = 25/487 (5%)
Query: 62 IIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEE 121
I+V+N LP+ + G L+ +K ++G T E +
Sbjct: 18 IVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALK-PLLRVDGGTWIGWSGTTGPTDESSD 76
Query: 122 VAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYV 181
++ + EF P LS + + +Y+GF LWPLFHY + ++R W AYV
Sbjct: 77 DLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYV 131
Query: 182 SANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT 241
N+ FADKI+E+ P D +W+HDYHL+++P LR R K+GFFLH PFPSSE++R
Sbjct: 132 KVNRKFADKIVEIYEPG-DIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRC 190
Query: 242 LPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKI 301
LP R EIL+ LL ADLIGF T YAR+FL CSR+LG+ ++ + G GR + V
Sbjct: 191 LPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNG--ADGRIVKVGA 248
Query: 302 LHVGIHMGRLESALNHPSSSIKVKEIREQFKG-KKVIVGVDDMDIFKGISLKLLAMEQLL 360
+GI E AL PS KV E++ + KK+IVGVD +D KGI +LLA E+LL
Sbjct: 249 FPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLL 308
Query: 361 KVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420
+ +PE +GK+VL+QI P+R ++ Q +L+ + RIN +G + PV + R +
Sbjct: 309 EEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLD 368
Query: 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480
+E A Y A+ +V +RDGMNL+ +Y ++ + +L++SE
Sbjct: 369 RNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRD---------------KPGVLILSE 413
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540
F G + L A+ VNPWD VADA+ A+TMS E++ RHEK + + +HDVA WA+SF
Sbjct: 414 FAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSF 473
Query: 541 MQDLERA 547
+ DL +A
Sbjct: 474 LDDLAQA 480
|
Length = 486 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 406 bits (1046), Expect = e-134
Identities = 173/451 (38%), Positives = 248/451 (54%), Gaps = 26/451 (5%)
Query: 97 GFSSDTDVFYVGSLKVDV-DTSEQEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLW 155
G T + G V + + + +L + P FLS + +Y+GF LW
Sbjct: 31 GALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLW 90
Query: 156 PLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTF 215
PLFHY PD R+DR W AY N++FA+ + ++ P D VW+HDYHLM+LP
Sbjct: 91 PLFHYR----PDL-IRYDRKAWEAYRRVNRLFAEALAPLLQPG-DIVWVHDYHLMLLPAM 144
Query: 216 LRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSR 275
LR + K+GFFLH PFPSSEIYRTLP R E+L+ LL DL+GF T+D AR+FLS SR
Sbjct: 145 LRELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSR 204
Query: 276 MLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKK 335
LGL+ G+E GRT+ V +GI + R PS ++ E+RE KG+K
Sbjct: 205 ELGLETLPN----GVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRK 260
Query: 336 VIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYT 395
+I+GVD +D KG+ +LLA E+ L+ HPE +GK+VLVQI P+R + Q + +
Sbjct: 261 LIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEE 320
Query: 396 ITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455
+ RIN +G + P+ ++R E A Y A+ +V +RDGMNL+ +Y +
Sbjct: 321 LVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD 380
Query: 456 GTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDV 515
P+ +L++SEF G + L+GA+ VNP+DID +ADA+ A+TM
Sbjct: 381 ---------------PKDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLE 425
Query: 516 EKQLRHEKHYRYICSHDVAYWAHSFMQDLER 546
E++ RH + +DV W F+ DL
Sbjct: 426 EREERHRAMMDKLRKNDVQRWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 266 bits (681), Expect = 2e-83
Identities = 109/243 (44%), Positives = 148/243 (60%), Gaps = 15/243 (6%)
Query: 583 FLDYDGTVVPHHALIKK------PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636
FLDYDGT+ P I + PS ++ +L L D NT I+SGR + +
Sbjct: 1 FLDYDGTLSP----IVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFE-DLFFG 55
Query: 637 CENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETAL 696
NLG+AAEHG ++R +W D +WK+ +++ YTE T GSYIE K++AL
Sbjct: 56 VPNLGLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSAL 115
Query: 697 VWHYQDAAPGFGSCQAKELLDHLESVLANEP-VVVKRGYNIVEVKPQGVTKGLVAEKVLS 755
WHY++A FG QAKEL +HLESVL + P V V +G +VEV+P GV+KG AE++L
Sbjct: 116 AWHYRNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAERLLE 175
Query: 756 TMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLD 815
+ S G PDF LC+GDDR+DEDMF+ ++ T S L I E+ A +VG KPS A+Y+LD
Sbjct: 176 ELGSAGSPPDFPLCIGDDRTDEDMFDVVNP-TKMSGLSI--EVGATSVGSKPSSAKYFLD 232
Query: 816 DEE 818
D
Sbjct: 233 DPS 235
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 214 bits (547), Expect = 3e-61
Identities = 122/422 (28%), Positives = 202/422 (47%), Gaps = 38/422 (9%)
Query: 137 LSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVIN 196
LS + FYH K+ WP+ H P+ F+F W+ ++ N+ FA+
Sbjct: 77 LSKEQVDIFYHITSKEAFWPILHTF----PER-FQFREDDWQVFLKVNRAFAEAACLEAA 131
Query: 197 PEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNAD 256
E VW+HDY+L ++P ++R+ +K+ FF H+PFPS++++ LP R +I+ +LL D
Sbjct: 132 -EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCD 190
Query: 257 LIGFHTFDYARHFLSCCSRMLGLDYESK-----------------RGYIGLEYFGRTIYV 299
IGFH Y +F+ ++ L S+ R L+ R + +
Sbjct: 191 YIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKL 250
Query: 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQL 359
VG R+ SAL S ++ IR + G K+I+ + +D KGI KL A E+L
Sbjct: 251 GAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERL 310
Query: 360 LKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419
L+ PEL GK+ LV PA S + + + RIN + G+ P+ R +
Sbjct: 311 LERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSL 370
Query: 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS 479
P E +A++A+A+ + +RDG+NL+ +Y + +LV+S
Sbjct: 371 PYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQG---------------LLDGVLVLS 415
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHS 539
EF G + L GA+ NP+D + + ++ A+ M E+Q R + + + +DV WA
Sbjct: 416 EFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADE 475
Query: 540 FM 541
F+
Sbjct: 476 FL 477
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 208 bits (530), Expect = 6e-59
Identities = 123/403 (30%), Positives = 206/403 (51%), Gaps = 26/403 (6%)
Query: 145 FYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWI 204
+Y+ F LWP FHY L + +F R W Y+ N + ADK++ ++ + D +WI
Sbjct: 76 YYNQFSNAVLWPAFHYRLDLV-----QFQRPAWEGYLRVNALLADKLLPLLKDD-DIIWI 129
Query: 205 HDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFD 264
HDYHL+ + LR+R ++GFFLH PFP+ EI+ LP +E+L+ L + DL+GF T +
Sbjct: 130 HDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTEN 189
Query: 265 YARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKV 324
FL C S + + S + + +G+ ++ +GI + P K+
Sbjct: 190 DRLAFLDCLSNLTRVTTRSGKSHTA---WGKAFRTEVYPIGIEPDEIAKQAAGPLPP-KL 245
Query: 325 KEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGK 384
+++ + K + I V+ +D KG+ + LA E LL+ +P+ GK+ QI +R +
Sbjct: 246 AQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQ 305
Query: 385 DVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMN 444
QD + + T RIN YG G+ P+ +++ + ++ +V +RDGMN
Sbjct: 306 AYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMN 365
Query: 445 LMPYKYTICRQGTPKMDEAMELASVCPRT-SMLVISEFIGCSPSLSGAIRVNPWDIDAVA 503
L+ +Y +A+ P +LV+S+F G + L+ A+ VNP+D D VA
Sbjct: 366 LVAKEY---------------VAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVA 410
Query: 504 DALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLER 546
AL A+TM E+ RH + I +D+ +W F+ DL++
Sbjct: 411 AALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQ 453
|
Length = 474 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 2e-38
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 19/259 (7%)
Query: 574 YKRTSRRAIFLDYDGTVVPH--HALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLG 631
Y +R +FLDYDGT+ H P ++ +L++L D N I+SGR L
Sbjct: 13 YLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELE 72
Query: 632 EWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEK 691
+G+ AEHG +R W AD W + +++ Y E T GSYIE+
Sbjct: 73 RLFGV-PGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIER 131
Query: 692 KETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAE 751
K A+ HY++A G+ A L + L + V G +VE++P GV+KG +
Sbjct: 132 KGFAVALHYRNAEDDEGAALALAEAATLINELK---LRVTPGKMVVELRPPGVSKGAAIK 188
Query: 752 KVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKAR 811
++ F + GDD +DED F ++++ + + VG ++A+
Sbjct: 189 YIMD---ELPFDGRFPIFAGDDLTDEDAFAAVNKLD-------SITV---KVGVGSTQAK 235
Query: 812 YYLDDEEDVLALLKGLAAA 830
+ L L L L A
Sbjct: 236 FRLAGVYGFLRSLYKLLEA 254
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 99 bits (249), Expect = 2e-23
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 579 RRAIFLDYDGT---VVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLA 635
+RA F DYDGT +VP R ++ +L++L +N +I+SGR +
Sbjct: 3 KRAFFFDYDGTLSEIVPDPDAAVVSDR-LLTILQKLAARPHNAIWIISGRKFLEKWL-GV 60
Query: 636 PCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETA 695
LG+A EHG ++ + + WK + + T G +IE+K A
Sbjct: 61 KLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITT-RPGVFIERKGVA 119
Query: 696 LVWHYQDAA-PGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVL 754
L WHY+ A P +AKEL E +L+ + V G +VE+KP+ V KG + +++L
Sbjct: 120 LAWHYRQAPVPELARFRAKELK---EKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRLL 176
Query: 755 STMISDGKLPDFVLCVGDDRSDEDMFESISQATY---GSSLPIAPEIFACTVGQKPSKAR 811
G P + +GDD +DED F ++ +PI G K + A+
Sbjct: 177 WHQPGSGISP---VYLGDDITDEDAFRVVNNQWGNYGFYPVPIGS-------GSKKTVAK 226
Query: 812 YYLDDEEDVLALLKGLA 828
++L + VL L L
Sbjct: 227 FHLTGPQQVLEFLGLLV 243
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 3e-14
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 19/208 (9%)
Query: 581 AIFLDYDGTVVPHHALIKKPSRDV-IYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
+F D DGT++ +A P + LRE + +V+GR + + L
Sbjct: 1 LLFFDLDGTLLDPNAHELSPETIEALERLRE----AGVKVVLVTGRSLAEI-KELLKQLP 55
Query: 640 LGIAAEHGYYLRWTKKSEWETSTVAADFE----WKRITEPVMKLYTEATDGSYIEKKETA 695
L + AE+G + E + FE K +K +E G++IE K A
Sbjct: 56 LPLIAENGALIF--YPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIA 113
Query: 696 LVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKR--GYNIVEVKPQGVTKGLVAEKV 753
+ HY A G ++ + LE + N+ + G +EV P GV KG + +
Sbjct: 114 VAIHYVGAELGQEL--DSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQAL 171
Query: 754 LSTMISDGKLPDFVLCVGDDRSDEDMFE 781
L + D +L GD +DE+MFE
Sbjct: 172 LKEL---NGKRDEILAFGDSGNDEEMFE 196
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 6e-09
Identities = 62/263 (23%), Positives = 102/263 (38%), Gaps = 41/263 (15%)
Query: 577 TSRRAIFLDYDGTVV---PHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEW 633
++ A F D DGT+ PH + P +++ L+ L ++ ++SGR V L
Sbjct: 12 SANYAWFFDLDGTLAEIKPHPDQVVVPD-NILQGLQLLATANDGALALISGRSMVELDAL 70
Query: 634 LAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKE 693
P +A HG R +T V R + G+ +E K
Sbjct: 71 AKPYR-FPLAGVHGAERR---DINGKTHIVHLPDAIARDISVQLHTALAQLPGAELEAKG 126
Query: 694 TALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKR--------GYNIVEVKPQGVT 745
A HY+ QA + H +++LA + + G +VE+KP+G
Sbjct: 127 MAFALHYR---------QAPQ---HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTN 174
Query: 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ 805
KG + G+ P F VGDD +DE F +++ G S+ VG
Sbjct: 175 KGEAIAAFMQEAPFAGRTPVF---VGDDLTDEAGFAVVNRLG-GISV---------KVGT 221
Query: 806 KPSKARYYLDDEEDVLALLKGLA 828
++A + L DV + L+ +
Sbjct: 222 GATQASWRLAGVPDVWSWLEMIT 244
|
Length = 266 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 34/262 (12%)
Query: 582 IFLDYDGTVVPHHALIKKP-----SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636
+FLDYDGT+ P ++ P S+ + +R+L T IVSGR + + ++
Sbjct: 101 MFLDYDGTLSP---IVDDPDRAFMSKKMRNTVRKLA--KCFPTAIVSGRCREKVSSFVKL 155
Query: 637 CENLGIAAEHGYYLR-------WTKKSEWETSTVAADFEWKRITEPVMKLY--TEATDGS 687
E L A HG ++ + K+++ A +F I E KL T++ G+
Sbjct: 156 TE-LYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEF-LPVINEVYKKLVEKTKSIPGA 213
Query: 688 YIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEP-VVVKRGYNIVEVKPQ-GVT 745
+E + H++ S +L + + SVL N P +++ +G ++E++P
Sbjct: 214 KVENNKFCASVHFRCVEENKWS----DLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWD 269
Query: 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ 805
KG E +L ++ F + +GDDR+DED F+ + G L I +A
Sbjct: 270 KGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQG--LGILVSKYA----- 322
Query: 806 KPSKARYYLDDEEDVLALLKGL 827
K + A Y L + ++V+ L+ L
Sbjct: 323 KETNASYSLQEPDEVMEFLERL 344
|
Length = 354 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 4e-06
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 37/231 (16%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
+ + D DGT++ + I +++ + LRE + +GR + L+ E
Sbjct: 4 KLLAFDLDGTLLDSNKTISPETKEALARLREK----GVKVVLATGRPLPDV---LSILEE 56
Query: 640 LG----IAAEHGYYLRWTKKSEWETS------TVAADFEWKRITEPVMKLYTEATDGSYI 689
LG + +G + + ++ + ++ + +
Sbjct: 57 LGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKK 116
Query: 690 EKKETALVWHYQDAAPGFGSC----------------QAKELLDHLESVLANEPVVVKRG 733
+ + +P +EL++ L + + V
Sbjct: 117 RGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSS 176
Query: 734 Y-NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI 783
+++ P+GV+KG +++ + + V+ GD +D +M E
Sbjct: 177 GPISLDITPKGVSKGYALQRLAKLLGIK---LEEVIAFGDSTNDIEMLEVA 224
|
Length = 264 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 3e-05
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 799 FACTVGQKPSKARYYLDDEEDVLALLKGLAAAS 831
F+C VG+K S ARY L +DV++ LK LA AS
Sbjct: 898 FSCAVGRKRSNARYLLGSSDDVVSFLKELANAS 930
|
Length = 934 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 8e-04
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 38/278 (13%)
Query: 568 DRIVDAYKRTSRRAIFLDYDGTVVP-----HHALIKKPSRDVIYVLRELCGDSNNTTFIV 622
++I++A R + +FLDYDGT+ P A + R + L + T IV
Sbjct: 101 EQIMEA-SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCF-----PTAIV 154
Query: 623 SGR------GKVSLGE-WLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEP 675
+GR V L E + A + I + R + + A D+ I E
Sbjct: 155 TGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDY-LPMIDEV 213
Query: 676 VMKLY--TEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVV-VKR 732
+L T++T G+ +E + H++ S EL+ + SVL N P + + +
Sbjct: 214 YRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWS----ELVLQVRSVLKNFPTLKLTQ 269
Query: 733 GYNIVEVKPQ-GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSS 791
G + E++P KG E +L ++ F + +GDDR+DED F+ + G
Sbjct: 270 GRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEG-- 327
Query: 792 LPIAPEIFACTVGQKP--SKARYYLDDEEDVLALLKGL 827
F V + P + A Y L D +V+ L L
Sbjct: 328 -------FGILVSKFPKDTDASYSLQDPSEVMDFLARL 358
|
Length = 366 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 8e-04
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 55/310 (17%)
Query: 550 DHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIY-VL 608
++ R W + + +L+ + + + + A+FLDYDGT+ P ++ P R ++ +
Sbjct: 90 TDFAYRTWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSP---IVDDPDRALMSDAM 146
Query: 609 RELCGDSNN--TTFIVSGRGK------VSLGEW----------LAPCENLGIAAEHGYYL 650
R + T I+SGR + V L E + P ++ +H +
Sbjct: 147 RSAVKNVAKYFPTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRE-SVSNDHPNCI 205
Query: 651 RWTKKSEWETSTVAADFEWKRITEPVMKLYTEATD---GSYIEKKETALVWHYQDAAPGF 707
+ T + E + E+ + + V + E+T G+ +E + + HY++
Sbjct: 206 KSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKN 265
Query: 708 GSCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQ-GVTKGLVAEKVLSTM---ISDGK 762
A+ + D L+ P + + G ++EV+P KG E +L ++ D
Sbjct: 266 WPLVAQCVHDVLK----KYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDV 321
Query: 763 LPDFVLCVGDDRSDEDMFESISQATYG-----SSLPIAPEIFACTVGQKPSKARYYLDDE 817
LP ++ GDDR+DED F+ + + G SS+P K S A Y L D
Sbjct: 322 LPIYI---GDDRTDEDAFKVLREGNRGYGILVSSVP------------KESNAFYSLRDP 366
Query: 818 EDVLALLKGL 827
+V+ LK L
Sbjct: 367 SEVMEFLKSL 376
|
Length = 384 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 39.9 bits (92), Expect = 0.004
Identities = 65/399 (16%), Positives = 122/399 (30%), Gaps = 61/399 (15%)
Query: 157 LFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFL 216
+ L R + + + +++ ++ Y IH + L++ P L
Sbjct: 40 IAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGL 99
Query: 217 ----RRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSC 272
+ + L LH P + L + G R +
Sbjct: 100 LALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLL------------GLLRLLLKRLKKAL 147
Query: 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFK 332
+ S LE G + ++ GI + +
Sbjct: 148 RLLADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKFA----------PARIGLLPEG 197
Query: 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLE 392
GK V++ V +D KG+ L + A +L K P++ KLV+V R + +
Sbjct: 198 GKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDI--KLVIVGDGPERREELEKLAKKL-- 253
Query: 393 TYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTI 452
G E + VP E A A+ ++ ++ +G L+ +
Sbjct: 254 ---------------GLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMA 298
Query: 453 CRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITM 512
GTP +AS +V G + V P D++ +ADAL +
Sbjct: 299 A--GTPV------IASDVGGIPEVVEDGETG--------LLVPPGDVEELADALEQLLED 342
Query: 513 SDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRDH 551
++ ++L R A ++ E +
Sbjct: 343 PELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 832 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 100.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.95 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.95 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.95 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.94 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.93 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| PLN02887 | 580 | hydrolase family protein | 99.93 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.93 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.93 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.92 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.92 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.91 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.91 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.91 | |
| PLN02316 | 1036 | synthase/transferase | 99.91 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.9 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.9 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.9 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.9 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.9 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.9 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.9 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.89 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.89 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.89 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.89 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.89 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.88 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.88 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.88 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.88 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.88 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.87 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.87 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.87 | |
| PLN00142 | 815 | sucrose synthase | 99.86 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.86 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.86 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.85 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.85 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.85 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.85 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.84 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.84 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.84 | |
| PLN02423 | 245 | phosphomannomutase | 99.83 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.83 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.83 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.83 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.83 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.83 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.82 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.82 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.82 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.81 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.8 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.8 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.8 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.8 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.8 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.8 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.79 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.79 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.79 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.78 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.78 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.78 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.78 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.78 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.78 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.78 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.78 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.77 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.77 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.76 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.76 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.76 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.75 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.75 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.74 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.72 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.72 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.7 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.7 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.69 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.69 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.68 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.66 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.65 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.65 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.63 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.59 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.49 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.48 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.46 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.38 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.27 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.2 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.17 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.15 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.14 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.14 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.05 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.04 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.02 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.01 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 98.98 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.94 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.9 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.9 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.85 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.85 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.8 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.79 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.77 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.72 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.71 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.66 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.66 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.54 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.46 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.36 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.31 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.3 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 98.3 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.3 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.28 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.25 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.21 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 98.18 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.12 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 98.07 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.05 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.01 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.0 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.97 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.96 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 97.84 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.82 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.81 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.77 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.75 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.73 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.67 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.63 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.63 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.6 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.57 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.56 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.41 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 97.15 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.14 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.13 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 97.11 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.09 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 97.05 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.05 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.97 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.91 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 96.9 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.88 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.88 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.86 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 96.86 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.83 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.76 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.67 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 96.65 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.6 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 96.54 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.48 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.48 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.46 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.34 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.34 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.32 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 96.3 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.18 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 96.15 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.02 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.99 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 95.98 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.93 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 95.91 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.9 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.79 | |
| PLN02940 | 382 | riboflavin kinase | 95.72 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 95.69 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 95.67 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.61 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 95.61 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 95.58 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 95.53 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 95.46 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.34 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 95.34 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 95.33 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 95.25 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.24 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 95.18 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.16 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.13 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.01 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.96 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 94.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 94.84 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 94.84 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 94.75 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 94.74 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 94.7 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 94.63 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 94.57 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.51 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 94.39 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.38 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.32 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 94.17 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 94.0 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 93.86 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.82 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 93.77 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 93.75 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.75 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 93.47 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 93.42 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 93.24 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 93.2 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 93.01 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 92.61 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.44 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 92.33 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.23 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 92.16 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 92.12 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.04 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 91.61 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 91.16 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 91.16 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 91.0 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 90.76 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 90.49 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 90.42 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 90.24 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 90.07 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 89.99 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 89.81 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 89.14 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 89.12 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 89.04 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 88.76 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 88.09 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 87.18 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 87.18 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 86.86 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 86.82 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 86.65 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 86.6 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 86.14 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 84.82 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 84.09 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 83.8 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 83.48 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 83.2 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 83.2 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 82.32 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 82.26 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 81.26 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 81.24 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 80.95 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 80.84 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 80.66 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 80.38 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 80.35 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-190 Score=1691.39 Aligned_cols=832 Identities=65% Similarity=1.132 Sum_probs=786.0
Q ss_pred CCcccccchhhhhcCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCCC-CCCCCCeEEEEEcCCCcceeecCCC-
Q 045882 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSP-SYRHHKKKIIVANFLPLHAQKNLES- 78 (832)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iivsnrlP~~~~~~~~~- 78 (832)
|+||||+|||||++||+..++++.+++|++|++||+++++++++.++.+++.+ +..+.+|+||||||||+.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988877777766 5667789999999999999987554
Q ss_pred CCeEEEecCCchhhhhcccccC-CCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEecCHHHHHHHhhhccccccccc
Q 045882 79 GNWCFSFDDDSLLLQMKDGFSS-DTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPL 157 (832)
Q Consensus 79 ~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lwp~ 157 (832)
++|+|+|++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 7899999999999999988864 378999999999888888988888888999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChh
Q 045882 158 FHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSE 237 (832)
Q Consensus 158 ~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e 237 (832)
|||+++..|+++.+|++++|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888877779999999999999999999999999986799999999999999999999999999999999999999
Q ss_pred hhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCC
Q 045882 238 IYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNH 317 (832)
Q Consensus 238 ~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~ 317 (832)
+||+||+|++||+|||+||+|||||++|+|||++||+|+||+++..++|++++.|+||+++|+++|+|||++.|...+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHcC--CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHH
Q 045882 318 PSSSIKVKEIREQFK--GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYT 395 (832)
Q Consensus 318 ~~~~~~~~~l~~~~~--~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~ 395 (832)
|++.+++++++++++ |+++|+||||+|++|||.+||+|||+||++||+|+||++||||++|+|+++++|++++.++++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 999999999999995 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCce
Q 045882 396 ITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSM 475 (832)
Q Consensus 396 lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~ 475 (832)
+|+|||++||+.+|+||+|+.+.++++|+.|||++||||+|||+|||||||++||+|||++.+.++++++.+.+.+++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999988878888887777788999
Q ss_pred EEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhhcccc
Q 045882 476 LVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRDHYSKR 555 (832)
Q Consensus 476 lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~ 555 (832)
||+|||+||+++|++|++|||||++++|+||++||+||++||+.||++++++|++||+.+|+++||++|+++|++|.+++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred ccccCcccC------------CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEc
Q 045882 556 CWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVS 623 (832)
Q Consensus 556 ~~~~~~~~~------------l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S 623 (832)
||++|+|++ |+++.++++|+++++|+|++||||||++..+....|+++++++|++|++++|+.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 999988763 78899999999999999999999999986544568999999999999999999999999
Q ss_pred CCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccC
Q 045882 624 GRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDA 703 (832)
Q Consensus 624 GR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~a 703 (832)
||++..+++||+.+++++++|+||++++++++..|+...+..+..|++.+.++++.|++++||+++|.|+++++|||+++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988789999999999999888789866554567899999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHc
Q 045882 704 APGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI 783 (832)
Q Consensus 704 d~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a 783 (832)
||+++.++++++.++++..+.+.++.+.+|+.++||+|+++|||.|++.|++.+...|+++|+++|||||.|||+||+++
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 99999999999999999998888888999999999999999999999999876544488999999999999999999999
Q ss_pred ccccCCCCCCCCCcEEEEEeCCcccccceEeCChhHHHHHHHHhhhhcC
Q 045882 784 SQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLAAASK 832 (832)
Q Consensus 784 ~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 832 (832)
+....+.+++..+++|+|+||.++|+|+|+++++++|.++|+.|+++|+
T Consensus 801 ~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~ 849 (854)
T PLN02205 801 TSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSE 849 (854)
T ss_pred hhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcch
Confidence 8654556677788889999999999999999999999999999998763
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-162 Score=1438.05 Aligned_cols=746 Identities=36% Similarity=0.659 Sum_probs=671.3
Q ss_pred CCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCch-HHHHHHHhhccCeeEEEEe
Q 045882 58 HKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTS-EQEEVAQKLLDEFNCVPTF 136 (832)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 136 (832)
+.|+||||||||+.++++++ |.|+++++.|||+++|.+ + +..+++||||+|..++.+ +++.+... +.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEe
Confidence 68999999999999988654 789999999999999975 5 578999999999877653 45555544 5789999999
Q ss_pred cCHHHHHHHhhhccccccccccccCC-CCCC-CCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHH
Q 045882 137 LSSDLQKKFYHGFCKQYLWPLFHYML-PICP-DYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPT 214 (832)
Q Consensus 137 l~~~~~~~~y~gf~~~~lwp~~H~~~-~~~~-~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~ 214 (832)
|+++++++||+||||++|||+|||+. +..+ ....+|++++|++|++||++||++|+++++|+ |+|||||||||+||.
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~g-D~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEG-DVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHH
Confidence 99999999999999999999999973 2111 01146888999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcC
Q 045882 215 FLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFG 294 (832)
Q Consensus 215 ~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~g 294 (832)
|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|++||++||+|+||++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999988643 2589999
Q ss_pred eEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE
Q 045882 295 RTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ 374 (832)
Q Consensus 295 r~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (832)
|.+.|.++|+|||++.|...+..|++.+++++++++++|+++||||||||++|||.+||+||++||++||+|++||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
|+.|+|+++++|++++.++.++|++||++||+.+|.||+|+.+.++++|+.+||++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCH
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDV 533 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~ 533 (832)
.+ ++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+
T Consensus 484 ~~---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~ 548 (934)
T PLN03064 484 DS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTA 548 (934)
T ss_pred cC---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCH
Confidence 74 57999999999999999 589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCcccCCCHHHHHHHhhccCcEEEEEecCCCcCCCCCC-----------CCCCCH
Q 045882 534 AYWAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHAL-----------IKKPSR 602 (832)
Q Consensus 534 ~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~-----------~~~~s~ 602 (832)
.+|+++|+++|.++...+..+ +..+ -..|+.+.+.++|+++++|+|||||||||++..+. ...|++
T Consensus 549 ~~Wa~~fl~~L~~~~~~~~~~-~~~~--~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p 625 (934)
T PLN03064 549 QEWAETFVSELNDTVVEAQLR-TRQV--PPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHP 625 (934)
T ss_pred HHHHHHHHHHHHHHHhhhhcc-cccc--CCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCH
Confidence 999999999999986554322 2211 12489999999999999999999999999985432 234789
Q ss_pred HHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEE-cCcccchhHHHHHHHHHHHHH
Q 045882 603 DVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWET-STVAADFEWKRITEPVMKLYT 681 (832)
Q Consensus 603 ~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~-~~~~~~~~w~~~v~~i~~~~~ 681 (832)
+++++|++||+++++.|+|+|||++..+++||+.+ +++++|+||++++.+ +..|.. .....+.+|++.+.++|++|+
T Consensus 626 ~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~-~~~w~~~~~~~~~~~W~~~v~~ile~~~ 703 (934)
T PLN03064 626 ELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHT-KGEWMTTMPEHLNMDWVDSVKHVFEYFT 703 (934)
T ss_pred HHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecC-CCcceeccccccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987 799999999999976 457874 333346789999999999999
Q ss_pred hcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHH-HHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhC
Q 045882 682 EATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHL-ESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISD 760 (832)
Q Consensus 682 e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l-~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~ 760 (832)
+++||+++|.|+++++|||+++||+++..||+++.+++ ...+.+.++.|..|+.+|||+|.++|||.|++.|++.+...
T Consensus 704 eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~ 783 (934)
T PLN03064 704 ERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHS 783 (934)
T ss_pred hcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999 44566778999999999999999999999999999976432
Q ss_pred C---CCcceEEEEeCChh-hHHHHHHcccccCC------------------------------------------C----
Q 045882 761 G---KLPDFVLCVGDDRS-DEDMFESISQATYG------------------------------------------S---- 790 (832)
Q Consensus 761 g---i~~d~vl~~GDd~N-D~~Mf~~a~~~~~~------------------------------------------~---- 790 (832)
+ ..+|||+|+|||.+ ||+||+++...... +
T Consensus 784 ~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (934)
T PLN03064 784 KSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSS 863 (934)
T ss_pred cccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCccccc
Confidence 2 35899999999875 99999997542110 0
Q ss_pred ---------C----------------CC-CCCcEEEEEeCCcccccceEeCChhHHHHHHHHhhhhcC
Q 045882 791 ---------S----------------LP-IAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLAAASK 832 (832)
Q Consensus 791 ---------~----------------~~-~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 832 (832)
+ +. ...+.|+|+||.|+|.|+|++++.+||+.+|+.|+++++
T Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (934)
T PLN03064 864 AKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASS 931 (934)
T ss_pred ccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhcccc
Confidence 0 00 122359999999999999999999999999999998764
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-154 Score=1381.29 Aligned_cols=746 Identities=36% Similarity=0.656 Sum_probs=667.0
Q ss_pred CCCCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCch-HHHHHHHhhccCeeEEE
Q 045882 56 RHHKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTS-EQEEVAQKLLDEFNCVP 134 (832)
Q Consensus 56 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~p 134 (832)
....|+||||||||+.++++++ |+|+|+++.|||+++|.+ + ...+++||||+|.+++++ ++..+.. .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~-~~~~~~~~~ggl~~al~~-~-~~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE-DSWSLEMSPGGLVSALLG-V-KEFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecCC-CceEEeeCCCCHHHHHHH-H-HhcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 4577999999999999887643 789999999999999975 5 457999999999876654 4444444 467899999
Q ss_pred EecCHHHHHHHhhhccccccccccccC-CCCCCC-CccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccH
Q 045882 135 TFLSSDLQKKFYHGFCKQYLWPLFHYM-LPICPD-YGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVL 212 (832)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~lwp~~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~ll 212 (832)
||| ++++++||+||||++|||+|||+ .+..+. ...+|.++.|++|++||++||++|++.++|+ |+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEG-DVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhhH
Confidence 999 99999999999999999999998 232221 1145667899999999999999999999985 9999999999999
Q ss_pred HHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEE
Q 045882 213 PTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEY 292 (832)
Q Consensus 213 p~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~ 292 (832)
|+|||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+|++++++... ++.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999886432 4789
Q ss_pred cCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEE
Q 045882 293 FGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVL 372 (832)
Q Consensus 293 ~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 372 (832)
+|+.++|.++|+|||++.|.+....+++....++++++++++++|++|||+|+.|||.++|+||++||++||+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999999887777777888889999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeee
Q 045882 373 VQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTI 452 (832)
Q Consensus 373 vqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a 452 (832)
|||+.|+|+++++|+++++++++++.+||.+||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcC
Q 045882 453 CRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (832)
||.+ +.|++|+|||+|+++.+ .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+|
T Consensus 398 ~g~p---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~ 462 (797)
T PLN03063 398 CQKA---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH 462 (797)
T ss_pred eecC---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhC
Confidence 9875 47999999999999999 4899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhhccccccccCcccCCCHHHHHHHhhccCcEEEEEecCCCcCCCCC-----CCCCCCHHHHH
Q 045882 532 DVAYWAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA-----LIKKPSRDVIY 606 (832)
Q Consensus 532 ~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~-----~~~~~s~~~~~ 606 (832)
|+.+|+++|+++|.++++.+..+....+ ..|+.+.+.++|+++++++|||||||||++..+ ....|++++++
T Consensus 463 ~~~~Wa~~fl~~l~~~~~~~~~~~~~~~---~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~ 539 (797)
T PLN03063 463 SAQKWADDFMSELNDIIVEAELRTRNIP---LELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKE 539 (797)
T ss_pred CHHHHHHHHHHHHHHHhhhhhhcccCCC---CCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHH
Confidence 9999999999999999876543221111 248999999999999999999999999998543 23458899999
Q ss_pred HHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcC-cccchhHHHHHHHHHHHHHhcCC
Q 045882 607 VLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETST-VAADFEWKRITEPVMKLYTEATD 685 (832)
Q Consensus 607 ~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~-~~~~~~w~~~v~~i~~~~~e~~~ 685 (832)
+|++|++++++.|+|+|||+...+++||+.+ +++++|+||++++.. +..|.... ...+.+|++.+.++|++|++++|
T Consensus 540 ~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtp 617 (797)
T PLN03063 540 TLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTP 617 (797)
T ss_pred HHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999976 699999999999875 45787543 23367899999999999999999
Q ss_pred ceEEeecceeEEEEeccCCCCCCchhHHHHHHHHH-HHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhC---C
Q 045882 686 GSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLE-SVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISD---G 761 (832)
Q Consensus 686 gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~-~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~---g 761 (832)
|+++|.|+++++||||++||+++..+++++.+++. ..+.+.++.+..|++++||+|+++|||.|++.|++.+... +
T Consensus 618 Gs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~ 697 (797)
T PLN03063 618 RSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMT 697 (797)
T ss_pred CcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccC
Confidence 99999999999999999999999899999999984 4556678999999999999999999999999999976321 2
Q ss_pred CCcceEEEEeCCh-hhHHHHHHcccccCC--------C-----------CCCCCCcEEEEEeCCcccccceEeCChhHHH
Q 045882 762 KLPDFVLCVGDDR-SDEDMFESISQATYG--------S-----------SLPIAPEIFACTVGQKPSKARYYLDDEEDVL 821 (832)
Q Consensus 762 i~~d~vl~~GDd~-ND~~Mf~~a~~~~~~--------~-----------~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~ 821 (832)
..+|||+|+||+. .||+||+++...... . .....+++|+|+||.++|+|+|||++++||.
T Consensus 698 ~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV~ 777 (797)
T PLN03063 698 TPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKARYVLDSSNDVV 777 (797)
T ss_pred CCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCccCeecCCCHHHHH
Confidence 3689999999984 699999998742210 0 0123567899999999999999999999999
Q ss_pred HHHHHhhhhc
Q 045882 822 ALLKGLAAAS 831 (832)
Q Consensus 822 ~~L~~l~~~~ 831 (832)
++|+.|+++.
T Consensus 778 ~lL~~l~~~~ 787 (797)
T PLN03063 778 SLLHKLAVAN 787 (797)
T ss_pred HHHHHHhccC
Confidence 9999999754
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-144 Score=1299.36 Aligned_cols=720 Identities=36% Similarity=0.671 Sum_probs=658.4
Q ss_pred CeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCc---hHHHHHHHhhccCeeEEEE
Q 045882 59 KKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDT---SEQEEVAQKLLDEFNCVPT 135 (832)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv 135 (832)
+|+||||||||+.+++++ |+|++++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988754 589999999999999977554 5899999999976554 2233343 34678999999
Q ss_pred ecCHHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHH
Q 045882 136 FLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTF 215 (832)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~ 215 (832)
||++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999876 47999999999999999999999999985 9999999999999999
Q ss_pred HHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCe
Q 045882 216 LRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGR 295 (832)
Q Consensus 216 lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr 295 (832)
||++.|+++||||||+|||++|+||+||+|++||+|||+||+|||||++|++||++||.+++++++... .+.++||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCE
Confidence 999999999999999999999999999999999999999999999999999999999999999875432 5889999
Q ss_pred EEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEE
Q 045882 296 TIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQI 375 (832)
Q Consensus 296 ~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (832)
.++|+++|+|||++.|.+....+++....+++++.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999888778887888889998999999999999999999999999999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeec
Q 045882 376 VNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 376 ~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
+.|+|...++|+++++++.+++++||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHH
Q 045882 456 GTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAY 535 (832)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (832)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+++|++.|++++++++.+||+.+
T Consensus 387 ~---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~ 451 (726)
T PRK14501 387 D---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHK 451 (726)
T ss_pred C---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 5 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcccCCCHHHHHHHhhccCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhc
Q 045882 536 WAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCG 613 (832)
Q Consensus 536 W~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~ 613 (832)
|+++|++++.++++.+.......+. .++.+.+.++|+++++|+|++||||||++... ....|+++++++|++|++
T Consensus 452 w~~~~l~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~ 528 (726)
T PRK14501 452 WASDFLDELREAAEKNKAFASKPIT---PAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAA 528 (726)
T ss_pred HHHHHHHHHHHHHhhhhccccccCC---ccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHc
Confidence 9999999999998766433322222 28999999999999999999999999998432 235689999999999987
Q ss_pred cCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecc
Q 045882 614 DSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKE 693 (832)
Q Consensus 614 d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~ 693 (832)
++|+.|+|+|||++..++++|+.++ +++|++||++++.++ ..|..... .+..|++.+.++++.+.++++|+++|.|+
T Consensus 529 d~g~~V~ivSGR~~~~l~~~~~~~~-l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~~~~~gs~ie~k~ 605 (726)
T PRK14501 529 DPNTDVAIISGRDRDTLERWFGDLP-IHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFVDRTPGSFIEEKE 605 (726)
T ss_pred CCCCeEEEEeCCCHHHHHHHhCCCC-eEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHHhcCCCcEEEEcc
Confidence 7899999999999999999998874 799999999998654 56765433 46789999999999999999999999999
Q ss_pred eeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCC
Q 045882 694 TALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDD 773 (832)
Q Consensus 694 ~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd 773 (832)
.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|++++++ ++++++++|||||
T Consensus 606 ~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~~~~d~vl~~GD~ 680 (726)
T PRK14501 606 ASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----AGPYDFVLAIGDD 680 (726)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----cCCCCEEEEECCC
Confidence 99999999999999888889999999988888888889999999999999999999999988 5688999999999
Q ss_pred hhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCChhHHHHHHHHhhh
Q 045882 774 RSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 774 ~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
.||++||+.++.. .++|+||++++.|+|++++++||+++|+.|++
T Consensus 681 ~nDe~Mf~~~~~~-----------~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 681 TTDEDMFRALPET-----------AITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CChHHHHHhcccC-----------ceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 9999999998531 28999999999999999999999999999985
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-133 Score=1164.54 Aligned_cols=728 Identities=53% Similarity=0.924 Sum_probs=684.1
Q ss_pred CCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEec
Q 045882 58 HKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFL 137 (832)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 137 (832)
..|+|+||||||+.++++.+++.|.|+++.+||+.+++.++. +++..||||++.++++++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 469999999999999776777899999999999999987666 6899999999988999999999999999999999999
Q ss_pred CHHHHHHHhhhccccccccccccC-CCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHH
Q 045882 138 SSDLQKKFYHGFCKQYLWPLFHYM-LPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFL 216 (832)
Q Consensus 138 ~~~~~~~~y~gf~~~~lwp~~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~l 216 (832)
+++....+|+||||++|||+|||+ .|..+... .|+.+.|.+|+.+|+.|||+|++.++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 66666554 77899999999999999999999999 4699999999999999999
Q ss_pred HhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeE
Q 045882 217 RRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRT 296 (832)
Q Consensus 217 r~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~ 296 (832)
|++.++++||||+|+|||++|+|||+|.|++||.+|+++|+|||||++|+|||++||.|++++++.++.++.++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888899999999
Q ss_pred EEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEe
Q 045882 297 IYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIV 376 (832)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 376 (832)
+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecC
Q 045882 377 NPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQG 456 (832)
Q Consensus 377 ~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 456 (832)
+|+++++++|++++.++..++.+||++||+..++||+++...++..++.++|.+||||++++++|||||+++||++|++.
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999884
Q ss_pred CCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHH
Q 045882 457 TPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAY 535 (832)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (832)
+++++|+|||+|+++++ +++++|||||.+++|.+|..|++|+++|++.|+.++++++..|++.+
T Consensus 399 ---------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~ 463 (732)
T KOG1050|consen 399 ---------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVY 463 (732)
T ss_pred ---------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHH
Confidence 57999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcccCCCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccC
Q 045882 536 WAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDS 615 (832)
Q Consensus 536 W~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~ 615 (832)
|+.+|++.+.+.++... ....-+.. |..+.+++.|+++++|+|++|||||+++..++. ++..|+.||.|+
T Consensus 464 W~~~~~~~l~~~~~~~~-~~~~~~~~---l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~~~l~~L~~dp 533 (732)
T KOG1050|consen 464 WAKSFLQGLKRIWKVGF-LGFRVTPL---LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AISILKDLCSDP 533 (732)
T ss_pred HHHHHHHhhhhhhhhcc-cccccccc---cChhHhhhhhhhccceEEEecccccccCCCCch------HHHHHHHHhcCC
Confidence 99999997777665543 11111111 788999999999999999999999999854322 899999999999
Q ss_pred CCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeeccee
Q 045882 616 NNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETA 695 (832)
Q Consensus 616 g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~ 695 (832)
+|.|+|+|||++..+.+|+..++++|++||||++++++++ |+... .+++|++.+++++++|++||||+++|.|+++
T Consensus 534 ~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~ 609 (732)
T KOG1050|consen 534 KNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTPGSYIERKETA 609 (732)
T ss_pred CCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCCCceecccCce
Confidence 9999999999999999999999999999999999999877 99887 7899999999999999999999999999999
Q ss_pred EEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChh
Q 045882 696 LVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRS 775 (832)
Q Consensus 696 l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~N 775 (832)
++|||+++||++|.+||+|+.++|+. .+.++.++.|+..|||.|.|+|||.++..++..+ ..++|+++|+||+.+
T Consensus 610 l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~df~~c~g~d~t 684 (732)
T KOG1050|consen 610 LVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPDFVLCIGDDRT 684 (732)
T ss_pred EEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCCcceEEEecCCCC
Confidence 99999999999999999999999998 7899999999999999999999999999999998 567899999999999
Q ss_pred hHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCChhHHHHHHH
Q 045882 776 DEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLK 825 (832)
Q Consensus 776 D~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~ 825 (832)
|++||+++......... .+.|+|++|.++|+|+|+++++.||.++|+
T Consensus 685 Ded~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 685 DEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred hHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 99999999875433222 678999999999999999999999999986
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-120 Score=1017.09 Aligned_cols=456 Identities=28% Similarity=0.519 Sum_probs=421.0
Q ss_pred CCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEec
Q 045882 58 HKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFL 137 (832)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 137 (832)
++|+||||||+|+... + +.+.|||+++|.+.+. ..+++||||+|...++ .+.+......+++|.||+|
T Consensus 1 m~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L 68 (474)
T PRK10117 1 MSRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNL 68 (474)
T ss_pred CCCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecC
Confidence 3689999999996321 1 3457899999988765 5799999999964322 2224333346799999999
Q ss_pred CHHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHH
Q 045882 138 SSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLR 217 (832)
Q Consensus 138 ~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr 217 (832)
+++++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++||
T Consensus 69 ~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~~-D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 69 SEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKDD-DIIWIHDYHLLPFASELR 142 (474)
T ss_pred CHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeccHhhHHHHHHH
Confidence 999999999999999999999999765 47999999999999999999999999985 999999999999999999
Q ss_pred hhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEE
Q 045882 218 RRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTI 297 (832)
Q Consensus 218 ~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~ 297 (832)
++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v 219 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAF 219 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999876332 2567889999
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEec
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVN 377 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 377 (832)
.|+++|+|||++.|...+..+ ...+.++++++++|+++|+||||+||+|||.++|+||++||++||+|+||++|+||+.
T Consensus 220 ~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ 298 (474)
T PRK10117 220 RTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (474)
T ss_pred EEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC
Confidence 999999999999999887755 5677889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCC
Q 045882 378 PARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGT 457 (832)
Q Consensus 378 p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 457 (832)
|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||+|||+|||||||++||+|||.+
T Consensus 299 psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~- 377 (474)
T PRK10117 299 TSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (474)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHH
Q 045882 458 PKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWA 537 (832)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~ 537 (832)
+++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+
T Consensus 378 -------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~ 444 (474)
T PRK10117 378 -------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQ 444 (474)
T ss_pred -------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHH
Confidence 2579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 045882 538 HSFMQDLERACR 549 (832)
Q Consensus 538 ~~~l~~l~~~~~ 549 (832)
++||.+|.++..
T Consensus 445 ~~fL~~L~~~~~ 456 (474)
T PRK10117 445 ECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHhhh
Confidence 999999998753
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-119 Score=1013.92 Aligned_cols=462 Identities=27% Similarity=0.454 Sum_probs=428.0
Q ss_pred EEcCCCcceeecCCC-CCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCc-hHH-HHHHHhhccCeeEEEEecCHH
Q 045882 64 VANFLPLHAQKNLES-GNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDT-SEQ-EEVAQKLLDEFNCVPTFLSSD 140 (832)
Q Consensus 64 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 140 (832)
||||||+.+.+++++ .+|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999987643 35888999999999998877656789999999975221 111 112222245799999999999
Q ss_pred HHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhc
Q 045882 141 LQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRF 220 (832)
Q Consensus 141 ~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~ 220 (832)
+++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAEG-ATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 57999999999999999999999999985 999999999999999999999
Q ss_pred CCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccC---------------
Q 045882 221 HRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKR--------------- 285 (832)
Q Consensus 221 ~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~--------------- 285 (832)
|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998875432
Q ss_pred --ceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhC
Q 045882 286 --GYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVH 363 (832)
Q Consensus 286 --~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~ 363 (832)
..+++.++||.++|+++|+|||++.|.+....+++.++++++|++++|+++|++|||+|++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 123588999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCC
Q 045882 364 PELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGM 443 (832)
Q Consensus 364 P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGm 443 (832)
|+|+||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 045882 444 NLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEK 523 (832)
Q Consensus 444 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~ 523 (832)
|||++||||||++ ++|+||+|||+|++++|.+|++|||||++++|+||.+||+||.+||+.|+++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999884 4799999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCHHHHHHHHHHHHHH
Q 045882 524 HYRYICSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 524 ~~~~v~~~~~~~W~~~~l~~l~~ 546 (832)
++++|.+||+.+|+++||.+|..
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999864
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-119 Score=1023.55 Aligned_cols=467 Identities=46% Similarity=0.854 Sum_probs=358.7
Q ss_pred eEEEEEcCCCcceeecCCCCC--eEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchH--HHHHHHhhccCeeEEEE
Q 045882 60 KKIIVANFLPLHAQKNLESGN--WCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSE--QEEVAQKLLDEFNCVPT 135 (832)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~pv 135 (832)
|+||||||||+.+++++++|. |+++.+.|||+.+|.+ +.+..+++||||+|.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~-l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDP-LLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHH-HHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHH-HHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999999875565 8888888999999866 444589999999998766544 45566677899999999
Q ss_pred ecCHHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHH
Q 045882 136 FLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTF 215 (832)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~ 215 (832)
||+++++++||+||||++|||+|||.++..+. ...|+++.|++|++||++||++|++.++| +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD-LARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCcccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999998762222 26899999999999999999999999997 59999999999999999
Q ss_pred HHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCe
Q 045882 216 LRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGR 295 (832)
Q Consensus 216 lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr 295 (832)
||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.+.+| ++.|+||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 7999999
Q ss_pred EEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCC-CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE
Q 045882 296 TIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKG-KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ 374 (832)
Q Consensus 296 ~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (832)
.++|.++|+|||++.|...+.++++.++.+++++++++ +++|+||||+|++|||.+||+||++||++||+|+|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 59999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
|+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|||++||||++||+|||||||++||++||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccCC-CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCH
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDV 533 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~ 533 (832)
++ ++|+||+|||+|++++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||+
T Consensus 397 ~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~ 461 (474)
T PF00982_consen 397 DD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDV 461 (474)
T ss_dssp -T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-H
T ss_pred cC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCH
Confidence 85 479999999999999997 67999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 045882 534 AYWAHSFMQDLER 546 (832)
Q Consensus 534 ~~W~~~~l~~l~~ 546 (832)
.+|+++||++|++
T Consensus 462 ~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 462 QWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-113 Score=954.12 Aligned_cols=467 Identities=40% Similarity=0.681 Sum_probs=433.1
Q ss_pred CCCCCCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEE
Q 045882 54 SYRHHKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCV 133 (832)
Q Consensus 54 ~~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (832)
+.....|+||||||+|+...+..+++...+..+.|||+++|++. ....+++|+||+|...++.+..........+++..
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~-~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~ 88 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPL-LRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSA 88 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchh-hHhhcceEEecCceeccccccchhhhhccccceEE
Confidence 34677899999999999987666667788899999999999764 44689999999997654223222233335689999
Q ss_pred EEecCHHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHH
Q 045882 134 PTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLP 213 (832)
Q Consensus 134 pv~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp 213 (832)
||+++.+++++||+||||++|||+|||+.+. ..|++++|.+|++||++|||+|++.++++ |+||||||||+|+|
T Consensus 89 ~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-DiIWVhDYhL~L~P 162 (486)
T COG0380 89 PVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLVP 162 (486)
T ss_pred EEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEechhhhhH
Confidence 9999999999999999999999999999865 57999999999999999999999999985 99999999999999
Q ss_pred HHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEE--
Q 045882 214 TFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLE-- 291 (832)
Q Consensus 214 ~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~-- 291 (832)
.|||++.|+++||||||+|||++|+|||||+|++|++|||+||+|||||++|++||+++|+|+++.... ..+.
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~ 237 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFN 237 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----cccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred -EcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCC-CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCc
Q 045882 292 -YFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKG-KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGK 369 (832)
Q Consensus 292 -~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~ 369 (832)
++|+.+.+..+|+|||+..|.....++.+..+..++++.+.+ +++|+||||+|+.||+..+++||++||++||+|+||
T Consensus 238 ~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~k 317 (486)
T COG0380 238 GADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGK 317 (486)
T ss_pred ccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCc
Confidence 458999999999999999999999999998999999999976 999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCccee
Q 045882 370 LVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYK 449 (832)
Q Consensus 370 vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~E 449 (832)
|+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+.++++++++.+||++|||+++||+|||||||++|
T Consensus 318 vvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakE 397 (486)
T COG0380 318 VVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKE 397 (486)
T ss_pred eEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh
Q 045882 450 YTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYIC 529 (832)
Q Consensus 450 a~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~ 529 (832)
|+|||.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|.
T Consensus 398 yVa~q~~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~ 462 (486)
T COG0380 398 YVAAQRD---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVL 462 (486)
T ss_pred HHHhhcC---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 9999884 5799999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 045882 530 SHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 530 ~~~~~~W~~~~l~~l~~~ 547 (832)
+||+++|+++|+.+|.+.
T Consensus 463 ~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 463 THDVARWANSFLDDLAQA 480 (486)
T ss_pred hhhHHHHHHHHHHHHHhc
Confidence 999999999999999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-107 Score=926.86 Aligned_cols=454 Identities=39% Similarity=0.696 Sum_probs=424.3
Q ss_pred eEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCc-hHHHHHHHhhccCeeEEEEecC
Q 045882 60 KKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDT-SEQEEVAQKLLDEFNCVPTFLS 138 (832)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~~~~~~~~~~~~~~~pv~l~ 138 (832)
|+||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++.++...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988754 2 56778999999988665 5799999999976553 3344555566788999999999
Q ss_pred HHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHh
Q 045882 139 SDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRR 218 (832)
Q Consensus 139 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~ 218 (832)
+++++.||+||||++|||+|||+++. .+|++++|++|++||++||++|++.++|+ |+|||||||||+||.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~-d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQPG-DIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999654 57999999999999999999999999984 9999999999999999999
Q ss_pred hcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEE
Q 045882 219 RFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIY 298 (832)
Q Consensus 219 ~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~ 298 (832)
+.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||++++|+++... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999886542 4678899999
Q ss_pred EEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecC
Q 045882 299 VKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNP 378 (832)
Q Consensus 299 i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (832)
|.++|+|||++.|.+....+++.+..++++++++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888778888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCC
Q 045882 379 ARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTP 458 (832)
Q Consensus 379 ~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~ 458 (832)
+|+++++|+++++++++++++||.+||..+|.||+++.+.++++++.++|++|||||+||++||||||++|||||+.+
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred CchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 459 KMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
+.|+||+|+++|+++.+.+|++|||||++++|+||.++|+|+++||+.|+++++++|.+||+.+|++
T Consensus 382 -------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 448 (456)
T TIGR02400 382 -------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRE 448 (456)
T ss_pred -------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 045882 539 SFMQDLE 545 (832)
Q Consensus 539 ~~l~~l~ 545 (832)
+|+.+|.
T Consensus 449 ~~l~~l~ 455 (456)
T TIGR02400 449 DFLSDLN 455 (456)
T ss_pred HHHHHhh
Confidence 9999884
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-97 Score=854.72 Aligned_cols=459 Identities=44% Similarity=0.779 Sum_probs=428.5
Q ss_pred eEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEecCH
Q 045882 60 KKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFLSS 139 (832)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 139 (832)
|+||||||+|+.++++++ |.|.++++.|||+.+|.+.+ +..+++||||++.+.+.++.+.+.+.+.++|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~-~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLL-KRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHH-hcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 68999999999999997644 4579999999998776544444555668899999999999
Q ss_pred HHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhh
Q 045882 140 DLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRR 219 (832)
Q Consensus 140 ~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~ 219 (832)
++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|.+.++| +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 5799999999999999999999999997 499999999999999999999
Q ss_pred cCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEE
Q 045882 220 FHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYV 299 (832)
Q Consensus 220 ~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i 299 (832)
.|+++||||+|||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886552 368899999999
Q ss_pred EEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCC
Q 045882 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPA 379 (832)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 379 (832)
.++|+|||++.|.+....++..++.++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998776666666667777778899999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCC
Q 045882 380 RSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPK 459 (832)
Q Consensus 380 r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~ 459 (832)
|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||.+||||||++|||||+.+
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999885
Q ss_pred chhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHH
Q 045882 460 MDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHS 539 (832)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~ 539 (832)
++|+||+|+++|+++.+.+|++|||+|++++|+||.++|+|+++|++.+++++++++.++++..|+++
T Consensus 387 ------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~ 454 (460)
T cd03788 387 ------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANS 454 (460)
T ss_pred ------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 47999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 045882 540 FMQDL 544 (832)
Q Consensus 540 ~l~~l 544 (832)
|+++|
T Consensus 455 ~l~~l 459 (460)
T cd03788 455 FLDDL 459 (460)
T ss_pred HHHhh
Confidence 99987
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=354.66 Aligned_cols=527 Identities=14% Similarity=0.125 Sum_probs=330.1
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhh-----------------cCCchHHH-HHHHHhCCEEeec
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR-----------------TLPVRNEI-LKALLNADLIGFH 261 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r-----------------~lp~r~~i-l~~ll~~dligf~ 261 (832)
|+|+-|+++--.+...|++++ ++|..++.|+- ..+-++ .++.|-+. -..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 999999999888888888876 68999999963 111111 01222221 2347789999988
Q ss_pred ChhhHHHHHHHH-------HHHhCCcccccCceeeEEEcCe-EEEEEEeecCCCchHHHhhcCCCCh-------------
Q 045882 262 TFDYARHFLSCC-------SRMLGLDYESKRGYIGLEYFGR-TIYVKILHVGIHMGRLESALNHPSS------------- 320 (832)
Q Consensus 262 t~~~~~~Fl~~~-------~r~l~~~~~~~~~~~~~~~~gr-~~~i~i~P~GId~~~~~~~~~~~~~------------- 320 (832)
|......-...- .|.|.. ...+ ++..+|+ .-++.|+|+|||+++|.+.....+.
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 877665432110 011100 0111 2333333 2278899999999999864211110
Q ss_pred HHHHHHHHHHc--CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHH----HHHHHHHH
Q 045882 321 SIKVKEIREQF--KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDV----QDAKLETY 394 (832)
Q Consensus 321 ~~~~~~l~~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~----~~l~~ev~ 394 (832)
.....+++..+ +++++||+|+|+++.||+..+|+||..+.+..+.. ++++ ++|... ...+. .++..++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00112344333 57889999999999999999999999987543321 2333 345321 11111 12334555
Q ss_pred HHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc----CcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCC
Q 045882 395 TITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALA----ECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVC 470 (832)
Q Consensus 395 ~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~ 470 (832)
+++++.+. ...+.+.++++++++.++|+.| ||||+||.+|||||+++|||||+
T Consensus 539 ~li~~lgL-------~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG---------------- 595 (1050)
T TIGR02468 539 KLIDKYDL-------YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG---------------- 595 (1050)
T ss_pred HHHHHhCC-------CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----------------
Confidence 55555432 2234456789999999999988 69999999999999999999994
Q ss_pred CCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 471 PRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 471 ~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+. ++.++...++.++.+..+++...++.+++.+...
T Consensus 596 ---lPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 596 ---LPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred ---CCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 4799999999988883 59999999999999999999974 4555556666778888899999999999888876
Q ss_pred HHhhcccccc-------------c--------cCcccC-----------------CCH----HHHHHHhh----------
Q 045882 548 CRDHYSKRCW-------------G--------IGFGLS-----------------LSV----DRIVDAYK---------- 575 (832)
Q Consensus 548 ~~~~~~~~~~-------------~--------~~~~~~-----------------l~~----~~i~~~y~---------- 575 (832)
...+..-... + +++.++ ++. ..+.++.+
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1050)
T TIGR02468 672 RPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSS 751 (1050)
T ss_pred hccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccc
Confidence 5444111100 0 000010 000 01111111
Q ss_pred ---------------ccCcEEEE--EecCCCcCCCCCCCCCCCHHHHH-HHHHhh---ccCCCeEEEEcCCChhhHHHHh
Q 045882 576 ---------------RTSRRAIF--LDYDGTVVPHHALIKKPSRDVIY-VLRELC---GDSNNTTFIVSGRGKVSLGEWL 634 (832)
Q Consensus 576 ---------------~s~~rlI~--lD~DGTLl~~~~~~~~~s~~~~~-~L~~L~---~d~g~~V~I~SGR~~~~l~~~~ 634 (832)
...+++|+ +|+|+| .. ..+.++ +++.+. ....+.++++|||+...+...+
T Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~--------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l 822 (1050)
T TIGR02468 752 AKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD--------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFL 822 (1050)
T ss_pred cccccccccccCccccccceEEEEEeccCCC-CC--------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHH
Confidence 11256777 999999 32 123232 233332 2345889999999999999988
Q ss_pred cC--CC---CceEEEeCCEEEEeCC-----CccEEEcC---cccchhH-HHHHHHHHHHHHhc--------CCceEEeec
Q 045882 635 AP--CE---NLGIAAEHGYYLRWTK-----KSEWETST---VAADFEW-KRITEPVMKLYTEA--------TDGSYIEKK 692 (832)
Q Consensus 635 ~~--l~---~l~liaenGa~i~~~~-----~~~w~~~~---~~~~~~w-~~~v~~i~~~~~e~--------~~gs~ie~k 692 (832)
.. +| ...+||.-|+.|+++. +..|.... ...+..| .+.+...+..+... .++...+..
T Consensus 823 ~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~ 902 (1050)
T TIGR02468 823 KSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDE 902 (1050)
T ss_pred HhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecCh
Confidence 65 43 4569999999998862 12222110 0112346 23355454444321 133333333
Q ss_pred c----eeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEE-EE-cCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcce
Q 045882 693 E----TALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVV-KR-GYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDF 766 (832)
Q Consensus 693 ~----~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v-~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~ 766 (832)
. +++.+... |++.. ...+++.+.|... ...+.+ ++ +..+++|.|..+|||.|+++|+.++ |++.++
T Consensus 903 ~~q~~~k~SY~v~--d~~~~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~ 974 (1050)
T TIGR02468 903 ESSTDHCYAFKVK--DPSKV-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELAN 974 (1050)
T ss_pred hhCCCceEEEEec--CcccC-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHH
Confidence 2 33443322 22221 1245555555431 233433 34 4589999999999999999999999 999999
Q ss_pred EEE-EeCChh-h-HHHHHHc
Q 045882 767 VLC-VGDDRS-D-EDMFESI 783 (832)
Q Consensus 767 vl~-~GDd~N-D-~~Mf~~a 783 (832)
+++ +||+.| | ++|+.-.
T Consensus 975 v~VfaGdSGntD~e~Ll~G~ 994 (1050)
T TIGR02468 975 MAVFVGESGDTDYEGLLGGL 994 (1050)
T ss_pred eEEEeccCCCCCHHHHhCCc
Confidence 955 999999 9 5565443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=308.75 Aligned_cols=247 Identities=29% Similarity=0.483 Sum_probs=214.0
Q ss_pred CHHHHHHHhhccCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEE
Q 045882 566 SVDRIVDAYKRTSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIA 643 (832)
Q Consensus 566 ~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~li 643 (832)
..+.+.+.|.++++++||+||||||++... ....|+++++++|++|++++++.|+|+|||+...+..|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 445677889999999999999999998432 4567899999999999999999999999999999999998 8899999
Q ss_pred EeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHh
Q 045882 644 AEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVL 723 (832)
Q Consensus 644 aenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l 723 (832)
|+||++++...++.|+...+..+..|++.+..+++++++++||+++|.|++++.|||++++++....++...... .
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~----~ 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAAT----L 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHh----c
Confidence 999999999888889988888888999999999999999999999999999999999999776544333222222 1
Q ss_pred cCCC-EEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEE
Q 045882 724 ANEP-VVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACT 802 (832)
Q Consensus 724 ~~~~-~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~ 802 (832)
.+.. +.+..|+.+||++|.++|||.+++++++.. +...++++|.|||.+||+||+++.... .+++.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 2233 889999999999999999999999999987 444478999999999999999998642 26899
Q ss_pred eCCcccccceEeCChhHHHHHHHHhhhh
Q 045882 803 VGQKPSKARYYLDDEEDVLALLKGLAAA 830 (832)
Q Consensus 803 vG~~~s~A~y~l~~~~eV~~~L~~l~~~ 830 (832)
+|.+.+.|++.+.....+...|.++...
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~ 254 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEA 254 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHH
Confidence 9999999999999999888888887653
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=311.18 Aligned_cols=226 Identities=41% Similarity=0.684 Sum_probs=155.7
Q ss_pred EEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEE
Q 045882 583 FLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWET 660 (832)
Q Consensus 583 ~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~ 660 (832)
||||||||.+..+ ....|++++.++|++||+++++.|+|+|||+... .+.+..+++++++|+||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~-~~~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDD-LERFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHH-HHHH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH-hHHhcCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999554 3457889999999999999999999999999999 555556789999999999999998888887
Q ss_pred cCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC-CEEEEEcCeEEEE
Q 045882 661 STVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE-PVVVKRGYNIVEV 739 (832)
Q Consensus 661 ~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~-~~~v~~g~~~vEV 739 (832)
.....+..|++.+.++++++.+++||+++|.|+++++|||++++++++..+++++.+++.+.+... ++.+..|+++|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 666677889999999999999999999999999999999999999999889999999999877765 8999999999999
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC-----CcccccceEe
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG-----QKPSKARYYL 814 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG-----~~~s~A~y~l 814 (832)
+|.+++||.|++.|++.+...+..+++++|+|||.+||+||+++.... ...+++.|| .++|.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999988332334899999999999999999998641 011455555 4689999999
Q ss_pred CCh
Q 045882 815 DDE 817 (832)
Q Consensus 815 ~~~ 817 (832)
+|+
T Consensus 232 ~~p 234 (235)
T PF02358_consen 232 DDP 234 (235)
T ss_dssp ---
T ss_pred ccC
Confidence 886
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=307.46 Aligned_cols=246 Identities=26% Similarity=0.337 Sum_probs=197.0
Q ss_pred HHHHHHhhccCcEEEEEecCCCcCCCCC-CCC-CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEe
Q 045882 568 DRIVDAYKRTSRRAIFLDYDGTVVPHHA-LIK-KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAE 645 (832)
Q Consensus 568 ~~i~~~y~~s~~rlI~lD~DGTLl~~~~-~~~-~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liae 645 (832)
+.++ ++.+.++.+||+||||||++..+ .++ .+++++.++|++|+ +++.|+|+|||++..+.++++ +..++++++
T Consensus 101 ~~~~-~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~ 176 (366)
T PLN03017 101 EQIM-EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGS 176 (366)
T ss_pred HHHH-HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEc
Confidence 3443 44566889999999999996543 233 79999999999995 579999999999999999964 457899999
Q ss_pred CCEEEEeCCCccEEE------cCcccchhHHHHHHHH---HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHH
Q 045882 646 HGYYLRWTKKSEWET------STVAADFEWKRITEPV---MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELL 716 (832)
Q Consensus 646 nGa~i~~~~~~~w~~------~~~~~~~~w~~~v~~i---~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~ 716 (832)
||++++.+.+..+.. ........|...+.++ ++.+++++||+++|+|+++++||||++++. .+.++.
T Consensus 177 hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~ 252 (366)
T PLN03017 177 HGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELV 252 (366)
T ss_pred CCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHH
Confidence 999998765422110 0111234576767766 556677899999999999999999999764 356788
Q ss_pred HHHHHHhcCCC-EEEEEcCeEEEEEeC-CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCC
Q 045882 717 DHLESVLANEP-VVVKRGYNIVEVKPQ-GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPI 794 (832)
Q Consensus 717 ~~l~~~l~~~~-~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~ 794 (832)
.++...+.+++ +.+..|+.++||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+....
T Consensus 253 ~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~------- 325 (366)
T PLN03017 253 LQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRG------- 325 (366)
T ss_pred HHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcC-------
Confidence 88888888776 789999999999995 999999999999988222223568999999999999999996421
Q ss_pred CCcEEEEEeC--CcccccceEeCChhHHHHHHHHhhhh
Q 045882 795 APEIFACTVG--QKPSKARYYLDDEEDVLALLKGLAAA 830 (832)
Q Consensus 795 ~~~~f~v~vG--~~~s~A~y~l~~~~eV~~~L~~l~~~ 830 (832)
..|+|.|| .++|.|+|+|+++++|..+|+.|+.-
T Consensus 326 --~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~ 361 (366)
T PLN03017 326 --EGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEW 361 (366)
T ss_pred --CceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHH
Confidence 12899999 57999999999999999999999863
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=304.71 Aligned_cols=240 Identities=24% Similarity=0.368 Sum_probs=195.5
Q ss_pred hhccCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEE
Q 045882 574 YKRTSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLR 651 (832)
Q Consensus 574 y~~s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~ 651 (832)
..++++++||+||||||+|... ....++++++++|++|++ +..|+|+|||++..+.++++ ++.++++++||++++
T Consensus 93 ~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~ 169 (354)
T PLN02151 93 KSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIK 169 (354)
T ss_pred hhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceee
Confidence 3567889999999999997543 344789999999999973 57999999999999999997 567999999999998
Q ss_pred eCC-CccEEE----cCcccchhHHHHHHHHHHHHH---hcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHh
Q 045882 652 WTK-KSEWET----STVAADFEWKRITEPVMKLYT---EATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVL 723 (832)
Q Consensus 652 ~~~-~~~w~~----~~~~~~~~w~~~v~~i~~~~~---e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l 723 (832)
.++ +..|+. .......+|.+.+.++++.+. +++||+++|+|.++++||||+++++ ++.++.+++.+++
T Consensus 170 ~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~ 245 (354)
T PLN02151 170 GPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVL 245 (354)
T ss_pred cCCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHH
Confidence 764 335531 111234578888888777664 7899999999999999999999765 3456778888888
Q ss_pred cCCC-EEEEEcCeEEEEEeC-CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEE
Q 045882 724 ANEP-VVVKRGYNIVEVKPQ-GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFAC 801 (832)
Q Consensus 724 ~~~~-~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v 801 (832)
.+++ +.+..|+.++||+|. ++|||.|+++|++.+...+...++++|+|||.+||+||+++..... .+++
T Consensus 246 ~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~---------G~gI 316 (354)
T PLN02151 246 KNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQ---------GLGI 316 (354)
T ss_pred hhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCC---------CccE
Confidence 7776 789999999999996 9999999999999873222345689999999999999999864211 1577
Q ss_pred EeC--CcccccceEeCChhHHHHHHHHhhh
Q 045882 802 TVG--QKPSKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 802 ~vG--~~~s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
.|| .++|.|+|+|+++++|..+|+.|+.
T Consensus 317 ~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 317 LVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred EeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 777 6899999999999999999999986
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=297.35 Aligned_cols=237 Identities=28% Similarity=0.426 Sum_probs=196.3
Q ss_pred cCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCC
Q 045882 577 TSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTK 654 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~ 654 (832)
+|+++|+|||||||++..+ ....+++++.++|++|++++++.|+|+|||+...+...+ .+++++++++||++++..+
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 5789999999999998532 345678999999999999999999999999988877655 3567899999999998743
Q ss_pred Cc-cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccC-CCCCCchhHHHHHHHHHHHhcCCCEEEEE
Q 045882 655 KS-EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDA-APGFGSCQAKELLDHLESVLANEPVVVKR 732 (832)
Q Consensus 655 ~~-~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~a-d~~~~~~~a~el~~~l~~~l~~~~~~v~~ 732 (832)
.. .|... +.....|++.+.++++++.++ ||+++|+|+++++|||+.+ |++.+..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 32 35442 222247888899999999887 9999999999999999998 77777666666666553 344788899
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEe--CCccccc
Q 045882 733 GYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTV--GQKPSKA 810 (832)
Q Consensus 733 g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v--G~~~s~A 810 (832)
|+.++|++|.++|||.+++.+++.+ ++.++++++|||+.||++||+.+.... .....+++.| |.+++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999998 888899999999999999999993210 1112378888 8889999
Q ss_pred ceEeCChhHHHHHHHHhh
Q 045882 811 RYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 811 ~y~l~~~~eV~~~L~~l~ 828 (832)
+|+++++++|..+|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=306.79 Aligned_cols=238 Identities=24% Similarity=0.354 Sum_probs=188.6
Q ss_pred HHhhccCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEE
Q 045882 572 DAYKRTSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYY 649 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~ 649 (832)
.+|.+++++++||||||||.+... ....++++++++|++|+++ ..|+|+|||++..+.++++. +.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 478999999999999999998543 4556899999999999765 47999999999999999974 469999999999
Q ss_pred EEeCCC----ccEEEc-------------CcccchhHHHHHHHHHHH---HHhcCCceEEeecceeEEEEeccCCCCCCc
Q 045882 650 LRWTKK----SEWETS-------------TVAADFEWKRITEPVMKL---YTEATDGSYIEKKETALVWHYQDAAPGFGS 709 (832)
Q Consensus 650 i~~~~~----~~w~~~-------------~~~~~~~w~~~v~~i~~~---~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~ 709 (832)
++.+.+ ..|..+ .. ...+|.+.+.++++. +++++||+++|+|+++++||||++++++..
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~-~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~ 267 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQ-PASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWP 267 (384)
T ss_pred eecCCCCcccccccccccccccccccccccc-cchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHH
Confidence 986421 112211 11 134677666666665 556779999999999999999999877643
Q ss_pred hhHHHHHHHHHHHhcCCC-EEEEEcCeEEEEEe-CCCCHHHHHHHHHHhhhhCCCCcc-e--EEEEeCChhhHHHHHHcc
Q 045882 710 CQAKELLDHLESVLANEP-VVVKRGYNIVEVKP-QGVTKGLVAEKVLSTMISDGKLPD-F--VLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 710 ~~a~el~~~l~~~l~~~~-~~v~~g~~~vEV~p-~gvnKG~al~~Ll~~l~~~gi~~d-~--vl~~GDd~ND~~Mf~~a~ 784 (832)
. +.+.+...+.+++ +.+..|+.++||+| .++|||.|+++|++++ |+..+ + ++|||||.|||+||+.+.
T Consensus 268 ~----~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~ 340 (384)
T PLN02580 268 L----VAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLR 340 (384)
T ss_pred H----HHHHHHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhh
Confidence 3 3444444455555 78899999999999 5999999999999998 77644 3 599999999999999975
Q ss_pred cccCCCCCCCCCcEEEEEeC--CcccccceEeCChhHHHHHHHHhhh
Q 045882 785 QATYGSSLPIAPEIFACTVG--QKPSKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 785 ~~~~~~~~~~~~~~f~v~vG--~~~s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
.... .++|.|| .+.|.|+|+|+++++|..+|+.|+.
T Consensus 341 ~~~~---------G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 341 EGNR---------GYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred ccCC---------ceEEEEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence 4211 1556555 5789999999999999999999986
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=297.54 Aligned_cols=230 Identities=23% Similarity=0.277 Sum_probs=187.4
Q ss_pred CcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCC
Q 045882 578 SRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~ 655 (832)
++++|++||||||++..+ ....++++++++|++|++++|+.|+|+|||+...+.++++.+ .++++++||++++..++
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~ 91 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING 91 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC
Confidence 468999999999998432 356789999999999976689999999999999999999876 47799999999987655
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHH-HHhcCCC-EEEEEc
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLE-SVLANEP-VVVKRG 733 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~-~~l~~~~-~~v~~g 733 (832)
..+... .+.+|.+.+...++.+.+++||+++|.|+.+++|||+.++ +. .+...++. .+.+..+ +.+.+|
T Consensus 92 ~~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~~-----~~~~~~l~~~i~~~~~~~~~~~g 162 (266)
T PRK10187 92 KTHIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-QH-----EDALLALAQRITQIWPQLALQPG 162 (266)
T ss_pred Ceeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-cc-----HHHHHHHHHHHHhhCCceEEeCC
Confidence 433322 2345556666667777888999999999999999998773 21 23333333 2222333 667789
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceE
Q 045882 734 YNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYY 813 (832)
Q Consensus 734 ~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~ 813 (832)
+.++||+|+++|||.|++++++++ |+..++++||||+.||++||+++.... .++|+||++++.|+|+
T Consensus 163 ~~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~~----------g~~vavg~a~~~A~~~ 229 (266)
T PRK10187 163 KCVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRLG----------GISVKVGTGATQASWR 229 (266)
T ss_pred CEEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhcC----------CeEEEECCCCCcCeEe
Confidence 999999999999999999999999 999999999999999999999994321 1799999999999999
Q ss_pred eCChhHHHHHHHHhhhh
Q 045882 814 LDDEEDVLALLKGLAAA 830 (832)
Q Consensus 814 l~~~~eV~~~L~~l~~~ 830 (832)
++++++|..+|+.|++.
T Consensus 230 l~~~~~v~~~L~~l~~~ 246 (266)
T PRK10187 230 LAGVPDVWSWLEMITTA 246 (266)
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 99999999999999864
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=246.27 Aligned_cols=225 Identities=18% Similarity=0.218 Sum_probs=159.7
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCc-eEEEeCCEEEEeCCCc
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENL-GIAAEHGYYLRWTKKS 656 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l-~liaenGa~i~~~~~~ 656 (832)
..|+|++|+||||++ .++.+++++.++|+++ +++|+.|+|+|||+...+.+.+..+... ++|++||+++++.++.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 579999999999999 6777999999999999 7899999999999999999999988643 7999999999998544
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhc--CCceEEeecceeEEE-----------------EeccCC--CC---CC----
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEA--TDGSYIEKKETALVW-----------------HYQDAA--PG---FG---- 708 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~--~~gs~ie~k~~~l~~-----------------~~~~ad--~~---~~---- 708 (832)
.+...++ .+.+..+++...+. .+..+.......... .....+ .+ +.
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred EeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 4444443 45566666665332 111221111100000 000000 00 00
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEEcCe-EEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccccc
Q 045882 709 SCQAKELLDHLESVLANEPVVVKRGYN-IVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQAT 787 (832)
Q Consensus 709 ~~~a~el~~~l~~~l~~~~~~v~~g~~-~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~ 787 (832)
.....++...+.+.+......+.++.. .+||+|+|+|||.|+++|++++ |+++++|+||||+.||++||+.++.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~-- 226 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL-- 226 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCe--
Confidence 011223333444444333455555554 4999999999999999999999 9999999999999999999999985
Q ss_pred CCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHHHHhhh
Q 045882 788 YGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALLKGLAA 829 (832)
Q Consensus 788 ~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L~~l~~ 829 (832)
+|+||++ +..|++++ ++.++|.+.|+++..
T Consensus 227 ------------gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 227 ------------GVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred ------------eeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 5666764 57788665 467889999998753
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-26 Score=243.77 Aligned_cols=223 Identities=16% Similarity=0.204 Sum_probs=153.5
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC----ceEEEeCCEEEEeC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN----LGIAAEHGYYLRWT 653 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~----l~liaenGa~i~~~ 653 (832)
+.|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+.+++. .++|+.||+.|+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 468999999999998 6778999999999999 689999999999999999998887652 36999999999864
Q ss_pred --CCccEEEcCcccchhHHHHHHHHHHHHHhcC--------CceEEeeccee-----------EEEEecc---CCCC--C
Q 045882 654 --KKSEWETSTVAADFEWKRITEPVMKLYTEAT--------DGSYIEKKETA-----------LVWHYQD---AAPG--F 707 (832)
Q Consensus 654 --~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~--------~gs~ie~k~~~-----------l~~~~~~---ad~~--~ 707 (832)
+...+...++. +.+..+++...+.. .+.+...+... +...+.. .++. .
T Consensus 78 ~~~~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (270)
T PRK10513 78 ADGETVAQTALSY------DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQF 151 (270)
T ss_pred CCCCEEEecCCCH------HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCc
Confidence 23345444442 33444444432211 11222111100 0000000 0000 0
Q ss_pred ------C-chhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHH
Q 045882 708 ------G-SCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDM 779 (832)
Q Consensus 708 ------~-~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~M 779 (832)
. .....++...+...+.. .+. +.+++.++||.|+++|||+|+++|++++ |+++++++||||+.||++|
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~M 227 (270)
T PRK10513 152 PKVMMIDEPEILDAAIARIPAEVKE-RYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAM 227 (270)
T ss_pred eEEEEeCCHHHHHHHHHHhHHHhcC-cEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHH
Confidence 0 00112222333332222 233 4567789999999999999999999999 9999999999999999999
Q ss_pred HHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeC--ChhHHHHHHHHhh
Q 045882 780 FESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLD--DEEDVLALLKGLA 828 (832)
Q Consensus 780 f~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 828 (832)
|+.++. +++||++ +..|+|++. +.++|.++|+++.
T Consensus 228 l~~ag~--------------~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 228 IEYAGV--------------GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHhCCc--------------eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 999986 4556653 678999884 5788999998874
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=246.50 Aligned_cols=223 Identities=17% Similarity=0.213 Sum_probs=154.0
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCc-
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKS- 656 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~- 656 (832)
.|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||+...+.+.+..++ ..++|+.||+.|++..+.
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 58999999999998 6778999999999999 68999999999999999999988875 357899999999964333
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhcC--------CceEEeecce---------eEEEEecc---CC-CCC------C-
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEAT--------DGSYIEKKET---------ALVWHYQD---AA-PGF------G- 708 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~~--------~gs~ie~k~~---------~l~~~~~~---ad-~~~------~- 708 (832)
.+...++ .+.+..+++...+.. .+.+...... ...+...+ .. ... .
T Consensus 78 l~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 151 (272)
T PRK15126 78 LHRQDLP------ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGD 151 (272)
T ss_pred EEeecCC------HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECC
Confidence 4444443 345555555443211 1111110000 00000000 00 000 0
Q ss_pred chhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccccc
Q 045882 709 SCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQAT 787 (832)
Q Consensus 709 ~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~ 787 (832)
.....++...+.+.+.. .+. +.++..++||.|+++|||+|+++|++++ |+++++++||||+.||++||+.++.
T Consensus 152 ~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~-- 225 (272)
T PRK15126 152 HDDLTRLQIQLNEALGE-RAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR-- 225 (272)
T ss_pred HHHHHHHHHHHHHHhcC-CEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC--
Confidence 01122333344433322 233 3466789999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCCCCcEEEEEeCCc----ccccce--Ee--CChhHHHHHHHHhhh
Q 045882 788 YGSSLPIAPEIFACTVGQK----PSKARY--YL--DDEEDVLALLKGLAA 829 (832)
Q Consensus 788 ~~~~~~~~~~~f~v~vG~~----~s~A~y--~l--~~~~eV~~~L~~l~~ 829 (832)
+++||++ +..|+| ++ ++.++|.++|+++..
T Consensus 226 ------------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 ------------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred ------------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 4556653 566776 55 467889999998764
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=245.37 Aligned_cols=223 Identities=16% Similarity=0.172 Sum_probs=151.8
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCc-
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKS- 656 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~- 656 (832)
.|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+..++ ..++|+.||+.++..++.
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 58999999999998 6778999999999999 68999999999999999999888876 346899999999874332
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhcCCce--EEeecceeE-----------------EEEec---cCCC-CCC-----
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEATDGS--YIEKKETAL-----------------VWHYQ---DAAP-GFG----- 708 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs--~ie~k~~~l-----------------~~~~~---~ad~-~~~----- 708 (832)
.+...++ .+.+.++++...+. ++. .+...+..+ .+... ...+ ...
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~ 150 (266)
T PRK10976 78 IFSHNLD------RDIASDLFGVVHDN-PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFT 150 (266)
T ss_pred ehhhcCC------HHHHHHHHHhhccc-CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEE
Confidence 3333333 34566666554321 111 111111000 00000 0000 000
Q ss_pred ---chhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcc
Q 045882 709 ---SCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 709 ---~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
.....++.+.+.+.+.. .+. +.++..++||.|+++|||.|+++|++++ |+++++|+||||+.||++||+.++
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag 226 (266)
T PRK10976 151 CDSHEKLLPLEQAINARWGD-RVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAG 226 (266)
T ss_pred cCCHHHHHHHHHHHHHHhCC-cEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcC
Confidence 00111223333333322 233 3567789999999999999999999999 999999999999999999999999
Q ss_pred cccCCCCCCCCCcEEEEEeCCc--ccccc--eEe--CChhHHHHHHHHhh
Q 045882 785 QATYGSSLPIAPEIFACTVGQK--PSKAR--YYL--DDEEDVLALLKGLA 828 (832)
Q Consensus 785 ~~~~~~~~~~~~~~f~v~vG~~--~s~A~--y~l--~~~~eV~~~L~~l~ 828 (832)
.+ |+|.++.. +..|+ +++ ++.++|.++|+++.
T Consensus 227 ~~------------vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 227 KG------------CIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred CC------------eeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 64 44444432 56666 665 46788999999875
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-25 Score=236.63 Aligned_cols=226 Identities=15% Similarity=0.099 Sum_probs=152.4
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC--ceEEEeCCEEEEeCCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN--LGIAAEHGYYLRWTKK 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~--l~liaenGa~i~~~~~ 655 (832)
.+|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||+...+.+.+..++. .++|++||+.|+...+
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 579999999999998 5677889999999999 789999999999999999999888753 4699999999997643
Q ss_pred c-------cEEEcCcccchhHHHHHHHHHHHHHhcCCceE-Eeecce-----eEEEEe------ccCCCC---CCchhHH
Q 045882 656 S-------EWETSTVAADFEWKRITEPVMKLYTEATDGSY-IEKKET-----ALVWHY------QDAAPG---FGSCQAK 713 (832)
Q Consensus 656 ~-------~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~-ie~k~~-----~l~~~~------~~ad~~---~~~~~a~ 713 (832)
. .+...++ .+.+..+++.+.+...-.+ ...... .....+ ...... +......
T Consensus 82 ~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGIS------HGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCCC------HHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 1222222 3455566655433211000 000000 000000 000000 0000001
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCC---CcceEEEEeCChhhHHHHHHcccccCCC
Q 045882 714 ELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGK---LPDFVLCVGDDRSDEDMFESISQATYGS 790 (832)
Q Consensus 714 el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi---~~d~vl~~GDd~ND~~Mf~~a~~~~~~~ 790 (832)
+....+.+.+....+.+..+..++||+|+++|||+|+++|++++ |+ ++++|+||||+.||++||+.++.
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~----- 227 (271)
T PRK03669 156 ERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY----- 227 (271)
T ss_pred HHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE-----
Confidence 12222333332224555556679999999999999999999999 99 99999999999999999999984
Q ss_pred CCCCCCcEEEEEeCCc----------ccccceEeC--ChhHHHHHHHHhhhh
Q 045882 791 SLPIAPEIFACTVGQK----------PSKARYYLD--DEEDVLALLKGLAAA 830 (832)
Q Consensus 791 ~~~~~~~~f~v~vG~~----------~s~A~y~l~--~~~eV~~~L~~l~~~ 830 (832)
+|+||+. +..|.|+++ +.+++.+.|+.+..+
T Consensus 228 ---------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 ---------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred ---------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 6677632 225778886 567999999988754
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=228.15 Aligned_cols=212 Identities=19% Similarity=0.179 Sum_probs=148.5
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCC--C
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTK--K 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~--~ 655 (832)
.|+|++|+||||++ .++.+++++.++|++| +++|+.|+|+|||+...+.+.+..++ ..++|++||+.++... .
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (230)
T PRK01158 3 IKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGK 78 (230)
T ss_pred eeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCC
Confidence 58999999999998 6778999999999999 68999999999999999998887775 3579999999998763 2
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhcCCceE--Eeec--ceeE--EEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEATDGSY--IEKK--ETAL--VWHYQDAAPGFGSCQAKELLDHLESVLANEPVV 729 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~--ie~k--~~~l--~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~ 729 (832)
..+....+ .+..+++.+.+..+... +... .... ...+. . ....++.+.++.. ...+.
T Consensus 79 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~l~~~--~~~~~ 141 (230)
T PRK01158 79 RIFLGDIE--------ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRR----T---VPVEEVRELLEEL--GLDLE 141 (230)
T ss_pred EEEEcchH--------HHHHHHHHHHHhccccceeeecCCcccccceeeecc----c---ccHHHHHHHHHHc--CCcEE
Confidence 23333221 22333333322222111 1100 0000 00011 0 0112233333321 12345
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---
Q 045882 730 VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--- 806 (832)
Q Consensus 730 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--- 806 (832)
+..+..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++. +++||++
T Consensus 142 ~~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~ 204 (230)
T PRK01158 142 IVDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGF--------------GVAVANADEE 204 (230)
T ss_pred EEecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCc--------------eEEecCccHH
Confidence 5556678999999999999999999999 9999999999999999999999985 4566664
Q ss_pred -ccccceEeC--ChhHHHHHHHHhh
Q 045882 807 -PSKARYYLD--DEEDVLALLKGLA 828 (832)
Q Consensus 807 -~s~A~y~l~--~~~eV~~~L~~l~ 828 (832)
+..|+|++. +.++|.+.|+++.
T Consensus 205 vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 205 LKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHHhcceEecCCCcChHHHHHHHHh
Confidence 577999884 5678999998763
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-25 Score=252.92 Aligned_cols=231 Identities=18% Similarity=0.203 Sum_probs=157.9
Q ss_pred HHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC---c------
Q 045882 570 IVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN---L------ 640 (832)
Q Consensus 570 i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~---l------ 640 (832)
.+..|+ .+.|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+..++. .
T Consensus 300 ~~~~~~-~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~ 374 (580)
T PLN02887 300 SLRFYK-PKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISES 374 (580)
T ss_pred chhhhc-cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeec
Confidence 344554 4789999999999998 6788999999999999 789999999999999999988876541 2
Q ss_pred -eEEEeCCEEEEeCCCc-cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEE---------EE--ec--c---
Q 045882 641 -GIAAEHGYYLRWTKKS-EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALV---------WH--YQ--D--- 702 (832)
Q Consensus 641 -~liaenGa~i~~~~~~-~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~---------~~--~~--~--- 702 (832)
++|+.||+.|++..+. .+...++ .+.+..+++...+..-...+...+..+. ++ +. .
T Consensus 375 ~p~I~~NGA~I~d~~g~~I~~~~L~------~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~ 448 (580)
T PLN02887 375 SPGVFLQGLLVYGRQGREIYRSNLD------QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEI 448 (580)
T ss_pred ccEEeecCeEEEECCCcEEEEEeCC------HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccc
Confidence 4667799999864433 4554444 3556666665443211111111111000 00 00 0
Q ss_pred ---CC---C--CCC----chh----HHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcce
Q 045882 703 ---AA---P--GFG----SCQ----AKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDF 766 (832)
Q Consensus 703 ---ad---~--~~~----~~~----a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~ 766 (832)
.+ . ... ... ..++...+.+.+...-..+.++..++||+|+++|||.|+++|++++ |+++++
T Consensus 449 i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~ee 525 (580)
T PLN02887 449 MSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDE 525 (580)
T ss_pred cCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHH
Confidence 00 0 000 000 1122233333332222234567789999999999999999999999 999999
Q ss_pred EEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHHHHhh
Q 045882 767 VLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALLKGLA 828 (832)
Q Consensus 767 vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L~~l~ 828 (832)
|+||||+.||++||+.+|. +|+||++ +..|+|++ ++.++|.++|++++
T Consensus 526 viAFGDs~NDIeMLe~AG~--------------gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 526 IMAIGDGENDIEMLQLASL--------------GVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEEecchhhHHHHHHCCC--------------EEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 9999999999999999985 5666664 67899988 46788999998864
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=227.04 Aligned_cols=216 Identities=21% Similarity=0.290 Sum_probs=156.2
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc-EE
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE-WE 659 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~-w~ 659 (832)
||+|+||||++ .+..++++++++|++| +++|+.++++|||+...+.+++..++ ..++|+.||+.+....+.. +.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 6777999999999999 67899999999999999999999887 4699999999994444433 34
Q ss_pred EcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEE------------------EE-ec--cC--CCC-------CCc
Q 045882 660 TSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALV------------------WH-YQ--DA--APG-------FGS 709 (832)
Q Consensus 660 ~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~------------------~~-~~--~a--d~~-------~~~ 709 (832)
..++ .+.+..+++...+..-...+...+.... +. .. .. ... ...
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 4443 3556666666654321111111111000 00 00 00 000 001
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCC
Q 045882 710 CQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYG 789 (832)
Q Consensus 710 ~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~ 789 (832)
.+..++.+.+...+.+.-..+.+++.++||.|+++|||.|+++|++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~---- 223 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY---- 223 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE----
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe----
Confidence 234456666666665433556788999999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHH
Q 045882 790 SSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALL 824 (832)
Q Consensus 790 ~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L 824 (832)
+|+||++ +..|+|++.+ .++|++.|
T Consensus 224 ----------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ----------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ----------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ----------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 6777775 6789998853 36787765
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-25 Score=226.29 Aligned_cols=194 Identities=27% Similarity=0.358 Sum_probs=150.2
Q ss_pred EEEEecCCCcCCCCCCC-CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEE
Q 045882 581 AIFLDYDGTVVPHHALI-KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWE 659 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~-~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~ 659 (832)
+|++|+||||++ .+ ..+++++.++|++| .++|+.++|+|||+...+.+++..+ +.++|++||++++..++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 44 67999999999999 4678999999999999999999875 488999999999987666666
Q ss_pred EcCcccc-h---hHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcC-CCEEEE-Ec
Q 045882 660 TSTVAAD-F---EWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLAN-EPVVVK-RG 733 (832)
Q Consensus 660 ~~~~~~~-~---~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~-~~~~v~-~g 733 (832)
. +... . .|.+.+..++..+.+.+++..++.+...+.+++... +.......++...++....+ ..+.+. ++
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 151 (204)
T TIGR01484 76 E--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIYVG 151 (204)
T ss_pred c--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEEec
Confidence 4 1111 1 111233344445556678888888999999999864 11112233455555444222 346666 69
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 734 YNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 734 ~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+.++||+|++++||.+++.+++++ |++++++++|||+.||++||+.++.+
T Consensus 152 ~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 152 KTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred CCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 999999999999999999999999 89999999999999999999999864
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-24 Score=239.85 Aligned_cols=301 Identities=16% Similarity=0.129 Sum_probs=208.5
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHH
Q 045882 174 RLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALL 253 (832)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll 253 (832)
...+..|...++.++.++.+..+ .|+||+|+++.+.++...+. ..+++.+++|+++.... + .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~--~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLD--ADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCC--CCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 44678888888888765433334 49999999998877766543 36788899999875421 0 01122333455
Q ss_pred hCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--
Q 045882 254 NADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-- 331 (832)
Q Consensus 254 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 331 (832)
.+|.+.+.+.++++.++ ..+ .+ ++|+|||+...... +........+++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 67877766533221110 111 23 79999997532111 11123344555655
Q ss_pred -CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 332 -KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 332 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
.++++|++|||+++.||+..+++||+.+.+++|+++ |+++|.++.. .++..++.++ +.++.+. ..
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~---~~~~~~~------~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEE---VLEYAEG------DP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHH---HHHHhCC------CC
Confidence 478999999999999999999999999988888876 9989865421 1222232222 2222211 12
Q ss_pred cEEEecCC-CCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC
Q 045882 411 PVILIDRP-VPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS 489 (832)
Q Consensus 411 pv~~~~~~-v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~ 489 (832)
.|.+++.. ++.+++.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-------------------~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-------------------KPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-------------------CCEEEcCCCCchhhcc
Confidence 36666543 489999999999999999999999999999999994 4799999999888883
Q ss_pred ---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHH
Q 045882 490 ---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 490 ---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (832)
.|++++ +.+++|++|.+++++ +++++.+.++.++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~--~~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVD--TVEEAAVRILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeC--CcHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 377876 467899999999985 455666667777776 568999999988877654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.5e-24 Score=226.69 Aligned_cols=224 Identities=17% Similarity=0.205 Sum_probs=152.6
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCC-C
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTK-K 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~-~ 655 (832)
+.|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+..++ ..++|+.||+.++... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 2 TYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred CccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 368999999999998 6778999999999999 68899999999999999999988876 3469999999999743 3
Q ss_pred c-cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeE------------EEE----------eccCCC-------
Q 045882 656 S-EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETAL------------VWH----------YQDAAP------- 705 (832)
Q Consensus 656 ~-~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l------------~~~----------~~~ad~------- 705 (832)
. .+...++ .+.+..+++...+..-...+...+..+ .|. +...+.
T Consensus 78 ~~l~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T PRK10530 78 KVLEADPLP------VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQ 151 (272)
T ss_pred EEEEecCCC------HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhh
Confidence 3 2333333 345666666554321111111100000 000 000000
Q ss_pred -C--CCc---h-hHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhH
Q 045882 706 -G--FGS---C-QAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDE 777 (832)
Q Consensus 706 -~--~~~---~-~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~ 777 (832)
. ... . ...++....+.+.....+. +.++..++||.|+++|||.|++++++++ |++++++++|||+.||+
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~NDi 228 (272)
T PRK10530 152 VNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFNDI 228 (272)
T ss_pred cCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChhhH
Confidence 0 000 0 0011112222222223333 3345578999999999999999999999 99999999999999999
Q ss_pred HHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeC--ChhHHHHHHHHhh
Q 045882 778 DMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLD--DEEDVLALLKGLA 828 (832)
Q Consensus 778 ~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 828 (832)
+||+.++. +|+||++ +..|+|+++ +.++|.++|+++.
T Consensus 229 ~m~~~ag~--------------~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 229 SMLEAAGL--------------GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred HHHHhcCc--------------eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 99999985 5666664 567899884 5778999998764
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=222.69 Aligned_cols=216 Identities=19% Similarity=0.234 Sum_probs=148.5
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC-ceEEEeCCEEEEeCC-CccE
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN-LGIAAEHGYYLRWTK-KSEW 658 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~-l~liaenGa~i~~~~-~~~w 658 (832)
+|++|+||||++ .++.+++++.++|++| +++|+.|+|+|||+...+.+.+..++. .++|+.||+.++..+ ...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 6778999999999999 678999999999999999999988763 489999999999764 3345
Q ss_pred EEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEE-------------Eecc---C-C-----CC-CC-------
Q 045882 659 ETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVW-------------HYQD---A-A-----PG-FG------- 708 (832)
Q Consensus 659 ~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~-------------~~~~---a-d-----~~-~~------- 708 (832)
...++ .+.+..+++.+.+..-...+...+..... .+.. . + .+ ..
T Consensus 77 ~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLD------LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCC------HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 44444 35566666655443211111111110000 0000 0 0 00 00
Q ss_pred chhHHHHHHHHHH-HhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 709 SCQAKELLDHLES-VLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 709 ~~~a~el~~~l~~-~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
.....++...+.+ .+. ..+. +.++..++||.|+++|||.|++.+++.+ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELE-ENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhc-CCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc-
Confidence 0011223333321 111 2233 4577889999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCCCcEEEEEeCCc----ccccceEeC--ChhHHHHHH
Q 045882 787 TYGSSLPIAPEIFACTVGQK----PSKARYYLD--DEEDVLALL 824 (832)
Q Consensus 787 ~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L 824 (832)
+++||++ +..|+|++. +.++|.++|
T Consensus 226 -------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 226 -------------GVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred -------------eeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 4566653 567889885 456777653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-23 Score=236.74 Aligned_cols=294 Identities=17% Similarity=0.191 Sum_probs=194.4
Q ss_pred CCEEEEeCcccccHHHHHHhhc----CCCeEEEEecCCCCC----hhhhhcC--Cc-------------hHHHHHHHHhC
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRF----HRVKLGFFLHSPFPS----SEIYRTL--PV-------------RNEILKALLNA 255 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~----~~~~ig~flH~PfP~----~e~~r~l--p~-------------r~~il~~ll~~ 255 (832)
.|+|++||+|..++|.+++++. .++++.++.|..-.. .+.+..+ |. ..-+-.++..|
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYA 198 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhc
Confidence 3999999999999999998663 468999999975211 1111111 10 11122356667
Q ss_pred CEEeecChhhHHHHHHHHHHHhCCcccccCceeeEE--EcCeEEEEEEeecCCCchHHHhhcCC-----------CChHH
Q 045882 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLE--YFGRTIYVKILHVGIHMGRLESALNH-----------PSSSI 322 (832)
Q Consensus 256 dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~i~P~GId~~~~~~~~~~-----------~~~~~ 322 (832)
|.|.--++.|++..... ..|. ++. +..+..++.++|+|||++.|.+.... .....
T Consensus 199 d~vitvS~~~~~ei~~~---~~~~---------gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~ 266 (466)
T PRK00654 199 DRVTTVSPTYAREITTP---EFGY---------GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAE 266 (466)
T ss_pred CcCeeeCHHHHHHhccc---cCCc---------ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHH
Confidence 76666666555543210 0000 000 01123468889999999988653110 01122
Q ss_pred HHHHHHHHcC----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHH
Q 045882 323 KVKEIREQFK----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITK 398 (832)
Q Consensus 323 ~~~~l~~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~ 398 (832)
..+.++++++ +.++|++|||+++.||+..+++|+++++++ +. .|+++|.+. + .++++++++++
T Consensus 267 ~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~----~lvivG~g~----~---~~~~~l~~l~~ 333 (466)
T PRK00654 267 NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GG----QLVLLGTGD----P---ELEEAFRALAA 333 (466)
T ss_pred HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--CC----EEEEEecCc----H---HHHHHHHHHHH
Confidence 2345666662 568999999999999999999999998764 33 488787431 1 24456666665
Q ss_pred HHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEe
Q 045882 399 RINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVI 478 (832)
Q Consensus 399 ~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (832)
+.+. .+.++.+. +.+....+|++||+||+||.+||||++.+|||+| +.|+|+
T Consensus 334 ~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-------------------G~p~V~ 385 (466)
T PRK00654 334 RYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-------------------GTLPIV 385 (466)
T ss_pred HCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-------------------CCCEEE
Confidence 5431 24444443 5566779999999999999999999999999999 457899
Q ss_pred ccCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 479 SEFIGCSPSL-S--------GAIRVNPWDIDAVADALHDAITM--SDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 479 Se~~G~s~~l-~--------~a~~VnP~d~~~~A~ai~~aL~m--~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
|..+|+.+.+ + +|++|+|.|+++++++|.++++. .++.++...++.. ...+++..-++++++-.+++
T Consensus 386 ~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 386 RRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred eCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9999999988 3 38999999999999999999863 2222222222222 24677777777776655543
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-22 Score=239.42 Aligned_cols=317 Identities=15% Similarity=0.139 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhh-----cCCCeEEEEecCC-----CCChhhhh-cCCc--
Q 045882 179 AYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRR-----FHRVKLGFFLHSP-----FPSSEIYR-TLPV-- 244 (832)
Q Consensus 179 ~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~-----~~~~~ig~flH~P-----fP~~e~~r-~lp~-- 244 (832)
-|.-+.+..++.+... .+| |||++||+|..++|.++.+. +.++++.|++|-- ||...+.. -+|+
T Consensus 592 RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 592 RFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 3444444444444332 345 89999999999985554432 4568999999953 22211111 1221
Q ss_pred -------------hHHHH-HHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchH
Q 045882 245 -------------RNEIL-KALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGR 310 (832)
Q Consensus 245 -------------r~~il-~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~ 310 (832)
+-.++ -|+..||.|-.-++.|++.-++ ..--|++. .+..+..++.++|+|||++.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~e~ 738 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDTDT 738 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceehhh
Confidence 11223 3577789988888888887654 11011110 12234457788999999999
Q ss_pred HHhhcCC-------C----ChHHHHHHHHHHcC------CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEE
Q 045882 311 LESALNH-------P----SSSIKVKEIREQFK------GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLV 373 (832)
Q Consensus 311 ~~~~~~~-------~----~~~~~~~~l~~~~~------~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 373 (832)
|.+.... . ........++++++ +.++|++|||+++.||+..++.|+.++++ ++. .||
T Consensus 739 wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dv----qLV 812 (977)
T PLN02939 739 WNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGG----QFV 812 (977)
T ss_pred cCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCC----EEE
Confidence 8753210 0 01122445777772 35899999999999999999999998875 333 488
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeee
Q 045882 374 QIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTIC 453 (832)
Q Consensus 374 qi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 453 (832)
++|.+ ++ ..+++++.+++.+.+.. ..|.++ +.++......+|++||+||+||.+|||||+++|||+|
T Consensus 813 IvGdG-----p~-~~~e~eL~~La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAy 879 (977)
T PLN02939 813 LLGSS-----PV-PHIQREFEGIADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRY 879 (977)
T ss_pred EEeCC-----Cc-HHHHHHHHHHHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHC
Confidence 88743 22 13456666666665321 125554 4567777789999999999999999999999999999
Q ss_pred ecCCCCchhhhhhhcCCCCCceEEeccCccccccCC------------CceEeCCCCHHHHHHHHHHHhcC---CHHHHH
Q 045882 454 RQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS------------GAIRVNPWDIDAVADALHDAITM---SDVEKQ 518 (832)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~------------~a~~VnP~d~~~~A~ai~~aL~m---~~~e~~ 518 (832)
+.|+|++..+|+.+.+. +|++++|.|+++++++|.+++.. .++.++
T Consensus 880 -------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~ 940 (977)
T PLN02939 880 -------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWK 940 (977)
T ss_pred -------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHH
Confidence 44789999999987662 48999999999999999999862 334333
Q ss_pred HHHHHHHhhhhcCCHHHHHHHHHHHHHHHH
Q 045882 519 LRHEKHYRYICSHDVAYWAHSFMQDLERAC 548 (832)
Q Consensus 519 ~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 548 (832)
...++. ....+++...++.+++-..++.
T Consensus 941 ~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 941 QLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 333222 2356888888888876665543
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-22 Score=242.86 Aligned_cols=307 Identities=14% Similarity=0.104 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhh-----cCCCeEEEEecCCCCChhhhhcCCchHHHHH
Q 045882 177 WRAYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRR-----FHRVKLGFFLHSPFPSSEIYRTLPVRNEILK 250 (832)
Q Consensus 177 w~~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~-----~~~~~ig~flH~PfP~~e~~r~lp~r~~il~ 250 (832)
..-|..+++..++.+... .+| |||++||+|..++|.++++. +.++++.+++|-.- | .+..+-.
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~lk~ 757 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHIGK 757 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHHHH
Confidence 344555555555544332 245 99999999999999999875 35689999999431 1 1122446
Q ss_pred HHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcC--CC-----C----
Q 045882 251 ALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALN--HP-----S---- 319 (832)
Q Consensus 251 ~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~--~~-----~---- 319 (832)
++..||.|.--++.|++..+.. ..+ ..+..++.++|+|||++.|.+... .| +
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~----~~l-------------~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~ 820 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN----SAI-------------APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVE 820 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc----cCc-------------ccccCCEEEEECCccccccCCcccccccccCCchhhhh
Confidence 7888999998888888766531 000 112346778999999998764311 01 0
Q ss_pred -hHHHHHHHHHHcC----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHH
Q 045882 320 -SSIKVKEIREQFK----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETY 394 (832)
Q Consensus 320 -~~~~~~~l~~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~ 394 (832)
.......++++++ +.++|++|+||++.||+..++.|+.++++. + +.||++|.+ ++ ..++.++.
T Consensus 821 gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~G-----pd-~~~e~~l~ 888 (1036)
T PLN02316 821 GKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSA-----PD-PRIQNDFV 888 (1036)
T ss_pred hhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCC-----CC-HHHHHHHH
Confidence 0122445677762 578999999999999999999999999863 3 337777743 33 24567778
Q ss_pred HHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCc
Q 045882 395 TITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTS 474 (832)
Q Consensus 395 ~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g 474 (832)
+++.+++..+.. .|.+.. ..+......+|++||+||+||..|||||+.+|||+| +.
T Consensus 889 ~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-------------------Gt 944 (1036)
T PLN02316 889 NLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-------------------GS 944 (1036)
T ss_pred HHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-------------------CC
Confidence 888877654421 254443 344433348999999999999999999999999999 34
Q ss_pred eEEeccCccccccC-C---------------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHH
Q 045882 475 MLVISEFIGCSPSL-S---------------GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWA 537 (832)
Q Consensus 475 ~lV~Se~~G~s~~l-~---------------~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~ 537 (832)
|+|++..+|..+.+ + +|++|+|.|++++++||.+||......+....+..++.+ ..+++..-+
T Consensus 945 ppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A 1024 (1036)
T PLN02316 945 IPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPA 1024 (1036)
T ss_pred CeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 78999999999987 2 489999999999999999999864332333233334443 457888888
Q ss_pred HHHHHHHHHH
Q 045882 538 HSFMQDLERA 547 (832)
Q Consensus 538 ~~~l~~l~~~ 547 (832)
+.+++-.+++
T Consensus 1025 ~~Y~~LY~~a 1034 (1036)
T PLN02316 1025 LDYMELYHSA 1034 (1036)
T ss_pred HHHHHHHHHH
Confidence 8887665554
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-23 Score=215.66 Aligned_cols=211 Identities=18% Similarity=0.194 Sum_probs=142.6
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCC--ccE
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKK--SEW 658 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~--~~w 658 (832)
|++|+||||++ .++.+++++.++|++| +++|+.|+++|||+...+.+++..++ ..++|++||+.++..+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999998 6678999999999999 78999999999999999998888776 56899999999988653 345
Q ss_pred EEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEE
Q 045882 659 ETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVE 738 (832)
Q Consensus 659 ~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vE 738 (832)
...++ ..|............+.....+. . ...........+ .+.+...+ +.+. ..+.+.++..++|
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~-------~~~~~~~~-~~~~-~~~~~~~~~~~~e 142 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSRLKVQYP-R-RASLVKMRYGID-------VDTVREII-KELG-LNLVAVDSGFDIH 142 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhhhccccc-c-ccceEEEeecCC-------HHHHHHHH-HhcC-ceEEEecCCcEEE
Confidence 54332 22322111100000000000000 0 001111110001 11122212 2121 1233335667999
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL 814 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l 814 (832)
|.|+++|||.+++++++++ |++++++++|||+.||++||+.++. +++||++ +..|+|++
T Consensus 143 i~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~~k~~A~~vt 205 (225)
T TIGR01482 143 ILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGF--------------GVAVANAQPELKEWADYVT 205 (225)
T ss_pred EeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCc--------------eEEcCChhHHHHHhcCeec
Confidence 9999999999999999999 9999999999999999999999985 5666664 57899987
Q ss_pred C--ChhH----HHHHHHHh
Q 045882 815 D--DEED----VLALLKGL 827 (832)
Q Consensus 815 ~--~~~e----V~~~L~~l 827 (832)
. +.++ |.+.|+++
T Consensus 206 ~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 206 ESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCCCCcHHHHHHHHHHhh
Confidence 4 5667 88888765
|
catalyze the same reaction as SPP. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-23 Score=212.48 Aligned_cols=207 Identities=18% Similarity=0.219 Sum_probs=141.2
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC-ceEEEeCCEEEEeCCCcc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN-LGIAAEHGYYLRWTKKSE 657 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~-l~liaenGa~i~~~~~~~ 657 (832)
.|+|++|+||||++ .++.+++++.++|++| +++|+.|+|+|||++..+.+.+..++. .++|++||+.+++.+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 37999999999998 6778999999999999 688999999999999999998887764 479999999999865432
Q ss_pred EEEcCcccchhHHHH-HHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeE
Q 045882 658 WETSTVAADFEWKRI-TEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNI 736 (832)
Q Consensus 658 w~~~~~~~~~~w~~~-v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~ 736 (832)
... +. ...|... .... .+....-.... ......+... .. ..+++...+ ....+.+..+...
T Consensus 77 ~~~--~~-~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~---~~----~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FLA--NM-EEEWFLDEEKKK--RFPRDRLSNEY--PRASLVIMRE---GK----DVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EEe--cc-cchhhHHHhhhh--hhhhhhccccc--ceeEEEEecC---Cc----cHHHHHHHH----HhCCeEEEecCce
Confidence 111 11 1111100 0000 01000000000 0011111110 10 112233333 2334555556678
Q ss_pred EEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccce
Q 045882 737 VEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARY 812 (832)
Q Consensus 737 vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y 812 (832)
+||.|.+++||.+++++++++ |++++++++|||+.||++||+.++. +++||+. +..|+|
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~--------------~vam~na~~~~k~~A~~ 201 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGF--------------KVAVANADDQLKEIADY 201 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCC--------------eEEcCCccHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999985 5566653 678999
Q ss_pred EeC--ChhHHHHHH
Q 045882 813 YLD--DEEDVLALL 824 (832)
Q Consensus 813 ~l~--~~~eV~~~L 824 (832)
+++ +.++|.++|
T Consensus 202 v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 202 VTSNPYGEGVVEVL 215 (215)
T ss_pred EcCCCCCchhhhhC
Confidence 985 456677654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-22 Score=224.42 Aligned_cols=269 Identities=18% Similarity=0.264 Sum_probs=197.7
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhC
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLG 278 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 278 (832)
.|+|+||+.. .+...++++.|++++.+.+|..|. ++.++ .++.|.+.+. +...++.. ..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~~~-------------~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PELLD-------------KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhHhc-------------cCCEEEEcCH-HHHHHHHh---hC-
Confidence 5999999843 445667888999999999997762 22221 3566666554 33333321 11
Q ss_pred CcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCCHHHHHHH
Q 045882 279 LDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKGISLKLLA 355 (832)
Q Consensus 279 ~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KGi~~~l~A 355 (832)
...++.++|+|||...|.+.. ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 012467799999988775321 12233444 367899999999999999999999
Q ss_pred HHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcce
Q 045882 356 MEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCI 435 (832)
Q Consensus 356 ~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~v 435 (832)
+.++.+++|+++ |+++|.+......+..++++++.+++.+++. .++ +.+.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 9999966533222334566777777666532 254 456789999999999999999
Q ss_pred eccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---Cce-EeCCCCHHHHHHHHHHHh
Q 045882 436 VNAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAI-RVNPWDIDAVADALHDAI 510 (832)
Q Consensus 436 vtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~-~VnP~d~~~~A~ai~~aL 510 (832)
+||. .||||++++|||||+ .|+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~G-------------------~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAG-------------------KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHcC-------------------CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 599999999999994 4699999999888773 365 678999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHH
Q 045882 511 TMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (832)
+.++. ..+.++.++++ ..+++...++++++.++.
T Consensus 343 ~d~~~--~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPEL--TQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHHH--HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 87643 44556666554 668988889988887764
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=231.84 Aligned_cols=315 Identities=16% Similarity=0.129 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChh--hhh------------c
Q 045882 177 WRAYVSANKVFADKIMEVI-NPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSE--IYR------------T 241 (832)
Q Consensus 177 w~~Y~~vN~~fa~~v~~~~-~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e--~~r------------~ 241 (832)
|.....+...+.+.+.+.. +| |+|++|+++..++..++++.. ++|+.++.|....... +.+ .
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYN 170 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcc
Confidence 4333444444444443322 34 999999988777777776655 5789999997532210 000 0
Q ss_pred CCchH-HHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCCh
Q 045882 242 LPVRN-EILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSS 320 (832)
Q Consensus 242 lp~r~-~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~ 320 (832)
++.+- .....+..+|.|...+...+..-+. ...+ -...++.++|+|||++.|.+....+..
T Consensus 171 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~~~---------------~~~~ki~vIpnGvd~~~f~~~~~~~~~ 232 (439)
T TIGR02472 171 ISRRIEAEEETLAHASLVITSTHQEIEEQYA---LYDS---------------YQPERMQVIPPGVDLSRFYPPQSSEET 232 (439)
T ss_pred hHHHHHHHHHHHHhCCEEEECCHHHHHHHHH---hccC---------------CCccceEEECCCcChhhcCCCCccccc
Confidence 01110 0112344566655544322211110 0000 123467789999999998753221111
Q ss_pred HHHHHHHHHHc--CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHH----HHHHHHH
Q 045882 321 SIKVKEIREQF--KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQ----DAKLETY 394 (832)
Q Consensus 321 ~~~~~~l~~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~----~l~~ev~ 394 (832)
......+++.. .++++|++|||+++.||+..+|+||.++.+..+.. ++++ .+|... ..+.++ ++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~~ 307 (439)
T TIGR02472 233 SEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKVL 307 (439)
T ss_pred hhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHHH
Confidence 11112222221 46789999999999999999999998643221111 2222 344211 111111 2223344
Q ss_pred HHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc----CcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCC
Q 045882 395 TITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALA----ECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVC 470 (832)
Q Consensus 395 ~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~ 470 (832)
.+++++ +- ...+.+.+.++.+++.++|+.| |+||+||.+||||++++|||||+
T Consensus 308 ~~~~~~----~l---~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G---------------- 364 (439)
T TIGR02472 308 LLIDRY----DL---YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG---------------- 364 (439)
T ss_pred HHHHHc----CC---CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----------------
Confidence 444443 22 2234456788999999999988 99999999999999999999994
Q ss_pred CCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHH
Q 045882 471 PRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDL 544 (832)
Q Consensus 471 ~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l 544 (832)
.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++. +++++...++.++++ ..+++..-++.+++-|
T Consensus 365 ---~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 365 ---LPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ---CCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 4799999999998883 48999999999999999999984 455666667777766 4578888787776654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=215.15 Aligned_cols=219 Identities=15% Similarity=0.079 Sum_probs=147.8
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc--
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE-- 657 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~-- 657 (832)
+|++|+||||++ .++.+.+.+.++|++| ++.|+.|+|+|||+...+.+++..++ ..++|++||++|+..++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999998 4452444699999999 68899999999999999999998876 3689999999999865432
Q ss_pred ---EEEcCcccchhHHHHHHHHHHHHHhcCCceEEe-ecce--------eE-------EEEeccCCCCCCchhHHHHHHH
Q 045882 658 ---WETSTVAADFEWKRITEPVMKLYTEATDGSYIE-KKET--------AL-------VWHYQDAAPGFGSCQAKELLDH 718 (832)
Q Consensus 658 ---w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie-~k~~--------~l-------~~~~~~ad~~~~~~~a~el~~~ 718 (832)
|... ...+ .+.+.++++.+.+..+..+.. .... .+ ... ......+ .. ..+....
T Consensus 77 ~~~~~~~---~~i~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~~ 149 (256)
T TIGR01486 77 PEYPVIA---LGIP-YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQR-REYSETI-LW-SEERRER 149 (256)
T ss_pred CCeEEEE---cCCC-HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhh-CccCCce-ec-ChHHHHH
Confidence 2211 1222 256667776554332111100 0000 00 000 0000000 01 1233344
Q ss_pred HHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCC--cceEEEEeCChhhHHHHHHcccccCCCCCCCCC
Q 045882 719 LESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKL--PDFVLCVGDDRSDEDMFESISQATYGSSLPIAP 796 (832)
Q Consensus 719 l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~--~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~ 796 (832)
+...+....+.+..+..++||.|+++|||.|++++++++ |++ .+++++|||+.||++||+.++.
T Consensus 150 ~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~----------- 215 (256)
T TIGR01486 150 FTEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL----------- 215 (256)
T ss_pred HHHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE-----------
Confidence 444444444555556679999999999999999999999 998 9999999999999999999986
Q ss_pred cEEEEEeCCcc-------cc--cc-eEe--CChhHHHHHHHHh
Q 045882 797 EIFACTVGQKP-------SK--AR-YYL--DDEEDVLALLKGL 827 (832)
Q Consensus 797 ~~f~v~vG~~~-------s~--A~-y~l--~~~~eV~~~L~~l 827 (832)
+|+||++. .. |. |++ ++.++|.+.|+++
T Consensus 216 ---~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 ---AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred ---EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 45555542 22 34 666 4678999999876
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-22 Score=231.48 Aligned_cols=318 Identities=14% Similarity=0.134 Sum_probs=210.8
Q ss_pred HhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhhc------CCCeEEEEecCCC-----CChhhhhcC
Q 045882 175 LLWRAYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRRF------HRVKLGFFLHSPF-----PSSEIYRTL 242 (832)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~~------~~~~ig~flH~Pf-----P~~e~~r~l 242 (832)
+....|.-.++..++.+.+. ++| |+|++||+|..++|.+++++. .++|+.++.|... |.......+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34556666666666655442 355 999999999999999998764 4789999999742 211111113
Q ss_pred Cch------------HHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchH
Q 045882 243 PVR------------NEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGR 310 (832)
Q Consensus 243 p~r------------~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~ 310 (832)
|.. .-+-.++..||.|---++.|++...+....-.|++. ....+..++.++|+|||++.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 311 112235777888777777777654320000001110 00112446788999999998
Q ss_pred HHhhcCCCC------------hHHHHHHHHHHc-----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEE
Q 045882 311 LESALNHPS------------SSIKVKEIREQF-----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLV 373 (832)
Q Consensus 311 ~~~~~~~~~------------~~~~~~~l~~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 373 (832)
|.+... +. .......+++++ +++++|++|+|+++.||++.+++|+.++++. + +.|+
T Consensus 268 ~~p~~d-~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lv 340 (489)
T PRK14098 268 WNPSTD-KLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLV 340 (489)
T ss_pred cCCccc-ccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEE
Confidence 875321 10 011233455555 2568999999999999999999999998753 3 4488
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeee
Q 045882 374 QIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTIC 453 (832)
Q Consensus 374 qi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 453 (832)
++|.+ +. .+++++++++++.. + .|.+. +.++.+++..+|++||+||+||..||||++.+|||+|
T Consensus 341 ivG~G-----~~--~~~~~l~~l~~~~~------~--~V~~~-g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~ 404 (489)
T PRK14098 341 ICGSG-----DK--EYEKRFQDFAEEHP------E--QVSVQ-TEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY 404 (489)
T ss_pred EEeCC-----CH--HHHHHHHHHHHHCC------C--CEEEE-EecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC
Confidence 88842 21 24456666665531 1 25444 4688899999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhhcCCCCCceEEeccCccccccCC-------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHH
Q 045882 454 RQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-------GAIRVNPWDIDAVADALHDAITM--SDVEKQLRHEKH 524 (832)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-------~a~~VnP~d~~~~A~ai~~aL~m--~~~e~~~r~~~~ 524 (832)
+.|+|++..+|+.+.+. +|++++|.|+++++++|.+++.+ .++..+...++
T Consensus 405 -------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~- 464 (489)
T PRK14098 405 -------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLE- 464 (489)
T ss_pred -------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHH-
Confidence 44689999999988772 48999999999999999998743 22222221111
Q ss_pred HhhhhcCCHHHHHHHHHHHHHHH
Q 045882 525 YRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 525 ~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
.....+++..-++++++-.+++
T Consensus 465 -~~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 465 -AMERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred -HhcCCCChHHHHHHHHHHHHHH
Confidence 1235677777777776655543
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=215.91 Aligned_cols=222 Identities=17% Similarity=0.224 Sum_probs=151.1
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEEEeCCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i~~~~~ 655 (832)
+.+|++|+||||+++.+.+...++++.++++++ .++|+.++++|||+...+......++ ...+|++||+.|+.++.
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~ 79 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGA 79 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCC
Confidence 358999999999975434567789999999999 68899999999999999999866543 23489999999987541
Q ss_pred c----cEEEcCcccchhHH-HHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC--CE
Q 045882 656 S----EWETSTVAADFEWK-RITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE--PV 728 (832)
Q Consensus 656 ~----~w~~~~~~~~~~w~-~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~--~~ 728 (832)
. .|.... ...|. +.+..+...+....+....+.+...+.+.... + .+.++...+.+.+... .+
T Consensus 80 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~---~----~~~~~~~~l~~~l~~~~~~~ 149 (249)
T TIGR01485 80 EVPDQHWAEYL---SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDP---E----AAPEVIKQLTEMLKETGLDV 149 (249)
T ss_pred CcCCHHHHHHH---hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEech---h----hhhHHHHHHHHHHHhcCCCE
Confidence 1 111111 11233 22333333333333444344445555555431 1 1223445555555433 23
Q ss_pred E-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc
Q 045882 729 V-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKP 807 (832)
Q Consensus 729 ~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~ 807 (832)
. +.+++.++||+|+++|||.|++++++.+ |++++.+++|||+.||++||+.++. .+|+|+++.
T Consensus 150 ~~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~na~ 213 (249)
T TIGR01485 150 KLIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVSNAQ 213 (249)
T ss_pred EEEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEECCCH
Confidence 3 4678899999999999999999999999 9999999999999999999998432 356666642
Q ss_pred ----cc-------cceEeC--ChhHHHHHHHHh
Q 045882 808 ----SK-------ARYYLD--DEEDVLALLKGL 827 (832)
Q Consensus 808 ----s~-------A~y~l~--~~~eV~~~L~~l 827 (832)
.. ..|+.+ ..+++++.|+++
T Consensus 214 ~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 214 EELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 11 125554 367888888765
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.5e-22 Score=228.91 Aligned_cols=291 Identities=16% Similarity=0.182 Sum_probs=197.0
Q ss_pred CEEEEeCcccccHHHHHHhhcC--CCeEEEEecCCCCC----hhhhhcCCch--------------H-HHHHHHHhCCEE
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFH--RVKLGFFLHSPFPS----SEIYRTLPVR--------------N-EILKALLNADLI 258 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~--~~~ig~flH~PfP~----~e~~r~lp~r--------------~-~il~~ll~~dli 258 (832)
|+|++||+|..++|.++++... ++++.++.|...+. .+.+..++.. - -+-.++..||.|
T Consensus 130 DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 209 (473)
T TIGR02095 130 DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRV 209 (473)
T ss_pred CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcC
Confidence 9999999999999999988765 38999999976421 1222211111 0 122356667777
Q ss_pred eecChhhHHHHHHHHHHHhCCcccccCceeeEE--EcCeEEEEEEeecCCCchHHHhhcCCC-----------ChHHHHH
Q 045882 259 GFHTFDYARHFLSCCSRMLGLDYESKRGYIGLE--YFGRTIYVKILHVGIHMGRLESALNHP-----------SSSIKVK 325 (832)
Q Consensus 259 gf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~i~P~GId~~~~~~~~~~~-----------~~~~~~~ 325 (832)
..-++.|++..... ..+. +++ +..+..++.++|+|||.+.|.+..... .......
T Consensus 210 ~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 277 (473)
T TIGR02095 210 TTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKE 277 (473)
T ss_pred eecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHH
Confidence 66666665544321 0000 000 011334678899999999886431100 0112234
Q ss_pred HHHHHcC-----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 045882 326 EIREQFK-----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRI 400 (832)
Q Consensus 326 ~l~~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i 400 (832)
.++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+.+|.+. +++++++++++.+.
T Consensus 278 ~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g~-------~~~~~~l~~~~~~~ 344 (473)
T TIGR02095 278 ALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTGD-------PELEEALRELAERY 344 (473)
T ss_pred HHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCCC-------HHHHHHHHHHHHHC
Confidence 5666662 6789999999999999999999999987642 4488887432 23455666666442
Q ss_pred hcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc
Q 045882 401 NETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480 (832)
Q Consensus 401 N~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (832)
+. .+.++. .++.+++..+|++||++++||..||||++.+|||+| +.|+|+|.
T Consensus 345 ~~--------~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-------------------G~pvI~s~ 396 (473)
T TIGR02095 345 PG--------NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY-------------------GTVPIVRR 396 (473)
T ss_pred CC--------cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-------------------CCCeEEcc
Confidence 21 144443 467888899999999999999999999999999999 44799999
Q ss_pred CccccccC-C--------CceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 481 FIGCSPSL-S--------GAIRVNPWDIDAVADALHDAITM---SDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 481 ~~G~s~~l-~--------~a~~VnP~d~~~~A~ai~~aL~m---~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
.+|..+.+ + +|++++|.|+++++++|.+++.+ .++.++...++.. ...+++...++++++-.+
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 99999988 2 37999999999999999999873 2333333222222 245777777777765443
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=225.87 Aligned_cols=297 Identities=17% Similarity=0.150 Sum_probs=190.6
Q ss_pred hCCCCCEEEEeCcccccHHHHHHhh-cCCCeEEEEecCC-----CCChhhhhc--CCch-------------HHHHHHHH
Q 045882 195 INPEEDYVWIHDYHLMVLPTFLRRR-FHRVKLGFFLHSP-----FPSSEIYRT--LPVR-------------NEILKALL 253 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~llp~~lr~~-~~~~~ig~flH~P-----fP~~e~~r~--lp~r-------------~~il~~ll 253 (832)
++| |||++||+|..++|.+++.+ ..++++.++.|.. ||. ..+.. +|.. .-+-.++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 355 99999999999999999753 3467899999964 221 11111 1110 01233456
Q ss_pred hCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCC-----C------hHH
Q 045882 254 NADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHP-----S------SSI 322 (832)
Q Consensus 254 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~-----~------~~~ 322 (832)
.||.|---++.|++...+.- .-.|++. .+..+..++.++|+|||++.|.+..... . ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 66666555555554432100 0000000 0011234678899999999887532100 0 011
Q ss_pred HHHHHHHHcC-----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHH
Q 045882 323 KVKEIREQFK-----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTIT 397 (832)
Q Consensus 323 ~~~~l~~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv 397 (832)
....++++++ +.++|++|+|+++.||+..+++|+.+++++ + +.|+++|.+ + .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~G-----~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGSG-----D--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEecC-----C--HHHHHHHHHHH
Confidence 2345666662 357888999999999999999999998753 3 348888742 2 13455666665
Q ss_pred HHHhcccCCCCcccEEEecCCCCHHHHHHHH-HhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceE
Q 045882 398 KRINETYGVPGYEPVILIDRPVPLHEKTAYY-ALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSML 476 (832)
Q Consensus 398 ~~iN~~~~~~~~~pv~~~~~~v~~~el~aly-~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~l 476 (832)
++. + + .++++.+. .+++..+| +.||+||+||.+|||||+.+|||+|+ .++
T Consensus 346 ~~~----~--~--~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G-------------------~pp 396 (485)
T PRK14099 346 QAY----P--G--QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG-------------------AVP 396 (485)
T ss_pred HHC----C--C--CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC-------------------CCc
Confidence 542 2 1 24344444 67888877 57999999999999999999999994 367
Q ss_pred EeccCccccccC-C-----------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 477 VISEFIGCSPSL-S-----------GAIRVNPWDIDAVADALHDAIT--MSDVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 477 V~Se~~G~s~~l-~-----------~a~~VnP~d~~~~A~ai~~aL~--m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
|+|..+|..+.+ . +|++|+|.|+++++++|.+|+. ..++.++...++.+ ...+++..-++++++
T Consensus 397 Vvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~ 474 (485)
T PRK14099 397 VVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAA 474 (485)
T ss_pred EEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHH
Confidence 889999998876 2 4899999999999999998543 13333333333322 356788888888777
Q ss_pred HHHHHH
Q 045882 543 DLERAC 548 (832)
Q Consensus 543 ~l~~~~ 548 (832)
-.+++.
T Consensus 475 lY~~l~ 480 (485)
T PRK14099 475 LYRSLV 480 (485)
T ss_pred HHHHHH
Confidence 666554
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-21 Score=217.87 Aligned_cols=287 Identities=17% Similarity=0.179 Sum_probs=206.2
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhc---CCc--hHHHH--HHHHhCCEEeecChhhHHHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT---LPV--RNEIL--KALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~---lp~--r~~il--~~ll~~dligf~t~~~~~~Fl~ 271 (832)
.|+|++|++....++.++++. .++++.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+....+.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 499999997766666666554 467899999965421111110 121 11222 2456789999999887777653
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCC
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKG 348 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KG 348 (832)
. .+. ...++.++|+|||.+.|.+. + ....+.++ .++++|+++||+.+.||
T Consensus 181 ~----~~~---------------~~~ki~vi~ngvd~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YDA---------------DPDRIDVVAPGADLERFRPG----D----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cCC---------------ChhhEEEECCCcCHHHcCCC----c----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 2 121 12367789999999887532 1 11233444 36789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCCh-hHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 045882 349 ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTG-KDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAY 427 (832)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~al 427 (832)
+..+++|++++++++|+ .++.|+++|.+. +++ +.. +++++++++.+ ....+.+.+.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~--~~~~l~ivG~~~-~~g~~~~----~~l~~~~~~~~-------l~~~v~~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPD--RNLRVIVVGGPS-GSGLATP----DALIELAAELG-------IADRVRFLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCC--cceEEEEEeCCC-CCcchHH----HHHHHHHHHcC-------CCceEEECCCCCHHHHHHH
Confidence 99999999999999887 246689898654 223 333 34444444432 2233445668999999999
Q ss_pred HHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHH
Q 045882 428 YALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (832)
Q Consensus 428 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ 504 (832)
|+.||+|++||..||||++++|||+|+ .|+|+|..+|..+.+. .|++++|.|++++|+
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G-------------------~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~ 360 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACG-------------------TPVVAARVGGLPVAVADGETGLLVDGHDPADWAD 360 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcC-------------------CCEEEecCCCcHhhhccCCceEECCCCCHHHHHH
Confidence 999999999999999999999999994 4699999999888773 389999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 505 ALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
+|.++++. ++.+....++.++++..+++...++.+++-..++
T Consensus 361 ~i~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 361 ALARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999984 4555555666677778888888888887766543
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.3e-22 Score=222.87 Aligned_cols=302 Identities=16% Similarity=0.174 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCC--hhh-hh-cCCch--------HH
Q 045882 180 YVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPS--SEI-YR-TLPVR--------NE 247 (832)
Q Consensus 180 Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~--~e~-~r-~lp~r--------~~ 247 (832)
...+.+.......+.++| |+|+.| +.+....++++.+|++++..++|..+-. .+. |. ..+.+ ..
T Consensus 71 ~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (396)
T cd03818 71 GQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHh
Confidence 333333333332344556 899999 5666777899999999988877643311 110 10 11111 11
Q ss_pred ---HHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHH
Q 045882 248 ---ILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKV 324 (832)
Q Consensus 248 ---il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~ 324 (832)
....+-.+|.+...+......|.+. + ..++.++|+|||.+.|.+... . .
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~~-------------------~---~~ki~vI~ngvd~~~f~~~~~---~---~ 198 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPAE-------------------L---RSRISVIHDGIDTDRLRPDPQ---A---R 198 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcHh-------------------h---ccceEEeCCCccccccCCCch---h---h
Confidence 2345677888777665444433210 0 135778999999998864211 1 1
Q ss_pred HHHHHH---cCCCEEEEEecc-ccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 045882 325 KEIREQ---FKGKKVIVGVDD-MDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRI 400 (832)
Q Consensus 325 ~~l~~~---~~~~~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i 400 (832)
..++.. ..++++|++++| +.+.||+..+++|+.++.+++|+++ |+++|......+...+......+++.+++
T Consensus 199 ~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~~~~ 274 (396)
T cd03818 199 LRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHMLDEL 274 (396)
T ss_pred hcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHHHHh
Confidence 111111 146789999998 9999999999999999999999877 89888532111110000001112233333
Q ss_pred hcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc
Q 045882 401 NETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480 (832)
Q Consensus 401 N~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (832)
+.+.+. ..|+ +.+.++.+++.++|+.||++|+||..||+|++++|||||+ .|+|+|.
T Consensus 275 ~~~~~~---~~V~-f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G-------------------~PVIas~ 331 (396)
T cd03818 275 GGRLDL---SRVH-FLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG-------------------CLVVGSD 331 (396)
T ss_pred hcccCc---ceEE-EeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC-------------------CCEEEcC
Confidence 332221 2354 4578999999999999999999999999999999999994 4799999
Q ss_pred CccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc-CCHHHHHHHHH
Q 045882 481 FIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS-HDVAYWAHSFM 541 (832)
Q Consensus 481 ~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l 541 (832)
.+|..+.+. .|++|+|.|++++|++|.++++.+ +++....++.++++.+ ++....+++++
T Consensus 332 ~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 332 TAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 999888883 489999999999999999999854 5556667777887766 67666565554
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.7e-22 Score=211.45 Aligned_cols=226 Identities=15% Similarity=0.115 Sum_probs=150.9
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCc
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKS 656 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~ 656 (832)
..|+|++|+||||++ .++.+++.+.++|++| ++.|+.++|+|||+...+...+..++ ..++|+.||++|+..++.
T Consensus 3 ~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~ 78 (273)
T PRK00192 3 MKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNY 78 (273)
T ss_pred cceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccc
Confidence 368999999999998 5667888999999999 68899999999999999999988875 357999999999875431
Q ss_pred -------------cEEEcCcccchhHHHHHHHHHHHHHhcCCceE-Eeecc--------eeEEE---E-ecc--CCCCCC
Q 045882 657 -------------EWETSTVAADFEWKRITEPVMKLYTEATDGSY-IEKKE--------TALVW---H-YQD--AAPGFG 708 (832)
Q Consensus 657 -------------~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~-ie~k~--------~~l~~---~-~~~--ad~~~~ 708 (832)
.|..... .+ .+.+.++++.+.+.....+ ..... ..+.. . ... ....+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PRK00192 79 FPFQPDGERLKGDYWVIELG---PP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFL 154 (273)
T ss_pred cccCCccccccCCceEEEcC---CC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCcee
Confidence 2322211 12 3455555554433211100 00000 00000 0 000 000000
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCc-ceEEEEeCChhhHHHHHHccccc
Q 045882 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLP-DFVLCVGDDRSDEDMFESISQAT 787 (832)
Q Consensus 709 ~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~-d~vl~~GDd~ND~~Mf~~a~~~~ 787 (832)
.....+..+.+...+...++.+..++.++||.|.+ +||.|++++++++ |+++ +++++|||+.||++||+.++.
T Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~-- 228 (273)
T PRK00192 155 WNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADI-- 228 (273)
T ss_pred ecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCe--
Confidence 00012334444444444456666677899999999 9999999999999 9999 999999999999999999985
Q ss_pred CCCCCCCCCcEEEEEeCCc----c----ccc-ceEe----CChhHHHHHHHHhhh
Q 045882 788 YGSSLPIAPEIFACTVGQK----P----SKA-RYYL----DDEEDVLALLKGLAA 829 (832)
Q Consensus 788 ~~~~~~~~~~~f~v~vG~~----~----s~A-~y~l----~~~~eV~~~L~~l~~ 829 (832)
+++||++ + ..| +++. ++.++|.+.|+++..
T Consensus 229 ------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 229 ------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred ------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 4555553 2 333 4555 347899999998653
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=219.95 Aligned_cols=281 Identities=14% Similarity=0.114 Sum_probs=195.1
Q ss_pred HHhCCCCCEEEEeCcccccH-HHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHH-HHHhCCEEeecChhhHHHHH
Q 045882 193 EVINPEEDYVWIHDYHLMVL-PTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILK-ALLNADLIGFHTFDYARHFL 270 (832)
Q Consensus 193 ~~~~~~~d~vwvhDyhl~ll-p~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~-~ll~~dligf~t~~~~~~Fl 270 (832)
+..+| |+|++|+++.... ...+-.+..++|+.+..|..|+..+... .....+.+ .+-.+|.+.+.+....+.+.
T Consensus 85 ~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 160 (398)
T cd03796 85 IRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTV 160 (398)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHH
Confidence 33456 9999999875543 3333344456899999998765332211 01112222 24467888887776555442
Q ss_pred HHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHH
Q 045882 271 SCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGIS 350 (832)
Q Consensus 271 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~ 350 (832)
.. .+ ....++.++|+|+|.+.|.+... . ..+++++|+++||+.+.||+.
T Consensus 161 ~~----~~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~ 209 (398)
T cd03796 161 LR----AS---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGID 209 (398)
T ss_pred HH----hC---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHH
Confidence 11 01 11235678999999988863211 0 125678999999999999999
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
.+++|+..+.+++|+++ |+.+|. ++..+++ .+++++. + ....+.+.+.++.+++.++|+.
T Consensus 210 ~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l----~~~~~~~----~---l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 210 LLVGIIPEICKKHPNVR----FIIGGD-----GPKRILL----EEMREKY----N---LQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred HHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHH----HHHHHHh----C---CCCeEEEeCCCCHHHHHHHHHh
Confidence 99999999988888876 888874 3333333 3444433 2 1223334578999999999999
Q ss_pred cCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CC-ceEeCCCCHHHHHHHHHH
Q 045882 431 AECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SG-AIRVNPWDIDAVADALHD 508 (832)
Q Consensus 431 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~-a~~VnP~d~~~~A~ai~~ 508 (832)
||++|+||..||||++++|||||+ .|+|+|..+|..+.+ ++ +++++| |.++++++|.+
T Consensus 270 ad~~v~pS~~E~~g~~~~EAma~G-------------------~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~ 329 (398)
T cd03796 270 GHIFLNTSLTEAFCIAIVEAASCG-------------------LLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEE 329 (398)
T ss_pred CCEEEeCChhhccCHHHHHHHHcC-------------------CCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHH
Confidence 999999999999999999999994 469999999998877 34 445544 99999999999
Q ss_pred HhcCCHHHHHHHHHHHHh-hhhcCCHHHHHHHHHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYR-YICSHDVAYWAHSFMQDLERACR 549 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~~ 549 (832)
++.++.+.+.. .++.++ ....++...-++++++..++...
T Consensus 330 ~l~~~~~~~~~-~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 330 AISILRTGKHD-PWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHhChhhhhhH-HHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 99876544333 344444 45668888888888887777543
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.1e-22 Score=207.09 Aligned_cols=214 Identities=17% Similarity=0.206 Sum_probs=146.5
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEEEeCCCc-
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYLRWTKKS- 656 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i~~~~~~- 656 (832)
+|++|+||||++ .++.+++.+ ++++ + +++|+.++++|||+...+.+.+..++ ...+|++||+.|+.....
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 589999999998 566677666 7776 5 68899999999999999999998764 234999999999765321
Q ss_pred ---cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecce--eEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE-E
Q 045882 657 ---EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKET--ALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVV-V 730 (832)
Q Consensus 657 ---~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~--~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~-v 730 (832)
.|... ....|. ... +..+....++..++.+.. ...+++... ++.. ....++.+.+... ...+. +
T Consensus 75 ~~~~~~~~---~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~--~~~~~~~ 144 (236)
T TIGR02471 75 PDRFWQKH---IDHDWR--RQA-VVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ--SQAAKVI 144 (236)
T ss_pred CChhHHHH---HhcCCC--HHH-HHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc--cCCEEEE
Confidence 11100 001121 111 233344566766655442 344555432 2211 1123344444332 12232 4
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----
Q 045882 731 KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---- 806 (832)
Q Consensus 731 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---- 806 (832)
.++..++||.|+++|||.|++.|++++ |++++++++|||+.||++||+.++. +++||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHHH
Confidence 567788999999999999999999999 9999999999999999999999875 5566664
Q ss_pred ccccc----eEeC--ChhHHHHHHHHh
Q 045882 807 PSKAR----YYLD--DEEDVLALLKGL 827 (832)
Q Consensus 807 ~s~A~----y~l~--~~~eV~~~L~~l 827 (832)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 45677 6664 457899998865
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=220.15 Aligned_cols=274 Identities=17% Similarity=0.110 Sum_probs=197.7
Q ss_pred CCEEEEeCcccccHHHHHHhh-cCCCeEEEEecCCCCCh-hhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRR-FHRVKLGFFLHSPFPSS-EIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRM 276 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~-~~~~~ig~flH~PfP~~-e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~ 276 (832)
.|+|+.|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-+.+-.+|.|...+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 399999988876777777763 22446677889542111 1110 11222333455789887766544443321
Q ss_pred hCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHH
Q 045882 277 LGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAM 356 (832)
Q Consensus 277 l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~ 356 (832)
+|.. ..+|.++|+|||.+.|..... ....+...|++|||+.+.||+..+++|+
T Consensus 192 ~g~~---------------~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGCP---------------PEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCCC---------------HHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 1221 235677999999998853210 0123456799999999999999999999
Q ss_pred HHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCccee
Q 045882 357 EQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIV 436 (832)
Q Consensus 357 ~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vv 436 (832)
..+.+++|+++ |+++|. |+.. +++++++++.+ ....+.+.|.++.+++..+|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG~-----G~~~----~~l~~~~~~~~-------l~~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILGI-----GPWE----RRLRTLIEQYQ-------LEDVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEEC-----chhH----HHHHHHHHHcC-------CCCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888766 888873 3433 34444544432 2335566789999999999999999999
Q ss_pred cccc------cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHH
Q 045882 437 NAVR------DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALH 507 (832)
Q Consensus 437 tS~~------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~ 507 (832)
||.. ||++++++|||+|+ .|+|+|..+|+.+.+. +|++|+|.|++++|++|.
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~G-------------------~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~ 365 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAVG-------------------IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLA 365 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhCC-------------------CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHH
Confidence 9984 99999999999994 4699999999988883 489999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHH
Q 045882 508 DAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 545 (832)
+++++++++++...++.++++ ..++....++.+.+-++
T Consensus 366 ~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 366 AFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999977777777778888877 45888888887776654
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=206.32 Aligned_cols=195 Identities=13% Similarity=0.154 Sum_probs=127.5
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC--CC-ceEEEeCCEEEEeC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC--EN-LGIAAEHGYYLRWT 653 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~~-l~liaenGa~i~~~ 653 (832)
.+.|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+.++.. .. .++|+.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 5689999999999999 7788999999999999 6889999999999999998888642 12 36899999999975
Q ss_pred CCccEEEcCcc-cchhHHHHHHHHHHHHHh--------cCCceEEeecceeEEEEec-cCC-----CC---CC--chhHH
Q 045882 654 KKSEWETSTVA-ADFEWKRITEPVMKLYTE--------ATDGSYIEKKETALVWHYQ-DAA-----PG---FG--SCQAK 713 (832)
Q Consensus 654 ~~~~w~~~~~~-~~~~w~~~v~~i~~~~~e--------~~~gs~ie~k~~~l~~~~~-~ad-----~~---~~--~~~a~ 713 (832)
++..+...++. .+. +.+.++++...+ ...+.+++.........+. ... .. +. .....
T Consensus 79 ~~~i~~~~i~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (247)
T PTZ00174 79 GELFHSQSILKFLGE---EKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIRE 155 (247)
T ss_pred CeEEEEEcchhcCCH---HHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHH
Confidence 43334433221 111 233333332211 1123333322111111110 000 00 00 01123
Q ss_pred HHHHHHHHHhcCCCEEEEE-cCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHHccc
Q 045882 714 ELLDHLESVLANEPVVVKR-GYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFESISQ 785 (832)
Q Consensus 714 el~~~l~~~l~~~~~~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~a~~ 785 (832)
++.+.+.+.+.+..+.... +..++||.|+++|||+|++.|+++ +++|+|||| +.||++||+.++.
T Consensus 156 ~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 156 KFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 4455554444333343333 457999999999999999999986 489999999 8999999998764
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.3e-22 Score=205.65 Aligned_cols=195 Identities=15% Similarity=0.107 Sum_probs=127.9
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-C-ceEEEeCCEEEEeCCCcc-
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-N-LGIAAEHGYYLRWTKKSE- 657 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~-l~liaenGa~i~~~~~~~- 657 (832)
+|++|+||||++ .++.+++.++++|++| +++|+.|+++|||+...+.+++..++ . .++||+||+.|+......
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999998 4555666699999999 68899999999999999999998875 3 579999999998753221
Q ss_pred ----EEEcCcccchhHHHHHHHHHHHHHhcCCce-EEeecc--------eeEEE------EeccCCCCCCchhHHHHHHH
Q 045882 658 ----WETSTVAADFEWKRITEPVMKLYTEATDGS-YIEKKE--------TALVW------HYQDAAPGFGSCQAKELLDH 718 (832)
Q Consensus 658 ----w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs-~ie~k~--------~~l~~------~~~~ad~~~~~~~a~el~~~ 718 (832)
|... ...+| +.+.++++...+..... ...... ..+.. ..+.....+......+..+.
T Consensus 77 ~~~~~~~~---~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (221)
T TIGR02463 77 EPGYPRII---LGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPR 152 (221)
T ss_pred CCCceEEe---cCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHH
Confidence 1111 11222 34555555432211000 000000 00000 00000000000001223333
Q ss_pred HHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 719 LESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 719 l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+.+.+...++.+.++..++||.|.+++||.|++++++++ |++++++++|||+.||++||+++|.+
T Consensus 153 ~~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 153 FTALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 344444445556667789999999999999999999999 99999999999999999999999864
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-20 Score=220.64 Aligned_cols=340 Identities=11% Similarity=0.092 Sum_probs=209.2
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCC----Chh-hhhcCC-----
Q 045882 174 RLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFP----SSE-IYRTLP----- 243 (832)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP----~~e-~~r~lp----- 243 (832)
.+.|..-..++...++.+........|+|+.|...--+++..|+++. +++..+..|+.=. .+. .+....
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 34566666666666666654433223999999888888888887776 5888888885411 111 011111
Q ss_pred -ch-HHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCccc-ccCceeeEEEc--CeEEEEEEeecCCCchHHHhhcCCC
Q 045882 244 -VR-NEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYE-SKRGYIGLEYF--GRTIYVKILHVGIHMGRLESALNHP 318 (832)
Q Consensus 244 -~r-~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~-~~~~~~~~~~~--gr~~~i~i~P~GId~~~~~~~~~~~ 318 (832)
.| +.-+..|-.||.|.-.|+.-...-...+.. .+.-.. ...+..++..+ ...-++.++|+|+|+..|.+.....
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~ 518 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKE 518 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchh
Confidence 01 112256777999988775432211111000 000000 00011111111 1123778899999999886532211
Q ss_pred ChH-HHH----------HHHHHHc-----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCC-
Q 045882 319 SSS-IKV----------KEIREQF-----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARS- 381 (832)
Q Consensus 319 ~~~-~~~----------~~l~~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~- 381 (832)
... ... ...++.+ .++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 519 ~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~ 594 (784)
T TIGR02470 519 KRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAK 594 (784)
T ss_pred hhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCcccc
Confidence 000 000 1112332 368899999999999999999999987744333 3558888865321
Q ss_pred --ChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH----hcCcceecccccCCCCcceeeeeeec
Q 045882 382 --TGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA----LAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 382 --~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~----~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
...+..+..+++.+++++.+. .+ .|.+++...+..+...+|+ .+||||+||.+||||||++|||||+
T Consensus 595 ~s~d~ee~~~i~~L~~la~~~gL----~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG- 667 (784)
T TIGR02470 595 ESKDREEQAEIEKMHNLIDQYQL----HG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG- 667 (784)
T ss_pred cccchhHHHHHHHHHHHHHHhCC----CC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC-
Confidence 111222234456666665432 22 3666553345666666665 2479999999999999999999994
Q ss_pred CCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhh-
Q 045882 456 GTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAIT---MSDVEKQLRHEKHYRYI- 528 (832)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~---m~~~e~~~r~~~~~~~v- 528 (832)
.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++ ..++.++...++.++++
T Consensus 668 ------------------lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~ 729 (784)
T TIGR02470 668 ------------------LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIY 729 (784)
T ss_pred ------------------CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 4799999999999883 4899999999999999999874 24555555566666666
Q ss_pred hcCCHHHHHHHHHHHH
Q 045882 529 CSHDVAYWAHSFMQDL 544 (832)
Q Consensus 529 ~~~~~~~W~~~~l~~l 544 (832)
+.+++...++++++.+
T Consensus 730 ~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 730 EKYTWKIYSERLLTLA 745 (784)
T ss_pred HhCCHHHHHHHHHHHH
Confidence 5688888888877654
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=218.20 Aligned_cols=284 Identities=15% Similarity=0.173 Sum_probs=197.4
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchH----HHHHH-HHhCCEEeecChhhH
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRN----EILKA-LLNADLIGFHTFDYA 266 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~----~il~~-ll~~dligf~t~~~~ 266 (832)
++..+| |+|++|+...+.++.++-.+..++++.+.+|.-+|...-....++.. .+.+. ...+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 444566 99999987766666555334457888888887554321100111100 11121 235788887777666
Q ss_pred HHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc----CCCEEEEEecc
Q 045882 267 RHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF----KGKKVIVGVDD 342 (832)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~~~vil~VdR 342 (832)
+.+... +. ....++.++|+|||.+.|.+... . ..+++++ +++++|+++||
T Consensus 218 ~~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~---~----~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFR---S----EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHHc-----CC--------------CCcCeEEEeCCccCccccCCccc---c----HHHHHHhcCCCCCCeEEEEeCC
Confidence 555421 10 01235778999999998864321 1 1223333 36789999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHH
Q 045882 343 MDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLH 422 (832)
Q Consensus 343 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~ 422 (832)
+.+.||+..+++|++++ |+++ |+++| +|+..+ +++++++. .+|.+ .+.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~~----~l~~~~~~----------~~V~f-~G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYRE----ELEKMFAG----------TPTVF-TGMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHHH----HHHHHhcc----------CCeEE-eccCCHH
Confidence 99999999999888654 6554 88887 344333 34444332 13544 5689999
Q ss_pred HHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC------CceEeCC
Q 045882 423 EKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS------GAIRVNP 496 (832)
Q Consensus 423 el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~------~a~~VnP 496 (832)
++..+|+.||+||+||..||||++++|||||+ .|+|+|..+|+.+.+. +|++++|
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-------------------~PVI~s~~gg~~eiv~~~~~~~~G~lv~~ 384 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMASG-------------------VPVVAARAGGIPDIIPPDQEGKTGFLYTP 384 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHcC-------------------CCEEEcCCCCcHhhhhcCCCCCceEEeCC
Confidence 99999999999999999999999999999994 4799999999888773 2899999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHH-HHHHHHhh
Q 045882 497 WDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQD-LERACRDH 551 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~~ 551 (832)
.|++++|++|.++++ .++.++...++.++++.++++...++.+++. -.++...+
T Consensus 385 ~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 385 GDVDDCVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred CCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 4556666677778888899999999998874 44444433
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=219.59 Aligned_cols=308 Identities=17% Similarity=0.189 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhhc-----CCCeEEEEecCCCCCh----hhhhc--CCc--
Q 045882 179 AYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRRF-----HRVKLGFFLHSPFPSS----EIYRT--LPV-- 244 (832)
Q Consensus 179 ~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~~-----~~~~ig~flH~PfP~~----e~~r~--lp~-- 244 (832)
.|...++...+.+.+. .+| |+|++||+|..++|.++++.. .++++.|..|.+.+.. ..+.. +++
T Consensus 111 ~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 111 RFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 3444444444433332 344 999999999999999998874 5789999999874321 11111 111
Q ss_pred ------------hHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEE--EcCeEEEEEEeecCCCchH
Q 045882 245 ------------RNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLE--YFGRTIYVKILHVGIHMGR 310 (832)
Q Consensus 245 ------------r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~i~P~GId~~~ 310 (832)
..-+..++..||.|..-+..|++..++.- .| .++. ...+..++.++|+|||.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~-~gl~~~~~~~~~ki~~I~NGid~~~ 256 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FG-EGLDGLLRARAGKLSGILNGIDYDV 256 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CC-cchHHHHHhccCCeEEEeCCCcCcc
Confidence 01223456677777666666665543210 00 0000 0112347788999999998
Q ss_pred HHhhcCCC-----------ChHHHHHHHHHHc-----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE
Q 045882 311 LESALNHP-----------SSSIKVKEIREQF-----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ 374 (832)
Q Consensus 311 ~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (832)
|.+..... ........+++++ .++++|+++||+.+.||+..+++|++++.+++ +.|+.
T Consensus 257 ~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi 330 (476)
T cd03791 257 WNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVI 330 (476)
T ss_pred cCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEE
Confidence 87532110 1122334566665 46789999999999999999999999987653 44887
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
+|.+. .++++++.+++.+.. ..++++.+ .+.++...+|+.||++++||..||+|++.+|||+|+
T Consensus 331 ~G~g~-------~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G 394 (476)
T cd03791 331 LGSGD-------PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG 394 (476)
T ss_pred EecCC-------HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC
Confidence 87431 134455555555431 13555554 457777899999999999999999999999999994
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHH
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--------GAIRVNPWDIDAVADALHDAITMS--DVEKQLRHEK 523 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--------~a~~VnP~d~~~~A~ai~~aL~m~--~~e~~~r~~~ 523 (832)
.|+|+|..+|..+.+ + +|+++.|.|+++++++|.++++.. ++++....++
T Consensus 395 -------------------~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~ 455 (476)
T cd03791 395 -------------------TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRN 455 (476)
T ss_pred -------------------CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 468999999999988 3 599999999999999999998643 2332222222
Q ss_pred HHhhhhcCCHHHHHHHHHHH
Q 045882 524 HYRYICSHDVAYWAHSFMQD 543 (832)
Q Consensus 524 ~~~~v~~~~~~~W~~~~l~~ 543 (832)
..+ ..+++..-++++++-
T Consensus 456 ~~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 456 AMA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred Hhc--cCCChHHHHHHHHHH
Confidence 222 235666666665543
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-20 Score=218.24 Aligned_cols=333 Identities=16% Similarity=0.141 Sum_probs=206.4
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCC-----------CCCh-hhhhc
Q 045882 174 RLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSP-----------FPSS-EIYRT 241 (832)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~P-----------fP~~-e~~r~ 241 (832)
.+.|..-.+++...++.+........|+|+-|.+.--+++..|++++ +++..++.|+- |... +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777666766666654443113999999777778888888776 68999999942 1110 01110
Q ss_pred -CCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCccccc---------CceeeEEEcCeEEEEEEeecCCCchHH
Q 045882 242 -LPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESK---------RGYIGLEYFGRTIYVKILHVGIHMGRL 311 (832)
Q Consensus 242 -lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~---------~~~~~~~~~gr~~~i~i~P~GId~~~~ 311 (832)
+....| ...|-.||.|.-.|+.-....-... + .|.+- +-..++.+.. -++.++|+|+|...|
T Consensus 463 ~~r~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i----~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTAD-LIAMNHADFIITSTYQEIAGSKDTV----G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHH-HHHHHhhhHHHhCcHHHHhcccchh----h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhhc
Confidence 001111 2255567766655533221100000 0 00000 0000111111 267889999999988
Q ss_pred HhhcCCC--------ChHHHH---HHHHHHc-----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEE
Q 045882 312 ESALNHP--------SSSIKV---KEIREQF-----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQI 375 (832)
Q Consensus 312 ~~~~~~~--------~~~~~~---~~l~~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (832)
.+..... ...... ...++.+ .++++|++|+|+++.||+..+++||.++.+..|+++ |+++
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~----LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVN----LVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcE----EEEE
Confidence 6422100 000000 0011111 357799999999999999999999998876666544 8888
Q ss_pred ecCCC-CChhHHH--HHHHHHHHHHHHHhcccCCCCcccEEEecC---CCCHHHHHHHHH-hcCcceecccccCCCCcce
Q 045882 376 VNPAR-STGKDVQ--DAKLETYTITKRINETYGVPGYEPVILIDR---PVPLHEKTAYYA-LAECCIVNAVRDGMNLMPY 448 (832)
Q Consensus 376 ~~p~r-~~~~~~~--~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~---~v~~~el~aly~-~ADv~vvtS~~EGmnLv~~ 448 (832)
|.+.. ....+.+ +..+++.+++++.+.. + .|.+++. ..+..++..+|+ ++|+||+||.+||||+|++
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 86411 1111211 1223455565554322 2 2555542 455678888777 5799999999999999999
Q ss_pred eeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHH
Q 045882 449 KYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAIT---MSDVEKQLRHE 522 (832)
Q Consensus 449 Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~---m~~~e~~~r~~ 522 (832)
|||||+ .|+|+|..+|+.+.+. +|++|+|.|++++|++|.+++. .+++.++...+
T Consensus 685 EAMA~G-------------------lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~ 745 (815)
T PLN00142 685 EAMTCG-------------------LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISD 745 (815)
T ss_pred HHHHcC-------------------CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 999994 4799999999999883 4899999999999999988763 35555666666
Q ss_pred HHHhhh-hcCCHHHHHHHHHHHH
Q 045882 523 KHYRYI-CSHDVAYWAHSFMQDL 544 (832)
Q Consensus 523 ~~~~~v-~~~~~~~W~~~~l~~l 544 (832)
+.++.+ +.+++...++++++-.
T Consensus 746 ~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 746 AGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHH
Confidence 667776 5688888888877744
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-20 Score=206.79 Aligned_cols=285 Identities=14% Similarity=0.119 Sum_probs=200.8
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhh-----hcCCchHH-HHHHHHhCCEEeecChhhHHHHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIY-----RTLPVRNE-ILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~-----r~lp~r~~-il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
.|+|++|++...+.+.+++ +..+.++.+.+|..+|..... ........ ....+..+|.|...+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 4999999988776655554 455788999999866532111 00011111 1234566888887777666655421
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCCH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KGi 349 (832)
. -+. ...++.++|+|+|...+.+. . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~~---------------~~~~i~vi~ng~~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PDL---------------DPEKVHVIYNGIDTKEYKPD----D----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CCC---------------CcceEEEecCCCChhhcCCC----c----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 011 12357789999999877531 1 12234444 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|++++. ++++ |+.+|.. ++..++.+++++.+.+.+... ..++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 3333 6666532 222345556666665554322 23778888999999999999
Q ss_pred hcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCH------H
Q 045882 430 LAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDI------D 500 (832)
Q Consensus 430 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~------~ 500 (832)
.|||+|+||..||||++++|||+|+ .|+|+|..+|..+.+. .|++++|.|. +
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G-------------------~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~ 340 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACG-------------------TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQA 340 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcC-------------------CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHH
Confidence 9999999999999999999999994 4799999999888773 4899999998 9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHHH
Q 045882 501 AVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 547 (832)
+++++|.++++. +++++...++.++++ ..+++..+++++++.++++
T Consensus 341 ~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 341 ELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999874 555555556666665 5689999999888776653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.86 E-value=9e-20 Score=204.64 Aligned_cols=207 Identities=12% Similarity=0.133 Sum_probs=156.0
Q ss_pred EEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE
Q 045882 297 IYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ 374 (832)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (832)
.++.++|+|||.+.|.+... . .....++.+ .++.+|+++||+++.||+..+++|+..+++++|+...++.|+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 35677999999988753211 1 111112222 4678999999999999999999999999999987666778998
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
+|. |+..+ ++++.+++.+ ....+++.+. .+++..+|+.||++|+||..||||++++|||+|+
T Consensus 235 ~G~-----g~~~~----~~~~~~~~~~-------~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G 296 (374)
T TIGR03088 235 VGD-----GPARG----ACEQMVRAAG-------LAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG 296 (374)
T ss_pred ecC-----CchHH----HHHHHHHHcC-------CcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC
Confidence 883 33333 3334444332 2334555553 6789999999999999999999999999999994
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hc
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CS 530 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~ 530 (832)
.|+|+|+.+|..+.+. .|++++|.|++++|++|.++++. ++.+....++.++++ ..
T Consensus 297 -------------------~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~ 356 (374)
T TIGR03088 297 -------------------LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQ 356 (374)
T ss_pred -------------------CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHh
Confidence 4699999999988883 38999999999999999999874 455556666777776 57
Q ss_pred CCHHHHHHHHHHHHHH
Q 045882 531 HDVAYWAHSFMQDLER 546 (832)
Q Consensus 531 ~~~~~W~~~~l~~l~~ 546 (832)
+++...++++.+-.++
T Consensus 357 fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 357 FSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8888888877765543
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=204.29 Aligned_cols=284 Identities=18% Similarity=0.168 Sum_probs=199.8
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhc-----CCc-hH-HHHHHHHhCCEEeecChhhHHHHHHH
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT-----LPV-RN-EILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~-----lp~-r~-~il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
|+|++|++....++..+.+.. ++++.+..|........... .+. +. .....+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARRL-GIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhhc-CCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 999999988777777666554 68888889975432111000 010 11 11234567999998887666655421
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK 352 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~ 352 (832)
.+ ....++.++|+|+|.+.|.+... ....+..+. ...++++|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~---~~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGR---AEARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccc---hhhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 11 01123678999999987754321 111111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcC
Q 045882 353 LLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAE 432 (832)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~AD 432 (832)
++|+..+.+++|+++ |+.+|....... .....+++.++++.+. .+-+.+.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELARELGV-------IDRVDFPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhcCC-------CceEEEeccCCHHHHHHHHHhCC
Confidence 999999988887765 888886542221 2223344555554322 22344567899999999999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHH
Q 045882 433 CCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDA 509 (832)
Q Consensus 433 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~a 509 (832)
++++||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|+++++++|.++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~G-------------------~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l 365 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMACG-------------------LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRL 365 (398)
T ss_pred EEEecccccccCcHHHHHHhcC-------------------CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHH
Confidence 9999999999999999999994 4699999999998882 48999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHH
Q 045882 510 ITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFM 541 (832)
Q Consensus 510 L~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 541 (832)
++. +++++...++.++++ ..++...+++.++
T Consensus 366 ~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 366 LTD-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 985 455555666667777 7788888887765
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-19 Score=201.20 Aligned_cols=281 Identities=18% Similarity=0.216 Sum_probs=195.1
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHH-HHhCCEEeecChhhHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKA-LLNADLIGFHTFDYARH 268 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~-ll~~dligf~t~~~~~~ 268 (832)
++++..+| |+|++|.+|..++..+++...+..++....|...+..-+ +..+.+- ...++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34556677 899999999988888888777777888888854322110 1111111 11234444444444444
Q ss_pred HHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccc
Q 045882 269 FLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDI 345 (832)
Q Consensus 269 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~ 345 (832)
|+... + -...++.++|+|+|...|... ......+++++ +++++++++||+.+
T Consensus 145 ~~~~~----~---------------~~~~~~~~i~ng~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK----A---------------FNANKSFVVYNGIDTDRFRKD------PARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc----C---------------CCcccEEEEccccchhhcCcc------hHHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 43210 0 012356778999998877532 11233455554 46789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 045882 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
.||+..+++|+.++.+++|+++ |+++|. +++.++ +.+.+.+.|.. ..|.++ +. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRAT----LERLIKALGLS------NRVKLL-GL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEEe-cc--cccHH
Confidence 9999999999999999888776 888873 233333 33344433211 124454 43 46899
Q ss_pred HHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHH
Q 045882 426 AYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVAD 504 (832)
Q Consensus 426 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ 504 (832)
.+|+.||++++||..||||++++|||+|+ .|+|+|+.+|..+.+ ++|+.++|.|++++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G-------------------~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACE-------------------LPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcC-------------------CCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 99999999999999999999999999994 469999999888888 4589999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 505 ALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
+|.++++.++..+..+.++.......++...+++.+++-.
T Consensus 319 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777777666665344456788888888877643
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.85 E-value=5e-20 Score=207.83 Aligned_cols=229 Identities=18% Similarity=0.228 Sum_probs=148.0
Q ss_pred hccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHH-HHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEE
Q 045882 575 KRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVL-RELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYL 650 (832)
Q Consensus 575 ~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i 650 (832)
..+.+.+|++|+||||++.. .++.++.....+| +++ .++|+.++++|||+...+.++...++ ...+|+.||+.|
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 45678899999999999832 1446776666655 777 67899999999999888877765543 334888899999
Q ss_pred EeCCCc----cEEEcCcccchhHHH-HHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcC
Q 045882 651 RWTKKS----EWETSTVAADFEWKR-ITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLAN 725 (832)
Q Consensus 651 ~~~~~~----~w~~~~~~~~~~w~~-~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~ 725 (832)
+..+.. .|.... +..|.. .+.+.+..+....+....+.+...+.+...+. .+.++...+.+.+..
T Consensus 83 ~~~~~~~~d~~w~~~l---~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~~ 152 (413)
T PLN02382 83 AYGESMVPDHGWVEYL---NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLEK 152 (413)
T ss_pred EeCCCCccChhHHHHH---hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHHh
Confidence 865421 121111 112321 11122222211111122233334444444321 123445555554533
Q ss_pred C--CEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEE
Q 045882 726 E--PVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACT 802 (832)
Q Consensus 726 ~--~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~ 802 (832)
. .+. +.+++.++||.|+++|||.|+++|++++...|++++++++|||+.||++||+.++. ++|+
T Consensus 153 ~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~-------------~gva 219 (413)
T PLN02382 153 RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV-------------YGVM 219 (413)
T ss_pred cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------CEEE
Confidence 2 333 46788999999999999999999999986568899999999999999999999982 2566
Q ss_pred eCCc----cc--------ccceEeC---ChhHHHHHHHHhh
Q 045882 803 VGQK----PS--------KARYYLD---DEEDVLALLKGLA 828 (832)
Q Consensus 803 vG~~----~s--------~A~y~l~---~~~eV~~~L~~l~ 828 (832)
||++ +. .|++++. ..++|.+.|+.+.
T Consensus 220 m~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~ 260 (413)
T PLN02382 220 VSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFN 260 (413)
T ss_pred EcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhC
Confidence 6664 22 2355542 4788999988763
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.8e-20 Score=211.25 Aligned_cols=204 Identities=13% Similarity=0.078 Sum_probs=136.5
Q ss_pred HHHHhhc---cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEe
Q 045882 570 IVDAYKR---TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAE 645 (832)
Q Consensus 570 i~~~y~~---s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liae 645 (832)
++..|.. .++|+|++|+||||++ .++.+++++.++|++| +++|+.|++||||+...+..++..++ ..++|++
T Consensus 404 ~~~~~~~~~~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 404 ARPSRLPSSGQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred hhcccCCCcCceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 3444544 3589999999999999 5566778899999999 68899999999999999999988876 3679999
Q ss_pred CCEEEEeCCC-------------ccEEEcCcccchhHHHHHHHHHHHHHhcCC----------ceEEeeccee-E-----
Q 045882 646 HGYYLRWTKK-------------SEWETSTVAADFEWKRITEPVMKLYTEATD----------GSYIEKKETA-L----- 696 (832)
Q Consensus 646 nGa~i~~~~~-------------~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~----------gs~ie~k~~~-l----- 696 (832)
||+.|+.+++ ..+.... ..+ .+.+.++++...+... ..++...... .
T Consensus 480 NGA~I~~~~~~~~~~~~~~~~~~~~iI~~~---~l~-~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~ 555 (694)
T PRK14502 480 NGGAIFIPKDYFRLPFAYDRVAGNYLVIEL---GMA-YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSR 555 (694)
T ss_pred CCCEEEECCCcccccccccccCCCeEEEEc---CCC-HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHH
Confidence 9999998654 1111111 111 2445555554443211 1111110000 0
Q ss_pred --EEEe---ccCC-CC----CCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcce
Q 045882 697 --VWHY---QDAA-PG----FGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDF 766 (832)
Q Consensus 697 --~~~~---~~ad-~~----~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~ 766 (832)
.... +.+. .+ +......+.++.+...+.+..+.+..++.++||. .++|||.|+++|++.+ |++.++
T Consensus 556 ~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~e 631 (694)
T PRK14502 556 LTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGN 631 (694)
T ss_pred hhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccc
Confidence 0000 0000 00 0000112334445554544466677799999999 5999999999999999 898899
Q ss_pred EEEE--eCChhhHHHHHHccc
Q 045882 767 VLCV--GDDRSDEDMFESISQ 785 (832)
Q Consensus 767 vl~~--GDd~ND~~Mf~~a~~ 785 (832)
+++| ||+.||++||++++.
T Consensus 632 ViafalGDs~NDisMLe~Ag~ 652 (694)
T PRK14502 632 IHTFGLGDSENDYSMLETVDS 652 (694)
T ss_pred eEEEEcCCcHhhHHHHHhCCc
Confidence 9999 999999999999985
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=211.10 Aligned_cols=300 Identities=14% Similarity=0.113 Sum_probs=200.3
Q ss_pred ccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCCh---hhhhc---CCc
Q 045882 171 RFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS---EIYRT---LPV 244 (832)
Q Consensus 171 ~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~---e~~r~---lp~ 244 (832)
.|..-.|....-..-.|. .+...+ |+.|+|++|......++..+.++..+.|+.+..|--+|.. ++... .+.
T Consensus 148 ~~~~~~~~~~~~~~~l~~-~l~~~~-~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~ 225 (475)
T cd03813 148 SFVDYFWTVRNMLSPLLA-AIARPL-PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSY 225 (475)
T ss_pred CHHHHHHHHHHHHHHHHH-HhccCC-CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHH
Confidence 354555543332323322 233333 3459999998766666666655566899999999755421 22211 000
Q ss_pred -hHH-------HH-HHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhc
Q 045882 245 -RNE-------IL-KALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESAL 315 (832)
Q Consensus 245 -r~~-------il-~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~ 315 (832)
+.. +. ..+-.||.|...+....+ .+. .++....++.++|+|||.+.|.+..
T Consensus 226 ~~~~~~~~~~~l~~~~~~~ad~Ii~~s~~~~~-~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~ 285 (475)
T cd03813 226 FRRLWIRFFESLGRLAYQAADRITTLYEGNRE-RQI-------------------EDGADPEKIRVIPNGIDPERFAPAR 285 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEecCHHHHH-HHH-------------------HcCCCHHHeEEeCCCcCHHHcCCcc
Confidence 111 11 122356666554432222 111 1111233677899999999886421
Q ss_pred CCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHH
Q 045882 316 NHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYT 395 (832)
Q Consensus 316 ~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~ 395 (832)
. . ....++++|+++||+.+.||+..+++|+..+.++.|+++ |+++|... +..++.+++++
T Consensus 286 ~-----~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~ 345 (475)
T cd03813 286 R-----A------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRE 345 (475)
T ss_pred c-----c------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHH
Confidence 1 0 112467899999999999999999999999999888876 88887432 22355667777
Q ss_pred HHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCce
Q 045882 396 ITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSM 475 (832)
Q Consensus 396 lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~ 475 (832)
++++.|.. ..|.++ + .+++..+|+.||++|+||..|||+++++|||||+ .|
T Consensus 346 li~~l~l~------~~V~f~-G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G-------------------~P 396 (475)
T cd03813 346 LVESLGLE------DNVKFT-G---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG-------------------IP 396 (475)
T ss_pred HHHHhCCC------CeEEEc-C---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC-------------------CC
Confidence 77776532 125554 4 6789999999999999999999999999999994 46
Q ss_pred EEeccCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc-CCHHHHHHHHHH
Q 045882 476 LVISEFIGCSPSL-S--------GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS-HDVAYWAHSFMQ 542 (832)
Q Consensus 476 lV~Se~~G~s~~l-~--------~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~ 542 (832)
+|+|+.+|+.+.+ . .|++++|.|++++|++|.++++. ++.++...++.++++.+ ++....+++|.+
T Consensus 397 VVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 397 VVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999998887 3 48999999999999999999984 45566666667777766 455666665544
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=204.44 Aligned_cols=273 Identities=15% Similarity=0.101 Sum_probs=181.3
Q ss_pred hCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcC-------------CchH--HH-----------
Q 045882 195 INPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTL-------------PVRN--EI----------- 248 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~l-------------p~r~--~i----------- 248 (832)
.+| |+|..| +-...+-.+.+.++++|+++++|-|.-+++.+..+ ..+. .+
T Consensus 106 ~~p--Dv~i~~--~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~ 181 (419)
T cd03806 106 LVP--DIFIDT--MGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAF 181 (419)
T ss_pred cCC--CEEEEc--CCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHH
Confidence 357 755544 32333334556677899999999443344443221 1111 11
Q ss_pred --HHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHH
Q 045882 249 --LKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKE 326 (832)
Q Consensus 249 --l~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~ 326 (832)
...+-.||.|-..+....+++.+ ..+ ...++.++|+|+|++.|.+.. .
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~----~~~----------------~~~~~~vi~~gvd~~~~~~~~---~------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRS----LWK----------------RNTKPSIVYPPCDVEELLKLP---L------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHH----HhC----------------cCCCcEEEcCCCCHHHhcccc---c-------
Confidence 11244677777766544444432 111 112567789999998775321 0
Q ss_pred HHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCcc-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC
Q 045882 327 IREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQ-GKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG 405 (832)
Q Consensus 327 l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~ 405 (832)
....++.+|++++|+.+.||+...|+||.++.+++|+.. .++.|+++|.... .+..++.+++++++++.+.
T Consensus 232 --~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~l--- 303 (419)
T cd03806 232 --DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELGL--- 303 (419)
T ss_pred --ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhCC---
Confidence 012456799999999999999999999999999888631 2466888885321 1122355666666666532
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccc
Q 045882 406 VPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCS 485 (832)
Q Consensus 406 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s 485 (832)
...+.+.+.++.+++..+|+.||++|.||..||||++++|||||+ .|+|+|..+|..
T Consensus 304 ----~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G-------------------~pvIa~~~ggp~ 360 (419)
T cd03806 304 ----EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG-------------------LIPLAHASGGPL 360 (419)
T ss_pred ----CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC-------------------CcEEEEcCCCCc
Confidence 223344568999999999999999999999999999999999994 468899887865
Q ss_pred cc-CC------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHH
Q 045882 486 PS-LS------GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVA 534 (832)
Q Consensus 486 ~~-l~------~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~ 534 (832)
+. +. .|++++ |++++|++|.+++++++++++.+.++.++....++..
T Consensus 361 ~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 361 LDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred hheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 43 33 378873 9999999999999998877766544444444545543
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.7e-19 Score=202.31 Aligned_cols=288 Identities=10% Similarity=0.062 Sum_probs=186.3
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeE-EEEecCCCCChhhhhcCCchHHHH----HHHHhCCEEeecChhh
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKL-GFFLHSPFPSSEIYRTLPVRNEIL----KALLNADLIGFHTFDY 265 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~i-g~flH~PfP~~e~~r~lp~r~~il----~~ll~~dligf~t~~~ 265 (832)
++...+| |+|+.|++...++..+..... .+++ ....|. ++... +..++ +.+..++++.-.+. +
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~ 342 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-F 342 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-h
Confidence 4455567 899999999877766665554 3444 444565 33211 12221 12344455433232 3
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEecccc
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMD 344 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRld 344 (832)
..+.....+.+.. .++-...+|.++|+|||+.+|.+....+ ...+..++..+ .+.++|++|+|+.
T Consensus 343 v~~s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~ 408 (578)
T PRK15490 343 MSNNHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFV 408 (578)
T ss_pred hhccHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEe
Confidence 3333322222110 0011234678899999999886532111 11122222223 3457899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 045882 345 IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEK 424 (832)
Q Consensus 345 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el 424 (832)
+.||+..+++|+.++++++|+++ |+++|. |+.. +++++++++.+.. ..|+|++ . .+++
T Consensus 409 ~~Kg~~~LI~A~a~llk~~pdir----LvIVGd-----G~~~----eeLk~la~elgL~------d~V~FlG-~--~~Dv 466 (578)
T PRK15490 409 GDKNPFAWIDFAARYLQHHPATR----FVLVGD-----GDLR----AEAQKRAEQLGIL------ERILFVG-A--SRDV 466 (578)
T ss_pred hhcCHHHHHHHHHHHHhHCCCeE----EEEEeC-----chhH----HHHHHHHHHcCCC------CcEEECC-C--hhhH
Confidence 99999999999999999999876 888883 3433 3444555443321 1255554 3 5789
Q ss_pred HHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--CceEeCCCCHHH
Q 045882 425 TAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--GAIRVNPWDIDA 501 (832)
Q Consensus 425 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--~a~~VnP~d~~~ 501 (832)
..+|+.||+||+||.+||||++++|||+|+ .|+|+|..+|+.+.+ + +|++|+|.|.++
T Consensus 467 ~~~LaaADVfVlPS~~EGfp~vlLEAMA~G-------------------lPVVATdvGG~~EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 467 GYWLQKMNVFILFSRYEGLPNVLIEAQMVG-------------------VPVISTPAGGSAECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred HHHHHhCCEEEEcccccCccHHHHHHHHhC-------------------CCEEEeCCCCcHHHcccCCcEEEECCCChhh
Confidence 999999999999999999999999999994 479999999999887 2 489999999999
Q ss_pred HHHHHHHHhcCCH--HHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHH
Q 045882 502 VADALHDAITMSD--VEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 502 ~A~ai~~aL~m~~--~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 545 (832)
+++++..+..+.. ..+....++.++++ ..++....++.+++.+.
T Consensus 528 La~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 528 LDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 9998854433222 22333445667766 45888888888776654
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=189.07 Aligned_cols=191 Identities=19% Similarity=0.163 Sum_probs=123.4
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC-CC--ceEEEeCCEEEEeCCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC-EN--LGIAAEHGYYLRWTKK 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~~--l~liaenGa~i~~~~~ 655 (832)
++++++|+||||++ .++.+++++.++|++| ++. +.|+++|||+...+.+.|+.. .. .++|++||+++...++
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 45677999999998 6788999999999999 455 999999999999998888764 21 4789999999986543
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhc--------CCceEEeecceeEEEE--eccCCCC---------CCchhHHHHH
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEA--------TDGSYIEKKETALVWH--YQDAAPG---------FGSCQAKELL 716 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~--------~~gs~ie~k~~~l~~~--~~~ad~~---------~~~~~a~el~ 716 (832)
..+...++. .++ .+.+.++++...+. ..+.+++..+...... +.+.... .......++.
T Consensus 82 ~i~~~~l~~-~l~-~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 159 (245)
T PLN02423 82 LIGTQSLKS-FLG-EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMV 159 (245)
T ss_pred EEEEecccc-cCC-HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHH
Confidence 333322211 111 24455555443221 1244444332222111 1111000 0011123344
Q ss_pred HHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHHcc
Q 045882 717 DHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFESIS 784 (832)
Q Consensus 717 ~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~a~ 784 (832)
..+.+.+.+..+. ..+|..++||+|+|+|||.|++.|+ ++++|++||| +.||++||+.-+
T Consensus 160 ~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~ 224 (245)
T PLN02423 160 SVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESER 224 (245)
T ss_pred HHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCC
Confidence 4444444332333 2345689999999999999999996 5799999999 899999999754
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.83 E-value=4e-19 Score=198.12 Aligned_cols=274 Identities=17% Similarity=0.112 Sum_probs=190.1
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCC----CChhhhhcCCchHHHH-HHHHhCCEEeecChhh
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPF----PSSEIYRTLPVRNEIL-KALLNADLIGFHTFDY 265 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf----P~~e~~r~lp~r~~il-~~ll~~dligf~t~~~ 265 (832)
+++..+| |+|++|+.+..+....+.++ .++++.+.+|.-. +.............+. ..+-.+|.+-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4566677 89999977654444444333 4678888888422 1111111000111222 2345678888877655
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccc
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDI 345 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~ 345 (832)
.+.+... +. ...++.++|+|+|.+.+.+.. ...+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 5544321 21 123566799999988775321 0134678999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 045882 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
.||+..+++|+..+.+++|+++ |+++|. ++.. +++++++++.+ ..+.+.+.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~~~-------~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARALG-------LGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHHcC-------CCCeEEECCCCCHHHHH
Confidence 9999999999999998888766 888873 3322 34444544432 12234556789999999
Q ss_pred HHHHhcCcceeccc------ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCC
Q 045882 426 AYYALAECCIVNAV------RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNP 496 (832)
Q Consensus 426 aly~~ADv~vvtS~------~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP 496 (832)
.+|+.||++|+||. .||||++++|||+|+ .|+|+|+.+|..+.+. .|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G-------------------~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASG-------------------VPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcC-------------------CCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 599999999999994 4799999999988772 4899999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHH
Q 045882 497 WDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFM 541 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 541 (832)
.|+++++++|.++++. ++.+.....+.++++ ..+++..+++.+.
T Consensus 321 ~d~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 9999999999999884 445555566667776 4688888877664
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-19 Score=197.83 Aligned_cols=264 Identities=13% Similarity=0.092 Sum_probs=177.9
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHH-HHHHHhCCEEeecChhhHHHH
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEI-LKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~i-l~~ll~~dligf~t~~~~~~F 269 (832)
+.+..++ |+|++|..+...++.++.++.....+.+..|..+...+.+........+ ...+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3344555 8999999987777777766666666677788776544332221111001 112334566655554443333
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEecccccc
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIF 346 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~ 346 (832)
... ....++.++|+|+|...+.... ..... ++++ .++.+|+++||+++.
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~~---~~~~~----~~~~~~~~~~~~i~~vGr~~~~ 204 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFNE---EIRKK----RRELGILEDKFVIGHVGRFSEQ 204 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCCc---hhhhH----HHHcCCCCCCEEEEEEeccccc
Confidence 210 0123577899999998875321 11111 2222 578899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
||+..+++|+..+.+++|+++ |+.+|. ++..+.+++. +++. +.. ..|.+++ . .+++..
T Consensus 205 Kg~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~----~~~~----~~~--~~v~~~g-~--~~~~~~ 262 (358)
T cd03812 205 KNHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKK----VKEL----GLE--DKVIFLG-V--RNDVPE 262 (358)
T ss_pred cChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHH----HHhc----CCC--CcEEEec-c--cCCHHH
Confidence 999999999999999998876 888873 3333333333 3322 211 1255544 4 678999
Q ss_pred HHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC--CceEeCCCCHHHHHH
Q 045882 427 YYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS--GAIRVNPWDIDAVAD 504 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--~a~~VnP~d~~~~A~ 504 (832)
+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+. ++++..+.+++++|+
T Consensus 263 ~~~~adi~v~ps~~E~~~~~~lEAma~G-------------------~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~ 323 (358)
T cd03812 263 LLQAMDVFLFPSLYEGLPLVLIEAQASG-------------------LPCILSDTITKEVDLTDLVKFLSLDESPEIWAE 323 (358)
T ss_pred HHHhcCEEEecccccCCCHHHHHHHHhC-------------------CCEEEEcCCchhhhhccCccEEeCCCCHHHHHH
Confidence 9999999999999999999999999994 5799999999988884 355666667899999
Q ss_pred HHHHHhcCCHHHHHHHHHHHH
Q 045882 505 ALHDAITMSDVEKQLRHEKHY 525 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~ 525 (832)
+|.++++.++..+..+..+..
T Consensus 324 ~i~~l~~~~~~~~~~~~~~~~ 344 (358)
T cd03812 324 EILKLKSEDRRERSSESIKKK 344 (358)
T ss_pred HHHHHHhCcchhhhhhhhhhc
Confidence 999999988766554433333
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-19 Score=196.92 Aligned_cols=269 Identities=17% Similarity=0.209 Sum_probs=191.7
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHH
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~ 271 (832)
++..+| |+|++|..+...+..++.+. .++++.+.+|-.++....+ . ..+..+|.+.+.+....+.+.
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~------~---~~~~~~~~vi~~s~~~~~~~~- 140 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFRY------N---AIMARGDRVIAVSNFIADHIR- 140 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHHH------H---HHHHhcCEEEEeCHHHHHHHH-
Confidence 344566 89999988766555555443 4789999999766543211 1 224568888776654444443
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCC
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKG 348 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KG 348 (832)
...+. ...++.++|+|+|...|...... ......+++++ .++++++++||+.+.||
T Consensus 141 ---~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 141 ---ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ---HhcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 11221 12357779999999887543211 11222245554 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 045882 349 ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYY 428 (832)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly 428 (832)
+..+++|+..+.+++|+++ |+.+|... ..+.+.+++.+.+.+.+.. ..|.+++ . .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTFVG-H--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEEcC-C--cccHHHHH
Confidence 9999999999988777665 88888542 2233444555454443211 1255544 4 77899999
Q ss_pred HhcCcceecc-cccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHH
Q 045882 429 ALAECCIVNA-VRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (832)
Q Consensus 429 ~~ADv~vvtS-~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ 504 (832)
+.||++++|| ..||||++.+|||+|+ .|+|+|..+|..+.+. .|++++|.|++++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~ 322 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAMG-------------------RPVIASDHGGARETVRPGETGLLVPPGDAEALAQ 322 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhcC-------------------CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHH
Confidence 9999999999 7899999999999994 4699999988887773 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhhcC
Q 045882 505 ALHDAITMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (832)
+|..++..+++++.+..++.++++.++
T Consensus 323 ~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 323 ALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 999888888888888888888887654
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-18 Score=193.96 Aligned_cols=285 Identities=12% Similarity=0.132 Sum_probs=194.0
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcC---CCeEEEEecCCCCChhhhhcCCc-hHHHHHHHHhCCEEee
Q 045882 185 KVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFH---RVKLGFFLHSPFPSSEIYRTLPV-RNEILKALLNADLIGF 260 (832)
Q Consensus 185 ~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~---~~~ig~flH~PfP~~e~~r~lp~-r~~il~~ll~~dligf 260 (832)
+.+.+.+ +..+| |+|++|.+....++.++.++.. +.++.+.+|..-.. ....-+. +.-+...+-.+|.|..
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 4444443 45566 8999998876666666654332 67888888843111 1111121 2223345667999998
Q ss_pred cChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEE
Q 045882 261 HTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVI 337 (832)
Q Consensus 261 ~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vi 337 (832)
.+......+... .+ ...++.++|+|+|...+.+.. . ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~----~~----------------~~~~i~vi~n~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYEL----FD----------------ITKEIEVIPNFVDEDRFRPKP-----D---EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHh----cC----------------CcCCEEEecCCcCHhhcCCCc-----h---HHHHHhcCCCCCCeEE
Confidence 888766655421 11 112467799999987764211 1 1223333 478899
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecC
Q 045882 338 VGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDR 417 (832)
Q Consensus 338 l~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~ 417 (832)
++++|+.+.||+..+++|++++.++ ++++ |+.+|.+ ++..+++ +++.+.+ ..+ .|.+++
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~g-----~~~~~~~----~~~~~~~----~~~--~v~~~g- 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGDG-----PERSPAE----RLARELG----LQD--DVLFLG- 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcCC-----cCHHHHH----HHHHHcC----CCc--eEEEec-
Confidence 9999999999999999999988655 3344 7777743 3333333 3333322 111 255554
Q ss_pred CCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEe
Q 045882 418 PVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRV 494 (832)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~V 494 (832)
. .+++..+|+.||++|+||..||||++++|||+|+ .|+|+|+.+|..+.+. .|+++
T Consensus 260 ~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-------------------~PvI~s~~~~~~e~i~~~~~G~~~ 318 (371)
T cd04962 260 K--QDHVEELLSIADLFLLPSEKESFGLAALEAMACG-------------------VPVVASNAGGIPEVVKHGETGFLV 318 (371)
T ss_pred C--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-------------------CCEEEeCCCCchhhhcCCCceEEc
Confidence 3 4579999999999999999999999999999994 4699999999988883 48999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-hhcCCHHHHHHHHHHHHH
Q 045882 495 NPWDIDAVADALHDAITMSDVEKQLRHEKHYRY-ICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 545 (832)
+|.|+++++++|.++++. ++++....++.+++ ...++....++.+++-++
T Consensus 319 ~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 319 DVGDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999974 44555555666666 566888888887776554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-19 Score=212.10 Aligned_cols=281 Identities=12% Similarity=0.109 Sum_probs=181.0
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEE-EecCCCC---ChhhhhcCCchHHHHHHHHhCCEEeecC-hhh-
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGF-FLHSPFP---SSEIYRTLPVRNEILKALLNADLIGFHT-FDY- 265 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~-flH~PfP---~~e~~r~lp~r~~il~~ll~~dligf~t-~~~- 265 (832)
++..+| |+|++|++.-.++..+..+.. .+++.+ .+|. +| ..+.++. ....+.+.+..++.+.+-+ ..+
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344456 999999999888777776544 455544 4564 22 1121110 0111223333444333322 122
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEecccc
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMD 344 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRld 344 (832)
.+.+.. .++. ...+|.++|+|||...|.+ .+........++... .+.++|++|+|++
T Consensus 470 ~~~l~~----~~g~---------------~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLGV---------------DERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcCC---------------ChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 222221 1121 2346788999999888752 121111122222222 3467899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 045882 345 IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEK 424 (832)
Q Consensus 345 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el 424 (832)
+.||+..+++||.++++++|+++ |+++|.+ +. ++++++++++.+. ...+.+.+.. .++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~G-----~~----~~~L~~l~~~lgL-------~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGGG-----PL----LESVREFAQRLGM-------GERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEccC-----cc----hHHHHHHHHHcCC-------CCcEEEcCCc--chH
Confidence 99999999999999999999876 9988843 33 2345555555432 2334455554 479
Q ss_pred HHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCH--
Q 045882 425 TAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDI-- 499 (832)
Q Consensus 425 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~-- 499 (832)
..+|+.||++|+||.+|||+++++|||+|+ .|+|+|..+|+.+.+. +|++|+|.|.
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G-------------------~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFSG-------------------VPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHcC-------------------CeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 999999999999999999999999999994 4799999999988883 4899998885
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHH
Q 045882 500 DAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQ 542 (832)
Q Consensus 500 ~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~ 542 (832)
++++++|.+++....... ...++.++++ ..++....++.+++
T Consensus 647 ~~La~aL~~ll~~l~~~~-~l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 647 PDVAEALARIHDMCAADP-GIARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHHHhChhccH-HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 589999998887543322 2234556655 46777776666654
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=196.18 Aligned_cols=280 Identities=14% Similarity=0.107 Sum_probs=183.8
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHH---------HHHHhCCEEeecChhhHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEIL---------KALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il---------~~ll~~dligf~t~~~~~~F 269 (832)
.|+|++|+..... + +++... ..++.|..| ||......--..-..+. ..+-.+|.|...+......+
T Consensus 95 ~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSACV-P-LLKLFS-PSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchHH-H-HHHHhc-CCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 4999999866432 2 233322 388999999 44332111001111111 12345777777665444433
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
... ++.. ....+.++|+|+|.+.|.+....+ ..+......++.+++++||+.+.||+
T Consensus 170 ~~~----~~~~--------------~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KKT----FPSL--------------AKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HHH----hccc--------------ccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 221 1100 011235789999998886432110 11111122577899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHH-HhcccCCCCcccEEEecCCCCHHHHH
Q 045882 350 SLKLLAMEQLLKVH---PELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKR-INETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 350 ~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~-iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
..+++|++++.+++ |+++ |+.+|.+... .++..++.+++++++++ .+. ..-+.+.+.++.+++.
T Consensus 227 ~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l-------~~~V~f~g~~~~~~~~ 294 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEELLLL-------EDQVIFLPSISDSQKE 294 (392)
T ss_pred HHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHhcCC-------CceEEEeCCCChHHHH
Confidence 99999999998887 6655 8888864321 12233455666666655 321 2233445689999999
Q ss_pred HHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHH
Q 045882 426 AYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAV 502 (832)
Q Consensus 426 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~ 502 (832)
.+|+.||++++||..||||++++|||+|+ .|+|+|+.+|..+.+. .|++++| |++++
T Consensus 295 ~~l~~ad~~l~~s~~E~~g~~~lEAma~G-------------------~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~ 354 (392)
T cd03805 295 LLLSSARALLYTPSNEHFGIVPLEAMYAG-------------------KPVIACNSGGPLETVVDGETGFLCEP-TPEEF 354 (392)
T ss_pred HHHhhCeEEEECCCcCCCCchHHHHHHcC-------------------CCEEEECCCCcHHHhccCCceEEeCC-CHHHH
Confidence 99999999999999999999999999994 4799999999888773 3788877 99999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHH
Q 045882 503 ADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHS 539 (832)
Q Consensus 503 A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~ 539 (832)
|++|.++++.++ .++...++.++++ ..++...++++
T Consensus 355 a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 355 AEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 999999998654 4555566667766 44676666554
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-18 Score=197.16 Aligned_cols=313 Identities=13% Similarity=0.117 Sum_probs=205.1
Q ss_pred ccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcc-cccHHHHHHhhcCCCeEEE
Q 045882 149 FCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYH-LMVLPTFLRRRFHRVKLGF 227 (832)
Q Consensus 149 f~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyh-l~llp~~lr~~~~~~~ig~ 227 (832)
+-..-.||-||.... .=+..|.++..+.+ +. |.|||---= ..-+| ++| +...|++|
T Consensus 109 ~~~~~~~~~~t~~~~--------~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIGQ--------SLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHHH--------HHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 345566777776532 23567777765543 12 347774221 12223 344 34789999
Q ss_pred EecCCCCChhhhhcCCc-------------------hHHH-------HH--HHHhCCEEeecChhhHHHHHHHHHHHhCC
Q 045882 228 FLHSPFPSSEIYRTLPV-------------------RNEI-------LK--ALLNADLIGFHTFDYARHFLSCCSRMLGL 279 (832)
Q Consensus 228 flH~PfP~~e~~r~lp~-------------------r~~i-------l~--~ll~~dligf~t~~~~~~Fl~~~~r~l~~ 279 (832)
.+|-|--+.+....+-. .+.+ +. .+-.+|.|...+....+++.+ ..+
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~~- 240 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LWR- 240 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----HcC-
Confidence 99966545433322100 0000 10 123567777665544444432 111
Q ss_pred cccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHH
Q 045882 280 DYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQL 359 (832)
Q Consensus 280 ~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~l 359 (832)
...++.++++|+|...+... +. ....+++++++|+|+.+.||+..+|+||.++
T Consensus 241 ---------------~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 241 ---------------IPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred ---------------CCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 11245678889998766321 10 0113457899999999999999999999999
Q ss_pred HHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceeccc
Q 045882 360 LKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAV 439 (832)
Q Consensus 360 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~ 439 (832)
+++.++-..++.|+++|... .++..++.+++++++++.+.. + .|.| .+.++.+++.++|+.||++|.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~L~----~--~V~f-~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELGLD----G--DVEF-HKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcCCC----C--cEEE-eCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87543211234599998642 122233445666666554321 1 2554 568999999999999999999999
Q ss_pred ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C------CceEeCCCCHHHHHHHHHHHhcC
Q 045882 440 RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S------GAIRVNPWDIDAVADALHDAITM 512 (832)
Q Consensus 440 ~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~------~a~~VnP~d~~~~A~ai~~aL~m 512 (832)
.||||++++|||||+ .|+|++..+|..+.+ . .|++++ |++++|++|.+++++
T Consensus 364 ~E~FGivvlEAMA~G-------------------~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~ 422 (463)
T PLN02949 364 DEHFGISVVEYMAAG-------------------AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRM 422 (463)
T ss_pred cCCCChHHHHHHHcC-------------------CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhC
Confidence 999999999999994 469999988875433 1 267764 999999999999998
Q ss_pred CHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 513 SDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 513 ~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
+++++++..++.++.+.+++....++++++.+...
T Consensus 423 ~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 423 RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 88888777778888888899998888888777654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-19 Score=186.12 Aligned_cols=189 Identities=18% Similarity=0.145 Sum_probs=121.9
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCC----
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKK---- 655 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~---- 655 (832)
+|++|+||||++ .+. +++++.++|++| ++.|+.++++|||++..+.+++.+++ ..++|++||+.|+.+.+
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999998 333 456799999999 67899999999999999999888776 45899999999998642
Q ss_pred ---------c--cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEee---cc----eeEEEEe------ccCCCCCCchh
Q 045882 656 ---------S--EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEK---KE----TALVWHY------QDAAPGFGSCQ 711 (832)
Q Consensus 656 ---------~--~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~---k~----~~l~~~~------~~ad~~~~~~~ 711 (832)
. .+...++ .+.++++++...+..+-.+... .. ..+.... +.....+...
T Consensus 76 ~~~~~~~~~~~~i~~~~l~------~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~- 148 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKP------VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLW- 148 (225)
T ss_pred cccccccCCCeEEEEcCCC------HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCC-
Confidence 1 2333222 3445555554443222111000 00 0000000 0000000000
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCC--CcceEEEEeCChhhHHHHHHccc
Q 045882 712 AKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGK--LPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 712 a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi--~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
..+....+.+.+....+.+..+..++++ ++++|||.|++.+++.+ ++ +...+++|||+.||++||+.++.
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~s~~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 149 SREGWEAILVTARARGLKYTHGGRFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred CHHHHHHHHHHHHHcCCcEEECCEEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 1122222322233345666777777886 55999999999999987 65 56689999999999999999985
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=192.18 Aligned_cols=275 Identities=16% Similarity=0.139 Sum_probs=197.7
Q ss_pred hCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCCh--hhhhc---CCchHHHHHHHHhCCEEeecChhhHHHH
Q 045882 195 INPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS--EIYRT---LPVRNEILKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~--e~~r~---lp~r~~il~~ll~~dligf~t~~~~~~F 269 (832)
.++ |+||+|.+..... +....++.+.+|-.+|.. ..+.. ...+..+...+..+|.+.+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 445 9999998887766 456789999999765432 11111 1123334456778899998887666666
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
.+.. +. ...++.++|+|+|...+.... ... ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPPA-----EAE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCCc-----hHH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 4321 11 122566799999988765321 111 1122223578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|+..+.+++|+++ |+.+|... .........+ .+. + ....+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~----~---~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----REL----G---LGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHc----C---CCCeEEECCCCChhHHHHHHh
Confidence 999999999999888655 88887432 1111222222 111 1 233555678999999999999
Q ss_pred hcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHH
Q 045882 430 LAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 430 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~ 508 (832)
.||++++||..||+|++++|||+|+ .|+|+|+.+|..+.+ .+++.++|.|.++++++|.+
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~G-------------------~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 332 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMACG-------------------TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIER 332 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcCC-------------------CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHH
Confidence 9999999999999999999999994 468999998888777 46899999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 541 (832)
+++ .++.+....++.++++..+++..++++++
T Consensus 333 l~~-~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 333 LLE-DPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred Hhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 987 45555556666778888899999988775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.8e-18 Score=195.09 Aligned_cols=271 Identities=14% Similarity=0.066 Sum_probs=179.8
Q ss_pred CCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChh-hhhcC----CchHHHHHHHHhCCEEeecChhhHHHHHHH
Q 045882 198 EEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSE-IYRTL----PVRNEILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 198 ~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e-~~r~l----p~r~~il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
+.|++.++--+.... . +.+..+.+++...+|.-.-+.. .-... +.-+..++.+-.+|.|...|....+.....
T Consensus 211 ~~di~i~dr~~~~~~-~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIGQ-A-VLENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccch-H-HHhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 358998875554443 3 4456678999999995431110 00000 111222333445677777666444333221
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK 352 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~ 352 (832)
... +.+...+|.++|+|++...+. +. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEEEeccccccCHHHH
Confidence 111 112233567889998754332 10 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcC
Q 045882 353 LLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAE 432 (832)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~AD 432 (832)
++|+.++.+++|+++ |+++|. |++. +++++++++.+.. + .|.+ .|+. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~f-~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQAQ----D--YIHL-KGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcCCC----C--eEEE-cCCC---CHHHHHHhCC
Confidence 999999999999876 888873 3433 3455555543221 1 2444 4443 6788999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCc-cccccC-C--CceEeCC----CC----HH
Q 045882 433 CCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFI-GCSPSL-S--GAIRVNP----WD----ID 500 (832)
Q Consensus 433 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~s~~l-~--~a~~VnP----~d----~~ 500 (832)
++|+||.+||||++++|||||+ .|+|+|... |..+.+ + +|++|++ .| ++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G-------------------~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~ 455 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSG-------------------LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIIT 455 (500)
T ss_pred EEEEcCccccccHHHHHHHHhC-------------------CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHH
Confidence 9999999999999999999994 469999986 677766 2 4899974 33 89
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 501 AVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
++|++|.++++ +++++...++.++....++...-++.+.+-++
T Consensus 456 ~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 456 ALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 99999999994 44566667777888888888877777776554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.7e-18 Score=186.64 Aligned_cols=268 Identities=15% Similarity=0.141 Sum_probs=189.8
Q ss_pred HHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHH
Q 045882 193 EVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 193 ~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
+..++ |+|++|..+...+..++..+....+..+.+|.+-.... +....+.+.+-.+|.+-..+....+.+.+.
T Consensus 76 ~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~ 148 (355)
T cd03799 76 RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL 148 (355)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 34455 99999987666666666666667888888885422111 111233445667999998888776665431
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK 352 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~ 352 (832)
.+ ....++.++|+|+|.+.+.... .....++..|+++||+.+.||+..+
T Consensus 149 ----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l 197 (355)
T cd03799 149 ----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYL 197 (355)
T ss_pred ----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHH
Confidence 11 1233677899999988775321 1122467789999999999999999
Q ss_pred HHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcC
Q 045882 353 LLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAE 432 (832)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~AD 432 (832)
++|++++.+++|+++ |+.+|.. +... ++.+.+++.+ ..+.+.+.+.++.+++.++|+.||
T Consensus 198 ~~~~~~l~~~~~~~~----l~i~G~~-----~~~~----~~~~~~~~~~-------~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 198 LEALALLKDRGIDFR----LDIVGDG-----PLRD----ELEALIAELG-------LEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred HHHHHHHhhcCCCeE----EEEEECC-----ccHH----HHHHHHHHcC-------CCCeEEECCcCChHHHHHHHHhCC
Confidence 999999988777655 8888743 2222 3333333332 223455677899999999999999
Q ss_pred cceecccc------cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHH
Q 045882 433 CCIVNAVR------DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVA 503 (832)
Q Consensus 433 v~vvtS~~------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A 503 (832)
++++||.. ||||++++|||+|+ .|+|+|..+|..+.+. .|++++|.|+++++
T Consensus 258 i~l~~s~~~~~~~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~ 318 (355)
T cd03799 258 LFVLPSVTAADGDREGLPVVLMEAMAMG-------------------LPVISTDVSGIPELVEDGETGLLVPPGDPEALA 318 (355)
T ss_pred EEEecceecCCCCccCccHHHHHHHHcC-------------------CCEEecCCCCcchhhhCCCceEEeCCCCHHHHH
Confidence 99999999 99999999999994 4689999888777663 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhhh-cCCHHHHHH
Q 045882 504 DALHDAITMSDVEKQLRHEKHYRYIC-SHDVAYWAH 538 (832)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~ 538 (832)
++|.++++.++. +....+..++++. .++....++
T Consensus 319 ~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 319 DAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 999999986543 4445555566654 455554443
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.9e-18 Score=190.96 Aligned_cols=282 Identities=15% Similarity=0.123 Sum_probs=191.3
Q ss_pred CCEEEEeCcccccH-HHHHHhhcCCCeEEEEecCCCCChhhhhc-C--CchHH----HH-HHHHhCCEEeecChhhHHHH
Q 045882 199 EDYVWIHDYHLMVL-PTFLRRRFHRVKLGFFLHSPFPSSEIYRT-L--PVRNE----IL-KALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 199 ~d~vwvhDyhl~ll-p~~lr~~~~~~~ig~flH~PfP~~e~~r~-l--p~r~~----il-~~ll~~dligf~t~~~~~~F 269 (832)
.|+||+|...+... ..++-.+.-+.++.+.+|--||..-+-.. . +.... +. ..+-.+|.|...+....+.+
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~ 186 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA 186 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH
Confidence 39999998665432 22332333456777777755543211100 1 00011 11 12446888888887666655
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEecccccc
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIF 346 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~ 346 (832)
.+ .+. ...++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.
T Consensus 187 ~~-----~~~---------------~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~ 241 (412)
T PRK10307 187 RE-----KGV---------------AAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEK 241 (412)
T ss_pred HH-----cCC---------------CcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccc
Confidence 32 111 2236778999999988763211 1123455555 357899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
||+..+++|++++ +++|+++ |+++|. |++.+ ++++++++.+ ...|.+ .+.++.+++..
T Consensus 242 kg~~~li~a~~~l-~~~~~~~----l~ivG~-----g~~~~----~l~~~~~~~~-------l~~v~f-~G~~~~~~~~~ 299 (412)
T PRK10307 242 QGLELVIDAARRL-RDRPDLI----FVICGQ-----GGGKA----RLEKMAQCRG-------LPNVHF-LPLQPYDRLPA 299 (412)
T ss_pred cCHHHHHHHHHHh-ccCCCeE----EEEECC-----ChhHH----HHHHHHHHcC-------CCceEE-eCCCCHHHHHH
Confidence 9999999999876 4556554 888873 34333 3444444332 223555 56899999999
Q ss_pred HHHhcCcceecccccCCCCc----ceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccc--cccC-CCceEeCCCCH
Q 045882 427 YYALAECCIVNAVRDGMNLM----PYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGC--SPSL-SGAIRVNPWDI 499 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--s~~l-~~a~~VnP~d~ 499 (832)
+|+.||++|+||..|+++++ .+|||+|+ .|+|+|..+|. .+.+ ..|++++|.|+
T Consensus 300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-------------------~PVi~s~~~g~~~~~~i~~~G~~~~~~d~ 360 (412)
T PRK10307 300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASG-------------------RNVVATAEPGTELGQLVEGIGVCVEPESV 360 (412)
T ss_pred HHHhcCEeEEeeccCcccccCcHHHHHHHHcC-------------------CCEEEEeCCCchHHHHHhCCcEEeCCCCH
Confidence 99999999999999996554 58999994 46899988774 3444 56999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHHHHHHHHH
Q 045882 500 DAVADALHDAITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 500 ~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~ 547 (832)
+++|++|.++++. ++++....++.++++. .++....+++|++.+++.
T Consensus 361 ~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 361 EALVAAIAALARQ-ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 9999999999875 4556666677787776 589999999998888764
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=197.38 Aligned_cols=356 Identities=12% Similarity=0.121 Sum_probs=201.1
Q ss_pred cccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEec
Q 045882 152 QYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLH 230 (832)
Q Consensus 152 ~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH 230 (832)
.-||-.|+--.+ .....+++..-=.|.. ..|-+..... .....|+++.||++.-.....||++.++++..|+.|
T Consensus 106 ~~lW~~~~i~s~---~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtH 180 (590)
T cd03793 106 GELWELCGIGSP---EGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTH 180 (590)
T ss_pred HHHHHHcCCCCC---CCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEec
Confidence 457888876533 2223344433333431 1122222222 111259999999999999999999889999999999
Q ss_pred CCCCChhhhhcCCch-HHHHHHHHhCCEEeecCh-------hhHHHHHHH-----HHHHhCCcccccCceeeEEEcCeEE
Q 045882 231 SPFPSSEIYRTLPVR-NEILKALLNADLIGFHTF-------DYARHFLSC-----CSRMLGLDYESKRGYIGLEYFGRTI 297 (832)
Q Consensus 231 ~PfP~~e~~r~lp~r-~~il~~ll~~dligf~t~-------~~~~~Fl~~-----~~r~l~~~~~~~~~~~~~~~~gr~~ 297 (832)
+.++-|.+-.. ..+-. ++-.|.-. -+.++.++. ++++..++...... .....+++.
T Consensus 181 ----AT~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~~Ll~~~p 249 (590)
T cd03793 181 ----ATLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AEHLLKRKP 249 (590)
T ss_pred ----ccccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HHHHhCCCC
Confidence 44555532110 00000 00000000 012222211 11111111100000 011223333
Q ss_pred EEEEeecCCCchHHHhhcCCC----ChHHHHH-----HHHHHc---CCCEEEEE-eccccc-cCCHHHHHHHHHHHHHhC
Q 045882 298 YVKILHVGIHMGRLESALNHP----SSSIKVK-----EIREQF---KGKKVIVG-VDDMDI-FKGISLKLLAMEQLLKVH 363 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~----~~~~~~~-----~l~~~~---~~~~vil~-VdRld~-~KGi~~~l~A~~~ll~~~ 363 (832)
.+ |+|+|||+..|.+..... ...+++. .++.+| .+++++++ +||+++ .||++.+|+|+.+|-..-
T Consensus 250 d~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l 328 (590)
T cd03793 250 DV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLL 328 (590)
T ss_pred CE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHH
Confidence 33 899999999986432100 1111222 234544 36788888 799999 999999999999875521
Q ss_pred CCc-cCcEEEEEEecCCCCCh---------hHHHHHHHHHHHHHHHHhcc---------c--------------------
Q 045882 364 PEL-QGKLVLVQIVNPARSTG---------KDVQDAKLETYTITKRINET---------Y-------------------- 404 (832)
Q Consensus 364 P~~-~~~vvLvqi~~p~r~~~---------~~~~~l~~ev~~lv~~iN~~---------~-------------------- 404 (832)
..- .++.|+..+..|+...+ .-..++++.+.++..+|+.+ .
T Consensus 329 ~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~ 408 (590)
T cd03793 329 KVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIF 408 (590)
T ss_pred HhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHH
Confidence 111 12233333444554321 22345666666666666555 1
Q ss_pred ---------------------------------C-CCCcccEEEecCCCC------HHHHHHHHHhcCcceecccccCCC
Q 045882 405 ---------------------------------G-VPGYEPVILIDRPVP------LHEKTAYYALAECCIVNAVRDGMN 444 (832)
Q Consensus 405 ---------------------------------~-~~~~~pv~~~~~~v~------~~el~aly~~ADv~vvtS~~EGmn 444 (832)
. ..+...|+|....++ ..+...+|+.||+||+||.+||||
T Consensus 409 ~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG 488 (590)
T cd03793 409 ALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWG 488 (590)
T ss_pred hhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCC
Confidence 0 012223444433222 335788999999999999999999
Q ss_pred CcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccc----ccCC----CceEeC-------CCCHHHHHHHHHHH
Q 045882 445 LMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCS----PSLS----GAIRVN-------PWDIDAVADALHDA 509 (832)
Q Consensus 445 Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s----~~l~----~a~~Vn-------P~d~~~~A~ai~~a 509 (832)
++++||||| +.|+|+|..+|.. +.+. .|+.|. +.+++++|++|.+.
T Consensus 489 ~~~lEAma~-------------------G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~ 549 (590)
T cd03793 489 YTPAECTVM-------------------GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEF 549 (590)
T ss_pred cHHHHHHHc-------------------CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHH
Confidence 999999999 4579999999984 4432 378887 56678999999998
Q ss_pred hcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHH
Q 045882 510 ITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQD 543 (832)
Q Consensus 510 L~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 543 (832)
++++..++........+.....++.+-+..+++.
T Consensus 550 ~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A 583 (590)
T cd03793 550 CQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKA 583 (590)
T ss_pred hCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 8776544443333333555566766666655554
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=195.87 Aligned_cols=185 Identities=12% Similarity=0.013 Sum_probs=125.9
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccc--cccCCHHHHHHHHHHHHHhCCCccCcEEEEEE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDM--DIFKGISLKLLAMEQLLKVHPELQGKLVLVQI 375 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRl--d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (832)
++.++|+|||++.+..... . ...+ ...++++|++|+|. ++.||+..+++|+.++ .+ ++.|+++
T Consensus 213 ~i~vI~NGid~~~~~~~~~---~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~iv 277 (405)
T PRK10125 213 RCRIINNGIDMATEAILAE---L----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTF 277 (405)
T ss_pred CEEEeCCCcCccccccccc---c----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEE
Confidence 6778999999754321100 0 0001 12467889999994 4789999999999875 23 3558888
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeec
Q 045882 376 VNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 376 ~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
|... ... . ..|.+++...+..++..+|+.||+||+||..||||++++|||||+
T Consensus 278 G~g~-----~~~-----------------~----~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G- 330 (405)
T PRK10125 278 GKFS-----PFT-----------------A----GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG- 330 (405)
T ss_pred cCCC-----ccc-----------------c----cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC-
Confidence 8432 100 0 124444433467899999999999999999999999999999994
Q ss_pred CCCCchhhhhhhcCCCCCceEEeccCccccccCC--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-hhcCC
Q 045882 456 GTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS--GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRY-ICSHD 532 (832)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~ 532 (832)
.|||+|+.+|+.+.+. +|++|+|.|++++|+++...+.. .+.....++.++. ...++
T Consensus 331 ------------------~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~--~~~~~~~~~~r~~~~~~fs 390 (405)
T PRK10125 331 ------------------VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQ--AVFGTTLAEFSQRSRAAYS 390 (405)
T ss_pred ------------------CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHH--HhhhhHHHHHHHHHHHhCC
Confidence 5799999999888773 59999999999999865432210 0000011233444 45588
Q ss_pred HHHHHHHHHHHH
Q 045882 533 VAYWAHSFMQDL 544 (832)
Q Consensus 533 ~~~W~~~~l~~l 544 (832)
....++++++-.
T Consensus 391 ~~~~~~~y~~lY 402 (405)
T PRK10125 391 GQQMLEEYVNFY 402 (405)
T ss_pred HHHHHHHHHHHH
Confidence 888888776644
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.80 E-value=9e-18 Score=183.55 Aligned_cols=286 Identities=18% Similarity=0.135 Sum_probs=200.3
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhh----cCCchHHHHHHHHhCCEEeecChhhH
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR----TLPVRNEILKALLNADLIGFHTFDYA 266 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r----~lp~r~~il~~ll~~dligf~t~~~~ 266 (832)
+.+..++ |+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+.+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3444455 999999999888776 4455678999999998887543211 00111222334566788888887666
Q ss_pred HHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecccccc
Q 045882 267 RHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIF 346 (832)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~ 346 (832)
+.+.+.. .....++.++|+|+|...+.... ...........+++.++++||+++.
T Consensus 157 ~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELRELG-------------------GVPPEKITVIPNGVDTERFRPAP------RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhcC-------------------CCCCCcEEEecCcccccccCccc------hHHHhhcCCcCCCeEEEEecchhhh
Confidence 6554310 01113677899999988764211 1111111112467899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
||+..+++|+..+.+++|+++ |+.+|. ++....+++. +.+.+ ..+-+.+.+.++.+|+..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~~~~----~~~~~-------~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREELEAL----AAELG-------LGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHHHHHH----HHHhC-------CCcceEEEeccChhhHHH
Confidence 999999999999988887655 888872 2333333333 32222 122344566899999999
Q ss_pred HHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHH
Q 045882 427 YYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVA 503 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A 503 (832)
+|+.||++++|+..||++++++|||+|+ .|+|++..+|..+.+. .|+++++.|+++++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~g-------------------~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 332 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAAG-------------------LPVVASDVGGIPEVVEDGETGLLVPPGDPEALA 332 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHcC-------------------CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHH
Confidence 9999999999999999999999999994 4799999999888884 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHH-hhhhcCCHHHHHHHHHHHH
Q 045882 504 DALHDAITMSDVEKQLRHEKHY-RYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~-~~v~~~~~~~W~~~~l~~l 544 (832)
++|.++++.++. ++...++.+ .....++...+++.+++-+
T Consensus 333 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 333 EAILRLLDDPEL-RRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHcChHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 999999986543 334444444 5567788888888777643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-18 Score=187.21 Aligned_cols=283 Identities=17% Similarity=0.169 Sum_probs=191.1
Q ss_pred HHHhCCCCCEEEEeCcccc----cHHHHHH-hhcCCCeEEEEecCCCCChhhhhcCCchHHH-HHHHHhCCEEeecChhh
Q 045882 192 MEVINPEEDYVWIHDYHLM----VLPTFLR-RRFHRVKLGFFLHSPFPSSEIYRTLPVRNEI-LKALLNADLIGFHTFDY 265 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~----llp~~lr-~~~~~~~ig~flH~PfP~~e~~r~lp~r~~i-l~~ll~~dligf~t~~~ 265 (832)
+...+| |+|++|..+-. ......+ .+..+.++.+.+|.+.|....+ ....+ -.-+-.+|.|-+.+.+.
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~----~~~~~~~~~~~~~d~ii~~s~~~ 145 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRP----GDRALLRLLLRRADAVIVMSSEL 145 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccch----hhhHHHHHHHhcCCEEEEeeHHH
Confidence 344455 89999873321 1111111 1236789999999862221111 11122 22345689998886455
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccc
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDI 345 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~ 345 (832)
++.++... . ..++.++|+|++...+.... . .+. .....++.+|+++||+.+
T Consensus 146 ~~~~~~~~--------------------~-~~~~~~i~~~~~~~~~~~~~------~-~~~-~~~~~~~~~i~~~G~~~~ 196 (366)
T cd03822 146 LRALLLRA--------------------Y-PEKIAVIPHGVPDPPAEPPE------S-LKA-LGGLDGRPVLLTFGLLRP 196 (366)
T ss_pred HHHHHhhc--------------------C-CCcEEEeCCCCcCcccCCch------h-hHh-hcCCCCCeEEEEEeeccC
Confidence 55554210 0 23667799999987654211 1 111 112256789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 045882 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
.||+..+++|++.+.+++|+++ |+.+|... +.......+..+++.+.+. . ..|.++++.++.+++.
T Consensus 197 ~K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~~~----~--~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 197 YKGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERLGL----A--DRVIFINRYLPDEELP 262 (366)
T ss_pred CCCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhcCC----C--CcEEEecCcCCHHHHH
Confidence 9999999999999999888766 88887432 1111111111122333221 1 1366666569999999
Q ss_pred HHHHhcCcceeccccc--CCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---CCceEeCCCCHH
Q 045882 426 AYYALAECCIVNAVRD--GMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL---SGAIRVNPWDID 500 (832)
Q Consensus 426 aly~~ADv~vvtS~~E--GmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l---~~a~~VnP~d~~ 500 (832)
.+|+.||++++||..| |++++++|||+|+ .|+|+|..+| .+.+ ..|++++|.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G-------------------~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGFG-------------------KPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHcC-------------------CCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 9999999999994 4699999888 6666 358999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 501 AVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
+++++|.++++.+ +.+....++.++++.++++..+++.+.+.+
T Consensus 323 ~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9999999999854 445556677788888899999999887644
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-18 Score=181.44 Aligned_cols=187 Identities=12% Similarity=0.087 Sum_probs=130.9
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE 657 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~ 657 (832)
.|+||+|+||||++ .+...++.+.++|++| +++|+.|+++|||+...+..+++.+. ..++|++||+.|+.+..-.
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~ 76 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYF 76 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccccc
Confidence 48999999999999 5667788899999999 68899999999999999999998876 3589999999999774311
Q ss_pred ---------------EEEcCcccchhHHHHHHHHHHHHHhcCCceEEe------------------------ecceeEEE
Q 045882 658 ---------------WETSTVAADFEWKRITEPVMKLYTEATDGSYIE------------------------KKETALVW 698 (832)
Q Consensus 658 ---------------w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie------------------------~k~~~l~~ 698 (832)
|...+-. . ...++.+++...+.....+.- .++++-.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~lg~---~-y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~ 152 (302)
T PRK12702 77 PAGILDEQWQHRPPYYVCALGL---P-YPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIF 152 (302)
T ss_pred cccccccccccCCCceEEecCC---C-HHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcce
Confidence 1111101 1 233444444443322211111 12233333
Q ss_pred EeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEe------------------C---CCCHHHHHHHHHHhh
Q 045882 699 HYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKP------------------Q---GVTKGLVAEKVLSTM 757 (832)
Q Consensus 699 ~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p------------------~---gvnKG~al~~Ll~~l 757 (832)
.+... ...+ .+.+...++.+..|..++.+.. . +.+||.|++.|.+.+
T Consensus 153 ~w~~~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y 220 (302)
T PRK12702 153 SYSGD--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCY 220 (302)
T ss_pred EecCC--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHH
Confidence 33211 1122 4455567788889998888886 5 899999999999988
Q ss_pred hhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 758 ISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 758 ~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
.... ..-.++++|||.||++||++++..
T Consensus 221 ~~~~-~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 221 QRHL-GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred Hhcc-CCceEEEecCChhhHHHHHhCCee
Confidence 4433 334899999999999999999864
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=8e-18 Score=185.48 Aligned_cols=274 Identities=16% Similarity=0.182 Sum_probs=180.9
Q ss_pred CCEEEEeCcc-cccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHH------HHHHHhCCEEeecChhhHHHHHH
Q 045882 199 EDYVWIHDYH-LMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEI------LKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 199 ~d~vwvhDyh-l~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~i------l~~ll~~dligf~t~~~~~~Fl~ 271 (832)
.|+|++|+.. ....+.....+..+.++.+..|..++....... +.+..+ -..+-.+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 3999999843 322322222233468888999976654321000 111111 11233456666655333322211
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCC
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKG 348 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KG 348 (832)
.+...++.++|+|+|.+.+.... ... . ++.+ .++++++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~---~~~--~---~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALP---SRG--R---RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcch---hhh--h---hhhccCCCCCcEEEEEeCcchhcC
Confidence 11233577899999998775321 111 1 2323 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 045882 349 ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYY 428 (832)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly 428 (832)
+..+++|+.++.+++|+++ |+.+|... . .+ ...+..++.+. + ..+.+.+.+.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~---~-~~---~~~~~~~~~~~----~---~~~~v~~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE---G-GY---RAELKQIAAAL----G---LEDRVTFTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC---c-ch---HHHHHHHHHhc----C---ccceEEEcCCCChHHHHHHH
Confidence 9999999999999888776 88887432 1 11 12222222322 2 22344557799999999999
Q ss_pred HhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC--CceEeCCCCHHHHHHHH
Q 045882 429 ALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS--GAIRVNPWDIDAVADAL 506 (832)
Q Consensus 429 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--~a~~VnP~d~~~~A~ai 506 (832)
+.||++|+||..||||++++|||+|+ .|+|+|+.+|..+.+. .++++ |.+.++++++|
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i 339 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACG-------------------TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAAL 339 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcC-------------------CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHH
Confidence 99999999999999999999999994 4799999999888873 35555 55669999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhh-hhcCCHHHHHHHHH
Q 045882 507 HDAITMSDVEKQLRHEKHYRY-ICSHDVAYWAHSFM 541 (832)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l 541 (832)
.++++++ +++....++.+++ ...++....++.++
T Consensus 340 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 340 RRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999976 5556666666776 56677776666554
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=188.81 Aligned_cols=194 Identities=17% Similarity=0.187 Sum_probs=142.5
Q ss_pred eecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCC
Q 045882 302 LHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARS 381 (832)
Q Consensus 302 ~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 381 (832)
+|.|||++.|.+... ...+.++++...+.+..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 567999998864210 11112222222235678999999999999999999999999999999876777776651
Q ss_pred ChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEec--CCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCC
Q 045882 382 TGKDVQDAKLETYTITKRINETYGVPGYEPVILID--RPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPK 459 (832)
Q Consensus 382 ~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~ 459 (832)
. ++. +. +..+ .|.+++ +.++.+++.++|+.||+||+||..||||++++|||||+
T Consensus 192 --~-------~~~----~l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----- 247 (335)
T PHA01633 192 --K-------QFT----QL----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----- 247 (335)
T ss_pred --H-------HHH----Hc----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC-----
Confidence 1 111 11 1111 266654 67789999999999999999999999999999999994
Q ss_pred chhhhhhhcCCCCCceEEeccCccccccCCC---------------------ceEeCCCCHHHHHHHHHHHhcCCHHHHH
Q 045882 460 MDEAMELASVCPRTSMLVISEFIGCSPSLSG---------------------AIRVNPWDIDAVADALHDAITMSDVEKQ 518 (832)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~---------------------a~~VnP~d~~~~A~ai~~aL~m~~~e~~ 518 (832)
.|+|+|..+|..+..++ |+.++++|++++|++|.+++.+.+.+
T Consensus 248 --------------~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~-- 311 (335)
T PHA01633 248 --------------TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE-- 311 (335)
T ss_pred --------------CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--
Confidence 46999988877665321 45788899999999999998876433
Q ss_pred HHHHHHHhhhhcCCHHHHHHHHH
Q 045882 519 LRHEKHYRYICSHDVAYWAHSFM 541 (832)
Q Consensus 519 ~r~~~~~~~v~~~~~~~W~~~~l 541 (832)
+|..+.++..+++++..-+++|+
T Consensus 312 ~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 312 ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhhHHHHHHHHhcCHHHHHHHhh
Confidence 33445567788888877777664
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=181.95 Aligned_cols=282 Identities=16% Similarity=0.158 Sum_probs=189.2
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHH-HHhCCEEeecChhhHHHHH
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKA-LLNADLIGFHTFDYARHFL 270 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~-ll~~dligf~t~~~~~~Fl 270 (832)
++..+| |+|++|++|......++.......++.+..|.-++...-+ ..+....+..- .-.+|.+...+......+.
T Consensus 76 ~~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 152 (365)
T cd03807 76 IRRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQ 152 (365)
T ss_pred HHhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHH
Confidence 344466 8999999998877777766656788999999765542100 00111111111 1235665444443333332
Q ss_pred HHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccC
Q 045882 271 SCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFK 347 (832)
Q Consensus 271 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~K 347 (832)
.. +. ...++.++|+|+|...+..... ....+++++ .++.+++++||+++.|
T Consensus 153 ~~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K 206 (365)
T cd03807 153 AI-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQK 206 (365)
T ss_pred Hc-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhc
Confidence 10 11 1225667899999887753221 112233344 4678999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 045882 348 GISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAY 427 (832)
Q Consensus 348 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~al 427 (832)
|+..+++|+..+.+++|+++ |+.+|.+. +....+.... .+ .+... .|.++ +. .+++..+
T Consensus 207 ~~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~----~~~~~--~v~~~-g~--~~~~~~~ 265 (365)
T cd03807 207 DHATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE----LGLED--KVILL-GE--RSDVPAL 265 (365)
T ss_pred CHHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh----cCCCc--eEEEc-cc--cccHHHH
Confidence 99999999999998888765 88887432 2222222211 11 12111 24443 33 5689999
Q ss_pred HHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC-CceEeCCCCHHHHHHHH
Q 045882 428 YALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-GAIRVNPWDIDAVADAL 506 (832)
Q Consensus 428 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-~a~~VnP~d~~~~A~ai 506 (832)
|+.||++++||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~g-------------------~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i 326 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMACG-------------------LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAI 326 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhcC-------------------CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHH
Confidence 999999999999999999999999994 4699999999888885 58999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHHHHH
Q 045882 507 HDAITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSFMQD 543 (832)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~ 543 (832)
.++++.+ +++....++.++++. .++....++.+.+-
T Consensus 327 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 327 EALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999976 455555666677765 47877777777653
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-17 Score=183.71 Aligned_cols=274 Identities=16% Similarity=0.191 Sum_probs=193.3
Q ss_pred CEEEEeC-cccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcC-Cc-------hHHH-HHHHHhCCEEeecChhhHHHH
Q 045882 200 DYVWIHD-YHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTL-PV-------RNEI-LKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 200 d~vwvhD-yhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~l-p~-------r~~i-l~~ll~~dligf~t~~~~~~F 269 (832)
|+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+ -..+..+|.+-+.+...++.+
T Consensus 101 D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~ 180 (394)
T cd03794 101 DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYL 180 (394)
T ss_pred CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 8999998 445556665555556889999999888754322111 11 1111 123566899999998777766
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
.. .+ ....++.++|+|++...+..... ...... .....++.+++++||+.+.||+
T Consensus 181 ~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 181 VR-----RG---------------VPPEKISVIPNGVDLELFKPPPA----DESLRK-ELGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred Hh-----cC---------------CCcCceEEcCCCCCHHHcCCccc----hhhhhh-ccCCCCcEEEEEecCcccccCH
Confidence 41 11 11235678999999887753221 111111 1122578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|+.++.+. |+++ |+.+|. +++...+++.+ ... +...|.+++ .++.+++.++|+
T Consensus 236 ~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~~~----~~~-------~~~~v~~~g-~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKELA----KAL-------GLDNVTFLG-RVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHHHH----HHc-------CCCcEEEeC-CCChHHHHHHHH
Confidence 9999999999776 6554 887773 33333333321 111 223466655 899999999999
Q ss_pred hcCcceecccccCC-----CCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHH
Q 045882 430 LAECCIVNAVRDGM-----NLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDA 501 (832)
Q Consensus 430 ~ADv~vvtS~~EGm-----nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~ 501 (832)
.||++++||..|++ +++.+|||+|+ .|+|+|..+|..+.+. .|+++++.|+++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G-------------------~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~ 354 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG-------------------KPVLASVDGESAELVEEAGAGLVVPPGDPEA 354 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC-------------------CcEEEecCCCchhhhccCCcceEeCCCCHHH
Confidence 99999999999876 55579999994 5799999999998883 489999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHH
Q 045882 502 VADALHDAITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSF 540 (832)
Q Consensus 502 ~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~ 540 (832)
++++|.++++ .++++....++.++++. .++...+++.+
T Consensus 355 l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 355 LAAAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 9999999995 45566666677777776 78888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=183.64 Aligned_cols=276 Identities=16% Similarity=0.106 Sum_probs=190.3
Q ss_pred HHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCch----HHHHH-HHHhCCEEeecChhhHH
Q 045882 193 EVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVR----NEILK-ALLNADLIGFHTFDYAR 267 (832)
Q Consensus 193 ~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r----~~il~-~ll~~dligf~t~~~~~ 267 (832)
+..+| |+|++|..-...+......+..++++.+++|..||..-........ ..+.+ ..-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55567 8999996654333333323344688999999887743211111111 11222 23467888887776655
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccC
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFK 347 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~K 347 (832)
.+.. .+ ...+.++|+|+|...|.+... .......+. ..++++++++||+.+.|
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~--~~~~~~i~~~G~~~~~k 210 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRR---DEALRARLG--PPDRPVLLYVGRLAPEK 210 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCcccc---cHHHHHHhC--CCCCeEEEEEecccccc
Confidence 2211 00 124667899999987753221 111111111 24678999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 045882 348 GISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAY 427 (832)
Q Consensus 348 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~al 427 (832)
|+..+++|+.++.++ |+++ |+.+|. +++...++ + ....|.+ .+.++.+++..+
T Consensus 211 ~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------------~--~~~~v~~-~g~~~~~~~~~~ 263 (364)
T cd03814 211 NLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------------A--RYPNVHF-LGFLDGEELAAA 263 (364)
T ss_pred CHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------------c--cCCcEEE-EeccCHHHHHHH
Confidence 999999999999877 7665 888873 22322222 0 0123544 456899999999
Q ss_pred HHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHH
Q 045882 428 YALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (832)
Q Consensus 428 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ 504 (832)
|+.||++++||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|.+++++
T Consensus 264 ~~~~d~~l~~s~~e~~~~~~lEa~a~g-------------------~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~ 324 (364)
T cd03814 264 YASADVFVFPSRTETFGLVVLEAMASG-------------------LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAA 324 (364)
T ss_pred HHhCCEEEECcccccCCcHHHHHHHcC-------------------CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHH
Confidence 999999999999999999999999994 4799999999888884 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 505 ALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
+|.++++. ++++....+..++++..+++..+++.+++.+
T Consensus 325 ~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 325 ALAALLAD-PELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHcC-HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999975 4555566667777788889888888877643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=183.64 Aligned_cols=270 Identities=17% Similarity=0.192 Sum_probs=184.9
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCC---chH-----HHHHHHHhCCEEeecC
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLP---VRN-----EILKALLNADLIGFHT 262 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp---~r~-----~il~~ll~~dligf~t 262 (832)
+.+..+| |+|++|+............+..++++.+.+|.+|+...-+...+ ... -....+-.+|.+...+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3455566 89999987655444443334457889999998876321111111 111 1112345688888777
Q ss_pred hhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEE
Q 045882 263 FDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVG 339 (832)
Q Consensus 263 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~ 339 (832)
......+.. .+ ....+.++|+|+|...+.... ... .++.+ .+++.|++
T Consensus 157 ~~~~~~~~~-----~~----------------~~~~~~vi~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE-----YG----------------VKRPIEVIPTGIDLDRFEPVD----GDD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh-----cC----------------CCCceEEcCCccchhccCccc----hhH----HHHhcCCCCCCeEEEE
Confidence 754444321 01 112477899999988775321 111 12222 46788999
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC
Q 045882 340 VDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419 (832)
Q Consensus 340 VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v 419 (832)
+||+.+.||+..+++|+..+.++.|+++ |+.+|.+ +.. .++.+++.+.+. .+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGDG-----PER----EELEELARELGL-------ADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeCC-----chH----HHHHHHHHHcCC-------CCcEEEeccC
Confidence 9999999999999999999988877655 8888732 222 233344433321 2234556789
Q ss_pred CHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCC
Q 045882 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNP 496 (832)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP 496 (832)
+.+++..+|+.||+++.||..||+|++.+|||+|+ .|+|+|..+|..+.+. +|+++++
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g-------------------~PvI~~~~~~~~~~i~~~~~g~~~~~ 328 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAAG-------------------LPVVAVDAPGLPDLVADGENGFLFPP 328 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHcC-------------------CcEEEeCCCChhhheecCceeEEeCC
Confidence 99999999999999999999999999999999994 4699999988888773 4899999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCC
Q 045882 497 WDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHD 532 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (832)
.|. +++++|.+++++++.. +...++.++++..+.
T Consensus 329 ~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 329 GDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 888 9999999999876543 555666677776655
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.8e-18 Score=187.89 Aligned_cols=280 Identities=15% Similarity=0.081 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCC---hhhhhcC-CchHHHHHHHHhC
Q 045882 180 YVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPS---SEIYRTL-PVRNEILKALLNA 255 (832)
Q Consensus 180 Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~---~e~~r~l-p~r~~il~~ll~~ 255 (832)
..+.-+.|-+++.. .. ..|++.+|-.+.... .+.......+...++|...-. ......+ ...+.++..+-.+
T Consensus 83 ~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (372)
T cd04949 83 EEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKV 158 (372)
T ss_pred HHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhC
Confidence 33444445555543 22 349999987776665 233333456677778854211 1000000 1123455556678
Q ss_pred CEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCE
Q 045882 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKK 335 (832)
Q Consensus 256 dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 335 (832)
|.|.+.+..-.+.+... ++. ...+.++|+|++...+.... .....+.
T Consensus 159 d~ii~~s~~~~~~l~~~----~~~----------------~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~ 205 (372)
T cd04949 159 DGVIVATEQQKQDLQKQ----FGN----------------YNPIYTIPVGSIDPLKLPAQ-------------FKQRKPH 205 (372)
T ss_pred CEEEEccHHHHHHHHHH----hCC----------------CCceEEEcccccChhhcccc-------------hhhcCCC
Confidence 98888887666655432 110 11267899999987765210 0113566
Q ss_pred EEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEe
Q 045882 336 VIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILI 415 (832)
Q Consensus 336 vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~ 415 (832)
.++++||+.+.||+..+++|+.++.+++|+++ |+.+|.+ ++...++. ++.+. +. ...+.+
T Consensus 206 ~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~----~~~~~----~~---~~~v~~ 265 (372)
T cd04949 206 KIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKE----LIEEL----GL---EDYVFL 265 (372)
T ss_pred eEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHH----HHHHc----CC---cceEEE
Confidence 89999999999999999999999999999877 8888843 22223333 32222 21 223344
Q ss_pred cCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCc-cccccCC---Cc
Q 045882 416 DRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFI-GCSPSLS---GA 491 (832)
Q Consensus 416 ~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~s~~l~---~a 491 (832)
.+ ..+++.++|+.||++|+||..||||++.+|||+|+ .|+|+|+.. |..+.+. +|
T Consensus 266 ~g--~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G-------------------~PvI~~~~~~g~~~~v~~~~~G 324 (372)
T cd04949 266 KG--YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHG-------------------LPVISYDVNYGPSEIIEDGENG 324 (372)
T ss_pred cC--CCCCHHHHHhhhhEEEecccccccChHHHHHHhCC-------------------CCEEEecCCCCcHHHcccCCCc
Confidence 44 35689999999999999999999999999999994 468999877 6777662 48
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 492 IRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 492 ~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
++++|.|++++|++|..+++.+ +.+....++.++...+++...+++
T Consensus 325 ~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 325 YLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred eEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 9999999999999999999865 445555566666666666655554
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.1e-17 Score=186.68 Aligned_cols=271 Identities=12% Similarity=0.093 Sum_probs=187.7
Q ss_pred CCCCCEEEEeCcccccHH-HHHHhhcCCCeEEEEecCCCCChhhhhcC-C-chHHHHH-HHHhCCEEeecChhhHHHHHH
Q 045882 196 NPEEDYVWIHDYHLMVLP-TFLRRRFHRVKLGFFLHSPFPSSEIYRTL-P-VRNEILK-ALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 196 ~~~~d~vwvhDyhl~llp-~~lr~~~~~~~ig~flH~PfP~~e~~r~l-p-~r~~il~-~ll~~dligf~t~~~~~~Fl~ 271 (832)
+++.|+++.|-+|..... .+++++....++....|-. +++... + ....+.+ .+-.+|.|.+.+....+.+..
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~----d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~ 200 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGY----DLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK 200 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccc----hhhhhhccccchHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 344577777765544433 4566776666788888942 222111 1 1111222 245789998888766654432
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHH
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISL 351 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~ 351 (832)
. .+ ....++.++|+|++...+... + ...++..|+++||+.+.||+..
T Consensus 201 ~----~~---------------~~~~ki~vi~~gv~~~~~~~~---~-----------~~~~~~~il~~Grl~~~Kg~~~ 247 (407)
T cd04946 201 R----YP---------------AYKEKIKVSYLGVSDPGIISK---P-----------SKDDTLRIVSCSYLVPVKRVDL 247 (407)
T ss_pred H----CC---------------CccccEEEEECCcccccccCC---C-----------CCCCCEEEEEeeccccccCHHH
Confidence 1 11 112356788999998765321 0 1145678999999999999999
Q ss_pred HHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh-
Q 045882 352 KLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL- 430 (832)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~- 430 (832)
+++|+.++.+++|+.. +.++.+|. |++.+++ ++++++. +. .+.+.+.|.++.+++.++|+.
T Consensus 248 li~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l----~~~~~~~----~~---~~~V~f~G~v~~~e~~~~~~~~ 309 (407)
T cd04946 248 IIKALAALAKARPSIK--IKWTHIGG-----GPLEDTL----KELAESK----PE---NISVNFTGELSNSEVYKLYKEN 309 (407)
T ss_pred HHHHHHHHHHhCCCce--EEEEEEeC-----chHHHHH----HHHHHhc----CC---CceEEEecCCChHHHHHHHhhc
Confidence 9999999999988763 56676763 3443333 3333321 11 123445779999999999986
Q ss_pred -cCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCC---ceEeCC-CCHHHHHHH
Q 045882 431 -AECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSG---AIRVNP-WDIDAVADA 505 (832)
Q Consensus 431 -ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~---a~~VnP-~d~~~~A~a 505 (832)
||+++.||..|||+++++|||+|+ .|+|+|..+|..+.+.+ |++++| .|++++|++
T Consensus 310 ~~~v~v~~S~~Eg~p~~llEAma~G-------------------~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~ 370 (407)
T cd04946 310 PVDVFVNLSESEGLPVSIMEAMSFG-------------------IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSS 370 (407)
T ss_pred CCCEEEeCCccccccHHHHHHHHcC-------------------CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHH
Confidence 688999999999999999999994 47999999999988843 688876 489999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHH
Q 045882 506 LHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFM 541 (832)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 541 (832)
|.++++ +++++....++.++++ ..++...+.++|+
T Consensus 371 I~~ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 371 LSKFID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 999998 4566666667777776 4578888877765
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=182.48 Aligned_cols=282 Identities=21% Similarity=0.221 Sum_probs=194.7
Q ss_pred HhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHH
Q 045882 194 VINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCC 273 (832)
Q Consensus 194 ~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~ 273 (832)
..++ |+|++|......+......+..+.++.+..|.+++....... ..+......+-.+|.+.+.+......+.+..
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4444 899999655444444443444457899999977654322111 1233333456678999998877766664311
Q ss_pred HHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHH
Q 045882 274 SRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKL 353 (832)
Q Consensus 274 ~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l 353 (832)
....++.++|+|+|...+.... ......+ ....+++.++++||+++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPAD-----RAEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcc-----hHHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 1123567899999988775321 1111111 1124678999999999999999999
Q ss_pred HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCc
Q 045882 354 LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAEC 433 (832)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv 433 (832)
+|++.+.+++|+++ |+.+|.+ ++...+++ ++++. +..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~~----l~i~g~~-----~~~~~~~~----~~~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDVH----LVIVGDG-----PLREALEA----LAAEL-------GLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCeE----EEEEcCC-----cchHHHHH----HHHhc-------CCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 99999988877655 8777632 33333333 33222 22344556778999999999999999
Q ss_pred ceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHh
Q 045882 434 CIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAI 510 (832)
Q Consensus 434 ~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL 510 (832)
++.||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|+++++++|.+++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~G-------------------~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMACG-------------------LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred eecchhhccCChHHHHHHhcC-------------------CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh
Confidence 999999999999999999994 4799999998888773 358999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 511 TMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
+.+.. +...+........++...+++.+.+.++
T Consensus 343 ~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 343 ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 87655 2223333444556777777777776554
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-18 Score=182.61 Aligned_cols=193 Identities=20% Similarity=0.286 Sum_probs=122.5
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEEEeCCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i~~~~~ 655 (832)
+++|++|+||||++ .+..-..+..+.++ ....+++.++++|||+...+.+.+...+ ...+|+++|+.|+....
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~ 77 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGEN 77 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESST
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCC
Confidence 68999999999993 12222234444444 2247899999999999999999887642 46799999999998431
Q ss_pred ----ccEEEcCcccchhHH-HHHHHHHHHHHhcCCceEE----eecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC
Q 045882 656 ----SEWETSTVAADFEWK-RITEPVMKLYTEATDGSYI----EKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE 726 (832)
Q Consensus 656 ----~~w~~~~~~~~~~w~-~~v~~i~~~~~e~~~gs~i----e~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~ 726 (832)
..|...+ +..|. +.+++++.. .++... +...+.+.+.+...+ .....+.|+..+...
T Consensus 78 ~~~d~~w~~~i---~~~w~~~~v~~~l~~----~~~l~~q~~~~q~~~k~sy~~~~~~-------~~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 78 WQPDEEWQAHI---DERWDRERVEEILAE----LPGLRPQPESEQRPFKISYYVDPDD-------SADILEEIRARLRQR 143 (247)
T ss_dssp TEE-HHHHHHH---HTT--HHHHHHHHHC----HCCEEEGGCCCGCCTCECEEEETTS-------HCHHHHHHHHHHHCC
T ss_pred CcChHHHHHHH---HhcCChHHHHHHHHH----hhCcccCCccccCCeeEEEEEeccc-------chhHHHHHHHHHHHc
Confidence 1232221 11333 233334333 333222 222334455544321 123445566555544
Q ss_pred C--EE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEe
Q 045882 727 P--VV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTV 803 (832)
Q Consensus 727 ~--~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v 803 (832)
+ +. +.++...++|.|+++|||.|+++|++++ ++++++|+++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 4 33 3467889999999999999999999999 999999999999999999995544 47888
Q ss_pred CCc
Q 045882 804 GQK 806 (832)
Q Consensus 804 G~~ 806 (832)
|++
T Consensus 207 ~Na 209 (247)
T PF05116_consen 207 GNA 209 (247)
T ss_dssp TTS
T ss_pred cCC
Confidence 875
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.2e-18 Score=195.33 Aligned_cols=314 Identities=11% Similarity=0.095 Sum_probs=181.9
Q ss_pred EecCHHHHHHHhhhccccccc--cccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccH
Q 045882 135 TFLSSDLQKKFYHGFCKQYLW--PLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVL 212 (832)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~lw--p~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~ll 212 (832)
+|=++++++.|......+-.= |.|-. .++| ++|....-.-+- +-... +.+...+| |+|++|..-.+..
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i--~fYp---g~~~~~~~SI~p-~gdI~--~~L~~f~P--DVVHLatP~~LGw 448 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKI--SFYP---GKFSKERRSIIP-AGDTS--QFIPSKDA--DIAILEEPEHLNW 448 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceE--Eeec---chhccCCccccc-hHHHH--HHhhccCC--CEEEECCchhhcc
Confidence 677788888887766533111 11211 1223 344332221111 11111 11233445 8999997644433
Q ss_pred H---HHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHH--HHHHhCCcccccCce
Q 045882 213 P---TFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSC--CSRMLGLDYESKRGY 287 (832)
Q Consensus 213 p---~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~--~~r~l~~~~~~~~~~ 287 (832)
. ....+++. ++...+|+.||.+--+..+..-+.++. .++++|+.. |++++.++.....
T Consensus 449 ~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~hcD~VIaPS~atq~-- 511 (794)
T PLN02501 449 YHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAYCHKVLRLSAATQD-- 511 (794)
T ss_pred HHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhhCCEEEcCCHHHHH--
Confidence 3 33444443 688899999985322222222122111 122333332 5556554422211
Q ss_pred eeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcC---CCEEEEEeccccccCCHHHHHHHHHHHHHhCC
Q 045882 288 IGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFK---GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHP 364 (832)
Q Consensus 288 ~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P 364 (832)
+ . +. .|.. .+|||++.|.+... . . .. .++. ..+.+++||||.+.||+..+|+|+..+.++.|
T Consensus 512 --L--~-~~-vI~n-VnGVDte~F~P~~r---~-~---~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~p 576 (794)
T PLN02501 512 --L--P-KS-VICN-VHGVNPKFLKIGEK---V-A---EE-RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELD 576 (794)
T ss_pred --h--c-cc-ceee-cccccccccCCcch---h-H---HH-HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCC
Confidence 1 1 11 1111 15999998875321 1 1 11 1221 22458999999999999999999999988888
Q ss_pred CccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCC
Q 045882 365 ELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMN 444 (832)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmn 444 (832)
+++ |+++| +|++.+++++ ++.+.+. .|.|+++ .++..++|+.+||||+||.+||||
T Consensus 577 nvr----LvIVG-----DGP~reeLe~----la~eLgL--------~V~FLG~---~dd~~~lyasaDVFVlPS~sEgFG 632 (794)
T PLN02501 577 GFN----LDVFG-----NGEDAHEVQR----AAKRLDL--------NLNFLKG---RDHADDSLHGYKVFINPSISDVLC 632 (794)
T ss_pred CeE----EEEEc-----CCccHHHHHH----HHHHcCC--------EEEecCC---CCCHHHHHHhCCEEEECCCcccch
Confidence 765 88887 4555444444 4443321 2555543 344558999999999999999999
Q ss_pred CcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 045882 445 LMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--GAIRVNPWDIDAVADALHDAITMSDVEKQLRH 521 (832)
Q Consensus 445 Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~ 521 (832)
+|++|||||+ .|||+++..|... + . ++++ +.|.++++++|.++|+.++. + ...
T Consensus 633 lVlLEAMA~G-------------------lPVVATd~pG~e~-V~~g~nGll--~~D~EafAeAI~~LLsd~~~-r-l~~ 688 (794)
T PLN02501 633 TATAEALAMG-------------------KFVVCADHPSNEF-FRSFPNCLT--YKTSEDFVAKVKEALANEPQ-P-LTP 688 (794)
T ss_pred HHHHHHHHcC-------------------CCEEEecCCCCce-EeecCCeEe--cCCHHHHHHHHHHHHhCchh-h-hHH
Confidence 9999999994 4699999887543 4 2 3443 47999999999999987652 2 222
Q ss_pred HHHHhhhhcCCHHHHHHHHHH
Q 045882 522 EKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 522 ~~~~~~v~~~~~~~W~~~~l~ 542 (832)
+. ...+++..-++++++
T Consensus 689 ~a----~~~~SWeAaadrLle 705 (794)
T PLN02501 689 EQ----RYNLSWEAATQRFME 705 (794)
T ss_pred HH----HhhCCHHHHHHHHHH
Confidence 21 225555555555544
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.5e-17 Score=178.13 Aligned_cols=264 Identities=14% Similarity=0.079 Sum_probs=178.0
Q ss_pred HHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHH
Q 045882 193 EVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 193 ~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
+..+| |+|++|+.+...+...+... ..++.+..|..++...... .+.......+-.+|.+.+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33455 99999998822222222221 1478888887665432111 0111123345567888777765441110
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK 352 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~ 352 (832)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 0112356778999998765421 12467899999999999999999
Q ss_pred HHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcC
Q 045882 353 LLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAE 432 (832)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~AD 432 (832)
++|++++.+.+|+++ |+.+|.. ++...++ +++.+.+ ..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~----~~~~~~~-------~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGDG-----PEREALE----ALIKELG-------LEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeCC-----CCHHHHH----HHHHHcC-------CCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988888765 8877742 2322233 3333332 2233444444 789999999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C---CceEeCCCCHHHHHHHHHH
Q 045882 433 CCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S---GAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 433 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~---~a~~VnP~d~~~~A~ai~~ 508 (832)
++++||..||||++++|||+|+ .|+|+|+..|..+.+ . .|+++++.|+++++++|.+
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 315 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAFG-------------------LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR 315 (348)
T ss_pred EEEeCccccccCHHHHHHHHcC-------------------CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH
Confidence 9999999999999999999994 468999876655444 2 5899999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 541 (832)
+++.+ +.++...++.++.+..++....+++|.
T Consensus 316 ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 316 LMEDE-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHcCH-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 99844 444444555577788888888777664
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-17 Score=187.31 Aligned_cols=268 Identities=11% Similarity=0.074 Sum_probs=164.1
Q ss_pred HHHHhCCCCCEEEEeCcccccH---HHHHHhhcCCCeEEEEecCCCCChhhhhcCC--chHHHHHHHHhCCEEeecChhh
Q 045882 191 IMEVINPEEDYVWIHDYHLMVL---PTFLRRRFHRVKLGFFLHSPFPSSEIYRTLP--VRNEILKALLNADLIGFHTFDY 265 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~ll---p~~lr~~~~~~~ig~flH~PfP~~e~~r~lp--~r~~il~~ll~~dligf~t~~~ 265 (832)
+++..+| |+|++|+.-.+.. ...+++++ .. +..++|+.|+. +++... .....+...+. .+
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~--Y~~~~~~g~~~~~l~~~~~---------~~ 175 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLE--YVKREKNGRVKAFLLKYIN---------SW 175 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHH--HHHHhccchHHHHHHHHHH---------HH
Confidence 3445567 8999998766665 34455555 34 77799998853 222111 11122221111 12
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--CC--CEEEEEec
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KG--KKVIVGVD 341 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--~~vil~Vd 341 (832)
++.| .|+.++..+....+ +... +...+.|||.+.|.+... . +++.+ .+ .+++++||
T Consensus 176 ~~r~--~~d~vi~pS~~~~~------l~~~---~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vG 235 (462)
T PLN02846 176 VVDI--YCHKVIRLSAATQD------YPRS---IICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIG 235 (462)
T ss_pred HHHH--hcCEEEccCHHHHH------HhhC---EEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEe
Confidence 2212 13333333221100 0001 112357999998864321 1 11222 12 35799999
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCH
Q 045882 342 DMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPL 421 (832)
Q Consensus 342 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~ 421 (832)
||.+.||+..+|+||.++.+..|+++ |+++| +|++.+++++.+. +.+ .. ++++.+..+.
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~----~l~-------l~-~~vf~G~~~~ 294 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAE----KLE-------LD-VRVYPGRDHA 294 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHH----hcC-------Cc-EEEECCCCCH
Confidence 99999999999999999988888765 88887 5666655555444 332 11 3345664443
Q ss_pred HHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--CceEeCCCC
Q 045882 422 HEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--GAIRVNPWD 498 (832)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--~a~~VnP~d 498 (832)
+ ++|+.+||||+||.+||||+|.+|||||+ .|+|+++..| .+.+ + +|+.+ .|
T Consensus 295 ~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G-------------------~PVVa~~~~~-~~~v~~~~ng~~~--~~ 349 (462)
T PLN02846 295 D---PLFHDYKVFLNPSTTDVVCTTTAEALAMG-------------------KIVVCANHPS-NEFFKQFPNCRTY--DD 349 (462)
T ss_pred H---HHHHhCCEEEECCCcccchHHHHHHHHcC-------------------CcEEEecCCC-cceeecCCceEec--CC
Confidence 3 69999999999999999999999999994 4688888776 4556 2 35666 48
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 499 IDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 499 ~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
.++++++|.++|+.++++... +.+ ..+++..-+++|++.+.
T Consensus 350 ~~~~a~ai~~~l~~~~~~~~~---~a~---~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 350 GKGFVRATLKALAEEPAPLTD---AQR---HELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHHHccCchhHHH---HHH---HhCCHHHHHHHHHHHhc
Confidence 999999999999854432211 111 35666666666665443
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.4e-17 Score=177.40 Aligned_cols=262 Identities=16% Similarity=0.197 Sum_probs=177.3
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~F 269 (832)
++++..+| |+|++|.+..+.++.+...+...+++.+.+|-.++.. +....+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhcc---CCCEEEEeCHHHHHHH
Confidence 44455566 8999998865544443333334689999999655322 11111111 1277777776555544
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
... + ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~~-----~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VAN-----G---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HHc-----C---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 321 1 00236788999999987653210 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|+..+.+ |+++ |+++|... +....+... + ..+.+.+.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~-----------~---~~~~v~~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL-----------E---GDPRVEFLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh-----------c---CCCeEEEeCCCCHHHHHHHHH
Confidence 999999998876 5544 88887432 211111111 1 112345567899999999999
Q ss_pred hcCcceeccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHH
Q 045882 430 LAECCIVNAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (832)
Q Consensus 430 ~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~a 505 (832)
.||++++||. .||++++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 322 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAG-------------------VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAA 322 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCC-------------------CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHH
Confidence 9999999997 799999999999994 4699999999888883 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 506 LHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
|.++++ .++.++...++.++.+.. ..+++.+++
T Consensus 323 i~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 323 LERLID-DPDLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 999998 444444545555555443 444444443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.3e-17 Score=183.32 Aligned_cols=240 Identities=13% Similarity=0.115 Sum_probs=163.7
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhc-CCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRF-HRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARH 268 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~-~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~ 268 (832)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 44566676 899999988777767666543 23455666776554322111 12235688887776655444
Q ss_pred HHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecccc--cc
Q 045882 269 FLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMD--IF 346 (832)
Q Consensus 269 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld--~~ 346 (832)
+.. .++. ..++.++|+|||.+.+... .+ ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 431 1211 1246678999997654311 01 013467899999996 45
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC--CHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV--PLHEK 424 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v--~~~el 424 (832)
||+..+++|+.++ .+ ++.|+++|. |++.++ +++++++.|.. ..|.+ .+.+ +.+++
T Consensus 195 k~~~~l~~a~~~~---~~----~~~l~ivG~-----g~~~~~----l~~~~~~~~l~------~~v~f-~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQT---TG----EWQLHIIGD-----GSDFEK----CKAYSRELGIE------QRIIW-HGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhh---CC----CeEEEEEeC-----CccHHH----HHHHHHHcCCC------CeEEE-ecccCCcHHHH
Confidence 9999999999876 22 355888884 344333 44444443321 12444 4444 55899
Q ss_pred HHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc-CccccccCC---CceEeCCCCHH
Q 045882 425 TAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE-FIGCSPSLS---GAIRVNPWDID 500 (832)
Q Consensus 425 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~s~~l~---~a~~VnP~d~~ 500 (832)
..+|+.||++|+||..||||++++|||||+ .|+|+|+ .+|+.+.+. .|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-------------------~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYG-------------------IPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcC-------------------CCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 999999999999999999999999999994 4699999 888888773 48999999999
Q ss_pred HHHHHHHHHhcCCH
Q 045882 501 AVADALHDAITMSD 514 (832)
Q Consensus 501 ~~A~ai~~aL~m~~ 514 (832)
++|++|.+.++.++
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999998664
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.6e-17 Score=175.50 Aligned_cols=274 Identities=16% Similarity=0.135 Sum_probs=189.5
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHH-----HHHHhCCEEeecChhhH
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEIL-----KALLNADLIGFHTFDYA 266 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il-----~~ll~~dligf~t~~~~ 266 (832)
++..+| |+|++|..+..++..++++.....++.+.+|...+... .. +....++ ..+-.+|.+.+.+....
T Consensus 76 ~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 150 (359)
T cd03808 76 LRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SG--GLKRRLYLLLERLALRFTDKVIFQNEDDR 150 (359)
T ss_pred HHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cc--hhHHHHHHHHHHHHHhhccEEEEcCHHHH
Confidence 344566 89999988888887777775667778888886532211 10 1011111 22445789888888777
Q ss_pred HHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecccccc
Q 045882 267 RHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIF 346 (832)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~ 346 (832)
+.+.+.- ... ....+.+.|+|+|...+..... . ...++..++++||+.+.
T Consensus 151 ~~~~~~~----~~~--------------~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~ 200 (359)
T cd03808 151 DLALKLG----IIK--------------KKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKD 200 (359)
T ss_pred HHHHHhc----CCC--------------cCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccc
Confidence 7665320 000 1234567899999887653211 0 12467899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
||+..+++|++.+.+++|+++ |+.+|.... .+ ..... ++.+.+. ...|.+++ . .+++..
T Consensus 201 k~~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~~~~------~~~v~~~g-~--~~~~~~ 259 (359)
T cd03808 201 KGIDELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEKLGL------EGRVEFLG-F--RDDVPE 259 (359)
T ss_pred cCHHHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHhcCC------cceEEEee-c--cccHHH
Confidence 999999999999988888765 888875431 11 11111 1222111 12355544 3 678999
Q ss_pred HHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHH
Q 045882 427 YYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVA 503 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A 503 (832)
+|+.||++++||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|+++++.|+++++
T Consensus 260 ~~~~adi~i~ps~~e~~~~~~~Ea~~~G-------------------~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~ 320 (359)
T cd03808 260 LLAAADVFVLPSYREGLPRVLLEAMAMG-------------------RPVIATDVPGCREAVIDGVNGFLVPPGDAEALA 320 (359)
T ss_pred HHHhccEEEecCcccCcchHHHHHHHcC-------------------CCEEEecCCCchhhhhcCcceEEECCCCHHHHH
Confidence 9999999999999999999999999994 4699999999988883 38999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhh-hhcCCHHHHHHHHH
Q 045882 504 DALHDAITMSDVEKQLRHEKHYRY-ICSHDVAYWAHSFM 541 (832)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l 541 (832)
++|.+++..+ +.+....++.+++ ...++...+++.++
T Consensus 321 ~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 321 DAIERLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999988744 4444555556666 57788888877664
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-16 Score=180.59 Aligned_cols=273 Identities=12% Similarity=0.044 Sum_probs=172.9
Q ss_pred CCEEEEeCcccc--cHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchH---HH---HHH--HHhCCEEeecChhhHHH
Q 045882 199 EDYVWIHDYHLM--VLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRN---EI---LKA--LLNADLIGFHTFDYARH 268 (832)
Q Consensus 199 ~d~vwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~---~i---l~~--ll~~dligf~t~~~~~~ 268 (832)
.|+|++|..... .+...+-.+..+.|+.+.+|--+++..-. ..+... .+ ++. .-.||.|...+....+.
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~ 174 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKED 174 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHH
Confidence 399999985532 22233333445789999999644321101 011000 11 111 12367776666544333
Q ss_pred HHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHH---------H--------c
Q 045882 269 FLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIRE---------Q--------F 331 (832)
Q Consensus 269 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~---------~--------~ 331 (832)
+.+ .+ ....+|.++|+| +...|.+... ........+ . -
T Consensus 175 l~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
T cd03816 175 LQQ-----FN---------------NWKIRATVLYDR-PPEQFRPLPL----EEKHELFLKLAKTFLTRELRIGAVQLSE 229 (415)
T ss_pred HHh-----hh---------------ccCCCeeecCCC-CHHHceeCcH----HHHHHHHHhccccccccccccccceecC
Confidence 321 11 112467788999 4566653211 111111111 0 1
Q ss_pred CCCEEEEEeccccccCCHHHHHHHHHHHHHh------CCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC
Q 045882 332 KGKKVIVGVDDMDIFKGISLKLLAMEQLLKV------HPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG 405 (832)
Q Consensus 332 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~ 405 (832)
++..++++++|+.+.||+..+++|+..+.+. +|++ .|+++|. |++.++++ +++++.
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i----~l~ivG~-----G~~~~~l~----~~~~~~----- 291 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKL----LCIITGK-----GPLKEKYL----ERIKEL----- 291 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCE----EEEEEec-----CccHHHHH----HHHHHc-----
Confidence 2456888999999999999999999998764 3544 4888883 34433444 444432
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcCcceec---ccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCc
Q 045882 406 VPGYEPVILIDRPVPLHEKTAYYALAECCIVN---AVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFI 482 (832)
Q Consensus 406 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvt---S~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 482 (832)
+...++++.+.++.+++..+|++||++|++ +..+||+++++|||||+ .|+|+|...
T Consensus 292 --~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G-------------------~PVI~s~~~ 350 (415)
T cd03816 292 --KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG-------------------LPVCALDFK 350 (415)
T ss_pred --CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC-------------------CCEEEeCCC
Confidence 223588888889999999999999999864 33588999999999994 469999999
Q ss_pred cccccCC---CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 483 GCSPSLS---GAIRVNPWDIDAVADALHDAITMS--DVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 483 G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~--~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
|+.+.+. +|++|+ |++++|++|.++++.+ +++++.+.++.+++.. .+|...+.+
T Consensus 351 ~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 351 CIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred CHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 9888883 488884 9999999999999972 5666666666666654 346555543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=174.68 Aligned_cols=211 Identities=14% Similarity=0.092 Sum_probs=148.8
Q ss_pred hCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCC
Q 045882 254 NADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKG 333 (832)
Q Consensus 254 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~ 333 (832)
.+|.|...+......+.+. +.. ...++.++|+|||.+.|.+... ...+
T Consensus 94 ~ad~ii~~S~~~~~~l~~~-----g~~--------------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~ 141 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYTS-----GLK--------------IPQPIYVIPHNLNPRMFEYKPK-------------EKPH 141 (331)
T ss_pred cCCEEEECCHHHHHHHHHc-----CCC--------------CCCCEEEECCCCCHHHcCCCcc-------------ccCC
Confidence 4788887776655554321 111 0125677999999988753210 0134
Q ss_pred CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q 045882 334 KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVI 413 (832)
Q Consensus 334 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~ 413 (832)
+.++++++|+.+.||++.+++|++++.+++|+++ |+.+|.. .. +. ++. +..+
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~~-----~~--~~--~l~----------~~~~----- 193 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSSN-----ML--DP--RLF----------GLNG----- 193 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeCc-----cc--ch--hhc----------cccc-----
Confidence 5677778899999999999999999998888765 8888721 11 11 110 1011
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---C
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---G 490 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~ 490 (832)
+.+.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+|..+|.++.+. +
T Consensus 194 -~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G-------------------~PVIas~~gg~~E~i~~~~n 253 (331)
T PHA01630 194 -VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG-------------------LDVVVTEKGAWSEWVLSNLD 253 (331)
T ss_pred -eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC-------------------CCEEEeCCCCchhhccCCCc
Confidence 1346889999999999999999999999999999999994 4799999988888773 2
Q ss_pred --------------------ceEeCCCCHHHHHHHHHHHhcCC-HHHHHHHHH-HHHhhhhcCCHHHHHHHHHHHHH
Q 045882 491 --------------------AIRVNPWDIDAVADALHDAITMS-DVEKQLRHE-KHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 491 --------------------a~~VnP~d~~~~A~ai~~aL~m~-~~e~~~r~~-~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
|++++| |.+++++++.++|..+ +++++++.. ....+..+++....++.+++-++
T Consensus 254 g~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 254 VYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred eEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 444455 7788999999999764 233444333 44556778999999998887664
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=173.67 Aligned_cols=258 Identities=15% Similarity=0.117 Sum_probs=172.7
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHH-HHHHHHhCCEEeecChhhHHHHHHHHHHHhC
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNE-ILKALLNADLIGFHTFDYARHFLSCCSRMLG 278 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~-il~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 278 (832)
|+|++|+...+.....+... .+.+..+++|........+. ..... .-+.+..+|.+...+..+.+.+.. . +
T Consensus 85 Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~-~ 156 (357)
T cd03795 85 DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV----L-R 156 (357)
T ss_pred CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----h-c
Confidence 89999986654332222222 46788888996432221110 11111 223466788888877766654421 0 0
Q ss_pred CcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHH
Q 045882 279 LDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQ 358 (832)
Q Consensus 279 ~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 358 (832)
....++.++|+|+|...+.... .. .........++++|+++||+.+.||+..+++|+++
T Consensus 157 ---------------~~~~~~~~i~~gi~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~ 215 (357)
T cd03795 157 ---------------RFRDKVRVIPLGLDPARYPRPD-----AL-EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAA 215 (357)
T ss_pred ---------------CCccceEEecCCCChhhcCCcc-----hh-hhHhhcCCCCCcEEEEecccccccCHHHHHHHHHh
Confidence 0013567799999988765321 11 11111122467899999999999999999999988
Q ss_pred HHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecc
Q 045882 359 LLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNA 438 (832)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS 438 (832)
+. ++.|+.+|.+ +... ++.+++.+.+ ..+-+.+.+.++.+++..+|+.||++++||
T Consensus 216 l~--------~~~l~i~G~g-----~~~~----~~~~~~~~~~-------~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 216 LP--------DAPLVIVGEG-----PLEA----ELEALAAALG-------LLDRVRFLGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred cc--------CcEEEEEeCC-----hhHH----HHHHHHHhcC-------CcceEEEcCCCCHHHHHHHHHhCCEEEeCC
Confidence 74 4558888742 3322 3333333322 223345567999999999999999999999
Q ss_pred c--ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC----CceEeCCCCHHHHHHHHHHHhcC
Q 045882 439 V--RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS----GAIRVNPWDIDAVADALHDAITM 512 (832)
Q Consensus 439 ~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~----~a~~VnP~d~~~~A~ai~~aL~m 512 (832)
. .||+|++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|+++++++|.++++.
T Consensus 272 ~~~~e~~g~~~~Ea~~~g-------------------~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 272 VERSEAFGIVLLEAMAFG-------------------KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED 332 (357)
T ss_pred cccccccchHHHHHHHcC-------------------CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC
Confidence 6 599999999999994 4699999998887762 37899999999999999999984
Q ss_pred CHHHHHHHHHHHHhhhhc
Q 045882 513 SDVEKQLRHEKHYRYICS 530 (832)
Q Consensus 513 ~~~e~~~r~~~~~~~v~~ 530 (832)
+++++...++.++++.+
T Consensus 333 -~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 333 -PELRERLGEAARERAEE 349 (357)
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 45555555666666644
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-15 Score=172.16 Aligned_cols=189 Identities=13% Similarity=0.110 Sum_probs=135.3
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEeccccccCCHHHHH----HHHHHHHHhCCCccCcEEE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMDIFKGISLKL----LAMEQLLKVHPELQGKLVL 372 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRld~~KGi~~~l----~A~~~ll~~~P~~~~~vvL 372 (832)
++.++|+|||.+.|.+....+ ..+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 567789999999886422100 111 3567899999999999999887 56667777889877 8
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceeccc-ccCCCCcceeee
Q 045882 373 VQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAV-RDGMNLMPYKYT 451 (832)
Q Consensus 373 vqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~ 451 (832)
+++|.. ++ . +++++. .. ..|.+ .|.++ ++..+|+.||++|+||. .||++++++|||
T Consensus 263 ~ivG~g-----~~-~----~~~~l~----~~------~~V~~-~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGAK-----PS-P----AVRALA----AL------PGVTV-TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECCC-----Ch-H----HHHHhc----cC------CCeEE-eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 888743 22 1 222221 11 12544 55665 68999999999999996 699999999999
Q ss_pred eeecCCCCchhhhhhhcCCCCCceEEeccCccccccC--CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-
Q 045882 452 ICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI- 528 (832)
Q Consensus 452 a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v- 528 (832)
||+ .|+|+|..++..... ..|+++. .|++++|++|.++++. ++.++...++.++++
T Consensus 320 a~G-------------------~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~ 378 (397)
T TIGR03087 320 AMA-------------------KPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVL 378 (397)
T ss_pred HcC-------------------CCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHH
Confidence 994 468888764321111 2478885 8999999999999974 455566667778877
Q ss_pred hcCCHHHHHHHHHHHH
Q 045882 529 CSHDVAYWAHSFMQDL 544 (832)
Q Consensus 529 ~~~~~~~W~~~~l~~l 544 (832)
..+++...++++.+-+
T Consensus 379 ~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 379 QHYHWPRNLARLDALL 394 (397)
T ss_pred HhCCHHHHHHHHHHHh
Confidence 4688888888876654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.9e-16 Score=169.25 Aligned_cols=247 Identities=17% Similarity=0.128 Sum_probs=166.4
Q ss_pred HHhCCCCCEEEEeCc-ccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHH
Q 045882 193 EVINPEEDYVWIHDY-HLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 193 ~~~~~~~d~vwvhDy-hl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~ 271 (832)
...++ |+|++|++ ...++..+. .+. +.++.+.+|..++...... .+........+..+|.+.+.+....+.+.+
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLALLA-ARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHHHHH-hhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 33456 89999998 444444444 333 7899999998775432111 111112334566788888877766655543
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHH
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISL 351 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~ 351 (832)
.. +. ...++.++|+|+|...+..... ... ......++.+++++||+++.||+..
T Consensus 153 ~~----~~---------------~~~~~~vi~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----GI---------------PPDKIEVIYNPIDIEEIRALAE-----EPL--ELGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----cC---------------CccccEEecCCcChhhcCcccc-----hhh--hcCCCCCceEEEEEecchhhcChHH
Confidence 21 10 1236777999999887753221 000 0011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 045882 352 KLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALA 431 (832)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~A 431 (832)
+++|+.++.+++|+++ |+.+|.. +...+++ +++.+.+.. ..|.+ .+. .+++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~----~~~~~~~~~------~~v~~-~g~--~~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGDG-----PLREELE----ALAKELGLA------DRVHF-LGF--QSNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcCC-----ccHHHHH----HHHHhcCCC------ccEEE-ecc--cCCHHHHHHhC
Confidence 9999999988877665 8888742 3333333 333433221 12444 444 35788999999
Q ss_pred CcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHH
Q 045882 432 ECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 432 Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~ 508 (832)
|+++.||..||||++++|||+|+ .|+|+|+.+|..+.+. .|+++++.|.+++++++..
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~ 325 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMALG-------------------TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALA 325 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHhC-------------------CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHH
Confidence 99999999999999999999994 4699999999888873 4899999999999544444
Q ss_pred Hhc
Q 045882 509 AIT 511 (832)
Q Consensus 509 aL~ 511 (832)
+..
T Consensus 326 i~~ 328 (353)
T cd03811 326 LLD 328 (353)
T ss_pred HHh
Confidence 443
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.7e-16 Score=170.84 Aligned_cols=244 Identities=15% Similarity=0.142 Sum_probs=161.1
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCC----Chhhh-hcCCc-------------hHHHHHHHHhCCEEee
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFP----SSEIY-RTLPV-------------RNEILKALLNADLIGF 260 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP----~~e~~-r~lp~-------------r~~il~~ll~~dligf 260 (832)
.|+|+++..... ...+ ..+..+..+++|.|.+ ..+.+ ...+. +....+.+..+|.|..
T Consensus 84 ~D~v~~~~~~~~--~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSHAVA--KGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCcHHh--cccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 489977643222 1222 4557788888998631 11111 11110 0111223467788887
Q ss_pred cChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEe
Q 045882 261 HTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGV 340 (832)
Q Consensus 261 ~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~V 340 (832)
.+....+.+... .+ . ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~~----------------~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----YG----------------R--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----hC----------------C--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 777666555321 11 1 124678999988775211 234579999
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCC
Q 045882 341 DDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420 (832)
Q Consensus 341 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~ 420 (832)
||+.+.||++.+++|++++ | ++ |+.+|. +++.+++++ .. . ..|.+ .+.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~----~----~~V~~-~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA----G----PNVTF-LGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc----C----CCEEE-ecCCC
Confidence 9999999999999999865 3 44 888873 333333332 10 1 12554 56899
Q ss_pred HHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--CceEeCCC
Q 045882 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--GAIRVNPW 497 (832)
Q Consensus 421 ~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--~a~~VnP~ 497 (832)
.+++.++|+.||++++||. ||||++++|||+|+ .|+|+|..+|..+.+ . .|++++|.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G-------------------~Pvi~~~~~~~~e~i~~~~~G~~~~~~ 311 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMASG-------------------TPVIAYGKGGALETVIDGVTGILFEEQ 311 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcC-------------------CCEEEeCCCCCcceeeCCCCEEEeCCC
Confidence 9999999999999999999 99999999999994 469999999988877 3 48999999
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 498 DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 498 d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
|++++|++|..+++.++.. .+.+++....++..+..+
T Consensus 312 ~~~~la~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~~ 348 (351)
T cd03804 312 TVESLAAAVERFEKNEDFD----PQAIRAHAERFSESRFRE 348 (351)
T ss_pred CHHHHHHHHHHHHhCcccC----HHHHHHHHHhcCHHHHHH
Confidence 9999999999999876421 223334444455444444
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-15 Score=165.28 Aligned_cols=246 Identities=15% Similarity=0.068 Sum_probs=161.1
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHH
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFL 270 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl 270 (832)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++.... .........+.+-+-+......+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 3344455 8999999888876 2 334567899999977643211 122333344443332222211110
Q ss_pred HHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHH
Q 045882 271 SCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGIS 350 (832)
Q Consensus 271 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~ 350 (832)
. . .++.++|+|+|++.|... ..++..++++||+.+.||+.
T Consensus 148 --------------------~---~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 --------------------P---L-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred --------------------c---c-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHH
Confidence 0 0 356789999999887531 13466899999999999999
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
.+++|+.+ ++++ |+++|... +...+...+.+... + .+-+.+.|.++.+++..+|+.
T Consensus 188 ~li~~~~~-----~~~~----l~i~G~~~-----~~~~~~~~~~~~~~-~---------~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AGIP----LKLAGPVS-----DPDYFYREIAPELL-D---------GPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cCCe----EEEEeCCC-----CHHHHHHHHHHhcc-c---------CCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 3444 88887432 21222222222210 0 122344568999999999999
Q ss_pred cCcceeccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHH
Q 045882 431 AECCIVNAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADAL 506 (832)
Q Consensus 431 ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai 506 (832)
||++|+||. .||||++++|||||+ .|+|+|+.+|..+.+. +|+++++ +++++++|
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~G-------------------~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l 302 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMACG-------------------TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAV 302 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhcC-------------------CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHH
Confidence 999999997 599999999999994 4799999999988883 4889987 99999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhh-hhcCCHHHHHHHHHH
Q 045882 507 HDAITMSDVEKQLRHEKHYRY-ICSHDVAYWAHSFMQ 542 (832)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l~ 542 (832)
.+++..+.+ +.++. ...++...-++++++
T Consensus 303 ~~l~~~~~~-------~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 303 ARADRLDRA-------ACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHHhccHHH-------HHHHHHHHhCCHHHHHHHHHH
Confidence 998765322 11222 244566655555544
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-15 Score=167.20 Aligned_cols=264 Identities=14% Similarity=0.024 Sum_probs=169.3
Q ss_pred CEEEEeCcccc--cHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHH-----HHHHhCCEEeecChhhHHHHHHH
Q 045882 200 DYVWIHDYHLM--VLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEIL-----KALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 200 d~vwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il-----~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
|+++||..... .+..++++ .+.++.+.+|..-.....+.. + ...++ ..+..+|.|...+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLKE- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH-
Confidence 56666655444 33333333 367888888852111111110 1 11111 2345688888777644444321
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--CCCEEEEEeccccccCCHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKVIVGVDDMDIFKGIS 350 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~VdRld~~KGi~ 350 (832)
..+ ... .++|+|+|...+.. ....++.+ ..++.++++||+.+.||+.
T Consensus 161 ---~~~----------------~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 161 ---KYG----------------RDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ---hcC----------------CCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 111 111 57899999876542 01112222 3456788999999999999
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
.+++|+.++.. ++.|+++|... +..++.+.+.+ +++. .+-+.+.+.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~-------~~~~---~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE-------KAAA---DPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH-------HhCC---CCcEEEccccChHHHHHHHHh
Confidence 99999987632 34588888542 11223333332 1121 123345678999999999999
Q ss_pred cCcceecccc-cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHH
Q 045882 431 AECCIVNAVR-DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 431 ADv~vvtS~~-EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~ 508 (832)
||++++||.. ||||++++|||+|+ .|+|+|..+|..+.+ .+|..++|.|. +|++|.+
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G-------------------~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~ 326 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYG-------------------CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEE 326 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcC-------------------CCEEEecCCccceeecCCeeEecCchH--HHHHHHH
Confidence 9999999999 99999999999994 479999999888877 45888888776 9999999
Q ss_pred HhcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSFMQD 543 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~ 543 (832)
+++.++ .+....++.++++. .+++..-++++++.
T Consensus 327 l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 361 (363)
T cd04955 327 LEADPE-EVSAMAKAARERIREKYTWEKIADQYEEL 361 (363)
T ss_pred HHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 998663 34444455566655 47877777777654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.7e-15 Score=165.39 Aligned_cols=193 Identities=15% Similarity=0.146 Sum_probs=139.7
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccc--cCCHHHHHHHHHHHHHh-CCCccCcEE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDI--FKGISLKLLAMEQLLKV-HPELQGKLV 371 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~--~KGi~~~l~A~~~ll~~-~P~~~~~vv 371 (832)
++.++|+|||...+.+.. . ...++.+ .++.+++.+++... .||+..+++|++.+.++ .|+ +.
T Consensus 160 ~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~~ 227 (365)
T cd03825 160 PIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----IE 227 (365)
T ss_pred ceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----eE
Confidence 677899999998774321 1 1223333 34566666666654 89999999999988765 444 44
Q ss_pred EEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCC-HHHHHHHHHhcCcceecccccCCCCcceee
Q 045882 372 LVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP-LHEKTAYYALAECCIVNAVRDGMNLMPYKY 450 (832)
Q Consensus 372 Lvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~-~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 450 (832)
++.+|... .... . .. . ..|. +.+.++ .+++..+|+.||+++.||..||||++++||
T Consensus 228 ~~i~G~~~-----~~~~---~------~~----~----~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Ea 284 (365)
T cd03825 228 LVVFGASD-----PEIP---P------DL----P----FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEA 284 (365)
T ss_pred EEEeCCCc-----hhhh---c------cC----C----CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHH
Confidence 88887432 1100 0 00 0 1244 455677 889999999999999999999999999999
Q ss_pred eeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 045882 451 TICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRY 527 (832)
Q Consensus 451 ~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~ 527 (832)
|+|+ .|+|+|..+|..+.+. .|+++++.|.+++|++|.++++.+ +++....++.+++
T Consensus 285 m~~g-------------------~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~ 344 (365)
T cd03825 285 LACG-------------------TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAAREL 344 (365)
T ss_pred HhcC-------------------CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Confidence 9994 4699999988888873 489999999999999999999744 4455555566666
Q ss_pred h-hcCCHHHHHHHHHHHHH
Q 045882 528 I-CSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 528 v-~~~~~~~W~~~~l~~l~ 545 (832)
+ ..++....++.+++-.+
T Consensus 345 ~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 345 AENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHhcCHHHHHHHHHHHHh
Confidence 6 45788888888776554
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.2e-15 Score=168.05 Aligned_cols=239 Identities=11% Similarity=-0.004 Sum_probs=155.1
Q ss_pred hCCCCCEEEEeCccccc--HHHHHHhhcCCCeEEEEecCCCCChhhhhc-C---Cch----HHHHHH-HHhCCEEeecCh
Q 045882 195 INPEEDYVWIHDYHLMV--LPTFLRRRFHRVKLGFFLHSPFPSSEIYRT-L---PVR----NEILKA-LLNADLIGFHTF 263 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~l--lp~~lr~~~~~~~ig~flH~PfP~~e~~r~-l---p~r----~~il~~-ll~~dligf~t~ 263 (832)
.+| |+|++|..+.+. ++..+-.+..++|+.+.+|..+.+ .+.. . +.. ..+-+. .-.+|.|...+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 355 899999877532 233333334467888889965321 1100 0 000 111111 234677777776
Q ss_pred hhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccc
Q 045882 264 DYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDM 343 (832)
Q Consensus 264 ~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRl 343 (832)
...+...+. . |.. +.++|+|+ .+.|.+... . ..++ .+...++++++|+
T Consensus 175 ~~~~~l~~~----~----------------g~~--i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQN----W----------------GIR--ATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHHh----c----------------CCC--eEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCce
Confidence 555544210 0 111 56788884 466643211 0 1111 1345688899999
Q ss_pred cccCCHHHHHHHHHHHHH-----------------hCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCC
Q 045882 344 DIFKGISLKLLAMEQLLK-----------------VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGV 406 (832)
Q Consensus 344 d~~KGi~~~l~A~~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~ 406 (832)
.+.||+..+++|+..+.. ++|++ .|+++| +|++.+++++.++ +. |
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i----~l~ivG-----~G~~~~~l~~~~~----~~----~- 284 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRL----LFIITG-----KGPQKAMYEEKIS----RL----N- 284 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCe----EEEEEe-----CCCCHHHHHHHHH----Hc----C-
Confidence 999999999999988752 34554 499888 4455444544443 32 2
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcCcceecc---cccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc
Q 045882 407 PGYEPVILIDRPVPLHEKTAYYALAECCIVNA---VRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG 483 (832)
Q Consensus 407 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS---~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (832)
...++++.+.++.+++..+|+.||+||+++ ..|||+++.+|||||+ .|+|+|..+|
T Consensus 285 --l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G-------------------~PVVa~~~gg 343 (371)
T PLN02275 285 --LRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG-------------------LPVCAVSYSC 343 (371)
T ss_pred --CCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC-------------------CCEEEecCCC
Confidence 234777787889999999999999999753 2489999999999994 4699999989
Q ss_pred ccccCC---CceEeCCCCHHHHHHHHHHHh
Q 045882 484 CSPSLS---GAIRVNPWDIDAVADALHDAI 510 (832)
Q Consensus 484 ~s~~l~---~a~~VnP~d~~~~A~ai~~aL 510 (832)
..+.+. +|++|+ |++++|++|.++|
T Consensus 344 ~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 344 IGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred hHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 888873 488986 6999999998765
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-14 Score=165.70 Aligned_cols=275 Identities=17% Similarity=0.192 Sum_probs=171.6
Q ss_pred HHHHHHHhCCCCCEEEEeCcccccHHHHHHh-hcCCCeEEEEecCCCC-ChhhhhcCCchHHHHHHHH-hCCEEeecChh
Q 045882 188 ADKIMEVINPEEDYVWIHDYHLMVLPTFLRR-RFHRVKLGFFLHSPFP-SSEIYRTLPVRNEILKALL-NADLIGFHTFD 264 (832)
Q Consensus 188 a~~v~~~~~~~~d~vwvhDyhl~llp~~lr~-~~~~~~ig~flH~PfP-~~e~~r~lp~r~~il~~ll-~~dligf~t~~ 264 (832)
..++++.++| |+|++|.+.++ |.+++. +..++++....|.-.+ +...|+.+ ..+.+.++ .+|.|..++..
T Consensus 116 ~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~ 188 (425)
T PRK05749 116 VRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEE 188 (425)
T ss_pred HHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHH
Confidence 4455677788 89999988764 555533 2335667665553222 22222222 22333333 47999999988
Q ss_pred hHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEeccc
Q 045882 265 YARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDM 343 (832)
Q Consensus 265 ~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRl 343 (832)
..+.+.+ +|+. .. +.++|++ +.+.+. .+........+++.+ .++++++++++.
T Consensus 189 ~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~----~~~~~~~~~~~r~~~~~~~~vil~~~~~ 242 (425)
T PRK05749 189 DAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEV----PPELAARAATLRRQLAPNRPVWIAASTH 242 (425)
T ss_pred HHHHHHH-----cCCC---------------CC-cEecccc-cccCCC----ChhhHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 8877653 2321 11 3345542 222211 111122344566666 678889999875
Q ss_pred cccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC-CCC-c----ccEEEecC
Q 045882 344 DIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG-VPG-Y----EPVILIDR 417 (832)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~-~~~-~----~pv~~~~~ 417 (832)
.|+...+++||.++++++|+++ |+++| ++++. .+++++++++.+..+. ..+ . ...+++.+
T Consensus 243 --~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~ 308 (425)
T PRK05749 243 --EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGD 308 (425)
T ss_pred --chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEe
Confidence 6889999999999998899876 87776 34442 1234444444332210 000 0 01223332
Q ss_pred CCCHHHHHHHHHhcCccee-cccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccc----ccC-CCc
Q 045882 418 PVPLHEKTAYYALAECCIV-NAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCS----PSL-SGA 491 (832)
Q Consensus 418 ~v~~~el~aly~~ADv~vv-tS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s----~~l-~~a 491 (832)
+..|+..+|+.||++++ +|..||+|++++|||+|+ .|+|++...|.. +.+ .+|
T Consensus 309 --~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G-------------------~PVI~g~~~~~~~e~~~~~~~~g 367 (425)
T PRK05749 309 --TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG-------------------VPVISGPHTFNFKEIFERLLQAG 367 (425)
T ss_pred --cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC-------------------CCEEECCCccCHHHHHHHHHHCC
Confidence 36799999999999666 678899999999999994 468887654432 232 457
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcC
Q 045882 492 IRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 492 ~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (832)
.++.|.|.+++|++|.++++ .++.+....++.++++.++
T Consensus 368 ~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 368 AAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred CeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhC
Confidence 88889999999999999997 4556666677778888765
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.3e-14 Score=162.94 Aligned_cols=262 Identities=19% Similarity=0.197 Sum_probs=180.7
Q ss_pred CEEEEeCcccccHHHHHHhh---cCCCeEEEEecCC-----CC-ChhhhhcCCc---h---------HHHH-HHHHhCCE
Q 045882 200 DYVWIHDYHLMVLPTFLRRR---FHRVKLGFFLHSP-----FP-SSEIYRTLPV---R---------NEIL-KALLNADL 257 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~---~~~~~ig~flH~P-----fP-~~e~~r~lp~---r---------~~il-~~ll~~dl 257 (832)
|||++||||+.|+|.++++. ...++..|+.|.= |+ ...-.-.||. . -..+ -|+..||.
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~ 211 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADA 211 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccE
Confidence 99999999999999999997 7789999999932 23 1111123341 0 0122 24666677
Q ss_pred EeecChhhHHHHHHHHHHHhCCcccccCcee-eEEEcCeEEEEEEeecCCCchHHHhhcCC-----------CChHHHHH
Q 045882 258 IGFHTFDYARHFLSCCSRMLGLDYESKRGYI-GLEYFGRTIYVKILHVGIHMGRLESALNH-----------PSSSIKVK 325 (832)
Q Consensus 258 igf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~-~~~~~gr~~~i~i~P~GId~~~~~~~~~~-----------~~~~~~~~ 325 (832)
|.--++.|+..-.. ...| .|.. .+.+ +.-.+.-+=+|||...+.+.... +.......
T Consensus 212 vttVSptYa~Ei~t---~~~g------~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 212 VTTVSPTYAGEIYT---PEYG------EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEECHHHHHhhcc---cccc------ccchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 76666666654430 0000 0000 0111 11344445677777765432110 01222334
Q ss_pred HHHHHc--C---CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 045882 326 EIREQF--K---GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRI 400 (832)
Q Consensus 326 ~l~~~~--~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i 400 (832)
.|++.+ . +.+++..|+|++..||++.+++|++.++++. ++ ||.+|.+ + ..++..+..+++++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g------d-~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG------D-PELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC------c-HHHHHHHHHHHHhc
Confidence 455665 2 4699999999999999999999999999987 55 7878743 1 35777888888887
Q ss_pred hcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc
Q 045882 401 NETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480 (832)
Q Consensus 401 N~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (832)
..++. +.-..+..-...+|+.||++++||..|++||+-+++|.- ++++|+.+
T Consensus 348 ~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-------------------GtvpIv~~ 399 (487)
T COG0297 348 PGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-------------------GTLPIVRE 399 (487)
T ss_pred CceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-------------------CCcceEcc
Confidence 65432 222344556678999999999999999999999999997 56899999
Q ss_pred CccccccCC-----------CceEeCCCCHHHHHHHHHHHhcCC
Q 045882 481 FIGCSPSLS-----------GAIRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 481 ~~G~s~~l~-----------~a~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.+|.++.+. .|+++.|.|.++++.||.+|+..-
T Consensus 400 tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y 443 (487)
T COG0297 400 TGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLY 443 (487)
T ss_pred cCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHh
Confidence 999999883 278888889999999999999753
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.1e-15 Score=147.28 Aligned_cols=143 Identities=23% Similarity=0.370 Sum_probs=112.4
Q ss_pred CCCEEEEEeccccccCCHHHHHHHHHHHHHh-CCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 332 KGKKVIVGVDDMDIFKGISLKLLAMEQLLKV-HPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 332 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+.+|. ++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccc----ccccccccccccc------c
Confidence 5789999999999999999999999999875 66655 888872 2222 2333333333221 1
Q ss_pred cEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C
Q 045882 411 PVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S 489 (832)
Q Consensus 411 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~ 489 (832)
.+.++. .++.+++.++|+.||++|.||..||+|++++|||+| +.|+|+|..+|..+.+ +
T Consensus 74 ~i~~~~-~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 74 NIIFLG-YVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-------------------GCPVIASDIGGNNEIIND 133 (172)
T ss_dssp TEEEEE-SHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-------------------T-EEEEESSTHHHHHSGT
T ss_pred cccccc-cccccccccccccceecccccccccccccccccccc-------------------ccceeeccccCCceeecc
Confidence 255554 566899999999999999999999999999999999 4589999988888887 2
Q ss_pred --CceEeCCCCHHHHHHHHHHHhcCC
Q 045882 490 --GAIRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 490 --~a~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.|++++|.|+++++++|.+++..+
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 379999999999999999999865
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-12 Score=145.31 Aligned_cols=266 Identities=14% Similarity=0.118 Sum_probs=165.2
Q ss_pred hCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCc-hHHHHHHHHhCCEEeecChhhHHHHHHHH
Q 045882 195 INPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPV-RNEILKALLNADLIGFHTFDYARHFLSCC 273 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~-r~~il~~ll~~dligf~t~~~~~~Fl~~~ 273 (832)
.+.++.++|.+..-+..+... .+..++.+-+|-.|+..... -+. ....-+.+-.||+|...+....+.+..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 354457888875555444333 45677777766555432211 011 111223456789988777655543311
Q ss_pred HHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHH
Q 045882 274 SRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKL 353 (832)
Q Consensus 274 ~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l 353 (832)
+ + .++.++|+|+|.+.|......+.. .+.+. ..++++|+++|+++..+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~~--~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADLA--ALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHHh--cCCCCEEEEEeccccccCHH-HH
Confidence 1 1 246679999999999753321111 11111 14678999999999966654 33
Q ss_pred HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCc
Q 045882 354 LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAEC 433 (832)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv 433 (832)
. .+.+.+|+++ |+.||... ...+ . ..+ . ....|++ .+.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~--~~~~---~----~~~----~------~~~nV~~-~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD--VSID---P----SAL----L------RLPNVHY-LGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc--CccC---h----hHh----c------cCCCEEE-eCCCCHHHHHHHHHhCCE
Confidence 3 3445688886 88888431 0011 0 111 0 0122554 568999999999999999
Q ss_pred ceeccc-----ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHH
Q 045882 434 CIVNAV-----RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 434 ~vvtS~-----~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~ 508 (832)
+++|+. +.++++..+|||||+. |+|+|.+.++.+.. ++..+.+.|.++++++|.+
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G~-------------------PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~ 336 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAGK-------------------PVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEK 336 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccCC-------------------CEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHH
Confidence 999985 4578999999999954 68888766554433 3444556799999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
+|..+..++..+. .+.+.+|++..=++.+++.|.
T Consensus 337 ~l~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 337 ALLEDGPARERRR---LRLAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHhcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHH
Confidence 8865544333222 226788888887887776554
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1e-12 Score=129.72 Aligned_cols=192 Identities=20% Similarity=0.245 Sum_probs=123.9
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC--CCceEEEeCCEEEEeCCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC--ENLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~~l~liaenGa~i~~~~~ 655 (832)
..++||+|+||||+++. -+..|.. ..|.+| ++.|..|+++|..++..+..+-..+ +..++|+|||+.|+.+.+
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~~pA~---pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEWQPAA---PVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKG 80 (274)
T ss_pred cceEEEEcccCcccCCC-CCCCccc---hHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEeccc
Confidence 46899999999999933 2333433 455566 5779999999999999988877665 468999999999998743
Q ss_pred ccEEEc--Cc-------ccchh-HHHHHHHHHHHHHhcCCceEEee----------------------cceeEEEEeccC
Q 045882 656 SEWETS--TV-------AADFE-WKRITEPVMKLYTEATDGSYIEK----------------------KETALVWHYQDA 703 (832)
Q Consensus 656 ~~w~~~--~~-------~~~~~-w~~~v~~i~~~~~e~~~gs~ie~----------------------k~~~l~~~~~~a 703 (832)
|... .+ ..... -.+.+.+.++...+...-.+..+ ++++.+...+.
T Consensus 81 --~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs- 157 (274)
T COG3769 81 --WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRS- 157 (274)
T ss_pred --ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecc-
Confidence 1110 00 00010 01233344433333222112111 11111111111
Q ss_pred CCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHc
Q 045882 704 APGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI 783 (832)
Q Consensus 704 d~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a 783 (832)
..+...++...+...++.+..|..+..|......||.|++.+++.+...+- ..-++..||+.||.+||+..
T Consensus 158 --------~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~ 228 (274)
T COG3769 158 --------SDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVM 228 (274)
T ss_pred --------cchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhh
Confidence 123445556666666788899999999989998999999999997644332 22599999999999999999
Q ss_pred ccc
Q 045882 784 SQA 786 (832)
Q Consensus 784 ~~~ 786 (832)
..+
T Consensus 229 d~A 231 (274)
T COG3769 229 DYA 231 (274)
T ss_pred hhh
Confidence 853
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-13 Score=145.85 Aligned_cols=188 Identities=16% Similarity=0.162 Sum_probs=143.5
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEeccccccCCHH
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMDIFKGIS 350 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRld~~KGi~ 350 (832)
...|.+.+++.++.+.+ +.-.-..-+|.++|+-++...|.+.... +. .+...|+.++||-+.||++
T Consensus 145 ~id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiD 211 (426)
T KOG1111|consen 145 NIDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGID 211 (426)
T ss_pred CCCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchH
Confidence 34566677887776542 2222234578899999999999864321 22 3558999999999999999
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
+++..+.++.++||+.+ ++.+| +||....+++.+++. +. +.+|++ .|.++++++...|..
T Consensus 212 ll~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~l------~~rV~~-lG~v~h~~Vr~vl~~ 271 (426)
T KOG1111|consen 212 LLLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----FL------QDRVVM-LGTVPHDRVRDVLVR 271 (426)
T ss_pred HHHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh----hc------cCceEE-ecccchHHHHHHHhc
Confidence 99999999999999988 88887 555433444443333 11 135665 558999999999999
Q ss_pred cCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCc-eEeCCCCHHHHHHHHHHH
Q 045882 431 AECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGA-IRVNPWDIDAVADALHDA 509 (832)
Q Consensus 431 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a-~~VnP~d~~~~A~ai~~a 509 (832)
-|||+.||+.|.|+++..||+.|+. ++|.+..+|..+.|... +..-+-.++++++++.+|
T Consensus 272 G~IFlntSlTEafc~~ivEAaScGL-------------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~a 332 (426)
T KOG1111|consen 272 GDIFLNTSLTEAFCMVIVEAASCGL-------------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKA 332 (426)
T ss_pred CcEEeccHHHHHHHHHHHHHHhCCC-------------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHH
Confidence 9999999999999999999999954 58888888888888544 435555788999999998
Q ss_pred hc
Q 045882 510 IT 511 (832)
Q Consensus 510 L~ 511 (832)
++
T Consensus 333 i~ 334 (426)
T KOG1111|consen 333 IT 334 (426)
T ss_pred HH
Confidence 86
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.38 E-value=5e-11 Score=134.70 Aligned_cols=191 Identities=13% Similarity=0.092 Sum_probs=123.5
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCCHHHHHHHHHHHHHh----CCCccCcE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKGISLKLLAMEQLLKV----HPELQGKL 370 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~----~P~~~~~v 370 (832)
+|.+++++|+...+... + ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 45557888876433211 1 123456666 4688999999999999999999999876522 34332
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceee
Q 045882 371 VLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKY 450 (832)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 450 (832)
++.+++ +++ ++++++++... + ..|.+ .+.+ +++..||++||++|.+| .++++.||
T Consensus 244 -~~vi~G----~~~---~~~~~L~~~~~------~----~~v~~-~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 -VVVICG----RNK---KLQSKLESRDW------K----IPVKV-RGFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred -EEEEEC----CCH---HHHHHHHhhcc------c----CCeEE-Eecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 333442 222 23333333210 1 12444 4455 47999999999999865 37899999
Q ss_pred eeeecCCCCchhhhhhhcCCCCCceEEeccC-----ccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 045882 451 TICRQGTPKMDEAMELASVCPRTSMLVISEF-----IGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKH 524 (832)
Q Consensus 451 ~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~s~~l-~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~ 524 (832)
|+|+. |+|++.. .|.++.+ .++.-+.+.|+++++++|.+++..+++.++.+.++.
T Consensus 299 ma~g~-------------------PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIRGL-------------------PIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHcCC-------------------CEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99954 6888875 2333444 344344468999999999999986455666666677
Q ss_pred HhhhhcCCHHHHHHHHHH
Q 045882 525 YRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 525 ~~~v~~~~~~~W~~~~l~ 542 (832)
+++...+....-++.+++
T Consensus 360 ~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 360 LKLARPEAVFDIVHDLHE 377 (382)
T ss_pred HHhcCCchHHHHHHHHHH
Confidence 777777766665554443
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-10 Score=130.42 Aligned_cols=185 Identities=12% Similarity=0.107 Sum_probs=139.6
Q ss_pred CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCc-EEEEEEecC-CCCChhHHHHHHHHHHHHHHHHhcccCCCCccc
Q 045882 334 KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGK-LVLVQIVNP-ARSTGKDVQDAKLETYTITKRINETYGVPGYEP 411 (832)
Q Consensus 334 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~-vvLvqi~~p-~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~p 411 (832)
..++..+.|+.+-||+...|.||..+...-|+..-. .-++..+++ +.+...+..++..++.+++++.+.. | .
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~-g-----~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL-G-----Q 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc-C-----c
Confidence 688999999999999999999999998887652222 223434432 3344455566777888888775321 2 3
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--- 488 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--- 488 (832)
++++..+.++.+...+++.+.+..+++..|.||+|++|||+|+. |+|++..+|..+.+
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~gl-------------------PvvAt~~GGP~EiV~~~ 407 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGL-------------------PVVATNNGGPAEIVVHG 407 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCC-------------------CEEEecCCCceEEEEcC
Confidence 56666678888887777888888888888999999999999954 69999999999999
Q ss_pred CCceEeCCCCHH---HHHHHHHHHhcCCHHHHHHHHHHHHhhhhc-CCHHHHHHHHHHHHHHHHH
Q 045882 489 SGAIRVNPWDID---AVADALHDAITMSDVEKQLRHEKHYRYICS-HDVAYWAHSFMQDLERACR 549 (832)
Q Consensus 489 ~~a~~VnP~d~~---~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~ 549 (832)
.+|++++| +.+ .+|++|.+..+.++. +....++.++.|.+ ++. +.|.+.+.....
T Consensus 408 ~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 408 VTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSW----QHYSERIASVLG 466 (495)
T ss_pred CcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhH----HHHHHHHHHHhH
Confidence 35999999 666 599999999986554 77777788888887 554 555555554433
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.4e-10 Score=117.25 Aligned_cols=112 Identities=17% Similarity=0.182 Sum_probs=81.8
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCC
Q 045882 339 GVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRP 418 (832)
Q Consensus 339 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~ 418 (832)
++||+.+.||+..+++|+..+.+++|+++ ++.+|... +....+..+.. .+. ...|.++...
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~--------~~~--~~~v~~~~~~ 169 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAA--------LLL--LDRVIFLGGL 169 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHh--------cCC--cccEEEeCCC
Confidence 99999999999999999999998888765 88888432 11111111111 111 1236555532
Q ss_pred CCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC
Q 045882 419 VPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL 488 (832)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l 488 (832)
.+.+++..+++.||+++.||..||++++++|||+|+ .|+|+|+..|..+.+
T Consensus 170 ~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g-------------------~pvi~s~~~~~~e~i 220 (229)
T cd01635 170 DPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG-------------------LPVIATDVGGPPEIV 220 (229)
T ss_pred CcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC-------------------CCEEEcCCCCcceEE
Confidence 355666677777999999999999999999999994 479999999887755
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.6e-10 Score=120.37 Aligned_cols=198 Identities=19% Similarity=0.233 Sum_probs=139.5
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCC--CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKG--KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQI 375 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~--~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (832)
.+.+.|.|++...+.... .....+ ..++++++|+++.||+...++|+..+.+..|+ +.++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~ 236 (381)
T COG0438 173 KIVVIPNGIDTEKFAPAR------------IGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIV 236 (381)
T ss_pred CceEecCCcCHHHcCccc------------cCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEE
Confidence 566789999998876320 000112 47999999999999999999999999887776 347777
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeec
Q 045882 376 VNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 376 ~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
|..... ...+..++.+.+.. ..|.+ .+.++.+++..+|+.||+++.||..||+|++..|||+|+
T Consensus 237 g~~~~~--------~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g- 300 (381)
T COG0438 237 GDGPER--------REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG- 300 (381)
T ss_pred cCCCcc--------HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC-
Confidence 644311 12222343333221 12444 667888899999999999999999999999999999984
Q ss_pred CCCCchhhhhhhcCCCCCceEEeccCccccccCCC---ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcC
Q 045882 456 GTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSG---AIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSH 531 (832)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~---a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~ 531 (832)
.|+|+|...|..+.+.. |+++++.|.+++++++..++++. +.++...+..++.+ ..+
T Consensus 301 ------------------~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~ 361 (381)
T COG0438 301 ------------------TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEF 361 (381)
T ss_pred ------------------CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhc
Confidence 46899999988888843 77888888999999999999876 33333333233333 466
Q ss_pred CHHHHHHHHHHHHHH
Q 045882 532 DVAYWAHSFMQDLER 546 (832)
Q Consensus 532 ~~~~W~~~~l~~l~~ 546 (832)
++..-+..+..-+..
T Consensus 362 ~~~~~~~~~~~~~~~ 376 (381)
T COG0438 362 SWERIAEQLLELYEE 376 (381)
T ss_pred CHHHHHHHHHHHHHH
Confidence 666666555544444
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.6e-09 Score=118.51 Aligned_cols=271 Identities=10% Similarity=0.079 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecC
Q 045882 183 ANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHT 262 (832)
Q Consensus 183 vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t 262 (832)
.+..-..++++..+| |+|..| +....++.+.+....++++....+-..+... ++ .-.+|.+...+
T Consensus 91 ~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~----------~~--~~~ad~i~~~s 155 (380)
T PRK13609 91 FGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHKI----------WV--HREVDRYFVAT 155 (380)
T ss_pred HHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCcc----------cc--cCCCCEEEECC
Confidence 333445566677788 899885 6666777776666656666533321111100 01 11588888777
Q ss_pred hhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCch-HHHhhcCCCChHHHHHHHHHHc---CCC-EEE
Q 045882 263 FDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMG-RLESALNHPSSSIKVKEIREQF---KGK-KVI 337 (832)
Q Consensus 263 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~~-~vi 337 (832)
....+.+.+ .|+. ..++.++ |++.. .|... .+ ...+++++ +++ .++
T Consensus 156 ~~~~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~~il 206 (380)
T PRK13609 156 DHVKKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELK---IN----PDIIYNKYQLCPNKKILL 206 (380)
T ss_pred HHHHHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCc---CC----HHHHHHHcCCCCCCcEEE
Confidence 554444332 1221 1123233 44332 23211 11 12345555 244 456
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecC
Q 045882 338 VGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDR 417 (832)
Q Consensus 338 l~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~ 417 (832)
+..|++...||+...++++. +.|+++ ++.++.. .+ .+++++++++++.+ ..|+++ +
T Consensus 207 ~~~G~~~~~k~~~~li~~l~----~~~~~~----~viv~G~---~~----~~~~~l~~~~~~~~--------~~v~~~-g 262 (380)
T PRK13609 207 IMAGAHGVLGNVKELCQSLM----SVPDLQ----VVVVCGK---NE----ALKQSLEDLQETNP--------DALKVF-G 262 (380)
T ss_pred EEcCCCCCCcCHHHHHHHHh----hCCCcE----EEEEeCC---CH----HHHHHHHHHHhcCC--------CcEEEE-e
Confidence 66799999999998888864 235554 7766532 12 23344444443321 236665 4
Q ss_pred CCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc-Ccccc----ccC-CCc
Q 045882 418 PVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE-FIGCS----PSL-SGA 491 (832)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~s----~~l-~~a 491 (832)
.+ +++..+|++||++|. ++.|++++|||+|+. |+|++. ..|.. ..+ ..|
T Consensus 263 ~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~-------------------PvI~~~~~~g~~~~n~~~~~~~G 317 (380)
T PRK13609 263 YV--ENIDELFRVTSCMIT----KPGGITLSEAAALGV-------------------PVILYKPVPGQEKENAMYFERKG 317 (380)
T ss_pred ch--hhHHHHHHhccEEEe----CCCchHHHHHHHhCC-------------------CEEECCCCCCcchHHHHHHHhCC
Confidence 54 468899999999874 455899999999954 577765 44421 122 234
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 492 IRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 492 ~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
..+.+.|.++++++|.++++. ++.+..+.++.+++...++....++.+++.+...
T Consensus 318 ~~~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 318 AAVVIRDDEEVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred cEEEECCHHHHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 455578999999999999985 3444455555666777788888888887766543
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.6e-09 Score=121.08 Aligned_cols=257 Identities=14% Similarity=0.061 Sum_probs=156.4
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~F 269 (832)
++++..+| |+|+.|+....+... +..+..+.|+.++.|..+|.. -+.++ .-.+|.+...+..- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---h
Confidence 44555666 999999866554444 444556788887766544421 01111 11345443333210 0
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
. . ....++.++|+|+|.+.+.+ +.. ..++ ..-.+.++|+.+++....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 11236778999999876542 110 1111 111367889999999999998
Q ss_pred HHHH-HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 045882 350 SLKL-LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYY 428 (832)
Q Consensus 350 ~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly 428 (832)
..++ +|+.++.+. | .+++++|.+ +. +++.+.++ .+ .. |.+. +.+ +++..+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~g-----~~-~~~~~~~~---------~~---~~-v~~~-g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGKG-----DL-EEVRAAYA---------AG---IN-AEVV-PFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCCC-----cH-HHHHHHhh---------cC---Cc-EEEe-ehH--hhHHHHH
Confidence 7776 888777432 2 346666632 21 22222211 12 12 4443 443 6899999
Q ss_pred HhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc--------ccccC---CCceEeCCC
Q 045882 429 ALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG--------CSPSL---SGAIRVNPW 497 (832)
Q Consensus 429 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--------~s~~l---~~a~~VnP~ 497 (832)
+.||+++.+| | +.+.+|||+|+. |+|++...| .++.+ ..|++++|.
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g~-------------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~ 307 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAGL-------------------PAILVPLPHAADDHQTANARALVDAGAALLIPQS 307 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhCC-------------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcc
Confidence 9999999877 3 588999999955 466654432 12334 247889888
Q ss_pred C--HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 498 D--IDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 498 d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
| +++++++|.++++. ++.++...+..+++..+.....-++.+++.+
T Consensus 308 ~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 308 DLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 8 99999999999986 4555555666677777787777777776654
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.14 E-value=3e-09 Score=118.20 Aligned_cols=248 Identities=17% Similarity=0.154 Sum_probs=146.8
Q ss_pred HHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHH
Q 045882 188 ADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYAR 267 (832)
Q Consensus 188 a~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~ 267 (832)
+.++++..+| |+|+.|..... ++..+..+..++++.++-|..||.. . +.++ ...+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhh
Confidence 3345566677 89999976553 3444444455677766555545421 0 1111 1125666655543222
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEecccc
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMD 344 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld 344 (832)
. + ...++.++|+|+|.+.+... + . ++++ .++++++.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11255678999998776531 0 1 2333 4677888888888
Q ss_pred ccCCHHHHH-HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHH
Q 045882 345 IFKGISLKL-LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHE 423 (832)
Q Consensus 345 ~~KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~e 423 (832)
..|+...++ .|++.+. + ++ +.++.++. ++ +.+++++.+ ++. + ..|++++ .+ ++
T Consensus 192 ~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~~~~----~~~----~----~~v~~~g-~~--~~ 245 (350)
T cd03785 192 GARAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVKKAY----EEL----G----VNYEVFP-FI--DD 245 (350)
T ss_pred hHHHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHHHHH----hcc----C----CCeEEee-hh--hh
Confidence 888877654 7776664 2 22 23333331 22 233344333 221 1 1255444 33 78
Q ss_pred HHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc--------ccccC---CCce
Q 045882 424 KTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG--------CSPSL---SGAI 492 (832)
Q Consensus 424 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--------~s~~l---~~a~ 492 (832)
+..+|+.||++|.+| | +.+++|||+|+. |+|++...| .++.+ ..|+
T Consensus 246 ~~~~l~~ad~~v~~s---g-~~t~~Eam~~G~-------------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~ 302 (350)
T cd03785 246 MAAAYAAADLVISRA---G-ASTVAELAALGL-------------------PAILIPLPYAADDHQTANARALVKAGAAV 302 (350)
T ss_pred HHHHHHhcCEEEECC---C-HhHHHHHHHhCC-------------------CEEEeecCCCCCCcHHHhHHHHHhCCCEE
Confidence 999999999999876 3 578999999955 567665433 12334 2478
Q ss_pred EeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHH
Q 045882 493 RVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVA 534 (832)
Q Consensus 493 ~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~ 534 (832)
+++|. |.++++++|.+++. +++.++...++.++++..+...
T Consensus 303 ~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~ 345 (350)
T cd03785 303 LIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAE 345 (350)
T ss_pred EEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHH
Confidence 99887 89999999999996 4555555556666666655433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.1e-09 Score=116.27 Aligned_cols=181 Identities=12% Similarity=0.077 Sum_probs=114.5
Q ss_pred EEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH-HHHHHHHHHhCCCccCcEEEEEEecC
Q 045882 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK-LLAMEQLLKVHPELQGKLVLVQIVNP 378 (832)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~-l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (832)
.++|+|+|...+... .. ..++ ..-+++++|++++|....|++... +.|++++.+. +++ ++.++.
T Consensus 153 ~~i~n~v~~~~~~~~----~~---~~~~-~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g- 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----VP---RERF-GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG- 217 (348)
T ss_pred eEEcCCcCHHHhccc----ch---hhhc-CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC-
Confidence 568999997655321 00 1111 011467889999998888987664 4788777542 222 333432
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCC
Q 045882 379 ARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTP 458 (832)
Q Consensus 379 ~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~ 458 (832)
+++. +++ ++.+++.+ ...++.+. .. ++..+|+.||++|.+| | +.+++|||+|+.
T Consensus 218 ---~~~~-~~l----~~~~~~~~-------l~~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~--- 271 (348)
T TIGR01133 218 ---KNDL-EKV----KNVYQELG-------IEAIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAAGV--- 271 (348)
T ss_pred ---cchH-HHH----HHHHhhCC-------ceEEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHcCC---
Confidence 2221 233 33333321 12233333 22 7899999999999865 4 689999999954
Q ss_pred CchhhhhhhcCCCCCceEEeccCcccc-------ccC---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 045882 459 KMDEAMELASVCPRTSMLVISEFIGCS-------PSL---SGAIRVNPWD--IDAVADALHDAITMSDVEKQLRHEKHYR 526 (832)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~s-------~~l---~~a~~VnP~d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~ 526 (832)
|+|++.+.|.. +.+ ..|++++|.| +++++++|.+.++ +++.++.+.++.++
T Consensus 272 ----------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 272 ----------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARK 334 (348)
T ss_pred ----------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHh
Confidence 57777665422 234 2488898876 9999999999996 45556666777788
Q ss_pred hhhcCCHHHHHH
Q 045882 527 YICSHDVAYWAH 538 (832)
Q Consensus 527 ~v~~~~~~~W~~ 538 (832)
++..+...++++
T Consensus 335 ~~~~~~~~~i~~ 346 (348)
T TIGR01133 335 LAKPDAAKRIAE 346 (348)
T ss_pred cCCccHHHHHHh
Confidence 887776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-08 Score=114.24 Aligned_cols=252 Identities=13% Similarity=0.140 Sum_probs=145.0
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHH--hCCEEeecC
Q 045882 185 KVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALL--NADLIGFHT 262 (832)
Q Consensus 185 ~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll--~~dligf~t 262 (832)
..|++ +++..+| |+|++|......+...+-.+..++|+...-+-. -+...+. |+.+++.+-+. .||++.-.+
T Consensus 76 ~~l~~-~l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEE-LLLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHH-HHHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 34444 3455577 999999655554544444444467776432211 0111111 22233323222 267766667
Q ss_pred hhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcC--CCEEEEEe
Q 045882 263 FDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFK--GKKVIVGV 340 (832)
Q Consensus 263 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~--~~~vil~V 340 (832)
....+++++ +|.+ ..+|.++++|+....+..... + ....+++++. +..+++..
T Consensus 150 ~~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~~~~-~----~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTNVEI-A----YSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHHHhh-c----cchhHHHhcCCCCCEEEEec
Confidence 666666642 1322 235777888863222221111 0 1233445553 23444455
Q ss_pred cccc-ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC
Q 045882 341 DDMD-IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419 (832)
Q Consensus 341 dRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v 419 (832)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.+ +. ...|.++ +++
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~----~~--~~~v~~~-~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHL----GD--SKRVHLI-EPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHh----CC--CCCEEEE-CCC
Confidence 5653 45899999999999998888775 66655432 12 1122 22222 11 1235554 578
Q ss_pred CHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEec-cCccccccC-CC-ceEeCC
Q 045882 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS-EFIGCSPSL-SG-AIRVNP 496 (832)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~s~~l-~~-a~~VnP 496 (832)
+..++..+|+.||+++.+| |.+..|||+|+. |+|.+ ..+|..+.+ .+ ++++ |
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~-------------------PvI~~~~~~~~~e~~~~g~~~lv-~ 318 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK-------------------PVLVLRDTTERPETVEAGTNKLV-G 318 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC-------------------CEEECCCCCCChHHHhcCceEEe-C
Confidence 8999999999999998887 445799999954 56765 555555444 23 5566 6
Q ss_pred CCHHHHHHHHHHHhcCC
Q 045882 497 WDIDAVADALHDAITMS 513 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m~ 513 (832)
.|+++++++|.++++.+
T Consensus 319 ~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 319 TDKENITKAAKRLLTDP 335 (365)
T ss_pred CCHHHHHHHHHHHHhCh
Confidence 89999999999998743
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.9e-08 Score=114.12 Aligned_cols=271 Identities=9% Similarity=0.062 Sum_probs=153.6
Q ss_pred HHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHH
Q 045882 188 ADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYAR 267 (832)
Q Consensus 188 a~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~ 267 (832)
..++++..+| |+|.++ +....+..+.+++..++|+. +.++-+-.... ++ --.+|.+-..+....+
T Consensus 96 l~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~-~v~td~~~~~~---------w~--~~~~d~~~v~s~~~~~ 160 (391)
T PRK13608 96 LINLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVA-TVMTDYRLHKN---------WI--TPYSTRYYVATKETKQ 160 (391)
T ss_pred HHHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEE-EEeCCCCcccc---------cc--cCCCCEEEECCHHHHH
Confidence 4455566788 888886 22223333333344466764 34444411100 01 1247887776655444
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CC-CEEEEEeccc
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KG-KKVIVGVDDM 343 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~-~~vil~VdRl 343 (832)
.+.+ .|++ ..+|.+.++.|+. .|... .+ ..++++++ ++ +.++++.||+
T Consensus 161 ~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~---~~----~~~~~~~~~l~~~~~~ilv~~G~l 212 (391)
T PRK13608 161 DFID-----VGID---------------PSTVKVTGIPIDN-KFETP---ID----QKQWLIDNNLDPDKQTILMSAGAF 212 (391)
T ss_pred HHHH-----cCCC---------------HHHEEEECeecCh-Hhccc---cc----HHHHHHHcCCCCCCCEEEEECCCc
Confidence 4432 1221 1133344555553 33311 11 12334444 23 4566789999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHH
Q 045882 344 DIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHE 423 (832)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~e 423 (832)
...||+..+++++ ++..|+++ ++.+++ ..+ ++.+++.+. .+. . ..|.++ +.+ ++
T Consensus 213 g~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~----~--~~v~~~-G~~--~~ 266 (391)
T PRK13608 213 GVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS----N--ENVLIL-GYT--KH 266 (391)
T ss_pred ccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc----C--CCeEEE-ecc--ch
Confidence 9999999999885 34456554 665652 222 122333222 211 1 125443 444 57
Q ss_pred HHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC------CCceEeCCC
Q 045882 424 KTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL------SGAIRVNPW 497 (832)
Q Consensus 424 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l------~~a~~VnP~ 497 (832)
+..+|++||++|.. +.|++..|||+|+. |+|++...+..+.. ..|.-+.+.
T Consensus 267 ~~~~~~~aDl~I~k----~gg~tl~EA~a~G~-------------------PvI~~~~~pgqe~~N~~~~~~~G~g~~~~ 323 (391)
T PRK13608 267 MNEWMASSQLMITK----PGGITISEGLARCI-------------------PMIFLNPAPGQELENALYFEEKGFGKIAD 323 (391)
T ss_pred HHHHHHhhhEEEeC----CchHHHHHHHHhCC-------------------CEEECCCCCCcchhHHHHHHhCCcEEEeC
Confidence 99999999999863 45889999999955 57776433222211 223333366
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 045882 498 DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 498 d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (832)
|.++++++|.+.++. ++.+..+.++.++....++....++.+++.+...++.+
T Consensus 324 ~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 324 TPEEAIKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CHHHHHHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 999999999999974 45555666677777778888888888877776554433
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-09 Score=107.15 Aligned_cols=72 Identities=21% Similarity=0.225 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--cccccceEeCCh--hH-
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KPSKARYYLDDE--ED- 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~s~A~y~l~~~--~e- 819 (832)
+|..+++.+++++ |++++.++++||+.||++|++.++.+ |+|..+. .+..|+|++++. ++
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~------------~~v~~~~~~~~~~a~~i~~~~~~~g~ 140 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLS------------VAVADAHPLLIPRADYVTRIAGGRGA 140 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe------------EecCCcCHHHHHhCCEEecCCCCCcH
Confidence 4888999999998 99999999999999999999999864 4554443 256789998754 33
Q ss_pred HHHHHHHhhhhc
Q 045882 820 VLALLKGLAAAS 831 (832)
Q Consensus 820 V~~~L~~l~~~~ 831 (832)
+.++++.+..+.
T Consensus 141 ~~~~~~~~~~~~ 152 (154)
T TIGR01670 141 VREVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHHHhh
Confidence 889999887653
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.5e-08 Score=111.42 Aligned_cols=252 Identities=13% Similarity=0.035 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecC--CCCChhhhhcCCchHHHHHHHHhCCEEeec
Q 045882 184 NKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHS--PFPSSEIYRTLPVRNEILKALLNADLIGFH 261 (832)
Q Consensus 184 N~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~--PfP~~e~~r~lp~r~~il~~ll~~dligf~ 261 (832)
...+.+.+.+. +| |+|++|++....++..+..+..++|+..+.|- .|- +..|+...-..-.-.+|++..-
T Consensus 77 ~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~~~ad~~~~~ 148 (363)
T cd03786 77 LIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAIDKLSDLHFAP 148 (363)
T ss_pred HHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHHHHhhhccCC
Confidence 33444444444 77 89999988776676666555557887765441 110 0012111000011135655544
Q ss_pred ChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCC-CchHHHhhcCCCChHHHHHHHHHHc---CCCEEE
Q 045882 262 TFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGI-HMGRLESALNHPSSSIKVKEIREQF---KGKKVI 337 (832)
Q Consensus 262 t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vi 337 (832)
+....+++.+ .|+ ...+|.++|+++ |...+..... +. ...++.+ .++.++
T Consensus 149 s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~~-----~~~~~~~~~~~~~~vl 202 (363)
T cd03786 149 TEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-KK-----ELILELLGLLPKKYIL 202 (363)
T ss_pred CHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-cc-----chhhhhcccCCCCEEE
Confidence 4444333321 121 223566677774 5443332111 00 1111222 345678
Q ss_pred EEeccccc---cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 045882 338 VGVDDMDI---FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVIL 414 (832)
Q Consensus 338 l~VdRld~---~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~ 414 (832)
+.++|+.. .||+..+++|++++.+. ++.++..+.+ +..+ ++++.+.+.+.. -..|.+
T Consensus 203 v~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~~-----~~~~----~l~~~~~~~~~~-----~~~v~~ 262 (363)
T cd03786 203 VTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNHP-----RTRP----RIREAGLEFLGH-----HPNVLL 262 (363)
T ss_pred EEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECCC-----ChHH----HHHHHHHhhccC-----CCCEEE
Confidence 89999875 79999999999887542 2335544422 2222 333333333210 012444
Q ss_pred ecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceE
Q 045882 415 IDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIR 493 (832)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~ 493 (832)
.+.....++..+|+.||++|.+|- | +..|+++|+. |+|++...+..+.+ ..|+.
T Consensus 263 -~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~-------------------PvI~~~~~~~~~~~~~~g~~ 317 (363)
T cd03786 263 -ISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV-------------------PVLNLRDRTERPETVESGTN 317 (363)
T ss_pred -ECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC-------------------CEEeeCCCCccchhhheeeE
Confidence 445678899999999999999984 4 4689999854 57777655544444 44544
Q ss_pred eCC-CCHHHHHHHHHHHhcCCH
Q 045882 494 VNP-WDIDAVADALHDAITMSD 514 (832)
Q Consensus 494 VnP-~d~~~~A~ai~~aL~m~~ 514 (832)
+.+ .|.++++++|.++++.+.
T Consensus 318 ~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 318 VLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EecCCCHHHHHHHHHHHhcCch
Confidence 433 379999999999998553
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.7e-09 Score=107.86 Aligned_cols=124 Identities=19% Similarity=0.237 Sum_probs=88.4
Q ss_pred cCcEEEEEecCCCcCCCC----CCCCCCCHHHH---HHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEE
Q 045882 577 TSRRAIFLDYDGTVVPHH----ALIKKPSRDVI---YVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYY 649 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~----~~~~~~s~~~~---~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~ 649 (832)
...|+|++|+||||++.. ......+.... .+++.| +++|+.++|+|||+...+.+.++.++-..+
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------- 90 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTLGITHL------- 90 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHcCCcee-------
Confidence 358999999999999731 01223333333 677888 568999999999999888877765420000
Q ss_pred EEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE
Q 045882 650 LRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVV 729 (832)
Q Consensus 650 i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~ 729 (832)
+ .|
T Consensus 91 --------f--------------------------~g------------------------------------------- 93 (183)
T PRK09484 91 --------Y--------------------------QG------------------------------------------- 93 (183)
T ss_pred --------e--------------------------cC-------------------------------------------
Confidence 0 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---
Q 045882 730 VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--- 806 (832)
Q Consensus 730 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--- 806 (832)
.-+|..+++.+++.+ |++++++++|||+.||++|++.++.. +.+++.
T Consensus 94 -------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~--------------~~v~~~~~~ 143 (183)
T PRK09484 94 -------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS--------------VAVADAHPL 143 (183)
T ss_pred -------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCChhHH
Confidence 013567889999998 99999999999999999999999853 334543
Q ss_pred -ccccceEeC
Q 045882 807 -PSKARYYLD 815 (832)
Q Consensus 807 -~s~A~y~l~ 815 (832)
...|.|+++
T Consensus 144 ~~~~a~~v~~ 153 (183)
T PRK09484 144 LLPRADYVTR 153 (183)
T ss_pred HHHhCCEEec
Confidence 356788885
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.2e-08 Score=97.83 Aligned_cols=197 Identities=18% Similarity=0.211 Sum_probs=137.1
Q ss_pred HhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC--CC-CceEEEeCCEE
Q 045882 573 AYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP--CE-NLGIAAEHGYY 649 (832)
Q Consensus 573 ~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~--l~-~l~liaenGa~ 649 (832)
++++-..-|+.+|.||||++ ...+.++++.+.|++| .+.+.+.++-|-..+.+.+.++. +. .++..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l--r~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL--RKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH--hhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 55666778999999999999 6788999999999998 35899999999999988888854 22 57789999998
Q ss_pred EEeCCCccEEEcCcc--cchhHHHHHHHHHHHHHhc----CCceEEeecceeEEEEe--ccC-----------CCCCCch
Q 045882 650 LRWTKKSEWETSTVA--ADFEWKRITEPVMKLYTEA----TDGSYIEKKETALVWHY--QDA-----------APGFGSC 710 (832)
Q Consensus 650 i~~~~~~~w~~~~~~--~~~~w~~~v~~i~~~~~e~----~~gs~ie~k~~~l~~~~--~~a-----------d~~~~~~ 710 (832)
-+..+...-...+.. .+...++.+.-++.+..+- ..|.+||-+...+.... |++ |....
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~-- 157 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHK-- 157 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhh--
Confidence 877654321111100 0112234444445555442 24899998876665432 222 11111
Q ss_pred hHHHHHHHHHHHhcCCCEEEE-EcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHH
Q 045882 711 QAKELLDHLESVLANEPVVVK-RGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFES 782 (832)
Q Consensus 711 ~a~el~~~l~~~l~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~ 782 (832)
--+.+.+.|++.++.+++... -|.-.++|.|.|++|-.-++.|-+. ..+.+-.||| +.||.+.|.-
T Consensus 158 iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~d 228 (252)
T KOG3189|consen 158 IREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFAD 228 (252)
T ss_pred hHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeC
Confidence 123466777888888887655 4567899999999999988887543 3588999999 5699888754
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.8e-07 Score=110.46 Aligned_cols=181 Identities=12% Similarity=0.128 Sum_probs=116.1
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHH--hCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLK--VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
+..++..|.|+...||+.+++.+++++++ ++|+ ..+.+|..|.+...+.. -.++.+.+.+++++ ..|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C--
Confidence 56689999999999999999999999986 5565 24667777754322211 12344455555442 0122 2
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccee-ccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC
Q 045882 411 PVILIDRPVPLHEKTAYYALAECCIV-NAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL 488 (832)
Q Consensus 411 pv~~~~~~v~~~el~aly~~ADv~vv-tS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l 488 (832)
.|+++.+ .+..--..+|+.||+++. ||. .|.-|+.-+-||.- |.|-.|-.-|...+.
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGEG 517 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCccccc
Confidence 4666653 445555578999999999 777 89988887777773 456666666655444
Q ss_pred ---CCceEeCC------------CCHHHHHHHHHHHh-c----CCH-----HHHHHHHHHHHhhhhcCCHHHHHHHHHHH
Q 045882 489 ---SGAIRVNP------------WDIDAVADALHDAI-T----MSD-----VEKQLRHEKHYRYICSHDVAYWAHSFMQD 543 (832)
Q Consensus 489 ---~~a~~VnP------------~d~~~~A~ai~~aL-~----m~~-----~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 543 (832)
.+|+.+.+ .|.+++-++|.+++ . -++ .-.+.+.+.|......+++.+-++.|.+.
T Consensus 518 ~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 518 YDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred CCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 24888875 88999999998877 2 111 11222222233333346777777766553
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.1e-08 Score=98.08 Aligned_cols=190 Identities=18% Similarity=0.230 Sum_probs=125.9
Q ss_pred HHHHHHhhccCCCeEEEEcCCChhhHHHHhc-C-C--CCceEEEeCCEEEEeCCCccEEEcCccc--chhHHHHHHHHHH
Q 045882 605 IYVLRELCGDSNNTTFIVSGRGKVSLGEWLA-P-C--ENLGIAAEHGYYLRWTKKSEWETSTVAA--DFEWKRITEPVMK 678 (832)
Q Consensus 605 ~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~-~-l--~~l~liaenGa~i~~~~~~~w~~~~~~~--~~~w~~~v~~i~~ 678 (832)
.++|.+|. +.+.|.|+||-......+.+. . + ...++.++||...+..+...|...+... +...++.+..+++
T Consensus 2 ~~~L~~L~--~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKLR--KKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHHH--TTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--hcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 56788883 479999999999999998884 2 1 1468999999999999888886654211 1122344444444
Q ss_pred HHHh----cCCceEEeecceeEEEEe--ccCC-----------CCCCchhHHHHHHHHHHHhcCCCEEEE-EcCeEEEEE
Q 045882 679 LYTE----ATDGSYIEKKETALVWHY--QDAA-----------PGFGSCQAKELLDHLESVLANEPVVVK-RGYNIVEVK 740 (832)
Q Consensus 679 ~~~e----~~~gs~ie~k~~~l~~~~--~~ad-----------~~~~~~~a~el~~~l~~~l~~~~~~v~-~g~~~vEV~ 740 (832)
+..+ ..-|.+||.+...+.+.. |+|. ++... -+.+.+.|.+.+.++.+.+. -|...++|.
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~i--R~~~v~~L~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKI--REKLVEALKKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTH--HHHHHHHHHHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhH--HHHHHHHHHHHCCCCceEEecCCceEEccc
Confidence 4433 124899999999888764 2221 11110 12466677777777778765 467899999
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCC
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDD 816 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~ 816 (832)
|+|++|..+++.|.+. ..+.+++||| +.||.++|...+. .+.+| .+
T Consensus 158 p~GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~V-----------~~ 207 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHTV-----------TS 207 (220)
T ss_dssp ETT-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SS
T ss_pred cCCccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEEe-----------CC
Confidence 9999999999988543 2799999999 5799999987643 34444 45
Q ss_pred hhHHHHHHHHhh
Q 045882 817 EEDVLALLKGLA 828 (832)
Q Consensus 817 ~~eV~~~L~~l~ 828 (832)
+++-++.|++|.
T Consensus 208 p~DT~~~l~~l~ 219 (220)
T PF03332_consen 208 PEDTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 777777777664
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.9e-08 Score=108.73 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=54.6
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEeC--ChhH
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYLD--DEED 819 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~--~~~e 819 (832)
..|+.+++.+++++ |++++++++|||+.||++|++.+|.+ +++ +++. +..|++.++ +-++
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGlg------------iA~-nAkp~Vk~~Ad~~i~~~~l~~ 310 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGLG------------IAY-HAKPKVNEQAQVTIRHADLMG 310 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCCe------------EEe-CCCHHHHhhCCEEecCcCHHH
Confidence 58999999999999 99999999999999999999999864 344 3321 578999996 4577
Q ss_pred HHHHHHH
Q 045882 820 VLALLKG 826 (832)
Q Consensus 820 V~~~L~~ 826 (832)
|+.+|..
T Consensus 311 ~l~~~~~ 317 (322)
T PRK11133 311 VLCILSG 317 (322)
T ss_pred HHHHhcc
Confidence 7777653
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.2e-07 Score=104.77 Aligned_cols=140 Identities=16% Similarity=0.181 Sum_probs=91.0
Q ss_pred HHHHHcC---CCEE-EEE-eccccccCC-HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHH
Q 045882 326 EIREQFK---GKKV-IVG-VDDMDIFKG-ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKR 399 (832)
Q Consensus 326 ~l~~~~~---~~~v-il~-VdRld~~KG-i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~ 399 (832)
.++++++ ++++ ++. -+|....|+ +...++|++.+.+++|+++ +++++.+ ++.. +++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~~----~~~~----~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLVN----PKRR----EQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCC----hhhH----HHHHHHHhh
Confidence 3445552 4444 333 347766554 6889999999988888765 7766531 2222 233333332
Q ss_pred HhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEec
Q 045882 400 INETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS 479 (832)
Q Consensus 400 iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~S 479 (832)
.. + . .+.++. .++..+|++||++|.+| |.+.+|+|+|+. |+|++
T Consensus 243 ~~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-------------------PvI~~ 286 (380)
T PRK00025 243 YA---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-------------------PMVVG 286 (380)
T ss_pred cC---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-------------------CEEEE
Confidence 10 1 1 144433 37899999999999998 677789999955 46655
Q ss_pred -----------------cCccccccCCC-----ceEeCCCCHHHHHHHHHHHhcCC
Q 045882 480 -----------------EFIGCSPSLSG-----AIRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 480 -----------------e~~G~s~~l~~-----a~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.+.|..+.+.+ +++++..|.+++++++.+.|+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 287 YKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred EccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 45555555532 36778889999999999999844
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.5e-08 Score=95.59 Aligned_cols=56 Identities=20% Similarity=0.230 Sum_probs=46.6
Q ss_pred EEEEecCCCcCCCCCC-----CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 581 AIFLDYDGTVVPHHAL-----IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~-----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+++||+||||.+..+. ...+.+.+.+.|++| ++.|+.++|+|||....+..+++.+
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~~ 61 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEEL 61 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHHc
Confidence 4899999999984321 127788999999999 5679999999999999999998764
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.77 E-value=1e-08 Score=97.56 Aligned_cols=128 Identities=20% Similarity=0.235 Sum_probs=89.2
Q ss_pred CEEEEEeccccccCCHHHHHH-HHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 334 KKVIVGVDDMDIFKGISLKLL-AMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 334 ~~vil~VdRld~~KGi~~~l~-A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
..++++.|++.+.||+..+++ |++++.+++|+++ |+.+|... + ++.++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS------------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H------HHHHh-cC----------CCE
Confidence 467999999999999999999 9999999999765 88888532 2 12222 00 136
Q ss_pred EEecCCCCHHHHHHHHHhcCcceeccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC--
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-- 489 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-- 489 (832)
.+.+ .+ +|+.++|+.||+++.|+. .+|++...+|||+++ .|+|+|.. |+...+.
T Consensus 56 ~~~g-~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G-------------------~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 56 RFHG-FV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG-------------------KPVIASDN-GAEGIVEED 112 (135)
T ss_dssp EEE--S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---------------------EEEEHH-HCHCHS---
T ss_pred EEcC-CH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC-------------------CCEEECCc-chhhheeec
Confidence 5544 55 689999999999999984 789999999999994 46888888 6666652
Q ss_pred -CceEeCCCCHHHHHHHHHHHhc
Q 045882 490 -GAIRVNPWDIDAVADALHDAIT 511 (832)
Q Consensus 490 -~a~~VnP~d~~~~A~ai~~aL~ 511 (832)
.++.+ +.|.++++++|.++++
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8999999999999874
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.2e-07 Score=96.98 Aligned_cols=182 Identities=9% Similarity=0.139 Sum_probs=132.3
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCC--ccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPE--LQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
....+|+++.+-|.|+.. .|+-+...+.++|. .-.++.|+++|. .|+ ++.++.-..++.++++++..-
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a~~L~i~~------ 337 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLAEELKIPK------ 337 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHHHhcCCcc------
Confidence 457899999999999999 77777788888887 334677887763 343 333455556677777765431
Q ss_pred cEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC--
Q 045882 411 PVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-- 488 (832)
Q Consensus 411 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-- 488 (832)
.|.| .-.+|.+++..+|..|-+.|-+-..|-||+.+.||||++. .+|+-.-+|..-.+
T Consensus 338 ~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl-------------------Ipi~h~SgGP~lDIV~ 397 (465)
T KOG1387|consen 338 HVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL-------------------IPIVHNSGGPLLDIVT 397 (465)
T ss_pred ceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc-------------------eEEEeCCCCCceeeee
Confidence 2444 5589999999999999999999999999999999999843 23333333321111
Q ss_pred --C---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHH
Q 045882 489 --S---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 489 --~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (832)
. .|++. | +.++.||++.+++++..+||....+..|..+.++.-+..-+.|...+..
T Consensus 398 ~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 398 PWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred ccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 1 36665 3 5788999999999999999887777777777777766666666654443
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.3e-08 Score=96.77 Aligned_cols=138 Identities=16% Similarity=0.094 Sum_probs=95.3
Q ss_pred CcEEEEEecCCCcCCCCC---C----CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEE
Q 045882 578 SRRAIFLDYDGTVVPHHA---L----IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYL 650 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~---~----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i 650 (832)
..|+++||+||||++-.- . .+..+..-...++.| ++.|..++|+|+++...+...+..++-.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~lgi~---------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEELKIK---------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHHCCCc----------
Confidence 379999999999997210 0 123455666788888 6789999999999888888777654200
Q ss_pred EeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEE
Q 045882 651 RWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVV 730 (832)
Q Consensus 651 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v 730 (832)
.| +. +
T Consensus 75 ------~~---f~----------------------~-------------------------------------------- 79 (169)
T TIGR02726 75 ------RF---HE----------------------G-------------------------------------------- 79 (169)
T ss_pred ------EE---Ee----------------------c--------------------------------------------
Confidence 00 00 0
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--ccc
Q 045882 731 KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KPS 808 (832)
Q Consensus 731 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~s 808 (832)
+ -.|-..++.+++++ |++++++++|||+.||++|++.++.+ |++..+. .+.
T Consensus 80 --------~----kpkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~~------------~am~nA~~~lk~ 132 (169)
T TIGR02726 80 --------I----KKKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGLA------------VAVGDAVADVKE 132 (169)
T ss_pred --------C----CCCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCCe------------EECcCchHHHHH
Confidence 0 14556788888888 99999999999999999999999864 4444443 267
Q ss_pred ccceEeCC--hhH-HHHHHHHhh
Q 045882 809 KARYYLDD--EED-VLALLKGLA 828 (832)
Q Consensus 809 ~A~y~l~~--~~e-V~~~L~~l~ 828 (832)
.|+|++.. .++ |..+++.+.
T Consensus 133 ~A~~I~~~~~~~g~v~e~~e~il 155 (169)
T TIGR02726 133 AAAYVTTARGGHGAVREVAELIL 155 (169)
T ss_pred hCCEEcCCCCCCCHHHHHHHHHH
Confidence 88998742 333 455555444
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.8e-07 Score=98.70 Aligned_cols=252 Identities=12% Similarity=0.033 Sum_probs=140.8
Q ss_pred HHHHhCCCCCEEEEeCccccc--HHH-HHHh-hcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhH
Q 045882 191 IMEVINPEEDYVWIHDYHLMV--LPT-FLRR-RFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYA 266 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~l--lp~-~lr~-~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~ 266 (832)
++..++++ |+|++|..-+.. ++. ++++ +..++|+++++|--+|..-.. .-.......+.+-.||.|..++....
T Consensus 58 ~~~~~~~~-Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~-~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPG-DIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS-NYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCC-CEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc-cchhhHHHHHHHHhCCEEEECCHHHH
Confidence 44556774 999999753321 222 2222 112699999999766632110 00112233455667899999888766
Q ss_pred HHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecccccc
Q 045882 267 RHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIF 346 (832)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~ 346 (832)
+.+.+ .|+. ..++.+.|+..+..... + +....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~-----~---------~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE-----L---------VKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc-----c---------cccccCCceEEEecChhhc
Confidence 55532 1221 11222333332221000 0 0112345689999999943
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
.++ .+..|+++ |+++|.+ ++.. . ....|.| .+.++.+|+..
T Consensus 182 ~~l----------~~~~~~~~----l~i~G~g-----~~~~-----------~--------~~~~V~f-~G~~~~eel~~ 222 (333)
T PRK09814 182 PFL----------KNWSQGIK----LTVFGPN-----PEDL-----------E--------NSANISY-KGWFDPEELPN 222 (333)
T ss_pred hHH----------HhcCCCCe----EEEECCC-----cccc-----------c--------cCCCeEE-ecCCCHHHHHH
Confidence 321 11345543 7777743 2211 0 0112544 56899999999
Q ss_pred HHHhcCcceecccc-----------cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---Cce
Q 045882 427 YYALAECCIVNAVR-----------DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAI 492 (832)
Q Consensus 427 ly~~ADv~vvtS~~-----------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~ 492 (832)
+|+. |+.+++.-. -.++--..|||||+ -|+|++..++.++.+. .|+
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-------------------~PVI~~~~~~~~~~V~~~~~G~ 282 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-------------------LPVIVWSKAAIADFIVENGLGF 282 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-------------------CCEEECCCccHHHHHHhCCceE
Confidence 9988 666654321 12333467789994 4699999999888882 388
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 493 RVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
+|+ +.++++++|... ++++++++.++.++...........+.-+.
T Consensus 283 ~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~~~~g~~~~~~~~ 327 (333)
T PRK09814 283 VVD--SLEELPEIIDNI---TEEEYQEMVENVKKISKLLRNGYFTKKALV 327 (333)
T ss_pred EeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 887 688899998873 456655555555555444333333443333
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.6e-06 Score=101.11 Aligned_cols=237 Identities=15% Similarity=0.073 Sum_probs=155.3
Q ss_pred CCCEEE--EeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCc--hHHHHHHHHhCCEEeecChhhHHHHHHHH
Q 045882 198 EEDYVW--IHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPV--RNEILKALLNADLIGFHTFDYARHFLSCC 273 (832)
Q Consensus 198 ~~d~vw--vhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~--r~~il~~ll~~dligf~t~~~~~~Fl~~~ 273 (832)
++|++. ++.-|... +....|..++.+..|+ -+. |. -+..+..+-.+|.+...|.+-.+......
T Consensus 224 ~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~~~ 291 (519)
T TIGR03713 224 DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYESLSRADLIIVDREDIERLLEENY 291 (519)
T ss_pred CCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhChhhcCeEEEcCHHHHHHHHHHh
Confidence 358777 77777766 4444454445556665 111 22 24566667778877766654443332111
Q ss_pred HHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHH
Q 045882 274 SRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKL 353 (832)
Q Consensus 274 ~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l 353 (832)
.. .. ....|..+|++.= +.. + ...++..++.|.+++||+ +.|-+...|
T Consensus 292 ~~----------------~~-~~~~v~~Ip~~~~--~~~-----~-------~~s~r~~~~~I~v~idrL-~ek~~~~~I 339 (519)
T TIGR03713 292 RE----------------NY-VEFDISRITPFDT--RLR-----L-------GQSQQLYETEIGFWIDGL-SDEELQQIL 339 (519)
T ss_pred hh----------------cc-cCCcceeeCccce--EEe-----c-------ChhhcccceEEEEEcCCC-ChHHHHHHH
Confidence 00 00 1123334565533 111 0 112333567788888899 999999999
Q ss_pred HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCc---------------------c-c
Q 045882 354 LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGY---------------------E-P 411 (832)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~---------------------~-p 411 (832)
+|+.++++++|+.. |...|... . .++.+.++++++++|..++.... . .
T Consensus 340 ~av~~~~~~~p~~~----L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (519)
T TIGR03713 340 QQLLQYILKNPDYE----LKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKE 409 (519)
T ss_pred HHHHHHHhhCCCeE----EEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhccccc
Confidence 99999999999977 77776331 1 23456777777777776432110 0 2
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--- 488 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--- 488 (832)
.+.+.+..+..++.+.|.-|.++|.+|..|||+ +.+|||+.|. |.| .-|.++.+
T Consensus 410 ~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi-------------------PqI---nyg~~~~V~d~ 466 (519)
T TIGR03713 410 RIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI-------------------PQI---NKVETDYVEHN 466 (519)
T ss_pred EEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC-------------------Cee---ecCCceeeEcC
Confidence 455666777779999999999999999999999 9999999733 344 55667777
Q ss_pred CCceEeCCCCHHHHHHHHHHHhcCC
Q 045882 489 SGAIRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 489 ~~a~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.+|.+| .|+.++++||...|+.+
T Consensus 467 ~NG~li--~d~~~l~~al~~~L~~~ 489 (519)
T TIGR03713 467 KNGYII--DDISELLKALDYYLDNL 489 (519)
T ss_pred CCcEEe--CCHHHHHHHHHHHHhCH
Confidence 369999 79999999999999854
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.2e-06 Score=100.92 Aligned_cols=181 Identities=10% Similarity=0.077 Sum_probs=114.1
Q ss_pred EEEEEeccccccCCHHHHHHHHHHHHH--hCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 335 KVIVGVDDMDIFKGISLKLLAMEQLLK--VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 335 ~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
.+|.++.|+..-||..+++..+++|++ .+|+ ..+.+|..|.+.-.+.. -.++.+++.+++++ -+|. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC--C--cE
Confidence 379999999999999999999999865 3444 35777777754322211 12344444444431 0222 1 47
Q ss_pred EEecCCCCHHHHHHHHHhcCcceeccc--ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC--
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAV--RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-- 488 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-- 488 (832)
+|+.+ .+..--..+++.|||++.||. .|.-|+.-+-|+. .|.|-+|-.=|.-.+-
T Consensus 550 vfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~--------------------NG~LnlSvlDGww~E~~~ 608 (778)
T cd04299 550 VFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL--------------------NGGLNLSVLDGWWDEGYD 608 (778)
T ss_pred EEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH--------------------cCCeeeecccCccccccC
Confidence 77664 555555589999999999998 7877777666666 3678888887766655
Q ss_pred -CCceEeCC------------CCHHHHHHHHHHHhc----------CCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 489 -SGAIRVNP------------WDIDAVADALHDAIT----------MSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 489 -~~a~~VnP------------~d~~~~A~ai~~aL~----------m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
.+|+.+.+ .|.+++-+.|.+++- .|..-.+.+.+.+....-.+++.+.++.|++.+-
T Consensus 609 g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 609 GENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 24888877 455556666654443 1222222222333444445777777777777665
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.7e-07 Score=90.79 Aligned_cols=70 Identities=11% Similarity=0.137 Sum_probs=55.0
Q ss_pred EEEEecCCCcCCCCC--------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHH---HHhcC-------CCCceE
Q 045882 581 AIFLDYDGTVVPHHA--------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLG---EWLAP-------CENLGI 642 (832)
Q Consensus 581 lI~lD~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~-------l~~l~l 642 (832)
++++|+||||+.... ....+++.+.++++++ +++|+.|+++|||+..... +|+.. +|..++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 589999999998320 0157899999999999 6889999999999988774 77765 333467
Q ss_pred EEeCCEEEE
Q 045882 643 AAEHGYYLR 651 (832)
Q Consensus 643 iaenGa~i~ 651 (832)
++.||+.+.
T Consensus 80 i~~~g~~~~ 88 (157)
T smart00775 80 LLSPDRLFA 88 (157)
T ss_pred EEcCCcchh
Confidence 888887764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.36 E-value=7.2e-07 Score=84.71 Aligned_cols=56 Identities=25% Similarity=0.301 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEeC
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYLD 815 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~ 815 (832)
+|-.+.+.|++.+ ++.++++.++|||.||+++|+.+|.+ |+++-+.. ...|.|++.
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls------------~a~~dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLS------------VAVADAHPLLKQRADYVTS 140 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCc------------ccccccCHHHHHhhHhhhh
Confidence 5888899999999 99999999999999999999999865 45554443 577888884
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.1e-05 Score=92.67 Aligned_cols=102 Identities=10% Similarity=0.102 Sum_probs=64.1
Q ss_pred HHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC--------CCceE
Q 045882 422 HEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--------SGAIR 493 (832)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--------~~a~~ 493 (832)
-++..+.+.+|++|+||.+|..|.+|+|++|. +.|-|.|..+|....+ ..|+.
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-------------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~ 521 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-------------------GVPSITTNLSGFGCWMQEHIEDPEEYGVY 521 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-------------------T--EEEETTBHHHHHHHTTS-HHGGGTEE
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhc-------------------CCceeeccchhHHHHHHHhhccCcCCcEE
Confidence 36778899999999999999999999999998 4578999999976433 12443
Q ss_pred -eCCC--CH----HHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 494 -VNPW--DI----DAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 494 -VnP~--d~----~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
|+-. |. +++|+.|.....|+..+|.....+..+.-..-++.+....|.+
T Consensus 522 VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 522 VVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp EE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4322 23 5677777777788888776655555444444555554444433
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.8e-06 Score=85.82 Aligned_cols=62 Identities=26% Similarity=0.371 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeCCh--hH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLDDE--ED 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~~~--~e 819 (832)
.|...++.+++.+ +++++++++|||+.+|+++.+.+|.. +.++.. +..|+|++.+. .+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~~--------------i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGLG--------------IAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCCe--------------EEeCCCHHHHHhchhccCCCCHHH
Confidence 5889999999988 89999999999999999999999863 334432 46789998644 55
Q ss_pred HHHH
Q 045882 820 VLAL 823 (832)
Q Consensus 820 V~~~ 823 (832)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5544
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.5e-05 Score=85.03 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=41.1
Q ss_pred EEEEEecCCCcCCCCCCCC---CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHH
Q 045882 580 RAIFLDYDGTVVPHHALIK---KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGE 632 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~---~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 632 (832)
|+|+||+||||+. .+. .+.+.+.++|++| ++.|..++++|||+......
T Consensus 2 k~i~~D~DGtl~~---~~~~~~~~~~~a~~al~~l-~~~G~~~~~~Tn~~~~~~~~ 53 (257)
T TIGR01458 2 KGVLLDISGVLYI---SDAKSGVAVPGSQEAVKRL-RGASVKVRFVTNTTKESKQD 53 (257)
T ss_pred CEEEEeCCCeEEe---CCCcccCcCCCHHHHHHHH-HHCCCeEEEEECCCCCCHHH
Confidence 6899999999998 333 3778999999999 68899999999988776433
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.30 E-value=6.4e-06 Score=87.53 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=52.1
Q ss_pred EEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcC---CChhhHHHHhcCCC----CceEEEeCCEEE
Q 045882 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSG---RGKVSLGEWLAPCE----NLGIAAEHGYYL 650 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~----~l~liaenGa~i 650 (832)
|+|++|+||||+. .+..+ +.+.++|++| ++.|+.|+++|| |+...+.+.+..++ ...+++.+|+..
T Consensus 2 ~~~~~D~DGtl~~---~~~~i-~~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~ 74 (249)
T TIGR01457 2 KGYLIDLDGTMYK---GKERI-PEAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATA 74 (249)
T ss_pred CEEEEeCCCceEc---CCeeC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHH
Confidence 6899999999998 44444 4789999999 688999999995 88998888887653 233777777643
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.1e-06 Score=85.88 Aligned_cols=45 Identities=18% Similarity=0.198 Sum_probs=39.7
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
..-.+-.|..+++.+++.+ |++++.++++|||.||.+||+.+++.
T Consensus 138 ~~~~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 138 PICDGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred eecCcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 3344557999999999998 99999999999999999999999963
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.00042 Score=76.78 Aligned_cols=300 Identities=20% Similarity=0.263 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcc----cccHHHH--HHhhcCCCeEEEEecCC---------CCChhhhhcCCch
Q 045882 181 VSANKVFADKIMEVINPEEDYVWIHDYH----LMVLPTF--LRRRFHRVKLGFFLHSP---------FPSSEIYRTLPVR 245 (832)
Q Consensus 181 ~~vN~~fa~~v~~~~~~~~d~vwvhDyh----l~llp~~--lr~~~~~~~ig~flH~P---------fP~~e~~r~lp~r 245 (832)
.+.+++|+ .......|++..||+|-=- ..++|-. ||+++|+.++..+.-+| |+..-..+-+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 45677776 1123445667899998554 3445544 89999999998887665 2222222334532
Q ss_pred H-HHHHHHH---hCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeE---------------------EEEE
Q 045882 246 N-EILKALL---NADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRT---------------------IYVK 300 (832)
Q Consensus 246 ~-~il~~ll---~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~---------------------~~i~ 300 (832)
. -.++..| ..|+..|.--+.=-|++..|.+. |+. .+-.++|- +..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 2 1223222 34555555444444555444321 111 01111110 0011
Q ss_pred EeecCCCchHHHhh---------------cCCCChHHHHHHHHHHcCC-CEEEEEeccccccCCHHHHHHHHHHHHHhCC
Q 045882 301 ILHVGIHMGRLESA---------------LNHPSSSIKVKEIREQFKG-KKVIVGVDDMDIFKGISLKLLAMEQLLKVHP 364 (832)
Q Consensus 301 i~P~GId~~~~~~~---------------~~~~~~~~~~~~l~~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P 364 (832)
+.-.-+|-++|.+. ...|........+|.++++ +++++..+- ...--...+.|+..|++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCC
Confidence 11112222233221 1223445667788888877 899999887 22333347889999999999
Q ss_pred CccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCC-------CcccEEEecCCCCHHHHHHHHHhcCcceec
Q 045882 365 ELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVP-------GYEPVILIDRPVPLHEKTAYYALAECCIVN 437 (832)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~-------~~~pv~~~~~~v~~~el~aly~~ADv~vvt 437 (832)
+.. ||.| | +.|+ =-..+++++++.|-+++.- ..++|++.+. .-|+..||++||+++|-
T Consensus 260 ~~l----lIlV--P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dt---mGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LILV--P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDT---MGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EEEe--c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEec---HhHHHHHHhhccEEEEC
Confidence 864 4433 2 3343 3457888888888777531 2235655443 77999999999998775
Q ss_pred cc---ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccC----ccccccC--C-CceEeCCCCHHHHHHHHH
Q 045882 438 AV---RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF----IGCSPSL--S-GAIRVNPWDIDAVADALH 507 (832)
Q Consensus 438 S~---~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~s~~l--~-~a~~VnP~d~~~~A~ai~ 507 (832)
-. .-|-| ++|+.+++. |+|.-.+ .-+.+.| . +++.|+. .+.+++++.
T Consensus 325 GSlv~~GGHN--~LEpa~~~~-------------------pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~ 381 (419)
T COG1519 325 GSLVPIGGHN--PLEPAAFGT-------------------PVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVE 381 (419)
T ss_pred CcccCCCCCC--hhhHHHcCC-------------------CEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHH
Confidence 43 34555 569999843 4554433 3334444 2 3666764 777887777
Q ss_pred HHhcCCHHHHHHHHHHHHhhhhcC
Q 045882 508 DAITMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~~v~~~ 531 (832)
..++. +++|+++.++....+.++
T Consensus 382 ~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 382 LLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HhcCC-HHHHHHHHHHHHHHHHHh
Confidence 77764 777777777777777665
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.9e-06 Score=83.80 Aligned_cols=41 Identities=27% Similarity=0.390 Sum_probs=36.8
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHc
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI 783 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a 783 (832)
.+.+.+|+.+++.+++.+ |++++.++++||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366889999999999887 88999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.8e-05 Score=81.46 Aligned_cols=54 Identities=9% Similarity=0.052 Sum_probs=45.7
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+|+++||+||||+. .+ .+.+.+.++|++| ++.|..++++|+|+........+.+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 47899999999998 33 6788999999999 6889999999999998776665554
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00021 Score=80.96 Aligned_cols=134 Identities=16% Similarity=0.123 Sum_probs=82.9
Q ss_pred CCEEE--EEeccccc-cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCc
Q 045882 333 GKKVI--VGVDDMDI-FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGY 409 (832)
Q Consensus 333 ~~~vi--l~VdRld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~ 409 (832)
++++| ++.+|..+ .|++..+++|++.+.+++|+++ ++.++.+. ...+ .++++.++. +. +
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~~----~~~~~~~~~----~~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRRL----QFEQIKAEY----GP-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhHH----HHHHHHHHh----CC-C-
Confidence 45544 34569887 7999999999999999999876 54443221 1111 222222222 21 1
Q ss_pred ccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEec----------
Q 045882 410 EPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS---------- 479 (832)
Q Consensus 410 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~S---------- 479 (832)
..+.++.+ +...+|++||++|.+| |.+.+|+++|+.| +|++
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P-------------------~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKTP-------------------MVVGYRMKPLTFLI 302 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCC-------------------EEEEEcCCHHHHHH
Confidence 13444433 3457999999999999 5666799999764 3333
Q ss_pred -------cCccccccCCC-c----eEeCCCCHHHHHHHHHHHhcCC
Q 045882 480 -------EFIGCSPSLSG-A----IRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 480 -------e~~G~s~~l~~-a----~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.+.+.+..+.+ + ++-.-.+++.+++++.+.|+.+
T Consensus 303 ~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 303 ARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 13333333422 1 2223346789999999999865
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=98.07 E-value=4.4e-05 Score=82.53 Aligned_cols=51 Identities=16% Similarity=0.215 Sum_probs=40.1
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHh
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWL 634 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 634 (832)
.++|+||+||||+. .. .+-+.+.++|++| +++|..++++|+|+.......+
T Consensus 2 ~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~ 52 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GE-RVVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYA 52 (279)
T ss_pred ccEEEEeCCCceEc---CC-eeCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHH
Confidence 47899999999998 33 3445689999999 6889999999998765444433
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.05 E-value=6.1e-05 Score=76.79 Aligned_cols=38 Identities=26% Similarity=0.367 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+|+.+++.+++.+ |+++++++++||+.+|++|++.+|.
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 5999999999988 8999999999999999999999985
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.01 E-value=7.9e-06 Score=76.84 Aligned_cols=51 Identities=22% Similarity=0.206 Sum_probs=41.3
Q ss_pred EEEEEecCCCcCCCCC---CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHH
Q 045882 580 RAIFLDYDGTVVPHHA---LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLG 631 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~---~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 631 (832)
|+|++|+||||+.... ....+.++++++|++| +++|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 6999999999987321 1134779999999999 5789999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.00 E-value=7.8e-05 Score=77.65 Aligned_cols=66 Identities=17% Similarity=0.278 Sum_probs=48.1
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeC
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLD 815 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~ 815 (832)
.+.+|..+++.+++.+ |. +.+++|||+.||+.|.+.++.. +.++.|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 4456889999988876 54 6899999999999996665432 34444531 235889999
Q ss_pred ChhHHHHHH
Q 045882 816 DEEDVLALL 824 (832)
Q Consensus 816 ~~~eV~~~L 824 (832)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 998887764
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.5e-05 Score=84.54 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=58.5
Q ss_pred CcEEEEEecCCCcCCCCCCCCCC---CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC---ceEEEeCCEEEE
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKP---SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN---LGIAAEHGYYLR 651 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~---s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~---l~liaenGa~i~ 651 (832)
..++|+||+||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|++++..+...++.++- ...|..+|....
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 468999999999999 45444 69999999999 788999999999999988888887642 246777887765
Q ss_pred eC
Q 045882 652 WT 653 (832)
Q Consensus 652 ~~ 653 (832)
..
T Consensus 201 ~k 202 (301)
T TIGR01684 201 EY 202 (301)
T ss_pred CC
Confidence 43
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.96 E-value=8.5e-05 Score=81.61 Aligned_cols=54 Identities=19% Similarity=0.127 Sum_probs=43.7
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
+.++|+||+||||+. .+ .+-+.+.++|++| ++.|..++++|+|+.......+..
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~ 80 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKK 80 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHH
Confidence 468999999999998 34 4557889999999 688999999999996665555533
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.3e-05 Score=68.56 Aligned_cols=87 Identities=15% Similarity=0.219 Sum_probs=69.2
Q ss_pred cceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC-C--ceEeCCCCHHHHHHHHHHH
Q 045882 433 CCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-G--AIRVNPWDIDAVADALHDA 509 (832)
Q Consensus 433 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-~--a~~VnP~d~~~~A~ai~~a 509 (832)
+++.|+..+|+++..+|+||| ++++|.+...+..+.+. + ++.++ |++++++++..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 467788889999999999999 45677776778887773 3 67777 999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHHH
Q 045882 510 ITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSFM 541 (832)
Q Consensus 510 L~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l 541 (832)
++ .+++++...++.+++|. .|+...-++.|+
T Consensus 60 l~-~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LE-NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99 55677777777888887 688777777665
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00022 Score=76.84 Aligned_cols=71 Identities=24% Similarity=0.205 Sum_probs=56.6
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--c----ccccceEe
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--K----PSKARYYL 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~----~s~A~y~l 814 (832)
+.+-.|...++.+++.+ |+.++.+++|||+.+|+.+.+.+|.. +++|..|. . ...|.|.+
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 44556777899999998 99999999999999999999999863 25666663 1 24688999
Q ss_pred CChhHHHHHHH
Q 045882 815 DDEEDVLALLK 825 (832)
Q Consensus 815 ~~~~eV~~~L~ 825 (832)
++..++..++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999887655
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00029 Score=73.28 Aligned_cols=66 Identities=23% Similarity=0.260 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC------cccccceEeCC
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ------KPSKARYYLDD 816 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~------~~s~A~y~l~~ 816 (832)
+..|..+++.+ +..++.+++|||+.||+.|.+.++.. |+ -+. ....+.+.+++
T Consensus 146 ~~~K~~~l~~~-------~~~~~~~i~iGDs~~Di~aa~~Ag~~------------~a--~~~l~~~~~~~~~~~~~~~~ 204 (219)
T PRK09552 146 GCCKPSLIRKL-------SDTNDFHIVIGDSITDLEAAKQADKV------------FA--RDFLITKCEELGIPYTPFET 204 (219)
T ss_pred CCchHHHHHHh-------ccCCCCEEEEeCCHHHHHHHHHCCcc------------ee--HHHHHHHHHHcCCCccccCC
Confidence 34687766554 66778999999999999999998752 22 121 12335556788
Q ss_pred hhHHHHHHHHhhh
Q 045882 817 EEDVLALLKGLAA 829 (832)
Q Consensus 817 ~~eV~~~L~~l~~ 829 (832)
-.+|...|+.+-+
T Consensus 205 f~ei~~~l~~~~~ 217 (219)
T PRK09552 205 FHDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHHhc
Confidence 9999998887754
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00056 Score=73.69 Aligned_cols=70 Identities=21% Similarity=0.320 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChh
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEE 818 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~ 818 (832)
.|..++..+++++ ++.++++++|||+.+|+.+-+.+|.. +++|.-|.. ...|.|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4678888899888 89999999999999999999999863 356666632 346899999999
Q ss_pred HHHHHHHHhh
Q 045882 819 DVLALLKGLA 828 (832)
Q Consensus 819 eV~~~L~~l~ 828 (832)
++..++.+|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999888775
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00022 Score=81.57 Aligned_cols=132 Identities=9% Similarity=0.136 Sum_probs=95.6
Q ss_pred cCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 331 FKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 331 ~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
+.++.++++ + ...|+|++.+.++.|++. |=+ |.++ ++..++.++ .+ | .
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~~----y-----~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-DK----Y-----D 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-Hh----c-----C
Confidence 345556655 1 899999999999999987 554 5443 112334343 22 2 2
Q ss_pred cEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCc-cccccCC
Q 045882 411 PVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFI-GCSPSLS 489 (832)
Q Consensus 411 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~s~~l~ 489 (832)
.++.+.+ +....+..+|..||+++.+|..||++++..||+..+. |++.=+.+ |-.+.+.
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~-------------------pI~afd~t~~~~~~i~ 388 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNL-------------------LILGFEETAHNRDFIA 388 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCC-------------------cEEEEecccCCccccc
Confidence 3666554 4456788999999999999999999999999999633 34443333 4444556
Q ss_pred CceEeCCCCHHHHHHHHHHHhcCCH
Q 045882 490 GAIRVNPWDIDAVADALHDAITMSD 514 (832)
Q Consensus 490 ~a~~VnP~d~~~~A~ai~~aL~m~~ 514 (832)
+|.++++.|+++++++|.++|+.+.
T Consensus 389 ~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 389 SENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred CCceecCCCHHHHHHHHHHHhcCHH
Confidence 6889999999999999999998764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00025 Score=71.00 Aligned_cols=49 Identities=22% Similarity=0.167 Sum_probs=38.5
Q ss_pred cCcEEEEEecCCCcCCCCC----CCCCCCHHHHHHHHHhhccCCCeEEEEcCCC
Q 045882 577 TSRRAIFLDYDGTVVPHHA----LIKKPSRDVIYVLRELCGDSNNTTFIVSGRG 626 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~----~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 626 (832)
+..|+|++|.||||..+.. ..-.+-+.+.++|++| ++.|+.++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKL-KANHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHH-HHCCCEEEEEECCc
Confidence 4679999999999977533 1223457889999999 67899999999864
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00036 Score=73.15 Aligned_cols=66 Identities=17% Similarity=0.125 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-------ccccceEeCChh
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-------PSKARYYLDDEE 818 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-------~s~A~y~l~~~~ 818 (832)
+-..+..+++.+ |++++++++|||+.+|+.+-+.+|.. +++|+-|.. ...|.|.+++..
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 446678888888 99999999999999999999999863 355655532 124889999999
Q ss_pred HHHHHHH
Q 045882 819 DVLALLK 825 (832)
Q Consensus 819 eV~~~L~ 825 (832)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9987764
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00057 Score=68.83 Aligned_cols=66 Identities=17% Similarity=0.074 Sum_probs=49.4
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----cccc--ceEeCChhH
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKA--RYYLDDEED 819 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A--~y~l~~~~e 819 (832)
-.....+++.+ |.+++++++|||+.+|+.+-+.+|.. ++.+.-|.. ...| .+++++..+
T Consensus 106 p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~e 171 (181)
T PRK08942 106 PGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLAD 171 (181)
T ss_pred HHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHHH
Confidence 34566777777 99999999999999999999999853 245554532 2335 788888888
Q ss_pred HHHHHHH
Q 045882 820 VLALLKG 826 (832)
Q Consensus 820 V~~~L~~ 826 (832)
+.++|..
T Consensus 172 l~~~l~~ 178 (181)
T PRK08942 172 LPQALKK 178 (181)
T ss_pred HHHHHHh
Confidence 8887753
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00029 Score=72.92 Aligned_cols=70 Identities=23% Similarity=0.238 Sum_probs=55.6
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCC
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDD 816 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~ 816 (832)
.-.|...+.++++++ |.+++.+++|||+.+|+.+-+.+|.. +++|.-|.. ...|.|.+++
T Consensus 137 ~Kp~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~ 202 (214)
T PRK13288 137 AKPDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDK 202 (214)
T ss_pred CCCCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECC
Confidence 445678889999998 89999999999999999999999863 245555532 2358899999
Q ss_pred hhHHHHHHHH
Q 045882 817 EEDVLALLKG 826 (832)
Q Consensus 817 ~~eV~~~L~~ 826 (832)
..++.+++..
T Consensus 203 ~~~l~~~i~~ 212 (214)
T PRK13288 203 MSDLLAIVGD 212 (214)
T ss_pred HHHHHHHHhh
Confidence 9999887754
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0011 Score=68.96 Aligned_cols=67 Identities=22% Similarity=0.216 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChhH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEED 819 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~e 819 (832)
|..+++.+++.+ +++++.+++|||+.+|+.+.+.+|.. .+.|..|.. ...|.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 567889999998 99999999999999999999999863 245555532 2357899999999
Q ss_pred HHHHHHH
Q 045882 820 VLALLKG 826 (832)
Q Consensus 820 V~~~L~~ 826 (832)
+..+|.+
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9888753
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00014 Score=77.42 Aligned_cols=72 Identities=17% Similarity=0.034 Sum_probs=56.6
Q ss_pred CcEEEEEecCCCcCCCCCCCCCC---CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC---ceEEEeCCEEEE
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKP---SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN---LGIAAEHGYYLR 651 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~---s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~---l~liaenGa~i~ 651 (832)
..++|+||+||||++ ..+.+ ++.+.++|.+| ++.|..++|+|+.++..+...++.++- ...|..+|....
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 468999999999999 55555 79999999999 688999999998888888888876542 235666666554
Q ss_pred eC
Q 045882 652 WT 653 (832)
Q Consensus 652 ~~ 653 (832)
..
T Consensus 203 k~ 204 (303)
T PHA03398 203 EY 204 (303)
T ss_pred cc
Confidence 43
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00053 Score=71.44 Aligned_cols=65 Identities=25% Similarity=0.237 Sum_probs=51.8
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChhHHH
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEEDVL 821 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~eV~ 821 (832)
..+..+++.+ |..++.++++||+.+|+.|-+.+|.. .++|+.|.. ...|.+++++..++.
T Consensus 149 ~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~~-----------~v~v~~g~~~~~~l~~~~~d~vi~~~~el~ 214 (220)
T COG0546 149 EPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGVP-----------AVGVTWGYNSREELAQAGADVVIDSLAELL 214 (220)
T ss_pred HHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCCC-----------EEEEECCCCCCcchhhcCCCEEECCHHHHH
Confidence 4566677777 88878999999999999999999842 367888742 356899999999998
Q ss_pred HHHHH
Q 045882 822 ALLKG 826 (832)
Q Consensus 822 ~~L~~ 826 (832)
..|..
T Consensus 215 ~~l~~ 219 (220)
T COG0546 215 ALLAE 219 (220)
T ss_pred HHHhc
Confidence 87753
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0022 Score=66.49 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC------cccccceEeCC
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ------KPSKARYYLDD 816 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~------~~s~A~y~l~~ 816 (832)
|..|..+++.+. ..++.++++||+.||+.|.+.++.. ++-+. ....+-+..++
T Consensus 142 g~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~--------------~ar~~l~~~~~~~~~~~~~~~~ 200 (214)
T TIGR03333 142 GCCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLC--------------FARDYLLNECEELGLNHAPFQD 200 (214)
T ss_pred CCCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCee--------------EehHHHHHHHHHcCCCccCcCC
Confidence 457998888763 3467899999999999999998753 22221 12223334578
Q ss_pred hhHHHHHHHHhh
Q 045882 817 EEDVLALLKGLA 828 (832)
Q Consensus 817 ~~eV~~~L~~l~ 828 (832)
-.+|.+.|++.-
T Consensus 201 f~di~~~l~~~~ 212 (214)
T TIGR03333 201 FYDVRKELENVK 212 (214)
T ss_pred HHHHHHHHHHHh
Confidence 889988887653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0019 Score=76.89 Aligned_cols=64 Identities=13% Similarity=0.171 Sum_probs=51.3
Q ss_pred HhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCC-CeEEEEcCCChhhHHHHhcCC
Q 045882 573 AYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSN-NTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 573 ~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g-~~V~I~SGR~~~~l~~~~~~l 637 (832)
.+.+...+.+++..||+++..-.....+-+.+.++|++| ++.| +.++|+||.+...+....+++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 344556788899999988863223456789999999999 6788 999999999999998888765
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.005 Score=64.06 Aligned_cols=63 Identities=10% Similarity=-0.001 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccceEeCChhH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARYYLDDEED 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y~l~~~~e 819 (832)
.+....+.+++.+ |++++++++|||+.+|+++-+.+|.. ++.+.-+.. ...|.+++.+..+
T Consensus 149 p~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~d 214 (222)
T PRK10826 149 PHPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTE 214 (222)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHH
Confidence 4556888999998 99999999999999999999999863 133332321 1357777777777
Q ss_pred HH
Q 045882 820 VL 821 (832)
Q Consensus 820 V~ 821 (832)
+.
T Consensus 215 l~ 216 (222)
T PRK10826 215 LT 216 (222)
T ss_pred Hh
Confidence 53
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0022 Score=62.38 Aligned_cols=47 Identities=21% Similarity=0.253 Sum_probs=36.5
Q ss_pred EEEEEecCCCcCCCCCCC-------CCCCHHHHHHHHHhhccCCCeEEEEcCCCh
Q 045882 580 RAIFLDYDGTVVPHHALI-------KKPSRDVIYVLRELCGDSNNTTFIVSGRGK 627 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~-------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 627 (832)
++++||+||||....+.. -.+-+.+.++|+.| ++.|..++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~L-k~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTL-RAAGYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHH-HHCCCEEEEEeCCCc
Confidence 478999999999854311 13567888999999 688999999998753
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0033 Score=63.03 Aligned_cols=63 Identities=16% Similarity=0.040 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y~l~~~~eV 820 (832)
+-..+...++++ |++++++++|||+.+|+..-+.+|... +..|.-|.. ...|++++++..++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~~----------~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVKT----------NVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCcE----------EEEEecCCcccccccccCCEEeccHHHh
Confidence 345567777777 999999999999999999999998631 124444532 23488999888776
Q ss_pred H
Q 045882 821 L 821 (832)
Q Consensus 821 ~ 821 (832)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 4
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0032 Score=78.54 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=49.0
Q ss_pred HHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 572 DAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
..+.+...+.+++-.||+++..-.....+-+.+.++|++| ++.|+.++++||.+....+...+.+
T Consensus 623 ~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~~l 687 (834)
T PRK10671 623 TAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAKEA 687 (834)
T ss_pred HHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 3445556788888889987642113445667888999999 6889999999999999888877654
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00087 Score=63.60 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=42.8
Q ss_pred EEEEEecCCCcCCCCC--CCC-------CCCHHHHHHHHHhhccCCCeEEEEcCC-ChhhHHHHhc
Q 045882 580 RAIFLDYDGTVVPHHA--LIK-------KPSRDVIYVLRELCGDSNNTTFIVSGR-GKVSLGEWLA 635 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~--~~~-------~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~ 635 (832)
|+|++|+||||++... ... .+-+.+.+.|+.| +++|+.++|+|++ ........++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHHH
Confidence 6899999999998521 111 2467999999999 6789999999999 6666666664
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0035 Score=62.94 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=32.5
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+.+..|+..++.+++.. ++.++++||+.||+.+.+.++.
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCc
Confidence 356778988888886642 6889999999999999988864
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0046 Score=61.15 Aligned_cols=38 Identities=18% Similarity=0.097 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
|-..+..+++.+ +++++++++|||+.+|+.+-+.+|..
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 456677888887 89999999999999999999998863
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.005 Score=73.91 Aligned_cols=69 Identities=13% Similarity=0.133 Sum_probs=53.5
Q ss_pred HHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 569 RIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 569 ~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
...+.+.+...+.+++-+|++++..-.....+-+++.+++++| ++.|++++++||...........+++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~lG 484 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAEAG 484 (675)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 3344555666788888888887752223556778999999999 78899999999999999988887654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0037 Score=73.99 Aligned_cols=60 Identities=15% Similarity=0.188 Sum_probs=46.7
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCC-eEEEEcCCChhhHHHHhcCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNN-TTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~-~V~I~SGR~~~~l~~~~~~l 637 (832)
...+.++.-.||++...-.....+-+.+.++|++| ++.|+ +++++||.+........+.+
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHHc
Confidence 34466677778877652223456778999999999 68899 99999999999998888765
|
. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0055 Score=63.54 Aligned_cols=66 Identities=18% Similarity=0.141 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHhhhhCCCC-cceEEEEeCChhhHHHHHHcccccCCCCCCCCCcE-EEEEeCCc------ccccceEeCC
Q 045882 745 TKGLVAEKVLSTMISDGKL-PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEI-FACTVGQK------PSKARYYLDD 816 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~-~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~-f~v~vG~~------~s~A~y~l~~ 816 (832)
-+......+++++ |+. ++.+++|||+.+|+.+-+.+|.. + ++|.-|.. ...|.+++++
T Consensus 146 P~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~ 211 (220)
T TIGR03351 146 PAPDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDS 211 (220)
T ss_pred CCHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecC
Confidence 3567888888888 887 79999999999999999999864 2 34544431 2457788888
Q ss_pred hhHHHHHH
Q 045882 817 EEDVLALL 824 (832)
Q Consensus 817 ~~eV~~~L 824 (832)
..++..++
T Consensus 212 ~~~l~~~~ 219 (220)
T TIGR03351 212 VADLPALL 219 (220)
T ss_pred HHHHHHhh
Confidence 88776654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.00064 Score=64.60 Aligned_cols=57 Identities=21% Similarity=0.248 Sum_probs=44.1
Q ss_pred EEEEEecCCCcCCCCC-----CCCCCCHHHHHHHHHhhccCCCeEEEEcCCC--------hhhHHHHhcCC
Q 045882 580 RAIFLDYDGTVVPHHA-----LIKKPSRDVIYVLRELCGDSNNTTFIVSGRG--------KVSLGEWLAPC 637 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~-----~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~--------~~~l~~~~~~l 637 (832)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++ ...+..++..+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~ 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL 70 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCccccccHHHHHHHHHHHHHC
Confidence 6899999999995110 1235678999999999 68899999999998 66666666543
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.03 Score=62.73 Aligned_cols=70 Identities=11% Similarity=0.119 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeCChhHH-H
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLDDEEDV-L 821 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~~~~eV-~ 821 (832)
+.......++.+ |+.++++++|||+.+|+..-+.+|.. +++|+-+.. ...|.+++++.+++ .
T Consensus 274 ~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 274 DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 456777888888 99999999999999999999988863 244433321 23588999999997 5
Q ss_pred HHHHHhhh
Q 045882 822 ALLKGLAA 829 (832)
Q Consensus 822 ~~L~~l~~ 829 (832)
..|+.|.+
T Consensus 340 ~~l~~l~~ 347 (381)
T PLN02575 340 VDLKNLAD 347 (381)
T ss_pred HHHhhhhh
Confidence 66666654
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.02 Score=60.52 Aligned_cols=55 Identities=13% Similarity=0.167 Sum_probs=43.0
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHH--HHhcCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLG--EWLAPC 637 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~--~~~~~l 637 (832)
+.++++||+||||.. ...+-+.+.++|++| ++.|..++|+|..++.... +.+..+
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence 357999999999997 345678999999999 6789999999887665433 555544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0027 Score=66.74 Aligned_cols=70 Identities=20% Similarity=0.169 Sum_probs=50.3
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCC---CC-CCCCH---------------------------HHHHHHHHhhc
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA---LI-KKPSR---------------------------DVIYVLRELCG 613 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~---~~-~~~s~---------------------------~~~~~L~~L~~ 613 (832)
.++++|.+.....+.-.|+||+||||++..+ .. ..+++ ...++|+.+ +
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l-~ 127 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH-Q 127 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHH-H
Confidence 7899999888766666999999999998543 11 11122 267888888 6
Q ss_pred cCCCeEEEEcCC----ChhhHHHHhc
Q 045882 614 DSNNTTFIVSGR----GKVSLGEWLA 635 (832)
Q Consensus 614 d~g~~V~I~SGR----~~~~l~~~~~ 635 (832)
+.|.+++|+|+| ....+...++
T Consensus 128 ~~G~~i~iVTnr~~~k~~~~a~~ll~ 153 (237)
T TIGR01672 128 RRGDAIFFVTGRTPGKTDTVSKTLAK 153 (237)
T ss_pred HCCCEEEEEeCCCCCcCHHHHHHHHH
Confidence 789999999999 3334444444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0079 Score=63.86 Aligned_cols=70 Identities=19% Similarity=0.150 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccceEeCChhH-
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARYYLDDEED- 819 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y~l~~~~e- 819 (832)
+-......++++ |.+++++++|||+.+|+..=+.+|.. +++|.-|.. ...|.|++++..+
T Consensus 166 ~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 166 HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 446677888888 99999999999999999999998863 245554532 3468899998877
Q ss_pred -HHHHHHHhhh
Q 045882 820 -VLALLKGLAA 829 (832)
Q Consensus 820 -V~~~L~~l~~ 829 (832)
+...|..+.+
T Consensus 232 ~~~~~~~~~~~ 242 (248)
T PLN02770 232 KLWAALEELDQ 242 (248)
T ss_pred HHHHHHhhccc
Confidence 5555555443
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0099 Score=64.55 Aligned_cols=61 Identities=16% Similarity=0.044 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~eV 820 (832)
+-.....+++.+ |.+++.+++|||+.+|+.+-+.+|.. +++|.-|.. -..|.+++++..++
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhc
Confidence 356778888888 99999999999999999999999863 245544532 13588888887765
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.012 Score=64.86 Aligned_cols=58 Identities=10% Similarity=0.028 Sum_probs=45.0
Q ss_pred CcEEEEEecCCCcCCCCC-CC-------CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 578 SRRAIFLDYDGTVVPHHA-LI-------KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~-~~-------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
.+|+|++|+|+||..-.- .+ ..+-+.+.++|++| +++|+.++|+|..+...+...|..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHh
Confidence 469999999999997320 01 12347899999999 688999999999988888777753
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.054 Score=57.93 Aligned_cols=68 Identities=16% Similarity=0.188 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCChhHHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDEEDVL 821 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~eV~ 821 (832)
+-......++.+ |++++.+++|||+.+|+..-+.+|.. +++|. |.. -..|.+.+++..++.
T Consensus 167 ~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLS 231 (260)
T ss_pred CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHH
Confidence 355677788888 99999999999999999999998863 24554 432 245888999988865
Q ss_pred H-HHHHhh
Q 045882 822 A-LLKGLA 828 (832)
Q Consensus 822 ~-~L~~l~ 828 (832)
. .|..|+
T Consensus 232 ~~~~~~~~ 239 (260)
T PLN03243 232 VVDLKNLS 239 (260)
T ss_pred HHHHhhhh
Confidence 3 334443
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.01 Score=70.63 Aligned_cols=61 Identities=10% Similarity=0.158 Sum_probs=49.1
Q ss_pred ccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 576 RTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+...+.++++.||+++..-.....+-+.+.++|++| ++.|+.++++||.....++...+.+
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHc
Confidence 345688999999998763223456788999999999 6789999999999999888887754
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.015 Score=71.41 Aligned_cols=66 Identities=11% Similarity=0.108 Sum_probs=52.5
Q ss_pred HHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 572 DAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
+.+.....+.+++=+||+++..-....++-++..++|++| ++.|+.++++||.....+..+.+.++
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~lg 606 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGELG 606 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 4556667788888899988752223456778999999999 67899999999999999998887653
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.015 Score=67.53 Aligned_cols=36 Identities=11% Similarity=0.070 Sum_probs=28.9
Q ss_pred CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 601 SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 601 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
.+++.+.|+++ ++.|.+++|+|+.+...++...+.+
T Consensus 74 ~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~~l 109 (479)
T PRK08238 74 NEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAAHL 109 (479)
T ss_pred ChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 47788888888 6788999999998888887777654
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.046 Score=54.76 Aligned_cols=38 Identities=8% Similarity=0.116 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+-...+..++.+ +++++.+++|||+.+|+..-+.+|.
T Consensus 142 p~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 142 PDPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 4566778888888 9999999999999999999999886
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.022 Score=71.42 Aligned_cols=164 Identities=14% Similarity=0.181 Sum_probs=101.3
Q ss_pred HHhhccCcEEEEEecCC-----CcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeC
Q 045882 572 DAYKRTSRRAIFLDYDG-----TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEH 646 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DG-----TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaen 646 (832)
..|.+...|.+++=+++ |++..-....+|-+++.++|++| ++.|+.++++||............++ +...+
T Consensus 496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~~~G---i~~~~ 571 (884)
T TIGR01522 496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIARRLG---MPSKT 571 (884)
T ss_pred HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC---CCCCC
Confidence 34555567888887765 44432113556778999999999 78999999999999999998887653 22111
Q ss_pred CEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC
Q 045882 647 GYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE 726 (832)
Q Consensus 647 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~ 726 (832)
+..+ .. +.+.. . ...++ .+.+.+.
T Consensus 572 ~~~v------------~g------~~l~~-------------------------------~---~~~~l----~~~~~~~ 595 (884)
T TIGR01522 572 SQSV------------SG------EKLDA-------------------------------M---DDQQL----SQIVPKV 595 (884)
T ss_pred Ccee------------Eh------HHhHh-------------------------------C---CHHHH----HHHhhcC
Confidence 1100 00 00000 0 00122 2222211
Q ss_pred CEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC-
Q 045882 727 PVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ- 805 (832)
Q Consensus 727 ~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~- 805 (832)
.+--+...-.|...++.+.+. | ..|+++||+.||.++++.|+ +++++|.
T Consensus 596 ---------~Vfar~~P~~K~~iv~~lq~~----g---~~v~mvGDGvND~pAl~~Ad--------------VGia~g~~ 645 (884)
T TIGR01522 596 ---------AVFARASPEHKMKIVKALQKR----G---DVVAMTGDGVNDAPALKLAD--------------IGVAMGQT 645 (884)
T ss_pred ---------eEEEECCHHHHHHHHHHHHHC----C---CEEEEECCCcccHHHHHhCC--------------eeEecCCC
Confidence 111223334687777665432 3 67999999999999999997 5777874
Q ss_pred ----cccccceEe--CChhHHHHHHH
Q 045882 806 ----KPSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 806 ----~~s~A~y~l--~~~~eV~~~L~ 825 (832)
++..|++++ ++...+..++.
T Consensus 646 g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 646 GTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred cCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 246688988 56777766654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0045 Score=61.57 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=37.3
Q ss_pred CcEEEEEecCCCcCCCCCCCCC---------CCHHHHHHHHHhhccCCCeEEEEcCCCh
Q 045882 578 SRRAIFLDYDGTVVPHHALIKK---------PSRDVIYVLRELCGDSNNTTFIVSGRGK 627 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~---------~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 627 (832)
+.|++++|+||||+...+.... +-+.+.++|++| ++.|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCcc
Confidence 4689999999999974321111 236789999999 688999999997654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.006 Score=63.32 Aligned_cols=61 Identities=11% Similarity=-0.012 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~~~~eV 820 (832)
+.......++.+ |++|+++++|||+.+|+..=+.+|.. +++|+.|.. ...|.+++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 345666777777 99999999999999999988888752 234443321 24577888877664
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.29 Score=53.84 Aligned_cols=198 Identities=20% Similarity=0.208 Sum_probs=115.2
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC--------
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP-------- 636 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-------- 636 (832)
|++.+|..--+..+-+|+-||=|+||...+. .-.++..++.-|-+|- ..|+.|.|+|.=++....++.+.
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG~-sl~~d~pvi~~ii~LL-~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~ 210 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDGA-SLEPDNPVIPRIIKLL-RRGVKVGIVTAAGYPGAEKYEERLHGLLDAF 210 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCCC-CCCCCchHHHHHHHHH-hcCCeEEEEeCCCCCChHHHHHHHHHHHHHH
Confidence 7777777665556889999999999998432 2234666776666663 57999999999887765554332
Q ss_pred -----CC-----Cce-EEEeCCEEEEeCCC----------ccEEEcCcccchhHH-HHHHHHHH-------HHHhc--CC
Q 045882 637 -----CE-----NLG-IAAEHGYYLRWTKK----------SEWETSTVAADFEWK-RITEPVMK-------LYTEA--TD 685 (832)
Q Consensus 637 -----l~-----~l~-liaenGa~i~~~~~----------~~w~~~~~~~~~~w~-~~v~~i~~-------~~~e~--~~ 685 (832)
++ ++. +-+|.-+..+...+ ..|... .-..|. +.+..+++ ...++ .|
T Consensus 211 ~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~---~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp 287 (408)
T PF06437_consen 211 KDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP---EMKTWSEEDITELLDIAEAALRDCVKRLNLP 287 (408)
T ss_pred HhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc---cccCcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 11 122 33444555555432 234321 112342 23444443 33332 34
Q ss_pred ceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcC------CCEEEEEcC--eEEEEEeCCCCHHHHHHHHHHhh
Q 045882 686 GSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLAN------EPVVVKRGY--NIVEVKPQGVTKGLVAEKVLSTM 757 (832)
Q Consensus 686 gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~------~~~~v~~g~--~~vEV~p~gvnKG~al~~Ll~~l 757 (832)
..|-.|+-++...... .......+.+|+.-.+...+.. .|+....|. -+||| -||.-|++.+.+.+
T Consensus 288 -a~IiRK~RAVGivP~~-~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~ 361 (408)
T PF06437_consen 288 -ATIIRKERAVGIVPKP-GVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYF 361 (408)
T ss_pred -eeEEeecceeeEecCC-CCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHH
Confidence 5566777777654421 1112223444544444333322 345555553 45666 48999998887776
Q ss_pred hh-CCCCcceEEEEeCC
Q 045882 758 IS-DGKLPDFVLCVGDD 773 (832)
Q Consensus 758 ~~-~gi~~d~vl~~GDd 773 (832)
.. .+|.+.+++.+||-
T Consensus 362 ~~~~~i~~~~tLHVGDQ 378 (408)
T PF06437_consen 362 DPEGGIKPSETLHVGDQ 378 (408)
T ss_pred HhccCCCccceeeehhh
Confidence 21 37999999999994
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.072 Score=56.89 Aligned_cols=54 Identities=11% Similarity=0.206 Sum_probs=41.5
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCCh---hhHHHHhcC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGK---VSLGEWLAP 636 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~~~~~~ 636 (832)
+.+.++||+||||.. ...+=+...++|++| +++|.+++++|-.+. ..+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 346899999999997 555668999999999 788999999976554 434444443
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.036 Score=56.17 Aligned_cols=48 Identities=23% Similarity=0.429 Sum_probs=39.9
Q ss_pred eEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhH-HHHHH
Q 045882 735 NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDE-DMFES 782 (832)
Q Consensus 735 ~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~-~Mf~~ 782 (832)
+.....|++.-||..+..+.......|+..+.++++||+.||. +|++.
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~L 201 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRL 201 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhc
Confidence 4445579999999999999888777899999999999999997 44443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.038 Score=66.59 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=51.7
Q ss_pred HHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 571 VDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 571 ~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+.+.+...+.+++-.|++++.--.....+-+++.+++++| ++.|++++++||-.......+-.+++
T Consensus 417 ~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~elG 483 (679)
T PRK01122 417 VDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAEAG 483 (679)
T ss_pred HHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 34455556677777788888752223456778999999999 78899999999999999988887653
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.022 Score=55.48 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=57.3
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
++.+.+ ++...|-|++|+|.||++. .+...+|++++-+..+ ++.|+.++|+|--+...+..+...++
T Consensus 18 i~~~~L----~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 18 ITPDIL----KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred CCHHHH----HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 566655 4568899999999999997 4667889999999999 78999999999999999988887663
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.027 Score=57.63 Aligned_cols=39 Identities=13% Similarity=0.102 Sum_probs=32.8
Q ss_pred CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 599 KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 599 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+-+++.++|+.| ++.|+.++++||.+..........++
T Consensus 127 ~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~lg 165 (215)
T PF00702_consen 127 PLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQLG 165 (215)
T ss_dssp EBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhh-hccCcceeeeeccccccccccccccc
Confidence 3456889999999 67899999999999999988887653
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.002 Score=58.46 Aligned_cols=51 Identities=14% Similarity=0.249 Sum_probs=37.8
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChh---hHHHHhcCC
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKV---SLGEWLAPC 637 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~---~l~~~~~~l 637 (832)
|+||+||||.. ...+-|.+.++|++| ++.|..++++|-.+.. .+.+.+..+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L~~~ 54 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKLKKL 54 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHHHHT
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHHHhc
Confidence 68999999997 455667889999999 6889999999876644 444444443
|
... |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.057 Score=65.09 Aligned_cols=71 Identities=13% Similarity=0.178 Sum_probs=51.8
Q ss_pred HHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 567 VDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 567 ~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+...+.+.+...+.++.-.|++++.--.....|-+++.+++++| ++.|++++++||-........-++++
T Consensus 409 ~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 444445555555566655457777642213456788999999999 78899999999999999988887654
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.027 Score=58.23 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQA 786 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~ 786 (832)
+......+++.+ |++++.+++|||+. +|+.+-+.+|..
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE
Confidence 445778888888 99999999999997 999999999863
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.11 Score=66.04 Aligned_cols=41 Identities=12% Similarity=0.136 Sum_probs=35.4
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
..+|-+++.++|+++ ++.|+.|+++|||....+.....+++
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 345678999999999 78999999999999999998887653
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.078 Score=60.05 Aligned_cols=61 Identities=13% Similarity=0.025 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~eV 820 (832)
+......+++.+ |++++++++|||+.+|+..-+.+|.. +++|+-|.. ...|.+.+++..++
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHc
Confidence 456788888888 99999999999999999999999863 244443331 24577777777664
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.017 Score=58.70 Aligned_cols=158 Identities=22% Similarity=0.237 Sum_probs=98.0
Q ss_pred CHHHHHHHhhccCcEEEEEecCCCcCCCCC---CCC---------CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHH
Q 045882 566 SVDRIVDAYKRTSRRAIFLDYDGTVVPHHA---LIK---------KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEW 633 (832)
Q Consensus 566 ~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~---~~~---------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 633 (832)
..+.++..+++.+.|+|++|+|-||++..+ .+. .++++....+.+| ++.|+.|+|||=-+....
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~~--- 105 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKELI--- 105 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhhc---
Confidence 456788889999999999999999998211 122 2689999999998 688999999995544321
Q ss_pred hcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHH
Q 045882 634 LAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAK 713 (832)
Q Consensus 634 ~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~ 713 (832)
+. ..++.+ +.. .+.++..++.- ....-++. ++-|- |.+. +..
T Consensus 106 ----~~----~~~~~~------------Isg-----~~li~~~lk~s---~~~~~i~~-----~~~yy---p~~w--~~p 147 (219)
T PTZ00445 106 ----PS----ENRPRY------------ISG-----DRMVEAALKKS---KCDFKIKK-----VYAYY---PKFW--QEP 147 (219)
T ss_pred ----cc----cCCcce------------ech-----HHHHHHHHHhc---Cccceeee-----eeeeC---Cccc--CCh
Confidence 10 001111 111 23344444322 11111111 12111 2221 111
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 714 ELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 714 el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+.... .=-++|....|..=++++++.. |+.|++++.|=|+....+.-+.+|.
T Consensus 148 ~~y~~-----------------~gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 148 SDYRP-----------------LGLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhh-----------------hcccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 11111 1124577778888889999999 9999999999999999998888875
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.043 Score=58.19 Aligned_cols=85 Identities=25% Similarity=0.507 Sum_probs=57.6
Q ss_pred HHHHHHHHHhCC---CCCEEEEeCcccccHHHHHHhhcC------CCeEEEEecCC-C----CChhhhhc--CCch----
Q 045882 186 VFADKIMEVINP---EEDYVWIHDYHLMVLPTFLRRRFH------RVKLGFFLHSP-F----PSSEIYRT--LPVR---- 245 (832)
Q Consensus 186 ~fa~~v~~~~~~---~~d~vwvhDyhl~llp~~lr~~~~------~~~ig~flH~P-f----P~~e~~r~--lp~r---- 245 (832)
.|+.++++.++. .-|+|++||+|..++|.+||.... ++++.|++|-. | |. +.+.. +|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 455555554432 239999999999999999999864 69999999953 2 22 22211 2321
Q ss_pred ----------HHHHHHHHhCCEEeecChhhHHHHHH
Q 045882 246 ----------NEILKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 246 ----------~~il~~ll~~dligf~t~~~~~~Fl~ 271 (832)
.-+--|+..||.|-.=++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 23446799999999999999886653
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.073 Score=67.33 Aligned_cols=138 Identities=14% Similarity=0.170 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPV 676 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 676 (832)
..+|-+++.+++++| ++.|++++++||.........-.+++ +...++.. +...+ +..
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~~~G---I~~~~~~v------------i~G~~------~~~- 633 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIARNCG---ILTFGGLA------------MEGKE------FRR- 633 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcC---CCCCCceE------------eeHHH------hhh-
Confidence 446778999999999 78899999999999999988877653 22222110 00000 000
Q ss_pred HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHh
Q 045882 677 MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLST 756 (832)
Q Consensus 677 ~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 756 (832)
.. ..++ .+.+.+. .-+-.+.|. .|...++.+.+.
T Consensus 634 ------------------------------l~---~~el----~~~i~~~-------~Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 634 ------------------------------LV---YEEM----DPILPKL-------RVLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred ------------------------------CC---HHHH----HHHhccC-------eEEEECCHH--HHHHHHHHHHHC
Confidence 00 0122 2222221 112344454 698888887553
Q ss_pred hhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC-C----cccccceEeC--ChhHHHHHH
Q 045882 757 MISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG-Q----KPSKARYYLD--DEEDVLALL 824 (832)
Q Consensus 757 l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG-~----~~s~A~y~l~--~~~eV~~~L 824 (832)
| .-|.++||+.||.++++.|+ +++++| . ++..|++++- +-..+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~Ad--------------VGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLAD--------------VGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCC--------------cceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 36999999999999999997 577787 3 3567888874 455555555
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.019 Score=57.84 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=29.3
Q ss_pred HHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 602 RDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 602 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+++.+.|+.+ ++.|..|+|+||-....++.+...+
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~~~ 126 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAERL 126 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHHHT
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHHHc
Confidence 5677889888 6789999999999988888887644
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.092 Score=66.24 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
..+|-+++.++|++| ++.|++++++||............++
T Consensus 535 ~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~~g 575 (917)
T TIGR01116 535 LDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRRIG 575 (917)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHHcC
Confidence 456788999999999 78999999999999998888877653
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.086 Score=66.15 Aligned_cols=136 Identities=16% Similarity=0.191 Sum_probs=87.0
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPV 676 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 676 (832)
..+|-+++.+++++| ++.|+.|+++||-........-++++ +. ++ . .....+ +.
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~lG---I~--~~--------~----v~~G~e------l~-- 601 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHEVG---LD--AG--------E----VLIGSD------IE-- 601 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcC---CC--cc--------C----ceeHHH------HH--
Confidence 446778999999999 78899999999999999998887654 20 11 0 000000 00
Q ss_pred HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHh
Q 045882 677 MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLST 756 (832)
Q Consensus 677 ~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 756 (832)
. .+ .+++.+.+ .+.. -+-.+.|. +|...++.+.+.
T Consensus 602 --~-----------------------l~-------~~el~~~~----~~~~-------VfAr~sPe--~K~~IV~~Lq~~ 636 (902)
T PRK10517 602 --T-----------------------LS-------DDELANLA----ERTT-------LFARLTPM--HKERIVTLLKRE 636 (902)
T ss_pred --h-----------------------CC-------HHHHHHHH----hhCc-------EEEEcCHH--HHHHHHHHHHHC
Confidence 0 00 01222222 1111 23345454 698888887553
Q ss_pred hhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHH
Q 045882 757 MISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALL 824 (832)
Q Consensus 757 l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L 824 (832)
| .-|.++||+.||.+.|+.|+ ++++||+. +..|+.++ ++...+.+.+
T Consensus 637 ----G---~vVam~GDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAAD--------------IGISVDGAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCC--------------EEEEeCCcCHHHHHhCCEEEecCChHHHHHHH
Confidence 3 46899999999999999998 57888753 67788887 3444554444
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.14 Score=59.63 Aligned_cols=67 Identities=21% Similarity=0.271 Sum_probs=47.8
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC----cccccceEeC
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ----KPSKARYYLD 815 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~----~~s~A~y~l~ 815 (832)
+-...-|+..++.|.++- | ..|.||||+.||..|.+.|+-+ +++ +|+ +.-+|+|-+.
T Consensus 763 RctPtQKA~v~~llq~~t---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSIt 823 (1051)
T KOG0210|consen 763 RCTPTQKAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSIT 823 (1051)
T ss_pred ecChhHHHHHHHHHHHhh---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHH
Confidence 444557988887776654 3 6799999999999999999754 333 343 3567888776
Q ss_pred ChhHHHHHHH
Q 045882 816 DEEDVLALLK 825 (832)
Q Consensus 816 ~~~eV~~~L~ 825 (832)
....|-++|-
T Consensus 824 qF~Hv~rLLl 833 (1051)
T KOG0210|consen 824 QFSHVSRLLL 833 (1051)
T ss_pred HHHHHHHHhh
Confidence 6666666654
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.03 Score=55.82 Aligned_cols=56 Identities=18% Similarity=0.170 Sum_probs=44.2
Q ss_pred ccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCC-hhhHHHHh
Q 045882 576 RTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRG-KVSLGEWL 634 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~~ 634 (832)
+...+++++|+||||+... ...+-+.+.++|+.| ++.|..++|+|+.+ ...+..++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~~~~~~~~~~ 78 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD--HNEAYPALRDWIEEL-KAAGRKLLIVSNNAGEQRAKAVE 78 (170)
T ss_pred HCCCCEEEEecCCccccCC--CCCcChhHHHHHHHH-HHcCCEEEEEeCCchHHHHHHHH
Confidence 4578999999999999842 336778999999999 68899999999998 44444443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.47 Score=51.46 Aligned_cols=166 Identities=14% Similarity=0.143 Sum_probs=111.6
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHh-------CCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKV-------HPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG 405 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~-------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~ 405 (832)
...++++--...+...+.-+|.|.+..-++ +|. + |.+|+ |.||..+.+.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 457889999999999999999999854221 232 2 33444 4678777788877765
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcCc--ceecccccCCCCcc--eeeeeeecCCCCchhhhhhhcCCCCCceEEeccC
Q 045882 406 VPGYEPVILIDRPVPLHEKTAYYALAEC--CIVNAVRDGMNLMP--YKYTICRQGTPKMDEAMELASVCPRTSMLVISEF 481 (832)
Q Consensus 406 ~~~~~pv~~~~~~v~~~el~aly~~ADv--~vvtS~~EGmnLv~--~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (832)
.|+.|.+.+--++-++.+.++..||. |+-||. -|+-|.. ..-.-| +-|+++-.|
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-------------------glPvcA~~f 373 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-------------------GLPVCAVNF 373 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-------------------CCceeeecc
Confidence 56778888888999999999999995 556664 4555442 333344 235666677
Q ss_pred ccccccC---CCceEeCCCCHHHHHHHHHHHhcC-C--HHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 482 IGCSPSL---SGAIRVNPWDIDAVADALHDAITM-S--DVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 482 ~G~s~~l---~~a~~VnP~d~~~~A~ai~~aL~m-~--~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
.-..+.+ .+|++++ |.+++|+.|..+.+- | ..+-. +.++.+.+..-.+|..++-+.+
T Consensus 374 kcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 374 KCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred hhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHHhh
Confidence 6444444 3589885 899999999999872 2 22221 3333344445677887765543
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.12 Score=64.82 Aligned_cols=137 Identities=14% Similarity=0.174 Sum_probs=88.2
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPV 676 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 676 (832)
...|-+++.+++++| ++.|+.|+++||-........-++++ +. ++.. ..
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~lG---I~--~~~v------------i~------------- 596 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICREVG---LE--PGEP------------LL------------- 596 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC---CC--CCCc------------cc-------------
Confidence 446778999999999 78899999999999999988887654 21 1100 00
Q ss_pred HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHh
Q 045882 677 MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLST 756 (832)
Q Consensus 677 ~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 756 (832)
|..++ ..+ ..++.+. +.+. .-+-.+.|. +|...++.+.+.
T Consensus 597 ---------G~el~-----------~~~-------~~el~~~----v~~~-------~VfAr~sPe--~K~~iV~~Lq~~ 636 (903)
T PRK15122 597 ---------GTEIE-----------AMD-------DAALARE----VEER-------TVFAKLTPL--QKSRVLKALQAN 636 (903)
T ss_pred ---------hHhhh-----------hCC-------HHHHHHH----hhhC-------CEEEEeCHH--HHHHHHHHHHhC
Confidence 00000 000 0122222 2221 123445555 698888887653
Q ss_pred hhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC----cccccceEe--CChhHHHHHHH
Q 045882 757 MISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ----KPSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 757 l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~----~~s~A~y~l--~~~~eV~~~L~ 825 (832)
| .-|.++||+.||.++|+.|+ ++++||+ ++..|+.++ ++-..+.+.++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDAD--------------VGISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCC--------------EEEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 46899999999999999998 6788885 367788887 34555544443
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.012 Score=58.44 Aligned_cols=58 Identities=19% Similarity=0.212 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC-----cccccceEeCChhH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ-----KPSKARYYLDDEED 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~-----~~s~A~y~l~~~~e 819 (832)
.|+.++..+.+ |.....++++||+.||++|..-+.. |-..-|+ .+..|+||+++...
T Consensus 159 gKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~a-------------fi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 159 GKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADA-------------FIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred ccHHHHHHHHh-----CCChheeEEecCCccccccCCchhh-------------hhccCCceEcHhhHhccHHHHHHHHH
Confidence 69999998877 5677899999999999998876543 2222222 25678888765544
Q ss_pred H
Q 045882 820 V 820 (832)
Q Consensus 820 V 820 (832)
+
T Consensus 221 L 221 (227)
T KOG1615|consen 221 L 221 (227)
T ss_pred H
Confidence 3
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.19 Score=64.31 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 598 KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 598 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
..+.+++.+++++| ++.|++++++||...........++
T Consensus 655 d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~~~ 693 (1054)
T TIGR01657 655 NPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVAREC 693 (1054)
T ss_pred cCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 45778999999999 7889999999999999998887764
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.14 Score=64.11 Aligned_cols=137 Identities=14% Similarity=0.153 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPV 676 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 676 (832)
...|-+++.+++++| ++.|++++++||-........-++++ +. .+ .. ..
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~lG---I~--~~--------~v----~~------------- 561 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQEVG---ID--AN--------DF----LL------------- 561 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcC---CC--CC--------Ce----ee-------------
Confidence 346778999999999 78899999999999999988887654 21 00 00 00
Q ss_pred HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHh
Q 045882 677 MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLST 756 (832)
Q Consensus 677 ~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 756 (832)
|..++. .. ..++.+. +.+.. -+-.+.|. .|...++.+.+.
T Consensus 562 ---------g~~l~~---------------~~---~~el~~~----~~~~~-------vfAr~~Pe--~K~~iV~~lq~~ 601 (867)
T TIGR01524 562 ---------GADIEE---------------LS---DEELARE----LRKYH-------IFARLTPM--QKSRIIGLLKKA 601 (867)
T ss_pred ---------cHhhhh---------------CC---HHHHHHH----hhhCe-------EEEECCHH--HHHHHHHHHHhC
Confidence 000000 00 0122222 21111 23334444 698888887543
Q ss_pred hhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHHH
Q 045882 757 MISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 757 l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L~ 825 (832)
| ..|.++||+.||.++|+.|+ ++++||.. +..|+.++ ++...+...+.
T Consensus 602 ----G---~vVam~GDGvNDapALk~Ad--------------VGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKAD--------------VGISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCC--------------EEEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 46999999999999999998 57788753 67788877 34455544443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.051 Score=55.28 Aligned_cols=37 Identities=24% Similarity=0.193 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+-...+.+++.+ |+++++++.|||+.+|+..-+.+|.
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~ 186 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGF 186 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCC
Confidence 356778888888 9999999999999999999998886
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.048 Score=57.35 Aligned_cols=62 Identities=18% Similarity=0.241 Sum_probs=46.0
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCC-----C--------------------------CCCCCHHHHHHHHHhhc
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA-----L--------------------------IKKPSRDVIYVLRELCG 613 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~-----~--------------------------~~~~s~~~~~~L~~L~~ 613 (832)
.++++|.+.-...+.-.|++|+|||+++..+ . ...|-+.+.++|+.| +
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L-~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMH-V 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHH-H
Confidence 7889998876554556999999999996211 0 011234488899999 6
Q ss_pred cCCCeEEEEcCCCh
Q 045882 614 DSNNTTFIVSGRGK 627 (832)
Q Consensus 614 d~g~~V~I~SGR~~ 627 (832)
+.|+.++++|||+.
T Consensus 128 ~~G~~I~iVTnR~~ 141 (237)
T PRK11009 128 KRGDSIYFITGRTA 141 (237)
T ss_pred HCCCeEEEEeCCCC
Confidence 78999999999963
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.044 Score=57.07 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=45.7
Q ss_pred cCcEEEEEecCCCcCCCCC-----------------------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhh---H
Q 045882 577 TSRRAIFLDYDGTVVPHHA-----------------------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS---L 630 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l 630 (832)
.++-+++||+|.|++...+ ....+-+.++++++.| ++.|+.|+++|||+... .
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHH
Confidence 3567999999999997321 1234558899999999 68899999999999665 5
Q ss_pred HHHhcCC
Q 045882 631 GEWLAPC 637 (832)
Q Consensus 631 ~~~~~~l 637 (832)
.+++...
T Consensus 154 ~~nL~~~ 160 (229)
T TIGR01675 154 LDNLINA 160 (229)
T ss_pred HHHHHHc
Confidence 5666543
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.046 Score=59.61 Aligned_cols=58 Identities=22% Similarity=0.292 Sum_probs=46.7
Q ss_pred CcEEEEEecCCCcCCCCCC---------CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 578 SRRAIFLDYDGTVVPHHAL---------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~---------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
+.+++++|+||||...... +..+.+.+.++|++| ++.|..++|+|||+.......+..
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHHHH
Confidence 4589999999999973321 346778999999999 578999999999999887766553
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.25 Score=61.00 Aligned_cols=167 Identities=17% Similarity=0.166 Sum_probs=101.0
Q ss_pred HHhhccCcEEEEEec---CC--CcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeC
Q 045882 572 DAYKRTSRRAIFLDY---DG--TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEH 646 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~---DG--TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaen 646 (832)
+.+.....|.+.+=+ ++ +++.--....+|-+++.+++++| ++.|++|+++||.........-++++-.. +
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 484 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARRLGLGT----N 484 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcCCCC----C
Confidence 334445567777655 33 44432123456788999999999 78899999999999999999888764110 0
Q ss_pred CEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC
Q 045882 647 GYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE 726 (832)
Q Consensus 647 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~ 726 (832)
+ ... +.+ . .|.. ... . ...++.+. +.+.
T Consensus 485 ---~-----------~~~------~~l-------~---~~~~-----------~~~----~---~~~~~~~~----~~~~ 512 (755)
T TIGR01647 485 ---I-----------YTA------DVL-------L---KGDN-----------RDD----L---PSGELGEM----VEDA 512 (755)
T ss_pred ---C-----------cCH------HHh-------c---CCcc-----------hhh----C---CHHHHHHH----HHhC
Confidence 0 000 000 0 0000 000 0 01222222 2222
Q ss_pred CEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc
Q 045882 727 PVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK 806 (832)
Q Consensus 727 ~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~ 806 (832)
. -+-++.|. +|...++.+.+. | .-|.++||+.||.+.|+.|+ +++++|+.
T Consensus 513 ~-------vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~Ad--------------VGIAm~~g 562 (755)
T TIGR01647 513 D-------GFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKAD--------------VGIAVAGA 562 (755)
T ss_pred C-------EEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCC--------------eeEEecCC
Confidence 1 24455565 698888887543 3 46999999999999999997 57777753
Q ss_pred ----ccccceEe--CChhHHHHHHH
Q 045882 807 ----PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 807 ----~s~A~y~l--~~~~eV~~~L~ 825 (832)
+..|+.++ ++...+...++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 56788777 34555555443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.041 Score=51.25 Aligned_cols=54 Identities=28% Similarity=0.356 Sum_probs=42.9
Q ss_pred CCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--cc----cccceEeCChhHHHHHHHHh
Q 045882 761 GKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KP----SKARYYLDDEEDVLALLKGL 827 (832)
Q Consensus 761 gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~----s~A~y~l~~~~eV~~~L~~l 827 (832)
+.+.++++++||+.||+.|++.+.-+ -|++++ .+ ..|++++.+..+++.++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 44668999999999999999999865 356664 34 45888999999988887654
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.15 Score=64.13 Aligned_cols=42 Identities=17% Similarity=0.296 Sum_probs=36.1
Q ss_pred CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 596 LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 596 ~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
...+|-+++.++++.| ++.|++++++||-........-.+++
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~G 585 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKECG 585 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHcC
Confidence 4456778999999998 78999999999999999988887764
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.75 E-value=1.7 Score=48.44 Aligned_cols=293 Identities=17% Similarity=0.159 Sum_probs=145.2
Q ss_pred HhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcc--cccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHH
Q 045882 175 LLWRAYVSANKVFADKIMEVINPEEDYVWIHDYH--LMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKAL 252 (832)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyh--l~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~l 252 (832)
..|..|++.=+.+ .+ -+| |++..=|+- -..+...||+..|++||..+.- ||--.|| |.|...+..
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---PsVWAWr--~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---PSVWAWR--PKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---cceeeec--hhhHHHHHH-
Confidence 4566665443332 22 245 776666654 2346788999999999987553 4433444 666444444
Q ss_pred HhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-
Q 045882 253 LNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF- 331 (832)
Q Consensus 253 l~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~- 331 (832)
.+|++.--.+.-..-|- + .|+. ..|-|++. .|.-.+. ++ .+..|+++
T Consensus 136 -~~D~lLailPFE~~~y~----k-~g~~---------~~yVGHpl--------~d~i~~~-----~~----r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILPFEPAFYD----K-FGLP---------CTYVGHPL--------ADEIPLL-----PD----REAAREKLG 183 (381)
T ss_pred -HhhHeeeecCCCHHHHH----h-cCCC---------eEEeCChh--------hhhcccc-----cc----HHHHHHHhC
Confidence 24554432222221111 0 1111 23334332 1111111 11 22244554
Q ss_pred ---CCCEEEEEec--cccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCC
Q 045882 332 ---KGKKVIVGVD--DMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGV 406 (832)
Q Consensus 332 ---~~~~vil~Vd--Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~ 406 (832)
..+.+.+--| |=+...-.+..++|+++|.+++|+.+ ++.-..+ +.++.++.+ ....-.. +
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~~--~- 248 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEVA--G- 248 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhcccc--C-
Confidence 3454444333 44556667778899999999999988 6544433 233333332 2111100 0
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccc
Q 045882 407 PGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSP 486 (832)
Q Consensus 407 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~ 486 (832)
..++.+ ..+....+.+||+.+..| |.+.+|++.|+.|..-.-++.-...-- .-.+|-..+++...
T Consensus 249 ---~~~~~~-----~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~i--ak~lvk~~yisLpN 313 (381)
T COG0763 249 ---LSLILI-----DGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFI--AKRLVKLPYVSLPN 313 (381)
T ss_pred ---ceEEec-----CchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHH--HHHhccCCcccchH
Confidence 112222 447888899999999999 789999999976520000000000000 00122233344333
Q ss_pred cCCCceEeC-----CCCHHHHHHHHHHHhcCCH--HHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 487 SLSGAIRVN-----PWDIDAVADALHDAITMSD--VEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 487 ~l~~a~~Vn-----P~d~~~~A~ai~~aL~m~~--~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
.+.|-.+|+ -..++.+|+++...+..+. ++..+..+.+++++.+..+..-+.+.+-
T Consensus 314 Ii~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl 376 (381)
T COG0763 314 ILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVL 376 (381)
T ss_pred HhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 333322221 1246788999998887552 2223344455566655534444444433
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.74 E-value=2.1 Score=48.16 Aligned_cols=252 Identities=19% Similarity=0.251 Sum_probs=133.0
Q ss_pred HhCCCCCEEEEeCccc--ccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHH
Q 045882 194 VINPEEDYVWIHDYHL--MVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 194 ~~~~~~d~vwvhDyhl--~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~ 271 (832)
..+| |+|..=||-= +-+...+|++.+..|+.++. +|.+|.==++|-..++.....=+..| .+-..|..
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~if---PFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIF---PFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECC---cccHHHHh
Confidence 3466 7877777763 34678899999887786644 23444333677776766433322222 11122221
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--CCCEE--EEEecccccc-
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKV--IVGVDDMDIF- 346 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~v--il~VdRld~~- 346 (832)
+.| +-..|-|++. +|. . ...+.. ...++.+ .++++ ++-=+|-...
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~--~---~~~~~~----~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDE--V---KPEPDR----AEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhh--h---ccCCCH----HHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1234445442 111 1 111111 1112222 33432 3334566544
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
+.++..++|++++.+++|+++ ++....+. . ..+.+.+.....+.. .+++.+ ..+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~-----~~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII-----EGESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc-----CCchHH
Confidence 445888999999999999987 66554332 1 112233332222111 123332 236778
Q ss_pred HHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCc-----eEeCCCCHHH
Q 045882 427 YYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGA-----IRVNPWDIDA 501 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a-----~~VnP~d~~~ 501 (832)
.+++||+.+++| |.+.+|+...+.|.--.=+..-.+. -=...+|-..+.|....+-+. ++-+-.+++.
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~--~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTY--FIAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHH--HHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 899999999999 7889999888665200000000000 000123446667766666332 4445668899
Q ss_pred HHHHHHHHhcCCHH
Q 045882 502 VADALHDAITMSDV 515 (832)
Q Consensus 502 ~A~ai~~aL~m~~~ 515 (832)
+++++...|+.++.
T Consensus 330 i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 330 IAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhcCHHH
Confidence 99999999985543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.31 Score=62.67 Aligned_cols=40 Identities=10% Similarity=0.059 Sum_probs=33.3
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
...+-+.+.+++++| ++.|+.|+++||-........-..+
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~s~ 763 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGYSS 763 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHh
Confidence 445778999999999 6889999999999999887776543
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.032 Score=58.81 Aligned_cols=50 Identities=20% Similarity=0.269 Sum_probs=41.3
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEc---CCChhhHHHHhcC
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVS---GRGKVSLGEWLAP 636 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~ 636 (832)
++||+||||++ ... +-+.+.++|+.| +..|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~-~~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHK-PIPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCc-cCcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 343 445889999999 67899999998 9999988877765
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.059 Score=55.42 Aligned_cols=65 Identities=14% Similarity=0.045 Sum_probs=45.5
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCccc---ccce--EeCC
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPS---KARY--YLDD 816 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s---~A~y--~l~~ 816 (832)
.+-.|...++.+. .. |. .++++||+.||++|++.++. +|.+..||. .|+- .+.+
T Consensus 129 ~~~~K~~~l~~l~-~~---~~---~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~ 187 (203)
T TIGR02137 129 QKDPKRQSVIAFK-SL---YY---RVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHT 187 (203)
T ss_pred CcchHHHHHHHHH-hh---CC---CEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccC
Confidence 3457888888873 33 43 79999999999999999985 466666542 3332 3456
Q ss_pred hhHHHHHHHHh
Q 045882 817 EEDVLALLKGL 827 (832)
Q Consensus 817 ~~eV~~~L~~l 827 (832)
.+|++..+..-
T Consensus 188 ~~~~~~~~~~~ 198 (203)
T TIGR02137 188 YEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHHH
Confidence 77777776654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.15 Score=65.39 Aligned_cols=185 Identities=16% Similarity=0.150 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchh-HHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFE-WKRITEP 675 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~-w~~~v~~ 675 (832)
..++-+.+.+++++| ++.|++|+++||-....+...-..+. ++..+...+....+.. .+.. ..+.+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~~~---ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYSCR---LLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHHhC---CCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 445667888888888 68899999999999999888765542 3333332222211110 0000 0011111
Q ss_pred HHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHH
Q 045882 676 VMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLS 755 (832)
Q Consensus 676 i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~ 755 (832)
.++...+... .....+..++...-. .+......++.+++..++......| +-.+.| -.|+..++.+.+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G~----~l~~~l~~~~~~~f~~l~~~~~~vV-----~aR~sP--~qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDGK----SLGYALDEELEKEFLQLALKCKAVI-----CCRVSP--SQKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEccH----HHHHHHhhHHHHHHHHHHhhCCEEE-----EeCCCH--HHHHHHHHHHHh
Confidence 1111100000 000012222222211 0000000112223333332222111 223334 479999988865
Q ss_pred hhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEe-CC----cccccceEeCChhHHHHHH
Q 045882 756 TMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTV-GQ----KPSKARYYLDDEEDVLALL 824 (832)
Q Consensus 756 ~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v-G~----~~s~A~y~l~~~~eV~~~L 824 (832)
.. | .-|+++||+.||.+|++.|+- +|.+ |. +...|+|.+.+-..+.++|
T Consensus 766 ~~---~---~~vl~iGDG~ND~~mlk~AdV--------------GIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST---G---KTTLAIGDGANDVSMIQEADV--------------GVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC---C---CeEEEEeCCCccHHHHhhcCe--------------eeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 42 2 469999999999999999984 4443 32 3457888887766666555
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.073 Score=56.49 Aligned_cols=50 Identities=16% Similarity=0.179 Sum_probs=38.5
Q ss_pred CcEEEEEecCCCcCCCCC-----------------C-------CCCCCHHHHHHHHHhhccCCCeEEEEcCCChh
Q 045882 578 SRRAIFLDYDGTVVPHHA-----------------L-------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKV 628 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~-----------------~-------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 628 (832)
.+-++++|+|+|++...+ . ..++-+.+++..+.| ++.|+.|+++|||+-.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchh
Confidence 457999999999994110 1 223457889999999 6889999999999854
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.056 Score=54.07 Aligned_cols=58 Identities=26% Similarity=0.176 Sum_probs=44.5
Q ss_pred cEEEEEecCCCcCCCCCC-----------------------CCCCCHHHHHHHHHhhccCCCeEEEEcCC-ChhhHHHHh
Q 045882 579 RRAIFLDYDGTVVPHHAL-----------------------IKKPSRDVIYVLRELCGDSNNTTFIVSGR-GKVSLGEWL 634 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~-----------------------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~ 634 (832)
.||++||+|+||.++... ...+-+.+.++|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 489999999999975310 012347889999999 6789999999998 777777776
Q ss_pred cCC
Q 045882 635 APC 637 (832)
Q Consensus 635 ~~l 637 (832)
..+
T Consensus 81 ~~~ 83 (174)
T TIGR01685 81 GTF 83 (174)
T ss_pred HhC
Confidence 543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.027 Score=55.54 Aligned_cols=44 Identities=30% Similarity=0.343 Sum_probs=31.7
Q ss_pred EEEEEecCCCcCCCCCCCC---------CCCHHHHHHHHHhhccCCCeEEEEcC
Q 045882 580 RAIFLDYDGTVVPHHALIK---------KPSRDVIYVLRELCGDSNNTTFIVSG 624 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~---------~~s~~~~~~L~~L~~d~g~~V~I~SG 624 (832)
|+.+||+||||....+... ...+.+.++|++| .+.|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeC
Confidence 5889999999997543111 1345799999999 678999999984
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.19 Score=64.14 Aligned_cols=41 Identities=5% Similarity=0.031 Sum_probs=35.4
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
...|-+++.++++++ ++.|++|+++||........+-.+++
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~~~G 684 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQEVG 684 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcC
Confidence 446778999999998 78999999999999999998887653
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.29 Score=57.52 Aligned_cols=60 Identities=12% Similarity=0.123 Sum_probs=42.7
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
...+.+++=++++++..-.....+-+++.++++.| ++.|+.++++||.........-..+
T Consensus 325 ~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 325 SGLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred CCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 34455555577766642213445667888888888 5689999999999999888877665
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.067 Score=62.55 Aligned_cols=50 Identities=18% Similarity=0.208 Sum_probs=39.1
Q ss_pred cCcEEEEEecCCCcCCCCCCC---------CCCCHHHHHHHHHhhccCCCeEEEEcCCCh
Q 045882 577 TSRRAIFLDYDGTVVPHHALI---------KKPSRDVIYVLRELCGDSNNTTFIVSGRGK 627 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~---------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 627 (832)
.+.|+++||+||||....+.. ..+-+.+.++|++| .+.|..++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCcc
Confidence 567999999999999743211 12457889999999 688999999998665
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.055 Score=57.87 Aligned_cols=59 Identities=25% Similarity=0.242 Sum_probs=42.9
Q ss_pred cCcEEEEEecCCCcCCCCC-------C----------------CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhH---
Q 045882 577 TSRRAIFLDYDGTVVPHHA-------L----------------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSL--- 630 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~-------~----------------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l--- 630 (832)
.++.+|++|+|+|++...+ . ...+-+.+.++|+.| ++.|..++|+|+|+....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHHHH
Confidence 5678999999999986321 0 112346778999999 678999999999985543
Q ss_pred HHHhcC
Q 045882 631 GEWLAP 636 (832)
Q Consensus 631 ~~~~~~ 636 (832)
..++..
T Consensus 152 ~~~Lkk 157 (266)
T TIGR01533 152 LKNLKR 157 (266)
T ss_pred HHHHHH
Confidence 355554
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.17 Score=51.68 Aligned_cols=67 Identities=19% Similarity=0.284 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChh
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEE 818 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~ 818 (832)
.|...+..+++.+ |++++++++|||+.+|+.+-+.+|.. +++|.-|.. ...|+|.+++..
T Consensus 132 P~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~ 197 (205)
T TIGR01454 132 PAPDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQ 197 (205)
T ss_pred CChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHH
Confidence 3567778888888 99999999999999999999999863 356666642 356899999999
Q ss_pred HHHHHHH
Q 045882 819 DVLALLK 825 (832)
Q Consensus 819 eV~~~L~ 825 (832)
++..++.
T Consensus 198 ~l~~~~~ 204 (205)
T TIGR01454 198 SLLALCR 204 (205)
T ss_pred HHHHHhh
Confidence 9887664
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.067 Score=54.53 Aligned_cols=43 Identities=16% Similarity=0.084 Sum_probs=37.9
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
..+-.|..+++.+++.. +++++.++++||+.+|++|++.++..
T Consensus 151 ~~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 151 CKGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CCChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 34567888899999887 89999999999999999999999864
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.092 Score=52.06 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=31.7
Q ss_pred hhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhh
Q 045882 574 YKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELC 612 (832)
Q Consensus 574 y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~ 612 (832)
.++...|.++||.|.||+++ ....++++..+.++++.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~ 72 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELK 72 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHH
Confidence 35678999999999999975 56778899999999984
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.37 Score=46.84 Aligned_cols=100 Identities=16% Similarity=0.265 Sum_probs=49.8
Q ss_pred HHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchH-HH----HHH-HHhCCEEeec
Q 045882 188 ADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRN-EI----LKA-LLNADLIGFH 261 (832)
Q Consensus 188 a~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~-~i----l~~-ll~~dligf~ 261 (832)
..++++..++ |+|++|.++...+..+... +.++.+++|.+++.........+.. .+ .+. .-.+|.+-.-
T Consensus 72 ~~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~v 146 (177)
T PF13439_consen 72 LRRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAV 146 (177)
T ss_dssp HHHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEES
T ss_pred HHHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEE
Confidence 3444555566 8999999998776544333 8899999998874311111111111 11 111 2357777666
Q ss_pred ChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHH
Q 045882 262 TFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLE 312 (832)
Q Consensus 262 t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~ 312 (832)
+..-++.+.+ .|+. ..++.++|+|||.++|+
T Consensus 147 S~~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 147 SESTKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp SHHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred CHHHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 6544444432 2221 13678899999999874
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.54 Score=53.56 Aligned_cols=138 Identities=9% Similarity=0.075 Sum_probs=79.2
Q ss_pred CEEEEEecc-ccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhc---------c
Q 045882 334 KKVIVGVDD-MDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINE---------T 403 (832)
Q Consensus 334 ~~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~---------~ 403 (832)
..++++-.| =+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 355677778 55667888999999998655 5443 55544332 2333344333221 0000 0
Q ss_pred cCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc
Q 045882 404 YGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG 483 (832)
Q Consensus 404 ~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (832)
|.. ..+.++. ...+..++|++||++|..| |-+..|+++++.| .|+--+.+
T Consensus 276 ~~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P-------------------~Ilip~~~ 325 (396)
T TIGR03492 276 FQK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP-------------------VIQLPGKG 325 (396)
T ss_pred hcc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC-------------------EEEEeCCC
Confidence 000 0122222 2457899999999999886 3455899998654 33322111
Q ss_pred c------ccc---C-CCceEeCCCCHHHHHHHHHHHhcC
Q 045882 484 C------SPS---L-SGAIRVNPWDIDAVADALHDAITM 512 (832)
Q Consensus 484 ~------s~~---l-~~a~~VnP~d~~~~A~ai~~aL~m 512 (832)
- .+. + .+++.+...+.+.+++++.+.++.
T Consensus 326 ~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 326 PQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred CHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC
Confidence 1 011 1 345555567789999999999874
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.16 Score=52.03 Aligned_cols=64 Identities=17% Similarity=0.145 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChhH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEED 819 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~e 819 (832)
+-..+..+++.+ |++++++++|||+.+|+.+.+.+|.. ++.|.-|.. ...|.|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 456788888988 99999999999999999999999863 234433431 2458899999888
Q ss_pred HHHH
Q 045882 820 VLAL 823 (832)
Q Consensus 820 V~~~ 823 (832)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.97 Score=52.08 Aligned_cols=132 Identities=18% Similarity=0.191 Sum_probs=72.2
Q ss_pred ecCCCchHHHhhcCCCC-hHHH-HHHHHHHc---CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEec
Q 045882 303 HVGIHMGRLESALNHPS-SSIK-VKEIREQF---KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVN 377 (832)
Q Consensus 303 P~GId~~~~~~~~~~~~-~~~~-~~~l~~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 377 (832)
-+|.-..+....+...+ +... +...|++| +|..++.+..++. |=-+..+..+.++|++-|+-+ |++...
T Consensus 249 ~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~~--KI~p~~l~~W~~IL~~vP~S~----L~L~~~ 322 (468)
T PF13844_consen 249 QNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNLF--KISPETLDLWARILKAVPNSR----LWLLRF 322 (468)
T ss_dssp EECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-GG--G--HHHHHHHHHHHHHSTTEE----EEEEET
T ss_pred ecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCccc--cCCHHHHHHHHHHHHhCCCcE----EEEeeC
Confidence 56777766654332221 1100 11124455 4667777777664 556888999999999999876 777665
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeec
Q 045882 378 PARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 378 p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
|. .+ ++.+.+.+++ .|- +-.-++|. +..+.++..+.|+.+|||+-|..+-| +.+.+||+.++.
T Consensus 323 ~~--~~------~~~l~~~~~~----~Gv-~~~Ri~f~-~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmGV 385 (468)
T PF13844_consen 323 PA--SG------EARLRRRFAA----HGV-DPDRIIFS-PVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMGV 385 (468)
T ss_dssp ST--TH------HHHHHHHHHH----TTS--GGGEEEE-E---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT-
T ss_pred CH--HH------HHHHHHHHHH----cCC-ChhhEEEc-CCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcCC
Confidence 43 11 1223333332 242 22346654 46788999999999999999987766 466789999843
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.17 Score=51.56 Aligned_cols=65 Identities=15% Similarity=0.192 Sum_probs=44.3
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccce-EeCChh
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARY-YLDDEE 818 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y-~l~~~~ 818 (832)
-.|..+++.+ +..++.+++|||+.||++|.+.++.+ |.++.+ ...+.+ .+++..
T Consensus 131 ~~k~~~l~~~-------~~~~~~~v~iGDs~~D~~~~~aa~~~--------------v~~~~~~~~~~~~~~~~~~~~~~ 189 (205)
T PRK13582 131 DGKRQAVKAL-------KSLGYRVIAAGDSYNDTTMLGEADAG--------------ILFRPPANVIAEFPQFPAVHTYD 189 (205)
T ss_pred chHHHHHHHH-------HHhCCeEEEEeCCHHHHHHHHhCCCC--------------EEECCCHHHHHhCCcccccCCHH
Confidence 3565555543 33457899999999999999999842 334432 123454 688999
Q ss_pred HHHHHHHHhhh
Q 045882 819 DVLALLKGLAA 829 (832)
Q Consensus 819 eV~~~L~~l~~ 829 (832)
++...|.....
T Consensus 190 el~~~l~~~~~ 200 (205)
T PRK13582 190 ELLAAIDKASA 200 (205)
T ss_pred HHHHHHHHHHh
Confidence 99888876543
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=92.61 E-value=4.4 Score=45.60 Aligned_cols=71 Identities=11% Similarity=0.082 Sum_probs=48.4
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc-CC-C
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS-LS-G 490 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~-l~-~ 490 (832)
+.+.++++..++.++++.|+++|-.|. =++ .||.+.+.| ++.+.+ .++ +. |
T Consensus 264 v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~P------------------vv~l~~----R~e~~~~g 316 (365)
T TIGR03568 264 FRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVP------------------TINIGT----RQKGRLRA 316 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCC------------------EEeecC----Cchhhhhc
Confidence 345668999999999999999885442 122 699998553 233322 333 32 3
Q ss_pred -c-eEeCCCCHHHHHHHHHHHhc
Q 045882 491 -A-IRVNPWDIDAVADALHDAIT 511 (832)
Q Consensus 491 -a-~~VnP~d~~~~A~ai~~aL~ 511 (832)
. ++| +.|.+++.+++.++++
T Consensus 317 ~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 317 DSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred CeEEEe-CCCHHHHHHHHHHHhC
Confidence 3 447 7799999999999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.16 Score=49.28 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=43.8
Q ss_pred CcEEEEEecCCCcCCCC--C----CCC-----------------CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHh
Q 045882 578 SRRAIFLDYDGTVVPHH--A----LIK-----------------KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWL 634 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~--~----~~~-----------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 634 (832)
+++++++|+||||+... + ... .+-|.+.+.|..| + ++..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L-~-~~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRA-S-ELFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHH-H-hccEEEEEeCCcHHHHHHHH
Confidence 46789999999999842 1 001 1236788899999 4 47999999999999988877
Q ss_pred cCC
Q 045882 635 APC 637 (832)
Q Consensus 635 ~~l 637 (832)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 654
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.93 Score=45.82 Aligned_cols=55 Identities=18% Similarity=0.174 Sum_probs=40.6
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
...+-+++|+-|||-. .+. .-|...++|++| ++++..|=++|--+.++=+.+.++
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHH
Confidence 3567899999999987 333 556889999999 778898888876665554444443
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.79 Score=58.69 Aligned_cols=61 Identities=8% Similarity=0.007 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y~l~~~~eV 820 (832)
+......+++.+ |+.++++++|||+.+|+..-+.+|.. +++|.-|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 356677788888 99999999999999999999888863 244443421 35677888888775
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.18 Score=49.28 Aligned_cols=56 Identities=18% Similarity=0.256 Sum_probs=42.0
Q ss_pred EEEEecCCCcCCCCC--------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChh---hHHHHhcCC
Q 045882 581 AIFLDYDGTVVPHHA--------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKV---SLGEWLAPC 637 (832)
Q Consensus 581 lI~lD~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~---~l~~~~~~l 637 (832)
++++|+|||++..+. ......+.+.++.+++ +++|..++-+|+|+.. ..+.|+...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 479999999998421 0113457788899999 6899999999999964 555677654
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=92.12 E-value=0.45 Score=40.37 Aligned_cols=58 Identities=22% Similarity=0.320 Sum_probs=43.5
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--------ccccceEeCChh
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQATYGSSLPIAPEIFACTVGQK--------PSKARYYLDDEE 818 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--------~s~A~y~l~~~~ 818 (832)
..++.+++.+ +++++++++|||+ .+|+.+=+.+|.. .+.|.-|.. ...++|++++..
T Consensus 8 ~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 8 GMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp HHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred HHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 3456677777 8999999999999 9999999999863 244444531 246788888766
Q ss_pred H
Q 045882 819 D 819 (832)
Q Consensus 819 e 819 (832)
|
T Consensus 74 e 74 (75)
T PF13242_consen 74 E 74 (75)
T ss_dssp G
T ss_pred h
Confidence 5
|
... |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.04 E-value=0.15 Score=56.73 Aligned_cols=47 Identities=21% Similarity=0.296 Sum_probs=38.4
Q ss_pred CcEEEEEecCCCcCCCCC--------CCCCCCHHHHHHHHHhhccCCCeEEEEcCC
Q 045882 578 SRRAIFLDYDGTVVPHHA--------LIKKPSRDVIYVLRELCGDSNNTTFIVSGR 625 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 625 (832)
++|++|+|.||||....+ ....+-+.+.++|..| +++|..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~L-k~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKL-QKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHH-HhCCCeEEEEECC
Confidence 578999999999998432 1234668899999999 7889999999985
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=91.61 E-value=12 Score=41.83 Aligned_cols=254 Identities=16% Similarity=0.108 Sum_probs=126.0
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHH--hCCEEeecC
Q 045882 185 KVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALL--NADLIGFHT 262 (832)
Q Consensus 185 ~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll--~~dligf~t 262 (832)
..|++. ++..+| |+|.||.=-...|..-+-...-++||+.. |-=-=+.|. +-|.-+|+.|-+. -||+----|
T Consensus 57 ~~~~~~-~~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf~~t 130 (346)
T PF02350_consen 57 IELADV-LEREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHFAPT 130 (346)
T ss_dssp HHHHHH-HHHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEEESS
T ss_pred HHHHHH-HHhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhccCC
Confidence 334443 344578 89999988877777767666667776532 110000011 1244455555432 267766667
Q ss_pred hhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecc
Q 045882 263 FDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDD 342 (832)
Q Consensus 263 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdR 342 (832)
..+.++.++ .|.+. ++ + ..+-.+++|.-........+.. ....+.....++.+++..=|
T Consensus 131 ~~~~~~L~~-----~G~~~--~r----I--------~~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~H~ 189 (346)
T PF02350_consen 131 EEARERLLQ-----EGEPP--ER----I--------FVVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTLHP 189 (346)
T ss_dssp HHHHHHHHH-----TT--G--GG----E--------EE---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-S-
T ss_pred HHHHHHHHh-----cCCCC--Ce----E--------EEEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEeCc
Confidence 777776653 24321 11 1 1123456665433322111111 01223222345556666655
Q ss_pred cccc---CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC
Q 045882 343 MDIF---KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419 (832)
Q Consensus 343 ld~~---KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v 419 (832)
.... ......+.+++.+.+. +++. +|....++ +.....+.+...++ ..+.++ .++
T Consensus 190 ~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~~---------~~v~~~-~~l 247 (346)
T PF02350_consen 190 VTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKKY---------DNVRLI-EPL 247 (346)
T ss_dssp CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TTEEEE----
T ss_pred chhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhccc---------CCEEEE-CCC
Confidence 5543 3456777788888777 5543 55444322 12233333322222 125554 479
Q ss_pred CHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---CCceEeCC
Q 045882 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL---SGAIRVNP 496 (832)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l---~~a~~VnP 496 (832)
+..++.++++.|+++|-.|- | +..||..++.| +|.=...|-.++. ...++| +
T Consensus 248 ~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~P-------------------~v~iR~~geRqe~r~~~~nvlv-~ 302 (346)
T PF02350_consen 248 GYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGKP-------------------VVNIRDSGERQEGRERGSNVLV-G 302 (346)
T ss_dssp -HHHHHHHHHHESEEEESSH--H---HHHHGGGGT---------------------EEECSSS-S-HHHHHTTSEEEE-T
T ss_pred CHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCCe-------------------EEEecCCCCCHHHHhhcceEEe-C
Confidence 99999999999999887763 2 22388888543 3433444444444 345666 4
Q ss_pred CCHHHHHHHHHHHhcC
Q 045882 497 WDIDAVADALHDAITM 512 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m 512 (832)
.|.+++.+||.+++..
T Consensus 303 ~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 303 TDPEAIIQAIEKALSD 318 (346)
T ss_dssp SSHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhC
Confidence 8999999999999974
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.16 E-value=25 Score=39.43 Aligned_cols=137 Identities=15% Similarity=0.171 Sum_probs=85.4
Q ss_pred CEEEEEecccccc-CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 334 KKVIVGVDDMDIF-KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 334 ~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
+-+++..-|-.-. +++...+.|+.++++++|+.. +|--..|. +-+++.. +.+++. -..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~~----~~v~e~~----------~~~L~~--~~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHPR----PRVRELV----------LKRLKN--VERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCCC----hhhhHHH----------HHHhCC--CCcE
Confidence 4677777787766 999999999999999998765 44333221 2222221 112222 1124
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC-C-
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-G- 490 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-~- 490 (832)
.++ .++...+...|...|-+.+--| |=..-||-.-+. -++++-+.+.=.+.+. |
T Consensus 265 ~li-~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~------------------Pvl~lR~~TERPE~v~agt 320 (383)
T COG0381 265 KLI-DPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK------------------PVLVLRDTTERPEGVEAGT 320 (383)
T ss_pred EEe-CCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC------------------cEEeeccCCCCccceecCc
Confidence 444 5899999999999996655444 122234444322 1455555555555553 3
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCCHH
Q 045882 491 AIRVNPWDIDAVADALHDAITMSDV 515 (832)
Q Consensus 491 a~~VnP~d~~~~A~ai~~aL~m~~~ 515 (832)
.++|+ .|.+.+.+++.++++.++.
T Consensus 321 ~~lvg-~~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 321 NILVG-TDEENILDAATELLEDEEF 344 (383)
T ss_pred eEEeC-ccHHHHHHHHHHHhhChHH
Confidence 35665 5789999999999986543
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.025 Score=59.27 Aligned_cols=52 Identities=15% Similarity=0.208 Sum_probs=39.2
Q ss_pred cCcEEEEEecCCCcCCCCC-----------------------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhh
Q 045882 577 TSRRAIFLDYDGTVVPHHA-----------------------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS 629 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 629 (832)
.++..++||+|+|++.... ....+-+.+++.++.+ .+.|..|+++|||+...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQ 144 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTC
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchh
Confidence 5678999999999985210 0112335688999998 68899999999998773
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=91.00 E-value=0.48 Score=48.97 Aligned_cols=22 Identities=9% Similarity=0.173 Sum_probs=19.1
Q ss_pred ceEEEEeCChhhHHHHHHcccc
Q 045882 765 DFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 765 d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+...+.|||.||.+||+.+++.
T Consensus 176 ~~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 176 KLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred hheEEecCCcccHHHHHhCCCc
Confidence 3458999999999999999863
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.76 E-value=0.24 Score=50.56 Aligned_cols=35 Identities=14% Similarity=0.017 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 602 RDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 602 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
+.+.++|+.| ++. +.++|+|+.....+..++..++
T Consensus 71 pg~~e~L~~L-~~~-~~~~IvS~~~~~~~~~~l~~~g 105 (205)
T PRK13582 71 PGAVEFLDWL-RER-FQVVILSDTFYEFAGPLMRQLG 105 (205)
T ss_pred CCHHHHHHHH-Hhc-CCEEEEeCCcHHHHHHHHHHcC
Confidence 4456788888 455 8999999999999998887654
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=90.49 E-value=0.38 Score=48.94 Aligned_cols=37 Identities=11% Similarity=-0.011 Sum_probs=30.2
Q ss_pred CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 601 SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 601 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
-+.+.+.|+.+ ++.|..++|+||.....+..+.+.++
T Consensus 89 ~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~~lg 125 (202)
T TIGR01490 89 YPEARDLIRWH-KAEGHTIVLVSASLTILVKPLARILG 125 (202)
T ss_pred cHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHHcC
Confidence 45667788887 67899999999999998888887654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=90.42 E-value=0.42 Score=52.85 Aligned_cols=49 Identities=22% Similarity=0.276 Sum_probs=36.8
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccC----CCeEEEEc---CCChhhHHHHh
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDS----NNTTFIVS---GRGKVSLGEWL 634 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~----g~~V~I~S---GR~~~~l~~~~ 634 (832)
.++||+||||.. ...+-+...++|+.| +.. |..++++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 589999999997 445578999999999 566 88888776 55666544433
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=90.24 E-value=3.9 Score=43.54 Aligned_cols=55 Identities=15% Similarity=0.244 Sum_probs=39.8
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHH-HcccccCCCCCCCCCcEEEEEeCC
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE-SISQATYGSSLPIAPEIFACTVGQ 805 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~-~a~~~~~~~~~~~~~~~f~v~vG~ 805 (832)
.-.|.+||.++..++..+ |..|+.|+++-|+.-.+.-.+ ++.. .+-.++++.-..
T Consensus 157 ft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~--------~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 157 FTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK--------SGIDFIGFHYTG 212 (252)
T ss_pred EeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh--------CCCcEEEEEEcc
Confidence 356789999999999999 999999999999975554444 3332 223456666554
|
The function is not known. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=90.07 E-value=0.72 Score=52.19 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=56.0
Q ss_pred CHHHHHHHhhccCcEEEEEecCCCcCCCC----C---------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHH
Q 045882 566 SVDRIVDAYKRTSRRAIFLDYDGTVVPHH----A---------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGE 632 (832)
Q Consensus 566 ~~~~i~~~y~~s~~rlI~lD~DGTLl~~~----~---------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 632 (832)
.+..++.|.....+|.+++|+|+||..-. . ..+.+-.+..+.+..| .++|+.++|||=.....+.+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHH
Confidence 45577778777889999999999999611 0 1122335667788888 78999999999999999999
Q ss_pred HhcCCC
Q 045882 633 WLAPCE 638 (832)
Q Consensus 633 ~~~~l~ 638 (832)
.|...|
T Consensus 288 vF~khp 293 (574)
T COG3882 288 VFRKHP 293 (574)
T ss_pred HHhhCC
Confidence 998755
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=89.99 E-value=34 Score=38.42 Aligned_cols=150 Identities=15% Similarity=0.119 Sum_probs=81.7
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
+++.|+-+|-=--.+.+...+.+....+.+ ++.+++++.+. . +++++....++ +...|
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~------~~~v~~~~G~~----~-~~~~~~~~~~~-----------~~~~v 239 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN------RIQVIHQTGKN----D-LEELKSAYNEL-----------GVVRV 239 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh------CeEEEEEcCcc----h-HHHHHHHHhhc-----------CcEEE
Confidence 677777777544444444444444333322 45577776332 2 33333332222 11112
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc-----
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS----- 487 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~----- 487 (832)
..+ .+++.++|++||++|.=| | ++++.|..+++.| ..+|-...+--..+
T Consensus 240 ~~f-----~~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~P-----------------~IliP~p~~~~~~Q~~NA~ 293 (357)
T COG0707 240 LPF-----IDDMAALLAAADLVISRA---G-ALTIAELLALGVP-----------------AILVPYPPGADGHQEYNAK 293 (357)
T ss_pred eeH-----HhhHHHHHHhccEEEeCC---c-ccHHHHHHHhCCC-----------------EEEeCCCCCccchHHHHHH
Confidence 222 346999999999988644 2 4788899999764 23333332210112
Q ss_pred -C---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCC
Q 045882 488 -L---SGAIRVNPWD--IDAVADALHDAITMSDVEKQLRHEKHYRYICSHD 532 (832)
Q Consensus 488 -l---~~a~~VnP~d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (832)
+ ..|+.+.-++ .+.+++.|.++++. .|+..+|....+.+..-+
T Consensus 294 ~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~--~~~l~~m~~~a~~~~~p~ 342 (357)
T COG0707 294 FLEKAGAALVIRQSELTPEKLAELILRLLSN--PEKLKAMAENAKKLGKPD 342 (357)
T ss_pred HHHhCCCEEEeccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHhcCCCC
Confidence 2 2366666655 78999999999974 445555555444444433
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=89.81 E-value=0.96 Score=48.11 Aligned_cols=60 Identities=18% Similarity=0.197 Sum_probs=46.6
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
....+|++|+|.||........-+++.+.+.|.+| ++.|..+++=|--+.+-+..-+..+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKEL 179 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHHh
Confidence 45679999999999985433345789999999999 6889888888877777666666554
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.14 E-value=2 Score=54.39 Aligned_cols=46 Identities=22% Similarity=0.342 Sum_probs=35.7
Q ss_pred eEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 735 NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 735 ~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
-.+-.+....-|+..++.+.+. ...-+++|||+.||..|++.|+-+
T Consensus 771 sViCCR~sPlQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~AhVG 816 (1151)
T KOG0206|consen 771 SVICCRVSPLQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAHVG 816 (1151)
T ss_pred EEEEccCCHHHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCCcC
Confidence 4555666667799999998443 245799999999999999988743
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=89.12 E-value=2.2 Score=42.51 Aligned_cols=45 Identities=13% Similarity=0.249 Sum_probs=29.9
Q ss_pred eEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcc
Q 045882 735 NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 735 ~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
.++||.|. +|-.=.+.|.+.. |++++.++.|=|...-.+--+.+|
T Consensus 100 ~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lG 144 (169)
T PF12689_consen 100 DYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLG 144 (169)
T ss_dssp CEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT
T ss_pred chhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecC
Confidence 46899886 9999999999988 999999999987643333333343
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.04 E-value=0.57 Score=48.80 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=24.1
Q ss_pred CCCcceEEEEeCChhhHHHHHHcccc
Q 045882 761 GKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 761 gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
|..|+++++|.|+.+.+..-+++|..
T Consensus 156 gv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 156 GVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred CCChHHeEEEecchhHHHHHHHCCCE
Confidence 88999999999999999999999864
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.76 E-value=1.2 Score=47.70 Aligned_cols=69 Identities=14% Similarity=0.096 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhhCCCC-cceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------------------
Q 045882 746 KGLVAEKVLSTMISDGKL-PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------------------ 806 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~-~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------------------ 806 (832)
+-..+...++.+ |+. ++++++|||+.+|+.+-+.+|.. +++|+-|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHH
Confidence 345677778888 885 69999999999999999999853 355655532
Q ss_pred -----------ccccceEeCChhHHHHHHHHhh
Q 045882 807 -----------PSKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 807 -----------~s~A~y~l~~~~eV~~~L~~l~ 828 (832)
...|.+.+++..++..+|+.+.
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~ 258 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIE 258 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHH
Confidence 2458899999999888876543
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=88.09 E-value=0.64 Score=48.48 Aligned_cols=67 Identities=15% Similarity=0.060 Sum_probs=46.1
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEeCChhHHHHHHH
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYLDDEEDVLALLK 825 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~~~~eV~~~L~ 825 (832)
.....+++.+ |++++++++|||+.+|+..=+.+|.. .+++|+.+.. ...|...+++.+++.++|+
T Consensus 153 ~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (224)
T PRK14988 153 RLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRLIP 219 (224)
T ss_pred HHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHHhh
Confidence 3456667777 89999999999999998888888753 1234455443 2334445567777777777
Q ss_pred Hh
Q 045882 826 GL 827 (832)
Q Consensus 826 ~l 827 (832)
.|
T Consensus 220 ~l 221 (224)
T PRK14988 220 SL 221 (224)
T ss_pred hh
Confidence 65
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=87.18 E-value=0.58 Score=49.08 Aligned_cols=79 Identities=24% Similarity=0.293 Sum_probs=53.7
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEE-eC----------Ccc
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACT-VG----------QKP 807 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~-vG----------~~~ 807 (832)
-.|.+.-||..++.+++.....|...+.|+++||+.||.-.-..++.. . ++++ -| ...
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~---------D--~v~~R~~~~l~~~i~~~~~~ 212 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPR---------D--VVFPRKGYPLHKLIQKNPGE 212 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCC---------C--EEecCCCChHHHHHhcCCCc
Confidence 346778999999999987555578899999999999998665554431 0 1111 11 112
Q ss_pred cccceEe-CChhHHHHHHHHhh
Q 045882 808 SKARYYL-DDEEDVLALLKGLA 828 (832)
Q Consensus 808 s~A~y~l-~~~~eV~~~L~~l~ 828 (832)
-+|+-+. .+-.|+.+.|++|+
T Consensus 213 ~~a~v~~W~~g~~i~~~l~~~i 234 (234)
T PF06888_consen 213 VKAEVVPWSSGEEILEILLQLI 234 (234)
T ss_pred ceeEEEecCCHHHHHHHHHhhC
Confidence 3455443 67788888888763
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=87.18 E-value=0.65 Score=47.74 Aligned_cols=37 Identities=11% Similarity=-0.019 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
+.+.+.+.|+.+ ++. ..++|+||-....+.++++.++
T Consensus 69 l~pga~ell~~l-k~~-~~~~IVS~~~~~~~~~il~~lg 105 (203)
T TIGR02137 69 PLEGAVEFVDWL-RER-FQVVILSDTFYEFSQPLMRQLG 105 (203)
T ss_pred CCccHHHHHHHH-HhC-CeEEEEeCChHHHHHHHHHHcC
Confidence 456777888888 444 4999999999999988887765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=86.86 E-value=49 Score=37.28 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=46.6
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccc----cccC-
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGC----SPSL- 488 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----s~~l- 488 (832)
.+.+.+++. +++..||++| .+-|+ -+..|+++++.| +|+--+.+- +..+
T Consensus 291 ~~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~GvP-------------------~v~~P~~~dQ~~~a~~~~ 344 (401)
T cd03784 291 RVVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAGVP-------------------QLVVPFFGDQPFWAARVA 344 (401)
T ss_pred EEeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcCCC-------------------EEeeCCCCCcHHHHHHHH
Confidence 445567655 4578899998 45665 566899999664 444444331 2222
Q ss_pred -CC-ceEeCCC--CHHHHHHHHHHHhc
Q 045882 489 -SG-AIRVNPW--DIDAVADALHDAIT 511 (832)
Q Consensus 489 -~~-a~~VnP~--d~~~~A~ai~~aL~ 511 (832)
.| |+.+++. +.+++++++.++|+
T Consensus 345 ~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 345 ELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 13 5555554 68999999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.82 E-value=6 Score=47.98 Aligned_cols=57 Identities=11% Similarity=0.136 Sum_probs=45.6
Q ss_pred HhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 573 AYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 573 ~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
.|......|.|+-+=|-+= .|-+++.++++.+ ++.|+.|..+||-.......+-+++
T Consensus 565 ~~~~~E~~LtFvGlVGi~D-------PPR~ev~~ai~~c-~~aGIrV~mITGD~~~TA~AI~r~i 621 (972)
T KOG0202|consen 565 NRATAESDLTFVGLVGILD-------PPRPEVADAIELC-RQAGIRVIMITGDNKETAEAIAREI 621 (972)
T ss_pred cccccccceEEEEEeeccC-------CCchhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHHh
Confidence 3444556888988777543 4678999999887 7899999999999999998887765
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=86.65 E-value=1.7 Score=46.09 Aligned_cols=65 Identities=17% Similarity=0.159 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhhhhCCCC-cceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------------------
Q 045882 746 KGLVAEKVLSTMISDGKL-PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------------------ 806 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~-~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------------------ 806 (832)
+-......++.+ |+. ++++++|||+.+|+.+=+.+|.. +++|.-|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 345667777777 885 89999999999999999999863 356665532
Q ss_pred -----------ccccceEeCChhHHHHHH
Q 045882 807 -----------PSKARYYLDDEEDVLALL 824 (832)
Q Consensus 807 -----------~s~A~y~l~~~~eV~~~L 824 (832)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 235788899888876654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=86.60 E-value=0.71 Score=44.67 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
+......+++++ |+++ .+++|||+.+|+.+=+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 346677888888 8888 9999999999998877654
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=86.14 E-value=1.1 Score=45.54 Aligned_cols=60 Identities=15% Similarity=0.122 Sum_probs=43.9
Q ss_pred ccCcEEEEEecCCCcCCCCCCCCC----CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 576 RTSRRAIFLDYDGTVVPHHALIKK----PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~~~----~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+.++|++++|+|+||+...+.... .-|.+.+.|+.+. + ...|+|=|..+...+...+..+
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~-~-~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAY-E-DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHH-h-CCEEEEEecCCHHHHHHHHHHh
Confidence 356799999999999974321211 2367788888885 3 7899999999888887766643
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=84.82 E-value=0.56 Score=45.90 Aligned_cols=56 Identities=20% Similarity=0.174 Sum_probs=38.1
Q ss_pred EEEEEecCCCcCCCCCCCCC----------------CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 580 RAIFLDYDGTVVPHHALIKK----------------PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~~----------------~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
|++++|+||||+........ +-|.+.+.|+.+. +...++|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~--~~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELS--KHYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHH--HHCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHH--HhceEEEEEeehhhhhhHHHHhh
Confidence 68999999999974321110 2367778888884 36899999999998888777654
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.09 E-value=1.1 Score=44.95 Aligned_cols=46 Identities=26% Similarity=0.369 Sum_probs=34.9
Q ss_pred cEEEEEecCCCcCCCCC-CC-----CCCCHHHHHHHHHhhccCCCeEEEEcCC
Q 045882 579 RRAIFLDYDGTVVPHHA-LI-----KKPSRDVIYVLRELCGDSNNTTFIVSGR 625 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~-~~-----~~~s~~~~~~L~~L~~d~g~~V~I~SGR 625 (832)
.++||+|-||||--..+ .. -..-+.++.+|.+| ++.|..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l-~~~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKL-QRAGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHH-HhCCCeEEEEECC
Confidence 68999999999986322 11 12357889999999 6889999999853
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=83.80 E-value=1.1 Score=42.60 Aligned_cols=68 Identities=18% Similarity=0.146 Sum_probs=40.9
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHH-----HHHHhCCEEeecChhhHHHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEIL-----KALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il-----~~ll~~dligf~t~~~~~~Fl~ 271 (832)
.|+|++|+++..++..+++++. ++++.+.+|..+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~~-~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRRR-GIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHHH-T--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHcc-CCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 3999999998887887777444 7999999997543221 12222222 4466789999988877777654
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=83.48 E-value=0.92 Score=46.00 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChh
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKV 628 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 628 (832)
|-+.+.++|++| .+.|..++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 456788999999 4778888888888754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=83.20 E-value=2.8 Score=43.64 Aligned_cols=15 Identities=33% Similarity=0.647 Sum_probs=13.3
Q ss_pred CcEEEEEecCCCcCC
Q 045882 578 SRRAIFLDYDGTVVP 592 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~ 592 (832)
+.|+|+||+||||++
T Consensus 9 ~~k~vIFDlDGTL~d 23 (224)
T PRK14988 9 DVDTVLLDMDGTLLD 23 (224)
T ss_pred cCCEEEEcCCCCccc
Confidence 357999999999998
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=83.20 E-value=10 Score=42.85 Aligned_cols=97 Identities=15% Similarity=0.083 Sum_probs=56.9
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc----C-
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS----L- 488 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~----l- 488 (832)
.+.+.+++. .++..||++|.. -|.| +..|+++++.+ +|+.-..+-.+. +
T Consensus 278 ~~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G~P-------------------~v~~p~~~dq~~~a~~l~ 331 (392)
T TIGR01426 278 EVRQWVPQL---EILKKADAFITH---GGMN-STMEALFNGVP-------------------MVAVPQGADQPMTARRIA 331 (392)
T ss_pred EEeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhCCC-------------------EEecCCcccHHHHHHHHH
Confidence 345667764 567899988854 4665 56899999654 444333322211 2
Q ss_pred --CCceEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcC-CHHHHHH
Q 045882 489 --SGAIRVNP--WDIDAVADALHDAITMSDVEKQLRHEKHYRYICSH-DVAYWAH 538 (832)
Q Consensus 489 --~~a~~VnP--~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~-~~~~W~~ 538 (832)
.-|+.++. .+.++++++|.++|..+ +.+++.+++.+.+... .....++
T Consensus 332 ~~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 332 ELGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred HCCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 12555553 46789999999999743 3444445555544443 3344443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=82.32 E-value=2.2 Score=41.88 Aligned_cols=61 Identities=15% Similarity=0.060 Sum_probs=45.8
Q ss_pred ccCcEEEEEecCCCcCCCCCCC------C--------------------------CCCHHHHHHHHHhhccCCCeEEEEc
Q 045882 576 RTSRRAIFLDYDGTVVPHHALI------K--------------------------KPSRDVIYVLRELCGDSNNTTFIVS 623 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~------~--------------------------~~s~~~~~~L~~L~~d~g~~V~I~S 623 (832)
+.++..+++|+|.||+...... . .+-|.+.+.|++|+ ++..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~--~~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEAS--KLYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHH--hhcEEEEEe
Confidence 4678899999999999733210 0 01257788999994 469999999
Q ss_pred CCChhhHHHHhcCCC
Q 045882 624 GRGKVSLGEWLAPCE 638 (832)
Q Consensus 624 GR~~~~l~~~~~~l~ 638 (832)
..+...+...+..+.
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999998888887664
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=82.26 E-value=2.1 Score=42.31 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=37.9
Q ss_pred cEEEEEecCCCcCCCCCCCC---------------------CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 579 RRAIFLDYDGTVVPHHALIK---------------------KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~---------------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
++.+++|+|+||+....... ..-|.+.+.|..|. + ...++|.|.-+...+...+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~-~-~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVS-K-WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHH-h-cCEEEEEcCCcHHHHHHHHHHH
Confidence 46899999999997322110 01245677777773 3 3778888877777777766654
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=81.26 E-value=2.3 Score=42.35 Aligned_cols=38 Identities=18% Similarity=0.145 Sum_probs=28.3
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+-|.+|+..+..+.+ +++.++++||+.+|++.-+....
T Consensus 143 ~fG~dK~~vI~~l~e-------~~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 143 QFGHDKSSVIHELSE-------PNESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred ccCCCcchhHHHhhc-------CCceEEEecCCcccccHhhhhhh
Confidence 457788888888754 35668999999999876665544
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.24 E-value=0.79 Score=45.92 Aligned_cols=38 Identities=11% Similarity=0.001 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+-......++.+ |.+++++++|||+.+|+..=+.+|.
T Consensus 143 P~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 143 PAPDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 4556788888888 9999999999999999999999885
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.95 E-value=1.9 Score=44.18 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=41.3
Q ss_pred HHHHHHHhhhhCCCC-cceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--cccccceEeCChhHHHH
Q 045882 749 VAEKVLSTMISDGKL-PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KPSKARYYLDDEEDVLA 822 (832)
Q Consensus 749 al~~Ll~~l~~~gi~-~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~s~A~y~l~~~~eV~~ 822 (832)
|.++.++.. |+. |.++++|-||.+-+.-=+.+|.. +|-||. +.-.+.|.+.+..+..+
T Consensus 165 afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d~~l~~ih~~k~ 225 (244)
T KOG3109|consen 165 AFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLK-------------TVLVGREHKIKGVDYALEQIHNNKE 225 (244)
T ss_pred HHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccce-------------eEEEEeeecccchHHHHHHhhchhh
Confidence 566666666 888 99999999999999888888763 566664 44566676654444433
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.84 E-value=0.13 Score=62.08 Aligned_cols=218 Identities=21% Similarity=0.201 Sum_probs=108.3
Q ss_pred cCcccC--CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhc---cCCCeEEEEcCCChhh----
Q 045882 559 IGFGLS--LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCG---DSNNTTFIVSGRGKVS---- 629 (832)
Q Consensus 559 ~~~~~~--l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~---d~g~~V~I~SGR~~~~---- 629 (832)
||+.+. +....+-...-..+.-|.++|+||||-.+ ...+....++.-.+++. ++...-.++|||++..
T Consensus 167 ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~---t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~ 243 (732)
T KOG1050|consen 167 IGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFH---TDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKA 243 (732)
T ss_pred EEEeccCCCChHHHHHhcccHHHHHHhhhccCccccc---cccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeee
Confidence 444442 44444444433445568899999999984 34444333333322221 2222356699999765
Q ss_pred ------HHHHhcCCCCceEEEeCCEEEEeCC-CccEEEcCcccch-----hHHHHHHHHHHHHHhcCC------------
Q 045882 630 ------LGEWLAPCENLGIAAEHGYYLRWTK-KSEWETSTVAADF-----EWKRITEPVMKLYTEATD------------ 685 (832)
Q Consensus 630 ------l~~~~~~l~~l~liaenGa~i~~~~-~~~w~~~~~~~~~-----~w~~~v~~i~~~~~e~~~------------ 685 (832)
+.++.+ +.+++.++++|..+..+. +.......+..|. .+....++.++.|-+-.+
T Consensus 244 ~pigid~~r~v~-~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~ 322 (732)
T KOG1050|consen 244 LPIGIDVQRFVK-LLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKR 322 (732)
T ss_pred cccccchHHhhc-cccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCc
Confidence 444443 346778888888887654 2222222222221 233344444444433211
Q ss_pred --ceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCC-EEEEEcCeEEEEEeC-CCCHHHHHHHHHHhhhhCC
Q 045882 686 --GSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEP-VVVKRGYNIVEVKPQ-GVTKGLVAEKVLSTMISDG 761 (832)
Q Consensus 686 --gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~-~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~g 761 (832)
|.-+++-..++..|++..+..++...+.-+ ..+....+ .....+....|+.|. .+.||.++..+.......+
T Consensus 323 ~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV----~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 323 TDGKEVEELKFCVSVHVRRINEKFGSASYQPV----HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred ccchHHHHHHHHhHhhhhhhhhccCCcccceE----EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 111111223333344433333332110000 00000000 112334456788886 7899999988877664333
Q ss_pred --CCcceEEEEeCChhhHHHHHHcc
Q 045882 762 --KLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 762 --i~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
-..=...++||+.+|++-+..+.
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvn 423 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVN 423 (732)
T ss_pred cCCceEEeeeccccccccccCEEEC
Confidence 22234678999999977666554
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=80.66 E-value=4.5 Score=43.67 Aligned_cols=93 Identities=12% Similarity=0.118 Sum_probs=57.6
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
.+++++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.+++ +++.++. .+ .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~~----l~~~~~~----~~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLDE----LKKFAKE----YP-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHHH----HHHHHHh----CC-----CE
Confidence 367999999999988666777777653 23332 333433321 22333 3333322 11 24
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecC
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQG 456 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 456 (832)
.++. ..+++..+++.||++|.. -|.+.+|+++++.|
T Consensus 227 ~~~~---~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P 262 (279)
T TIGR03590 227 ILFI---DVENMAELMNEADLAIGA-----AGSTSWERCCLGLP 262 (279)
T ss_pred EEEe---CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCCC
Confidence 3332 256899999999998874 35899999999664
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=80.38 E-value=2.1 Score=44.14 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=27.8
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
|-.|-..++.. + |.+.+...+-|||.||.+||+.+++.
T Consensus 161 g~~K~~~l~~~---~---~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 161 GHEKVAQLERK---I---GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred ChHHHHHHHHH---h---CCCcceEEEecCCcccHHHHHhCCCC
Confidence 44555444443 3 44667788999999999999999874
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.35 E-value=3.1 Score=50.65 Aligned_cols=90 Identities=26% Similarity=0.330 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHhcCCCEEEEEcCe----------------EEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh
Q 045882 711 QAKELLDHLESVLANEPVVVKRGYN----------------IVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR 774 (832)
Q Consensus 711 ~a~el~~~l~~~l~~~~~~v~~g~~----------------~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ 774 (832)
.+++..+.|++. +..+...+|++ +-|+.|. +|...++.+.+. | ..|+++||+.
T Consensus 541 ~a~~aI~~L~~~--Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellPe--dK~~~V~~l~~~----g---~~VamVGDGI 609 (713)
T COG2217 541 DAKEAIAALKAL--GIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPE--DKAEIVRELQAE----G---RKVAMVGDGI 609 (713)
T ss_pred hHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHcChHhheccCCcH--HHHHHHHHHHhc----C---CEEEEEeCCc
Confidence 466777776552 12244556653 3466666 598888888643 3 5799999999
Q ss_pred hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHHH
Q 045882 775 SDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 775 ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L~ 825 (832)
||-+.|..++ +++++|.. ...|+..+ +|...|.++++
T Consensus 610 NDAPALA~Ad--------------VGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 610 NDAPALAAAD--------------VGIAMGSGTDVAIEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred hhHHHHhhcC--------------eeEeecCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 9999999997 57888863 56788877 56777766654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 832 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 2e-50 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 2e-50 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 9e-49 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 2e-13 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 3e-13 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 6e-12 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 832 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 0.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 0.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 2e-67 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 2e-06 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 2e-05 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 9e-05 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 2e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 2e-04 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 4e-04 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 601 bits (1552), Expect = 0.0
Identities = 129/494 (26%), Positives = 223/494 (45%), Gaps = 36/494 (7%)
Query: 62 IIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEE 121
++V+N + + +G L G + G + E +
Sbjct: 5 VVVSNRIAPPDEHAASAG----------GLAVGILGALKAAGGLWFGWSGETGN--EDQP 52
Query: 122 VAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYV 181
+ + LS ++Y+ F LWP FHY L + +F R W Y+
Sbjct: 53 LKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDGYL 107
Query: 182 SANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT 241
N + ADK++ ++ + D +WIHDYHL+ LR+R ++GFFLH PFP+ EI+
Sbjct: 108 RVNALLADKLLPLLQDD-DIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNA 166
Query: 242 LPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKI 301
LP + +L+ L + DL+GF T + FL C S + + S + + +G+ ++
Sbjct: 167 LPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRTEV 223
Query: 302 LHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLK 361
+GI + P K+ +++ + K + I V+ +D KG+ + LA E LL+
Sbjct: 224 YPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLE 282
Query: 362 VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPL 421
+P+ GK+ QI +R + QD + + RIN YG G+ P+ +++
Sbjct: 283 KYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDR 342
Query: 422 HEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF 481
+ ++ +V +RDGMNL+ +Y + +LV+S+F
Sbjct: 343 KLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPA--------------NPGVLVLSQF 388
Query: 482 IGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541
G + L+ A+ VNP+D D VA AL A+TMS E+ RH + I +D+ +W F+
Sbjct: 389 AGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFI 448
Query: 542 QDLERACRDHYSKR 555
DL++ +
Sbjct: 449 SDLKQIVPRSAESQ 462
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 557 bits (1438), Expect = 0.0
Identities = 88/505 (17%), Positives = 172/505 (34%), Gaps = 40/505 (7%)
Query: 62 IIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDT---SE 118
+ + + + +G + + ++ ++ S + D +
Sbjct: 6 FLASKRAAITYDTDPATGEPRAW-LAPGGTGNVVAEQAGVLNISWIASADSEDDRRASAL 64
Query: 119 QEEVAQKLLDEFNCVPTFLSS---DLQKKFYHGFCKQYLWPLFHYMLPICPDYGF-RFDR 174
+ L + L + + + +W +Y F R
Sbjct: 65 NPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSDAR 124
Query: 175 LLWRAYVSANKVFADKIMEVINPEE-DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPF 233
W + + FAD I++ +HDY L+ +P LR + + F+H P+
Sbjct: 125 EGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPW 184
Query: 234 PSSEIYRTLP--VRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLE 291
PS++ +R LP +R IL +L A IGF + R+FL + +L D R + +E
Sbjct: 185 PSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDREAMTVE 243
Query: 292 YFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISL 351
+ G ++ + +G L+ + I E G +++V D K
Sbjct: 244 WRGHRTRLRTMPLGYSPLTLDGRNPQ-----LPEGIEEWADGHRLVVHSGRTDPIKNAER 298
Query: 352 KLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEP 411
+ A +L K ++ +NP R D T N G
Sbjct: 299 AVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELG----SD 352
Query: 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCP 471
+ ID ++ A + A+ I N+ DG NL ++ + +
Sbjct: 353 TVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNE---------------- 396
Query: 472 RTSMLVISEFIGCSPSLSGAIR-VNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS 530
R + +++SE G + L R VNP+D+ A+A+ A+ ++ +
Sbjct: 397 RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARP 456
Query: 531 HDVAYWAHSFMQDLERACRDHYSKR 555
+ W + + L +
Sbjct: 457 WTLEAWVQAQLDGLAADHAARTATA 481
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 223 bits (569), Expect = 2e-67
Identities = 48/254 (18%), Positives = 90/254 (35%), Gaps = 31/254 (12%)
Query: 581 AIFLDYDGTVVPHHALI--KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638
IFLDYDGT+VP ++ ++ +L T+IV+GR + +L
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL--KERFDTYIVTGRSPEEISRFLPLD- 59
Query: 639 NLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVW 698
+ + HG + + + + + + G I +K A+++
Sbjct: 60 -INMICYHGACSKINGQIVYNNGS-DRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 117
Query: 699 HYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMI 758
H +L +E + V G I+E++ GV KG V
Sbjct: 118 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGE-- 171
Query: 759 SDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEE 818
+ GDD +DE FE+ + VG+ + A++++ D
Sbjct: 172 ------RPAIIAGDDATDEAAFEAN------------DDALTIKVGEGETHAKFHVADYI 213
Query: 819 DVLALLKGLAAASK 832
++ +LK +
Sbjct: 214 EMRKILKFIEMLGV 227
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.0 bits (173), Expect = 1e-12
Identities = 93/625 (14%), Positives = 171/625 (27%), Gaps = 172/625 (27%)
Query: 112 VDVDTSEQEEVAQKLL--------DEFNC--VPTFLSSDLQKKFYHGFCKQYLWPLFHYM 161
+D +T E + + +L D F+C V S L K+
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS--------- 57
Query: 162 LPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHD-YHLMVL-PTFLRRR 219
D RL W ++ + EV+ +Y ++ P+ + R
Sbjct: 58 ----KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI--NYKFLMSPIKTEQRQPSMMTRM 111
Query: 220 F--HRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLN---ADLIGFHTFDYARHFLSCCS 274
+ R +L + + F + R P ++ +ALL A +
Sbjct: 112 YIEQRDRL-YNDNQVFAKYNVSRLQPY-LKLRQALLELRPAKNVLIDG------------ 157
Query: 275 RMLG-----LDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIRE 329
+LG + + Y I+ +++ S P + + E+ +
Sbjct: 158 -VLGSGKTWVALDVCLSYKVQCKMDFKIF------WLNLKNCNS----PETVL---EMLQ 203
Query: 330 QFKGKKVIVGVDDMDIFKGISLKLLAMEQ----LLKVHPELQGKLVLVQIVNPARSTGKD 385
+ + D I L++ +++ LLK P LVL +
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-----------LN 252
Query: 386 VQDAK-LETYT------ITKR---INETYGVPGYEPVILIDRPVPLHEKTAYYALAECCI 435
VQ+AK + +T R + + + L + L L
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL---- 308
Query: 436 VNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVN 495
KY D E+ + P +S I S G +
Sbjct: 309 -------------KYL----DCRPQDLPREVLTTNP----RRLS-IIAESIR-DGLATWD 345
Query: 496 PWDIDAVADALHDAITMS-DVEKQLRHEKHYRY--ICSHDV--------AYWAHS----- 539
W D L I S +V + + K + + W
Sbjct: 346 NWK-HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404
Query: 540 --FMQDLERAC---RDHYSKRCW--GIGFGLSLSVD-------RIVDAYKRTSRRAIFLD 585
+ L + + I L + ++ IVD Y D
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT----FD 460
Query: 586 YDGTVVP-----------HHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKV--SLGE 632
D + P HH L + + + R + D F+ K+
Sbjct: 461 SDDLIPPYLDQYFYSHIGHH-LKNIEHPERMTLFRMVFLDFR---FL---EQKIRHDSTA 513
Query: 633 WLAPCENLGIAAEHGYYLRWTKKSE 657
W A L + +Y + ++
Sbjct: 514 WNASGSILNTLQQLKFYKPYICDND 538
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 3e-05
Identities = 52/295 (17%), Positives = 91/295 (30%), Gaps = 98/295 (33%)
Query: 19 YFPQTPRALPRAMT-----VQGVIPEA--DGNESNDENSDSPSYRHH---KKKIIVANFL 68
Y P+ LPR + +I E+ DG + D ++H K I+ + L
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN------WKHVNCDKLTTIIESSL 363
Query: 69 ----PLHAQKNLESGNWCFSFDDDSL----LLQM--KDGFSSDTDVF------------- 105
P +K + F + LL + D SD V
Sbjct: 364 NVLEPAEYRKMFDR---LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420
Query: 106 ------YVGSLKVDVDTSEQEEVA--QKLLDEFNCVPTFLSSDLQKKF----------YH 147
+ S+ +++ + E A + ++D +N TF S DL + +H
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480
Query: 148 -GFCKQY-LWPLFH--YMLPICPDYGF-----RFDRLLWRAYVSANKVFADKIMEVINPE 198
+ LF ++ D+ F R D W A S +
Sbjct: 481 LKNIEHPERMTLFRMVFL-----DFRFLEQKIRHDSTAWNASGSILNTLQQ-----LKFY 530
Query: 199 EDYVWIHD--YHLMV--LPTFLRRRFHRVKLGFFLHSPF----------PSSEIY 239
+ Y+ +D Y +V + FL + L + S + I+
Sbjct: 531 KPYICDNDPKYERLVNAILDFLPK--IEENL---ICSKYTDLLRIALMAEDEAIF 580
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 49.2 bits (116), Expect = 2e-06
Identities = 37/243 (15%), Positives = 76/243 (31%), Gaps = 38/243 (15%)
Query: 573 AYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGE 632
A +R R D DGT+ P +K +V L++L S +V G + E
Sbjct: 7 AARRKERVLCLFDVDGTLTPAR---QKIDPEVAAFLQKLR--SRVQIGVVGGSDYCKIAE 61
Query: 633 WLAPCENLGIAAEHGY-----------YLRWTKKSEWETSTVAADFEWKRITEPVMKLYT 681
L + + ++ + L + + + L
Sbjct: 62 QLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRL 121
Query: 682 EATDGSYIEKKETALVWHY-----------QDAAPGFGSCQAKELLDHLESVLANEPVVV 730
G++IE + L + + ++ ++ L++ A + +
Sbjct: 122 PKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRF 181
Query: 731 KR-GYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRS----DEDMFESISQ 785
R G +V P+G K + + D D + G++ S D ++F
Sbjct: 182 SRGGMISFDVFPEGWDKRYCLDSL------DQDSFDTIHFFGNETSPGGNDFEIFADPRT 235
Query: 786 ATY 788
+
Sbjct: 236 VGH 238
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 Length = 275 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 2e-05
Identities = 32/218 (14%), Positives = 71/218 (32%), Gaps = 22/218 (10%)
Query: 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC--EN 639
+F D DGT++ H+ +P+ + LRE +N + S + + +
Sbjct: 12 VFSDLDGTLLDSHSYDWQPAAPWLTRLRE----ANVPVILCSSKTSAEMLYLQKTLGLQG 67
Query: 640 LGIAAEHGYYLRWTKKSE-----WETSTVAADFEWKRITEPV-MKLYTEATDGSYIEKKE 693
L + AE+G ++ ++ + + + E + + K + + T ++
Sbjct: 68 LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDAT 127
Query: 694 TALVWHYQDAAPGFGS----------CQAKELLDHLESVLANEPVVVKRGYNIVEVKPQG 743
A + + E + + L + +G V
Sbjct: 128 IAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 187
Query: 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781
K A +++T L +GD +D + E
Sbjct: 188 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLE 225
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 9e-05
Identities = 31/239 (12%), Positives = 61/239 (25%), Gaps = 67/239 (28%)
Query: 578 SRRAIFLDYDGTVVPHH-------ALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSL 630
+ + D D T V + + +GR S
Sbjct: 2 RQLLLISDLDNTWVGDQQALEHLQEYLGDRRGNFYLA-------------YATGRSYHSA 48
Query: 631 GEWLAPCENLGIAAEHGY--------YLRWTKKSEWETSTVAADFEWKRITE-----PVM 677
E + +G+ + Y W ++ ++ + +
Sbjct: 49 RELQ---KQVGLMEPDYWLTAVGSEIYHPEGLDQHWAD-YLSEHWQRDILQAIADGFEAL 104
Query: 678 KLYTEATDG----SYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPV---VV 730
K + SY + ++D L +L + V+
Sbjct: 105 KPQSPLEQNPWKISYHLDPQ-----------------ACPTVIDQLTEMLKETGIPVQVI 147
Query: 731 KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYG 789
V++ PQ KG + + + P L GD +D +FE + G
Sbjct: 148 FSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFE---TSARG 200
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 2e-04
Identities = 31/207 (14%), Positives = 62/207 (29%), Gaps = 31/207 (14%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
R +D DG + + S I +R T ++SG +
Sbjct: 6 RLAAIDVDGNLTDRD---RLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALK---IF 58
Query: 640 LG----IAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETA 695
LG + E+G + ++ ++ + E + K + + A
Sbjct: 59 LGINGPVFGENGGIMF---DNDGSIKKFFSNEGTNKFLEEMSKRTSM--RSILTNRWREA 113
Query: 696 LVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLS 755
D E +D++ + V+ + +G K K+
Sbjct: 114 STGFDIDP----------EDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKE 163
Query: 756 TM-ISDGKLPDFVLCVGDDRSDEDMFE 781
+ D +L +GD +D MF+
Sbjct: 164 MYSLE----YDEILVIGDSNNDMPMFQ 186
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 2e-04
Identities = 45/207 (21%), Positives = 76/207 (36%), Gaps = 29/207 (14%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
+AI +D DGT+ + +I + + + I +V+G A
Sbjct: 4 KAISIDIDGTITYPNRMIHEKALEAIRRAES----LGIPIMLVTGNTVQFA---EAASIL 56
Query: 640 LG----IAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETA 695
+G + AE G + + KK + S D EW E + T + +++
Sbjct: 57 IGTSGPVVAEDGGAISYKKKRIFLASM---DEEWILWNEIRKRFPNARTSYTMPDRRAGL 113
Query: 696 LVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLS 755
++ +E+++ L L V V G+ I VK + KG EK
Sbjct: 114 VI-----MRETINVETVREIINELNLNL----VAVDSGFAI-HVKKPWINKGSGIEKASE 163
Query: 756 TM-ISDGKLPDFVLCVGDDRSDEDMFE 781
+ I P V VGD +D D F+
Sbjct: 164 FLGIK----PKEVAHVGDGENDLDAFK 186
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 46/278 (16%), Positives = 90/278 (32%), Gaps = 52/278 (18%)
Query: 169 GFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFF 228
+ + Y++ N+ + K +++ + DYV +HD L F ++ +
Sbjct: 100 SLKLTEEMKELYLNVNRENS-KFIDLSSF--DYVLVHDPQPAALIEFYEKK---SPWLWR 153
Query: 229 LHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYI 288
H L N L + ++ + + + +
Sbjct: 154 CHI---------DLSSPNREFWEFLR------RFVEKYDRYIFHLPEYVQPELDRNK--- 195
Query: 289 GLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDI 345
I+ I S N ++ I E+F K +I V D
Sbjct: 196 ----------AVIMPPSID---PLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDP 242
Query: 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG 405
+KGI + ++ + P +Q L+LV ++ G + L +I E Y
Sbjct: 243 WKGIFDVIEIYRKVKEKIPGVQ--LLLVGVMAHDDPEGWIYFEKTLR------KIGEDYD 294
Query: 406 VPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGM 443
V LI V E A+ ++ + ++R+G
Sbjct: 295 VKVL--TNLI--GVHAREVNAFQRASDVILQMSIREGF 328
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 832 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.96 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.95 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.94 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.93 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.93 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.93 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.93 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.92 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.92 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.92 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.92 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.92 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.92 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.91 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.91 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.91 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.9 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.89 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.89 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.89 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.89 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.89 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.89 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.89 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.88 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.88 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.88 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.88 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.88 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.88 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.87 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.87 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.87 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.86 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.86 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.86 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.85 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.81 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.8 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.79 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.77 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.73 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.66 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.65 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.64 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.64 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.61 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.6 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.5 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.48 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.44 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.38 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.36 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.36 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.35 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.34 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.33 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.29 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.25 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.23 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.22 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.17 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.16 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.16 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.15 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.09 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.09 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.09 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.07 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.06 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.06 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.03 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.99 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.96 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.95 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.92 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.9 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.82 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.82 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.81 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.79 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.78 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.75 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.74 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.74 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.73 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.7 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.7 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.7 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.69 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.68 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.65 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.64 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 98.63 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 98.62 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.62 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.62 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.61 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.6 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.6 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.59 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.59 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.58 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.57 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.56 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.55 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.55 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.52 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.51 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.5 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.5 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.49 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.47 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.45 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.44 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.43 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.42 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.4 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 98.39 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.38 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 98.38 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.36 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.33 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.3 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.29 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.27 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.23 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.22 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.21 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.2 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.16 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.13 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.1 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 98.09 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 98.08 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.07 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.01 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.98 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.93 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.84 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.8 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.78 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.76 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.75 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.72 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.67 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.66 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.64 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 97.5 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 97.45 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.44 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.38 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.31 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.11 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.04 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.04 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.03 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 96.09 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.02 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.02 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 96.96 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 96.88 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 96.84 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 96.8 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 96.72 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 96.68 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.57 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.5 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.49 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.47 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.05 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.64 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.52 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.47 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.31 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 95.16 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.15 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 94.95 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 94.88 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 94.4 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 94.18 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 94.17 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 93.66 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 93.1 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 93.08 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 92.19 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 92.06 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 91.99 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 91.9 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 91.31 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 90.93 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 90.37 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 90.09 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 90.0 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 89.75 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 89.05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 88.85 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 87.46 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 87.4 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 86.64 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 86.02 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 85.24 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 85.17 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 84.79 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 84.43 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 84.42 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 84.18 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 83.26 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 82.61 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 82.45 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 81.24 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 80.47 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 80.28 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-107 Score=928.18 Aligned_cols=457 Identities=18% Similarity=0.269 Sum_probs=406.6
Q ss_pred CCeEEEEEcCCCcceeecCCCCCe---EEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHH---------h
Q 045882 58 HKKKIIVANFLPLHAQKNLESGNW---CFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQ---------K 125 (832)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~---------~ 125 (832)
+.++||||||||+.+++++++|+| .++.++|||+++|.+.+ +++||||.+.+. +++.+.+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~---~~~~~~~~~~~~~~~~~ 74 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSED---DRRASALNPDGVTMELH 74 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHH---HHHHHHHCTTCEEEECT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc----CCEEEecCCCcc---chhhhhccccccccccc
Confidence 468999999999999987445776 67778899999997644 789999988542 2222221 1
Q ss_pred hccCeeEEEEecCHHHHHHHhhhccccccccccccCCCC--CCCCccccchHhHHHHHHHHHHHHHHHHHHhCC-CCCEE
Q 045882 126 LLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPI--CPDYGFRFDRLLWRAYVSANKVFADKIMEVINP-EEDYV 202 (832)
Q Consensus 126 ~~~~~~~~pv~l~~~~~~~~y~gf~~~~lwp~~H~~~~~--~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~-~~d~v 202 (832)
..++|+|+||+|+++++++||+||||++|||+|||+.+. .|+. .+|++++|++|++||++||++|++.+++ ++|+|
T Consensus 75 ~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 75 SGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp TSCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred cCCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 257899999999999999999999999999999998533 3332 3566789999999999999999999952 36999
Q ss_pred EEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCC--chHHHHHHHHhCCEEeecChhhHHHHHHHHHHHh-CC
Q 045882 203 WIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLP--VRNEILKALLNADLIGFHTFDYARHFLSCCSRML-GL 279 (832)
Q Consensus 203 wvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp--~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l-~~ 279 (832)
||||||||+||+|||+++|+++||||||||||++|+||+|| +|++||+|||+||+|||||++|++||++||+|++ |+
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 88
Q ss_pred cccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHH
Q 045882 280 DYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQL 359 (832)
Q Consensus 280 ~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~l 359 (832)
++....+ .+.++|++++|.++|+|||++.|.+... ++ .++++++++++++||+|||+|+.|||..+|+|| +|
T Consensus 234 ~~~~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~l 305 (496)
T 3t5t_A 234 RIDREAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VL 305 (496)
T ss_dssp EEETTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HH
T ss_pred cccccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HH
Confidence 8765544 6899999999999999999999986543 11 256788888999999999999999999999999 99
Q ss_pred HHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceeccc
Q 045882 360 LKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAV 439 (832)
Q Consensus 360 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~ 439 (832)
+++||+++ +++|||||.|+|+++++|+++++++++++++||.+||+. ||+|+. .++.+++.++|++|||||+||+
T Consensus 306 l~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~g-~v~~~el~aly~~ADv~vv~Sl 380 (496)
T 3t5t_A 306 AARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRIDN-DNDVNHTIACFRRADLLIFNST 380 (496)
T ss_dssp HHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEEE-CCCHHHHHHHHHHCSEEEECCS
T ss_pred HHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEeC-CCCHHHHHHHHHhccEEEECcc
Confidence 99999999 999999999999999999999999999999999999975 788764 7899999999999999999999
Q ss_pred ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHH
Q 045882 440 RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQ 518 (832)
Q Consensus 440 ~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~ 518 (832)
+||||||++|||||+. ++||+|+|+|+|++++| .+|++|||||++++|+||.+||+|+++||+
T Consensus 381 rEGfgLv~~EamA~~~----------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~ 444 (496)
T 3t5t_A 381 VDGQNLSTFEAPLVNE----------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRA 444 (496)
T ss_dssp SBSCCSHHHHHHHHCS----------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHH
T ss_pred cccCChhHHHHHHhCC----------------CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999953 36899999999999999 579999999999999999999999999999
Q ss_pred HHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 045882 519 LRHEKHYRYICSHDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 519 ~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (832)
+|+++++++|.+||+.+|+++|+++|..+...+
T Consensus 445 ~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~~ 477 (496)
T 3t5t_A 445 EAAARRRDAARPWTLEAWVQAQLDGLAADHAAR 477 (496)
T ss_dssp HHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHhhcccch
Confidence 999999999999999999999999999876543
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-92 Score=814.39 Aligned_cols=453 Identities=28% Similarity=0.521 Sum_probs=413.8
Q ss_pred CeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEecC
Q 045882 59 KKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFLS 138 (832)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 138 (832)
+|+||||||||+... + +.+.|||+++|.+.+. ..+++||||+|.. ++ +++.+...+.++|+|+||||+
T Consensus 2 ~~livvsnr~p~~~~-----~----~~~~ggl~~~l~~~~~-~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~ 69 (482)
T 1uqt_A 2 SRLVVVSNRIAPPDE-----H----AASAGGLAVGILGALK-AAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLS 69 (482)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCC-----C----CcCCCcHHHHHHHHHh-hCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECC
Confidence 589999999999721 1 3567899999987664 5799999999864 22 222233344578999999999
Q ss_pred HHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHh
Q 045882 139 SDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRR 218 (832)
Q Consensus 139 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~ 218 (832)
++++++||+||||++|||+|||+++. ..|+++.|.+|+++|+.||+++.+.+++ +|+|||||||++++|.++|+
T Consensus 70 ~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 70 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999875 4799999999999999999999999987 49999999999999999999
Q ss_pred hcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEE
Q 045882 219 RFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIY 298 (832)
Q Consensus 219 ~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~ 298 (832)
+.++++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|+++|+++|+++++.+...+ + .+.++|+.++
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~-~--~~~~~g~~~~ 220 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSA-K--SHTAWGKAFR 220 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETT-T--EEEETTEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccC-C--eEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876542 2 3788899999
Q ss_pred EEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecC
Q 045882 299 VKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNP 378 (832)
Q Consensus 299 i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (832)
|.++|+|||++.|.+....+++.+ ..+++++++++++|++|||+++.||+..+|+||++|++++|+++++++|||||.|
T Consensus 221 v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p 299 (482)
T 1uqt_A 221 TEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (482)
T ss_dssp EEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred EEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECC
Confidence 999999999999987655566655 6788999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCC
Q 045882 379 ARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTP 458 (832)
Q Consensus 379 ~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~ 458 (832)
+|+++++|+++++++++++++||.+||..+|.||+++.+.++++++.++|++|||||+||++||||||++|||||+.+
T Consensus 300 ~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~-- 377 (482)
T 1uqt_A 300 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (482)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred CccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 459 KMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
.++||||+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.+++++++++.++++.+|++
T Consensus 378 ------------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~ 445 (482)
T 1uqt_A 378 ------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQE 445 (482)
T ss_dssp ------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 24689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 045882 539 SFMQDLERA 547 (832)
Q Consensus 539 ~~l~~l~~~ 547 (832)
+|+++++++
T Consensus 446 ~~l~~l~~~ 454 (482)
T 1uqt_A 446 CFISDLKQI 454 (482)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 999999875
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=258.35 Aligned_cols=219 Identities=22% Similarity=0.330 Sum_probs=164.9
Q ss_pred cEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCc
Q 045882 579 RRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKS 656 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~ 656 (832)
.|+|++|+||||++... ..+.++++++++|++| +++| .|+|+|||+...+.+++..+ .++|++||+.++..+..
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l-~~~g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~~~~ 76 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KERF-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKINGQI 76 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HHHS-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEETTEE
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHH-hcCC-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeCCee
Confidence 37999999999998431 2457999999999999 4678 99999999999999999887 78999999999983322
Q ss_pred cEEEc-CcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCe
Q 045882 657 EWETS-TVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYN 735 (832)
Q Consensus 657 ~w~~~-~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~ 735 (832)
.|... .....++ .+.+..+++.+. +.++.+++.++..+.++|+..++ +.....+++.+.+.+. ..+.+.+++.
T Consensus 77 ~~~~~~~~~~~l~-~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~---~~~~~~~~~~ 150 (239)
T 1u02_A 77 VYNNGSDRFLGVF-DRIYEDTRSWVS-DFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI---FGVETYYGKM 150 (239)
T ss_dssp EECTTGGGGHHHH-HHHHHHHTTHHH-HSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH---HTCEEEECSS
T ss_pred eecccccccchhh-HHHHHHHHHHHh-hCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc---CCcEEEeCCc
Confidence 12100 1111111 234455555443 35677888888788888876532 2111233344444432 2345678899
Q ss_pred EEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHc--ccccCCCCCCCCCcEEEEEeCCcccccceE
Q 045882 736 IVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI--SQATYGSSLPIAPEIFACTVGQKPSKARYY 813 (832)
Q Consensus 736 ~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a--~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~ 813 (832)
++||+|+++|||.|+++|++++ | ++||||+.||++||+.+ + ++|+||++++.|+|+
T Consensus 151 ~lei~~~~~~Kg~al~~l~~~~---g-----via~GD~~ND~~Ml~~a~~g--------------~~vam~Na~~~A~~v 208 (239)
T 1u02_A 151 IIELRVPGVNKGSAIRSVRGER---P-----AIIAGDDATDEAAFEANDDA--------------LTIKVGEGETHAKFH 208 (239)
T ss_dssp EEEEECTTCCHHHHHHHHHTTS---C-----EEEEESSHHHHHHHHTTTTS--------------EEEEESSSCCCCSEE
T ss_pred EEEEEcCCCCHHHHHHHHHhhC---C-----eEEEeCCCccHHHHHHhhCC--------------cEEEECCCCCcceEE
Confidence 9999999999999999999988 6 99999999999999999 6 589999999999999
Q ss_pred eCC---hhHHHHHHHHhhh
Q 045882 814 LDD---EEDVLALLKGLAA 829 (832)
Q Consensus 814 l~~---~~eV~~~L~~l~~ 829 (832)
+.+ .++|.++|+++..
T Consensus 209 ~~~~~~~~gV~~~l~~~~~ 227 (239)
T 1u02_A 209 VADYIEMRKILKFIEMLGV 227 (239)
T ss_dssp ESSHHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHH
Confidence 988 8899999998764
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=247.46 Aligned_cols=229 Identities=20% Similarity=0.204 Sum_probs=162.3
Q ss_pred HHhhccCcEEEEEecCCCcCCCCCCCC-CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEE
Q 045882 572 DAYKRTSRRAIFLDYDGTVVPHHALIK-KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYY 649 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DGTLl~~~~~~~-~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~ 649 (832)
++|...+.|+|+||+||||++ ..+ .+++++.++|++| +++|+.|+++|||+...+.+++..++ ..++|+.||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRL-IDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 578899999999999999998 566 8999999999999 58899999999999999999988765 46899999999
Q ss_pred EEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCC----------ceEEeeccee----------EEEEe-cc---C--
Q 045882 650 LRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATD----------GSYIEKKETA----------LVWHY-QD---A-- 703 (832)
Q Consensus 650 i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~----------gs~ie~k~~~----------l~~~~-~~---a-- 703 (832)
++..+...+...++ .+.+.++++.+.+..+ +.+....... ..... .+ .
T Consensus 90 i~~~~~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 163 (283)
T 3dao_A 90 VRTPKEILKTYPMD------EDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDR 163 (283)
T ss_dssp EECSSCEEEECCCC------HHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCC
T ss_pred EEECCEEEEEecCC------HHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCc
Confidence 99865544544433 2445556655554311 1221110000 00000 00 0
Q ss_pred CCC-----C-CchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhH
Q 045882 704 APG-----F-GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDE 777 (832)
Q Consensus 704 d~~-----~-~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~ 777 (832)
.+. + ......++.+.+.+.+.+....+.++..++||+|+++|||.|++.+++++ |++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRF---DLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHH
Confidence 000 0 01122334445544454333446788999999999999999999999999 99999999999999999
Q ss_pred HHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHh
Q 045882 778 DMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGL 827 (832)
Q Consensus 778 ~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l 827 (832)
+||+.++ ++|+||++ +..|+|++.+ .++|.++|+++
T Consensus 241 ~ml~~ag--------------~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 241 EMLQNAG--------------ISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp HHHHHSS--------------EEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred HHHHhCC--------------CEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 9999998 46778875 5789999964 56799999876
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-26 Score=246.14 Aligned_cols=230 Identities=14% Similarity=0.164 Sum_probs=156.2
Q ss_pred HHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEE
Q 045882 571 VDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYY 649 (832)
Q Consensus 571 ~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~ 649 (832)
-.+|+..+.|+|+||+||||++ ..+.+++++.++|++| +++|+.|+|+|||+...+.+++..++ ..++|+.||+.
T Consensus 13 ~~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~ 88 (285)
T 3pgv_A 13 ENLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLL-TARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGAR 88 (285)
T ss_dssp --------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTE
T ss_pred ccccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeE
Confidence 3689999999999999999999 6788999999999999 68899999999999999999887765 36789999999
Q ss_pred EEeCCCcc-EEEcCcccchhHHHHHHHHHHHHHhcCCceE--EeecceeE--------EEE-------eccCCC----C-
Q 045882 650 LRWTKKSE-WETSTVAADFEWKRITEPVMKLYTEATDGSY--IEKKETAL--------VWH-------YQDAAP----G- 706 (832)
Q Consensus 650 i~~~~~~~-w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~--ie~k~~~l--------~~~-------~~~ad~----~- 706 (832)
++...+.. +...++ .+.+.++++.+.+. .+.. +......+ ... +...+. .
T Consensus 89 i~~~~~~~l~~~~l~------~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (285)
T 3pgv_A 89 VHDSDGQQIFAHNLD------RDIAADLFEIVRND-PKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQ 161 (285)
T ss_dssp EECTTSCEEEECCCC------HHHHHHHTTTTTTC-TTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCS
T ss_pred EECCCCCEEEecCCC------HHHHHHHHHHHhhc-CCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCC
Confidence 99654432 333322 34456665532221 1111 11111000 000 000000 0
Q ss_pred ---------CCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhH
Q 045882 707 ---------FGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDE 777 (832)
Q Consensus 707 ---------~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~ 777 (832)
.......++.+.+.+.+......+.++..++||.|+++|||.|++++++++ |++++++++|||+.||+
T Consensus 162 ~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~~~ia~GD~~NDi 238 (285)
T 3pgv_A 162 GISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKML---GYTLSDCIAFGDGMNDA 238 (285)
T ss_dssp SEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGH
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCcHhhH
Confidence 001123345555554443322235567899999999999999999999999 99999999999999999
Q ss_pred HHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccce--Ee--CChhHHHHHHHHhh
Q 045882 778 DMFESISQATYGSSLPIAPEIFACTVGQK----PSKARY--YL--DDEEDVLALLKGLA 828 (832)
Q Consensus 778 ~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y--~l--~~~~eV~~~L~~l~ 828 (832)
+||+.++ ++|+||++ +..|+| ++ ++.++|.++|+++.
T Consensus 239 ~ml~~ag--------------~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 239 EMLSMAG--------------KGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp HHHHHSS--------------EEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred HHHHhcC--------------CEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 9999998 47888885 466775 44 45788999999874
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=234.91 Aligned_cols=225 Identities=17% Similarity=0.159 Sum_probs=160.4
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC----CceEEEeCCEEEEeC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE----NLGIAAEHGYYLRWT 653 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----~l~liaenGa~i~~~ 653 (832)
+.|+|+||+||||++ ..+.+++++.++|+++ +++|+.|+++|||+...+.+++..++ ..++|++||+.++..
T Consensus 4 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 79 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTN---SKKEISSRNRETLIRI-QEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINW 79 (279)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEEC
Confidence 578999999999999 6789999999999999 57899999999999999999988775 368999999999975
Q ss_pred CCcc--EEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEE----------------EeccCC--------CCC
Q 045882 654 KKSE--WETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVW----------------HYQDAA--------PGF 707 (832)
Q Consensus 654 ~~~~--w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~----------------~~~~ad--------~~~ 707 (832)
.... +...++. +.+.++++.+.+..-...+...+..+.- .+...+ +..
T Consensus 80 ~~~~~~~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 4dw8_A 80 ESKEMMYENVLPN------EVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVA 153 (279)
T ss_dssp TTCCEEEECCCCG------GGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCS
T ss_pred CCCeEEEEecCCH------HHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCce
Confidence 3332 3323321 2355555555443111111111111000 000000 000
Q ss_pred ------CchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHH
Q 045882 708 ------GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781 (832)
Q Consensus 708 ------~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~ 781 (832)
......++.+.+.+.+...-..+.++..++||+|+++|||.|++.+++++ |++++++++|||+.||++||+
T Consensus 154 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~~ 230 (279)
T 4dw8_A 154 KCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENI---GMTREEVIAIGDGYNDLSMIK 230 (279)
T ss_dssp CEEEESCHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCChhhHHHHH
Confidence 01123445555555443333446678899999999999999999999999 999999999999999999999
Q ss_pred HcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhhh
Q 045882 782 SISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLAA 829 (832)
Q Consensus 782 ~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~ 829 (832)
.+| ++|+||++ +..|+|++++ .++|.++|+++..
T Consensus 231 ~ag--------------~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~ 270 (279)
T 4dw8_A 231 FAG--------------MGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFN 270 (279)
T ss_dssp HSS--------------EEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC-
T ss_pred HcC--------------cEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHh
Confidence 998 47888875 5679999864 6789999998764
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.2e-25 Score=237.21 Aligned_cols=227 Identities=15% Similarity=0.272 Sum_probs=163.3
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHH-HHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRD-VIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTK 654 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~-~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~ 654 (832)
...|+|+||+||||++ ..+.+++. +.++|++| +++|+.|+++|||+...+.+++..++ ..++|+.||+.+...+
T Consensus 35 M~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 110 (304)
T 3l7y_A 35 MSVKVIATDMDGTFLN---SKGSYDHNRFQRILKQL-QERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKN 110 (304)
T ss_dssp -CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETT
T ss_pred eeeEEEEEeCCCCCCC---CCCccCHHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECC
Confidence 3579999999999999 67888998 89999999 57899999999999999999988775 3789999999997655
Q ss_pred CccEEEcCcccchhHHHHHHHHHHHHHhcCCceE--EeecceeEEE----------------------EeccC-CCC---
Q 045882 655 KSEWETSTVAADFEWKRITEPVMKLYTEATDGSY--IEKKETALVW----------------------HYQDA-APG--- 706 (832)
Q Consensus 655 ~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~--ie~k~~~l~~----------------------~~~~a-d~~--- 706 (832)
...+...++ .+.+.++++.+.+..++.. +...+..... .+... ...
T Consensus 111 ~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~k 184 (304)
T 3l7y_A 111 QSLIEVFQQ------REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFK 184 (304)
T ss_dssp EEEEECCCC------HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEE
T ss_pred EEEEEecCC------HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEE
Confidence 444443332 3456666666655322211 1111110000 00000 000
Q ss_pred ----CCchhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHH
Q 045882 707 ----FGSCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781 (832)
Q Consensus 707 ----~~~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~ 781 (832)
.......++.+.+.+.+.+..+. +.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+
T Consensus 185 i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~e~i~~GDs~NDi~m~~ 261 (304)
T 3l7y_A 185 LTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRW---NFTSDHLMAFGDGGNDIEMLK 261 (304)
T ss_dssp EEEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHh---CcCHHHEEEECCCHHHHHHHH
Confidence 00123455666665444431244 4567889999999999999999999999 999999999999999999999
Q ss_pred HcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhhhh
Q 045882 782 SISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLAAA 830 (832)
Q Consensus 782 ~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~~ 830 (832)
.++ ++|+||++ +..|+|++++ .++|.++|+++...
T Consensus 262 ~ag--------------~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~ 302 (304)
T 3l7y_A 262 LAK--------------YSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS 302 (304)
T ss_dssp HCT--------------EEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC
T ss_pred hcC--------------CeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHHh
Confidence 998 47788875 5779999965 56699999998754
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=245.55 Aligned_cols=314 Identities=15% Similarity=0.146 Sum_probs=235.3
Q ss_pred HHHHHHHHHHHHHHHHHHh--CCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCCh---hhhhc--------CC
Q 045882 177 WRAYVSANKVFADKIMEVI--NPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS---EIYRT--------LP 243 (832)
Q Consensus 177 w~~Y~~vN~~fa~~v~~~~--~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~---e~~r~--------lp 243 (832)
+..+....+.....+...+ ....|+|++|+++..+++.++++. .++++.+.+|.+++.. ..+.. ..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 3444444444444444332 112399999999999888888754 5789999999987641 11111 11
Q ss_pred chHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHH
Q 045882 244 VRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIK 323 (832)
Q Consensus 244 ~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~ 323 (832)
........+-.+|.|.+.+..+++.... .++.. ..++.++|+|||.+.|.+....+.....
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~~---------------~~~i~vi~ngvd~~~~~~~~~~~~~~~~ 238 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRDER 238 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGGG---------------TTSEEECCCCCCTTTSCGGGSCSCHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhhc---------------CCceeecCCCCCchhcCcccccchhhhh
Confidence 1133445566899999999888776332 11111 1146779999999998765433344556
Q ss_pred HHHHHHHc--CCCEEEEEecccc-ccCCHHHHHHHHHHHHHhC--CCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHH
Q 045882 324 VKEIREQF--KGKKVIVGVDDMD-IFKGISLKLLAMEQLLKVH--PELQGKLVLVQIVNPARSTGKDVQDAKLETYTITK 398 (832)
Q Consensus 324 ~~~l~~~~--~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~ 398 (832)
...+++++ .++++|+++||+. +.||+..+++|++++.+++ |+++ |+.+|.+ + .++.++++++++
T Consensus 239 ~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~----l~i~G~g-----~--~~~~~~l~~~~~ 307 (439)
T 3fro_A 239 KKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FIIIGKG-----D--PELEGWARSLEE 307 (439)
T ss_dssp HHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEE----EEEECCC-----C--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeE----EEEEcCC-----C--hhHHHHHHHHHh
Confidence 67777777 3449999999999 9999999999999998866 6655 8888843 2 234456666666
Q ss_pred HHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEe
Q 045882 399 RINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVI 478 (832)
Q Consensus 399 ~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (832)
+.+ .++++.+.++.+++..+|+.||++|+||..||||++++||||| +.|+|+
T Consensus 308 ~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~-------------------G~Pvi~ 359 (439)
T 3fro_A 308 KHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------------------GAIPIA 359 (439)
T ss_dssp HCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHT-------------------TCEEEE
T ss_pred hcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHC-------------------CCCeEE
Confidence 543 3667788899999999999999999999999999999999999 457999
Q ss_pred ccCccccccC--CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHH
Q 045882 479 SEFIGCSPSL--SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACR 549 (832)
Q Consensus 479 Se~~G~s~~l--~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 549 (832)
|+.+|..+.+ ..|++++|.|++++|++|.++++++++.+....++.++++.+++...+++++++-++++.+
T Consensus 360 s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 360 SAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp ESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred cCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 9999999988 3589999999999999999999966677777778888888889999999999888776543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-24 Score=230.98 Aligned_cols=223 Identities=15% Similarity=0.156 Sum_probs=160.3
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCc-eEEEeCCEEEEeCCCc
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENL-GIAAEHGYYLRWTKKS 656 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l-~liaenGa~i~~~~~~ 656 (832)
+.|+|+||+||||++ ..+.+++.+.++|++| +++|+.|+++|||+...+..++..++.. ++|++||+.++...+.
T Consensus 5 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 80 (290)
T 3dnp_A 5 SKQLLALNIDGALLR---SNGKIHQATKDAIEYV-KKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDA 80 (290)
T ss_dssp -CCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTS
T ss_pred cceEEEEcCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCC
Confidence 478999999999999 6788999999999999 6789999999999999998888877643 8999999999864333
Q ss_pred -cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEE-------------------------eccC------C
Q 045882 657 -EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWH-------------------------YQDA------A 704 (832)
Q Consensus 657 -~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~-------------------------~~~a------d 704 (832)
.+...++ .+.+.++++.+.+......+.......... +... .
T Consensus 81 ~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (290)
T 3dnp_A 81 PFFEKRIS------DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDE 154 (290)
T ss_dssp CSEECCCC------HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHS
T ss_pred EEEecCCC------HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcC
Confidence 3333332 456777777776542222222111111000 0000 0
Q ss_pred CC--------CCchhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChh
Q 045882 705 PG--------FGSCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRS 775 (832)
Q Consensus 705 ~~--------~~~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~N 775 (832)
+. .......++.+.+..... .+. +.++..++||.|+++|||.|++.+++++ |++++++++|||+.|
T Consensus 155 ~~~~~ki~~~~~~~~~~~~~~~l~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~N 229 (290)
T 3dnp_A 155 PVSAPVIEVYTEHDIQHDITETITKAFP--AVDVIRVNDEKLNIVPKGVSKEAGLALVASEL---GLSMDDVVAIGHQYD 229 (290)
T ss_dssp CCCCSEEEEECCGGGHHHHHHHHHHHCT--TEEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGG
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHhhCC--cEEEEEeCCCeEEEEECCCCHHHHHHHHHHHc---CCCHHHEEEECCchh
Confidence 00 001123344444422222 233 4678899999999999999999999999 999999999999999
Q ss_pred hHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhhh
Q 045882 776 DEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLAA 829 (832)
Q Consensus 776 D~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~ 829 (832)
|++||+.+| ++|+||++ +..|+|++.+ .++|.++|+++..
T Consensus 230 Di~m~~~ag--------------~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~ 275 (290)
T 3dnp_A 230 DLPMIELAG--------------LGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFR 275 (290)
T ss_dssp GHHHHHHSS--------------EEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHH
T ss_pred hHHHHHhcC--------------CEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHH
Confidence 999999998 47888875 5779999864 5679999998764
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.9e-25 Score=231.74 Aligned_cols=222 Identities=17% Similarity=0.251 Sum_probs=157.8
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccE
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEW 658 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w 658 (832)
.|+|+||+||||++ ..+.+++.+.++|+++ +++|+.|+++|||+...+.+++..++..++|++||+.++..+...+
T Consensus 5 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 80 (274)
T 3fzq_A 5 YKLLILDIDGTLRD---EVYGIPESAKHAIRLC-QKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLY 80 (274)
T ss_dssp CCEEEECSBTTTBB---TTTBCCHHHHHHHHHH-HHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEE
T ss_pred ceEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEE
Confidence 68999999999999 6778999999999999 6889999999999999999998888766789999999987654445
Q ss_pred EEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEE----------------------Ee-----------cc--C
Q 045882 659 ETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVW----------------------HY-----------QD--A 703 (832)
Q Consensus 659 ~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~----------------------~~-----------~~--a 703 (832)
...++ .+.+.++++.+.+......+......... .. .. .
T Consensus 81 ~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T 3fzq_A 81 NQSFN------QRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKS 154 (274)
T ss_dssp ECCCC------HHHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSS
T ss_pred EcCCC------HHHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcc
Confidence 44433 34556666665543222222211111100 00 00 0
Q ss_pred CCCC--CchhHHHHHHHHHHHhcCCCEEEEEcC--eEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHH
Q 045882 704 APGF--GSCQAKELLDHLESVLANEPVVVKRGY--NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDM 779 (832)
Q Consensus 704 d~~~--~~~~a~el~~~l~~~l~~~~~~v~~g~--~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~M 779 (832)
.+-. ......+..+.+.+.+......+.++. .++||.|++++||.|++++++++ |++++++++|||+.||++|
T Consensus 155 ~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m 231 (274)
T 3fzq_A 155 QDIHKICLWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERL---GVTQKETICFGDGQNDIVM 231 (274)
T ss_dssp CCCCEEEEECCHHHHHHHHHHHGGGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHH---TCCSTTEEEECCSGGGHHH
T ss_pred cCeEEEEEEcCHHHHHHHHHHhhcceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCChhHHHH
Confidence 0000 000112233333333433212345566 89999999999999999999999 9999999999999999999
Q ss_pred HHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHh
Q 045882 780 FESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGL 827 (832)
Q Consensus 780 f~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l 827 (832)
|+.+| ++|+||++ +..|+|++++ .++|.++|+++
T Consensus 232 ~~~ag--------------~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 232 FQASD--------------VTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp HHTCS--------------EEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred HHhcC--------------ceEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 99998 46778875 5779999864 57899999886
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9e-24 Score=225.13 Aligned_cols=225 Identities=19% Similarity=0.272 Sum_probs=161.5
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHH-HHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDV-IYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~ 655 (832)
+.|+|++|+||||++ .++.+++++ .++|++| +++|+.|+|+|||+...+.+++..++ ..++|++||+.++..+.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 77 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGK 77 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTE
T ss_pred CccEEEEeCCCCCCC---CCCcCCHHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCe
Confidence 368999999999999 677899985 9999999 57899999999999999999887765 46899999999987544
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhcC---------CceEEeecce------------eEEE--EeccCCCC------
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEAT---------DGSYIEKKET------------ALVW--HYQDAAPG------ 706 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~~---------~gs~ie~k~~------------~l~~--~~~~ad~~------ 706 (832)
..+...++ .+.+.++++.+.+.. .+.+...... .+.. .+......
T Consensus 78 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i 151 (271)
T 1rlm_A 78 QLFHGELT------RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSL 151 (271)
T ss_dssp EEEECCCC------HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEE
T ss_pred EEEEecCC------HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEE
Confidence 34443332 355677777665432 1222211000 0000 00000000
Q ss_pred -CCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 707 -FGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 707 -~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.......++.+++.+.+...-..+.++..++||.|++++|+.+++++++++ |++++++++|||+.||++||+.++.
T Consensus 152 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l---~i~~~~~~~~GD~~nD~~m~~~ag~ 228 (271)
T 1rlm_A 152 NLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMARY 228 (271)
T ss_dssp ECCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE
T ss_pred EcCHHHHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHHcCC
Confidence 011234556666665454332334567889999999999999999999999 9999999999999999999999984
Q ss_pred ccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhhh
Q 045882 786 ATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLAA 829 (832)
Q Consensus 786 ~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~ 829 (832)
+|+||+. +..|+|++.+ .++|.++|+++..
T Consensus 229 --------------~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~ 264 (271)
T 1rlm_A 229 --------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLD 264 (271)
T ss_dssp --------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred --------------eEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHh
Confidence 6778875 4579999865 4679999998764
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=226.83 Aligned_cols=222 Identities=18% Similarity=0.176 Sum_probs=153.8
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEE-EeCCCc
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYL-RWTKKS 656 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i-~~~~~~ 656 (832)
..|+|+||+||||++. ..+.+++++.++|+++ +++|+.|+++|||+...+ +.+..++..++|++||+.+ +..+..
T Consensus 11 miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nGa~i~~~~~~~ 86 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKV-HDSGIKIVIATGRAASDL-HEIDAVPYDGVIALNGAECVLRDGSV 86 (268)
T ss_dssp CCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHH-HHTTCEEEEECSSCTTCC-GGGTTSCCCEEEEGGGTEEEETTSCE
T ss_pred ceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHh-HHHHhcCCCcEEEeCCcEEEEcCCeE
Confidence 4799999999999982 2568999999999999 578999999999999888 5666776678999999999 876544
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEe--------cc--C-CCCCCch---------------
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHY--------QD--A-APGFGSC--------------- 710 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~--------~~--a-d~~~~~~--------------- 710 (832)
.+...++ .+.+.++++.+.+..-...+...+....... +. . .+.....
T Consensus 87 ~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (268)
T 3r4c_A 87 IRKVAIP------AQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFY 160 (268)
T ss_dssp EEECCCC------HHHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEE
T ss_pred EEEecCC------HHHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEe
Confidence 4443333 3456666666544322222222221111000 00 0 0000000
Q ss_pred hHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCC
Q 045882 711 QAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGS 790 (832)
Q Consensus 711 ~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~ 790 (832)
...+....+...+.. -..+.++..++||.|+++|||.|++.+++++ |++++++++|||+.||++||+.+|
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GD~~NDi~m~~~ag------ 230 (268)
T 3r4c_A 161 FDEEAEQKVMPLLSG-LSATRWHPLFADVNVAGTSKATGLSLFADYY---RVKVSEIMACGDGGNDIPMLKAAG------ 230 (268)
T ss_dssp CCHHHHHHHGGGCTT-EEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSS------
T ss_pred cChHHHHHHHHhCCC-cEEEEecCCeEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCcHHhHHHHHhCC------
Confidence 001111111111111 1234577899999999999999999999999 999999999999999999999998
Q ss_pred CCCCCCcEEEEEeCCc----ccccceEeC--ChhHHHHHHHHh
Q 045882 791 SLPIAPEIFACTVGQK----PSKARYYLD--DEEDVLALLKGL 827 (832)
Q Consensus 791 ~~~~~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L~~l 827 (832)
++|+||++ +..|+|++. +.++|.++|+++
T Consensus 231 --------~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 231 --------IGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp --------EEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred --------CeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 47888875 567999985 567899999986
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=226.02 Aligned_cols=222 Identities=16% Similarity=0.156 Sum_probs=154.2
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCcc
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSE 657 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~ 657 (832)
+.|+|+||+||||++ .++.+++.+.++|+++ ++.|+.|+++|||+...+.+++..++..++|+.||+++...+...
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i 77 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLD---EQKQLPLSTIEAVRRL-KQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVL 77 (258)
T ss_dssp CCCEEEECTBTTTBC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEE
T ss_pred CceEEEEeCCCCCcC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEE
Confidence 358999999999999 6678999999999999 688999999999999998888876654458999999998755433
Q ss_pred EEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEE----------------EeccCCCCC-------C--chhH
Q 045882 658 WETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVW----------------HYQDAAPGF-------G--SCQA 712 (832)
Q Consensus 658 w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~----------------~~~~ad~~~-------~--~~~a 712 (832)
+...++ .+.+.++++.+.+..-...+......... .+....+.+ . ....
T Consensus 78 ~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 151 (258)
T 2pq0_A 78 YKQPLR------REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCR 151 (258)
T ss_dssp EECCCC------HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSC
T ss_pred EEecCC------HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECC
Confidence 443333 35566777666543111111111110000 000000000 0 0000
Q ss_pred HHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCC
Q 045882 713 KELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSS 791 (832)
Q Consensus 713 ~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~ 791 (832)
.+....+.+.+. .+. +.+++.++||.|+++|||.|++.+++++ |++++++++|||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~~~--~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GDs~NDi~ml~~ag~------ 220 (258)
T 2pq0_A 152 AEEEEPYVRNYP--EFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKL---GIDKKDVYAFGDGLNDIEMLSFVGT------ 220 (258)
T ss_dssp HHHHHHHHHHCT--TEEEEEEETTEEEEEESSCCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHHHSSE------
T ss_pred HHHHHHHHHhCC--CeEEEEeCCceEEEEECCCChHHHHHHHHHHh---CCCHHHEEEECCcHHhHHHHHhCCc------
Confidence 112222332232 233 4567889999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhh
Q 045882 792 LPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLA 828 (832)
Q Consensus 792 ~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~ 828 (832)
+|+||++ +..|+|++++ .++|.++|+++.
T Consensus 221 --------~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~~ 255 (258)
T 2pq0_A 221 --------GVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ 255 (258)
T ss_dssp --------EEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred --------EEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence 6677874 4679999854 578999998764
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-24 Score=230.86 Aligned_cols=225 Identities=18% Similarity=0.171 Sum_probs=157.7
Q ss_pred CcEEEEEecCCCcCCCCCC-CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHh--cCCC-C----ceEEEeCCEE
Q 045882 578 SRRAIFLDYDGTVVPHHAL-IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWL--APCE-N----LGIAAEHGYY 649 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~-~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~--~~l~-~----l~liaenGa~ 649 (832)
..|+|++|+||||++ . ++.++++++++|++| +++|+.|+|+|||+...+..++ ..++ . .++|++||+.
T Consensus 26 ~ikli~~DlDGTLl~---~~~~~is~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~ 101 (301)
T 2b30_A 26 DIKLLLIDFDGTLFV---DKDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTI 101 (301)
T ss_dssp CCCEEEEETBTTTBC---CTTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTE
T ss_pred cccEEEEECCCCCcC---CCCCccCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeE
Confidence 579999999999999 6 788999999999999 5789999999999999999888 6554 2 4799999999
Q ss_pred EEeC-CCccEEEcCcccchhHHHHHHHHHHHHHhcCC-ceEEe-ecceeEE-----------------EEeccC-----C
Q 045882 650 LRWT-KKSEWETSTVAADFEWKRITEPVMKLYTEATD-GSYIE-KKETALV-----------------WHYQDA-----A 704 (832)
Q Consensus 650 i~~~-~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~-gs~ie-~k~~~l~-----------------~~~~~a-----d 704 (832)
++.. +...+...++ .+.+.++++.+.+..- ...+. ..+..+. ++++.. +
T Consensus 102 i~~~~~~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (301)
T 2b30_A 102 VYDQIGYTLLDETIE------TDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLK 175 (301)
T ss_dssp EECTTCCEEEECCCC------HHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTT
T ss_pred EEeCCCCEEEEccCC------HHHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhc
Confidence 9974 3333443333 2445555554443211 11111 1111100 001100 0
Q ss_pred --CCC------CchhHHHHHHHHHHHhcCCCEEE-EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChh
Q 045882 705 --PGF------GSCQAKELLDHLESVLANEPVVV-KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRS 775 (832)
Q Consensus 705 --~~~------~~~~a~el~~~l~~~l~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~N 775 (832)
+.. ......++.+.+.+.+. ..+.+ .++..++||.|++++||.|++.+++.+ |++++++++|||+.|
T Consensus 176 ~~~i~ki~~~~~~~~~~~~~~~l~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~n 251 (301)
T 2b30_A 176 YRTMNKLMIVLDPSESKTVIGNLKQKFK-NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVGDAEN 251 (301)
T ss_dssp CCCCSEEEECCCTTTHHHHHHHHHHHST-TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGG
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHHhc-CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHc---CCCHHHEEEECCCHH
Confidence 000 01123455555554342 23554 457789999999999999999999999 999999999999999
Q ss_pred hHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeC-C--hhHHHHHHHHhhhh
Q 045882 776 DEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLD-D--EEDVLALLKGLAAA 830 (832)
Q Consensus 776 D~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~-~--~~eV~~~L~~l~~~ 830 (832)
|++||+.++ ++|+||+. +..|+|+++ + .++|.++|+++...
T Consensus 252 D~~m~~~ag--------------~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~ 299 (301)
T 2b30_A 252 DIAMLSNFK--------------YSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 299 (301)
T ss_dssp GHHHHHSCS--------------EEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHcC--------------CeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence 999999997 46778874 357999887 5 56899999988653
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-24 Score=228.01 Aligned_cols=223 Identities=15% Similarity=0.185 Sum_probs=153.3
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC----ceEEEeCCEEEEeC-
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN----LGIAAEHGYYLRWT- 653 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~----l~liaenGa~i~~~- 653 (832)
.|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||+...+.+++..++. .++|++||+.++..
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l-~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~ 80 (282)
T 1rkq_A 5 IKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAA 80 (282)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETT
T ss_pred ceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECC
Confidence 68999999999999 6788999999999999 688999999999999999998877653 26999999999984
Q ss_pred -CCccEEEcCcccchhHHHHHHHHHHHHHhc--------CCceEEeecc---e--------eEEEEe---ccCC--CCC-
Q 045882 654 -KKSEWETSTVAADFEWKRITEPVMKLYTEA--------TDGSYIEKKE---T--------ALVWHY---QDAA--PGF- 707 (832)
Q Consensus 654 -~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~--------~~gs~ie~k~---~--------~l~~~~---~~ad--~~~- 707 (832)
+...+...++ .+.+.++++.+.+. ..+.+...+. . .+.... .... ...
T Consensus 81 ~~~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 1rkq_A 81 DGSTVAQTALS------YDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFL 154 (282)
T ss_dssp TCCEEEECCBC------HHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBC
T ss_pred CCeEEEEecCC------HHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCce
Confidence 3333444333 23444555444332 1122222110 0 000000 0000 000
Q ss_pred -----C-chhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHH
Q 045882 708 -----G-SCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMF 780 (832)
Q Consensus 708 -----~-~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf 780 (832)
. .....++.+.+.+.+.. .+. +.++..++||.|++++|+.+++++++.+ |++++++++|||+.||++||
T Consensus 155 ki~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~ 230 (282)
T 1rkq_A 155 KVMMIDEPAILDQAIARIPQEVKE-KYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMI 230 (282)
T ss_dssp EEEEECCHHHHHHHHHHSCHHHHH-HEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHHhcC-CEEEEEeCCceEEecCCCCCCHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHH
Confidence 0 01122233332222211 233 3477889999999999999999999999 99999999999999999999
Q ss_pred HHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhhh
Q 045882 781 ESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLAA 829 (832)
Q Consensus 781 ~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~ 829 (832)
+.++ ++|+||+. +..|+|++++ .++|.++|+++..
T Consensus 231 ~~ag--------------~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~ 271 (282)
T 1rkq_A 231 EYAG--------------VGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVL 271 (282)
T ss_dssp HHSS--------------EEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTT
T ss_pred HHCC--------------cEEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHh
Confidence 9998 46778774 3578999865 5779999998753
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=231.03 Aligned_cols=224 Identities=15% Similarity=0.143 Sum_probs=135.0
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC----ceEEEeCCEEEEe-
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN----LGIAAEHGYYLRW- 652 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~----l~liaenGa~i~~- 652 (832)
+.|+|+||+||||++ ..+.+++++.++|++| +++|+.|+++|||+...+.+++..++. .++|++||+ ++.
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~~ 78 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLN---EKNELAQATIDAVQAA-KAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQT 78 (279)
T ss_dssp -CCEEEECC--------------CHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEEE
T ss_pred ceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEEC
Confidence 478999999999999 6788999999999999 678999999999999999998887642 379999999 553
Q ss_pred CCCcc-EEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEE-------------------EEecc---C--CCCC
Q 045882 653 TKKSE-WETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALV-------------------WHYQD---A--APGF 707 (832)
Q Consensus 653 ~~~~~-w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~-------------------~~~~~---a--d~~~ 707 (832)
..+.. +...++ .+.+.++++.+.+..-...+...+.... ..+.. . ....
T Consensus 79 ~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (279)
T 3mpo_A 79 ISGKVLTNHSLT------YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTI 152 (279)
T ss_dssp TTSCEEEECCCC------HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCC
T ss_pred CCCCEEEecCCC------HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCc
Confidence 33332 222222 3456666666654321211211111100 00000 0 0000
Q ss_pred -------CchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHH
Q 045882 708 -------GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMF 780 (832)
Q Consensus 708 -------~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf 780 (832)
......++.+.+...+.+.-..+.++..++||+|+++|||.|++.+++++ |++++++++|||+.||++||
T Consensus 153 ~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~ 229 (279)
T 3mpo_A 153 SKAMFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQL---GLTADDVMTLGDQGNDLTMI 229 (279)
T ss_dssp CEEEEECCHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHT---TCCGGGEEEC--CCTTHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCchhhHHHH
Confidence 00112233333332222211234578899999999999999999999999 99999999999999999999
Q ss_pred HHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeC--ChhHHHHHHHHhhh
Q 045882 781 ESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLD--DEEDVLALLKGLAA 829 (832)
Q Consensus 781 ~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L~~l~~ 829 (832)
+.+|. +|+||++ +..|+|++. +.++|.++|+++..
T Consensus 230 ~~ag~--------------~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~ 270 (279)
T 3mpo_A 230 KYAGL--------------GVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYAL 270 (279)
T ss_dssp HHSTE--------------ECBC---CCHHHHHCSCBC------CHHHHHC----
T ss_pred HhcCc--------------eeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhc
Confidence 99984 5666664 577899885 56789999988753
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-24 Score=227.09 Aligned_cols=221 Identities=16% Similarity=0.205 Sum_probs=141.6
Q ss_pred HHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC-----CCceEEEe
Q 045882 571 VDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC-----ENLGIAAE 645 (832)
Q Consensus 571 ~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-----~~l~liae 645 (832)
..+|+..++|+|++|+||||++ .++.++++++++|++| +++ +.|+|+|||+...+.+.++.. ...++|++
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~---~~~~is~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~ 79 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSR-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAE 79 (262)
T ss_dssp --------CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEG
T ss_pred cccccccCeEEEEEeCccCCCC---CCCcCCHHHHHHHHHH-HhC-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEEC
Confidence 3577888899999999999999 6788999999999999 677 999999999999998888641 13579999
Q ss_pred CCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhc--------CCceEEeecceeEEEE-e-ccCCCC----CCch-
Q 045882 646 HGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEA--------TDGSYIEKKETALVWH-Y-QDAAPG----FGSC- 710 (832)
Q Consensus 646 nGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~--------~~gs~ie~k~~~l~~~-~-~~ad~~----~~~~- 710 (832)
||+.++..++..|...++. .. ..+.+.++++.+.+. .++.+++.+...+.+. + +..+.. +...
T Consensus 80 NGa~i~~~~~~i~~~~~~~-~l-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (262)
T 2fue_A 80 NGTVQYKHGRLLSKQTIQN-HL-GEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELD 157 (262)
T ss_dssp GGTEEEETTEECCCCCHHH-HH-CHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHH
T ss_pred CCcEEEeCCeEEEEeeccc-cC-CHHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEEc
Confidence 9999988543333322100 00 134455555443321 2344444332222111 0 111000 0000
Q ss_pred ----hHHHHHHHHHHHhcCCCEEEE-EcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHH
Q 045882 711 ----QAKELLDHLESVLANEPVVVK-RGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFE 781 (832)
Q Consensus 711 ----~a~el~~~l~~~l~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~ 781 (832)
...++.+.+.+.+.+..+.+. ++..++||.|+++|||.|+++| + |+++++|+|||| +.||++||+
T Consensus 158 ~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~---gi~~~~viafGDs~~~~~NDi~Ml~ 231 (262)
T 2fue_A 158 KKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---D---QDSFDTIHFFGNETSPGGNDFEIFA 231 (262)
T ss_dssp HHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---T---TSCCSEEEEEESCCSTTSTTHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---H---CCCHHHEEEECCCCCCCCCCHHHHh
Confidence 012233344443433245554 4678999999999999999999 5 999999999999 999999999
Q ss_pred HcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCCh
Q 045882 782 SISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDE 817 (832)
Q Consensus 782 ~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~ 817 (832)
.++. .+++||++ +..|+|++++.
T Consensus 232 ~~~~-------------~g~av~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 232 DPRT-------------VGHSVVSPQDTVQRCREIFFPET 258 (262)
T ss_dssp STTS-------------EEEECSSHHHHHHHHHHHHCTTC
T ss_pred cCcc-------------CcEEecCCCHHHHHhhheeCCCC
Confidence 9874 36677874 56677777543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=9.5e-24 Score=225.69 Aligned_cols=226 Identities=15% Similarity=0.097 Sum_probs=134.5
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC--ceEEEeCCEEEEeCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN--LGIAAEHGYYLRWTK 654 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~--l~liaenGa~i~~~~ 654 (832)
.+.|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||+...+.+++..++. .++|++||+.++...
T Consensus 7 m~~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~ 82 (275)
T 1xvi_A 7 QQPLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAE 82 (275)
T ss_dssp CCCEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCT
T ss_pred cCceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecC
Confidence 3579999999999998 4556777899999999 678999999999999999999987753 269999999998332
Q ss_pred -Cc------cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeeccee-------EEEEecc--C--CCCCC----chhH
Q 045882 655 -KS------EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETA-------LVWHYQD--A--APGFG----SCQA 712 (832)
Q Consensus 655 -~~------~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~-------l~~~~~~--a--d~~~~----~~~a 712 (832)
.. .+...++ .+.+.++++.+.+.....+....... ..+.+.. . ..++. ....
T Consensus 83 ~~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (275)
T 1xvi_A 83 QWQEIDGFPRIISGIS------HGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDS 156 (275)
T ss_dssp TCTTSTTTTEEECSSC------HHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSC
T ss_pred cccccCceEEEecCCC------HHHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCC
Confidence 11 2443333 24455555544332111111000000 0000000 0 00000 0001
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCC-CCcce--EEEEeCChhhHHHHHHcccccCC
Q 045882 713 KELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDG-KLPDF--VLCVGDDRSDEDMFESISQATYG 789 (832)
Q Consensus 713 ~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g-i~~d~--vl~~GDd~ND~~Mf~~a~~~~~~ 789 (832)
.+..+.+.+.+....+.+.++..++||.|++++||.|++++++++ | +++++ +++|||+.||++||+.++.
T Consensus 157 ~~~~~~~~~~l~~~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~---~~~~~~~~~~~~~GD~~nD~~m~~~ag~---- 229 (275)
T 1xvi_A 157 DERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATY---QQLSGKRPTTLGLGDGPNDAPLLEVMDY---- 229 (275)
T ss_dssp HHHHHHHHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHH---HHHHSSCCEEEEEESSGGGHHHHHTSSE----
T ss_pred HHHHHHHHHHHHhhCeEEEECCceEEEecCCCCHHHHHHHHHHHh---hhcccccCcEEEECCChhhHHHHHhCCc----
Confidence 122333333333335666677889999999999999999999999 8 88899 9999999999999999984
Q ss_pred CCCCCCCcEEEEEeCCcc----c-----ccc-eEeC--ChhHHHHHHHHhhh
Q 045882 790 SSLPIAPEIFACTVGQKP----S-----KAR-YYLD--DEEDVLALLKGLAA 829 (832)
Q Consensus 790 ~~~~~~~~~f~v~vG~~~----s-----~A~-y~l~--~~~eV~~~L~~l~~ 829 (832)
+|+||+.. . .|+ |+++ +.++|+++|+++..
T Consensus 230 ----------~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~~l~ 271 (275)
T 1xvi_A 230 ----------AVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFS 271 (275)
T ss_dssp ----------EEECCCCC----------------------------------
T ss_pred ----------eEEecCCCccchhhccccCCceeEccCCCchHHHHHHHHHHH
Confidence 56666531 1 267 7774 56789999988754
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-23 Score=219.26 Aligned_cols=223 Identities=17% Similarity=0.134 Sum_probs=154.0
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC-c-eEEEeCCEEEEeC-CC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN-L-GIAAEHGYYLRWT-KK 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~-l-~liaenGa~i~~~-~~ 655 (832)
.|+|++|+||||++ .++.+++++.++|++ +++|+.|+|+|||+...+.+++..++. . ++|++||+.++.. +.
T Consensus 2 ikli~~DlDGTLl~---~~~~i~~~~~~al~~--~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~ 76 (268)
T 1nf2_A 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEK--LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG 76 (268)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHH--HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred ccEEEEeCCCcCCC---CCCccCHHHHHHHHH--HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCC
Confidence 47999999999999 678899999999999 478999999999999999998877653 2 6999999999884 32
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhcC--------CceEEeecce---------eEEEE-eccCC-----CCC-----
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEAT--------DGSYIEKKET---------ALVWH-YQDAA-----PGF----- 707 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~~--------~gs~ie~k~~---------~l~~~-~~~ad-----~~~----- 707 (832)
..+...++ .+.+.++++.+.+.. .+.+...+.. .+... +...+ ...
T Consensus 77 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~ 150 (268)
T 1nf2_A 77 VILNEKIP------PEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLL 150 (268)
T ss_dssp EEEECCBC------HHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEE
T ss_pred EEEecCCC------HHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEE
Confidence 22332322 344566666554421 1222211100 00000 00000 000
Q ss_pred --CchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 708 --GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 708 --~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
......++.+.+.+.+...-..+.++..++||.|++++||.+++.+++++ |++++++++|||+.||++|++.++.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~ag~ 227 (268)
T 1nf2_A 151 IDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAGL 227 (268)
T ss_dssp ECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCSE
T ss_pred ECCHHHHHHHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHHcCC
Confidence 00112334444444343222234577889999999999999999999999 9999999999999999999999984
Q ss_pred ccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhhh
Q 045882 786 ATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLAA 829 (832)
Q Consensus 786 ~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~ 829 (832)
++++|+. +..|+|++++ .++|.++|+++.+
T Consensus 228 --------------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~~ 263 (268)
T 1nf2_A 228 --------------RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST 263 (268)
T ss_dssp --------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCB
T ss_pred --------------EEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHHH
Confidence 6778874 3568999865 6789999987654
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.3e-24 Score=222.13 Aligned_cols=209 Identities=15% Similarity=0.162 Sum_probs=137.7
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC-C--CCceEEEeCCEEEEeC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP-C--ENLGIAAEHGYYLRWT 653 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-l--~~l~liaenGa~i~~~ 653 (832)
.++|+|++|+||||++ .++.++++++++|++| +++ +.|+|+|||+...+.+.++. + ...++|++||+.++..
T Consensus 4 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~ 78 (246)
T 2amy_A 4 PGPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQK-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD 78 (246)
T ss_dssp CCSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred CCceEEEEECCCCcCC---CCcccCHHHHHHHHHH-HhC-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeC
Confidence 5789999999999999 6788999999999999 577 99999999999888887762 2 1247899999999985
Q ss_pred CCccEEEcCcc-cchhHHHHHHHHHHHHHhc--------CCceEEeecceeEEEEe--ccCCC----CCCch-----hHH
Q 045882 654 KKSEWETSTVA-ADFEWKRITEPVMKLYTEA--------TDGSYIEKKETALVWHY--QDAAP----GFGSC-----QAK 713 (832)
Q Consensus 654 ~~~~w~~~~~~-~~~~w~~~v~~i~~~~~e~--------~~gs~ie~k~~~l~~~~--~~ad~----~~~~~-----~a~ 713 (832)
++..|...++. .+ .+.+..+++.+.+. ..+.+.+.+...+.+.. +.... .+... ...
T Consensus 79 ~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (246)
T 2amy_A 79 GKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQ 155 (246)
T ss_dssp TEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHH
T ss_pred CcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHH
Confidence 54445433210 01 23445554443221 23445443322222211 10100 00000 012
Q ss_pred HHHHHHHHHhcCCCEEEE-EcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHHcccccC
Q 045882 714 ELLDHLESVLANEPVVVK-RGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFESISQATY 788 (832)
Q Consensus 714 el~~~l~~~l~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~a~~~~~ 788 (832)
++.+.+.+.+....+.+. ++..++||.|+++|||.|+++| + |+++++|+|||| +.||++||+.++.
T Consensus 156 ~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~---~i~~~~viafGD~~~~~~ND~~Ml~~a~~--- 226 (246)
T 2amy_A 156 KFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---E---NDGYKTIYFFGDKTMPGGNDHEIFTDPRT--- 226 (246)
T ss_dssp HHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---T---TSCCSEEEEEECSCC---CCCHHHHCTTE---
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---h---CCCHHHEEEECCCCCCCCCcHHHHHhCCc---
Confidence 233344443433345554 5788999999999999999999 5 999999999999 9999999999875
Q ss_pred CCCCCCCCcEEEEEeCCc----ccccce
Q 045882 789 GSSLPIAPEIFACTVGQK----PSKARY 812 (832)
Q Consensus 789 ~~~~~~~~~~f~v~vG~~----~s~A~y 812 (832)
.+++||++ +..|+|
T Consensus 227 ----------ag~av~Na~~~vk~~A~~ 244 (246)
T 2amy_A 227 ----------MGYSVTAPEDTRRICELL 244 (246)
T ss_dssp ----------EEEECSSHHHHHHHHHHH
T ss_pred ----------ceEEeeCCCHHHHHHHhh
Confidence 37888885 344554
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-23 Score=216.00 Aligned_cols=216 Identities=15% Similarity=0.123 Sum_probs=147.3
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC---CCceEEEeCCEEEEeCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC---ENLGIAAEHGYYLRWTK 654 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l---~~l~liaenGa~i~~~~ 654 (832)
++|+|++|+||||++ .++.+++++.++|++| +++|+.|+|+|||++..+.+.++.- ...++|++||+.++..+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~ 78 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTP---PRLCQTDEMRALIKRA-RGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNG 78 (246)
T ss_dssp CSEEEEECSBTTTBS---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETT
T ss_pred CceEEEEeCcCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECC
Confidence 579999999999999 6788999999999999 6789999999999999998888731 13579999999999876
Q ss_pred CccEEEcCc-ccchhHHHHHHHHHHHHH-----hcCCceEEeecceeEEEEe--ccCCC----CCCchh-----HHHHHH
Q 045882 655 KSEWETSTV-AADFEWKRITEPVMKLYT-----EATDGSYIEKKETALVWHY--QDAAP----GFGSCQ-----AKELLD 717 (832)
Q Consensus 655 ~~~w~~~~~-~~~~~w~~~v~~i~~~~~-----e~~~gs~ie~k~~~l~~~~--~~ad~----~~~~~~-----a~el~~ 717 (832)
+..|...++ ..+.++...+...++.+. ....+.|++.+...+.+.. +.... .+.... ..++.+
T Consensus 79 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (246)
T 3f9r_A 79 LEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIA 158 (246)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHH
Confidence 555654432 011121222222222221 1234677776655444321 11100 000000 123444
Q ss_pred HHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCC----hhhHHHHHHcccccCCCCC
Q 045882 718 HLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDD----RSDEDMFESISQATYGSSL 792 (832)
Q Consensus 718 ~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd----~ND~~Mf~~a~~~~~~~~~ 792 (832)
.+.+.+.+..+. +.+++.++||+|+++|||.|+++|++ ++++++||||+ .||++||+.++.
T Consensus 159 ~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~-------~~~ev~afGD~~~~g~NDi~Ml~~a~~------- 224 (246)
T 3f9r_A 159 ELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED-------DFEEIHFFGDKTQEGGNDYEIYTDKRT------- 224 (246)
T ss_dssp HHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT-------TCSEEEEEESCCSTTSTTHHHHTCTTS-------
T ss_pred HHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc-------CcccEEEEeCCCCCCCCCHHHHhCCCc-------
Confidence 455444444344 67899999999999999999999976 68999999996 999999998763
Q ss_pred CCCCcEEEEEeCCcccccceEeCChhHHHHHHHHhh
Q 045882 793 PIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 793 ~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~~l~ 828 (832)
.+++|| +..++++.|+.|+
T Consensus 225 ------~g~~v~-----------n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 225 ------IGHKVT-----------SYKDTIAEVEKII 243 (246)
T ss_dssp ------EEEECS-----------SHHHHHHHHHHHH
T ss_pred ------cEEEeC-----------CHHHHHHHHHHHh
Confidence 355664 4667777777766
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=236.45 Aligned_cols=294 Identities=14% Similarity=0.109 Sum_probs=196.7
Q ss_pred CCEEEEeCcccccHHHHHHhhc------CCCeEEEEecCCC-----CChhhhh-cCCc--------------------hH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRF------HRVKLGFFLHSPF-----PSSEIYR-TLPV--------------------RN 246 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~------~~~~ig~flH~Pf-----P~~e~~r-~lp~--------------------r~ 246 (832)
+||+++||+|..++|.+++... .++++.|++|..- |....-. .+|. -.
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 3789999999999999998765 3689999999642 1111100 0111 01
Q ss_pred HHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCC--------C
Q 045882 247 EILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNH--------P 318 (832)
Q Consensus 247 ~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~--------~ 318 (832)
-+-.++..||.|-.-++.|++..++. .+... .+....+..+|.++|+|||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~----~~~g~-------~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISG----IARGC-------ELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTT----CCCCS-------SSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcc----ccccc-------ccccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 34457889999998888888766531 11000 01112234468889999999988753210 0
Q ss_pred C----hHHHHHHHHHHc-----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHH
Q 045882 319 S----SSIKVKEIREQF-----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDA 389 (832)
Q Consensus 319 ~----~~~~~~~l~~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l 389 (832)
. .......+++++ ++.++|++|||+++.||+..+++|+.+++++++ + |+.+|.+ +.. .
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~--~----l~l~G~G---~~~----~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV--Q----IVLLGTG---KKK----F 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC--E----EEEECCB---CHH----H
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC--e----EEEEecc---Cch----H
Confidence 0 112233455554 367899999999999999999999999976543 2 5556532 222 2
Q ss_pred HHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcC
Q 045882 390 KLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASV 469 (832)
Q Consensus 390 ~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~ 469 (832)
...+..+..+.+. .+.+ .+..+.+++..+|+.||+||+||.+||||++++|||+|
T Consensus 370 ~~~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~---------------- 424 (536)
T 3vue_A 370 EKLLKSMEEKYPG--------KVRA-VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRY---------------- 424 (536)
T ss_dssp HHHHHHHHHHSTT--------TEEE-ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHT----------------
T ss_pred HHHHHHHHhhcCC--------ceEE-EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHc----------------
Confidence 2333334333322 2444 34678999999999999999999999999999999999
Q ss_pred CCCCceEEeccCccccccCC---Cc----------eEeCCCCHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhhhcCCHHH
Q 045882 470 CPRTSMLVISEFIGCSPSLS---GA----------IRVNPWDIDAVADALHDAITMS-DVEKQLRHEKHYRYICSHDVAY 535 (832)
Q Consensus 470 ~~~~g~lV~Se~~G~s~~l~---~a----------~~VnP~d~~~~A~ai~~aL~m~-~~e~~~r~~~~~~~v~~~~~~~ 535 (832)
+.|+|+|+.+|+.+.+. +| ++|+|.|++++|+||.+||..- .++.++..++. .-.++++..
T Consensus 425 ---G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~ 499 (536)
T 3vue_A 425 ---GTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKG 499 (536)
T ss_dssp ---TCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHH
T ss_pred ---CCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHH
Confidence 45799999999999883 24 4889999999999999998632 22222222221 124577777
Q ss_pred HHHHHHHHHHH
Q 045882 536 WAHSFMQDLER 546 (832)
Q Consensus 536 W~~~~l~~l~~ 546 (832)
-|+++++-..+
T Consensus 500 ~A~~y~~ly~~ 510 (536)
T 3vue_A 500 PAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 77777665543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-22 Score=214.39 Aligned_cols=222 Identities=16% Similarity=0.178 Sum_probs=153.5
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeC-CCc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWT-KKS 656 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~-~~~ 656 (832)
.|+|+||+||||++ .++.+++.++++|++| ++.|+.|+++|||+...+.+++..++ ..++|++||+.++.. +..
T Consensus 4 ikli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 79 (288)
T 1nrw_A 4 MKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 79 (288)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred eEEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcE
Confidence 58999999999999 6788999999999999 67899999999999999999988765 345999999999874 333
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhcC--------CceEEeecc------e---e----------------------EE
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEAT--------DGSYIEKKE------T---A----------------------LV 697 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~~--------~gs~ie~k~------~---~----------------------l~ 697 (832)
.+...++ .+.+.++++.+.+.. .+.+..... . . ..
T Consensus 80 ~~~~~~~------~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (288)
T 1nrw_A 80 YHHETID------KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSG 153 (288)
T ss_dssp EEECCCC------HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCC
T ss_pred EEEeeCC------HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCC
Confidence 3333332 345666666554321 122221100 0 0 00
Q ss_pred EEe----ccCC---CCCCc------hhHHHHHHHHHHHhcCC-CEEE-EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCC
Q 045882 698 WHY----QDAA---PGFGS------CQAKELLDHLESVLANE-PVVV-KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGK 762 (832)
Q Consensus 698 ~~~----~~ad---~~~~~------~~a~el~~~l~~~l~~~-~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi 762 (832)
+.+ .... +.... ....+..+.+.+.+... .+.+ .++..++||.|++++||.|++.+++.+ |+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~---~~ 230 (288)
T 1nrw_A 154 FAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---NI 230 (288)
T ss_dssp EEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---TC
T ss_pred ceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCCCEEEEeeCCCcEEEecCCCChHHHHHHHHHHh---CC
Confidence 111 0000 00000 00112233333333322 3444 457789999999999999999999999 99
Q ss_pred CcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHh
Q 045882 763 LPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGL 827 (832)
Q Consensus 763 ~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l 827 (832)
+++++++|||+.||++||+.++. +|+||+. +..|+|++++ .++|.++|+++
T Consensus 231 ~~~~~~~~GD~~nD~~m~~~ag~--------------~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~ 287 (288)
T 1nrw_A 231 PLEETAAVGDSLNDKSMLEAAGK--------------GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 287 (288)
T ss_dssp CGGGEEEEESSGGGHHHHHHSSE--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred CHHHEEEEcCCHHHHHHHHHcCc--------------EEEEcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence 99999999999999999999984 5677764 3568898864 57799999875
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.4e-23 Score=211.81 Aligned_cols=210 Identities=14% Similarity=0.090 Sum_probs=148.3
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC-ceEEEeCCEEEEeCCCc-
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN-LGIAAEHGYYLRWTKKS- 656 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~-l~liaenGa~i~~~~~~- 656 (832)
.|+|++|+||||++ .++.+++++.++|++| +++|+.|+|+|||+...+.+++..++. .++|++||+.++..++.
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 80 (227)
T 1l6r_A 5 IRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSI 80 (227)
T ss_dssp CCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCE
T ss_pred eEEEEEECCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCE
Confidence 58999999999999 6778999999999999 688999999999999999998877653 35999999999874222
Q ss_pred c-EEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCC--CCCCchhHHHHHHHHHHHhcCCCEEEEEc
Q 045882 657 E-WETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAA--PGFGSCQAKELLDHLESVLANEPVVVKRG 733 (832)
Q Consensus 657 ~-w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad--~~~~~~~a~el~~~l~~~l~~~~~~v~~g 733 (832)
. |... + +.+.++ +.+.+. + ..+.. ...+++..+ ....... .+..+.+.+.+ .+.+.++
T Consensus 81 i~~~~~-----l---~~~~~i-~~~~~~----~-~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~ 141 (227)
T 1l6r_A 81 KKFFSN-----E---GTNKFL-EEMSKR----T-SMRSI-LTNRWREASTGFDIDPED-VDYVRKEAESR---GFVIFYS 141 (227)
T ss_dssp EESSCS-----H---HHHHHH-HHHTTT----S-SCBCC-GGGGGCSSSEEEBCCGGG-HHHHHHHHHTT---TEEEEEE
T ss_pred EEEecc-----H---HHHHHH-HHHHHH----h-cCCcc-ccccceecccceEEecCC-HHHHHHHHHhc---CEEEEec
Confidence 2 2211 1 344555 433321 1 11000 000000000 0000111 12223333323 4555588
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccc
Q 045882 734 YNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSK 809 (832)
Q Consensus 734 ~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~ 809 (832)
+.++||.|++++|+.+++++++++ |++++++++|||+.||++||+.++. +++||+. +..
T Consensus 142 ~~~~ei~~~~~~K~~~l~~l~~~~---~~~~~~~~~iGD~~nD~~m~~~ag~--------------~va~~n~~~~~k~~ 204 (227)
T 1l6r_A 142 GYSWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNIKAV 204 (227)
T ss_dssp TTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHHHHH
T ss_pred CcEEEEecCCCCHHHHHHHHHHHh---CcCHHHEEEECCcHHhHHHHHHcCc--------------eEEecCchHHHHHh
Confidence 999999999999999999999999 9999999999999999999999984 6777764 357
Q ss_pred cceEeCC--hhHHHHHHHHhh
Q 045882 810 ARYYLDD--EEDVLALLKGLA 828 (832)
Q Consensus 810 A~y~l~~--~~eV~~~L~~l~ 828 (832)
|+|++++ .++|.++|+++.
T Consensus 205 a~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 205 SDFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp CSEECSCCTTHHHHHHHHHTT
T ss_pred CCEEecCCCCcHHHHHHHHHh
Confidence 8898854 578999998864
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-22 Score=224.99 Aligned_cols=293 Identities=16% Similarity=0.176 Sum_probs=208.7
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhh-cC----C-chHHH-HHHHHhCCEEeecChhhHHHHHHH
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR-TL----P-VRNEI-LKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r-~l----p-~r~~i-l~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
|+|++|++...+++.++.+.. ++++.+.+|..++...... .. + .+..+ ...+-.+|.|.+.+....+.+.+
T Consensus 124 Div~~~~~~~~~~~~~~~~~~-~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~- 201 (438)
T 3c48_A 124 DLIHSHYWLSGQVGWLLRDLW-RIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH- 201 (438)
T ss_dssp SEEEEEHHHHHHHHHHHHHHH-TCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH-
T ss_pred CEEEeCCccHHHHHHHHHHHc-CCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH-
Confidence 999999887666665565543 6889999998754221000 00 0 01111 12345699999998877766643
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCCH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KGi 349 (832)
.+|.. ..++.++|+|||.+.|.+.. ......+++++ .++++|+++||+.+.||+
T Consensus 202 ---~~g~~---------------~~k~~vi~ngvd~~~~~~~~-----~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~ 258 (438)
T 3c48_A 202 ---HYDAD---------------PDRISVVSPGADVELYSPGN-----DRATERSRRELGIPLHTKVVAFVGRLQPFKGP 258 (438)
T ss_dssp ---HHCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCH
T ss_pred ---HhCCC---------------hhheEEecCCccccccCCcc-----cchhhhhHHhcCCCCCCcEEEEEeeecccCCH
Confidence 22322 11466799999998775321 11223355665 468899999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|+..+.+++|+. ++.|+++|.+. ..++. .+++++++++.+.. + .|. +.+.++.+++..+|+
T Consensus 259 ~~li~a~~~l~~~~p~~--~~~l~i~G~~~-~~g~~----~~~l~~~~~~~~l~----~--~v~-~~g~~~~~~~~~~~~ 324 (438)
T 3c48_A 259 QVLIKAVAALFDRDPDR--NLRVIICGGPS-GPNAT----PDTYRHMAEELGVE----K--RIR-FLDPRPPSELVAVYR 324 (438)
T ss_dssp HHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT----T--TEE-EECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCCcH----HHHHHHHHHHcCCC----C--cEE-EcCCCChHHHHHHHH
Confidence 99999999999998842 34588888532 11222 34455555553321 1 244 456899999999999
Q ss_pred hcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHH
Q 045882 430 LAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADAL 506 (832)
Q Consensus 430 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai 506 (832)
.||++|+||..||||++++|||+|+ .|+|+|..+|..+.+. .|++++|.|++++|++|
T Consensus 325 ~adv~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i 385 (438)
T 3c48_A 325 AADIVAVPSFNESFGLVAMEAQASG-------------------TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADAL 385 (438)
T ss_dssp HCSEEEECCSCCSSCHHHHHHHHTT-------------------CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHH
T ss_pred hCCEEEECccccCCchHHHHHHHcC-------------------CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHH
Confidence 9999999999999999999999994 4799999999998883 38999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 045882 507 HDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (832)
.++++ .++.+....++.++++.+++...+++.+++.++++....
T Consensus 386 ~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 386 ATLLD-DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence 99998 455566666777888888999999999998888876553
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-21 Score=224.23 Aligned_cols=300 Identities=15% Similarity=0.074 Sum_probs=206.5
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCCh----hhhhc--CC-------------chHHHHHHHHhCCEEe
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS----EIYRT--LP-------------VRNEILKALLNADLIG 259 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~----e~~r~--lp-------------~r~~il~~ll~~dlig 259 (832)
.|+|++|+++..+++.+++.+..++++.+.+|..++.. ..+.. ++ ...-....+..+|.|.
T Consensus 130 ~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 209 (485)
T 2qzs_A 130 PDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHIT 209 (485)
T ss_dssp CSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEE
T ss_pred CCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEE
Confidence 39999999998888888874456799999999875421 11111 01 0122234456799999
Q ss_pred ecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeE--EEEEEeecCCCchHHHhhcCC-----------CChHHHHHH
Q 045882 260 FHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRT--IYVKILHVGIHMGRLESALNH-----------PSSSIKVKE 326 (832)
Q Consensus 260 f~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~--~~i~i~P~GId~~~~~~~~~~-----------~~~~~~~~~ 326 (832)
..+....+.+.+. ..|..... . + .... .++.++|+|||.+.|.+.... +........
T Consensus 210 ~~S~~~~~~~~~~---~~~~~~~~---~--~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 2qzs_A 210 AVSPTYAREITEP---QFAYGMEG---L--L--QQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279 (485)
T ss_dssp ESSHHHHHHTTSH---HHHTTCHH---H--H--HHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHH
T ss_pred ecCHHHHHHHhcc---ccCcchHH---H--H--HhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHH
Confidence 8888766655321 01100000 0 0 0000 246779999999887643210 011123455
Q ss_pred HHHHcC-----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHh
Q 045882 327 IREQFK-----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRIN 401 (832)
Q Consensus 327 l~~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN 401 (832)
++++++ ++++|+++||+++.||+..+++|++++.+ +++ .|+++|.+ + .++++++++++.+.+
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~g-----~--~~~~~~l~~~~~~~~ 346 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGG----QLALLGAG-----D--PVLQEGFLAAAAEYP 346 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTC----EEEEEEEE-----C--HHHHHHHHHHHHHST
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCc----EEEEEeCC-----c--hHHHHHHHHHHHhCC
Confidence 666662 67899999999999999999999999876 344 48888843 2 134556666666542
Q ss_pred cccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccC
Q 045882 402 ETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF 481 (832)
Q Consensus 402 ~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (832)
..|+++.+. +.+++..+|+.||++|+||..||||++++|||+| +.|+|+|+.
T Consensus 347 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~-------------------G~PvI~s~~ 398 (485)
T 2qzs_A 347 --------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY-------------------GTLPLVRRT 398 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-------------------TCEEEEESS
T ss_pred --------CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC-------------------CCCEEECCC
Confidence 137656665 7888899999999999999999999999999999 457999999
Q ss_pred ccccccCC------------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 482 IGCSPSLS------------GAIRVNPWDIDAVADALHDAIT--MSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 482 ~G~s~~l~------------~a~~VnP~d~~~~A~ai~~aL~--m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
+|..+.+. .|++++|.|++++|++|.+++. ..++.++...++.++ ..+++...++++++-.++.
T Consensus 399 gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 399 GGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp HHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHH
T ss_pred CCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHh
Confidence 99998883 4899999999999999999994 244444444444443 7789999999998877776
Q ss_pred HHhh
Q 045882 548 CRDH 551 (832)
Q Consensus 548 ~~~~ 551 (832)
..++
T Consensus 477 ~~~~ 480 (485)
T 2qzs_A 477 KLEH 480 (485)
T ss_dssp C---
T ss_pred hhhh
Confidence 4443
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=214.17 Aligned_cols=218 Identities=15% Similarity=0.196 Sum_probs=148.7
Q ss_pred EEEEEecCCCcCCCCCCCCC-CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC----CceEEEeCCEEEEeCC
Q 045882 580 RAIFLDYDGTVVPHHALIKK-PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE----NLGIAAEHGYYLRWTK 654 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~~-~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----~l~liaenGa~i~~~~ 654 (832)
|+|+||+||||++ .++. +++.++++|++| +++|+.|+++|||+ ..+.+++..++ ..++|++||+.++..+
T Consensus 3 kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~ 77 (261)
T 2rbk_A 3 KALFFDIDGTLVS---FETHRIPSSTIEALEAA-HAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGE 77 (261)
T ss_dssp CEEEECSBTTTBC---TTTSSCCHHHHHHHHHH-HHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETT
T ss_pred cEEEEeCCCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECC
Confidence 7999999999999 5666 999999999999 57899999999999 88877665544 3468999999998744
Q ss_pred CccEEEcCcccchhHHHHHHHHHHHHHhc-CC-------ceEEeecceeEE-EEeccCC---------------CCCCc-
Q 045882 655 KSEWETSTVAADFEWKRITEPVMKLYTEA-TD-------GSYIEKKETALV-WHYQDAA---------------PGFGS- 709 (832)
Q Consensus 655 ~~~w~~~~~~~~~~w~~~v~~i~~~~~e~-~~-------gs~ie~k~~~l~-~~~~~ad---------------~~~~~- 709 (832)
...+...++ .+.+.++++...+. .+ +.+.+.....+. .+++... +-+..
T Consensus 78 ~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 151 (261)
T 2rbk_A 78 EVIYKSAIP------QEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMT 151 (261)
T ss_dssp EEEEECCCC------HHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEE
T ss_pred EEEEecCCC------HHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEE
Confidence 334444333 24455555554432 11 122211000000 0111000 00000
Q ss_pred -hhHHHHHHHHHHHhcCCCEEE-EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccccc
Q 045882 710 -CQAKELLDHLESVLANEPVVV-KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQAT 787 (832)
Q Consensus 710 -~~a~el~~~l~~~l~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~ 787 (832)
....+....+...+.+ +.+ .+++.++||.|.+++|+.+++.+++++ |++++++++|||+.||++|++.++.
T Consensus 152 ~~~~~~~~~~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~-- 224 (261)
T 2rbk_A 152 PFITEEEEKEVLPSIPT--CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI-- 224 (261)
T ss_dssp ECCCHHHHHHHGGGSTT--CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--
T ss_pred EEeCHHHHHHHHHhcCC--eEEEEecCCeEEecCCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCc--
Confidence 0001111223232322 343 356789999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCCCCcEEEEEeCCc----ccccceEeCChhH--HHHHHHHh
Q 045882 788 YGSSLPIAPEIFACTVGQK----PSKARYYLDDEED--VLALLKGL 827 (832)
Q Consensus 788 ~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~e--V~~~L~~l 827 (832)
+|++|+. +..|+|++++.++ |.++|+++
T Consensus 225 ------------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 225 ------------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp ------------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred ------------eEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 6777774 4679999987766 99999876
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9e-22 Score=219.02 Aligned_cols=286 Identities=15% Similarity=0.174 Sum_probs=210.1
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHH-HHHHhCCEEeecChhhHHHH
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEIL-KALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il-~~ll~~dligf~t~~~~~~F 269 (832)
+++..+| |+||+|+.....+...+.++....++.+.+|...+ .+...+....++ +.+-.+|.|.+.+....+.+
T Consensus 81 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 155 (394)
T 3okp_A 81 IIREREI--DNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRF 155 (394)
T ss_dssp HHHHTTC--SEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHH
T ss_pred HHHhcCC--CEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHH
Confidence 3455566 89999987766544444444444468889995432 122223333333 34567999999998776666
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEecccccc
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIF 346 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~ 346 (832)
.+. .+. ..++.++|+|||.+.|.+ ........+++++ .++++|+++||+++.
T Consensus 156 ~~~----~~~----------------~~~~~vi~ngv~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~ 210 (394)
T 3okp_A 156 KSA----FGS----------------HPTFEHLPSGVDVKRFTP-----ATPEDKSATRKKLGFTDTTPVIACNSRLVPR 210 (394)
T ss_dssp HHH----HCS----------------SSEEEECCCCBCTTTSCC-----CCHHHHHHHHHHTTCCTTCCEEEEESCSCGG
T ss_pred HHh----cCC----------------CCCeEEecCCcCHHHcCC-----CCchhhHHHHHhcCCCcCceEEEEEeccccc
Confidence 532 121 125778999999987752 1233456677776 355899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
||+..+++|++++.+++|+++ |+++|. ++..+.+ ++++..++ ..|.+ .+.++.+++..
T Consensus 211 Kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l----~~~~~~~~--------~~v~~-~g~~~~~~~~~ 268 (394)
T 3okp_A 211 KGQDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYESTL----RRLATDVS--------QNVKF-LGRLEYQDMIN 268 (394)
T ss_dssp GCHHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHHHH----HHHTGGGG--------GGEEE-EESCCHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHHHH----HHHHhccc--------CeEEE-cCCCCHHHHHH
Confidence 999999999999999999876 888874 3333333 33331111 12444 56799999999
Q ss_pred HHHhcCcceecccc-------cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC--CceEeCCC
Q 045882 427 YYALAECCIVNAVR-------DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS--GAIRVNPW 497 (832)
Q Consensus 427 ly~~ADv~vvtS~~-------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--~a~~VnP~ 497 (832)
+|+.||++|+||.. ||||++++|||+|+ .|+|+|+.+|..+.+. .|++++|.
T Consensus 269 ~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G-------------------~PvI~~~~~~~~e~i~~~~g~~~~~~ 329 (394)
T 3okp_A 269 TLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACG-------------------VPVIAGTSGGAPETVTPATGLVVEGS 329 (394)
T ss_dssp HHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTT-------------------CCEEECSSTTGGGGCCTTTEEECCTT
T ss_pred HHHhCCEEEecCccccccccccccCcHHHHHHHcC-------------------CCEEEeCCCChHHHHhcCCceEeCCC
Confidence 99999999999999 99999999999994 5799999999998884 58999999
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc-CCHHHHHHHHHHHHHHHH
Q 045882 498 DIDAVADALHDAITMSDVEKQLRHEKHYRYICS-HDVAYWAHSFMQDLERAC 548 (832)
Q Consensus 498 d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~ 548 (832)
|+++++++|.++++ .++.++...++.++++.+ ++...+++.+++.+++..
T Consensus 330 d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 330 DVDKLSELLIELLD-DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp CHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 99999999999998 456666666777887765 899999999988887654
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=234.24 Aligned_cols=305 Identities=13% Similarity=0.025 Sum_probs=213.1
Q ss_pred CCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhh-hhc--C--C---------chHHH-HHHHHhCCEEee
Q 045882 196 NPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEI-YRT--L--P---------VRNEI-LKALLNADLIGF 260 (832)
Q Consensus 196 ~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~-~r~--l--p---------~r~~i-l~~ll~~dligf 260 (832)
+| |+|++|+++..+++.++.+.. ++++.+.+|..++...- +.. . | .+..+ ...+-.+|.|.+
T Consensus 120 ~~--Divh~~~~~~~~~~~~~~~~~-~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 196 (499)
T 2r60_A 120 FP--QVVTTHYGDGGLAGVLLKNIK-GLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIV 196 (499)
T ss_dssp CC--SEEEEEHHHHHHHHHHHHHHH-CCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEE
T ss_pred CC--CEEEEcCCcchHHHHHHHHhc-CCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEE
Confidence 55 999999988776766666544 68889999986542210 000 0 0 01111 223557899988
Q ss_pred cChhhHHHHHHHHHHHhC-CcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--------
Q 045882 261 HTFDYARHFLSCCSRMLG-LDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-------- 331 (832)
Q Consensus 261 ~t~~~~~~Fl~~~~r~l~-~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-------- 331 (832)
.+....+.+.+. ..+| +... ....++.++|+|||.+.|.+.. .......+++++
T Consensus 197 ~S~~~~~~~~~~--~~~g~~~~~-----------~~~~ki~vi~ngvd~~~~~~~~----~~~~~~~~r~~~~~~~~~~~ 259 (499)
T 2r60_A 197 STSQERFGQYSH--DLYRGAVNV-----------EDDDKFSVIPPGVNTRVFDGEY----GDKIKAKITKYLERDLGSER 259 (499)
T ss_dssp SSHHHHHHTTTS--GGGTTTCCT-----------TCGGGEEECCCCBCTTTSSSCC----CHHHHHHHHHHHHHHSCGGG
T ss_pred CCHHHHHHHHhh--hcccccccc-----------cCCCCeEEECCCcChhhcCccc----hhhhHHHHHHHhcccccccC
Confidence 887665544310 0012 1000 0112467799999998875321 122234455543
Q ss_pred CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCCh-------hHHHHHHHHHHHHHHHHhccc
Q 045882 332 KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTG-------KDVQDAKLETYTITKRINETY 404 (832)
Q Consensus 332 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-------~~~~~l~~ev~~lv~~iN~~~ 404 (832)
.++++|+++||+++.||+..+++|+.++.+++|+. +.|+++|... +.. ....++.+++++++++.+..
T Consensus 260 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~- 334 (499)
T 2r60_A 260 MELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR- 334 (499)
T ss_dssp TTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-
T ss_pred CCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC-
Confidence 37789999999999999999999999998876643 3477776421 110 11234466777777765432
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHHhc----CcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc
Q 045882 405 GVPGYEPVILIDRPVPLHEKTAYYALA----ECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480 (832)
Q Consensus 405 ~~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (832)
..|.+ .+.++.+++..+|+.| |++|+||..||||++++|||+|+ .|+|+|+
T Consensus 335 -----~~V~~-~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G-------------------~PvI~s~ 389 (499)
T 2r60_A 335 -----GKVSM-FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG-------------------LPAVVTR 389 (499)
T ss_dssp -----TTEEE-EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT-------------------CCEEEES
T ss_pred -----ceEEE-CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcC-------------------CCEEEec
Confidence 12554 5689999999999999 99999999999999999999994 5799999
Q ss_pred CccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc-CCHHHHHHHHHHHHHHHHHhh
Q 045882 481 FIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS-HDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 481 ~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~~ 551 (832)
.+|..+.+. .|++|+|.|++++|++|.++++ .++.+....++.++++.+ ++...+++.+++-++++....
T Consensus 390 ~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 390 NGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp SBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 999988883 4899999999999999999998 455666667777888877 999999999999888876554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=208.19 Aligned_cols=212 Identities=18% Similarity=0.204 Sum_probs=143.5
Q ss_pred EEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEEEeCC--
Q 045882 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYLRWTK-- 654 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i~~~~-- 654 (832)
++|++|+||||++ .+..+ +++.++|+++ + +|+.|+|+|||+...+.+++..++ ..++|++||+.++...
T Consensus 4 ~li~~DlDGTLl~---~~~~~-~~~~~~l~~~-~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~ 77 (244)
T 1s2o_A 4 LLLISDLDNTWVG---DQQAL-EHLQEYLGDR-R-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGL 77 (244)
T ss_dssp EEEEECTBTTTBS---CHHHH-HHHHHHHHTT-G-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEE
T ss_pred eEEEEeCCCCCcC---CHHHH-HHHHHHHHHh-c-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCc
Confidence 5999999999998 33333 6788889886 4 489999999999999999887632 2579999999998742
Q ss_pred CccEEEcCcccchhH-HHHHHHHHHHHHhcCCceEE----eecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcC--CC
Q 045882 655 KSEWETSTVAADFEW-KRITEPVMKLYTEATDGSYI----EKKETALVWHYQDAAPGFGSCQAKELLDHLESVLAN--EP 727 (832)
Q Consensus 655 ~~~w~~~~~~~~~~w-~~~v~~i~~~~~e~~~gs~i----e~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~--~~ 727 (832)
...|...+ ...| .+.+..++ ...++... +.+...+.+++. ++.. .+..+.+.+.+.. ..
T Consensus 78 ~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ki~~~~~---~~~~----~~~~~~l~~~~~~~~~~ 143 (244)
T 1s2o_A 78 DQHWADYL---SEHWQRDILQAIA----DGFEALKPQSPLEQNPWKISYHLD---PQAC----PTVIDQLTEMLKETGIP 143 (244)
T ss_dssp CHHHHHHH---HTTCCHHHHHHHH----HTCTTEEECCGGGCBTTBEEEEEC---TTSC----THHHHHHHHHHHTSSCC
T ss_pred ChHHHHHH---hccccHHHHHHHH----HhccCccccCcccCCCeEEEEEeC---hhhH----HHHHHHHHHHHHhcCCC
Confidence 11121111 1112 12222222 22232222 122334444442 2211 1233334433332 24
Q ss_pred EEE-EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc
Q 045882 728 VVV-KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK 806 (832)
Q Consensus 728 ~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~ 806 (832)
+.+ .+++.++||.|++++||.+++++++++ |++++++++|||+.||++||+.++ ++|+||+.
T Consensus 144 ~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~~g--------------~~va~~na 206 (244)
T 1s2o_A 144 VQVIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSA--------------RGVIVRNA 206 (244)
T ss_dssp EEEEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSS--------------EEEECTTC
T ss_pred eEEEEecCceEEeccCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHhccC--------------cEEEEcCC
Confidence 554 567899999999999999999999999 999999999999999999999887 46778874
Q ss_pred ----ccc-------cceEeCC--hhHHHHHHHHhh
Q 045882 807 ----PSK-------ARYYLDD--EEDVLALLKGLA 828 (832)
Q Consensus 807 ----~s~-------A~y~l~~--~~eV~~~L~~l~ 828 (832)
+.. |.|++++ .++|.+.|+++.
T Consensus 207 ~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~~~ 241 (244)
T 1s2o_A 207 QPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHFD 241 (244)
T ss_dssp CHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHTT
T ss_pred cHHHHHHHhcccccceeecCCcchhHHHHHHHHhc
Confidence 232 6788854 577999998764
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=224.14 Aligned_cols=292 Identities=14% Similarity=0.148 Sum_probs=205.5
Q ss_pred CCEEEEeCcccccHHHHHHhh-cCCCeEEEEecCCCCCh----hhhhc--CCc-------------hHHHHHHHHhCCEE
Q 045882 199 EDYVWIHDYHLMVLPTFLRRR-FHRVKLGFFLHSPFPSS----EIYRT--LPV-------------RNEILKALLNADLI 258 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~-~~~~~ig~flH~PfP~~----e~~r~--lp~-------------r~~il~~ll~~dli 258 (832)
.|+|++|+++..+++.++++. ..++++.+.+|..++.. ..+.. +|. ..-.-..+..+|.|
T Consensus 131 ~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 210 (485)
T 1rzu_A 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATAL 210 (485)
T ss_dssp CSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEE
Confidence 399999999988888888764 45789999999876421 11111 110 11223345679999
Q ss_pred eecChhhHHHHHHH-H----HHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCC-----------CChHH
Q 045882 259 GFHTFDYARHFLSC-C----SRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNH-----------PSSSI 322 (832)
Q Consensus 259 gf~t~~~~~~Fl~~-~----~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~-----------~~~~~ 322 (832)
...+....+.+.+. . ..+++.. ..++.++|+|||.+.|.+.... +....
T Consensus 211 i~~S~~~~~~~~~~~~g~~~~~~~~~~---------------~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (485)
T 1rzu_A 211 STVSPSYAEEILTAEFGMGLEGVIGSR---------------AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRAL 275 (485)
T ss_dssp EESCHHHHHHTTSHHHHTTCHHHHHTT---------------GGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHH
T ss_pred EecCHhHHHHHhccccCcchHHHHHhh---------------cCCceEEcCCCcccccCCcccccccccccccchhhHHH
Confidence 98888776655421 0 0001111 1146679999999887643210 01112
Q ss_pred HHHHHHHHcC----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHH
Q 045882 323 KVKEIREQFK----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITK 398 (832)
Q Consensus 323 ~~~~l~~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~ 398 (832)
....++++++ ++++|++|||+++.||+..+++|+.++.+ +++ .|+++|.+ + .++++++++++.
T Consensus 276 ~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~g-----~--~~~~~~l~~~~~ 342 (485)
T 1rzu_A 276 NKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGG----RLVVLGAG-----D--VALEGALLAAAS 342 (485)
T ss_dssp HHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTC----EEEEEECB-----C--HHHHHHHHHHHH
T ss_pred hHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCc----eEEEEeCC-----c--hHHHHHHHHHHH
Confidence 2345666662 26799999999999999999999999876 344 48888843 2 134556666666
Q ss_pred HHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEe
Q 045882 399 RINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVI 478 (832)
Q Consensus 399 ~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (832)
+.+ ..|+++.+. +.+++..+|+.||++|+||..||||++++|||+| +.|+|+
T Consensus 343 ~~~--------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~-------------------G~PvI~ 394 (485)
T 1rzu_A 343 RHH--------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY-------------------GCIPVV 394 (485)
T ss_dssp HTT--------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-------------------TCEEEE
T ss_pred hCC--------CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHC-------------------CCCEEE
Confidence 542 136656665 7888899999999999999999999999999999 457999
Q ss_pred ccCccccccCC------------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 479 SEFIGCSPSLS------------GAIRVNPWDIDAVADALHDAIT--MSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 479 Se~~G~s~~l~------------~a~~VnP~d~~~~A~ai~~aL~--m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
|..+|..+.+. .|++++|.|++++|++|.++++ ..++.++...++.++ ..+++...++++++-.
T Consensus 395 s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y 472 (485)
T 1rzu_A 395 ARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALY 472 (485)
T ss_dssp ESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHH
T ss_pred eCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHH
Confidence 99999998883 4799999999999999999994 244444444444443 6788888888888877
Q ss_pred HHHH
Q 045882 545 ERAC 548 (832)
Q Consensus 545 ~~~~ 548 (832)
+++.
T Consensus 473 ~~~~ 476 (485)
T 1rzu_A 473 SQLI 476 (485)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 6654
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.88 E-value=8.2e-22 Score=204.96 Aligned_cols=213 Identities=19% Similarity=0.139 Sum_probs=152.2
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE 657 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~ 657 (832)
.|+|+||+||||++ .++.+++.+.++|++| +++|+.|+++|||+...+.+++..++ ..++|++||+.++..+...
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (231)
T 1wr8_A 3 IKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRI 78 (231)
T ss_dssp CCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEE
T ss_pred eeEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEE
Confidence 57999999999999 6778999999999999 67899999999999999988877654 3459999999988743322
Q ss_pred EEEcCcccchhHHHHHHHHHHHHHhcCCceEEee-cce---eEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEc
Q 045882 658 WETSTVAADFEWKRITEPVMKLYTEATDGSYIEK-KET---ALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRG 733 (832)
Q Consensus 658 w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~-k~~---~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g 733 (832)
|...+ +.+.++++.+.+..||..++. ... .+.+. .+... .+..+.+.+.+.. .+.+.++
T Consensus 79 ~~~~l--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~-~~~~~~~ 141 (231)
T 1wr8_A 79 FLASM--------DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM----RETIN----VETVREIINELNL-NLVAVDS 141 (231)
T ss_dssp ESCCC--------SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC----TTTSC----HHHHHHHHHHTTC-SCEEEEC
T ss_pred EeccH--------HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE----CCCCC----HHHHHHHHHhcCC-cEEEEec
Confidence 32221 345555655553444543311 000 01111 11111 1222222222332 2444488
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccc
Q 045882 734 YNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSK 809 (832)
Q Consensus 734 ~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~ 809 (832)
..++|+.|++++|+.+++.+++++ |++++++++|||+.||++|++.++. +++||+. +..
T Consensus 142 ~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~~~ 204 (231)
T 1wr8_A 142 GFAIHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILKEN 204 (231)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTT
T ss_pred CcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC--------------eEEecCCCHHHHhh
Confidence 899999999999999999999999 9999999999999999999999984 5667764 357
Q ss_pred cceEeCC--hhHHHHHHHHhhh
Q 045882 810 ARYYLDD--EEDVLALLKGLAA 829 (832)
Q Consensus 810 A~y~l~~--~~eV~~~L~~l~~ 829 (832)
|+|++++ .++|.++|+++..
T Consensus 205 a~~v~~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 205 ADYVTKKEYGEGGAEAIYHILE 226 (231)
T ss_dssp CSEECSSCHHHHHHHHHHHHHH
T ss_pred CCEEecCCCcchHHHHHHHHHH
Confidence 8999875 4569999998753
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-22 Score=224.37 Aligned_cols=297 Identities=16% Similarity=0.159 Sum_probs=206.7
Q ss_pred HhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCCh--hhhhcCCchHHHHHHH
Q 045882 175 LLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS--EIYRTLPVRNEILKAL 252 (832)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~--e~~r~lp~r~~il~~l 252 (832)
..|..|....+.+++.+ +..+| |+|++|+++...+..+++++ .++.+.+|..++.. ..+ ..+.+-+
T Consensus 106 ~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~~---~p~v~~~h~~~~~~~~~~~------~~~~~~~ 173 (416)
T 2x6q_A 106 EMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEKK---SPWLWRCHIDLSSPNREFW------EFLRRFV 173 (416)
T ss_dssp HHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCCC---SCEEEECCSCCSSCCHHHH------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHhc---CCEEEEEccccCCccHHHH------HHHHHHH
Confidence 34555554444444322 33355 99999999887776655432 78999999877542 111 1122223
Q ss_pred HhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-
Q 045882 253 LNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF- 331 (832)
Q Consensus 253 l~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~- 331 (832)
..+|.+.+.+.++.+..+ .. .++.++|+|||...+... +........+++++
T Consensus 174 ~~~~~~i~~~s~~~~~~~----------------------~~--~~~~vi~ngvd~~~~~~~---~~~~~~~~~~r~~~~ 226 (416)
T 2x6q_A 174 EKYDRYIFHLPEYVQPEL----------------------DR--NKAVIMPPSIDPLSEKNV---ELKQTEILRILERFD 226 (416)
T ss_dssp TTSSEEEESSGGGSCTTS----------------------CT--TTEEECCCCBCTTSTTTS---CCCHHHHHHHHHHTT
T ss_pred HhCCEEEEechHHHHhhC----------------------Cc--cceEEeCCCCChhhhccc---ccChhhHHHHHHHhC
Confidence 345655544433322110 00 235679999998766432 11233455667766
Q ss_pred --CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCc
Q 045882 332 --KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGY 409 (832)
Q Consensus 332 --~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~ 409 (832)
.++++|+++||+++.||+..+++|+..+.+++|+++ |+++|.+... .+ +..+.+++++++.+..
T Consensus 227 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~~-~~---~~~~~l~~~~~~~~~~------ 292 (416)
T 2x6q_A 227 VDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAHD-DP---EGWIYFEKTLRKIGED------ 292 (416)
T ss_dssp CCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCTT-CH---HHHHHHHHHHHHHTTC------
T ss_pred CCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCccc-ch---hHHHHHHHHHHHhCCC------
Confidence 367899999999999999999999999999999877 8888854311 12 2344555666655431
Q ss_pred ccEEEec--CCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc
Q 045882 410 EPVILID--RPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS 487 (832)
Q Consensus 410 ~pv~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~ 487 (832)
..|.+++ ..++.+++..+|+.||++|+||..||||++++|||+|+ .|+|+|+.+|..+.
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G-------------------~PvI~~~~~g~~e~ 353 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKG-------------------KPVIGRAVGGIKFQ 353 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTT-------------------CCEEEESCHHHHHH
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcC-------------------CCEEEccCCCChhh
Confidence 1366654 25668899999999999999999999999999999994 57999999999988
Q ss_pred CC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHHHHHHHH
Q 045882 488 LS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSFMQDLER 546 (832)
Q Consensus 488 l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 546 (832)
+. .|++++ |++++|++|.++++ .++.++...++.++++. .+++...++.+++-+++
T Consensus 354 i~~~~~g~l~~--d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 354 IVDGETGFLVR--DANEAVEVVLYLLK-HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp CCBTTTEEEES--SHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred eecCCCeEEEC--CHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 83 488886 99999999999998 45555666667777775 68999988888776654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-22 Score=222.32 Aligned_cols=287 Identities=11% Similarity=0.131 Sum_probs=204.1
Q ss_pred HHhCCCCCEEEEeCcccccHHHHHHhh-cC-CCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCC--EEeecChhhHHH
Q 045882 193 EVINPEEDYVWIHDYHLMVLPTFLRRR-FH-RVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNAD--LIGFHTFDYARH 268 (832)
Q Consensus 193 ~~~~~~~d~vwvhDyhl~llp~~lr~~-~~-~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~d--ligf~t~~~~~~ 268 (832)
...+| |+|++|.+...+.+.+.+.. .| ..++...+|...+... ..+-..+-.+| .+.+.+....+.
T Consensus 78 ~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~ 147 (413)
T 3oy2_A 78 DVHKP--DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISD 147 (413)
T ss_dssp HHHCC--SEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHH
T ss_pred HhcCC--CEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHH
Confidence 44566 89999944443333332222 22 3456666775443221 11222344577 888888766665
Q ss_pred HHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---C--CCEEEEEeccc
Q 045882 269 FLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---K--GKKVIVGVDDM 343 (832)
Q Consensus 269 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~--~~~vil~VdRl 343 (832)
+.. ++. ..++.++|+|||.+.|. ..++++ . ++++|+++||+
T Consensus 148 ~~~-----~~~----------------~~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~~il~vGr~ 193 (413)
T 3oy2_A 148 ICN-----YGC----------------KVPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDVLFLNMNRN 193 (413)
T ss_dssp HHH-----TTC----------------CSCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSEEEECCSCS
T ss_pred HHH-----cCC----------------CCceEEeCCCCCHHHHH-------------HHHHhcCCCcccCceEEEEcCCC
Confidence 542 232 12567899999998761 122233 2 68999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHH
Q 045882 344 DIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHE 423 (832)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~e 423 (832)
.+.||+..+++|+.++.+++|+++ |+++|.+.... ..++++++++++++.+..-.-.-+..|+++.+.++.++
T Consensus 194 ~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~---~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~ 266 (413)
T 3oy2_A 194 TARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHES---KFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266 (413)
T ss_dssp SGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTC---SCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHH
T ss_pred chhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccc---hhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHH
Confidence 999999999999999999999987 88888654221 12245566666666543210000012677889999999
Q ss_pred HHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCC-------------
Q 045882 424 KTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSG------------- 490 (832)
Q Consensus 424 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~------------- 490 (832)
+..+|+.||++|+||..||||++++|||+|+ .|+|+|..+|..+.+.+
T Consensus 267 ~~~~~~~adv~v~pS~~E~~~~~~lEAma~G-------------------~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVLG-------------------KPLIISAVGGADDYFSGDCVYKIKPSAWIS 327 (413)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHHHHHHHTTT-------------------CCEEEECCHHHHHHSCTTTSEEECCCEEEE
T ss_pred HHHHHHhCCEEEeCCCcCCCCcHHHHHHHcC-------------------CCEEEcCCCChHHHHccCcccccccccccc
Confidence 9999999999999999999999999999994 57999999999888843
Q ss_pred -----ce--EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHHHHHhh
Q 045882 491 -----AI--RVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 491 -----a~--~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~~ 551 (832)
|+ +++|.|++++|++| ++++ .++.++...++.++++ ..++...+++.+++-++++.+..
T Consensus 328 ~~~~~G~~gl~~~~d~~~la~~i-~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 328 VDDRDGIGGIEGIIDVDDLVEAF-TFFK-DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp CTTTCSSCCEEEECCHHHHHHHH-HHTT-SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccccCcceeeCCCCHHHHHHHH-HHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999 9998 5666667777788887 46799999999999988876543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=210.96 Aligned_cols=196 Identities=19% Similarity=0.120 Sum_probs=132.2
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCC--
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKK-- 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~-- 655 (832)
.|+|++|+||||+ . +..+++ ++++|++| +++|+.|+|+|||+...+.+++..++ ..++|++||+.++..++
T Consensus 2 ikli~~DlDGTLl-~---~~~~~~-~~~~l~~l-~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 75 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P---GYEPDP-AKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYF 75 (249)
T ss_dssp EEEEEECCSTTTC-T---TSCSGG-GHHHHHHH-HHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCC
T ss_pred ccEEEEeCCCCcc-C---CCCcHH-HHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcc
Confidence 4899999999999 3 344554 99999999 67899999999999999999887765 35899999999997642
Q ss_pred ------------ccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEee-----------------------cceeEEEEe
Q 045882 656 ------------SEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEK-----------------------KETALVWHY 700 (832)
Q Consensus 656 ------------~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~-----------------------k~~~l~~~~ 700 (832)
..+...++ .+.+.++++.+.+..+ ..... ......+.+
T Consensus 76 ~~~~~~~~~~~~~i~~~~l~------~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (249)
T 2zos_A 76 PFDVKGKEVGNYIVIELGIR------VEKIREELKKLENIYG-LKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFE 148 (249)
T ss_dssp C------CCCCCCEEECSCC------HHHHHHHHHHHHHHHT-CEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEE
T ss_pred cccccccccCceEEEecCCC------HHHHHHHHHHHHhhcC-EEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEe
Confidence 22333332 2344444444332100 00000 000000001
Q ss_pred ccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCC-CcceEEEEeCChhhHHH
Q 045882 701 QDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGK-LPDFVLCVGDDRSDEDM 779 (832)
Q Consensus 701 ~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi-~~d~vl~~GDd~ND~~M 779 (832)
.. +++ ..+.+.. ..+.+..+..++||.| ++|||.|+++|++++ |+ +++++++|||+.||++|
T Consensus 149 ~~-~~~--------~~~~l~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~---~~~~~~~viafGD~~NDi~M 211 (249)
T 2zos_A 149 WS-RDG--------WEEVLVE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFY---KRLGQIESYAVGDSYNDFPM 211 (249)
T ss_dssp CS-SSC--------HHHHHHH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHH---HTTSCEEEEEEECSGGGHHH
T ss_pred cC-CHH--------HHHHHHh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHh---ccCCCceEEEECCCcccHHH
Confidence 00 011 1223322 2455566667899999 999999999999998 88 89999999999999999
Q ss_pred HHHcccccCCCCCCCCCcEEEEEeCCcc-----cccceEeCChh
Q 045882 780 FESISQATYGSSLPIAPEIFACTVGQKP-----SKARYYLDDEE 818 (832)
Q Consensus 780 f~~a~~~~~~~~~~~~~~~f~v~vG~~~-----s~A~y~l~~~~ 818 (832)
|+.++. +|+||++. ..|+|++++.+
T Consensus 212 l~~ag~--------------~va~gna~~~~~~~~a~~v~~~~~ 241 (249)
T 2zos_A 212 FEVVDK--------------VFIVGSLKHKKAQNVSSIIDVLEV 241 (249)
T ss_dssp HTTSSE--------------EEEESSCCCTTEEEESSHHHHHHH
T ss_pred HHhCCc--------------EEEeCCCCccccchhceEEecccc
Confidence 999984 67777643 34666665544
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-21 Score=214.62 Aligned_cols=280 Identities=12% Similarity=0.049 Sum_probs=209.5
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHH
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFL 270 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl 270 (832)
+++..+| |+|++|.+....+..++.+.. +.++.+.+|..+|....++.+-..-+ ..+-.+|.+.+.+....+.+.
T Consensus 102 ~l~~~~~--Dii~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~ 176 (406)
T 2gek_A 102 WIAEGDF--DVLHIHEPNAPSLSMLALQAA-EGPIVATFHTSTTKSLTLSVFQGILR--PYHEKIIGRIAVSDLARRWQM 176 (406)
T ss_dssp HHHHHCC--SEEEEECCCSSSHHHHHHHHE-ESSEEEEECCCCCSHHHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHH
T ss_pred HHHhcCC--CEEEECCccchHHHHHHHHhc-CCCEEEEEcCcchhhhhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHH
Confidence 3444566 899999999887755555543 68899999999887643322111111 445679999998876666554
Q ss_pred HHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccc-cccCCH
Q 045882 271 SCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDM-DIFKGI 349 (832)
Q Consensus 271 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRl-d~~KGi 349 (832)
+. ++. . ++ ++|+|+|.+.|.+....+. .-+++++|+++||+ .+.||+
T Consensus 177 ~~----~~~---------------~--~~-vi~~~v~~~~~~~~~~~~~----------~~~~~~~i~~~G~~~~~~Kg~ 224 (406)
T 2gek_A 177 EA----LGS---------------D--AV-EIPNGVDVASFADAPLLDG----------YPREGRTVLFLGRYDEPRKGM 224 (406)
T ss_dssp HH----HSS---------------C--EE-ECCCCBCHHHHHTCCCCTT----------CSCSSCEEEEESCTTSGGGCH
T ss_pred Hh----cCC---------------C--cE-EecCCCChhhcCCCchhhh----------ccCCCeEEEEEeeeCccccCH
Confidence 31 111 1 46 7999999998875321110 01256899999999 999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|+.++.+++|+++ |+.+|.. ++ +++++. +++.. ..|. +.+.++.+++..+|+
T Consensus 225 ~~li~a~~~l~~~~~~~~----l~i~G~~-----~~-~~l~~~----~~~~~--------~~v~-~~g~~~~~~~~~~~~ 281 (406)
T 2gek_A 225 AVLLAALPKLVARFPDVE----ILIVGRG-----DE-DELREQ----AGDLA--------GHLR-FLGQVDDATKASAMR 281 (406)
T ss_dssp HHHHHHHHHHHTTSTTCE----EEEESCS-----CH-HHHHHH----TGGGG--------GGEE-ECCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeE----EEEEcCC-----cH-HHHHHH----HHhcc--------CcEE-EEecCCHHHHHHHHH
Confidence 999999999999888776 8888743 33 334433 32220 1244 467899999999999
Q ss_pred hcCcceeccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHH
Q 045882 430 LAECCIVNAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (832)
Q Consensus 430 ~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~a 505 (832)
.||++|+||. .||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|+++++++
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 342 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAA-------------------GTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAA 342 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHH-------------------TCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHH
T ss_pred HCCEEEecCCCCCCCchHHHHHHHc-------------------CCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHH
Confidence 9999999997 99999999999999 45799999998888874 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHh
Q 045882 506 LHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRD 550 (832)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 550 (832)
|.++++. ++.+....++.++++..++....++.+++-+++....
T Consensus 343 i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 343 LIGILED-DQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHHHC-HHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHcC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999984 5556666677788888999999999998888876544
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-22 Score=239.54 Aligned_cols=311 Identities=14% Similarity=0.121 Sum_probs=212.2
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchH---------H---HHHHHHhCCEEeecChhhHH
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRN---------E---ILKALLNADLIGFHTFDYAR 267 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~---------~---il~~ll~~dligf~t~~~~~ 267 (832)
|+|+.|++...+++.+++++. ++++.++.|...+..-......++. . -...+-.||.|...+...+.
T Consensus 409 DVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~ 487 (816)
T 3s28_A 409 DLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIA 487 (816)
T ss_dssp SEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHH
T ss_pred eEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHH
Confidence 999999887777777776665 7899999997543211111111110 0 11256679999888876665
Q ss_pred HHHHHHHHHhCCcccccCc---------eeeEEEcCeEEEEEEeecCCCchHHHhhcCCCC----hHHHHHHH-------
Q 045882 268 HFLSCCSRMLGLDYESKRG---------YIGLEYFGRTIYVKILHVGIHMGRLESALNHPS----SSIKVKEI------- 327 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~---------~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~----~~~~~~~l------- 327 (832)
..... .+ .+....+ ..++..... ++.++|+|||.+.|.+...... .......+
T Consensus 488 ~l~~~----~~-~y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~ 560 (816)
T 3s28_A 488 GSKET----VG-QYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVEN 560 (816)
T ss_dssp CCSSS----CC-TTGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCB
T ss_pred HHHHH----HH-HhhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhH
Confidence 32110 00 0111000 000111111 6788999999999875432211 01111111
Q ss_pred HHH-----cCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCC--CCChhHHHHHHHHHHHHHHHH
Q 045882 328 REQ-----FKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPA--RSTGKDVQDAKLETYTITKRI 400 (832)
Q Consensus 328 ~~~-----~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~--r~~~~~~~~l~~ev~~lv~~i 400 (832)
++. ..++++|++|||+++.||+..+++|+.++.+++|+++ |+++|.+. .....+..+..+++.+++++.
T Consensus 561 r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~~l 636 (816)
T 3s28_A 561 KEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIEEY 636 (816)
T ss_dssp TTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHHHc
Confidence 111 1467899999999999999999999999988887766 99898654 222344455667777777775
Q ss_pred hcccCCCCcccEEEec---CCCCHHHHHHHHH-hcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceE
Q 045882 401 NETYGVPGYEPVILID---RPVPLHEKTAYYA-LAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSML 476 (832)
Q Consensus 401 N~~~~~~~~~pv~~~~---~~v~~~el~aly~-~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~l 476 (832)
+.. ..|.+++ +.++.+++..+|+ +||+||+||..||||++++|||||+ .|+
T Consensus 637 gL~------~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G-------------------~PV 691 (816)
T 3s28_A 637 KLN------GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG-------------------LPT 691 (816)
T ss_dssp TCB------BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTT-------------------CCE
T ss_pred CCC------CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcC-------------------CCE
Confidence 432 2355554 2455689999998 6899999999999999999999994 579
Q ss_pred EeccCccccccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHHH
Q 045882 477 VISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAIT---MSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 477 V~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~---m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 547 (832)
|+|..+|..+.+. .|++|+|.|++++|++|.++++ ..++.++...++.++++ ..+++..+++++++-.++.
T Consensus 692 Iasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 692 FATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp EEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred EEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999983 4899999999999999988872 24456666677778888 7799999999998876654
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-20 Score=215.00 Aligned_cols=306 Identities=15% Similarity=0.080 Sum_probs=198.8
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhc------------CC--------------chHHHH-HHH
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT------------LP--------------VRNEIL-KAL 252 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~------------lp--------------~r~~il-~~l 252 (832)
|++++||+|..++|.+||++.++++..|+.|.- ++-|. +. ..-.++ .++
T Consensus 183 dIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~t----elGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga 258 (725)
T 3nb0_A 183 IVAHFHEWLAGVALPLCRKRRIDVVTIFTTHAT----LLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAA 258 (725)
T ss_dssp EEEEEESGGGCTHHHHHHHTTCSCEEEEEESSC----HHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cEEEeCchhhhHHHHHHHHhCCCCCEEEEEecc----hhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHH
Confidence 899999999999999999999999999999953 32222 11 011122 356
Q ss_pred HhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCC-ChHHHHHHH----
Q 045882 253 LNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHP-SSSIKVKEI---- 327 (832)
Q Consensus 253 l~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~-~~~~~~~~l---- 327 (832)
..||.|-.-+..|++.-. .+++.. ...| +|+|||++.|.+..... .....++++
T Consensus 259 ~~AD~ITTVS~~yA~Ei~----~Ll~r~---------------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l 317 (725)
T 3nb0_A 259 HSADVFTTVSQITAFEAE----HLLKRK---------------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFV 317 (725)
T ss_dssp HHSSEEEESSHHHHHHHH----HHTSSC---------------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHH
T ss_pred HhCCEEEECCHHHHHHHH----HHhcCC---------------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHH
Confidence 678888877776765433 243321 1123 89999998876421000 001112222
Q ss_pred HHHc-------CCCEEEEE-ecccc-ccCCHHHHHHHHHHHHHhC--CCccCcEEEEEEecCCCCChhHH-----HHHHH
Q 045882 328 REQF-------KGKKVIVG-VDDMD-IFKGISLKLLAMEQLLKVH--PELQGKLVLVQIVNPARSTGKDV-----QDAKL 391 (832)
Q Consensus 328 ~~~~-------~~~~vil~-VdRld-~~KGi~~~l~A~~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~-----~~l~~ 391 (832)
+..+ .+++++++ ++|++ ..||++.++.|+.+|...- .... +-|+..|-.|+...+... +.+..
T Consensus 318 ~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~-~~vvafii~p~~~~~~~~~~l~~~~~~~ 396 (725)
T 3nb0_A 318 RGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSK-KTVVAFIVMPAKNNSFTVEALKGQAEVR 396 (725)
T ss_dssp HHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCC-CEEEEEEECCCCEEEECHHHHHHHHHHH
T ss_pred HhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCC-CcEEEEEEeCCCCCCCchhhhcchhHHH
Confidence 2322 14666666 79999 5799999999999987531 1222 223333334443332211 11111
Q ss_pred HHHH----------------------------------------------------------------------------
Q 045882 392 ETYT---------------------------------------------------------------------------- 395 (832)
Q Consensus 392 ev~~---------------------------------------------------------------------------- 395 (832)
++.+
T Consensus 397 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il 476 (725)
T 3nb0_A 397 ALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLIL 476 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHH
Confidence 1111
Q ss_pred -HHHHHhcccCCCCcccEEEecCCCCHH------HHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhc
Q 045882 396 -ITKRINETYGVPGYEPVILIDRPVPLH------EKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELAS 468 (832)
Q Consensus 396 -lv~~iN~~~~~~~~~pv~~~~~~v~~~------el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~ 468 (832)
.+++++..-...+...|+|+.+.++.. ++..+|+.||+||+||.+||||++++|||||
T Consensus 477 ~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~--------------- 541 (725)
T 3nb0_A 477 NKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVM--------------- 541 (725)
T ss_dssp HHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHT---------------
T ss_pred HHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHc---------------
Confidence 112222211222344678888888876 5899999999999999999999999999999
Q ss_pred CCCCCceEEeccCccccccC-C---------CceEeC---CCCHHHHHHHHHHHh----cCCHHHHHHHHHHHHhhhhcC
Q 045882 469 VCPRTSMLVISEFIGCSPSL-S---------GAIRVN---PWDIDAVADALHDAI----TMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 469 ~~~~~g~lV~Se~~G~s~~l-~---------~a~~Vn---P~d~~~~A~ai~~aL----~m~~~e~~~r~~~~~~~v~~~ 531 (832)
+.|+|+|..+|+.+.+ + .|++|. |.|+++++++|.++| .+++.+++.+.++.++....+
T Consensus 542 ----G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~F 617 (725)
T 3nb0_A 542 ----GVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLL 617 (725)
T ss_dssp ----TCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGG
T ss_pred ----CCCEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 4579999999998766 2 378884 567777666666666 467777666666677777888
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q 045882 532 DVAYWAHSFMQDLERACRD 550 (832)
Q Consensus 532 ~~~~W~~~~l~~l~~~~~~ 550 (832)
++..-++.+++..+++...
T Consensus 618 SWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 618 DWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp BHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9888899888877776544
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-21 Score=213.67 Aligned_cols=283 Identities=10% Similarity=0.144 Sum_probs=198.9
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhc-C-CCeEEEEecCCCCChhhhhcCCchHHH-HHHHHhCCEEeecChhhHHH
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRF-H-RVKLGFFLHSPFPSSEIYRTLPVRNEI-LKALLNADLIGFHTFDYARH 268 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~-~-~~~ig~flH~PfP~~e~~r~lp~r~~i-l~~ll~~dligf~t~~~~~~ 268 (832)
++..+| |+|++|..+...++.++.++. . ++++.+.+|...+ ..+..-+....+ -..+-.+|.|...+....+.
T Consensus 95 l~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 170 (394)
T 2jjm_A 95 AQRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINE 170 (394)
T ss_dssp HHHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHH
T ss_pred HHHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 344566 899999877555555544333 3 6899999996421 111111222222 33456799999988776665
Q ss_pred HHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccc
Q 045882 269 FLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDI 345 (832)
Q Consensus 269 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~ 345 (832)
+.+ ..+. ..++.++|+|+|.+.|.+. . ...+++++ .++++|+++||+.+
T Consensus 171 ~~~----~~~~----------------~~~~~vi~ngv~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~G~~~~ 222 (394)
T 2jjm_A 171 THE----LVKP----------------NKDIQTVYNFIDERVYFKR----D----MTQLKKEYGISESEKILIHISNFRK 222 (394)
T ss_dssp HHH----HTCC----------------SSCEEECCCCCCTTTCCCC----C----CHHHHHHTTCC---CEEEEECCCCG
T ss_pred HHH----hhCC----------------cccEEEecCCccHHhcCCc----c----hHHHHHHcCCCCCCeEEEEeecccc
Confidence 542 2221 1246679999999877532 1 12344555 45789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 045882 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
.||+..+++|++.+.++ ++++ |+++|. +++.++ +++++++.+.. ..|.+++ . .+++.
T Consensus 223 ~Kg~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~----l~~~~~~~~l~------~~v~~~g-~--~~~~~ 279 (394)
T 2jjm_A 223 VKRVQDVVQAFAKIVTE-VDAK----LLLVGD-----GPEFCT----ILQLVKNLHIE------DRVLFLG-K--QDNVA 279 (394)
T ss_dssp GGTHHHHHHHHHHHHHS-SCCE----EEEECC-----CTTHHH----HHHHHHTTTCG------GGBCCCB-S--CSCTH
T ss_pred ccCHHHHHHHHHHHHhh-CCCE----EEEECC-----chHHHH----HHHHHHHcCCC------CeEEEeC-c--hhhHH
Confidence 99999999999999876 4444 887873 333333 44444433211 1244444 3 67899
Q ss_pred HHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHH
Q 045882 426 AYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAV 502 (832)
Q Consensus 426 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~ 502 (832)
.+|+.||++|+||..||||++++|||+|+ .|+|+|..+|..+.+. .|++++|.|++++
T Consensus 280 ~~~~~adv~v~ps~~e~~~~~~~EAma~G-------------------~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~l 340 (394)
T 2jjm_A 280 ELLAMSDLMLLLSEKESFGLVLLEAMACG-------------------VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGV 340 (394)
T ss_dssp HHHHTCSEEEECCSCCSCCHHHHHHHHTT-------------------CCEEEECCTTSTTTCCBTTTEEEECTTCHHHH
T ss_pred HHHHhCCEEEeccccCCCchHHHHHHhcC-------------------CCEEEecCCChHHHhhcCCceEEeCCCCHHHH
Confidence 99999999999999999999999999994 5799999999988883 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHHHHH
Q 045882 503 ADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLERACR 549 (832)
Q Consensus 503 A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 549 (832)
|++|.++++ .++.++...++.++++ ..++...+++.+++-++++..
T Consensus 341 a~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 341 ADQAIQLLK-DEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHHHH-CHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 999999998 4555666677778888 789999999999888876543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5e-22 Score=210.11 Aligned_cols=215 Identities=15% Similarity=0.114 Sum_probs=141.3
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCc----
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKS---- 656 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~---- 656 (832)
+|+||+||||++ .. .+++.+.++|++| +++|+.|+++|||+...+. .++ + ..++|++||+.++.....
T Consensus 2 li~~DlDGTLl~---~~-~i~~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~-~l~-~-~~~~i~~nGa~i~~~~~~~~~~ 73 (259)
T 3zx4_A 2 IVFTDLDGTLLD---ER-GELGPAREALERL-RALGVPVVPVTAKTRKEVE-ALG-L-EPPFIVENGGGLYLPRDWPVRA 73 (259)
T ss_dssp EEEECCCCCCSC---SS-SSCSTTHHHHHHH-HHTTCCEEEBCSSCHHHHH-HTT-C-CSSEEEGGGTEEEEETTCSSCC
T ss_pred EEEEeCCCCCcC---CC-cCCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHH-HcC-C-CCcEEEECCcEEEeCCCCcccc
Confidence 799999999999 56 8899999999999 6889999999999999998 332 2 467999999999887653
Q ss_pred ------cEEEcCcccchhHHHHHHHHHHHHHhcCCceE-Eeecc--------eeEEEEec--cCCCCC------CchhHH
Q 045882 657 ------EWETSTVAADFEWKRITEPVMKLYTEATDGSY-IEKKE--------TALVWHYQ--DAAPGF------GSCQAK 713 (832)
Q Consensus 657 ------~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~-ie~k~--------~~l~~~~~--~ad~~~------~~~~a~ 713 (832)
.+...... + .+.+.++++.+.+...-.+ ..... ..+..... .....+ ......
T Consensus 74 ~~~~~~~~~~~~~~-~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (259)
T 3zx4_A 74 GRPKGGYRVVSLAW-P---YRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVE 149 (259)
T ss_dssp SEEETTEEEEECSC-C---HHHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHH
T ss_pred cccCCceEEEEcCC-C---HHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHH
Confidence 12111111 1 2334444444332100000 00000 00000000 000000 000123
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCc--ceEEEEeCChhhHHHHHHcccccCCCC
Q 045882 714 ELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLP--DFVLCVGDDRSDEDMFESISQATYGSS 791 (832)
Q Consensus 714 el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~--d~vl~~GDd~ND~~Mf~~a~~~~~~~~ 791 (832)
++.+.+.. ..+.+..+..++||.|+ ++||.+++++++++ |+++ +++++|||+.||++||+.++.
T Consensus 150 ~~~~~l~~----~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~---~i~~~~~~~~~~GD~~nD~~m~~~ag~------ 215 (259)
T 3zx4_A 150 AVLEALEA----VGLEWTHGGRFYHAAKG-ADKGRAVARLRALW---PDPEEARFAVGLGDSLNDLPLFRAVDL------ 215 (259)
T ss_dssp HHHHHHHH----TTCEEEECSSSEEEESS-CCHHHHHHHHHHTC---SSHHHHTSEEEEESSGGGHHHHHTSSE------
T ss_pred HHHHHHHH----CCcEEEecCceEEEcCC-CCHHHHHHHHHHHh---CCCCCCceEEEEeCCHHHHHHHHhCCC------
Confidence 44444433 34666666667899999 99999999999999 9998 999999999999999999984
Q ss_pred CCCCCcEEEEEeCCc-ccccceEeC--ChhHHHHHHHHhhh
Q 045882 792 LPIAPEIFACTVGQK-PSKARYYLD--DEEDVLALLKGLAA 829 (832)
Q Consensus 792 ~~~~~~~f~v~vG~~-~s~A~y~l~--~~~eV~~~L~~l~~ 829 (832)
+|+||++ +.+|.|++. +.++|.++|+.+..
T Consensus 216 --------~va~~na~~~~~~~~~~~~~~~gv~~~~~~~~~ 248 (259)
T 3zx4_A 216 --------AVYVGRGDPPEGVLATPAPGPEGFRYAVERYLL 248 (259)
T ss_dssp --------EEECSSSCCCTTCEECSSCHHHHHHHHHHHHTT
T ss_pred --------eEEeCChhhcCCcEEeCCCCchHHHHHHHHHHH
Confidence 5667663 245667764 46789999998764
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=181.92 Aligned_cols=188 Identities=17% Similarity=0.163 Sum_probs=148.1
Q ss_pred eecCCCchHHH--hhcCCCChHHHHHHHHHHc--CCCEEEEEecccc-ccCCHHHHHHHHHHHH--HhCCCccCcEEEEE
Q 045882 302 LHVGIHMGRLE--SALNHPSSSIKVKEIREQF--KGKKVIVGVDDMD-IFKGISLKLLAMEQLL--KVHPELQGKLVLVQ 374 (832)
Q Consensus 302 ~P~GId~~~~~--~~~~~~~~~~~~~~l~~~~--~~~~vil~VdRld-~~KGi~~~l~A~~~ll--~~~P~~~~~vvLvq 374 (832)
+|+|||.+.|. +. .+...+....+++++ .++++|+++||+. +.||+..+++|+..+. +++|+++ |+.
T Consensus 2 ipngvd~~~f~~~~~--~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYL--TGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGS--CSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhcccccc--ccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 69999999987 43 112233355677777 3678999999999 9999999999999997 7777665 888
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
+|.. + .+..+++.+++++.+ .|+++.+.++.+++..+|+.||++|+||..||||++++|||+|
T Consensus 76 ~G~~-----~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~- 138 (200)
T 2bfw_A 76 IGKG-----D--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL- 138 (200)
T ss_dssp ECCB-----C--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT-
T ss_pred ECCC-----C--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHC-
Confidence 8742 2 123445555555543 3666477899999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccC--CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS 530 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (832)
+.|+|+|..+|..+.+ ..|++++|.|+++++++|.++++|.+++++...++.++++.+
T Consensus 139 ------------------G~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 139 ------------------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp ------------------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 4579999999988888 248999999999999999999997777777777777777654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-19 Score=197.72 Aligned_cols=243 Identities=12% Similarity=-0.029 Sum_probs=180.8
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHH
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFL 270 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl 270 (832)
+++..++ |+|++|.++...+. .+..+.+ .+.+|..++... .+|.+.+.+....+.+.
T Consensus 79 ~l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~ 135 (342)
T 2iuy_A 79 WLRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCG 135 (342)
T ss_dssp HHHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTT
T ss_pred HHHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHh
Confidence 3444566 89999998865543 3445788 899998876431 18888887765554442
Q ss_pred HHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHH
Q 045882 271 SCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGIS 350 (832)
Q Consensus 271 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~ 350 (832)
+ ..++.++|+|||.+.|.+... ...++++|+++||+.+.||+.
T Consensus 136 ~------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 136 G------------------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp C------------------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHH
T ss_pred c------------------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHH
Confidence 1 013456899999987753211 123567899999999999999
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
.+++|++++ +++ |+++|.+ ++.+ ++++++++.+ ..|.+ .+.++.+++..+|+.
T Consensus 179 ~li~a~~~~-----~~~----l~i~G~g-----~~~~----~l~~~~~~~~--------~~v~~-~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 179 EAAAFAHAC-----GRR----LVLAGPA-----WEPE----YFDEITRRYG--------STVEP-IGEVGGERRLDLLAS 231 (342)
T ss_dssp HHHHHHHHH-----TCC----EEEESCC-----CCHH----HHHHHHHHHT--------TTEEE-CCCCCHHHHHHHHHH
T ss_pred HHHHHHHhc-----CcE----EEEEeCc-----ccHH----HHHHHHHHhC--------CCEEE-eccCCHHHHHHHHHh
Confidence 999999886 444 8888743 3322 3344444443 12554 678999999999999
Q ss_pred cCcceeccc----------ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C----CceEeC
Q 045882 431 AECCIVNAV----------RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S----GAIRVN 495 (832)
Q Consensus 431 ADv~vvtS~----------~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~----~a~~Vn 495 (832)
||++|+||. .||||++++|||+|+ .|+|+|..+|..+.+ . .|++++
T Consensus 232 adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G-------------------~PvI~s~~~~~~e~~~~~~~~~g~~~~ 292 (342)
T 2iuy_A 232 AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSG-------------------TPVVGTGNGCLAEIVPSVGEVVGYGTD 292 (342)
T ss_dssp CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTT-------------------CCEEECCTTTHHHHGGGGEEECCSSSC
T ss_pred CCEEEECCcccccccccccccCccHHHHHHHhcC-------------------CCEEEcCCCChHHHhcccCCCceEEcC
Confidence 999999999 899999999999994 579999999998888 3 489999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHHHHH
Q 045882 496 PWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLERACR 549 (832)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 549 (832)
| |+++++++|.++++ .++.++++ ..++....++++++-++++.+
T Consensus 293 ~-d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 293 F-APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp C-CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred C-CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 9 99999999999987 22344444 667888888888888877654
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-20 Score=202.89 Aligned_cols=227 Identities=12% Similarity=0.107 Sum_probs=172.9
Q ss_pred hCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--
Q 045882 254 NADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-- 331 (832)
Q Consensus 254 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 331 (832)
.+|.|.+.+....+.|.+ .+|.. ..++.++|+|+|.+.|.+.... .....+++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~~~---------------~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQTE---------------PERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCCC---------------GGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHH----HhCCC---------------hhheEEecCCcCHHhcCcccch----hHHHHHHHHhCC
Confidence 589999988877776653 22322 1146679999999988754321 1234566666
Q ss_pred -CCCEEEEEeccccccCCHHHHHHHHHHHHHh-CCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCc
Q 045882 332 -KGKKVIVGVDDMDIFKGISLKLLAMEQLLKV-HPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGY 409 (832)
Q Consensus 332 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~ 409 (832)
.++++|+++||+.+.||+..+++|+..+.++ +|+++ |+.+|.+. . + ++++++++.+..
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~g~-----~-~----~~~~~~~~~~~~------ 252 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTL----LFVVGQDK-----P-R----KFEALAEKLGVR------ 252 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEE----EEEESSSC-----C-H----HHHHHHHHHTCG------
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceE----EEEEcCCC-----H-H----HHHHHHHHcCCC------
Confidence 4678999999999999999999999988776 46554 88888532 1 2 334444443311
Q ss_pred ccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-
Q 045882 410 EPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL- 488 (832)
Q Consensus 410 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l- 488 (832)
..|.+++ + .+++..+|+.||++|+||..||||++++|||+|+ .|+|+|..+|..+.+
T Consensus 253 ~~v~~~g-~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~e~i~ 310 (374)
T 2iw1_A 253 SNVHFFS-G--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG-------------------LPVLTTAVCGYAHYIA 310 (374)
T ss_dssp GGEEEES-C--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT-------------------CCEEEETTSTTTHHHH
T ss_pred CcEEECC-C--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC-------------------CCEEEecCCCchhhhc
Confidence 2366655 3 5789999999999999999999999999999994 579999999998888
Q ss_pred --CCceEeC-CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHH
Q 045882 489 --SGAIRVN-PWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 489 --~~a~~Vn-P~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (832)
..|++++ |.|+++++++|.++++ .++.++...++.++++.+++...|++.+.+-++.
T Consensus 311 ~~~~g~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 311 DANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHTCEEEECSSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred cCCceEEeCCCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3589997 9999999999999998 4566667777888999999888999988776653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-18 Score=183.10 Aligned_cols=224 Identities=18% Similarity=0.183 Sum_probs=154.8
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHH-------hhccCCCeEEEEcCCChhhHHHHhcCCC----CceEEEeC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRE-------LCGDSNNTTFIVSGRGKVSLGEWLAPCE----NLGIAAEH 646 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~-------L~~d~g~~V~I~SGR~~~~l~~~~~~l~----~l~liaen 646 (832)
..|+|+||+||||++ .. +++.+..++.+ ++.++|+.++++|||+...+..++..++ ...+++.+
T Consensus 21 ~~kliifDlDGTLld---s~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~ 95 (289)
T 3gyg_A 21 PQYIVFCDFDETYFP---HT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDL 95 (289)
T ss_dssp CSEEEEEETBTTTBC---SS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETT
T ss_pred CCeEEEEECCCCCcC---CC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecC
Confidence 579999999999998 33 77777777763 4468899999999999999998877543 24588888
Q ss_pred CEEEEeCC---Ccc----EEEcCcccchhHHHHHHHHHHHHHhcC-----CceEEeecceeEEEEeccCCCCCCchhHHH
Q 045882 647 GYYLRWTK---KSE----WETSTVAADFEWKRITEPVMKLYTEAT-----DGSYIEKKETALVWHYQDAAPGFGSCQAKE 714 (832)
Q Consensus 647 Ga~i~~~~---~~~----w~~~~~~~~~~w~~~v~~i~~~~~e~~-----~gs~ie~k~~~l~~~~~~ad~~~~~~~a~e 714 (832)
|..++... ... |...... . ...+.+.++++.+.+.. ..+..+.+...+.++|+..++. ...+
T Consensus 96 g~~i~~~~~ng~~~~~~~~~~~~~~-~-~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~----~~~~ 169 (289)
T 3gyg_A 96 GTEITYFSEHNFGQQDNKWNSRINE-G-FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEI----NDKK 169 (289)
T ss_dssp TTEEEECCSSSTTEECHHHHHHHHT-T-CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHH----HHHH
T ss_pred CceEEEEcCCCcEeecCchhhhhcc-c-CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccc----cchH
Confidence 88887633 211 1111110 1 12456777777776542 1122233444566777655331 1122
Q ss_pred HHHHHHHHhcCCCE--EEEEc---------CeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHc
Q 045882 715 LLDHLESVLANEPV--VVKRG---------YNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI 783 (832)
Q Consensus 715 l~~~l~~~l~~~~~--~v~~g---------~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a 783 (832)
....+...+...++ .+... ...+|+.|.+.+|+.+++++++.+ |++++++++|||+.||++|++.+
T Consensus 170 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~~~~~~~~~GDs~~D~~~~~~a 246 (289)
T 3gyg_A 170 NLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKY---NLNTERAIAFGDSGNDVRMLQTV 246 (289)
T ss_dssp HHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTTS
T ss_pred HHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHc---CCChhhEEEEcCCHHHHHHHHhC
Confidence 33344444443343 23332 278999999999999999999999 99999999999999999999999
Q ss_pred ccccCCCCCCCCCcEEEEEeCCc----ccccceEeCCh--hHHHHHHHHhhh
Q 045882 784 SQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDE--EDVLALLKGLAA 829 (832)
Q Consensus 784 ~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~--~eV~~~L~~l~~ 829 (832)
+ ++|.+|+. +..|+|++++. ++|.++|+++.+
T Consensus 247 g--------------~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~ 284 (289)
T 3gyg_A 247 G--------------NGYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIG 284 (289)
T ss_dssp S--------------EEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTC
T ss_pred C--------------cEEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHH
Confidence 8 46778774 45688988654 569999998764
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=162.91 Aligned_cols=161 Identities=9% Similarity=0.007 Sum_probs=120.3
Q ss_pred CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q 045882 334 KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVI 413 (832)
Q Consensus 334 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~ 413 (832)
+.+|+++||+.+.||+..+++|+.++ +++|++ .|+.+|. +++.+++ .+++.+.+. .+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~~----~l~i~G~-----g~~~~~~----~~~~~~~~~---------~v 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQDI----VLLLKGK-----GPDEKKI----KLLAQKLGV---------KA 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGGE----EEEEECC-----STTHHHH----HHHHHHHTC---------EE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCCe----EEEEEeC-----CccHHHH----HHHHHHcCC---------eE
Confidence 56899999999999999999999986 444554 4888874 3333334 444444322 23
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCc-eEEecc-CccccccC-CC
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTS-MLVISE-FIGCSPSL-SG 490 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g-~lV~Se-~~G~s~~l-~~ 490 (832)
.+ +.++.+++..+|+.||++|+||..||||++++|||+| +. |+|++. .+|..+.+ .+
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-------------------G~vPvi~~~~~~~~~~~~~~~ 118 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV-------------------GIVPVIANSPLSATRQFALDE 118 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT-------------------TCCEEEECCTTCGGGGGCSSG
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc-------------------CCCcEEeeCCCCchhhhccCC
Confidence 45 8899999999999999999999999999999999999 44 677744 55555555 45
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 491 AIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 491 a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
+.+++|.|+++++++|.++++ .++.++...++.++++..+++..+++
T Consensus 119 ~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 119 RSLFEPNNAKDLSAKIDWWLE-NKLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp GGEECTTCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHC------
T ss_pred ceEEcCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHCChhhhhc
Confidence 779999999999999999998 55666666667777777777665543
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=172.82 Aligned_cols=159 Identities=7% Similarity=0.005 Sum_probs=120.3
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccc-cccCCHHHHHHHHHHHHHhCCCccCcEEEEEEe
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDM-DIFKGISLKLLAMEQLLKVHPELQGKLVLVQIV 376 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 376 (832)
.+.++|+|+|.+.|.... ....+++.|++++|+ .+.||+..+++||.++.+++|+. .++.|+.+|
T Consensus 218 ~~~~i~~g~d~~~~~~~~-------------~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIN-------------DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTT-------------SCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhcccc-------------cccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 356789999988664210 012355688999996 68999999999999999998861 123488888
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecC
Q 045882 377 NPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQG 456 (832)
Q Consensus 377 ~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 456 (832)
.+... .+.+.. ..|. +.|.++.+|+.++|+.||+||+||..||||++++|||||
T Consensus 284 ~~~~~--------------------~~l~~~--~~v~-f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~--- 337 (413)
T 2x0d_A 284 EKHKD--------------------IALGKG--IHLN-SLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF--- 337 (413)
T ss_dssp SCCCC--------------------EEEETT--EEEE-EEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHT---
T ss_pred CCchh--------------------hhcCCc--CcEE-EcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhC---
Confidence 53210 111211 2344 456899999999999999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhcCC
Q 045882 457 TPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
+.|+|++ .+|+.+.+. +|++|+|.|++++|++|.++++.+
T Consensus 338 ----------------G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 338 ----------------GLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSF 380 (413)
T ss_dssp ----------------TCEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHT
T ss_pred ----------------CCcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCH
Confidence 3467774 567776662 489999999999999999999744
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.1e-15 Score=166.07 Aligned_cols=278 Identities=15% Similarity=0.108 Sum_probs=171.7
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHH-H-hCCEEeecChhhHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKAL-L-NADLIGFHTFDYAR 267 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~l-l-~~dligf~t~~~~~ 267 (832)
++++..+| |+|++|+.....++..+..+..++|+.+..|... +...+. ++...+.+.+ . .+|.+...+....+
T Consensus 80 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 80 PILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 34556677 8999998533444444444455788877766432 222222 2223333333 2 38999888876666
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCC-CchHHHhhcCCCChHHHHHHHHHHcC----CC-EEEEEec
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGI-HMGRLESALNHPSSSIKVKEIREQFK----GK-KVIVGVD 341 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~----~~-~vil~Vd 341 (832)
.|.+ .|+.. .++.++|+|+ |...+..... +.......+++++++ ++ .+++++|
T Consensus 155 ~l~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (384)
T 1vgv_A 155 NLLR-----ENVAD---------------SRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGH 213 (384)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECC
T ss_pred HHHH-----cCCCh---------------hhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeC
Confidence 5532 23321 1345678884 4333321100 000111234555532 33 5788999
Q ss_pred ccccc-CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCC
Q 045882 342 DMDIF-KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420 (832)
Q Consensus 342 Rld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~ 420 (832)
|+.+. ||+..+++|+.++.+++|+++ |+.++.+ ++ +++++++++++. ...|.+ .+.++
T Consensus 214 r~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~~---------~~~v~~-~g~~~ 272 (384)
T 1vgv_A 214 RRESFGRGFEEICHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILGH---------VKNVIL-IDPQE 272 (384)
T ss_dssp CBSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHTT---------CTTEEE-ECCCC
T ss_pred CccccchHHHHHHHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhhc---------CCCEEE-eCCCC
Confidence 99987 999999999999999998765 6654322 22 234445444321 123655 44678
Q ss_pred HHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccC-ccccccC--CCceEeCCC
Q 045882 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF-IGCSPSL--SGAIRVNPW 497 (832)
Q Consensus 421 ~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~s~~l--~~a~~VnP~ 497 (832)
.+++..+|+.||++|.|| |.+++|||+|+ .|+|+|.. +|+.+.+ ..|++|+|
T Consensus 273 ~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G-------------------~PvI~~~~~~~~~e~v~~g~g~lv~~- 327 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDS-----GGIQEEAPSLG-------------------KPVLVMRDTTERPEAVTAGTVRLVGT- 327 (384)
T ss_dssp HHHHHHHHHHCSEEEESS-----STGGGTGGGGT-------------------CCEEEESSCCSCHHHHHHTSEEEECS-
T ss_pred HHHHHHHHHhCcEEEECC-----cchHHHHHHcC-------------------CCEEEccCCCCcchhhhCCceEEeCC-
Confidence 899999999999999999 34589999994 46899987 6666555 35899988
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHH
Q 045882 498 DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540 (832)
Q Consensus 498 d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~ 540 (832)
|+++++++|.++++. ++.++.+.++.+++...+++.+.++.+
T Consensus 328 d~~~la~~i~~ll~d-~~~~~~~~~~~~~~~~~~~~~~i~~~~ 369 (384)
T 1vgv_A 328 DKQRIVEEVTRLLKD-ENEYQAMSRAHNPYGDGQACSRILEAL 369 (384)
T ss_dssp SHHHHHHHHHHHHHC-HHHHHHHHSSCCTTCCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhC-hHHHhhhhhccCCCcCCCHHHHHHHHH
Confidence 999999999999984 444444444455555445554444444
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=7e-16 Score=173.90 Aligned_cols=168 Identities=13% Similarity=0.049 Sum_probs=125.8
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEec
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVN 377 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 377 (832)
++.++|+|||.+.|.+.... ..+++++|++|||+.+.||+ ++.+.+++|+++ |+++|.
T Consensus 198 ~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~----l~ivG~ 255 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVT----FHVIGS 255 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEE----EEEESC
T ss_pred CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeE----EEEEeC
Confidence 67789999999998754221 12345899999999999999 555667788766 888873
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeee------
Q 045882 378 PARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYT------ 451 (832)
Q Consensus 378 p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~------ 451 (832)
+ + ++ +.+.. ..|.+ .|.++.+++.++|+.||+||+||..||||++.+|||
T Consensus 256 g-----~------------~~----~~~l~--~~V~f-~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eY 311 (406)
T 2hy7_A 256 G-----M------------GR----HPGYG--DNVIV-YGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQY 311 (406)
T ss_dssp S-----S------------CC----CTTCC--TTEEE-ECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHH
T ss_pred c-----h------------HH----hcCCC--CCEEE-cCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHH
Confidence 2 2 11 11211 12554 578999999999999999999999999999999999
Q ss_pred -eeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCceE-eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh
Q 045882 452 -ICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIR-VNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYIC 529 (832)
Q Consensus 452 -a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~-VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~ 529 (832)
||+ .|+|+|+. ... -.+|++ |+|.|++++|++|.++++.++ +++..
T Consensus 312 la~G-------------------~PVIas~~--v~~-~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~~~ 359 (406)
T 2hy7_A 312 DFFG-------------------LPAVCPNA--VVG-PYKSRFGYTPGNADSVIAAITQALEAPR----------VRYRQ 359 (406)
T ss_dssp HHHT-------------------CCEEEEGG--GTC-SCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCCSC
T ss_pred hhCC-------------------CcEEEehh--ccc-CcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhhhh
Confidence 994 46898887 111 134888 999999999999999998765 14456
Q ss_pred cCCHHHHHHHHHHH
Q 045882 530 SHDVAYWAHSFMQD 543 (832)
Q Consensus 530 ~~~~~~W~~~~l~~ 543 (832)
.+++...++++++-
T Consensus 360 ~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 360 CLNWSDTTDRVLDP 373 (406)
T ss_dssp CCBHHHHHHHHHCG
T ss_pred cCCHHHHHHHHHHh
Confidence 67777767666543
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-15 Score=166.71 Aligned_cols=274 Identities=13% Similarity=0.113 Sum_probs=171.8
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHH--hCCEEeecChhhHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALL--NADLIGFHTFDYAR 267 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll--~~dligf~t~~~~~ 267 (832)
++++..+| |+|++|......++..+..+..++++.++.|. +.+...+. ++...+.+.++ .+|.+...+....+
T Consensus 89 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 163 (375)
T 3beo_A 89 KVMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAG-LRTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSAT 163 (375)
T ss_dssp HHHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCC-CCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecc-cccccccC--CChhHhhhhHHhhhhheeeCCCHHHHH
Confidence 34455677 89999975433333333333446777765553 22222222 33344555433 38998888876666
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecC-CCchHHHhhcCCCChHHHHHHHHHHcC-CCEEEEEeccccc
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVG-IHMGRLESALNHPSSSIKVKEIREQFK-GKKVIVGVDDMDI 345 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~G-Id~~~~~~~~~~~~~~~~~~~l~~~~~-~~~vil~VdRld~ 345 (832)
.+.+ .|+.. .++.++|+| +|...+..... .. .++++++. ++.++++++|+.+
T Consensus 164 ~~~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~--~~----~~~~~~~~~~~~vl~~~gr~~~ 217 (375)
T 3beo_A 164 NLQK-----ENKDE---------------SRIFITGNTAIDALKTTVKET--YS----HPVLEKLGNNRLVLMTAHRREN 217 (375)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHCCSS--CC----CHHHHTTTTSEEEEEECCCGGG
T ss_pred HHHH-----cCCCc---------------ccEEEECChhHhhhhhhhhhh--hh----HHHHHhccCCCeEEEEeccccc
Confidence 5532 23321 135678999 88777653210 11 12344443 4456789999998
Q ss_pred c-CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 045882 346 F-KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEK 424 (832)
Q Consensus 346 ~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el 424 (832)
. ||+..+++|+.++.+++|+++ ++.... ++ .+++++++++++. ...|.+ .+.++..++
T Consensus 218 ~~K~~~~li~a~~~l~~~~~~~~----~i~~~g------~~-~~~~~~~~~~~~~---------~~~v~~-~g~~~~~~~ 276 (375)
T 3beo_A 218 LGEPMRNMFRAIKRLVDKHEDVQ----VVYPVH------MN-PVVRETANDILGD---------YGRIHL-IEPLDVIDF 276 (375)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTEE----EEEECC------SC-HHHHHHHHHHHTT---------CTTEEE-ECCCCHHHH
T ss_pred chhHHHHHHHHHHHHHhhCCCeE----EEEeCC------CC-HHHHHHHHHHhhc---------cCCEEE-eCCCCHHHH
Confidence 6 999999999999999898765 443221 11 2344555544221 113555 457888999
Q ss_pred HHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccC-ccccccC-C-CceEeCCCCHHH
Q 045882 425 TAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF-IGCSPSL-S-GAIRVNPWDIDA 501 (832)
Q Consensus 425 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~s~~l-~-~a~~VnP~d~~~ 501 (832)
..+|+.||++|.|| |.+++|||+|+ .|+|+|.. +|..+.+ . .|++|+| |+++
T Consensus 277 ~~~~~~ad~~v~~s-----g~~~lEA~a~G-------------------~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~ 331 (375)
T 3beo_A 277 HNVAARSYLMLTDS-----GGVQEEAPSLG-------------------VPVLVLRDTTERPEGIEAGTLKLAGT-DEET 331 (375)
T ss_dssp HHHHHTCSEEEECC-----HHHHHHHHHHT-------------------CCEEECSSCCSCHHHHHTTSEEECCS-CHHH
T ss_pred HHHHHhCcEEEECC-----CChHHHHHhcC-------------------CCEEEecCCCCCceeecCCceEEcCC-CHHH
Confidence 99999999999999 56699999994 46888864 7766655 3 4788887 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHH
Q 045882 502 VADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541 (832)
Q Consensus 502 ~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 541 (832)
+|++|.++++. ++.++...++.+++...+++.+.++.+.
T Consensus 332 la~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 370 (375)
T 3beo_A 332 IFSLADELLSD-KEAHDKMSKASNPYGDGRASERIVEAIL 370 (375)
T ss_dssp HHHHHHHHHHC-HHHHHHHCCCCCTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHhC-hHhHhhhhhcCCCCCCCcHHHHHHHHHH
Confidence 99999999984 4444444444455555555555454443
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.5e-15 Score=174.08 Aligned_cols=172 Identities=12% Similarity=0.039 Sum_probs=134.3
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
+.+++++++|+.+ ||+..+++||.++++++|+++ |+++|. +++..+ ++++++.+.+.. ...|
T Consensus 375 ~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~G~----~g~~~~----~l~~~~~~~~l~-----~~~v 436 (568)
T 2vsy_A 375 EQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLLSG----PGEADA----RLRAFAHAQGVD-----AQRL 436 (568)
T ss_dssp TTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEECC----STTHHH----HHHHHHHHTTCC-----GGGE
T ss_pred CCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEecC----CHHHHH----HHHHHHHHcCCC-----hhHE
Confidence 4456779999999 999999999999999999876 888872 334433 444444443211 0125
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEe-------ccCc---
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVI-------SEFI--- 482 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~-------Se~~--- 482 (832)
+ +.|.++.+++..+|+.|||||+||.+ |||++++|||+|+ .|+|+ |..+
T Consensus 437 ~-~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G-------------------~Pvv~~~g~~~~s~~~~~~ 495 (568)
T 2vsy_A 437 V-FMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG-------------------CPVLTTPGETFAARVAGSL 495 (568)
T ss_dssp E-EECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT-------------------CCEEBCCCSSGGGSHHHHH
T ss_pred E-eeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC-------------------CCEEeccCCCchHHHHHHH
Confidence 4 45689999999999999999999999 9999999999994 46899 9988
Q ss_pred ----cccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh---hcCCHHHHHHHHHHHHHHHHHhh
Q 045882 483 ----GCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI---CSHDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 483 ----G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v---~~~~~~~W~~~~l~~l~~~~~~~ 551 (832)
|+.+.+.+ |+++++++|.++++. ++.+....++.++.+ ..++...+++.+.+-+++..+.+
T Consensus 496 l~~~g~~e~v~~-------~~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 496 NHHLGLDEMNVA-------DDAAFVAKAVALASD-PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRH 563 (568)
T ss_dssp HHHHTCGGGBCS-------SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCChhhhcC-------CHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 88776643 899999999999984 455555566677777 66899999999988887776543
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.60 E-value=7e-16 Score=153.13 Aligned_cols=142 Identities=15% Similarity=0.120 Sum_probs=112.1
Q ss_pred CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCccc
Q 045882 332 KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEP 411 (832)
Q Consensus 332 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~p 411 (832)
.++++|+++||+.+.||+..+++|++++ |+++ |+.+|... +.+ ++.+++.++..... ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~----~l~~~~~~~~~~l~----~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGD----HAERYARKIMKIAP----DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTS----THHHHHHHHHHHSC----TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHH----HHHHHHHhhhcccC----Cc
Confidence 4678999999999999999999999876 6665 88888533 212 23333332111111 12
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC--
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-- 489 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-- 489 (832)
|.+ .+.++.+++..+|+.||++|+||..||||++++|||+|+ .|+|+|..+|..+.+.
T Consensus 80 v~~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~e~i~~~ 139 (177)
T 2f9f_A 80 VKF-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG-------------------KPVIAVNEGGFKETVINE 139 (177)
T ss_dssp EEE-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT-------------------CCEEEESSHHHHHHCCBT
T ss_pred EEE-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC-------------------CcEEEeCCCCHHHHhcCC
Confidence 554 568999999999999999999999999999999999994 5799999988888873
Q ss_pred -CceEeCCCCHHHHHHHHHHHhcCCHH
Q 045882 490 -GAIRVNPWDIDAVADALHDAITMSDV 515 (832)
Q Consensus 490 -~a~~VnP~d~~~~A~ai~~aL~m~~~ 515 (832)
.|+++ |.|+++++++|.++++.++.
T Consensus 140 ~~g~~~-~~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 140 KTGYLV-NADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp TTEEEE-CSCHHHHHHHHHHHHHCTTT
T ss_pred CccEEe-CCCHHHHHHHHHHHHhCHHH
Confidence 48899 99999999999999987763
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.50 E-value=8.3e-14 Score=154.31 Aligned_cols=243 Identities=14% Similarity=0.149 Sum_probs=151.7
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHH--HhCCEEeecChhhHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKAL--LNADLIGFHTFDYAR 267 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~l--l~~dligf~t~~~~~ 267 (832)
++++..+| |+|++|++....++..+..+..++|+. ..|.++.+...++ ++.....+.+ ..+|.+...+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 44556677 899999886655654444444567875 4565543322222 2223333332 237888777766665
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecC-CCchHHHhhcCCCChHHHHHHHHHHcC-CCEEEEEeccccc
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVG-IHMGRLESALNHPSSSIKVKEIREQFK-GKKVIVGVDDMDI 345 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~G-Id~~~~~~~~~~~~~~~~~~~l~~~~~-~~~vil~VdRld~ 345 (832)
.|.+ .|+.. .++.++|++ +|...+... ..+++++++ ++.++++++|+..
T Consensus 160 ~l~~-----~g~~~---------------~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 160 NLLK-----EGKRE---------------EGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRREN 210 (376)
T ss_dssp HHHT-----TTCCG---------------GGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGG
T ss_pred HHHH-----cCCCc---------------ceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccc
Confidence 5532 13221 134456664 453333211 011222333 4567788999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 045882 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
.||+..+++|++++.+++|+++ ++.++. +++ +++++++++++. ...|.++ +.++..++.
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~~---------~~~v~~~-g~~g~~~~~ 269 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLKG---------VRNFVLL-DPLEYGSMA 269 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHTT---------CTTEEEE-CCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhcc---------CCCEEEE-CCCCHHHHH
Confidence 9999999999999999899875 665432 222 234444444321 1236554 467788999
Q ss_pred HHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc-CccccccC--CCceEeCCCCHHHH
Q 045882 426 AYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE-FIGCSPSL--SGAIRVNPWDIDAV 502 (832)
Q Consensus 426 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~s~~l--~~a~~VnP~d~~~~ 502 (832)
.+|+.||++|.+| +|+ .+|||+|+. |+|++. .+|..+.+ ..|++|+ .|++++
T Consensus 270 ~~~~~ad~~v~~S--~g~---~lEA~a~G~-------------------PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~l 324 (376)
T 1v4v_A 270 ALMRASLLLVTDS--GGL---QEEGAALGV-------------------PVVVLRNVTERPEGLKAGILKLAG-TDPEGV 324 (376)
T ss_dssp HHHHTEEEEEESC--HHH---HHHHHHTTC-------------------CEEECSSSCSCHHHHHHTSEEECC-SCHHHH
T ss_pred HHHHhCcEEEECC--cCH---HHHHHHcCC-------------------CEEeccCCCcchhhhcCCceEECC-CCHHHH
Confidence 9999999999999 665 779999944 577764 45555544 3478885 599999
Q ss_pred HHHHHHHhcC
Q 045882 503 ADALHDAITM 512 (832)
Q Consensus 503 A~ai~~aL~m 512 (832)
|++|.++|+.
T Consensus 325 a~~i~~ll~d 334 (376)
T 1v4v_A 325 YRVVKGLLEN 334 (376)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhC
Confidence 9999999984
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-13 Score=151.60 Aligned_cols=259 Identities=14% Similarity=0.036 Sum_probs=161.3
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~F 269 (832)
++++..+| |+|++|.....+ +..+..+..++|+.+..|..+|.. ...++ .-.+|.+...+...
T Consensus 90 ~~l~~~~p--Dvv~~~~~~~~~-~~~~~~~~~~~p~v~~~~~~~~~~--------~~~~~--~~~~d~v~~~~~~~---- 152 (364)
T 1f0k_A 90 AIMKAYKP--DVVLGMGGYVSG-PGGLAAWSLGIPVVLHEQNGIAGL--------TNKWL--AKIATKVMQAFPGA---- 152 (364)
T ss_dssp HHHHHHCC--SEEEECSSTTHH-HHHHHHHHTTCCEEEEECSSSCCH--------HHHHH--TTTCSEEEESSTTS----
T ss_pred HHHHhcCC--CEEEEeCCcCch-HHHHHHHHcCCCEEEEecCCCCcH--------HHHHH--HHhCCEEEecChhh----
Confidence 34455677 899999755333 333333344688888888766531 01111 01245443322110
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCE-EEEEeccccccCC
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKK-VIVGVDDMDIFKG 348 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~-vil~VdRld~~KG 348 (832)
+ . ++.++|+|+|...+.. +.. ..++. .-.+++ +++.+||+.+.||
T Consensus 153 ----------------------~-~---~~~~i~n~v~~~~~~~----~~~---~~~~~-~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 153 ----------------------F-P---NAEVVGNPVRTDVLAL----PLP---QQRLA-GREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp ----------------------S-S---SCEECCCCCCHHHHTS----CCH---HHHHT-TCCSSEEEEEECTTTCCHHH
T ss_pred ----------------------c-C---CceEeCCccchhhccc----chh---hhhcc-cCCCCcEEEEEcCchHhHHH
Confidence 1 1 2457899999887642 111 11111 113445 5666789999999
Q ss_pred HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 045882 349 ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYY 428 (832)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly 428 (832)
+..+++|++++.+ ++.++.+++ +++ .+ ++.+++++.+ . ..|.++ +.+ +++..+|
T Consensus 199 ~~~li~a~~~l~~-------~~~~l~i~G----~~~-~~----~l~~~~~~~~----~---~~v~~~-g~~--~~~~~~~ 252 (364)
T 1f0k_A 199 NQTMPQVAAKLGD-------SVTIWHQSG----KGS-QQ----SVEQAYAEAG----Q---PQHKVT-EFI--DDMAAAY 252 (364)
T ss_dssp HHHHHHHHHHHGG-------GEEEEEECC----TTC-HH----HHHHHHHHTT----C---TTSEEE-SCC--SCHHHHH
T ss_pred HHHHHHHHHHhcC-------CcEEEEEcC----Cch-HH----HHHHHHhhcC----C---CceEEe-cch--hhHHHHH
Confidence 9999999998743 233433332 222 23 3334444332 1 135554 455 7899999
Q ss_pred HhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccc-------cC---CCceEeCCCC
Q 045882 429 ALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSP-------SL---SGAIRVNPWD 498 (832)
Q Consensus 429 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~-------~l---~~a~~VnP~d 498 (832)
+.||++|+|| | +++++|||+|+ .|+|+|..+|... .+ ..|++++|.|
T Consensus 253 ~~ad~~v~~s---g-~~~~~EAma~G-------------------~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d 309 (364)
T 1f0k_A 253 AWADVVVCRS---G-ALTVSEIAAAG-------------------LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQ 309 (364)
T ss_dssp HHCSEEEECC---C-HHHHHHHHHHT-------------------CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGG
T ss_pred HhCCEEEECC---c-hHHHHHHHHhC-------------------CCEEEeeCCCCchhHHHHHHHHHhCCcEEEecccc
Confidence 9999999999 4 89999999994 4799999987632 33 2489999988
Q ss_pred --HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 045882 499 --IDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 499 --~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (832)
++++|++|.++ +++.++...++.++++..+++..-++.+++.+++..+.|
T Consensus 310 ~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 310 LSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp CCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred CCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999987 566666667777888877777777777766666554444
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.9e-13 Score=149.75 Aligned_cols=249 Identities=11% Similarity=-0.002 Sum_probs=154.0
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHH-HHHhCCEEeecChhhHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILK-ALLNADLIGFHTFDYARH 268 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~-~ll~~dligf~t~~~~~~ 268 (832)
++++..+| |+|+++.++++ |.++.... . ++.+..+. +.. +. +.+ .+-.+|.|.+++....+.
T Consensus 105 ~~l~~~~p--Div~~~~~~~~--~~~~~~~~-~-p~~~~~~~-~~~---------~~-~~~~~~~~~d~ii~~S~~~~~~ 167 (374)
T 2xci_A 105 RFEELSKP--KALIVVEREFW--PSLIIFTK-V-PKILVNAY-AKG---------SL-IEKILSKKFDLIIMRTQEDVEK 167 (374)
T ss_dssp HHHHHHCC--SEEEEESCCCC--HHHHHHCC-S-CEEEEEEC-CCC---------CH-HHHHHHTTCSEEEESCHHHHHH
T ss_pred HHHHHhCC--CEEEEECccCc--HHHHHHHh-C-CEEEEEee-cCc---------hH-HHHHHHHhCCEEEECCHHHHHH
Confidence 34566788 89988877765 34443322 1 44433332 211 11 222 234589999999888776
Q ss_pred HHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCC
Q 045882 269 FLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKG 348 (832)
Q Consensus 269 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KG 348 (832)
|.+ +|+ . +|.++|+|. |.... +. ++.+. +++++++++ ..||
T Consensus 168 l~~-----~g~----------------~-ki~vi~n~~----f~~~~--~~--------~~~l~-~~vi~~~~~--~~k~ 208 (374)
T 2xci_A 168 FKT-----FGA----------------K-RVFSCGNLK----FICQK--GK--------GIKLK-GEFIVAGSI--HTGE 208 (374)
T ss_dssp HHT-----TTC----------------C-SEEECCCGG----GCCCC--CS--------CCCCS-SCEEEEEEE--CGGG
T ss_pred HHH-----cCC----------------C-eEEEcCCCc----cCCCc--Ch--------hhhhc-CCEEEEEeC--CCch
Confidence 642 121 1 345567652 22110 10 01111 257777776 4689
Q ss_pred HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC--CCCcccEEEecCCCCHHHHHH
Q 045882 349 ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG--VPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~--~~~~~pv~~~~~~v~~~el~a 426 (832)
+..+++||.++.+++|+++ |+++| ++++.. +++++++++.+..+. ..+...| ++.+. .+|+..
T Consensus 209 ~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~---~~l~~~~~~~gl~~~~~~~~~~~v-~~~~~--~~dl~~ 273 (374)
T 2xci_A 209 VEIILKAFKEIKKTYSSLK----LILVP-----RHIENA---KIFEKKARDFGFKTSFFENLEGDV-ILVDR--FGILKE 273 (374)
T ss_dssp HHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGH---HHHHHHHHHTTCCEEETTCCCSSE-EECCS--SSCHHH
T ss_pred HHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHH---HHHHHHHHHCCCceEEecCCCCcE-EEECC--HHHHHH
Confidence 9999999999999999887 88887 234321 234444444432211 0000124 34432 478999
Q ss_pred HHHhcCcceecc-cccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEec-cCccccccC----CCceEeCCCCHH
Q 045882 427 YYALAECCIVNA-VRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS-EFIGCSPSL----SGAIRVNPWDID 500 (832)
Q Consensus 427 ly~~ADv~vvtS-~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~s~~l----~~a~~VnP~d~~ 500 (832)
+|+.||+++++| ..|++|++++|||||+. |+|++ +..|+.+.+ .+|.++.|.|++
T Consensus 274 ~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~-------------------PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~ 334 (374)
T 2xci_A 274 LYPVGKIAIVGGTFVNIGGHNLLEPTCWGI-------------------PVIYGPYTHKVNDLKEFLEKEGAGFEVKNET 334 (374)
T ss_dssp HGGGEEEEEECSSSSSSCCCCCHHHHTTTC-------------------CEEECSCCTTSHHHHHHHHHTTCEEECCSHH
T ss_pred HHHhCCEEEECCcccCCCCcCHHHHHHhCC-------------------CEEECCCccChHHHHHHHHHCCCEEEeCCHH
Confidence 999999988876 45778999999999944 57765 556666644 357888899999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhhhc
Q 045882 501 AVADALHDAITMSDVEKQLRHEKHYRYICS 530 (832)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (832)
++|++|.++|+. +.++.+.++.++++.+
T Consensus 335 ~La~ai~~ll~d--~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 335 ELVTKLTELLSV--KKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHHS--CCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHHHHHHh
Confidence 999999999983 4555555566666544
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.5e-12 Score=137.48 Aligned_cols=214 Identities=12% Similarity=0.097 Sum_probs=123.2
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcC---CChhhHHHHhcCCC----CceEEEeCCEEE
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSG---RGKVSLGEWLAPCE----NLGIAAEHGYYL 650 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~----~l~liaenGa~i 650 (832)
+.|+|+||+||||++ . +.+++++.++|++| +++|+.|+|+|| |+...+.+.+..++ ..++++.||+.+
T Consensus 5 ~~kli~~DlDGTLl~---~-~~~~~~~~~ai~~l-~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 79 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYN---G-TEKIEEACEFVRTL-KDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATA 79 (266)
T ss_dssp CCSEEEEECSSSTTC---H-HHHHHHHHHHHHHH-HHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEeCcCceEe---C-CEeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHHH
Confidence 478999999999998 3 55678999999999 689999999988 66677777766543 123566555543
Q ss_pred EeC-----CCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHH---
Q 045882 651 RWT-----KKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESV--- 722 (832)
Q Consensus 651 ~~~-----~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~--- 722 (832)
..- ....+.. .. +.+...++.+ |..+........+.. .+.........+....+...
T Consensus 80 ~~~~~~~~~~~~~~~----~~----~~~~~~~~~~-----g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~ 144 (266)
T 3pdw_A 80 QHIAQQKKDASVYVI----GE----EGIRQAIEEN-----GLTFGGENADFVVVG--IDRSITYEKFAVGCLAIRNGARF 144 (266)
T ss_dssp HHHHHHCTTCEEEEE----SC----HHHHHHHHHT-----TCEECCTTCSEEEEC--CCTTCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHhhCCCCEEEEE----eC----hhHHHHHHHc-----CCccCCCCCCEEEEe--CCCCCCHHHHHHHHHHHHCCCeE
Confidence 211 0111110 00 1122222211 222211111111111 11111111112222222110
Q ss_pred -hcCCCEEEEEcC----------------eEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHcc
Q 045882 723 -LANEPVVVKRGY----------------NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESIS 784 (832)
Q Consensus 723 -l~~~~~~v~~g~----------------~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~ 784 (832)
..+......... ...|+.+.+.+|+.+++.+++++ |++++++++|||+ .||++|++.+|
T Consensus 145 i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~~~~aG 221 (266)
T 3pdw_A 145 ISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVL---GTDVSETLMVGDNYATDIMAGINAG 221 (266)
T ss_dssp EESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred EEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHc---CCChhhEEEECCCcHHHHHHHHHCC
Confidence 001010000000 12456788999999999999999 9999999999999 89999999999
Q ss_pred cccCCCCCCCCCcEEEEEeCCc-----cc---ccceEeCChhHHHHHHH
Q 045882 785 QATYGSSLPIAPEIFACTVGQK-----PS---KARYYLDDEEDVLALLK 825 (832)
Q Consensus 785 ~~~~~~~~~~~~~~f~v~vG~~-----~s---~A~y~l~~~~eV~~~L~ 825 (832)
.. ++.|..|.. +. .|+|++++..++.+-.+
T Consensus 222 ~~-----------~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~ 259 (266)
T 3pdw_A 222 MD-----------TLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIE 259 (266)
T ss_dssp CE-----------EEEECCC------CCTTSCCCSEEESSGGGGHHHHH
T ss_pred Ce-----------EEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhh
Confidence 74 134444431 22 59999999988876554
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.4e-12 Score=126.95 Aligned_cols=137 Identities=15% Similarity=0.140 Sum_probs=104.2
Q ss_pred CcEEEEEecCCCcCCCCCC---C----CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEE
Q 045882 578 SRRAIFLDYDGTVVPHHAL---I----KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYL 650 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~---~----~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i 650 (832)
..|+|+||+||||++.... . ..+++++.++|++| ++.|+.++|+|||+...+...+..++-..+. +|
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~--~~--- 80 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKML-MDADIQVAVLSGRDSPILRRRIADLGIKLFF--LG--- 80 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HHTTCEEEEEESCCCHHHHHHHHHHTCCEEE--ES---
T ss_pred CCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHH-HHCCCeEEEEeCCCcHHHHHHHHHcCCceee--cC---
Confidence 4689999999999983210 1 13567889999999 6789999999999999888887754321111 01
Q ss_pred EeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEE
Q 045882 651 RWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVV 730 (832)
Q Consensus 651 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v 730 (832)
T Consensus 81 -------------------------------------------------------------------------------- 80 (180)
T 1k1e_A 81 -------------------------------------------------------------------------------- 80 (180)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----
Q 045882 731 KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---- 806 (832)
Q Consensus 731 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---- 806 (832)
..+|+.+++.+++.+ |++++.+++|||+.||++|++.++. ++.+++.
T Consensus 81 ------------~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~~ 131 (180)
T 1k1e_A 81 ------------KLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGT--------------SFAVADAPIYV 131 (180)
T ss_dssp ------------CSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHH
T ss_pred ------------CCCcHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC--------------eEEeCCccHHH
Confidence 057999999999999 9999999999999999999999985 4556653
Q ss_pred ccccceEeCC--hhHHH-HHHHHhhh
Q 045882 807 PSKARYYLDD--EEDVL-ALLKGLAA 829 (832)
Q Consensus 807 ~s~A~y~l~~--~~eV~-~~L~~l~~ 829 (832)
+..|+|++++ ..+|. .+++.+..
T Consensus 132 ~~~ad~v~~~~~~~g~~~~~~~~~l~ 157 (180)
T 1k1e_A 132 KNAVDHVLSTHGGKGAFREMSDMILQ 157 (180)
T ss_dssp HTTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 4678999865 45666 66665543
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.36 E-value=4.3e-11 Score=134.24 Aligned_cols=251 Identities=14% Similarity=0.120 Sum_probs=157.3
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHH--HhCCEEeecChhhHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKAL--LNADLIGFHTFDYAR 267 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~l--l~~dligf~t~~~~~ 267 (832)
++++..+| |+|++|+.-...+|..+..+..++|++. +|.+..+...+. |+++++.+-+ ..+|++...+....+
T Consensus 105 ~~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~ 179 (396)
T 3dzc_A 105 QVLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRA 179 (396)
T ss_dssp HHHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHH
T ss_pred HHHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 44566788 8999998777767766666666888763 444443322222 4556666655 357998888888877
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeec-CCCchHHHhhcCCCChHHHHHHHHHHcC----CCE-EEEEec
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHV-GIHMGRLESALNHPSSSIKVKEIREQFK----GKK-VIVGVD 341 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~-GId~~~~~~~~~~~~~~~~~~~l~~~~~----~~~-vil~Vd 341 (832)
+|.+ .|+.. + +|.+.++ ++|...+..... ........+++++++ +++ +++...
T Consensus 180 ~l~~-----~G~~~--~-------------ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~h 238 (396)
T 3dzc_A 180 NLLQ-----ENYNA--E-------------NIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGH 238 (396)
T ss_dssp HHHH-----TTCCG--G-------------GEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECS
T ss_pred HHHH-----cCCCc--C-------------cEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEEC
Confidence 7753 24321 1 2333443 455433321100 000011356677653 344 455676
Q ss_pred cccc-cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCC
Q 045882 342 DMDI-FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420 (832)
Q Consensus 342 Rld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~ 420 (832)
|... .||+..+++|+.++.+++|+++ +|.++.+ ++ .+++.+++.+ +. ...|.+ .++++
T Consensus 239 R~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~---~~~~~l~~~~-------~~--~~~v~~-~~~lg 297 (396)
T 3dzc_A 239 RRESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NP---NVREPVNKLL-------KG--VSNIVL-IEPQQ 297 (396)
T ss_dssp CBCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHT-------TT--CTTEEE-ECCCC
T ss_pred CcccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----Ch---HHHHHHHHHH-------cC--CCCEEE-eCCCC
Confidence 7654 4889999999999999999865 6654322 12 2334444331 11 123554 45788
Q ss_pred HHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEec-cCccccccC--CCceEeCCC
Q 045882 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS-EFIGCSPSL--SGAIRVNPW 497 (832)
Q Consensus 421 ~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~s~~l--~~a~~VnP~ 497 (832)
..++..+|+.||++|.+| | |++ .||++|+. |+|++ +.++..+.+ ..+++|.+
T Consensus 298 ~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~-------------------PvV~~~~~~~~~e~v~~G~~~lv~~- 352 (396)
T 3dzc_A 298 YLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGK-------------------PVLVMRETTERPEAVAAGTVKLVGT- 352 (396)
T ss_dssp HHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTC-------------------CEEECCSSCSCHHHHHHTSEEECTT-
T ss_pred HHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCC-------------------CEEEccCCCcchHHHHcCceEEcCC-
Confidence 889999999999999998 6 555 89999954 57777 566655444 33567754
Q ss_pred CHHHHHHHHHHHhcC
Q 045882 498 DIDAVADALHDAITM 512 (832)
Q Consensus 498 d~~~~A~ai~~aL~m 512 (832)
|.++++++|.++|+.
T Consensus 353 d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 353 NQQQICDALSLLLTD 367 (396)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHcC
Confidence 899999999999974
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=7e-13 Score=140.11 Aligned_cols=211 Identities=13% Similarity=0.077 Sum_probs=124.8
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEc---CCChhhHHHHhcCCCC----ceEEEeCCEE
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVS---GRGKVSLGEWLAPCEN----LGIAAEHGYY 649 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~~----l~liaenGa~ 649 (832)
.+.+.|+||+||||++ . ..+++.+.++|++| ++.|+.|+++| ||+...+.+.+..++. ..++++||+.
T Consensus 15 ~~~~~v~~DlDGTLl~---~-~~~~~~~~~~l~~l-~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~ 89 (271)
T 1vjr_A 15 DKIELFILDMDGTFYL---D-DSLLPGSLEFLETL-KEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEIT 89 (271)
T ss_dssp GGCCEEEECCBTTTEE---T-TEECTTHHHHHHHH-HHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred cCCCEEEEcCcCcEEe---C-CEECcCHHHHHHHH-HHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHH
Confidence 3568999999999998 3 55778899999999 68899999999 9999999888876531 2367776654
Q ss_pred EEeCCC----ccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcC
Q 045882 650 LRWTKK----SEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLAN 725 (832)
Q Consensus 650 i~~~~~----~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~ 725 (832)
+..... ....... . ..+...++.+ |..+........+... +.......+.+.+..+ ...
T Consensus 90 ~~~~~~~~~~~~~~~~~---~----~~~~~~l~~~-----g~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l---~~~ 152 (271)
T 1vjr_A 90 AEHMLKRFGRCRIFLLG---T----PQLKKVFEAY-----GHVIDEENPDFVVLGF--DKTLTYERLKKACILL---RKG 152 (271)
T ss_dssp HHHHHHHHCSCEEEEES---C----HHHHHHHHHT-----TCEECSSSCSEEEECC--CTTCCHHHHHHHHHHH---TTT
T ss_pred HHHHHHhCCCCeEEEEc---C----HHHHHHHHHc-----CCccCCCCCCEEEEeC--CCCcCHHHHHHHHHHH---HCC
Confidence 322110 0000000 0 1111121111 1111111101111111 1111111122222222 011
Q ss_pred CCEEEEEcC------------------------eEEEE-EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHH
Q 045882 726 EPVVVKRGY------------------------NIVEV-KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDM 779 (832)
Q Consensus 726 ~~~~v~~g~------------------------~~vEV-~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~M 779 (832)
..+ +.++. ...|. .+.+.+|+.+++.+++.+ |++++++++|||+ .||++|
T Consensus 153 ~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l---gi~~~e~i~iGD~~~nDi~~ 228 (271)
T 1vjr_A 153 KFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKF---GVPKERMAMVGDRLYTDVKL 228 (271)
T ss_dssp CEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCHHHHHHH
T ss_pred CeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHh---CCCCceEEEECCCcHHHHHH
Confidence 111 11111 12345 788999999999999999 9999999999999 599999
Q ss_pred HHHcccccCCCCCCCCCcEEEEEeCCcc--------cccceEeCChhHHHHHH
Q 045882 780 FESISQATYGSSLPIAPEIFACTVGQKP--------SKARYYLDDEEDVLALL 824 (832)
Q Consensus 780 f~~a~~~~~~~~~~~~~~~f~v~vG~~~--------s~A~y~l~~~~eV~~~L 824 (832)
++.+|.. ++.|.-|... ..+.|++++..++.++|
T Consensus 229 a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 229 GKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp HHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred HHHcCCe-----------EEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 9999974 1233334321 26889999999888766
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.2e-13 Score=142.94 Aligned_cols=218 Identities=14% Similarity=0.102 Sum_probs=123.1
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEc---CCChhhHHHHhcCCC----CceEEEeCCEEE
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVS---GRGKVSLGEWLAPCE----NLGIAAEHGYYL 650 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~----~l~liaenGa~i 650 (832)
+.|+|+||+||||++.......+++.+.++++.+ ++.|+.++++| ||+...+.+.+..++ ...+++.+|+.+
T Consensus 11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l-~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 89 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARL-KRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVTAPAPAAC 89 (271)
T ss_dssp TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHH-HHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCGGGEECHHHHHH
T ss_pred cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHH-HHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCHHHeecHHHHHH
Confidence 4789999999999983100445777888889998 68899999999 999998888776542 123555444422
Q ss_pred EeCC-CccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE
Q 045882 651 RWTK-KSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVV 729 (832)
Q Consensus 651 ~~~~-~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~ 729 (832)
.... ...+...... +.+.++++...+. .....+. ...+..+......+.+..+.+. ....+
T Consensus 90 ~~~~~~~~~~~~~~~------~~~~~~l~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~-~~~~~- 151 (271)
T 2x4d_A 90 QILKERGLRPYLLIH------DGVRSEFDQIDTS---------NPNCVVI-ADAGESFSYQNMNNAFQVLMEL-EKPVL- 151 (271)
T ss_dssp HHHHHHTCCEEEECC------GGGGGGGTTSCCS---------SCSEEEE-CCCGGGCCHHHHHHHHHHHHHC-SSCCE-
T ss_pred HHHHHcCCEEEEEeC------HHHHHHHHHcCCC---------CCCEEEE-ecCCCCcCHHHHHHHHHHHHhc-CCCeE-
Confidence 1100 0000000000 0011111100000 0000000 0000000000111111111110 00111
Q ss_pred EEE------------------------cCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcc
Q 045882 730 VKR------------------------GYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESIS 784 (832)
Q Consensus 730 v~~------------------------g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~ 784 (832)
+.. .....|+.+.+.+|+.+++.+++++ |++++++++|||+. ||++|++.+|
T Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~a~~aG 228 (271)
T 2x4d_A 152 ISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAI---GVEAHQAVMIGDDIVGDVGGAQRCG 228 (271)
T ss_dssp EEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTT
T ss_pred EEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHh---CCCcceEEEECCCcHHHHHHHHHCC
Confidence 000 0012366788899999999999999 99999999999998 9999999999
Q ss_pred cccCCCCCCCCCcEEEEEeCC-c-------ccccceEeCChhHHHHHHHHhh
Q 045882 785 QATYGSSLPIAPEIFACTVGQ-K-------PSKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 785 ~~~~~~~~~~~~~~f~v~vG~-~-------~s~A~y~l~~~~eV~~~L~~l~ 828 (832)
.. +..|..|. . ...|.+++++..++.++|.++.
T Consensus 229 ~~-----------~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 269 (271)
T 2x4d_A 229 MR-----------ALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQHA 269 (271)
T ss_dssp CE-----------EEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHHHC
T ss_pred Cc-----------EEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHhhc
Confidence 75 24455552 1 1348899999999988887654
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.5e-12 Score=135.78 Aligned_cols=215 Identities=17% Similarity=0.138 Sum_probs=123.1
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcC---CChhhHHHHhcCCC----CceEEEeCCEEE
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSG---RGKVSLGEWLAPCE----NLGIAAEHGYYL 650 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~----~l~liaenGa~i 650 (832)
+.|+|+||+||||++ ...+.+++.++|++| +++|+.|+++|| |+...+.+.+..++ ...+++.||+..
T Consensus 7 ~~kli~~DlDGTLl~----~~~~~~~~~~ai~~l-~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 81 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGK----SVTPIPEGVEGVKKL-KELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATA 81 (268)
T ss_dssp CCSEEEEECBTTTEE----TTEECHHHHHHHHHH-HHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEcCcCcEEC----CCEeCcCHHHHHHHH-HHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHH
Confidence 478999999999998 334667899999999 688999999999 67777777776543 124677666533
Q ss_pred EeC----CCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEE-eecceeEEEEeccCCCCCCchhHHHHHHHHHHHh--
Q 045882 651 RWT----KKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYI-EKKETALVWHYQDAAPGFGSCQAKELLDHLESVL-- 723 (832)
Q Consensus 651 ~~~----~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~i-e~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l-- 723 (832)
..- ....... .. . +.+...+... |..+ ........+.. .+..+......+....+....
T Consensus 82 ~~~~~~~~~~~~~~-~~--~----~~l~~~~~~~-----g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~ 147 (268)
T 3qgm_A 82 RFIAREKPNAKVFT-TG--E----EGLIEELRLA-----GLEIVDYDEAEYLVVG--SNRKINFELMTKALRACLRGIRY 147 (268)
T ss_dssp HHHHHHSTTCEEEE-CC--C----HHHHHHHHHT-----TCEECCTTTCSEEEEC--CCTTCBHHHHHHHHHHHHHTCEE
T ss_pred HHHHhhCCCCeEEE-Ec--C----HHHHHHHHHc-----CCeecCCCCCCEEEEe--cCCCCCHHHHHHHHHHHhCCCcE
Confidence 211 0000000 00 0 1111111111 1111 11111111110 111111111112222222100
Q ss_pred --cCCCEEEEEcCe----------------EEEE-EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHc
Q 045882 724 --ANEPVVVKRGYN----------------IVEV-KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESI 783 (832)
Q Consensus 724 --~~~~~~v~~g~~----------------~vEV-~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a 783 (832)
.+.......... ..|+ ...+..|+.+++.+++++ |++++++++|||+ .||+.|.+.+
T Consensus 148 i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~~~~~ 224 (268)
T 3qgm_A 148 IATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDIL---GLDAKDVAVVGDQIDVDVAAGKAI 224 (268)
T ss_dssp EESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHH
T ss_pred EEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHh---CCCchhEEEECCCchHHHHHHHHC
Confidence 011100000000 1245 667888999999999999 9999999999999 6999999999
Q ss_pred ccccCCCCCCCCCcEEEEEeCCcc----c--------ccceEeCChhHHHHHHH
Q 045882 784 SQATYGSSLPIAPEIFACTVGQKP----S--------KARYYLDDEEDVLALLK 825 (832)
Q Consensus 784 ~~~~~~~~~~~~~~~f~v~vG~~~----s--------~A~y~l~~~~eV~~~L~ 825 (832)
|.. .+.|..|... . .|+|++++..++.++|+
T Consensus 225 g~~-----------~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 225 GAE-----------TVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp TCE-----------EEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC-
T ss_pred CCc-----------EEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHHh
Confidence 863 2455556421 1 68999999999888764
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-12 Score=134.26 Aligned_cols=70 Identities=13% Similarity=0.096 Sum_probs=58.1
Q ss_pred EEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc--------
Q 045882 737 VEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQATYGSSLPIAPEIFACTVGQKP-------- 807 (832)
Q Consensus 737 vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~-------- 807 (832)
.|+.+.+.+|+.+++.+++++ |++++++++|||+ .||++|++.+|.. +..|..|..+
T Consensus 169 ~~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~~~~aG~~-----------~~~v~~g~~~~~~~~~~~ 234 (250)
T 2c4n_A 169 RKPFYVGKPSPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQAGLE-----------TILVLSGVSSLDDIDSMP 234 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCE-----------EEEESSSSCCGGGGSSCS
T ss_pred CCceEeCCCCHHHHHHHHHHc---CCCcceEEEECCCchhHHHHHHHcCCe-----------EEEECCCCCChhhhhhcC
Confidence 466789999999999999999 9999999999999 7999999999975 2445556421
Q ss_pred cccceEeCChhHH
Q 045882 808 SKARYYLDDEEDV 820 (832)
Q Consensus 808 s~A~y~l~~~~eV 820 (832)
..|+|++++..++
T Consensus 235 ~~~~~v~~~~~el 247 (250)
T 2c4n_A 235 FRPSWIYPSVAEI 247 (250)
T ss_dssp SCCSEEESSGGGC
T ss_pred CCCCEEECCHHHh
Confidence 4688999887765
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-14 Score=158.35 Aligned_cols=211 Identities=15% Similarity=0.031 Sum_probs=116.7
Q ss_pred ccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCCh---hhHH---HHh--cCCC-CceEEEeC
Q 045882 576 RTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGK---VSLG---EWL--APCE-NLGIAAEH 646 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~---~~~--~~l~-~l~liaen 646 (832)
....|+|+||+||||++. +. .++|.++ ...|+.++++|||+. ..+. .++ ..++ ..++++.|
T Consensus 18 ~~~~kli~fDlDGTLld~---~~------~~~l~~~-~~~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~~~~i~~n 87 (332)
T 1y8a_A 18 YFQGHMFFTDWEGPWILT---DF------ALELCMA-VFNNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAA 87 (332)
T ss_dssp --CCCEEEECSBTTTBCC---CH------HHHHHHH-HHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHT
T ss_pred CCCceEEEEECcCCCcCc---cH------HHHHHHH-HHCCCEEEEEcCCCchhhhhhhhccCeechhhcCCcCeEEEcC
Confidence 345789999999999983 22 1677777 467889999999998 6555 444 3322 23478889
Q ss_pred CEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEe-ecc----------eeE--EEEeccCCCC-CC-chh
Q 045882 647 GYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIE-KKE----------TAL--VWHYQDAAPG-FG-SCQ 711 (832)
Q Consensus 647 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie-~k~----------~~l--~~~~~~ad~~-~~-~~~ 711 (832)
|+.++..+. .+..... ..+.+.++++.+.+ .-...+. .+. ..+ .+.....+.+ +. ...
T Consensus 88 Ga~i~~~~~-~~~~~~~-----~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (332)
T 1y8a_A 88 GVKNRDVER-IAELSAK-----FVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEG 160 (332)
T ss_dssp TCCHHHHHH-HHHHHCC-----BCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHH
T ss_pred CcEEEECCe-EeeccCC-----CHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcccccchhhhccccc
Confidence 998763221 1111001 12445666665554 1111111 110 000 0000000000 00 000
Q ss_pred H---------HHHH----HHHHHHhcCCCEEEEEc-CeEEE--EEeCCCCHHHHHHHHHHhhhhCCCCcce----EEEEe
Q 045882 712 A---------KELL----DHLESVLANEPVVVKRG-YNIVE--VKPQGVTKGLVAEKVLSTMISDGKLPDF----VLCVG 771 (832)
Q Consensus 712 a---------~el~----~~l~~~l~~~~~~v~~g-~~~vE--V~p~gvnKG~al~~Ll~~l~~~gi~~d~----vl~~G 771 (832)
. ..+. +.+ +.+.+ +...++ ..++| +.|.+++||.+++.+ ++++ |++||
T Consensus 161 ~~k~~~~~~~~~~~~~~~~~l-~~~~~--~~~~s~~~~~~e~ii~~~g~~K~~al~gi---------~~~~~~~~via~G 228 (332)
T 1y8a_A 161 LREELLSIIDVIASLSGEELF-RKLDE--LFSRSEVRKIVESVKAVGAGEKAKIMRGY---------CESKGIDFPVVVG 228 (332)
T ss_dssp HHHHHHHHHHHHHHCCHHHHH-HHHHH--HHHSHHHHHHHHTCBCCCHHHHHHHHHHH---------HHHHTCSSCEEEE
T ss_pred cceeEEecCHHHHhhhhHHHH-HHHHH--HHhhcCCCceeeEEecCCCCCHHHHHhcc---------ChhhcCceEEEEe
Confidence 0 0000 111 11111 101111 12445 889999999999833 3456 99999
Q ss_pred CChhhHHHHHHc----ccccCCCCCCCCCcEEEEEeCCc--ccccceEeC--ChhHHHHHHHHhh
Q 045882 772 DDRSDEDMFESI----SQATYGSSLPIAPEIFACTVGQK--PSKARYYLD--DEEDVLALLKGLA 828 (832)
Q Consensus 772 Dd~ND~~Mf~~a----~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~--~~~eV~~~L~~l~ 828 (832)
|+.||++||+.+ +.+ ++| .+.. +..|+|++. +.++|.++|+++.
T Consensus 229 Ds~NDi~ml~~A~~~~g~~------------vam-na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~ 280 (332)
T 1y8a_A 229 DSISDYKMFEAARGLGGVA------------IAF-NGNEYALKHADVVIISPTAMSEAKVIELFM 280 (332)
T ss_dssp CSGGGHHHHHHHHHTTCEE------------EEE-SCCHHHHTTCSEEEECSSTHHHHHHHHHHH
T ss_pred CcHhHHHHHHHHhhcCCeE------------EEe-cCCHHHHhhCcEEecCCCCCHHHHHHHHHH
Confidence 999999999999 753 444 4432 567999985 4788999998875
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-11 Score=130.63 Aligned_cols=213 Identities=14% Similarity=0.068 Sum_probs=120.3
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEc---CCChhhHHHHhcCCC----CceEEEeCCEEE
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVS---GRGKVSLGEWLAPCE----NLGIAAEHGYYL 650 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~----~l~liaenGa~i 650 (832)
+.|+|+||+||||++ .++.+ +++.++|++| +++|+.|+++| ||+...+.+.+..++ ...+++.||+.+
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i-~~~~eal~~l-~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 78 (264)
T 3epr_A 4 AYKGYLIDLDGTIYK---GKSRI-PAGERFIERL-QEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATV 78 (264)
T ss_dssp CCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHH
T ss_pred CCCEEEEeCCCceEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHH
Confidence 478999999999999 56777 8999999999 68899999999 888888888887653 123677676644
Q ss_pred EeCCCcc-EEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHh----cC
Q 045882 651 RWTKKSE-WETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVL----AN 725 (832)
Q Consensus 651 ~~~~~~~-w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l----~~ 725 (832)
..-.... ......... +.+...++.+ |..+........+.. .+..+......+....+.... .+
T Consensus 79 ~~l~~~~~~~~~~~~~~----~~l~~~l~~~-----g~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~l~~~~~~i~~n 147 (264)
T 3epr_A 79 DYMNDMNRGKTAYVIGE----EGLKKAIADA-----GYVEDTKNPAYVVVG--LDWNVTYDKLATATLAIQNGALFIGTN 147 (264)
T ss_dssp HHHHHHTCCSEEEEESC----HHHHHHHHHT-----TCEECSSSCSEEEEC--CCTTCCHHHHHHHHHHHHTTCEEEESC
T ss_pred HHHHHhCCCCeEEEECC----HHHHHHHHHc-----CCcccCCcCCEEEEe--CCCCCCHHHHHHHHHHHHCCCeEEEEc
Confidence 3211100 000000000 1122222211 222221111111111 111221111112222221100 00
Q ss_pred CCEEEEEcCe----------------EEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHcccccC
Q 045882 726 EPVVVKRGYN----------------IVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQATY 788 (832)
Q Consensus 726 ~~~~v~~g~~----------------~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~~~~ 788 (832)
.......... ..|....+..|+.+++.+++.+ |++++++++|||+ .||+.|.+.+|..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-- 222 (264)
T 3epr_A 148 PDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEIL---NIPRNQAVMVGDNYLTDIMAGINNDID-- 222 (264)
T ss_dssp CCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHH---TSCGGGEEEEESCTTTHHHHHHHHTCE--
T ss_pred CCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHh---CcCcccEEEECCCcHHHHHHHHHCCCe--
Confidence 0000000000 1244556777888899999999 9999999999999 7999999999863
Q ss_pred CCCCCCCCcEEEEEeCCc------cc--ccceEeCChhHH
Q 045882 789 GSSLPIAPEIFACTVGQK------PS--KARYYLDDEEDV 820 (832)
Q Consensus 789 ~~~~~~~~~~f~v~vG~~------~s--~A~y~l~~~~eV 820 (832)
.+.|..|.. .. .++|++++..++
T Consensus 223 ---------~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l 253 (264)
T 3epr_A 223 ---------TLLVTTGFTTVEEVPDLPIQPSYVLASLDEW 253 (264)
T ss_dssp ---------EEEETTSSSCGGGGGGCSSCCSEEESCGGGC
T ss_pred ---------EEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 134444431 11 688888887664
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-10 Score=129.52 Aligned_cols=246 Identities=13% Similarity=0.139 Sum_probs=153.2
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHh--CCEEeecChhhHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLN--ADLIGFHTFDYAR 267 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~--~dligf~t~~~~~ 267 (832)
++++..+| |+|++|+.-...++..+..+..++|++ ..+.+.-+...++ |+++++.+.++. +|++...+....+
T Consensus 108 ~~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~ 182 (403)
T 3ot5_A 108 EVIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKE 182 (403)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEE-EEECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 44566788 899999976666665555555678875 3444432322222 445566655433 7998888888888
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeec-CCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEeccccc
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHV-GIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMDI 345 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~-GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRld~ 345 (832)
+|.+ .|+.. + +|.+.++ ++|...+.... .... +.++++ .++.+++.++|...
T Consensus 183 ~l~~-----~Gi~~--~-------------~i~vvGn~~~D~~~~~~~~--~~~~----~~~~~l~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 183 NLLA-----EGKDP--A-------------TIFVTGNTAIDALKTTVQK--DYHH----PILENLGDNRLILMTAHRREN 236 (403)
T ss_dssp HHHH-----TTCCG--G-------------GEEECCCHHHHHHHHHSCT--TCCC----HHHHSCTTCEEEEECCCCHHH
T ss_pred HHHH-----cCCCc--c-------------cEEEeCCchHHHHHhhhhh--hcch----HHHHhccCCCEEEEEeCcccc
Confidence 8763 24321 1 2333333 56654443211 0001 122223 34456778888765
Q ss_pred -cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 045882 346 -FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEK 424 (832)
Q Consensus 346 -~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el 424 (832)
-|++...++|+.++.+++|+++ +|.++.|. + .+++.+++.. +. ...|.+ .++++..++
T Consensus 237 ~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~~----~---~~~~~l~~~~-------~~--~~~v~l-~~~l~~~~~ 295 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVESREDTE----LVYPMHLN----P---AVREKAMAIL-------GG--HERIHL-IEPLDAIDF 295 (403)
T ss_dssp HTTHHHHHHHHHHHHHHHCTTEE----EEEECCSC----H---HHHHHHHHHH-------TT--CTTEEE-ECCCCHHHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCce----EEEecCCC----H---HHHHHHHHHh-------CC--CCCEEE-eCCCCHHHH
Confidence 3789999999999999999865 66554332 2 2333443321 11 123554 457888999
Q ss_pred HHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEec-cCccccccC--CCceEeCCCCHHH
Q 045882 425 TAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS-EFIGCSPSL--SGAIRVNPWDIDA 501 (832)
Q Consensus 425 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~s~~l--~~a~~VnP~d~~~ 501 (832)
..+|+.||++|.+| | |+ ..||++|+. |+|++ ..++..+.+ ..+++|.+ |.++
T Consensus 296 ~~l~~~ad~vv~~S---G-g~-~~EA~a~g~-------------------PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~ 350 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS---G-GV-QEEAPGMGV-------------------PVLVLRDTTERPEGIEAGTLKLIGT-NKEN 350 (403)
T ss_dssp HHHHHHEEEEEECC---H-HH-HHHGGGTTC-------------------CEEECCSSCSCHHHHHHTSEEECCS-CHHH
T ss_pred HHHHHhcCEEEECC---c-cH-HHHHHHhCC-------------------CEEEecCCCcchhheeCCcEEEcCC-CHHH
Confidence 99999999998887 2 33 389999954 57777 555555544 34677766 9999
Q ss_pred HHHHHHHHhcC
Q 045882 502 VADALHDAITM 512 (832)
Q Consensus 502 ~A~ai~~aL~m 512 (832)
++++|.++|+.
T Consensus 351 l~~ai~~ll~~ 361 (403)
T 3ot5_A 351 LIKEALDLLDN 361 (403)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHcC
Confidence 99999999974
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-10 Score=113.16 Aligned_cols=137 Identities=18% Similarity=0.125 Sum_probs=101.3
Q ss_pred CcEEEEEecCCCcCCCCC---C----CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEE
Q 045882 578 SRRAIFLDYDGTVVPHHA---L----IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYL 650 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~---~----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i 650 (832)
+.|+|+||+||||++... . ...+++.+.++|++| ++.|+.++|+||++...+...+..++...+..
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~------ 80 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLL-QKMGITLAVISGRDSAPLITRLKELGVEEIYT------ 80 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HTTTCEEEEEESCCCHHHHHHHHHTTCCEEEE------
T ss_pred ceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHcCCHhhcc------
Confidence 468999999999997321 0 122467788999999 67899999999999999888887653111110
Q ss_pred EeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEE
Q 045882 651 RWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVV 730 (832)
Q Consensus 651 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v 730 (832)
T Consensus 81 -------------------------------------------------------------------------------- 80 (162)
T 2p9j_A 81 -------------------------------------------------------------------------------- 80 (162)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----
Q 045882 731 KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---- 806 (832)
Q Consensus 731 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---- 806 (832)
.+..|..+++.+++.+ |++++++++|||+.||+.|++.+|.. +.+++.
T Consensus 81 -----------~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~ag~~--------------~~~~~~~~~~ 132 (162)
T 2p9j_A 81 -----------GSYKKLEIYEKIKEKY---SLKDEEIGFIGDDVVDIEVMKKVGFP--------------VAVRNAVEEV 132 (162)
T ss_dssp -----------CC--CHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSEE--------------EECTTSCHHH
T ss_pred -----------CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EEecCccHHH
Confidence 0356888999999998 99999999999999999999999853 334432
Q ss_pred ccccceEeCChh--HHH-HHHHHhhh
Q 045882 807 PSKARYYLDDEE--DVL-ALLKGLAA 829 (832)
Q Consensus 807 ~s~A~y~l~~~~--eV~-~~L~~l~~ 829 (832)
...|+|++++.+ +++ ++++.+.+
T Consensus 133 ~~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 133 RKVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HHHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred HhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 356899997654 444 67776654
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.6e-10 Score=112.15 Aligned_cols=67 Identities=13% Similarity=0.136 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hh
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EE 818 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~ 818 (832)
+|+.+++.+++.+ |++++++++|||+.||++|++.++. +++|++. +..|+|++.+ .+
T Consensus 83 ~K~~~l~~~~~~~---gi~~~~~~~vGD~~nDi~~~~~ag~--------------~~a~~na~~~~k~~Ad~v~~~~~~~ 145 (168)
T 3ewi_A 83 DKLATVDEWRKEM---GLCWKEVAYLGNEVSDEECLKRVGL--------------SAVPADACSGAQKAVGYICKCSGGR 145 (168)
T ss_dssp CHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHHHSSE--------------EEECTTCCHHHHTTCSEECSSCTTT
T ss_pred ChHHHHHHHHHHc---CcChHHEEEEeCCHhHHHHHHHCCC--------------EEEeCChhHHHHHhCCEEeCCCCCc
Confidence 5999999999999 9999999999999999999999984 5667764 5789999854 34
Q ss_pred HH-HHHHHHhh
Q 045882 819 DV-LALLKGLA 828 (832)
Q Consensus 819 eV-~~~L~~l~ 828 (832)
++ .++.+.+.
T Consensus 146 G~~~~~~~~il 156 (168)
T 3ewi_A 146 GAIREFAEHIF 156 (168)
T ss_dssp THHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 53 34444443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.16 E-value=4.3e-11 Score=118.63 Aligned_cols=65 Identities=22% Similarity=0.243 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--h
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--E 817 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~ 817 (832)
.+|+.+++.+++.+ |++++++++|||+.||++|++.++. ++++|+. +..|+|++.+ .
T Consensus 85 ~~k~~~l~~~~~~~---~~~~~~~~~vGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~~~ad~v~~~~~~ 147 (176)
T 3mmz_A 85 DRKDLALKQWCEEQ---GIAPERVLYVGNDVNDLPCFALVGW--------------PVAVASAHDVVRGAARAVTTVPGG 147 (176)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHHHHHHSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCC--------------eEECCChhHHHHHhCCEEecCCCC
Confidence 67999999999999 9999999999999999999999984 6677653 4668898865 3
Q ss_pred hHHHHHHH
Q 045882 818 EDVLALLK 825 (832)
Q Consensus 818 ~eV~~~L~ 825 (832)
+++++.+.
T Consensus 148 ~g~~~~l~ 155 (176)
T 3mmz_A 148 DGAIREIA 155 (176)
T ss_dssp TTHHHHHH
T ss_pred CcHHHHHH
Confidence 44444443
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.5e-10 Score=115.92 Aligned_cols=141 Identities=19% Similarity=0.146 Sum_probs=101.8
Q ss_pred hhccCcEEEEEecCCCcCCCCC---CCC----CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeC
Q 045882 574 YKRTSRRAIFLDYDGTVVPHHA---LIK----KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEH 646 (832)
Q Consensus 574 y~~s~~rlI~lD~DGTLl~~~~---~~~----~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaen 646 (832)
++..+.|+|+||+||||++... ... ........+|++| ++.|+.++|+||++...+..++..++...+.
T Consensus 21 ~~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~--- 96 (188)
T 2r8e_A 21 AKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCA-LTSDIEVAIITGRKAKLVEDRCATLGITHLY--- 96 (188)
T ss_dssp HHHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHH-HTTTCEEEEECSSCCHHHHHHHHHHTCCEEE---
T ss_pred HHHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHH-HHCCCeEEEEeCCChHHHHHHHHHcCCceee---
Confidence 3456789999999999997211 011 1123334478888 6789999999999999888877654311110
Q ss_pred CEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC
Q 045882 647 GYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE 726 (832)
Q Consensus 647 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~ 726 (832)
T Consensus 97 -------------------------------------------------------------------------------- 96 (188)
T 2r8e_A 97 -------------------------------------------------------------------------------- 96 (188)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc
Q 045882 727 PVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK 806 (832)
Q Consensus 727 ~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~ 806 (832)
+.+.+|..+++.+++.+ |++++++++|||+.||++|++.+|. ++.+++.
T Consensus 97 --------------~~~kpk~~~~~~~~~~~---g~~~~~~~~iGD~~~Di~~a~~ag~--------------~~~~~~~ 145 (188)
T 2r8e_A 97 --------------QGQSNKLIAFSDLLEKL---AIAPENVAYVGDDLIDWPVMEKVGL--------------SVAVADA 145 (188)
T ss_dssp --------------CSCSCSHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTS
T ss_pred --------------cCCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEecCc
Confidence 01367899999999999 9999999999999999999999985 4455542
Q ss_pred ----ccccceEeCCh--hHHH-HHHHHhhh
Q 045882 807 ----PSKARYYLDDE--EDVL-ALLKGLAA 829 (832)
Q Consensus 807 ----~s~A~y~l~~~--~eV~-~~L~~l~~ 829 (832)
+..|+|++++. .+++ ++++.+..
T Consensus 146 ~~~~~~~ad~v~~~~~~~g~~~~~l~~ll~ 175 (188)
T 2r8e_A 146 HPLLIPRADYVTRIAGGRGAVREVCDLLLL 175 (188)
T ss_dssp CTTTGGGSSEECSSCTTTTHHHHHHHHHHH
T ss_pred CHHHHhcCCEEEeCCCCCcHHHHHHHHHHH
Confidence 45688998764 4455 77776654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=116.87 Aligned_cols=136 Identities=16% Similarity=0.150 Sum_probs=96.2
Q ss_pred cCcEEEEEecCCCcCCCCC---C----CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEE
Q 045882 577 TSRRAIFLDYDGTVVPHHA---L----IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYY 649 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~---~----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~ 649 (832)
.+.|+|+||+||||++... . -..........|+.| ++.|+.++|+||++...+...+..++-..+
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~------- 94 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKAL-MNAGIEIAIITGRRSQIVENRMKALGISLI------- 94 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHH-HHTTCEEEEECSSCCHHHHHHHHHTTCCEE-------
T ss_pred hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHH-HHCCCEEEEEECcCHHHHHHHHHHcCCcEE-------
Confidence 4678999999999997221 0 011222233358888 678999999999988888777765421000
Q ss_pred EEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE
Q 045882 650 LRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVV 729 (832)
Q Consensus 650 i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~ 729 (832)
+.
T Consensus 95 --------------------------------------------------~~---------------------------- 96 (195)
T 3n07_A 95 --------------------------------------------------YQ---------------------------- 96 (195)
T ss_dssp --------------------------------------------------EC----------------------------
T ss_pred --------------------------------------------------ee----------------------------
Confidence 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---
Q 045882 730 VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--- 806 (832)
Q Consensus 730 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--- 806 (832)
...+|+.+++.+++.+ |++++++++|||+.||++|++.++. ++++++.
T Consensus 97 ------------~~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~nDi~~~~~ag~--------------~va~~na~~~ 147 (195)
T 3n07_A 97 ------------GQDDKVQAYYDICQKL---AIAPEQTGYIGDDLIDWPVMEKVAL--------------RVCVADGHPL 147 (195)
T ss_dssp ------------SCSSHHHHHHHHHHHH---CCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTSCHH
T ss_pred ------------CCCCcHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHCCC--------------EEEECChHHH
Confidence 0047999999999999 9999999999999999999999984 6677764
Q ss_pred -ccccceEeCC--hhHHH-HHHHHh
Q 045882 807 -PSKARYYLDD--EEDVL-ALLKGL 827 (832)
Q Consensus 807 -~s~A~y~l~~--~~eV~-~~L~~l 827 (832)
+..|+|++.+ .++|+ .+.+.+
T Consensus 148 ~~~~ad~v~~~~~~~G~~~~~~~~i 172 (195)
T 3n07_A 148 LAQRANYVTHIKGGHGAVREVCDLI 172 (195)
T ss_dssp HHHHCSEECSSCTTTTHHHHHHHHH
T ss_pred HHHhCCEEEcCCCCCCHHHHHHHHH
Confidence 4678998864 34543 344333
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=9.1e-11 Score=114.32 Aligned_cols=135 Identities=15% Similarity=0.098 Sum_probs=97.7
Q ss_pred CcEEEEEecCCCcCCCCC---CCC----CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEE
Q 045882 578 SRRAIFLDYDGTVVPHHA---LIK----KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYL 650 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~---~~~----~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i 650 (832)
+.|+++||+||||++... ... ........+|+.| ++.|+.++|+||++...+...+..++-..+...
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~----- 76 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWA-HNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG----- 76 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHH-HHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS-----
T ss_pred cceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHH-HHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc-----
Confidence 578999999999998321 011 0111122357777 577999999999999988888876542222111
Q ss_pred EeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEE
Q 045882 651 RWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVV 730 (832)
Q Consensus 651 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v 730 (832)
T Consensus 77 -------------------------------------------------------------------------------- 76 (164)
T 3e8m_A 77 -------------------------------------------------------------------------------- 76 (164)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----
Q 045882 731 KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---- 806 (832)
Q Consensus 731 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---- 806 (832)
...|..+++.+++.+ |++++++++|||+.||++|++.++. ++.+++.
T Consensus 77 ------------~kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~~ 127 (164)
T 3e8m_A 77 ------------VVDKLSAAEELCNEL---GINLEQVAYIGDDLNDAKLLKRVGI--------------AGVPASAPFYI 127 (164)
T ss_dssp ------------CSCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHTTSSE--------------EECCTTSCHHH
T ss_pred ------------cCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEEcCChHHHH
Confidence 257999999999999 9999999999999999999999984 4555543
Q ss_pred ccccceEeCCh--hH-HHHHHHHh
Q 045882 807 PSKARYYLDDE--ED-VLALLKGL 827 (832)
Q Consensus 807 ~s~A~y~l~~~--~e-V~~~L~~l 827 (832)
+..|+|++.+. ++ +.++++.+
T Consensus 128 ~~~ad~v~~~~~~~g~~~e~~~~l 151 (164)
T 3e8m_A 128 RRLSTIFLEKRGGEGVFREFVEKV 151 (164)
T ss_dssp HTTCSSCCCCCTTTTHHHHHHHHH
T ss_pred HHhCcEEeccCCCCcHHHHHHHHH
Confidence 46788988653 33 66666655
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-10 Score=116.60 Aligned_cols=134 Identities=14% Similarity=0.081 Sum_probs=95.0
Q ss_pred cCcEEEEEecCCCcCCCCC---CC----CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEE
Q 045882 577 TSRRAIFLDYDGTVVPHHA---LI----KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYY 649 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~---~~----~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~ 649 (832)
.+.|+++||+||||++... .. .......-.+|+.| ++.|+.++|+||++...+...+..++-..+.. ..
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~-~~-- 92 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLL-MAAGIQVAIITTAQNAVVDHRMEQLGITHYYK-GQ-- 92 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHH-HHTTCEEEEECSCCSHHHHHHHHHHTCCEEEC-SC--
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHH-HHCCCeEEEEeCcChHHHHHHHHHcCCcccee-CC--
Confidence 4678999999999997221 00 11112222248888 67899999999999888877776542111100 00
Q ss_pred EEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE
Q 045882 650 LRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVV 729 (832)
Q Consensus 650 i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~ 729 (832)
T Consensus 93 -------------------------------------------------------------------------------- 92 (191)
T 3n1u_A 93 -------------------------------------------------------------------------------- 92 (191)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---
Q 045882 730 VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--- 806 (832)
Q Consensus 730 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--- 806 (832)
.+|+.+++.+++.+ |++++++++|||+.||++|++.++. ++++++.
T Consensus 93 --------------kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~ 141 (191)
T 3n1u_A 93 --------------VDKRSAYQHLKKTL---GLNDDEFAYIGDDLPDLPLIQQVGL--------------GVAVSNAVPQ 141 (191)
T ss_dssp --------------SSCHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHH
T ss_pred --------------CChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEeCCccHH
Confidence 57899999999999 9999999999999999999999984 4567664
Q ss_pred -ccccceEeCC--hhHHHHHHH
Q 045882 807 -PSKARYYLDD--EEDVLALLK 825 (832)
Q Consensus 807 -~s~A~y~l~~--~~eV~~~L~ 825 (832)
+..|+|++.+ .++++..|.
T Consensus 142 ~~~~ad~v~~~~~~~g~~~~l~ 163 (191)
T 3n1u_A 142 VLEFADWRTERTGGRGAVRELC 163 (191)
T ss_dssp HHHHSSEECSSCTTTTHHHHHH
T ss_pred HHHhCCEEecCCCCCcHHHHHH
Confidence 4678999865 344444333
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-09 Score=117.80 Aligned_cols=227 Identities=15% Similarity=0.097 Sum_probs=127.3
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEc---CCChhhHHHHhcCCCC--
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVS---GRGKVSLGEWLAPCEN-- 639 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~~-- 639 (832)
++.+.+.+-. .+.|+|+||+||||++ . ..+.+.+.++|++| ++.|+.++++| ||+...+.+.+..++.
T Consensus 9 ~~~~~~~~~~--~~~k~i~~D~DGTL~~---~-~~~~~~~~~~l~~l-~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~ 81 (306)
T 2oyc_A 9 LRGAALRDVL--GRAQGVLFDCDGVLWN---G-ERAVPGAPELLERL-ARAGKAALFVSNNSRRARPELALRFARLGFGG 81 (306)
T ss_dssp CCHHHHHHHH--HHCSEEEECSBTTTEE---T-TEECTTHHHHHHHH-HHTTCEEEEEECCCSSCHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHH--hhCCEEEECCCCcEec---C-CccCcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHhcCCCc
Confidence 5555554432 2467999999999997 2 34567899999999 68899999999 6888888777765432
Q ss_pred ---ceEEEeCCEEEEeC----------CCccEEEcCcccchhHHHHHHHHHHHHH-hcCCc---eEEeecceeEEEEecc
Q 045882 640 ---LGIAAEHGYYLRWT----------KKSEWETSTVAADFEWKRITEPVMKLYT-EATDG---SYIEKKETALVWHYQD 702 (832)
Q Consensus 640 ---l~liaenGa~i~~~----------~~~~w~~~~~~~~~~w~~~v~~i~~~~~-e~~~g---s~ie~k~~~l~~~~~~ 702 (832)
..+++.||+.+..- +...+. .. ...+...+...- ..... .+.........+...
T Consensus 82 ~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~--~g------~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~~~- 152 (306)
T 2oyc_A 82 LRAEQLFSSALCAARLLRQRLPGPPDAPGAVFV--LG------GEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGY- 152 (306)
T ss_dssp CCGGGEEEHHHHHHHHHHHHCCSCSSSCCEEEE--ES------CHHHHHHHHHTTCEETTSCCCC---CCCEEEEEECC-
T ss_pred CChhhEEcHHHHHHHHHHhhCCccccCCCeEEE--EC------CHHHHHHHHHCCCEeecccccccccCCCCCEEEEeC-
Confidence 24666665443211 111111 00 011222222110 00000 011111112222211
Q ss_pred CCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCe-E------------------------EEEEeCCCCHHHHHHHHHHhh
Q 045882 703 AAPGFGSCQAKELLDHLESVLANEPVVVKRGYN-I------------------------VEVKPQGVTKGLVAEKVLSTM 757 (832)
Q Consensus 703 ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~-~------------------------vEV~p~gvnKG~al~~Ll~~l 757 (832)
+.........++++.+. ......+.++.. . .+....+..|+.+++.+++.+
T Consensus 153 -~~~~~~~~~~~~l~~l~---~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~l 228 (306)
T 2oyc_A 153 -DEHFSFAKLREACAHLR---DPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENF 228 (306)
T ss_dssp -CTTCCHHHHHHHHHHHT---STTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHS
T ss_pred -CCCCCHHHHHHHHHHHH---cCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHc
Confidence 12222222333333332 111122222211 1 123456788999999999999
Q ss_pred hhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--------------ccccceEeCChhHHHH
Q 045882 758 ISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQK--------------PSKARYYLDDEEDVLA 822 (832)
Q Consensus 758 ~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--------------~s~A~y~l~~~~eV~~ 822 (832)
|++++++++|||+. ||+.|.+.+|.. .+.|.-|.. ...++|++++..++..
T Consensus 229 ---gi~~~e~l~vGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~ 294 (306)
T 2oyc_A 229 ---SIDPARTLMVGDRLETDILFGHRCGMT-----------TVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTE 294 (306)
T ss_dssp ---CCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGG
T ss_pred ---CCChHHEEEECCCchHHHHHHHHCCCe-----------EEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHH
Confidence 99999999999995 999999999874 122333321 1357899999888876
Q ss_pred HHH
Q 045882 823 LLK 825 (832)
Q Consensus 823 ~L~ 825 (832)
+|+
T Consensus 295 ~l~ 297 (306)
T 2oyc_A 295 GLE 297 (306)
T ss_dssp GC-
T ss_pred HHH
Confidence 665
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=2.9e-10 Score=114.02 Aligned_cols=65 Identities=23% Similarity=0.304 Sum_probs=54.0
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeCC--
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLDD-- 816 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~~-- 816 (832)
.+.+|+.++..+++.+ |++++++++|||+.||++|++.+|. +|.++.. +..|+|++++
T Consensus 140 ~~~~K~~~l~~~~~~l---gi~~~~~~~iGD~~~Di~~~~~ag~--------------~~~~~~~~~~~~~a~~v~~~~~ 202 (211)
T 1l7m_A 140 KENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGL--------------KIAFCAKPILKEKADICIEKRD 202 (211)
T ss_dssp STTHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE--------------EEEESCCHHHHTTCSEEECSSC
T ss_pred CCccHHHHHHHHHHHc---CCCHHHEEEEecChhHHHHHHHCCC--------------EEEECCCHHHHhhcceeecchh
Confidence 4789999999999999 9999999999999999999999985 4455532 4568999976
Q ss_pred hhHHHHH
Q 045882 817 EEDVLAL 823 (832)
Q Consensus 817 ~~eV~~~ 823 (832)
..++..+
T Consensus 203 ~~~l~~~ 209 (211)
T 1l7m_A 203 LREILKY 209 (211)
T ss_dssp GGGGGGG
T ss_pred HHHHHHh
Confidence 7776544
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.06 E-value=3.9e-10 Score=113.01 Aligned_cols=56 Identities=20% Similarity=0.182 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD 816 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~ 816 (832)
.+|..+++.+++.+ |++++++++|||+.||++|++.++. ++++|+. +..|+|++.+
T Consensus 93 ~~K~~~~~~~~~~~---g~~~~~~~~vGD~~nDi~~~~~ag~--------------~~~~~~~~~~~~~~ad~v~~~ 152 (189)
T 3mn1_A 93 EDKLVVLDKLLAEL---QLGYEQVAYLGDDLPDLPVIRRVGL--------------GMAVANAASFVREHAHGITRA 152 (189)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHHTSSEECSS
T ss_pred CChHHHHHHHHHHc---CCChhHEEEECCCHHHHHHHHHCCC--------------eEEeCCccHHHHHhCCEEecC
Confidence 68999999999999 9999999999999999999999984 5667663 4568998865
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.03 E-value=3e-10 Score=118.54 Aligned_cols=72 Identities=14% Similarity=0.109 Sum_probs=57.2
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCC--c------ccccc
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQ--K------PSKAR 811 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~------~s~A~ 811 (832)
..+..|..+++.+++++ |++++++++|||+. ||+.|.+.+|.. .+.|.-|. . ...+.
T Consensus 176 ~~~Kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ 241 (259)
T 2ho4_A 176 VVGKPEKTFFLEALRDA---DCAPEEAVMIGDDCRDDVDGAQNIGML-----------GILVKTGKYKAADEEKINPPPY 241 (259)
T ss_dssp ECSTTSHHHHHHHGGGG---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSTTCCTTGGGGSSSCCS
T ss_pred EecCCCHHHHHHHHHHc---CCChHHEEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCcccccccCCCCC
Confidence 45668899999999999 99999999999998 999999999863 13343342 1 24578
Q ss_pred eEeCChhHHHHHHHH
Q 045882 812 YYLDDEEDVLALLKG 826 (832)
Q Consensus 812 y~l~~~~eV~~~L~~ 826 (832)
|++++..++.++|..
T Consensus 242 ~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 242 LTCESFPHAVDHILQ 256 (259)
T ss_dssp EEESCHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHH
Confidence 899999998887754
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.99 E-value=4.3e-09 Score=107.52 Aligned_cols=202 Identities=13% Similarity=0.062 Sum_probs=112.7
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHH-HHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCC-C
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDV-IYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTK-K 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~-~ 655 (832)
+.|+|+||+||||++ ......+.. .++++++ ..++..+...+|++.......+........ ...+..... .
T Consensus 24 ~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~~-g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 96 (231)
T 3kzx_A 24 QPTAVIFDWYNTLID---TSINIDRTTFYQVLDQM-GYKNIDLDSIPNSTIPKYLITLLGKRWKEA---TILYENSLEKS 96 (231)
T ss_dssp CCSEEEECTBTTTEE---TTSSCCHHHHHHHHHHT-TCCCCCCTTSCTTTHHHHHHHHHGGGHHHH---HHHHHHHHHHC
T ss_pred CCCEEEECCCCCCcC---CchhHHHHHHHHHHHHc-CCCHHHHHHHhCccHHHHHHHHhCchHHHH---HHHHHHHHhhh
Confidence 578999999999998 566788888 8999988 455666777778776544332211000000 000000000 0
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcC-CCEEEEEcC
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLAN-EPVVVKRGY 734 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~-~~~~v~~g~ 734 (832)
.... .....+.+.++++...++ | ..+.+-... .. ......++.+. +.. +...+.+..
T Consensus 97 ~~~~------~~~~~~~~~~~l~~l~~~--g-------~~~~i~T~~-~~----~~~~~~l~~~g--l~~~f~~i~~~~~ 154 (231)
T 3kzx_A 97 QKSD------NFMLNDGAIELLDTLKEN--N-------ITMAIVSNK-NG----ERLRSEIHHKN--LTHYFDSIIGSGD 154 (231)
T ss_dssp CSCC------CCEECTTHHHHHHHHHHT--T-------CEEEEEEEE-EH----HHHHHHHHHTT--CGGGCSEEEEETS
T ss_pred cccc------cceECcCHHHHHHHHHHC--C-------CeEEEEECC-CH----HHHHHHHHHCC--chhheeeEEcccc
Confidence 0000 000012233344443332 1 111111110 00 01112222110 111 222222221
Q ss_pred eEEEEEeCCCCHHHHHHHHHHhhhhCCCCcc-eEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc-cccce
Q 045882 735 NIVEVKPQGVTKGLVAEKVLSTMISDGKLPD-FVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKP-SKARY 812 (832)
Q Consensus 735 ~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d-~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~-s~A~y 812 (832)
...+..|..+++.+++.+ |++++ ++++|||+.||+.|++.+|. -+|.+|+.. ..+.+
T Consensus 155 -----~~~~Kp~~~~~~~~~~~l---gi~~~~~~v~vGD~~~Di~~a~~aG~-------------~~v~~~~~~~~~~~~ 213 (231)
T 3kzx_A 155 -----TGTIKPSPEPVLAALTNI---NIEPSKEVFFIGDSISDIQSAIEAGC-------------LPIKYGSTNIIKDIL 213 (231)
T ss_dssp -----SSCCTTSSHHHHHHHHHH---TCCCSTTEEEEESSHHHHHHHHHTTC-------------EEEEECC-----CCE
T ss_pred -----cCCCCCChHHHHHHHHHc---CCCcccCEEEEcCCHHHHHHHHHCCC-------------eEEEECCCCCCCCce
Confidence 244667788999999999 99998 99999999999999999985 367788754 47889
Q ss_pred EeCChhHHHHHHHHhhh
Q 045882 813 YLDDEEDVLALLKGLAA 829 (832)
Q Consensus 813 ~l~~~~eV~~~L~~l~~ 829 (832)
.+++..++.++|.++.+
T Consensus 214 ~~~~~~el~~~l~~~l~ 230 (231)
T 3kzx_A 214 SFKNFYDIRNFICQLIN 230 (231)
T ss_dssp EESSHHHHHHHHHHHHC
T ss_pred eeCCHHHHHHHHHHHhc
Confidence 99999999999998764
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-09 Score=109.21 Aligned_cols=76 Identities=14% Similarity=0.140 Sum_probs=60.0
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC--Cc----c
Q 045882 734 YNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG--QK----P 807 (832)
Q Consensus 734 ~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG--~~----~ 807 (832)
..+.++.+.+.+|+..++.+.+.+ |++++++++|||+.||++|++ +|... +++.+| +. +
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~vGD~~~Di~~~~-~G~~~-----------~~v~~~~~~~~~~~~ 201 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAK---GLIDGEVIAIGDGYTDYQLYE-KGYAT-----------KFIAYMEHIEREKVI 201 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHG---GGCCSEEEEEESSHHHHHHHH-HTSCS-----------EEEEECSSCCCHHHH
T ss_pred CceeccCCCCCCcccHHHHHHHHh---CCCCCCEEEEECCHhHHHHHh-CCCCc-----------EEEeccCccccHHHH
Confidence 445678889999999999999988 899999999999999999996 44320 234444 32 3
Q ss_pred cccceEeCChhHHHHHH
Q 045882 808 SKARYYLDDEEDVLALL 824 (832)
Q Consensus 808 s~A~y~l~~~~eV~~~L 824 (832)
..|+|++++.+++.++|
T Consensus 202 ~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 202 NLSKYVARNVAELASLI 218 (219)
T ss_dssp HHCSEEESSHHHHHHHH
T ss_pred hhcceeeCCHHHHHHhh
Confidence 56999999999988775
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.8e-09 Score=108.80 Aligned_cols=68 Identities=21% Similarity=0.237 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCCh--
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDE-- 817 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~-- 817 (832)
.+|..+++.+++.+ |++++++++|||+.||++|++.++. ++++++. +..|+|++.+.
T Consensus 123 k~K~~~l~~~~~~l---g~~~~~~~~vGDs~nDi~~~~~ag~--------------~~a~~~~~~~~~~~Ad~v~~~~~~ 185 (211)
T 3ij5_A 123 SDKLVAYHELLATL---QCQPEQVAYIGDDLIDWPVMAQVGL--------------SVAVADAHPLLLPKAHYVTRIKGG 185 (211)
T ss_dssp SSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTTSSE--------------EEECTTSCTTTGGGSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CcCcceEEEEcCCHHHHHHHHHCCC--------------EEEeCCccHHHHhhCCEEEeCCCC
Confidence 47999999999999 9999999999999999999999984 5666653 46789998654
Q ss_pred hH-HHHHHHHhh
Q 045882 818 ED-VLALLKGLA 828 (832)
Q Consensus 818 ~e-V~~~L~~l~ 828 (832)
++ |.++++.+.
T Consensus 186 ~G~v~e~~~~ll 197 (211)
T 3ij5_A 186 RGAVREVCDLIL 197 (211)
T ss_dssp TTHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 22 445554443
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.6e-09 Score=103.51 Aligned_cols=66 Identities=15% Similarity=0.019 Sum_probs=53.2
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--------ccccceEeCChh
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--------PSKARYYLDDEE 818 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--------~s~A~y~l~~~~ 818 (832)
....+.+++++ |++++++++|||+.||+.|.+.+|.. .+.|..|.. ...|.|++++..
T Consensus 104 ~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~d~v~~~l~ 169 (179)
T 3l8h_A 104 PGMYRDIARRY---DVDLAGVPAVGDSLRDLQAAAQAGCA-----------PWLVQTGNGRKTLAQGGLPEGTRVCEDLA 169 (179)
T ss_dssp SHHHHHHHHHH---TCCCTTCEEEESSHHHHHHHHHHTCE-----------EEEESTTTHHHHHHHCCCCTTEEEESSHH
T ss_pred HHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCc-----------EEEECCCCcchhhhhcccCCCcEEecCHH
Confidence 34578888888 99999999999999999999999863 245555642 156799999999
Q ss_pred HHHHHHHH
Q 045882 819 DVLALLKG 826 (832)
Q Consensus 819 eV~~~L~~ 826 (832)
|+.++|.+
T Consensus 170 el~~~l~~ 177 (179)
T 3l8h_A 170 AVAEQLLQ 177 (179)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99888754
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.90 E-value=3.4e-09 Score=107.64 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=64.4
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccce
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARY 812 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y 812 (832)
..+.+.+|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|++|.. +..|+|
T Consensus 137 ~~~~~kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~ 202 (226)
T 3mc1_A 137 LDGKLSTKEDVIRYAMESL---NIKSDDAIMIGDREYDVIGALKNNLP-----------SIGVTYGFGSYEELKNAGANY 202 (226)
T ss_dssp TTSSSCSHHHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHTTTCC-----------EEEESSSSSCHHHHHHHTCSE
T ss_pred CCCCCCCCHHHHHHHHHHh---CcCcccEEEECCCHHHHHHHHHCCCC-----------EEEEccCCCCHHHHHHcCCCE
Confidence 3467889999999999999 99999999999999999999999863 256666653 367899
Q ss_pred EeCChhHHHHHHHHhhh
Q 045882 813 YLDDEEDVLALLKGLAA 829 (832)
Q Consensus 813 ~l~~~~eV~~~L~~l~~ 829 (832)
++++.+++.++|.....
T Consensus 203 v~~s~~el~~~~~~~~~ 219 (226)
T 3mc1_A 203 IVNSVDELHKKILELRE 219 (226)
T ss_dssp EESSHHHHHHHHHTC--
T ss_pred EECCHHHHHHHHHHHhc
Confidence 99999999999887654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=5.6e-09 Score=104.92 Aligned_cols=69 Identities=19% Similarity=0.117 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCCh
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDE 817 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~ 817 (832)
.+..|..+++.+++.+ |++++++++|||+.||+.|++.+|.. +|.|++. +..|+|++++.
T Consensus 125 ~~kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~Di~~a~~aG~~-------------~i~v~~~~~~~~~~ad~v~~~~ 188 (205)
T 3m9l_A 125 PPKPHPGGLLKLAEAW---DVSPSRMVMVGDYRFDLDCGRAAGTR-------------TVLVNLPDNPWPELTDWHARDC 188 (205)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEECSSSSCSCGGGCSEECSSH
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCCE-------------EEEEeCCCCcccccCCEEeCCH
Confidence 4556788999999999 99999999999999999999999862 6666653 45699999999
Q ss_pred hHHHHHHHH
Q 045882 818 EDVLALLKG 826 (832)
Q Consensus 818 ~eV~~~L~~ 826 (832)
+|+...|+.
T Consensus 189 ~el~~~~~~ 197 (205)
T 3m9l_A 189 AQLRDLLSA 197 (205)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988875
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.82 E-value=9.4e-09 Score=104.80 Aligned_cols=71 Identities=14% Similarity=0.205 Sum_probs=57.5
Q ss_pred CHHHHHHHHHHhhhhCC--CCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc------cccceEeCC
Q 045882 745 TKGLVAEKVLSTMISDG--KLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKP------SKARYYLDD 816 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~g--i~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~------s~A~y~l~~ 816 (832)
.+..+++.+++.+ | ++++++++|||+.||+.|++.+|.. +++|..|... ..|+|++++
T Consensus 152 ~~~~~~~~~~~~l---g~~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~a~~v~~~ 217 (234)
T 2hcf_A 152 LPHIALERARRMT---GANYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKN 217 (234)
T ss_dssp HHHHHHHHHHHHH---CCCCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESC
T ss_pred hHHHHHHHHHHHh---CCCCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEeCC
Confidence 4567788889998 9 8999999999999999999999864 2455555421 238999999
Q ss_pred hhHHHHHHHHhhh
Q 045882 817 EEDVLALLKGLAA 829 (832)
Q Consensus 817 ~~eV~~~L~~l~~ 829 (832)
.+++.++|+.+..
T Consensus 218 ~~el~~~l~~~~~ 230 (234)
T 2hcf_A 218 FAETDEVLASILT 230 (234)
T ss_dssp SCCHHHHHHHHHC
T ss_pred HHhHHHHHHHHhc
Confidence 9999999988764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.81 E-value=1.6e-08 Score=103.54 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=62.1
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceE
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYY 813 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~ 813 (832)
.+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|++|.. ...|+|+
T Consensus 156 ~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~v 221 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGL---GIPPERCVVIGDGVPDAEMGRAAGMT-----------VIGVSYGVSGPDELMRAGADTV 221 (237)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCSEE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHhcCCCEE
Confidence 466888999999999999 99999999999999999999999964 256666642 2479999
Q ss_pred eCChhHHHHHHHH
Q 045882 814 LDDEEDVLALLKG 826 (832)
Q Consensus 814 l~~~~eV~~~L~~ 826 (832)
+++..++.++|+.
T Consensus 222 ~~~~~el~~~l~~ 234 (237)
T 4ex6_A 222 VDSFPAAVTAVLD 234 (237)
T ss_dssp ESSHHHHHHHHHH
T ss_pred ECCHHHHHHHHHc
Confidence 9999999988864
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.79 E-value=4.5e-09 Score=106.09 Aligned_cols=74 Identities=9% Similarity=0.073 Sum_probs=53.0
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC---c-----ccccce
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ---K-----PSKARY 812 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~---~-----~s~A~y 812 (832)
+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.++. . ...|+|
T Consensus 142 ~~~k~~~~~~~~~~~~~---~~~~~~~i~iGD~~nDi~~~~~aG~~-------------~~~~~~~~~~~~~l~~~~ad~ 205 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRL---KACPEEVLYIGDSTVDAGTAAAAGVS-------------FTGVTSGMTTAQEFQAYPYDR 205 (225)
T ss_dssp SSCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEEETTSSCCTTGGGGSCCSE
T ss_pred CCCCCChHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHCCCe-------------EEEECCCCCChHHHhhcCCCE
Confidence 45667889999999999 99999999999999999999999864 233322 1 123899
Q ss_pred EeCChhHHHHHHHHhhhh
Q 045882 813 YLDDEEDVLALLKGLAAA 830 (832)
Q Consensus 813 ~l~~~~eV~~~L~~l~~~ 830 (832)
++++.+++.++|+.+.+-
T Consensus 206 v~~~~~el~~~l~~~~~~ 223 (225)
T 3d6j_A 206 IISTLGQLISVPEDKSGC 223 (225)
T ss_dssp EESSGGGGC---------
T ss_pred EECCHHHHHHhhhhhcCC
Confidence 999999999998877653
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.2e-08 Score=103.83 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=54.4
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcE-EEEEeCCc-----ccccceEeCC
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEI-FACTVGQK-----PSKARYYLDD 816 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~-f~v~vG~~-----~s~A~y~l~~ 816 (832)
+-.|...++.+++.+ |++++++++|||+.||+.|.+.+|.. . +.|..|.. ...|+|++++
T Consensus 130 ~KP~p~~~~~~~~~l---gi~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~d~vi~~ 195 (211)
T 2gmw_A 130 RKPHPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG-----------TKVLVRTGKPITPEAENAADWVLNS 195 (211)
T ss_dssp STTSCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEESSSSCCCHHHHHHCSEEESC
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCc-----------eEEEEecCCCccccccCCCCEEeCC
Confidence 334567788889988 99999999999999999999999863 2 34444432 2358899999
Q ss_pred hhHHHHHHHH
Q 045882 817 EEDVLALLKG 826 (832)
Q Consensus 817 ~~eV~~~L~~ 826 (832)
..++.++|..
T Consensus 196 l~el~~~l~~ 205 (211)
T 2gmw_A 196 LADLPQAIKK 205 (211)
T ss_dssp GGGHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999888764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.6e-08 Score=102.04 Aligned_cols=68 Identities=18% Similarity=0.135 Sum_probs=53.7
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--cccccceEeCC-
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KPSKARYYLDD- 816 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~s~A~y~l~~- 816 (832)
.+.+.+|..+++.+++.+ |++++++++|||+.||++|++.+|.. +++ .+. .+..|+|++++
T Consensus 137 ~~~~k~k~~~~~~~~~~~---g~~~~~~i~vGDs~~Di~~a~~aG~~------------~~~-~~~~~l~~~ad~v~~~~ 200 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLL---NISKTNTLVVGDGANDLSMFKHAHIK------------IAF-NAKEVLKQHATHCINEP 200 (217)
T ss_dssp CCSTTHHHHHHHHHHHHH---TCCSTTEEEEECSGGGHHHHTTCSEE------------EEE-SCCHHHHTTCSEEECSS
T ss_pred CCCCCChHHHHHHHHHHc---CCCHhHEEEEeCCHHHHHHHHHCCCe------------EEE-CccHHHHHhcceeeccc
Confidence 456889999999999999 99999999999999999999999864 344 332 25779999864
Q ss_pred -hhHHHHH
Q 045882 817 -EEDVLAL 823 (832)
Q Consensus 817 -~~eV~~~ 823 (832)
-.++..+
T Consensus 201 dl~~~~~~ 208 (217)
T 3m1y_A 201 DLALIKPL 208 (217)
T ss_dssp BGGGGTTC
T ss_pred CHHHHHHH
Confidence 3444443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.74 E-value=2.6e-09 Score=111.85 Aligned_cols=76 Identities=16% Similarity=0.257 Sum_probs=63.6
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCc-ceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------------
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLP-DFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------------ 806 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~-d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------------ 806 (832)
.+.+.+|+.+++.+++++ |+++ +++++|||+.||++|++.+|.. +++|+.|..
T Consensus 156 ~~~~kp~~~~~~~~~~~l---gi~~~~~~i~iGD~~nDi~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~ 221 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVENM 221 (267)
T ss_dssp SSCCTTSSHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHh---CCCCCcCEEEEeCCHHHHHHHHHCCCE-----------EEEEcCCCCccCccHHHHhhc
Confidence 467889999999999999 9999 9999999999999999999863 255666643
Q ss_pred -----------------ccccceEeCChhHHHHHHHHhhh
Q 045882 807 -----------------PSKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 807 -----------------~s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
...|+|++++..++..+|..+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~~ 261 (267)
T 1swv_A 222 DSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEK 261 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHTC
T ss_pred hhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHHhh
Confidence 13489999999999999887653
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.74 E-value=8.4e-09 Score=105.17 Aligned_cols=74 Identities=15% Similarity=0.136 Sum_probs=61.5
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD 816 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~ 816 (832)
.+..|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|+. ...|+|++++
T Consensus 153 ~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~a~~~~~~ 218 (234)
T 3u26_A 153 FFKPHPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSD 218 (234)
T ss_dssp BCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECSSSTTGGGGGGCSEEESS
T ss_pred CCCcCHHHHHHHHHHc---CCCchhEEEEcCCcHHHHHHHHHcCCE-----------EEEECCCCCccccccCCCEeeCC
Confidence 3556788899999999 99999999999997 999999999864 245666653 2379999999
Q ss_pred hhHHHHHHHHhhh
Q 045882 817 EEDVLALLKGLAA 829 (832)
Q Consensus 817 ~~eV~~~L~~l~~ 829 (832)
..++..+|+.+..
T Consensus 219 ~~el~~~l~~~~~ 231 (234)
T 3u26_A 219 LREVIKIVDELNG 231 (234)
T ss_dssp THHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=5.9e-08 Score=102.70 Aligned_cols=72 Identities=8% Similarity=0.038 Sum_probs=58.6
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCc-ceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--------ccccc
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLP-DFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--------PSKAR 811 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~-d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--------~s~A~ 811 (832)
..+..|+.+++.+++.+ |+++ +++++|||+.||+.|.+.+|.+ .++.++.. ...|.
T Consensus 201 ~~~Kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~------------~~~~~~~~~~~~~~~~~~~ad 265 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKES---GLARYENAYFIDDSGKNIETGIKLGMK------------TCIHLVENEVNEILGQTPEGA 265 (282)
T ss_dssp CCCTTSHHHHHHHHHHH---TCCCGGGEEEEESCHHHHHHHHHHTCS------------EEEEECSCCC----CCCCTTC
T ss_pred cCCCcCHHHHHHHHHHc---CCCCcccEEEEcCCHHHHHHHHHCCCe------------EEEEEcCCccccccccCCCCC
Confidence 44567999999999999 9998 9999999999999999999974 34444432 34788
Q ss_pred eEeCChhHHHHHHHHh
Q 045882 812 YYLDDEEDVLALLKGL 827 (832)
Q Consensus 812 y~l~~~~eV~~~L~~l 827 (832)
|++++..++.++|..+
T Consensus 266 ~vi~sl~el~~~l~~l 281 (282)
T 3nuq_A 266 IVISDILELPHVVSDL 281 (282)
T ss_dssp EEESSGGGGGGTSGGG
T ss_pred EEeCCHHHHHHHhhhh
Confidence 9999999988877654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.70 E-value=6.9e-08 Score=101.04 Aligned_cols=76 Identities=13% Similarity=0.037 Sum_probs=64.1
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCc-ceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------------
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLP-DFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------------ 806 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~-d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------------ 806 (832)
.+.+..|+.+++.+++++ |+++ +++++|||+.||+.|.+.+|.. ++.|+.|..
T Consensus 164 ~~~~kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~-----------~v~v~~g~~~~~~~~~~~~~~ 229 (277)
T 3iru_A 164 VVRGRPFPDMALKVALEL---EVGHVNGCIKVDDTLPGIEEGLRAGMW-----------TVGVSCSGNEVGLDREDWQAL 229 (277)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCSCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECSSSTTTCCCHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHc---CCCCCccEEEEcCCHHHHHHHHHCCCe-----------EEEEecCCcccccchhhhhhc
Confidence 567889999999999999 9999 9999999999999999999863 356666621
Q ss_pred -----------------ccccceEeCChhHHHHHHHHhhh
Q 045882 807 -----------------PSKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 807 -----------------~s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
...|+|++++..++..+|..+..
T Consensus 230 ~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 230 SSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred chhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 24589999999999999887643
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.70 E-value=1.7e-07 Score=93.29 Aligned_cols=72 Identities=15% Similarity=0.052 Sum_probs=51.8
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCC---------------------CCCCCCCHHHHHHHHHhhccCCCeEEEEc
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHH---------------------ALIKKPSRDVIYVLRELCGDSNNTTFIVS 623 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~---------------------~~~~~~s~~~~~~L~~L~~d~g~~V~I~S 623 (832)
+..+.+...-.....|+|+||+||||++.. .....+.+.+.++|++| ++.|+.++|+|
T Consensus 13 ~~~~~~~~~~m~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~G~~v~ivT 91 (187)
T 2wm8_A 13 LGTENLYFQSMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRL-QSLGVPGAAAS 91 (187)
T ss_dssp -CHHHHHHHHHHTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHH-HHHTCCEEEEE
T ss_pred CCCchhHHHHHHhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHH-HHCCceEEEEe
Confidence 444444433333457899999999999421 01235678899999999 57799999999
Q ss_pred CCC-hhhHHHHhcCC
Q 045882 624 GRG-KVSLGEWLAPC 637 (832)
Q Consensus 624 GR~-~~~l~~~~~~l 637 (832)
|++ ...+..++..+
T Consensus 92 ~~~~~~~~~~~l~~~ 106 (187)
T 2wm8_A 92 RTSEIEGANQLLELF 106 (187)
T ss_dssp CCSCHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHc
Confidence 999 68887777654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.70 E-value=9.3e-08 Score=94.75 Aligned_cols=67 Identities=24% Similarity=0.425 Sum_probs=56.4
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCChh
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEE 818 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~ 818 (832)
..|...+|+.+++.+ +++++++|||+.||++|++.+|. +|.+++....|+|++++.+
T Consensus 134 ~~~~~~~k~~~l~~l---------~~~~~i~iGD~~~Di~~~~~ag~--------------~v~~~~~~~~ad~v~~~~~ 190 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF---------RDGFILAMGDGYADAKMFERADM--------------GIAVGREIPGADLLVKDLK 190 (201)
T ss_dssp EECCSSCHHHHHGGG---------TTSCEEEEECTTCCHHHHHHCSE--------------EEEESSCCTTCSEEESSHH
T ss_pred CcCCccCHHHHHHhc---------CcCcEEEEeCCHHHHHHHHhCCc--------------eEEECCCCccccEEEccHH
Confidence 556677899998876 57899999999999999999984 5677776559999999999
Q ss_pred HHHHHHHHhh
Q 045882 819 DVLALLKGLA 828 (832)
Q Consensus 819 eV~~~L~~l~ 828 (832)
++.++|+++.
T Consensus 191 el~~~l~~l~ 200 (201)
T 4ap9_A 191 ELVDFIKNLK 200 (201)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHHHhh
Confidence 9999998763
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.69 E-value=6.6e-10 Score=113.30 Aligned_cols=74 Identities=12% Similarity=-0.012 Sum_probs=59.5
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeC
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLD 815 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~ 815 (832)
+.+..|+.+++.+++.+ |++++++++|||+. ||+.|.+.+|.. ++.|.-|.. ...|.|+++
T Consensus 152 ~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~ 217 (230)
T 3vay_A 152 GIGKPDPAPFLEALRRA---KVDASAAVHVGDHPSDDIAGAQQAGMR-----------AIWYNPQGKAWDADRLPDAEIH 217 (230)
T ss_dssp TCCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCCSSSCCSEEES
T ss_pred CCCCcCHHHHHHHHHHh---CCCchheEEEeCChHHHHHHHHHCCCE-----------EEEEcCCCCCCcccCCCCeeEC
Confidence 44567799999999999 99999999999997 999999999864 123333322 457889999
Q ss_pred ChhHHHHHHHHhh
Q 045882 816 DEEDVLALLKGLA 828 (832)
Q Consensus 816 ~~~eV~~~L~~l~ 828 (832)
+..++.++|++++
T Consensus 218 ~l~el~~~l~~~~ 230 (230)
T 3vay_A 218 NLSQLPEVLARWA 230 (230)
T ss_dssp SGGGHHHHHHTTC
T ss_pred CHHHHHHHHHhhC
Confidence 9999999988653
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.65 E-value=1e-09 Score=109.03 Aligned_cols=63 Identities=11% Similarity=0.103 Sum_probs=52.8
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCChhHHHHHHH
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLK 825 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~ 825 (832)
..+++.+++.+ |++++++++|||+.||++|++.+|.. ++.+++..+.|.|++++..++.++|+
T Consensus 143 ~~~~~~~~~~~---~i~~~~~~~iGD~~nDi~~~~~aG~~-------------~i~~~~~~~~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 143 PEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-------------SINFLESTYEGNHRIQALADISRIFE 205 (207)
T ss_dssp SHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred cHHHHHHHHHh---CCCcccEEEECCCHHHHHHHHHCCCe-------------EEEEecCCCCCCEEeCCHHHHHHHHh
Confidence 88999999999 99999999999999999999999864 34454322378999999999887764
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-08 Score=102.99 Aligned_cols=69 Identities=10% Similarity=0.049 Sum_probs=52.6
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeCChhH
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLDDEED 819 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~~~~e 819 (832)
+..|..+++.+++++ |++++++++|||+.||++|++.+|.. ++.++.. + .|+|++++.++
T Consensus 144 ~Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~nDi~~a~~aG~~-------------~~~~~~~~~~~-~a~~v~~~~~e 206 (221)
T 2wf7_A 144 SKPAPDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGAL-------------PIGVGRPEDLG-DDIVIVPDTSH 206 (221)
T ss_dssp CTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEEESCHHHHC-SSSEEESSGGG
T ss_pred CCCChHHHHHHHHHc---CCChhHeEEEeCCHHHHHHHHHCCCE-------------EEEECCHHHhc-cccchhcCHHh
Confidence 334566999999999 99999999999999999999999964 2222221 3 79999987766
Q ss_pred --HHHHHHHhh
Q 045882 820 --VLALLKGLA 828 (832)
Q Consensus 820 --V~~~L~~l~ 828 (832)
|..+++.+.
T Consensus 207 l~~~~~~~~~~ 217 (221)
T 2wf7_A 207 YTLEFLKEVWL 217 (221)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHh
Confidence 566666554
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.63 E-value=6e-08 Score=101.99 Aligned_cols=209 Identities=13% Similarity=0.025 Sum_probs=113.8
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhc---CCC----CceEEEeCCEEEE
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLA---PCE----NLGIAAEHGYYLR 651 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~---~l~----~l~liaenGa~i~ 651 (832)
.|+|+||+||||++ ....+ +.+.++|++| ++.|+.|+++|||+......+.. .++ ...+++.||+.+.
T Consensus 1 ik~i~~D~DGtL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~~ 75 (263)
T 1zjj_A 1 MVAIIFDMDGVLYR---GNRAI-PGVRELIEFL-KERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRL 75 (263)
T ss_dssp CEEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHH
T ss_pred CeEEEEeCcCceEe---CCEeC-ccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHHH
Confidence 37999999999997 34434 6889999999 67899999999999765554433 332 1357888887653
Q ss_pred eC-----CCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEee-------cceeEEEEeccCCCCCCchhHHHHHHHH
Q 045882 652 WT-----KKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEK-------KETALVWHYQDAAPGFGSCQAKELLDHL 719 (832)
Q Consensus 652 ~~-----~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~-------k~~~l~~~~~~ad~~~~~~~a~el~~~l 719 (832)
.- ....+. ... +.+...++.+--..... .. ....+...+ ++......+.+.++.|
T Consensus 76 ~l~~~~~~~~v~v-iG~-------~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~v~~g~---~~~~~~~~~~~~l~~L 142 (263)
T 1zjj_A 76 YMSKHLDPGKIFV-IGG-------EGLVKEMQALGWGIVTL--DEARQGSWKEVKHVVVGL---DPDLTYEKLKYATLAI 142 (263)
T ss_dssp HHHHHSCCCCEEE-ESC-------HHHHHHHHHHTSCBCCH--HHHHTTGGGGCCEEEECC---CTTCBHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEE-EcC-------HHHHHHHHHcCCeeccC--CcccccccCCCCEEEEec---CCCCCHHHHHHHHHHH
Confidence 21 111221 111 12333333221000000 00 011122111 1222222344555544
Q ss_pred HHHhcCCCEEEEEcCe--EE---EEEeC-------------------CCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-
Q 045882 720 ESVLANEPVVVKRGYN--IV---EVKPQ-------------------GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR- 774 (832)
Q Consensus 720 ~~~l~~~~~~v~~g~~--~v---EV~p~-------------------gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~- 774 (832)
. .+..+ +.++.. +. .+.+. +--+....+.+++. ++++++++|||+.
T Consensus 143 ~---~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~-----~~~~~~~~VGD~~~ 213 (263)
T 1zjj_A 143 R---NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM-----FPGEELWMVGDRLD 213 (263)
T ss_dssp H---TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH-----STTCEEEEEESCTT
T ss_pred H---CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh-----CCcccEEEECCChH
Confidence 3 23334 333321 11 12221 11233444444443 5789999999994
Q ss_pred hhHHHHHHcccccCCCCCCCCCcEEEEEeCC--c------c--cccceEeCChhHHHHHHHHh
Q 045882 775 SDEDMFESISQATYGSSLPIAPEIFACTVGQ--K------P--SKARYYLDDEEDVLALLKGL 827 (832)
Q Consensus 775 ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~------~--s~A~y~l~~~~eV~~~L~~l 827 (832)
+|+.+-+.+|.. ++.|.. . . ..+.|++++..++.++|++|
T Consensus 214 ~Di~~A~~aG~~-------------~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~~l 263 (263)
T 1zjj_A 214 TDIAFAKKFGMK-------------AIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLKTL 263 (263)
T ss_dssp THHHHHHHTTCE-------------EEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC--
T ss_pred HHHHHHHHcCCe-------------EEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHhhC
Confidence 999999999863 555532 1 1 16889999999988776543
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.6e-07 Score=98.36 Aligned_cols=204 Identities=12% Similarity=0.085 Sum_probs=113.7
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC----CC----CceEEEeCCEE
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP----CE----NLGIAAEHGYY 649 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~----l~----~l~liaenGa~ 649 (832)
+.|+|+||+||||++ ....+ +.+.++|+.+ ++.|+.++++|||+......+... ++ ...+++.+|+.
T Consensus 4 ~~k~v~fDlDGTL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 78 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYL---GKEPI-PAGKRFVERL-QEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLAT 78 (264)
T ss_dssp SCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHH
T ss_pred cCCEEEEeCCCeEEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHH
Confidence 468999999999998 44445 7888999999 578999999999988766665442 22 13466666654
Q ss_pred EEeC-----CCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecc-eeEEEEeccCCCCCCchhHHHHHHHHHHHh
Q 045882 650 LRWT-----KKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKE-TALVWHYQDAAPGFGSCQAKELLDHLESVL 723 (832)
Q Consensus 650 i~~~-----~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~-~~l~~~~~~ad~~~~~~~a~el~~~l~~~l 723 (832)
+..- +...+. .. .+.+...++.+ |..+.... ..+...+. .......+.++++.|+
T Consensus 79 ~~~~~~~~~~~~~~~-~g-------~~~l~~~l~~~-----g~~~~~~~~~~v~~~~~---~~~~~~~~~~~l~~l~--- 139 (264)
T 1yv9_A 79 IDYMKEANRGKKVFV-IG-------EAGLIDLILEA-----GFEWDETNPDYVVVGLD---TELSYEKVVLATLAIQ--- 139 (264)
T ss_dssp HHHHHHHCCCSEEEE-ES-------CHHHHHHHHHT-----TCEECSSSCSEEEECCC---TTCCHHHHHHHHHHHH---
T ss_pred HHHHHhhCCCCEEEE-Ee-------CHHHHHHHHHc-----CCcccCCCCCEEEEECC---CCcCHHHHHHHHHHHh---
Confidence 3211 111111 00 01122222221 22111111 11111121 1112223444555443
Q ss_pred cCCCEEEEEcC-eEE----EEE-----------------eCCCCHH--HHHHHHHHhhhhCCCCcceEEEEeCC-hhhHH
Q 045882 724 ANEPVVVKRGY-NIV----EVK-----------------PQGVTKG--LVAEKVLSTMISDGKLPDFVLCVGDD-RSDED 778 (832)
Q Consensus 724 ~~~~~~v~~g~-~~v----EV~-----------------p~gvnKG--~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~ 778 (832)
.+..+ +.++. ... .+. +.+..|- .+.+.+++.+ |++++++++|||+ .||+.
T Consensus 140 ~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~ 215 (264)
T 1yv9_A 140 KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHL---GVEKEQVIMVGDNYETDIQ 215 (264)
T ss_dssp TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHH---CSCGGGEEEEESCTTTHHH
T ss_pred CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHH
Confidence 22333 33222 111 101 1123454 5888899999 9999999999999 69999
Q ss_pred HHHHcccccCCCCCCCCCcEEEEEeCCcc--------cccceEeCChhHH
Q 045882 779 MFESISQATYGSSLPIAPEIFACTVGQKP--------SKARYYLDDEEDV 820 (832)
Q Consensus 779 Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~--------s~A~y~l~~~~eV 820 (832)
|.+.+|.. .+.|..|... ..|+|++++..++
T Consensus 216 ~a~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el 254 (264)
T 1yv9_A 216 SGIQNGID-----------SLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 254 (264)
T ss_dssp HHHHHTCE-----------EEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred HHHHcCCc-----------EEEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence 99999863 1334444321 1588999887664
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=5.3e-08 Score=100.17 Aligned_cols=72 Identities=10% Similarity=-0.008 Sum_probs=56.1
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----cccc-ceEeCCh
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKA-RYYLDDE 817 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A-~y~l~~~ 817 (832)
+-.|..+.+.+++.+ |++++++++|||+.||+.|.+.+|.. ++.|..|.. ...| .|++++.
T Consensus 160 ~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~ 225 (240)
T 2no4_A 160 YKPDPRIYQFACDRL---GVNPNEVCFVSSNAWDLGGAGKFGFN-----------TVRINRQGNPPEYEFAPLKHQVNSL 225 (240)
T ss_dssp CTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCCTTSCCSEEESSG
T ss_pred CCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCceeeCCH
Confidence 345778889999999 99999999999999999999999864 234444432 2356 8999999
Q ss_pred hHHHHHHHHhh
Q 045882 818 EDVLALLKGLA 828 (832)
Q Consensus 818 ~eV~~~L~~l~ 828 (832)
.++..+|..++
T Consensus 226 ~el~~~l~~~~ 236 (240)
T 2no4_A 226 SELWPLLAKNV 236 (240)
T ss_dssp GGHHHHHCC--
T ss_pred HHHHHHHHHhh
Confidence 99999887665
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=7.2e-08 Score=101.40 Aligned_cols=60 Identities=22% Similarity=0.275 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChh
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEE 818 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~ 818 (832)
+|+.+++.+.+.+ .+++|||+.||++|++.+| ++|++|+. +..|++.+ ++.+
T Consensus 194 ~k~~~~k~~~~~~--------~~~~vGD~~nDi~~~~~Ag--------------~~va~~~~~~~~~~~a~~~~~~~~~~ 251 (280)
T 3skx_A 194 EKAEKVKEVQQKY--------VTAMVGDGVNDAPALAQAD--------------VGIAIGAGTDVAVETADIVLVRNDPR 251 (280)
T ss_dssp GHHHHHHHHHTTS--------CEEEEECTTTTHHHHHHSS--------------EEEECSCCSSSCCCSSSEECSSCCTH
T ss_pred HHHHHHHHHHhcC--------CEEEEeCCchhHHHHHhCC--------------ceEEecCCcHHHHhhCCEEEeCCCHH
Confidence 6999998887643 6899999999999999998 46777763 45688888 8899
Q ss_pred HHHHHHHH
Q 045882 819 DVLALLKG 826 (832)
Q Consensus 819 eV~~~L~~ 826 (832)
+|.++|+.
T Consensus 252 ~l~~~l~~ 259 (280)
T 3skx_A 252 DVAAIVEL 259 (280)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998874
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.61 E-value=8.5e-08 Score=98.50 Aligned_cols=76 Identities=14% Similarity=0.028 Sum_probs=63.9
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEe
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYL 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l 814 (832)
+.+..|+.+++.+++.+ |++++++++|||+.||+.|.+.+|.. ++.|..|.. ...|.|++
T Consensus 162 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 227 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKG---GFKPNEALVIENAPLGVQAGVAAGIF-----------TIAVNTGPLHDNVLLNEGANLLF 227 (247)
T ss_dssp SSCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTSE-----------EEEECCSSSCHHHHHTTTCSEEE
T ss_pred CCCCCCCHHHHHHHHHc---CCChhheEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHHhcCCCEEE
Confidence 56778899999999999 99999999999999999999999963 244444432 23799999
Q ss_pred CChhHHHHHHHHhhhh
Q 045882 815 DDEEDVLALLKGLAAA 830 (832)
Q Consensus 815 ~~~~eV~~~L~~l~~~ 830 (832)
++..++.++|+.+..+
T Consensus 228 ~~~~el~~~l~~~~~~ 243 (247)
T 3dv9_A 228 HSMPDFNKNWETLQSA 243 (247)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999988764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.60 E-value=6.7e-08 Score=99.58 Aligned_cols=74 Identities=9% Similarity=-0.005 Sum_probs=61.4
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEe
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYL 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l 814 (832)
+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|.. ...|+|++
T Consensus 163 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 228 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKG---GLKADEAVVIENAPLGVEAGHKAGIF-----------TIAVNTGPLDGQVLLDAGADLLF 228 (243)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCHHHHHHTTCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCCHHHHHhcCCCEEE
Confidence 56778899999999999 99999999999999999999999963 134444432 13699999
Q ss_pred CChhHHHHHHHHhh
Q 045882 815 DDEEDVLALLKGLA 828 (832)
Q Consensus 815 ~~~~eV~~~L~~l~ 828 (832)
++..++..+|+.|.
T Consensus 229 ~s~~el~~~l~~li 242 (243)
T 3qxg_A 229 PSMQTLCDSWDTIM 242 (243)
T ss_dssp SCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhh
Confidence 99999999998874
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.60 E-value=2.8e-08 Score=101.09 Aligned_cols=75 Identities=19% Similarity=0.107 Sum_probs=61.9
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC-c-----ccccceEe
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ-K-----PSKARYYL 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~-~-----~s~A~y~l 814 (832)
+.+..|+.+++.+++.+ |++++++++|||+.||+.|++.+|.. ++.|+.|. . ...|+|++
T Consensus 144 ~~~kp~~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~v~ 209 (233)
T 3s6j_A 144 SYGKPDPDLFLAAAKKI---GAPIDECLVIGDAIWDMLAARRCKAT-----------GVGLLSGGYDIGELERAGALRVY 209 (233)
T ss_dssp SCCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEEGGGSCCHHHHHHTTCSEEE
T ss_pred CCCCCChHHHHHHHHHh---CCCHHHEEEEeCCHHhHHHHHHCCCE-----------EEEEeCCCCchHhHHhcCCCEEE
Confidence 56778899999999999 99999999999999999999999863 24555552 2 23499999
Q ss_pred CChhHHHHHHHHhhh
Q 045882 815 DDEEDVLALLKGLAA 829 (832)
Q Consensus 815 ~~~~eV~~~L~~l~~ 829 (832)
++..++..+|++...
T Consensus 210 ~~~~el~~~l~~~~~ 224 (233)
T 3s6j_A 210 EDPLDLLNHLDEIAS 224 (233)
T ss_dssp SSHHHHHHTGGGTCC
T ss_pred CCHHHHHHHHHHHhh
Confidence 999999998876543
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.3e-06 Score=97.22 Aligned_cols=245 Identities=12% Similarity=0.071 Sum_probs=143.2
Q ss_pred HHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHH--hCCEEeecChhhH
Q 045882 189 DKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALL--NADLIGFHTFDYA 266 (832)
Q Consensus 189 ~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll--~~dligf~t~~~~ 266 (832)
+++++..+| |+|.+|+.-...++ .+..+..++|++ .++.+..+ |. .+..+++.+-+. .+|++...+....
T Consensus 87 ~~~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~-h~eaglrs---~~-~~~pee~nR~~~~~~a~~~~~~te~~~ 158 (385)
T 4hwg_A 87 DEVLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIF-HMEAGNRC---FD-QRVPEEINRKIIDHISDVNITLTEHAR 158 (385)
T ss_dssp HHHHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEE-EESCCCCC---SC-TTSTHHHHHHHHHHHCSEEEESSHHHH
T ss_pred HHHHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEE-EEeCCCcc---cc-ccCcHHHHHHHHHhhhceeecCCHHHH
Confidence 345567788 89999986555555 444445578875 34444322 11 133445555543 4888877888888
Q ss_pred HHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEee-cCCCchHHHhhcCCCChHHHHHHHHHHcC---CCEEEEEecc
Q 045882 267 RHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILH-VGIHMGRLESALNHPSSSIKVKEIREQFK---GKKVIVGVDD 342 (832)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P-~GId~~~~~~~~~~~~~~~~~~~l~~~~~---~~~vil~VdR 342 (832)
++|++ .|+.. + +|.+.+ +++|.-.+... .....+++++++ ++.+++..+|
T Consensus 159 ~~l~~-----~G~~~--~-------------~I~vtGnp~~D~~~~~~~------~~~~~~~~~~lgl~~~~~iLvt~hr 212 (385)
T 4hwg_A 159 RYLIA-----EGLPA--E-------------LTFKSGSHMPEVLDRFMP------KILKSDILDKLSLTPKQYFLISSHR 212 (385)
T ss_dssp HHHHH-----TTCCG--G-------------GEEECCCSHHHHHHHHHH------HHHHCCHHHHTTCCTTSEEEEEECC
T ss_pred HHHHH-----cCCCc--C-------------cEEEECCchHHHHHHhhh------hcchhHHHHHcCCCcCCEEEEEeCC
Confidence 87763 24321 1 122222 34553322110 011234555552 4567777888
Q ss_pred cc---ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH-hcccCCCCcccEEEecCC
Q 045882 343 MD---IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRI-NETYGVPGYEPVILIDRP 418 (832)
Q Consensus 343 ld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i-N~~~~~~~~~pv~~~~~~ 418 (832)
.. ..|++..+++|++++.+++ +++ +|.... +. ++ +.+++. +. .+ ....|. +.++
T Consensus 213 ~e~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~~------p~---~~----~~l~~~~~~-~~--~~~~v~-l~~~ 270 (385)
T 4hwg_A 213 EENVDVKNNLKELLNSLQMLIKEY-NFL----IIFSTH------PR---TK----KRLEDLEGF-KE--LGDKIR-FLPA 270 (385)
T ss_dssp C-----CHHHHHHHHHHHHHHHHH-CCE----EEEEEC------HH---HH----HHHHTSGGG-GG--TGGGEE-ECCC
T ss_pred chhcCcHHHHHHHHHHHHHHHhcC-CeE----EEEECC------hH---HH----HHHHHHHHH-hc--CCCCEE-EEcC
Confidence 54 4478999999999998765 443 443321 21 22 223322 10 11 122354 4557
Q ss_pred CCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC--CCceEeCC
Q 045882 419 VPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--SGAIRVNP 496 (832)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--~~a~~VnP 496 (832)
++..++..+|+.||+++..| |.+..||++++.| ++++-+.++..+.+ ..+++|.+
T Consensus 271 lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~P------------------vv~~~~~ter~e~v~~G~~~lv~~ 327 (385)
T 4hwg_A 271 FSFTDYVKLQMNAFCILSDS-----GTITEEASILNLP------------------ALNIREAHERPEGMDAGTLIMSGF 327 (385)
T ss_dssp CCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCC------------------EEECSSSCSCTHHHHHTCCEECCS
T ss_pred CCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCC------------------EEEcCCCccchhhhhcCceEEcCC
Confidence 88889999999999999777 4467999999653 23333433334444 33566754
Q ss_pred CCHHHHHHHHHHHhcCC
Q 045882 497 WDIDAVADALHDAITMS 513 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m~ 513 (832)
|.+++++++.++|+.+
T Consensus 328 -d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 328 -KAERVLQAVKTITEEH 343 (385)
T ss_dssp -SHHHHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHHHHhCh
Confidence 9999999999999754
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.59 E-value=2e-09 Score=109.72 Aligned_cols=72 Identities=13% Similarity=0.106 Sum_probs=57.2
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCCh
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDE 817 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~ 817 (832)
.-.|..+++.+++++ |++++++++|||+. ||++|++.+|.. ++.+.-|+. +..|.|++++.
T Consensus 157 ~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~nDi~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 222 (235)
T 2om6_A 157 YKPRKEMFEKVLNSF---EVKPEESLHIGDTYAEDYQGARKVGMW-----------AVWINQEGDKVRKLEERGFEIPSI 222 (235)
T ss_dssp CTTCHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTSE-----------EEEECTTCCSCEEEETTEEEESSG
T ss_pred CCCCHHHHHHHHHHc---CCCccceEEECCChHHHHHHHHHCCCE-----------EEEECCCCCCcccCCCCcchHhhH
Confidence 345788999999999 99999999999999 999999999974 122222432 23478899999
Q ss_pred hHHHHHHHHhh
Q 045882 818 EDVLALLKGLA 828 (832)
Q Consensus 818 ~eV~~~L~~l~ 828 (832)
.++..+|+.+.
T Consensus 223 ~el~~~l~~~~ 233 (235)
T 2om6_A 223 ANLKDVIELIS 233 (235)
T ss_dssp GGHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999998775
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.58 E-value=7.8e-08 Score=96.95 Aligned_cols=66 Identities=11% Similarity=-0.005 Sum_probs=51.6
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEe-CCc----ccccceEeCCh
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTV-GQK----PSKARYYLDDE 817 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v-G~~----~s~A~y~l~~~ 817 (832)
+.+|+.+++.+++++ |++++++++|||+.||++|++.+|.. +..|.- ++. +..|+|++++.
T Consensus 149 ~kp~~~~~~~~~~~~---~i~~~~~i~iGD~~nDi~~a~~aG~~-----------~~~~~~~~~~~~~~~~~a~~v~~~~ 214 (226)
T 1te2_A 149 SKPHPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMR-----------SIVVPAPEAQNDPRFVLANVKLSSL 214 (226)
T ss_dssp CTTSTHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTTTTCGGGGGSSEECSCG
T ss_pred CCCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCcccccccccCeEECCH
Confidence 334599999999999 99999999999999999999999864 112222 222 46789999998
Q ss_pred hHHHH
Q 045882 818 EDVLA 822 (832)
Q Consensus 818 ~eV~~ 822 (832)
+++..
T Consensus 215 ~el~~ 219 (226)
T 1te2_A 215 TELTA 219 (226)
T ss_dssp GGCCH
T ss_pred HHHhH
Confidence 88654
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.57 E-value=3.4e-08 Score=100.83 Aligned_cols=74 Identities=14% Similarity=0.006 Sum_probs=56.4
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcE-EEEEeCCc-----ccccceEeC
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEI-FACTVGQK-----PSKARYYLD 815 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~-f~v~vG~~-----~s~A~y~l~ 815 (832)
.+-.|..+++.+++.+ |++++++++|||+.||+.|.+.+|.. . +.|.-|.. ...+.|+++
T Consensus 135 ~~KP~~~~~~~~~~~~---~i~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~~~~i~ 200 (218)
T 2o2x_A 135 MRKPNPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSS 200 (218)
T ss_dssp TSTTSCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHH
T ss_pred cCCCCHHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHCCCC-----------EeEEEecCCCCcccccCCCCEecc
Confidence 3445667888999999 99999999999999999999999864 1 22322321 235777888
Q ss_pred ChhHHHHHHHHhhh
Q 045882 816 DEEDVLALLKGLAA 829 (832)
Q Consensus 816 ~~~eV~~~L~~l~~ 829 (832)
+..++..+|..+..
T Consensus 201 ~l~el~~~l~~~~~ 214 (218)
T 2o2x_A 201 ELGDLLAAIETLGR 214 (218)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHhc
Confidence 88899888887754
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.56 E-value=9.9e-08 Score=96.85 Aligned_cols=74 Identities=9% Similarity=-0.077 Sum_probs=58.1
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC-Cc----ccccceEeC
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG-QK----PSKARYYLD 815 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG-~~----~s~A~y~l~ 815 (832)
+.+..|..+++.+++++ |++++++++|||+.||+.|.+.+|.. ++.+.-| +. +..|.|+++
T Consensus 149 ~~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 214 (230)
T 3um9_A 149 RLFKPHQKVYELAMDTL---HLGESEILFVSCNSWDATGAKYFGYP-----------VCWINRSNGVFDQLGVVPDIVVS 214 (230)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCC-----------EEEECTTSCCCCCSSCCCSEEES
T ss_pred ccCCCChHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCccccccCCCcEEeC
Confidence 45667799999999999 99999999999999999999999974 1222222 21 357899999
Q ss_pred ChhHHHHHHHHhh
Q 045882 816 DEEDVLALLKGLA 828 (832)
Q Consensus 816 ~~~eV~~~L~~l~ 828 (832)
+..++..+|..+-
T Consensus 215 ~~~el~~~l~~~~ 227 (230)
T 3um9_A 215 DVGVLASRFSPVD 227 (230)
T ss_dssp SHHHHHHTCCC--
T ss_pred CHHHHHHHHHHhh
Confidence 9999998887654
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.55 E-value=5.9e-08 Score=92.10 Aligned_cols=69 Identities=22% Similarity=0.215 Sum_probs=51.9
Q ss_pred CcEEEEEecCCCcCCCCC-CCCCCCHHHHHHHHHhhccCCCeEEEEcCCC---hhhHHHHhcCCC-CceEEEeCC
Q 045882 578 SRRAIFLDYDGTVVPHHA-LIKKPSRDVIYVLRELCGDSNNTTFIVSGRG---KVSLGEWLAPCE-NLGIAAEHG 647 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~-~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~~~l~-~l~liaenG 647 (832)
+.|+|++|+||||+.... ....+.+.++++|++| ++.|+.|+|+|||+ ...+.+|+...+ ....++.|+
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l-~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~ 75 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDY 75 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSS
T ss_pred CCeEEEEECcCCCCCCCCccccccCHHHHHHHHHH-HHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCC
Confidence 368999999999998321 1123457899999999 68899999999998 567778887754 234666653
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.4e-07 Score=94.12 Aligned_cols=67 Identities=18% Similarity=0.136 Sum_probs=52.6
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC---cccccceEeCChhH
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ---KPSKARYYLDDEED 819 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~---~~s~A~y~l~~~~e 819 (832)
+..|+.+++.+++.+ |++++++++|||+.||+.|++.+|.. ++.+.-|. ....|.|++++..+
T Consensus 144 ~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~a~~~~~~~~e 209 (214)
T 3e58_A 144 SKPNPEIYLTALKQL---NVQASRALIIEDSEKGIAAGVAADVE-----------VWAIRDNEFGMDQSAAKGLLDSLTD 209 (214)
T ss_dssp CTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCCCCTTSSEEESSGGG
T ss_pred CCCChHHHHHHHHHc---CCChHHeEEEeccHhhHHHHHHCCCE-----------EEEECCCCccchhccHHHHHHHHHH
Confidence 445778899999999 99999999999999999999999964 12232221 24779999999888
Q ss_pred HHHH
Q 045882 820 VLAL 823 (832)
Q Consensus 820 V~~~ 823 (832)
+.++
T Consensus 210 l~~~ 213 (214)
T 3e58_A 210 VLDL 213 (214)
T ss_dssp GGGG
T ss_pred HHhh
Confidence 7654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.52 E-value=1.1e-07 Score=103.75 Aligned_cols=70 Identities=17% Similarity=0.129 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEe--CChhH
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYL--DDEED 819 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l--~~~~e 819 (832)
-.|+.+++.+++.+ |++++.+++|||+.||++|++.+|.+ +++ .+.. +..|++++ ++.++
T Consensus 244 kpk~~~~~~~~~~l---gi~~~~~v~vGDs~nDi~~a~~aG~~------------va~-~~~~~~~~~a~~v~~~~~l~~ 307 (335)
T 3n28_A 244 QTKADILLTLAQQY---DVEIHNTVAVGDGANDLVMMAAAGLG------------VAY-HAKPKVEAKAQTAVRFAGLGG 307 (335)
T ss_dssp HHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSEE------------EEE-SCCHHHHTTSSEEESSSCTHH
T ss_pred hhhHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe------------EEe-CCCHHHHhhCCEEEecCCHHH
Confidence 47999999999999 99999999999999999999999964 344 3331 46788877 46788
Q ss_pred HHHHHHHhhh
Q 045882 820 VLALLKGLAA 829 (832)
Q Consensus 820 V~~~L~~l~~ 829 (832)
|+.+|+....
T Consensus 308 v~~~L~~~l~ 317 (335)
T 3n28_A 308 VVCILSAALV 317 (335)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhHHH
Confidence 9999887653
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.51 E-value=1.4e-08 Score=103.57 Aligned_cols=76 Identities=11% Similarity=-0.018 Sum_probs=60.7
Q ss_pred eCCCCHHHHHHHHHHhhhhCC-CCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCC----cccccceEe
Q 045882 741 PQGVTKGLVAEKVLSTMISDG-KLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQ----KPSKARYYL 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~g-i~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~----~~s~A~y~l 814 (832)
..+..|+.+++.+++++ | ++++++++|||+. ||+.|.+.+|.. ++.+..|. .+..|.|++
T Consensus 155 ~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~ad~v~ 220 (238)
T 3ed5_A 155 GFQKPMKEYFNYVFERI---PQFSAEHTLIIGDSLTADIKGGQLAGLD-----------TCWMNPDMKPNVPEIIPTYEI 220 (238)
T ss_dssp TSCTTCHHHHHHHHHTS---TTCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCTTCCCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCChhHeEEECCCcHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCeEE
Confidence 45667899999999999 9 9999999999998 999999999964 13344442 245789999
Q ss_pred CChhHHHHHHHHhhhh
Q 045882 815 DDEEDVLALLKGLAAA 830 (832)
Q Consensus 815 ~~~~eV~~~L~~l~~~ 830 (832)
++..++.++|......
T Consensus 221 ~~~~el~~~l~~~~~~ 236 (238)
T 3ed5_A 221 RKLEELYHILNIENTV 236 (238)
T ss_dssp SSGGGHHHHHTCCCC-
T ss_pred CCHHHHHHHHHhhccC
Confidence 9999999998765433
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.7e-07 Score=96.32 Aligned_cols=72 Identities=24% Similarity=0.250 Sum_probs=60.2
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCC-cceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccc
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKL-PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKAR 811 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~-~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~ 811 (832)
..+.+..|+.+++.+++.+ |++ ++++++|||+.||+.|++.+|.. ++.|..|.. +..|.
T Consensus 161 ~~~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad 226 (240)
T 3sd7_A 161 LDGTRVNKNEVIQYVLDLC---NVKDKDKVIMVGDRKYDIIGAKKIGID-----------SIGVLYGYGSFEEISESEPT 226 (240)
T ss_dssp TTSCCCCHHHHHHHHHHHH---TCCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHCCS
T ss_pred ccCCCCCCHHHHHHHHHHc---CCCCCCcEEEECCCHHHHHHHHHCCCC-----------EEEEeCCCCCHHHHhhcCCC
Confidence 3466788999999999999 999 99999999999999999999863 245555542 26799
Q ss_pred eEeCChhHHHHHH
Q 045882 812 YYLDDEEDVLALL 824 (832)
Q Consensus 812 y~l~~~~eV~~~L 824 (832)
|++++..++.++|
T Consensus 227 ~v~~~~~el~~~l 239 (240)
T 3sd7_A 227 YIVENVESIKDIL 239 (240)
T ss_dssp EEESSSTTHHHHH
T ss_pred EEECCHHHHHHHh
Confidence 9999999988776
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.50 E-value=3e-07 Score=95.26 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----------ccccce-
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQK----------PSKARY- 812 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----------~s~A~y- 812 (832)
.++.+++.+++.+ |++++++++|||+. ||+.|++.+|... +.|.-|.. ...|.+
T Consensus 163 p~~~~~~~~~~~l---~~~~~~~i~iGD~~~~Di~~a~~aG~~~-----------~~v~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
T 2pke_A 163 KDPQTYARVLSEF---DLPAERFVMIGNSLRSDVEPVLAIGGWG-----------IYTPYAVTWAHEQDHGVAADEPRLR 228 (251)
T ss_dssp CSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHTTCEE-----------EECCCC-------------CCTTEE
T ss_pred CCHHHHHHHHHHh---CcCchhEEEECCCchhhHHHHHHCCCEE-----------EEECCCCccccccccccccCCCCee
Confidence 4688999999999 99999999999999 9999999999741 22222211 235787
Q ss_pred EeCChhHHHHHHHHhhh
Q 045882 813 YLDDEEDVLALLKGLAA 829 (832)
Q Consensus 813 ~l~~~~eV~~~L~~l~~ 829 (832)
.+++..++..+|..+..
T Consensus 229 ~i~~~~el~~~l~~~~~ 245 (251)
T 2pke_A 229 EVPDPSGWPAAVRALDA 245 (251)
T ss_dssp ECSSGGGHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHhCh
Confidence 89999999999887753
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.1e-08 Score=100.37 Aligned_cols=65 Identities=20% Similarity=0.195 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEe------CCc-----ccccc
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTV------GQK-----PSKAR 811 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v------G~~-----~s~A~ 811 (832)
-.|+.+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.+ |.. ...|.
T Consensus 157 kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~~Di~~a~~aG~~-------------~v~v~~~~~~g~~~~~~~~~~~d 220 (234)
T 3ddh_A 157 DKTEKEYLRLLSIL---QIAPSELLMVGNSFKSDIQPVLSLGGY-------------GVHIPFEVMWKHEVTETFAHERL 220 (234)
T ss_dssp CCSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHHTCE-------------EEECCCCTTCCCC---CCCCTTE
T ss_pred CCCHHHHHHHHHHh---CCCcceEEEECCCcHHHhHHHHHCCCe-------------EEEecCCcccccCCcccccCCCc
Confidence 36999999999999 99999999999996 999999999974 3333 322 23348
Q ss_pred eEeCChhHHHHHH
Q 045882 812 YYLDDEEDVLALL 824 (832)
Q Consensus 812 y~l~~~~eV~~~L 824 (832)
|++++..|+..+|
T Consensus 221 ~v~~~l~el~~~l 233 (234)
T 3ddh_A 221 KQVKRLDDLLSLL 233 (234)
T ss_dssp EECSSGGGHHHHC
T ss_pred eecccHHHHHHhc
Confidence 8899999998765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.9e-07 Score=93.69 Aligned_cols=73 Identities=14% Similarity=-0.007 Sum_probs=56.6
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEe-CCc----ccccceEeCC
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTV-GQK----PSKARYYLDD 816 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v-G~~----~s~A~y~l~~ 816 (832)
.+-.|..+++.+++.+ |++++++++|||+.||+.|.+.+|.. ++.|.- ++. +..|+|++++
T Consensus 153 ~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~~G~~-----------~~~v~~~~~~~~~~~~~~~~v~~~ 218 (233)
T 3umb_A 153 LYKTAPAAYALAPRAF---GVPAAQILFVSSNGWDACGATWHGFT-----------TFWINRLGHPPEALDVAPAAAGHD 218 (233)
T ss_dssp CCTTSHHHHTHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCSSSCCCSEEESS
T ss_pred CCCcCHHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCCchhccCCCCEEECC
Confidence 4455678999999999 99999999999999999999999864 112222 222 3469999999
Q ss_pred hhHHHHHHHHhh
Q 045882 817 EEDVLALLKGLA 828 (832)
Q Consensus 817 ~~eV~~~L~~l~ 828 (832)
..++.++|++..
T Consensus 219 ~~el~~~l~~~~ 230 (233)
T 3umb_A 219 MRDLLQFVQARQ 230 (233)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHHHhh
Confidence 999999987643
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.2e-06 Score=89.38 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHhhhhCC---CCcceEEEEeCChhhHHHHHHccc
Q 045882 743 GVTKGLVAEKVLSTMISDG---KLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~g---i~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+..|...++.+++.+ | ++++++++|||+.||++|++.++.
T Consensus 157 ~~~K~~~~~~~~~~~---~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 199 (232)
T 3fvv_A 157 REGKVVRVNQWLAGM---GLALGDFAESYFYSDSVNDVPLLEAVTR 199 (232)
T ss_dssp THHHHHHHHHHHHHT---TCCGGGSSEEEEEECCGGGHHHHHHSSE
T ss_pred chHHHHHHHHHHHHc---CCCcCchhheEEEeCCHhhHHHHHhCCC
Confidence 345777888888887 8 899999999999999999999985
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.44 E-value=5.2e-08 Score=103.00 Aligned_cols=66 Identities=12% Similarity=0.024 Sum_probs=53.2
Q ss_pred eCCCCHHHHHHHHHHhhhhCCC-------CcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----cc
Q 045882 741 PQGVTKGLVAEKVLSTMISDGK-------LPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PS 808 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi-------~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s 808 (832)
+.+..|+.++..+++.+ |+ +++++++|||+.||++|++.+|.. ++.|+.|.. +.
T Consensus 167 ~~~kp~~~~~~~~~~~l---gi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~-----------~i~v~~~~~~~~~~~~ 232 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGL---GFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCK-----------IVGIATTFDLDFLKEK 232 (275)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCE-----------EEEESSSSCHHHHTTS
T ss_pred CCCCCChHHHHHHHHHc---CCCccccCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhC
Confidence 56778999999999999 99 999999999999999999999864 234444432 34
Q ss_pred ccceEeCChhHH
Q 045882 809 KARYYLDDEEDV 820 (832)
Q Consensus 809 ~A~y~l~~~~eV 820 (832)
.|+|++++.+++
T Consensus 233 ~ad~v~~~~~el 244 (275)
T 2qlt_A 233 GCDIIVKNHESI 244 (275)
T ss_dssp SCSEEESSGGGE
T ss_pred CCCEEECChHHc
Confidence 589999887664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.43 E-value=1.3e-07 Score=98.45 Aligned_cols=73 Identities=14% Similarity=0.122 Sum_probs=60.0
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----------ccccc
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----------PSKAR 811 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----------~s~A~ 811 (832)
.+..|..+++.+++.+ |++++++++|||+.||+.|++.+|.. ++.|..|.. ...|+
T Consensus 166 ~~Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ad 231 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQL---GILPERCVVIEDSVTGGAAGLAAGAT-----------LWGLLVPGHPHPDGAAALSRLGAA 231 (259)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEECCTTSCCSSCHHHHHHHTCS
T ss_pred CCCCChHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCE-----------EEEEccCCCcccccHHHHHhcCcc
Confidence 5667799999999999 99999999999999999999999964 234444521 24589
Q ss_pred eEeCChhHHHHHHHHhh
Q 045882 812 YYLDDEEDVLALLKGLA 828 (832)
Q Consensus 812 y~l~~~~eV~~~L~~l~ 828 (832)
|++++..++.++|....
T Consensus 232 ~vi~~l~el~~~l~~~~ 248 (259)
T 4eek_A 232 RVLTSHAELRAALAEAG 248 (259)
T ss_dssp EEECSHHHHHHHHHHTT
T ss_pred hhhCCHHHHHHHHHhcc
Confidence 99999999999998753
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=91.16 Aligned_cols=74 Identities=15% Similarity=0.092 Sum_probs=58.0
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEe------------------
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTV------------------ 803 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v------------------ 803 (832)
.+..|..+.+.+++.+ |++++++++|||+.||+.|.+.+|.. ++.+.-
T Consensus 145 ~~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~l~~g~~~~~ 210 (253)
T 1qq5_A 145 VFKPHPDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-----------VARVARLSQEALARELVSGTIAPL 210 (253)
T ss_dssp CCTTSHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECCSCHHHHHHHTTSSSCCHH
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEEeCChhhHHHHHHCCCE-----------EEEECCcccchhhhhccccccccc
Confidence 4456778899999999 99999999999999999999999864 122222
Q ss_pred -----CC-----cccccceEeCChhHHHHHHHHhhh
Q 045882 804 -----GQ-----KPSKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 804 -----G~-----~~s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
|. .+..|+|++++..++..+|..+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 246 (253)
T 1qq5_A 211 TMFKALRMREETYAEAPDFVVPALGDLPRLVRGMAG 246 (253)
T ss_dssp HHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC-
T ss_pred ccccccccccCCCCCCCCeeeCCHHHHHHHHHHhcc
Confidence 10 135689999999999999988764
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.40 E-value=3.2e-07 Score=93.57 Aligned_cols=75 Identities=12% Similarity=0.008 Sum_probs=55.4
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC-Cc----ccccceEeC
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG-QK----PSKARYYLD 815 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG-~~----~s~A~y~l~ 815 (832)
..+-.|..+.+.+++.+ |++++++++|||+.||+.|.+.+|.. ++.+.-| +. +..|.|+++
T Consensus 148 ~~~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 213 (232)
T 1zrn_A 148 QVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-----------TCWINRTGNVFEEMGQTPDWEVT 213 (232)
T ss_dssp TCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-----------EEEECTTCCCCCSSSCCCSEEES
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCCccccCCCCCEEEC
Confidence 34567788999999999 99999999999999999999999864 1222222 11 356889999
Q ss_pred ChhHHHHHHHHhhh
Q 045882 816 DEEDVLALLKGLAA 829 (832)
Q Consensus 816 ~~~eV~~~L~~l~~ 829 (832)
+..++..+|..+..
T Consensus 214 ~~~el~~~l~~~~~ 227 (232)
T 1zrn_A 214 SLRAVVELFETAAG 227 (232)
T ss_dssp SHHHHHTTC-----
T ss_pred CHHHHHHHHHhhcc
Confidence 99999888876543
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=98.39 E-value=8.1e-07 Score=94.71 Aligned_cols=140 Identities=20% Similarity=0.196 Sum_probs=101.3
Q ss_pred HHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCE
Q 045882 569 RIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648 (832)
Q Consensus 569 ~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa 648 (832)
.+...|.....+++++|+|+++...-.....+-+.+.++|+.| ++.|+.++|+||++...+...+..++ +.
T Consensus 133 ~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L-~~~g~~~~i~T~~~~~~~~~~l~~~g-l~------- 203 (287)
T 3a1c_A 133 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISRELN-LD------- 203 (287)
T ss_dssp HHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHT-CS-------
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHhC-Cc-------
Confidence 4455666667899999999998752112345678999999999 67899999999999998888776532 10
Q ss_pred EEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCE
Q 045882 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPV 728 (832)
Q Consensus 649 ~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~ 728 (832)
. .+.
T Consensus 204 --------------------------------------~-----------~f~--------------------------- 207 (287)
T 3a1c_A 204 --------------------------------------L-----------VIA--------------------------- 207 (287)
T ss_dssp --------------------------------------E-----------EEC---------------------------
T ss_pred --------------------------------------e-----------eee---------------------------
Confidence 0 000
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--
Q 045882 729 VVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-- 806 (832)
Q Consensus 729 ~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-- 806 (832)
++.| .+|..+++.+ +.. +.+++|||+.||+.|++.+|. +|++|+.
T Consensus 208 ---------~i~~--~~K~~~~~~l-------~~~-~~~~~vGDs~~Di~~a~~ag~--------------~v~~~~~~~ 254 (287)
T 3a1c_A 208 ---------EVLP--HQKSEEVKKL-------QAK-EVVAFVGDGINDAPALAQADL--------------GIAVGSGSD 254 (287)
T ss_dssp ---------SCCT--TCHHHHHHHH-------TTT-CCEEEEECTTTCHHHHHHSSE--------------EEEECCCSC
T ss_pred ---------ecCh--HHHHHHHHHH-------hcC-CeEEEEECCHHHHHHHHHCCe--------------eEEeCCCCH
Confidence 0002 2676666554 667 899999999999999999985 4555542
Q ss_pred --ccccceEe--CChhHHHHHHHH
Q 045882 807 --PSKARYYL--DDEEDVLALLKG 826 (832)
Q Consensus 807 --~s~A~y~l--~~~~eV~~~L~~ 826 (832)
...|++++ ++..++..+|..
T Consensus 255 ~~~~~ad~v~~~~~~~~l~~~l~~ 278 (287)
T 3a1c_A 255 VAVESGDIVLIRDDLRDVVAAIQL 278 (287)
T ss_dssp CSSCCSSEEESSSCTHHHHHHHHT
T ss_pred HHHhhCCEEEeCCCHHHHHHHHHH
Confidence 35688999 888999887763
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=3.4e-06 Score=92.15 Aligned_cols=247 Identities=10% Similarity=0.040 Sum_probs=148.3
Q ss_pred HHHHhCCCCCEEEEeCccccc--HH-HHHHhh-cCCCeEEEEecCCCCChhhhhcCCc-hHHHHHHHHhCCEEeecChhh
Q 045882 191 IMEVINPEEDYVWIHDYHLMV--LP-TFLRRR-FHRVKLGFFLHSPFPSSEIYRTLPV-RNEILKALLNADLIGFHTFDY 265 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~l--lp-~~lr~~-~~~~~ig~flH~PfP~~e~~r~lp~-r~~il~~ll~~dligf~t~~~ 265 (832)
+...+++ +|+|.+|-..+.. ++ .++++. ..++|+.++.|--||-.-. .-+. ...-...+-.||.|..++...
T Consensus 68 ~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~--~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 68 IVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS--GNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG--GGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc--cchhhHHHHHHHHHHCCEEEECCHHH
Confidence 4455665 5999998665422 22 234432 1289999999976653210 0011 111123456799999999877
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCC-CchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecccc
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGI-HMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMD 344 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld 344 (832)
.+.+.+ .|+.. .+| .+.++ |.. . ..+. ....++++|+++||+.
T Consensus 145 ~~~l~~-----~G~~~---------------~ki--~~~~~~~~~--~---~~~~---------~~~~~~~~i~yaG~l~ 188 (339)
T 3rhz_A 145 IDKLRD-----FGMNV---------------SKT--VVQGMWDHP--T---QAPM---------FPAGLKREIHFPGNPE 188 (339)
T ss_dssp HHHHHH-----TTCCC---------------SEE--EECCSCCCC--C---CCCC---------CCCEEEEEEEECSCTT
T ss_pred HHHHHH-----cCCCc---------------Cce--eecCCCCcc--C---cccc---------cccCCCcEEEEeCCcc
Confidence 665543 13220 112 23333 211 0 0010 0113568999999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 045882 345 IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEK 424 (832)
Q Consensus 345 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el 424 (832)
...++. + + .|+++ |+++|.+. +. +. . .|.| .+.+|.+|+
T Consensus 189 k~~~L~----~---l---~~~~~----f~ivG~G~-----~~----------------~l---~--nV~f-~G~~~~~el 227 (339)
T 3rhz_A 189 RFSFVK----E---W---KYDIP----LKVYTWQN-----VE----------------LP---Q--NVHK-INYRPDEQL 227 (339)
T ss_dssp TCGGGG----G---C---CCSSC----EEEEESCC-----CC----------------CC---T--TEEE-EECCCHHHH
T ss_pred hhhHHH----h---C---CCCCe----EEEEeCCc-----cc----------------Cc---C--CEEE-eCCCCHHHH
Confidence 533221 1 1 46666 99998543 10 01 1 3665 468999999
Q ss_pred HHHHHhcCcceecccccC---------CCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---CCce
Q 045882 425 TAYYALAECCIVNAVRDG---------MNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL---SGAI 492 (832)
Q Consensus 425 ~aly~~ADv~vvtS~~EG---------mnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l---~~a~ 492 (832)
.++|+.||+.++. .+| ++....|||||+ .|+|++..++..+.+ ..|+
T Consensus 228 ~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G-------------------~PVI~~~~~~~~~~v~~~~~G~ 286 (339)
T 3rhz_A 228 LMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG-------------------IPVIVQEGIANQELIENNGLGW 286 (339)
T ss_dssp HHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT-------------------CCEEEETTCTTTHHHHHHTCEE
T ss_pred HHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC-------------------CCEEEccChhHHHHHHhCCeEE
Confidence 9999999998887 233 466789999994 468999988888877 2478
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHH
Q 045882 493 RVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQD 543 (832)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 543 (832)
.++ +.++++++|.. |.+++++.+.++.+++.......+..++-+.+
T Consensus 287 ~~~--~~~e~~~~i~~---l~~~~~~~m~~na~~~a~~~~~~~f~k~~l~~ 332 (339)
T 3rhz_A 287 IVK--DVEEAIMKVKN---VNEDEYIELVKNVRSFNPILRKGFFTRRLLTE 332 (339)
T ss_dssp EES--SHHHHHHHHHH---CCHHHHHHHHHHHHHHTHHHHTTHHHHHHHHH
T ss_pred EeC--CHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 776 58888888876 35667766666666665554444444444433
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.7e-06 Score=87.03 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=41.7
Q ss_pred cCcEEEEEecCCCcCCCCCC----------CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHH
Q 045882 577 TSRRAIFLDYDGTVVPHHAL----------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEW 633 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~----------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 633 (832)
+..|+||||+||||++.... ...+-+.+.++|+.| ++.|+.++|+||++...+.+.
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKAL-RDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHH-HHHTCCEEEECCSCHHHHHHH
T ss_pred CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHH-HHCCCEEEEEcCChHHHHHHh
Confidence 35689999999999973210 013457889999999 577999999999877665433
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.36 E-value=5e-07 Score=92.02 Aligned_cols=63 Identities=16% Similarity=0.121 Sum_probs=44.6
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--cccccceEeCChh
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KPSKARYYLDDEE 818 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~s~A~y~l~~~~ 818 (832)
..+..|..+++.+++.+ |++++++++|||+.||+.|++.+|.. ++.+.. ....|+|++++.+
T Consensus 143 ~~~Kp~~~~~~~~~~~l---gi~~~~~i~vGDs~~Di~~a~~aG~~-------------~~~~~~~~~~~~ad~v~~s~~ 206 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAML---DVSPADCAAIEDAEAGISAIKSAGMF-------------AVGVGQGQPMLGADLVVRQTS 206 (233)
T ss_dssp ------CCHHHHHHHHH---TSCGGGEEEEECSHHHHHHHHHTTCE-------------EEECC-------CSEECSSGG
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHcCCE-------------EEEECCccccccCCEEeCChH
Confidence 44556677999999999 99999999999999999999999963 333322 1237999998766
Q ss_pred H
Q 045882 819 D 819 (832)
Q Consensus 819 e 819 (832)
+
T Consensus 207 e 207 (233)
T 3nas_A 207 D 207 (233)
T ss_dssp G
T ss_pred h
Confidence 5
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.33 E-value=7.9e-07 Score=105.50 Aligned_cols=138 Identities=20% Similarity=0.215 Sum_probs=103.4
Q ss_pred HHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEE
Q 045882 570 IVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYY 649 (832)
Q Consensus 570 i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~ 649 (832)
..+.+.....+.+++.+||+++..-....++.+++.++|++| ++.|++++++||++...+......++-.
T Consensus 428 ~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L-~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--------- 497 (645)
T 3j08_A 428 ALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISRELNLD--------- 497 (645)
T ss_dssp HHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCS---------
T ss_pred HHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCC---------
Confidence 334555667788999999998752223456788999999999 6889999999999999888877654310
Q ss_pred EEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE
Q 045882 650 LRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVV 729 (832)
Q Consensus 650 i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~ 729 (832)
T Consensus 498 -------------------------------------------------------------------------------- 497 (645)
T 3j08_A 498 -------------------------------------------------------------------------------- 497 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---
Q 045882 730 VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--- 806 (832)
Q Consensus 730 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--- 806 (832)
..+.++.| .+|+.+++.+.+ . +.|+++||+.||.+|++.++ +++++|+.
T Consensus 498 ----~~~~~~~P--~~K~~~v~~l~~-------~-~~v~~vGDg~ND~~al~~A~--------------vgiamg~g~~~ 549 (645)
T 3j08_A 498 ----LVIAEVLP--HQKSEEVKKLQA-------K-EVVAFVGDGINDAPALAQAD--------------LGIAVGSGSDV 549 (645)
T ss_dssp ----EEECSCCT--TCHHHHHHHHTT-------T-CCEEEEECSSSCHHHHHHSS--------------EEEEECCCSCC
T ss_pred ----EEEEeCCH--HhHHHHHHHHhh-------C-CeEEEEeCCHhHHHHHHhCC--------------EEEEeCCCcHH
Confidence 00111123 389999988743 2 78999999999999999998 57777763
Q ss_pred -ccccceEe--CChhHHHHHHH
Q 045882 807 -PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 807 -~s~A~y~l--~~~~eV~~~L~ 825 (832)
+..|++++ ++.+++.++++
T Consensus 550 a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 550 AVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp SSCCSSSEESSCCTTHHHHHHH
T ss_pred HHHhCCEEEecCCHHHHHHHHH
Confidence 57789998 67888887775
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.30 E-value=3.4e-06 Score=83.93 Aligned_cols=66 Identities=17% Similarity=0.054 Sum_probs=50.7
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc----------cccceEeC
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQATYGSSLPIAPEIFACTVGQKP----------SKARYYLD 815 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~----------s~A~y~l~ 815 (832)
....+.+++.+ |++++++++|||+ .+|+.+-+.+|.. +|.+.... ..+.++++
T Consensus 100 p~~~~~~~~~~---~~~~~~~l~VGD~~~~Di~~A~~aG~~-------------~i~v~~~~~~~~~~~~~~~~~~~v~~ 163 (189)
T 3ib6_A 100 KTIFDFTLNAL---QIDKTEAVMVGNTFESDIIGANRAGIH-------------AIWLQNPEVCLQDERLPLVAPPFVIP 163 (189)
T ss_dssp HHHHHHHHHHH---TCCGGGEEEEESBTTTTHHHHHHTTCE-------------EEEECCTTTCBCSSCCCBCSSSCEEE
T ss_pred HHHHHHHHHHc---CCCcccEEEECCCcHHHHHHHHHCCCe-------------EEEECCccccccccccccCCCcceec
Confidence 35667778888 9999999999999 7999999999863 44443321 27788888
Q ss_pred --ChhHHHHHHHHhh
Q 045882 816 --DEEDVLALLKGLA 828 (832)
Q Consensus 816 --~~~eV~~~L~~l~ 828 (832)
+..++.++|+-+-
T Consensus 164 ~~~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 164 VWDLADVPEALLLLK 178 (189)
T ss_dssp ESSGGGHHHHHHHHH
T ss_pred cccHHhHHHHHHHHH
Confidence 8888888876543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.29 E-value=2.8e-06 Score=85.60 Aligned_cols=70 Identities=23% Similarity=0.234 Sum_probs=57.8
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEe
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYL 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l 814 (832)
+.+-.|..+...+++++ |++++++++|||+.||+.|.+.+|.. +++|+.|.. ...|+|++
T Consensus 134 ~~~Kp~p~~~~~~~~~l---g~~p~~~~~vgDs~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~a~~v~ 199 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEE
Confidence 56778999999999999 99999999999999999999999863 245555542 23588999
Q ss_pred CChhHHHHHH
Q 045882 815 DDEEDVLALL 824 (832)
Q Consensus 815 ~~~~eV~~~L 824 (832)
++..++..+|
T Consensus 200 ~~~~el~~~l 209 (210)
T 2ah5_A 200 HKPLEVLAYF 209 (210)
T ss_dssp SSTTHHHHHT
T ss_pred CCHHHHHHHh
Confidence 9999887654
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.7e-06 Score=103.94 Aligned_cols=139 Identities=20% Similarity=0.208 Sum_probs=104.3
Q ss_pred HHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCE
Q 045882 569 RIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGY 648 (832)
Q Consensus 569 ~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa 648 (832)
...+.+.....+.+++.+||+++..-....++.+++.++|++| ++.|+.++++||+....+......++-.
T Consensus 505 ~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l-~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-------- 575 (723)
T 3j09_A 505 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISRELNLD-------- 575 (723)
T ss_dssp HHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCS--------
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCc--------
Confidence 3344556677899999999998852223456788999999999 7889999999999999888777654311
Q ss_pred EEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCE
Q 045882 649 YLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPV 728 (832)
Q Consensus 649 ~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~ 728 (832)
T Consensus 576 -------------------------------------------------------------------------------- 575 (723)
T 3j09_A 576 -------------------------------------------------------------------------------- 575 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--
Q 045882 729 VVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-- 806 (832)
Q Consensus 729 ~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-- 806 (832)
..+.++.| .+|+.+++.+.+ . +.|+++||+.||.+||+.++ +++++|+.
T Consensus 576 -----~~~~~~~P--~~K~~~v~~l~~-------~-~~v~~vGDg~ND~~al~~A~--------------vgiamg~g~~ 626 (723)
T 3j09_A 576 -----LVIAEVLP--HQKSEEVKKLQA-------K-EVVAFVGDGINDAPALAQAD--------------LGIAVGSGSD 626 (723)
T ss_dssp -----EEECSCCT--TCHHHHHHHHTT-------T-CCEEEEECSSTTHHHHHHSS--------------EEEECCCCSC
T ss_pred -----EEEccCCH--HHHHHHHHHHhc-------C-CeEEEEECChhhHHHHhhCC--------------EEEEeCCCcH
Confidence 00111112 279999888743 2 78999999999999999998 57788763
Q ss_pred --ccccceEe--CChhHHHHHHH
Q 045882 807 --PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 807 --~s~A~y~l--~~~~eV~~~L~ 825 (832)
+..|++++ ++.+++.++++
T Consensus 627 ~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 627 VAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp CSSCCSSEECSSCCTTHHHHHHH
T ss_pred HHHHhCCEEEeCCCHHHHHHHHH
Confidence 57889998 67788887776
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.9e-06 Score=97.00 Aligned_cols=66 Identities=23% Similarity=0.197 Sum_probs=52.8
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeC--Ch
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLD--DE 817 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~--~~ 817 (832)
+-.|..+++.+++.+ |++++++++|||+.||++|++.+|. ++.++.+ +..|++.++ +.
T Consensus 321 ~kpk~~~~~~~~~~~---gi~~~~~i~vGD~~~Di~~a~~aG~--------------~va~~~~~~~~~~ad~~i~~~~l 383 (415)
T 3p96_A 321 RAGKATALREFAQRA---GVPMAQTVAVGDGANDIDMLAAAGL--------------GIAFNAKPALREVADASLSHPYL 383 (415)
T ss_dssp HHHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCSEEECSSCT
T ss_pred CcchHHHHHHHHHHc---CcChhhEEEEECCHHHHHHHHHCCC--------------eEEECCCHHHHHhCCEEEccCCH
Confidence 346888999999999 9999999999999999999999985 3444433 467888875 56
Q ss_pred hHHHHHHH
Q 045882 818 EDVLALLK 825 (832)
Q Consensus 818 ~eV~~~L~ 825 (832)
++++.+|.
T Consensus 384 ~~ll~~l~ 391 (415)
T 3p96_A 384 DTVLFLLG 391 (415)
T ss_dssp THHHHHTT
T ss_pred HHHHHHhC
Confidence 77777663
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.8e-07 Score=93.77 Aligned_cols=73 Identities=8% Similarity=0.036 Sum_probs=54.1
Q ss_pred eCCCCHH---HHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEe-------CC----
Q 045882 741 PQGVTKG---LVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTV-------GQ---- 805 (832)
Q Consensus 741 p~gvnKG---~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v-------G~---- 805 (832)
...-++. .+++. ++++ |++++++++|||+. ||+.|.+.+|... +.+.- |+
T Consensus 150 ~~KP~~~~~~~~l~~-~~~l---gi~~~~~~~vGD~~~~Di~~a~~aG~~~-----------~~~~~~~~~~g~g~~~~~ 214 (240)
T 3smv_A 150 SYKPNPNNFTYMIDA-LAKA---GIEKKDILHTAESLYHDHIPANDAGLVS-----------AWIYRRHGKEGYGATHVP 214 (240)
T ss_dssp SCTTSHHHHHHHHHH-HHHT---TCCGGGEEEEESCTTTTHHHHHHHTCEE-----------EEECTTCC-------CCC
T ss_pred CCCCCHHHHHHHHHH-HHhc---CCCchhEEEECCCchhhhHHHHHcCCeE-----------EEEcCCCcccCCCCCCCC
Confidence 3344555 45555 7888 99999999999995 9999999999741 11111 21
Q ss_pred -cccccceEeCChhHHHHHHHHhh
Q 045882 806 -KPSKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 806 -~~s~A~y~l~~~~eV~~~L~~l~ 828 (832)
+...|+|++++..++.++|+.+.
T Consensus 215 ~~~~~ad~v~~~~~el~~~l~~~l 238 (240)
T 3smv_A 215 SRMPNVDFRFNSMGEMAEAHKQAL 238 (240)
T ss_dssp SSCCCCSEEESSHHHHHHHHHHHH
T ss_pred cCCCCCCEEeCCHHHHHHHHHHHh
Confidence 24789999999999999998764
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2.9e-06 Score=84.59 Aligned_cols=67 Identities=10% Similarity=0.041 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC-Cc----ccccceEeCChhH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG-QK----PSKARYYLDDEED 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG-~~----~s~A~y~l~~~~e 819 (832)
.|..+++.+++.+ | ++++++|||+.||+.|.+.+|.. ++.+.-| +. ...|.+++++..+
T Consensus 129 p~~~~~~~~~~~~---~--~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~e 192 (201)
T 2w43_A 129 PSPKVYKYFLDSI---G--AKEAFLVSSNAFDVIGAKNAGMR-----------SIFVNRKNTIVDPIGGKPDVIVNDFKE 192 (201)
T ss_dssp TCHHHHHHHHHHH---T--CSCCEEEESCHHHHHHHHHTTCE-----------EEEECSSSCCCCTTSCCCSEEESSHHH
T ss_pred CCHHHHHHHHHhc---C--CCcEEEEeCCHHHhHHHHHCCCE-----------EEEECCCCCCccccCCCCCEEECCHHH
Confidence 4589999999998 7 89999999999999999999864 1223222 21 2458899999999
Q ss_pred HHHHHHHh
Q 045882 820 VLALLKGL 827 (832)
Q Consensus 820 V~~~L~~l 827 (832)
+..+|..+
T Consensus 193 l~~~l~~~ 200 (201)
T 2w43_A 193 LYEWILRY 200 (201)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99888765
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.20 E-value=3.1e-06 Score=91.71 Aligned_cols=64 Identities=17% Similarity=0.200 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeC--ChhH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLD--DEED 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~--~~~e 819 (832)
.|..+++.+++.+ |++++++++|||+.||++|++.+|. ++.++.+ ...|++.++ +..+
T Consensus 246 pkp~~~~~~~~~l---gv~~~~~i~VGDs~~Di~aa~~AG~--------------~va~~~~~~~~~~a~~~i~~~~L~~ 308 (317)
T 4eze_A 246 NKKQTLVDLAARL---NIATENIIACGDGANDLPMLEHAGT--------------GIAWKAKPVVREKIHHQINYHGFEL 308 (317)
T ss_dssp HHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCCEEESSSCGGG
T ss_pred CCHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHCCC--------------eEEeCCCHHHHHhcCeeeCCCCHHH
Confidence 5788889999998 9999999999999999999999985 4445543 355777664 5666
Q ss_pred HHHHHH
Q 045882 820 VLALLK 825 (832)
Q Consensus 820 V~~~L~ 825 (832)
++.+|+
T Consensus 309 ll~~L~ 314 (317)
T 4eze_A 309 LLFLIE 314 (317)
T ss_dssp GGGGTC
T ss_pred HHHHHH
Confidence 666553
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.7e-06 Score=103.70 Aligned_cols=138 Identities=15% Similarity=0.181 Sum_probs=101.9
Q ss_pred HHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEE
Q 045882 571 VDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYL 650 (832)
Q Consensus 571 ~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i 650 (832)
.+.+.....+.+++.+||+++..-.....+.+++.++|++| ++.|+.++++|||+...+.....+++-..
T Consensus 526 ~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L-~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~--------- 595 (736)
T 3rfu_A 526 ADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILEL-QQSGIEIVMLTGDSKRTAEAVAGTLGIKK--------- 595 (736)
T ss_dssp HHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHHHHTCCC---------
T ss_pred HHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcCCCE---------
Confidence 45566677899999999998752213456778999999999 67899999999999999888776653110
Q ss_pred EeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEE
Q 045882 651 RWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVV 730 (832)
Q Consensus 651 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v 730 (832)
+
T Consensus 596 -----------------------------------------------v-------------------------------- 596 (736)
T 3rfu_A 596 -----------------------------------------------V-------------------------------- 596 (736)
T ss_dssp -----------------------------------------------E--------------------------------
T ss_pred -----------------------------------------------E--------------------------------
Confidence 0
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----
Q 045882 731 KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---- 806 (832)
Q Consensus 731 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---- 806 (832)
+.++.|. +|...++.+.+. ...|+++||+.||.+||+.++ +++++|+.
T Consensus 597 -----~a~~~P~--~K~~~v~~l~~~-------g~~V~~vGDG~ND~paL~~Ad--------------vGIAmg~g~d~a 648 (736)
T 3rfu_A 597 -----VAEIMPE--DKSRIVSELKDK-------GLIVAMAGDGVNDAPALAKAD--------------IGIAMGTGTDVA 648 (736)
T ss_dssp -----ECSCCHH--HHHHHHHHHHHH-------SCCEEEEECSSTTHHHHHHSS--------------EEEEESSSCSHH
T ss_pred -----EEecCHH--HHHHHHHHHHhc-------CCEEEEEECChHhHHHHHhCC--------------EEEEeCCccHHH
Confidence 0011121 477777777654 256999999999999999998 57888864
Q ss_pred ccccceEe--CChhHHHHHHH
Q 045882 807 PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 807 ~s~A~y~l--~~~~eV~~~L~ 825 (832)
+..|++++ ++.++|.+.++
T Consensus 649 ~~~AD~vl~~~~~~~i~~ai~ 669 (736)
T 3rfu_A 649 IESAGVTLLHGDLRGIAKARR 669 (736)
T ss_dssp HHHCSEEECSCCSTTHHHHHH
T ss_pred HHhCCEEEccCCHHHHHHHHH
Confidence 56789988 56777777665
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.13 E-value=7e-06 Score=82.08 Aligned_cols=69 Identities=14% Similarity=0.069 Sum_probs=51.5
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---cccc-ceE-e
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKA-RYY-L 814 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A-~y~-l 814 (832)
+|+...|..+++.+ +..++++++|||+.||+.|++.+|.. +.++.. ...+ .+. +
T Consensus 128 ~p~p~~~~~~l~~l-------~~~~~~~~~iGD~~~Di~~a~~aG~~--------------~~~~~~~~~~~~~~~~~~~ 186 (206)
T 1rku_A 128 LRQKDPKRQSVIAF-------KSLYYRVIAAGDSYNDTTMLSEAHAG--------------ILFHAPENVIREFPQFPAV 186 (206)
T ss_dssp CCSSSHHHHHHHHH-------HHTTCEEEEEECSSTTHHHHHHSSEE--------------EEESCCHHHHHHCTTSCEE
T ss_pred cCCCchHHHHHHHH-------HhcCCEEEEEeCChhhHHHHHhcCcc--------------EEECCcHHHHHHHhhhccc
Confidence 48888888888776 44578999999999999999999853 334432 1223 443 7
Q ss_pred CChhHHHHHHHHhhh
Q 045882 815 DDEEDVLALLKGLAA 829 (832)
Q Consensus 815 ~~~~eV~~~L~~l~~ 829 (832)
++..++..+|+.+..
T Consensus 187 ~~~~~l~~~l~~~~~ 201 (206)
T 1rku_A 187 HTYEDLKREFLKASS 201 (206)
T ss_dssp CSHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHhc
Confidence 899999999988754
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.10 E-value=2.2e-06 Score=79.80 Aligned_cols=50 Identities=26% Similarity=0.310 Sum_probs=40.1
Q ss_pred cEEEEEecCCCcCCCCCC---CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhh
Q 045882 579 RRAIFLDYDGTVVPHHAL---IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS 629 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~---~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 629 (832)
.|+|++|+||||++.... ...+++.+.++|++| +++|+.++|+|||+...
T Consensus 1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l-~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARNMRT 53 (126)
T ss_dssp CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTTTTT
T ss_pred CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHH-HhCCCeEEEEeCCChhh
Confidence 379999999999983210 015779999999999 67899999999998754
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=98.09 E-value=2.1e-05 Score=83.29 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=45.6
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcC---CChhhHHHHhcCCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSG---RGKVSLGEWLAPCE 638 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~ 638 (832)
+.|+|+||+||||++ . ..+.+.+.++|++| ++.|+.++++|| |+...+.+.+..++
T Consensus 13 ~~k~i~~D~DGtL~~---~-~~~~~~~~~~l~~l-~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg 71 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKT---Y-NGLLPGIENTFDYL-KAQGQDYYIVTNDASRSPEQLADSYHKLG 71 (284)
T ss_dssp GCSEEEECSBTTTEE---T-TEECTTHHHHHHHH-HHTTCEEEEEECCCSSCHHHHHHHHHHTT
T ss_pred cCCEEEEcCcCCcCc---C-CeeChhHHHHHHHH-HHCCCEEEEEeCCCCcCHHHHHHHHHHCC
Confidence 468999999999998 3 33557889999999 678999999995 88887777776543
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.08 E-value=3.7e-06 Score=78.07 Aligned_cols=52 Identities=17% Similarity=0.137 Sum_probs=42.7
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLA 635 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 635 (832)
.|+|++|+||||.. ...+.+.+.++|++| ++.|+.++|+|+++...+...+.
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L-~~~G~~~~i~S~~~~~~~~~~l~ 53 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAA-KKNGVGTVILSNDPGGLGAAPIR 53 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHH-HHTTCEEEEEECSCCGGGGHHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHH
Confidence 47899999999954 445678899999999 67899999999998877665554
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.07 E-value=4e-07 Score=94.25 Aligned_cols=66 Identities=26% Similarity=0.300 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC------cccccceEeCChh
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ------KPSKARYYLDDEE 818 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~------~~s~A~y~l~~~~ 818 (832)
.|+.+++.+++.+ |++++++++|||+.||+.|++.+|.. ++.|..|. ....|+|++++..
T Consensus 171 p~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~vi~~~~ 236 (243)
T 2hsz_A 171 PHPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNYNIPIAQSKPDWIFDDFA 236 (243)
T ss_dssp TSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCSTTCCGGGGCCSEEESSGG
T ss_pred cCHHHHHHHHHHh---CcChhhEEEEcCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhhhCCCCEEECCHH
Confidence 3678899999999 99999999999999999999999864 23444442 1356889999888
Q ss_pred HHHHHH
Q 045882 819 DVLALL 824 (832)
Q Consensus 819 eV~~~L 824 (832)
++.++|
T Consensus 237 el~~~l 242 (243)
T 2hsz_A 237 DILKIT 242 (243)
T ss_dssp GGGGGT
T ss_pred HHHHHh
Confidence 876554
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1.1e-05 Score=81.76 Aligned_cols=62 Identities=19% Similarity=0.318 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChh
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEE 818 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~ 818 (832)
.|..+++.+++.+ |+ +.+++|||+.||+.|.+.+|. +|.+|.. ...|.|++++..
T Consensus 157 ~Kp~~~~~~~~~~---~~--~~~~~vGDs~~Di~~a~~ag~--------------~i~~~~~~~~~~~~~~~~~~~~~~~ 217 (225)
T 1nnl_A 157 GKGKVIKLLKEKF---HF--KKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITDFV 217 (225)
T ss_dssp HHHHHHHHHHHHH---CC--SCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESCGG
T ss_pred chHHHHHHHHHHc---CC--CcEEEEeCcHHhHHHHHhCCe--------------EEEecCccccHHHHhcCCeeecCHH
Confidence 6888889998888 76 789999999999999888863 5556642 235889999988
Q ss_pred HHHHHHH
Q 045882 819 DVLALLK 825 (832)
Q Consensus 819 eV~~~L~ 825 (832)
++..+|.
T Consensus 218 el~~~l~ 224 (225)
T 1nnl_A 218 ELLGELE 224 (225)
T ss_dssp GGCC---
T ss_pred HHHHHHh
Confidence 8876654
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.98 E-value=3.7e-05 Score=96.03 Aligned_cols=165 Identities=17% Similarity=0.223 Sum_probs=93.7
Q ss_pred CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHH
Q 045882 596 LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEP 675 (832)
Q Consensus 596 ~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~ 675 (832)
...+|.+++.++|++| ++.|+.|+++|||....+.....+++ +..+++.. +..
T Consensus 601 i~Dp~r~~~~~aI~~l-~~aGI~vvmiTGd~~~tA~~ia~~lg---i~~~~~~~-----------------------i~~ 653 (1034)
T 3ixz_A 601 MIDPPRATVPDAVLKC-RTAGIRVIMVTGDHPITAKAIAASVG---IISEGSET-----------------------VED 653 (1034)
T ss_pred ccCCCchhHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcC---CCCCCchH-----------------------HHH
Confidence 3456889999999999 78999999999999999988887653 32222211 011
Q ss_pred HHHHHHhcCCceEEeec-ceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHH
Q 045882 676 VMKLYTEATDGSYIEKK-ETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVL 754 (832)
Q Consensus 676 i~~~~~e~~~gs~ie~k-~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll 754 (832)
+.+.. ..+......+ .......-.. +.....+++. +.+...+..+ +..+.| ..|...++.+.
T Consensus 654 ~~~~~--~~~~~~~~~~~~~~~~~~g~~----l~~~~~~~l~----~~~~~~~~~v-----~ar~~P--~~K~~iv~~lq 716 (1034)
T 3ixz_A 654 IAARL--RVPVDQVNRKDARACVINGMQ----LKDMDPSELV----EALRTHPEMV-----FARTSP--QQKLVIVESCQ 716 (1034)
T ss_pred HHHhh--CccchhccccccceeEEecHh----hhhCCHHHHH----HHHHhCCceE-----EEecCH--HHHHHHHHHHH
Confidence 10000 0000000000 0111111110 0000112222 2222222111 223333 36888887765
Q ss_pred HhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC-C----cccccceEeC--ChhHHHHHHH
Q 045882 755 STMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG-Q----KPSKARYYLD--DEEDVLALLK 825 (832)
Q Consensus 755 ~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG-~----~~s~A~y~l~--~~~eV~~~L~ 825 (832)
+. | ..|+++||+.||.+||+.|+ ++|+|| + .+..|+|++. +.++++.+++
T Consensus 717 ~~----g---~~V~a~GDG~ND~~mLk~A~--------------vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 717 RL----G---AIVAVTGDGVNDSPALKKAD--------------IGVAMGIAGSDAAKNAADMILLDDNFASIVTGVE 773 (1034)
T ss_pred Hc----C---CEEEEECCcHHhHHHHHHCC--------------eeEEeCCccCHHHHHhcCEEeccCCchHHHHHHH
Confidence 43 3 45999999999999999998 577787 4 2678999984 5677777774
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.93 E-value=1.6e-05 Score=80.22 Aligned_cols=74 Identities=15% Similarity=0.078 Sum_probs=62.0
Q ss_pred EeCC--CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCccc---------
Q 045882 740 KPQG--VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPS--------- 808 (832)
Q Consensus 740 ~p~g--vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s--------- 808 (832)
.+.+ .+|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.+++...
T Consensus 137 ~~~~~~kpk~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-------------~i~~~~~~~~~~~~~~~l 200 (229)
T 2fdr_A 137 LGADRVKPKPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-------------VIGFTGASHTYPSHADRL 200 (229)
T ss_dssp HCTTCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-------------EEEECCSTTCCTTHHHHH
T ss_pred cccCCCCcCHHHHHHHHHHc---CCChhHeEEEcCCHHHHHHHHHCCCE-------------EEEEecCCccchhhhHHH
Confidence 3677 89999999999999 99999999999999999999999864 344544321
Q ss_pred ---ccceEeCChhHHHHHHHHhhh
Q 045882 809 ---KARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 809 ---~A~y~l~~~~eV~~~L~~l~~ 829 (832)
.|+|++++..++..+|+.+..
T Consensus 201 ~~~~ad~v~~~~~el~~~l~~~~~ 224 (229)
T 2fdr_A 201 TDAGAETVISRMQDLPAVIAAMAE 224 (229)
T ss_dssp HHHTCSEEESCGGGHHHHHHHHTC
T ss_pred hhcCCceeecCHHHHHHHHHHhhh
Confidence 289999999999999988743
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=5.1e-05 Score=83.81 Aligned_cols=154 Identities=14% Similarity=0.115 Sum_probs=96.9
Q ss_pred CCEEEEEeccccccCCH-HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCccc
Q 045882 333 GKKVIVGVDDMDIFKGI-SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEP 411 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi-~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~p 411 (832)
.+.++++.|++...|+. ..++.++.+. +++|+++ ++.++.+ .+.+.++ +.. ..
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l~--------------~~~--~~ 271 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALLT--------------DLP--DN 271 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGCT--------------TCC--TT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhcc--------------cCC--CC
Confidence 45688889999887666 8888888888 8888765 6655532 2211111 001 12
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEe----ccCcccccc
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVI----SEFIGCSPS 487 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~s~~ 487 (832)
|. +.+.++..++ +..||++|. .|-..+..|+++|+. |+|+ .+-.+.++.
T Consensus 272 v~-~~~~~~~~~l---l~~ad~~v~----~~G~~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 324 (391)
T 3tsa_A 272 AR-IAESVPLNLF---LRTCELVIC----AGGSGTAFTATRLGI-------------------PQLVLPQYFDQFDYARN 324 (391)
T ss_dssp EE-ECCSCCGGGT---GGGCSEEEE----CCCHHHHHHHHHTTC-------------------CEEECCCSTTHHHHHHH
T ss_pred EE-EeccCCHHHH---HhhCCEEEe----CCCHHHHHHHHHhCC-------------------CEEecCCcccHHHHHHH
Confidence 44 3456776654 499999994 344467899999955 4565 333334444
Q ss_pred C---CCceEeCC----CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHH
Q 045882 488 L---SGAIRVNP----WDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSF 540 (832)
Q Consensus 488 l---~~a~~VnP----~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~ 540 (832)
+ ..|++++| .|.++++++|.++|+.+.. ++...+...++.........++.+
T Consensus 325 ~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 325 LAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGF-AAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHH-HHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4 24788988 7899999999999986543 333333344455556555554433
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=4.5e-05 Score=90.28 Aligned_cols=148 Identities=10% Similarity=0.077 Sum_probs=102.7
Q ss_pred CCEEEEEeccccccCCHHH-HHHHHHHHHH--hCCCcc-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCC
Q 045882 333 GKKVIVGVDDMDIFKGISL-KLLAMEQLLK--VHPELQ-GKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG 408 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~ 408 (832)
+..+++.|.|+..-||..+ .+..++++++ .+|+.. ..+++|..|....+. .....+-+.+.++++-||..-.-.+
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~~ 603 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5789999999999999999 8999988865 466522 247777777554332 2223455668888888886432233
Q ss_pred cccEEEecCCCCHHHHHHHHHhcCcceeccc--ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccc
Q 045882 409 YEPVILIDRPVPLHEKTAYYALAECCIVNAV--RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSP 486 (832)
Q Consensus 409 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~ 486 (832)
.-.|+|+. ..+..--..+|.+||+++.||. .|.=|+.-+-||.- |.|-+|..-|+-.
T Consensus 604 ~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGanv 662 (796)
T 1l5w_A 604 KLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN--------------------GALTVGTLDGANV 662 (796)
T ss_dssp GEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT--------------------TCEEEECSCTTHH
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeeecCcCCeee
Confidence 33477765 4556666689999999999999 78888877777763 4556666666555
Q ss_pred cC------CCceEeCCCCHHHHH
Q 045882 487 SL------SGAIRVNPWDIDAVA 503 (832)
Q Consensus 487 ~l------~~a~~VnP~d~~~~A 503 (832)
++ .+++++-. +.+++.
T Consensus 663 Ei~e~vG~~NgF~FG~-~~~ev~ 684 (796)
T 1l5w_A 663 EIAEKVGEENIFIFGH-TVEQVK 684 (796)
T ss_dssp HHHHHHCGGGSEECSC-CHHHHH
T ss_pred ehhhccCCCcEEEecC-CHHHHH
Confidence 44 24788866 667665
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.76 E-value=2.3e-05 Score=92.79 Aligned_cols=149 Identities=9% Similarity=0.089 Sum_probs=102.7
Q ss_pred CCEEEEEeccccccCCHHH-HHHHHHHHHH--hCCCcc-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCC
Q 045882 333 GKKVIVGVDDMDIFKGISL-KLLAMEQLLK--VHPELQ-GKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG 408 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~ 408 (832)
+..+++.|.|+..-||..+ .+..++++++ ++|+.. ..+++|..|....+. .....+-+.+.++++-||..-.-.+
T Consensus 515 d~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 515 ESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp TSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred CCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 6789999999999999999 8999998875 666532 247777777554332 2223455668888888887433334
Q ss_pred cccEEEecCCCCHHHHHHHHHhcCcceeccc--ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccc
Q 045882 409 YEPVILIDRPVPLHEKTAYYALAECCIVNAV--RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSP 486 (832)
Q Consensus 409 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~ 486 (832)
.-.|+|+. ..+..--..+|.+||+++.||. .|.=|+.-+-||.- |.|-+|..-|+-.
T Consensus 594 ~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGanv 652 (796)
T 2c4m_A 594 LLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN--------------------GALTLGTMDGANV 652 (796)
T ss_dssp TEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT--------------------TCEEEEESSTHHH
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeEEeccCCeEe
Confidence 44577776 3556666689999999999998 78877777776663 4555566666554
Q ss_pred cC------CCceEeCC--CCHHHHH
Q 045882 487 SL------SGAIRVNP--WDIDAVA 503 (832)
Q Consensus 487 ~l------~~a~~VnP--~d~~~~A 503 (832)
++ .+++++-. .+++++-
T Consensus 653 Ei~e~vG~~NgF~FG~~~~ev~~l~ 677 (796)
T 2c4m_A 653 EIVDSVGEENAYIFGARVEELPALR 677 (796)
T ss_dssp HHHHHHCGGGSEEESCCTTTHHHHH
T ss_pred ehhhhcCCCcEEEecCchhhHHHHH
Confidence 44 24677765 5554443
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=9.8e-05 Score=81.87 Aligned_cols=99 Identities=12% Similarity=-0.025 Sum_probs=59.9
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEe----ccCcccccc
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVI----SEFIGCSPS 487 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~s~~ 487 (832)
|.+ .+.++ ...++..||++|. .|-+.+..|||+|+. |+|+ .+-.+.++.
T Consensus 286 v~~-~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 338 (398)
T 4fzr_A 286 VLA-AGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEGV-------------------PQVSVPVIAEVWDSARL 338 (398)
T ss_dssp EEE-ESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTTC-------------------CEEECCCSGGGHHHHHH
T ss_pred EEE-eCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhCC-------------------CEEecCCchhHHHHHHH
Confidence 444 45665 4567778999994 444667899999955 4666 444455555
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 488 L---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 488 l---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
+ ..|+++++. |.++++++|.++|+.+. .++...+..+++.........++
T Consensus 339 ~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 339 LHAAGAGVEVPWEQAGVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp HHHTTSEEECC-------CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred HHHcCCEEecCcccCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 5 247888877 78899999999998653 33333333444555555444433
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.72 E-value=8.8e-06 Score=79.83 Aligned_cols=41 Identities=10% Similarity=-0.095 Sum_probs=36.6
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+.+..|+.+++.+++++ |++ ++++|||+.||++|++.+|..
T Consensus 134 ~~~kp~~~~~~~~~~~~---~~~--~~~~iGD~~~Di~~a~~aG~~ 174 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKY---QIS--SGLVIGDRPIDIEAGQAAGLD 174 (190)
T ss_dssp CCCTTSCHHHHHHHHHT---TCS--SEEEEESSHHHHHHHHHTTCE
T ss_pred CCCCCCHHHHHHHHHHc---CCC--eEEEEcCCHHHHHHHHHcCCe
Confidence 45667899999999999 887 999999999999999999863
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.67 E-value=3.9e-05 Score=91.12 Aligned_cols=150 Identities=14% Similarity=0.055 Sum_probs=102.0
Q ss_pred CCEEEEEeccccccCCHHHH-HHHHHHHH--HhCCCccC-cEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCC
Q 045882 333 GKKVIVGVDDMDIFKGISLK-LLAMEQLL--KVHPELQG-KLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG 408 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~-l~A~~~ll--~~~P~~~~-~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~ 408 (832)
+..+++.|.|+..-||..+. |..+++++ .++|+..- .+++|..|....+. .....+-+.+.++++.+|..-...+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~~ 627 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccCC
Confidence 57899999999999999998 88888886 36765431 45677776554332 2223455667888888876533334
Q ss_pred cccEEEecCCCCHHHHHHHHHhcCcceeccc--ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccc
Q 045882 409 YEPVILIDRPVPLHEKTAYYALAECCIVNAV--RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSP 486 (832)
Q Consensus 409 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~ 486 (832)
.-.|+|+. ..+..--..+|.+||+++.||. .|.=|+.-+-||.- |.|-+|..-|+-.
T Consensus 628 ~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN--------------------GaLtigtlDGanv 686 (824)
T 2gj4_A 628 RLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN--------------------GALTIGTMDGANV 686 (824)
T ss_dssp GEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT--------------------TCEEEECSCTTHH
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CceEEEEecCccc
Confidence 33577776 3556556689999999999999 78888777777763 4556665555442
Q ss_pred cC------CCceEeCCCCHHHHHHHH
Q 045882 487 SL------SGAIRVNPWDIDAVADAL 506 (832)
Q Consensus 487 ~l------~~a~~VnP~d~~~~A~ai 506 (832)
++ .+++++... .+++ +++
T Consensus 687 Ei~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 687 EMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp HHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred hhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 32 247888665 6666 444
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00015 Score=84.09 Aligned_cols=153 Identities=7% Similarity=-0.117 Sum_probs=96.0
Q ss_pred CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE-EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 334 KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ-IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 334 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq-i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
..++.+..|+ .|..+..++++.+++++.|+.+ .++. ++. +.+... .+.+++.+ ..|. ..|
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~---L~l~~~g~---~~g~~~-~~~~~~~~--~GI~--------~Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKV---HFHFALGQ---SNGITH-PYVERFIK--SYLG--------DSA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEE---EEEEEESS---CCGGGH-HHHHHHHH--HHHG--------GGE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcE---EEEEecCC---CchhhH-HHHHHHHH--cCCC--------ccE
Confidence 5677777875 6999999999999999999742 2222 331 122322 22222221 1221 125
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS--- 489 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--- 489 (832)
+ +.+.++.++..++|+.||+|+.|+.+.| |+++.|||+|+. |+|.....+.+.-+.
T Consensus 502 ~-F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGV-------------------PVVTl~G~~~asRvgaSl 560 (631)
T 3q3e_A 502 T-AHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGL-------------------VGVCKTGAEVHEHIDEGL 560 (631)
T ss_dssp E-EECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTC-------------------CEEEECCSSHHHHHHHHH
T ss_pred E-EcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCC-------------------CEEeccCCcHHHHhHHHH
Confidence 4 4568999999999999999999998876 999999999943 455533222211111
Q ss_pred ------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh
Q 045882 490 ------GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI 528 (832)
Q Consensus 490 ------~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v 528 (832)
..++| ..|.++.++...+..+.+ +.++...+++++.+
T Consensus 561 L~~~GLpE~LI-A~d~eeYv~~Av~La~D~-~~l~~LR~~Lr~~~ 603 (631)
T 3q3e_A 561 FKRLGLPEWLI-ANTVDEYVERAVRLAENH-QERLELRRYIIENN 603 (631)
T ss_dssp HHHTTCCGGGE-ESSHHHHHHHHHHHHHCH-HHHHHHHHHHHHSC
T ss_pred HHhcCCCccee-cCCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHh
Confidence 12223 247889988887777744 44444445555443
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.64 E-value=8e-05 Score=76.41 Aligned_cols=74 Identities=11% Similarity=-0.020 Sum_probs=60.4
Q ss_pred EEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEE----eCC-------c
Q 045882 738 EVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACT----VGQ-------K 806 (832)
Q Consensus 738 EV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~----vG~-------~ 806 (832)
|..+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+. .|. .
T Consensus 167 ~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~g~~~~~~l~~ 232 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLL---DLPPQEVMLCAAHNYDLKAARALGLK-----------TAFIARPLEYGPGQSQDLAA 232 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCE-----------EEEECCTTTTCTTCCSSSSC
T ss_pred cccccCCCCHHHHHHHHHHc---CCChHHEEEEcCchHhHHHHHHCCCe-----------EEEEecCCccCCCCCccccc
Confidence 45578889999999999999 99999999999999999999999974 11121 121 1
Q ss_pred ccccceEeCChhHHHHHHH
Q 045882 807 PSKARYYLDDEEDVLALLK 825 (832)
Q Consensus 807 ~s~A~y~l~~~~eV~~~L~ 825 (832)
+..|+|++++..++..+|.
T Consensus 233 ~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 233 EQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp SSCCSEEESSHHHHHHHHH
T ss_pred CCCCcEEECCHHHHHHHhc
Confidence 4578999999999998885
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0015 Score=71.52 Aligned_cols=53 Identities=19% Similarity=0.279 Sum_probs=40.4
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCC---hhhHHHHh
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRG---KVSLGEWL 634 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~ 634 (832)
++++.++||+||||+. .. .+-+.+.++|+.| ++.|..++++|+.+ .....+.+
T Consensus 11 ~~~~~~l~D~DGvl~~---g~-~~~p~a~~~l~~l-~~~g~~~~~vTNn~~~~~~~~~~~l 66 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFR---GK-KPIAGASDALKLL-NRNKIPYILLTNGGGFSERARTEFI 66 (352)
T ss_dssp -CCEEEEECCBTTTEE---TT-EECTTHHHHHHHH-HHTTCCEEEECSCCSSCHHHHHHHH
T ss_pred ccCCEEEEECCCeeEc---CC-eeCcCHHHHHHHH-HHCCCEEEEEeCCCCCCchHHHHHH
Confidence 3789999999999997 33 3456888899999 67899999999654 44444444
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00021 Score=79.34 Aligned_cols=156 Identities=11% Similarity=0.018 Sum_probs=96.0
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
.+.+++++|++. .|+...+..+++.+ ++. +++ ++.++.+. .+.++++ + .. ..|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~-~~~----~~~~~g~~----~~~~~l~----~----------~~--~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGL-AGL-DAD----VLVASGPS----LDVSGLG----E----------VP--ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHH-HTS-SSE----EEEECCSS----CCCTTCC----C----------CC--TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHH-HcC-CCE----EEEEECCC----CChhhhc----c----------CC--CcE
Confidence 457889999996 66666666666555 333 222 44444322 1001111 0 00 124
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCc----cccccC
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFI----GCSPSL 488 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~----G~s~~l 488 (832)
.+ .+.+ ++..+|+.||+||.+| | ..+.+|||+|+. |+|+.... +.++.+
T Consensus 295 ~~-~~~~---~~~~~l~~ad~~v~~~---g-~~t~~Ea~a~G~-------------------P~v~~p~~~~q~~~~~~v 347 (412)
T 3otg_A 295 RL-ESWV---PQAALLPHVDLVVHHG---G-SGTTLGALGAGV-------------------PQLSFPWAGDSFANAQAV 347 (412)
T ss_dssp EE-ESCC---CHHHHGGGCSEEEESC---C-HHHHHHHHHHTC-------------------CEEECCCSTTHHHHHHHH
T ss_pred EE-eCCC---CHHHHHhcCcEEEECC---c-hHHHHHHHHhCC-------------------CEEecCCchhHHHHHHHH
Confidence 44 4555 3778999999999765 2 258899999954 57774443 355555
Q ss_pred ---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHH
Q 045882 489 ---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQD 543 (832)
Q Consensus 489 ---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 543 (832)
..|++++|. |.++++++|.++|+.+ +.++...+..+++...+....-++.+.+-
T Consensus 348 ~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 406 (412)
T 3otg_A 348 AQAGAGDHLLPDNISPDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGF 406 (412)
T ss_dssp HHHTSEEECCGGGCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHH
T ss_pred HHcCCEEecCcccCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 348889887 8999999999999853 44444445556666667666666554443
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00023 Score=72.66 Aligned_cols=76 Identities=13% Similarity=0.059 Sum_probs=60.4
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEE----eCC-------cc
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACT----VGQ-------KP 807 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~----vG~-------~~ 807 (832)
..+.+..|+.+++.+++++ |++++++++|||+.||+.|.+.+|.. ++.+. .|. ..
T Consensus 164 ~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~g~~~~~~~~~~ 229 (254)
T 3umg_A 164 INRKYKPDPQAYLRTAQVL---GLHPGEVMLAAAHNGDLEAAHATGLA-----------TAFILRPVEHGPHQTDDLAPT 229 (254)
T ss_dssp HHTCCTTSHHHHHHHHHHT---TCCGGGEEEEESCHHHHHHHHHTTCE-----------EEEECCTTTTCTTCCSCSSCS
T ss_pred cCCCCCCCHHHHHHHHHHc---CCChHHEEEEeCChHhHHHHHHCCCE-----------EEEEecCCcCCCCcccccccc
Confidence 3455677899999999999 99999999999999999999999974 12222 121 24
Q ss_pred cccceEeCChhHHHHHHHHhh
Q 045882 808 SKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 808 s~A~y~l~~~~eV~~~L~~l~ 828 (832)
..|+|++++..++..+|....
T Consensus 230 ~~~d~~~~~~~el~~~l~~~~ 250 (254)
T 3umg_A 230 GSWDISATDITDLAAQLRAGS 250 (254)
T ss_dssp SCCSEEESSHHHHHHHHHHCC
T ss_pred CCCceEECCHHHHHHHhcCCC
Confidence 678899999999999987643
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00021 Score=89.12 Aligned_cols=163 Identities=15% Similarity=0.192 Sum_probs=92.5
Q ss_pred CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHH
Q 045882 598 KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVM 677 (832)
Q Consensus 598 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~ 677 (832)
.+|.+++.++|++| ++.|+.|+++|||....+.....+++ +..+||..+. ++.
T Consensus 598 Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~ia~~lg---i~~~~~~~i~-----------------------~~~ 650 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKGVG---IISEGNETIE-----------------------DIA 650 (1028)
T ss_dssp CCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHT---SSCTTCCCHH-----------------------HHH
T ss_pred CCCChhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHHHHcC---CCCCCchhHH-----------------------HHH
Confidence 45778999999999 78899999999999999988877653 3333332110 000
Q ss_pred HHHHhcCCceEEe-ecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHh
Q 045882 678 KLYTEATDGSYIE-KKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLST 756 (832)
Q Consensus 678 ~~~~e~~~gs~ie-~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 756 (832)
+.. ..+-.... .........-...+ .. ...++.+ .+......+ +..+.| -+|...++.+.+.
T Consensus 651 ~~~--~~~~~~~~~~~~~~~vi~G~~l~-~~---~~~~l~~----~~~~~~~~v-----~ar~~P--~~K~~iV~~lq~~ 713 (1028)
T 2zxe_A 651 ARL--NIPIGQVNPRDAKACVVHGSDLK-DL---STEVLDD----ILHYHTEIV-----FARTSP--QQKLIIVEGCQRQ 713 (1028)
T ss_dssp HHT--TCCGGGSCGGGCCEEEEEHHHHT-TC---CHHHHHH----HHHHCSEEE-----EESCCH--HHHHHHHHHHHHT
T ss_pred hhc--CcchhhccccccceEEEEcHHhh-hC---CHHHHHH----HHhhCCcEE-----EEEcCH--HHHHHHHHHHHhC
Confidence 000 00000000 00011111111111 01 1122222 222222111 112233 3799999988663
Q ss_pred hhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC-Cc----ccccceEeC--ChhHHHHHHH
Q 045882 757 MISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG-QK----PSKARYYLD--DEEDVLALLK 825 (832)
Q Consensus 757 l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG-~~----~s~A~y~l~--~~~eV~~~L~ 825 (832)
| ..|+++||+.||.+||+.|+ ++|+|| +. +..|++++. +.+.+.++++
T Consensus 714 ----g---~~V~~iGDG~ND~paLk~Ad--------------vGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 714 ----G---AIVAVTGDGVNDSPALKKAD--------------IGVAMGISGSDVSKQAADMILLDDNFASIVTGVE 768 (1028)
T ss_dssp ----T---CCEEEEECSGGGHHHHHHSS--------------EEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHH
T ss_pred ----C---CEEEEEcCCcchHHHHHhCC--------------ceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHH
Confidence 3 56999999999999999998 577888 33 467899884 4666777665
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.31 E-value=6e-05 Score=79.04 Aligned_cols=59 Identities=20% Similarity=0.180 Sum_probs=45.2
Q ss_pred ccCcEEEEEecCCCcCCCCC----------------------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCCh---hhH
Q 045882 576 RTSRRAIFLDYDGTVVPHHA----------------------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGK---VSL 630 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l 630 (832)
..++++|+||+||||++..+ ....+.+.+.++|+.| ++.|+.++|+|||+. ..+
T Consensus 56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~Gi~i~iaTnr~~~~~~~~ 134 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYT-ESKGVDIYYISNRKTNQLDAT 134 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHH-HHTTCEEEEEEEEEGGGHHHH
T ss_pred CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCEEEEEcCCchhHHHHH
Confidence 45679999999999998310 0145778999999999 688999999999994 444
Q ss_pred HHHhc
Q 045882 631 GEWLA 635 (832)
Q Consensus 631 ~~~~~ 635 (832)
...+.
T Consensus 135 ~~~L~ 139 (258)
T 2i33_A 135 IKNLE 139 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45554
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00046 Score=77.18 Aligned_cols=102 Identities=11% Similarity=-0.063 Sum_probs=65.6
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc----cccc
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG----CSPS 487 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~s~~ 487 (832)
|.+ .+.+++. .+|+.||++|..+ |. .+.+|||+|+. |+|+....| .++.
T Consensus 285 v~~-~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G~-------------------P~i~~p~~~~q~~~a~~ 337 (430)
T 2iyf_A 285 VEV-HDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATAT-------------------PMIAVPQAVDQFGNADM 337 (430)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTTC-------------------CEEECCCSHHHHHHHHH
T ss_pred eEE-EecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhCC-------------------CEEECCCccchHHHHHH
Confidence 444 4567765 6899999988754 43 67899999954 577776654 2333
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHH
Q 045882 488 L---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541 (832)
Q Consensus 488 l---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 541 (832)
+ ..|+.+++. |.++++++|.++|+. ++.++...+..++....+.....++.+.
T Consensus 338 ~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 338 LQGLGVARKLATEEATADLLRETALALVDD-PEVARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp HHHTTSEEECCCC-CCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHcCCEEEcCCCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3 347888877 889999999999974 3333333333344444444444444443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00097 Score=83.04 Aligned_cols=142 Identities=15% Similarity=0.230 Sum_probs=89.1
Q ss_pred CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHH
Q 045882 598 KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVM 677 (832)
Q Consensus 598 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~ 677 (832)
.++.+++.++|++| ++.|+.++++||+..........+++ +...+.. + .+.
T Consensus 602 D~lr~~~~~~I~~l-~~~Gi~v~miTGD~~~ta~~ia~~lg---i~~~~~~-i---~~~--------------------- 652 (995)
T 3ar4_A 602 DPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICRRIG---IFGENEE-V---ADR--------------------- 652 (995)
T ss_dssp CCBCTTHHHHHHHH-HHTTCEEEEEESSCHHHHHHHHHHHT---SSCTTCC-C---TTT---------------------
T ss_pred CCCchhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHHHHcC---cCCCCCc-c---cce---------------------
Confidence 35667899999998 78899999999999999888776543 1111100 0 000
Q ss_pred HHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhh
Q 045882 678 KLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTM 757 (832)
Q Consensus 678 ~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l 757 (832)
.+..++ +...+ ..++.+.+. +. .-+.++.|. +|+.+++.+.+.
T Consensus 653 ----------~~~g~~------~~~l~-------~~~~~~~~~----~~-------~v~~r~~P~--~K~~~v~~l~~~- 695 (995)
T 3ar4_A 653 ----------AYTGRE------FDDLP-------LAEQREACR----RA-------CCFARVEPS--HKSKIVEYLQSY- 695 (995)
T ss_dssp ----------EEEHHH------HHTSC-------HHHHHHHHH----HC-------CEEESCCSS--HHHHHHHHHHTT-
T ss_pred ----------EEEchh------hhhCC-------HHHHHHHHh----hC-------cEEEEeCHH--HHHHHHHHHHHC-
Confidence 000000 00000 012222221 11 123445555 899999998653
Q ss_pred hhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHHH
Q 045882 758 ISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 758 ~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L~ 825 (832)
| +.|+++||+.||.+||+.|+ +++++|+. +..|++++ ++...+.++++
T Consensus 696 ---g---~~v~~~GDG~ND~~alk~Ad--------------vgiamg~g~~~ak~aAd~vl~~~~~~~i~~~i~ 749 (995)
T 3ar4_A 696 ---D---EITAMTGDGVNDAPALKKAE--------------IGIAMGSGTAVAKTASEMVLADDNFSTIVAAVE 749 (995)
T ss_dssp ---T---CCEEEEECSGGGHHHHHHST--------------EEEEETTSCHHHHHTCSEEETTCCHHHHHHHHH
T ss_pred ---C---CEEEEEcCCchhHHHHHHCC--------------eEEEeCCCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 3 67999999999999999998 57778753 45788988 45677776664
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00073 Score=69.13 Aligned_cols=72 Identities=14% Similarity=0.126 Sum_probs=58.8
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceE
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYY 813 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~ 813 (832)
.+.+..|..++..+++++ |++++++++|||+.||+.|.+.+|.. +++|+.|.. ...|.|+
T Consensus 161 ~~~~Kp~p~~~~~~~~~l---~~~~~~~~~vGDs~~Di~~a~~aG~~-----------~v~v~~~~~~~~~~~~~~a~~~ 226 (240)
T 2hi0_A 161 GIRRKPAPDMTSECVKVL---GVPRDKCVYIGDSEIDIQTARNSEMD-----------EIAVNWGFRSVPFLQKHGATVI 226 (240)
T ss_dssp TSCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCCCE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEECCCCCchhHHHhcCCCEE
Confidence 356778999999999999 99999999999999999999999863 245555542 1358899
Q ss_pred eCChhHHHHHHH
Q 045882 814 LDDEEDVLALLK 825 (832)
Q Consensus 814 l~~~~eV~~~L~ 825 (832)
+++..++..+|.
T Consensus 227 ~~~~~el~~~l~ 238 (240)
T 2hi0_A 227 VDTAEKLEEAIL 238 (240)
T ss_dssp ECSHHHHHHHHH
T ss_pred ECCHHHHHHHhc
Confidence 999999887764
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.007 Score=66.38 Aligned_cols=89 Identities=13% Similarity=0.108 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccc--------ccC---CC
Q 045882 422 HEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCS--------PSL---SG 490 (832)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s--------~~l---~~ 490 (832)
+++..+|+.||++|..| | +.+..|+++|+. |.|+.-+.+.. +.+ ..
T Consensus 244 ~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G~-------------------P~Ilip~p~~~~~~Q~~NA~~l~~~G~ 300 (365)
T 3s2u_A 244 SDMAAAYAWADLVICRA---G-ALTVSELTAAGL-------------------PAFLVPLPHAIDDHQTRNAEFLVRSGA 300 (365)
T ss_dssp SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTC-------------------CEEECC-----CCHHHHHHHHHHTTTS
T ss_pred hhhhhhhccceEEEecC---C-cchHHHHHHhCC-------------------CeEEeccCCCCCcHHHHHHHHHHHCCC
Confidence 47899999999988543 5 567789999955 45555444332 223 23
Q ss_pred ceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHH
Q 045882 491 AIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAY 535 (832)
Q Consensus 491 a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (832)
|++++.. +.++++++|.++|+.++ .++.+.++.++. ...+...
T Consensus 301 a~~l~~~~~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~-~~~~aa~ 345 (365)
T 3s2u_A 301 GRLLPQKSTGAAELAAQLSEVLMHPE-TLRSMADQARSL-AKPEATR 345 (365)
T ss_dssp EEECCTTTCCHHHHHHHHHHHHHCTH-HHHHHHHHHHHT-CCTTHHH
T ss_pred EEEeecCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHhc-CCccHHH
Confidence 6777655 47899999999998653 333334444444 3334433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=9.8e-05 Score=77.52 Aligned_cols=55 Identities=16% Similarity=0.205 Sum_probs=39.1
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
++..+++.+...-.....+-+.+.++|+.| ++.|+.++++||.+...+...+..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L-~~~g~~~~i~T~~~~~~~~~~~~~~ 173 (263)
T 2yj3_A 119 IAVYINGEPIASFNISDVPRPNLKDYLEKL-KNEGLKIIILSGDKEDKVKELSKEL 173 (263)
Confidence 555566665532112345668889999999 6789999999999888877666543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00086 Score=67.65 Aligned_cols=72 Identities=17% Similarity=0.139 Sum_probs=57.5
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCC---cccccceEeCC
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQ---KPSKARYYLDD 816 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~---~~s~A~y~l~~ 816 (832)
+.+..|+.+++.+++.+ |++++++++|||+. ||+.|.+.+|.. ++.+.-|. .+..|+|++++
T Consensus 159 ~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~d~vi~s 224 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSAT---QSELRESLMIGDSWEADITGAHGVGMH-----------QAFYNVTERTVFPFQPTYHIHS 224 (240)
T ss_dssp TCCTTSHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCCCSSCCSEEESS
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHcCCe-----------EEEEcCCCCCCcCCCCceEECC
Confidence 45678899999999999 99999999999995 999999999974 12222222 24679999999
Q ss_pred hhHHHHHHHH
Q 045882 817 EEDVLALLKG 826 (832)
Q Consensus 817 ~~eV~~~L~~ 826 (832)
..|+..+++.
T Consensus 225 l~e~~~~~~~ 234 (240)
T 3qnm_A 225 LKELMNLLEG 234 (240)
T ss_dssp THHHHHHTC-
T ss_pred HHHHHHHHhc
Confidence 9999888754
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00064 Score=83.24 Aligned_cols=166 Identities=15% Similarity=0.091 Sum_probs=101.9
Q ss_pred HHhhccCcEEEEEecCC-----CcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeC
Q 045882 572 DAYKRTSRRAIFLDYDG-----TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEH 646 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DG-----TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaen 646 (832)
..|.+...|.+++=++. +++.--....+|-+++.+++++| ++.|+.|+++||...........+++-..-+
T Consensus 503 ~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l-~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~--- 578 (920)
T 1mhs_A 503 AEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEA-KTLGLSIKMLTGDAVGIARETSRQLGLGTNI--- 578 (920)
T ss_dssp HHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHH-HHHTCEEEEEESSCHHHHHHHHHHHTSSCSC---
T ss_pred HHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHH-hhcCceEEEEcCCCHHHHHHHHHHcCCCccc---
Confidence 34445555666665542 55543224567889999999998 7889999999999999888877765311100
Q ss_pred CEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC
Q 045882 647 GYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE 726 (832)
Q Consensus 647 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~ 726 (832)
...+.. . ..|. . ...+. ++ .+.+.+.
T Consensus 579 ----~~~~~~----~----------------------~~g~---~---------~~~~~--------el----~~~~~~~ 604 (920)
T 1mhs_A 579 ----YNAERL----G----------------------LGGG---G---------DMPGS--------EV----YDFVEAA 604 (920)
T ss_dssp ----CCSSSS----S----------------------SCBC---C---------CGGGG--------GG----GTTTTTT
T ss_pred ----cCccce----e----------------------ecCc---c---------cCCHH--------HH----HHHHhhC
Confidence 000000 0 0010 0 00000 11 1112121
Q ss_pred CEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc
Q 045882 727 PVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK 806 (832)
Q Consensus 727 ~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~ 806 (832)
.-+.++.|. +|...++.+.+. | ..|+++||+.||.+||+.|+ ++++||+.
T Consensus 605 -------~V~arv~P~--~K~~iV~~Lq~~----g---~~Vam~GDGvNDapaLk~Ad--------------vGIAmg~g 654 (920)
T 1mhs_A 605 -------DGFAEVFPQ--HKYNVVEILQQR----G---YLVAMTGDGVNDAPSLKKAD--------------TGIAVEGS 654 (920)
T ss_dssp -------SCEESCCST--HHHHHHHHHHTT----T---CCCEECCCCGGGHHHHHHSS--------------EEEEETTS
T ss_pred -------eEEEEeCHH--HHHHHHHHHHhC----C---CeEEEEcCCcccHHHHHhCC--------------cCcccccc
Confidence 124455565 899999998653 4 57999999999999999998 57788863
Q ss_pred ----ccccceEeC--ChhHHHHHHH
Q 045882 807 ----PSKARYYLD--DEEDVLALLK 825 (832)
Q Consensus 807 ----~s~A~y~l~--~~~eV~~~L~ 825 (832)
+..|++++. +...+.+.++
T Consensus 655 td~ak~aADiVl~~~~~~~I~~ai~ 679 (920)
T 1mhs_A 655 SDAARSAADIVFLAPGLGAIIDALK 679 (920)
T ss_dssp CHHHHHSSSEEESSCCSHHHHHHHH
T ss_pred cHHHHHhcCeEEcCCCHHHHHHHHH
Confidence 467888873 4555555543
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00026 Score=72.70 Aligned_cols=73 Identities=16% Similarity=0.157 Sum_probs=59.2
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCc--ceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLP--DFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~--d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l 814 (832)
..+..|..+++.+++.+ |+++ +++++|||+.||+.|.+.+|.. ++.|..|+. +..|+|++
T Consensus 168 ~~~Kp~~~~~~~~~~~l---gi~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~ad~v~ 233 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRF---SPPPAMEKCLVFEDAPNGVEAALAAGMQ-----------VVMVPDGNLSRDLTTKATLVL 233 (250)
T ss_dssp CSCTTSTHHHHHHHHTS---SSCCCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTSCGGGSTTSSEEC
T ss_pred cCCCCChHHHHHHHHHc---CCCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCchhhcccccEee
Confidence 45667788999999999 9988 9999999999999999999963 245555552 47899999
Q ss_pred CChhHHHHHHHHh
Q 045882 815 DDEEDVLALLKGL 827 (832)
Q Consensus 815 ~~~~eV~~~L~~l 827 (832)
++..|+...|..|
T Consensus 234 ~sl~el~~~l~~l 246 (250)
T 3l5k_A 234 NSLQDFQPELFGL 246 (250)
T ss_dssp SCGGGCCGGGGTC
T ss_pred cCHHHhhHHHhcC
Confidence 9999987766554
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00058 Score=67.86 Aligned_cols=68 Identities=22% Similarity=0.224 Sum_probs=53.1
Q ss_pred CCCH--HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC
Q 045882 743 GVTK--GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD 816 (832)
Q Consensus 743 gvnK--G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~ 816 (832)
+.+| +.+++.+++.+ |++++++++|||+.||+.|++.+|.. ++.+..|.. -..|.|++++
T Consensus 135 ~~~KP~~~~~~~~~~~~---~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~a~~~~~~ 200 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQK 200 (209)
T ss_dssp SCCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESS
T ss_pred CCCCCCcHHHHHHHHHc---CCCcccEEEECCChhhHHHHHHcCCe-----------EEEEcCCCCChhhhccCCEEeCC
Confidence 6788 99999999999 99999999999999999999999864 122222321 1128899999
Q ss_pred hhHHHHHH
Q 045882 817 EEDVLALL 824 (832)
Q Consensus 817 ~~eV~~~L 824 (832)
..++.++|
T Consensus 201 ~~el~~~l 208 (209)
T 2hdo_A 201 PLDILELF 208 (209)
T ss_dssp GGGGGGGC
T ss_pred HHHHHHhh
Confidence 88887654
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0045 Score=67.85 Aligned_cols=139 Identities=12% Similarity=0.035 Sum_probs=85.1
Q ss_pred CCEEEEEecccccc-------CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC
Q 045882 333 GKKVIVGVDDMDIF-------KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG 405 (832)
Q Consensus 333 ~~~vil~VdRld~~-------KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~ 405 (832)
...+++++|++... +.+...++|++++ +++ ++.++. +++.+ ++.. + .
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~g-----~~~~~----~l~~----~----~ 263 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAAP-----DTVAE----ALRA----E----V 263 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEECC-----HHHHH----HHHH----H----C
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEeC-----CCCHH----hhCC----C----C
Confidence 35689999999875 5677777777542 232 444431 12222 2211 1 1
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc--
Q 045882 406 VPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG-- 483 (832)
Q Consensus 406 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G-- 483 (832)
..|.+ +.+++. .+|..||+||..+ | ..+..|+|+|+. |+|+..+.+
T Consensus 264 ----~~v~~--~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G~-------------------P~v~~p~~~dq 311 (384)
T 2p6p_A 264 ----PQARV--GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAGV-------------------PQLLIPKGSVL 311 (384)
T ss_dssp ----TTSEE--ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTTC-------------------CEEECCCSHHH
T ss_pred ----CceEE--cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhCC-------------------CEEEccCcccc
Confidence 01433 667754 4679999999753 3 457899999954 567665543
Q ss_pred --ccccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcC
Q 045882 484 --CSPSL---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 484 --~s~~l---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (832)
.++.+ ..|+.+++. +.++++++|.++|+.+ +.++++.+..+.+...
T Consensus 312 ~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~ 364 (384)
T 2p6p_A 312 EAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKD--TYARRAQDLSREISGM 364 (384)
T ss_dssp HHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhC
Confidence 33333 347888775 7899999999999743 3344455554444443
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.002 Score=64.97 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc---cccceEeCChhH
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKP---SKARYYLDDEED 819 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~---s~A~y~l~~~~e 819 (832)
+-.|..+++.+++.+ |++++++++|||+.||+.|.+.+|.. +++|..|..+ ..|.|++++..+
T Consensus 138 ~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~e 203 (222)
T 2nyv_A 138 KKPSPTPVLKTLEIL---GEEPEKALIVGDTDADIEAGKRAGTK-----------TALALWGYVKLNSQIPDFTLSRPSD 203 (222)
T ss_dssp TCCTTHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEETTSSCSCCCCCCSEEESSTTH
T ss_pred CCCChHHHHHHHHHh---CCCchhEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCccccCCCEEECCHHH
Confidence 347899999999999 99999999999999999999999863 1334444321 568899999999
Q ss_pred HHHHHHHhh
Q 045882 820 VLALLKGLA 828 (832)
Q Consensus 820 V~~~L~~l~ 828 (832)
+..+|..+.
T Consensus 204 l~~~l~~~~ 212 (222)
T 2nyv_A 204 LVKLMDNHI 212 (222)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHhh
Confidence 998887653
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0016 Score=62.84 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=79.5
Q ss_pred CCEEEEEecccc---ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCc
Q 045882 333 GKKVIVGVDDMD---IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGY 409 (832)
Q Consensus 333 ~~~vil~VdRld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~ 409 (832)
...+++++|++. +.|++...++|++++ + ++ ++.++.+.. .+ ...
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~~~~~g~~~---~~-----------------~~~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-QK----VLWRFDGNK---PD-----------------TLG---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-SE----EEEECCSSC---CT-----------------TCC----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-Ce----EEEEECCcC---cc-----------------cCC----
Confidence 467999999995 677888888877532 2 22 444443221 00 011
Q ss_pred ccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc----cc
Q 045882 410 EPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG----CS 485 (832)
Q Consensus 410 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~s 485 (832)
..|. +.+.+++.++.++ ..||++|.. -| +.+..|+++|+. |+|+..+.+ .+
T Consensus 68 ~~v~-~~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G~-------------------P~i~~p~~~~Q~~na 122 (170)
T 2o6l_A 68 LNTR-LYKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHGI-------------------PMVGIPLFADQPDNI 122 (170)
T ss_dssp TTEE-EESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHTC-------------------CEEECCCSTTHHHHH
T ss_pred CcEE-EecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcCC-------------------CEEeccchhhHHHHH
Confidence 1244 4568888776654 999999963 34 488999999955 566665532 23
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhcC
Q 045882 486 PSL---SGAIRVNPW--DIDAVADALHDAITM 512 (832)
Q Consensus 486 ~~l---~~a~~VnP~--d~~~~A~ai~~aL~m 512 (832)
+.+ ..|+.+++. +.++++++|.++++.
T Consensus 123 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 123 AHMKARGAAVRVDFNTMSSTDLLNALKRVIND 154 (170)
T ss_dssp HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHcCCeEEeccccCCHHHHHHHHHHHHcC
Confidence 333 237888876 889999999999974
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0029 Score=64.41 Aligned_cols=74 Identities=22% Similarity=0.203 Sum_probs=59.2
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----c---cccce
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQK----P---SKARY 812 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~---s~A~y 812 (832)
+.+..|..+++.+++.+ |++++++++|||+. ||+.|.+.+|.. ++.|..|.. . ..|.|
T Consensus 147 ~~~Kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~~Di~~a~~aG~~-----------~~~v~~g~~~~~~~~~~~~~~~ 212 (241)
T 2hoq_A 147 GVKKPHPKIFKKALKAF---NVKPEEALMVGDRLYSDIYGAKRVGMK-----------TVWFRYGKHSERELEYRKYADY 212 (241)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCHHHHTTGGGCSE
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHCCCE-----------EEEECCCCCCcccccccCCCCE
Confidence 44566778999999999 99999999999998 999999999874 234444532 1 26889
Q ss_pred EeCChhHHHHHHHHhh
Q 045882 813 YLDDEEDVLALLKGLA 828 (832)
Q Consensus 813 ~l~~~~eV~~~L~~l~ 828 (832)
.+++..++..+|+.+.
T Consensus 213 ~i~~~~el~~~l~~~~ 228 (241)
T 2hoq_A 213 EIDNLESLLEVLARES 228 (241)
T ss_dssp EESSTTHHHHHHHHCC
T ss_pred EECCHHHHHHHHHHHh
Confidence 9999999999887654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.002 Score=72.25 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=38.6
Q ss_pred cCcEEEEEecCCCcCCCCCC--------C-CCCCHHHHHHHHHhhccCCCeEEEEcCCC
Q 045882 577 TSRRAIFLDYDGTVVPHHAL--------I-KKPSRDVIYVLRELCGDSNNTTFIVSGRG 626 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~--------~-~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 626 (832)
.+.|+++||+||||+...+. + ..+-+.+.++|+.| ++.|+.++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHH-HHTTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHH-HHCCCeEEEEeCCc
Confidence 35789999999999863210 0 12568899999999 68899999999976
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.002 Score=78.82 Aligned_cols=170 Identities=14% Similarity=0.099 Sum_probs=103.1
Q ss_pred HHHHHHhhccCcEEEEEecC-------------CCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHh
Q 045882 568 DRIVDAYKRTSRRAIFLDYD-------------GTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWL 634 (832)
Q Consensus 568 ~~i~~~y~~s~~rlI~lD~D-------------GTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 634 (832)
....+.|.+...|.+++=++ .+++.--....+|-+++.+++++| ++.|+.++++||.........-
T Consensus 444 ~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l-~~aGI~v~MiTGD~~~tA~~iA 522 (885)
T 3b8c_A 444 LSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETG 522 (885)
T ss_dssp HHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHH-HHTTCCCEEEESSCHHHHTHHH
T ss_pred HHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHH-HHcCCcEEEEcCCChHHHHHHH
Confidence 34455666667788887664 233321112456789999999999 7889999999999999888887
Q ss_pred cCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHH
Q 045882 635 APCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKE 714 (832)
Q Consensus 635 ~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~e 714 (832)
.+++-.. +. ..... +...+.+ . ..+.. +
T Consensus 523 ~~lGi~~----~~-----~~~~~----l~g~~~~----------------------~----------~~~~~-------~ 550 (885)
T 3b8c_A 523 RRLGMGT----NM-----YPSSA----LLGTHKD----------------------A----------NLASI-------P 550 (885)
T ss_dssp HTTTCTT----CC-----STTSS----CCBGGGG----------------------T----------TSCCS-------C
T ss_pred HHhCCcc----cc-----CCcce----eeccccc----------------------c----------ccchh-------H
Confidence 7654110 00 00000 0000000 0 00000 1
Q ss_pred HHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCC
Q 045882 715 LLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPI 794 (832)
Q Consensus 715 l~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~ 794 (832)
+. +.+.+.. -+.++.|. +|...++.+.+. | ..|+++||+.||.+||+.|+.
T Consensus 551 l~----~~~~~~~-------v~arv~P~--~K~~iV~~lq~~----g---~~Vam~GDGvNDapaLk~Adv--------- 601 (885)
T 3b8c_A 551 VE----ELIEKAD-------GFAGVFPE--HKYEIVKKLQER----K---HIVGMTGDGVNDAPALKKADI--------- 601 (885)
T ss_dssp HH----HHHHTSC-------CEECCCHH--HHHHHHHHHHHT----T---CCCCBCCCSSTTHHHHHHSSS---------
T ss_pred HH----HHHhhCc-------EEEEECHH--HHHHHHHHHHHC----C---CeEEEEcCCchhHHHHHhCCE---------
Confidence 11 1122221 23455565 899999998764 4 568999999999999999985
Q ss_pred CCcEEEEEeCCc----ccccceEeC--ChhHHHHHH
Q 045882 795 APEIFACTVGQK----PSKARYYLD--DEEDVLALL 824 (832)
Q Consensus 795 ~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L 824 (832)
+++||+. +..|++++. +...+.+.+
T Consensus 602 -----GIAmg~gtd~ak~aADivl~~~~~~~I~~ai 632 (885)
T 3b8c_A 602 -----GIAVADATDAARGASDIVLTEPGLSVIISAV 632 (885)
T ss_dssp -----CCCCSSSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred -----eEEeCCccHHHHHhcceeeccCchhHHHHHH
Confidence 5666653 567888874 345554444
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.00096 Score=67.51 Aligned_cols=63 Identities=21% Similarity=0.235 Sum_probs=41.1
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCCC-------------------------------CCCCCHHHHHHHHHhhc
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHAL-------------------------------IKKPSRDVIYVLRELCG 613 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~-------------------------------~~~~s~~~~~~L~~L~~ 613 (832)
.+++++.......+.|+|+||+||||++.... ...+.+.+.++|+.| +
T Consensus 23 ~~~~~i~~~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L-~ 101 (211)
T 2b82_A 23 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMH-V 101 (211)
T ss_dssp ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHH-H
T ss_pred eeHhhHhhhcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHH-H
Confidence 34555554333345799999999999983210 001334677778887 5
Q ss_pred cCCCeEEEEcCCChh
Q 045882 614 DSNNTTFIVSGRGKV 628 (832)
Q Consensus 614 d~g~~V~I~SGR~~~ 628 (832)
+.|+.++|+|+++..
T Consensus 102 ~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 102 RRGDAIFFVTGRSPT 116 (211)
T ss_dssp HHTCEEEEEECSCCC
T ss_pred HCCCEEEEEcCCcHH
Confidence 668888888888653
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.004 Score=64.61 Aligned_cols=75 Identities=16% Similarity=0.081 Sum_probs=59.8
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-c------cccceE
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQK-P------SKARYY 813 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-~------s~A~y~ 813 (832)
.+-.|..+++.+++.+ |++++++++|||+. ||+.|.+.+|.. ++.+.-|.. + ..|.|+
T Consensus 159 ~~Kp~~~~~~~~~~~~---g~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~~~~ad~v 224 (263)
T 3k1z_A 159 WPKPDPRIFQEALRLA---HMEPVVAAHVGDNYLCDYQGPRAVGMH-----------SFLVVGPQALDPVVRDSVPKEHI 224 (263)
T ss_dssp SCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHTHHHHTTTCE-----------EEEECCSSCCCHHHHHHSCGGGE
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHHHHHHCCCE-----------EEEEcCCCCCchhhcccCCCceE
Confidence 4556778899999999 99999999999996 999999999864 123332322 1 268999
Q ss_pred eCChhHHHHHHHHhhhh
Q 045882 814 LDDEEDVLALLKGLAAA 830 (832)
Q Consensus 814 l~~~~eV~~~L~~l~~~ 830 (832)
+++..++..+|..+...
T Consensus 225 ~~~l~el~~~l~~~~~~ 241 (263)
T 3k1z_A 225 LPSLAHLLPALDCLEGS 241 (263)
T ss_dssp ESSGGGHHHHHHHHHHC
T ss_pred eCCHHHHHHHHHHHHhc
Confidence 99999999999988754
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0034 Score=61.34 Aligned_cols=49 Identities=20% Similarity=0.295 Sum_probs=38.6
Q ss_pred ccCcEEEEEecCCCcCCCCC--------CCCCCCHHHHHHHHHhhccCCCeEEEEcCC
Q 045882 576 RTSRRAIFLDYDGTVVPHHA--------LIKKPSRDVIYVLRELCGDSNNTTFIVSGR 625 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 625 (832)
.+..|++++|+||||....+ ....+-+.+.++|++| ++.|..++|+|+.
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~G~~l~i~Tn~ 67 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQ 67 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEEC
T ss_pred CCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHH-HHCCCEEEEEECC
Confidence 46789999999999987421 1234668999999999 6789999999998
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.0058 Score=60.28 Aligned_cols=21 Identities=19% Similarity=0.139 Sum_probs=17.9
Q ss_pred HHHhhhhCCCCcceEEEEeCChhh
Q 045882 753 VLSTMISDGKLPDFVLCVGDDRSD 776 (832)
Q Consensus 753 Ll~~l~~~gi~~d~vl~~GDd~ND 776 (832)
.++.+ |++++++++|||+.+|
T Consensus 122 ~~~~~---~~~~~~~~~vgDs~~d 142 (193)
T 2i7d_A 122 FVERI---ILTRDKTVVLGDLLID 142 (193)
T ss_dssp HHTTE---EECSCGGGBCCSEEEE
T ss_pred HHHHc---CCCcccEEEECCchhh
Confidence 35566 8899999999999988
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.52 E-value=0.0034 Score=65.43 Aligned_cols=60 Identities=12% Similarity=0.154 Sum_probs=44.4
Q ss_pred cCcEEEEEecCCCcCCCCC-----------------------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCCh----hh
Q 045882 577 TSRRAIFLDYDGTVVPHHA-----------------------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGK----VS 629 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~----~~ 629 (832)
.++.+|+||+||||++... ....+-+.+.++|+.| ++.|+.|+|+|||+. ..
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L-~~~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYV-NSHNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHH-HHTTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCccchHHH
Confidence 5678999999999997321 0112345778889999 678999999999976 46
Q ss_pred HHHHhcCC
Q 045882 630 LGEWLAPC 637 (832)
Q Consensus 630 l~~~~~~l 637 (832)
...++..+
T Consensus 135 T~~~L~~l 142 (262)
T 3ocu_A 135 TIDDMKRL 142 (262)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66777653
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.0033 Score=65.46 Aligned_cols=60 Identities=17% Similarity=0.190 Sum_probs=43.7
Q ss_pred cCcEEEEEecCCCcCCCCC-----------------------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChh----h
Q 045882 577 TSRRAIFLDYDGTVVPHHA-----------------------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKV----S 629 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~----~ 629 (832)
.++.+++||+||||++... ....+-+.+.++|+.| ++.|+.|+|+|||+.. .
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L-~~~G~~i~ivTgR~~~~~r~~ 134 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYV-NANGGTMFFVSNRRDDVEKAG 134 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHH-HHTTCEEEEEEEEETTTSHHH
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCccccHHH
Confidence 3456999999999997320 0123446788899999 6789999999999754 6
Q ss_pred HHHHhcCC
Q 045882 630 LGEWLAPC 637 (832)
Q Consensus 630 l~~~~~~l 637 (832)
...++..+
T Consensus 135 T~~~L~~l 142 (260)
T 3pct_A 135 TVDDMKRL 142 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66777654
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.037 Score=56.78 Aligned_cols=65 Identities=15% Similarity=0.197 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEeCChhHH-HHH
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYLDDEEDV-LAL 823 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~~~~eV-~~~ 823 (832)
-.....+++.+ |++|+++++|||+.+|+.+-+.+|. .+|.|++. ...|+|++++..|+ .+.
T Consensus 173 p~~~~~a~~~l---g~~p~e~l~VGDs~~Di~aA~~aG~-------------~~i~v~~~~~~~~ad~vi~~l~eL~~~~ 236 (250)
T 4gib_A 173 PEIFLMSAKGL---NVNPQNCIGIEDASAGIDAINSANM-------------FSVGVGNYENLKKANLVVDSTNQLKFEY 236 (250)
T ss_dssp SHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTC-------------EEEEESCTTTTTTSSEEESSGGGCCHHH
T ss_pred HHHHHHHHHHh---CCChHHeEEECCCHHHHHHHHHcCC-------------EEEEECChhHhccCCEEECChHhCCHHH
Confidence 35677788888 9999999999999999999999985 36677653 46799999998886 555
Q ss_pred HHHh
Q 045882 824 LKGL 827 (832)
Q Consensus 824 L~~l 827 (832)
|+++
T Consensus 237 i~~~ 240 (250)
T 4gib_A 237 IQEK 240 (250)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.02 Score=62.71 Aligned_cols=100 Identities=17% Similarity=0.125 Sum_probs=61.9
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccC-----ccccc
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF-----IGCSP 486 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~s~ 486 (832)
|.+ .+.++.. .+++.||++|..+ |. .+..|+++++. |+|+.-. .+.+.
T Consensus 283 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-------------------P~v~~p~~~~~q~~~a~ 335 (402)
T 3ia7_A 283 VEA-HQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAGV-------------------PLVLVPHFATEAAPSAE 335 (402)
T ss_dssp EEE-ESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTTC-------------------CEEECGGGCGGGHHHHH
T ss_pred EEE-ecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhCC-------------------CEEEeCCCcccHHHHHH
Confidence 443 4567665 8899999988665 33 46689999955 4553332 23444
Q ss_pred cC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHH
Q 045882 487 SL---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSF 540 (832)
Q Consensus 487 ~l---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~ 540 (832)
.+ ..|+.+++. +.+++++++.++|+.+ +.+.++++..+.+ .......-++.+
T Consensus 336 ~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 393 (402)
T 3ia7_A 336 RVIELGLGSVLRPDQLEPASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEV 393 (402)
T ss_dssp HHHHTTSEEECCGGGCSHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHcCCEEEccCCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHH
Confidence 44 236788776 8899999999999853 3334444444433 334444444433
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.15 E-value=0.014 Score=63.06 Aligned_cols=35 Identities=9% Similarity=0.015 Sum_probs=28.7
Q ss_pred CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 601 SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 601 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
-++..++++.| +++|+.|+||||-....++.+...
T Consensus 145 ~~~~~~l~~~l-~~~G~~v~ivSas~~~~v~~~a~~ 179 (327)
T 4as2_A 145 FSGQRELYNKL-MENGIEVYVISAAHEELVRMVAAD 179 (327)
T ss_dssp CHHHHHHHHHH-HHTTCEEEEEEEEEHHHHHHHHTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHhh
Confidence 35577788888 688999999999999988888765
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=94.95 E-value=0.036 Score=61.25 Aligned_cols=99 Identities=17% Similarity=0.050 Sum_probs=60.7
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccC----cccccc
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF----IGCSPS 487 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~s~~ 487 (832)
+.+ .+.+++. .++..||++|..+ |. .+..|+++++. |+|+--+ ...+..
T Consensus 299 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 351 (415)
T 3rsc_A 299 VEA-HRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWGR-------------------PLVVVPQSFDVQPMARR 351 (415)
T ss_dssp EEE-ESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTTC-------------------CEEECCCSGGGHHHHHH
T ss_pred EEE-EecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhCC-------------------CEEEeCCcchHHHHHHH
Confidence 444 4567765 7888999988664 43 46689999955 4555222 223333
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHH
Q 045882 488 L---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHS 539 (832)
Q Consensus 488 l---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~ 539 (832)
+ ..|+.+++. +.++++++|.++|+.+ +.+.++++..+.+ ........++.
T Consensus 352 l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (415)
T 3rsc_A 352 VDQLGLGAVLPGEKADGDTLLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAADA 407 (415)
T ss_dssp HHHHTCEEECCGGGCCHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHcCCEEEcccCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3 236777775 8899999999999853 3334444444433 33444444443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.063 Score=60.07 Aligned_cols=143 Identities=10% Similarity=0.025 Sum_probs=81.4
Q ss_pred CEEEEEecccccc-----CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCC
Q 045882 334 KKVIVGVDDMDIF-----KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG 408 (832)
Q Consensus 334 ~~vil~VdRld~~-----KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~ 408 (832)
..|+++.|++... |.+...++|+..+ +++ +|.++... +.+++ . .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~~-----~~~~l---------------~--~ 316 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAE----IIATFDAQ-----QLEGV---------------A--N 316 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSE----EEECCCTT-----TTSSC---------------S--S
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCE----EEEEECCc-----chhhh---------------c--c
Confidence 4688999999864 8888888887543 232 44333211 11111 0 0
Q ss_pred cccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc----c
Q 045882 409 YEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG----C 484 (832)
Q Consensus 409 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~ 484 (832)
..+-+.+.+.+++. .+|..||++|. +-| ..+..|+++|+. |+|+.-+.+ .
T Consensus 317 ~~~~v~~~~~~~~~---~ll~~ad~~V~---~~G-~~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~n 370 (441)
T 2yjn_A 317 IPDNVRTVGFVPMH---ALLPTCAATVH---HGG-PGSWHTAAIHGV-------------------PQVILPDGWDTGVR 370 (441)
T ss_dssp CCSSEEECCSCCHH---HHGGGCSEEEE---CCC-HHHHHHHHHTTC-------------------CEEECCCSHHHHHH
T ss_pred CCCCEEEecCCCHH---HHHhhCCEEEE---CCC-HHHHHHHHHhCC-------------------CEEEeCCcccHHHH
Confidence 11123445678764 45799999996 344 457899999954 567766643 2
Q ss_pred cccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-cCCHHH
Q 045882 485 SPSL---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYIC-SHDVAY 535 (832)
Q Consensus 485 s~~l---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~ 535 (832)
++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+. ......
T Consensus 371 a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~ 425 (441)
T 2yjn_A 371 AQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP--AHRAGAARMRDDMLAEPSPAE 425 (441)
T ss_dssp HHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCCHHH
T ss_pred HHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHcCCCHHH
Confidence 3333 347888875 8899999999999743 33344444444333 344333
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=94.40 E-value=0.074 Score=54.96 Aligned_cols=68 Identities=16% Similarity=0.198 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHccc-ccCCCCCCCCCcEEEEEeCC--c-----ccccceEeCC
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQ-ATYGSSLPIAPEIFACTVGQ--K-----PSKARYYLDD 816 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~-~~~~~~~~~~~~~f~v~vG~--~-----~s~A~y~l~~ 816 (832)
+......+++.+ |++++++++|||+ .||+.+.+.+|. . +|.++. . ...|.|++++
T Consensus 178 ~p~~~~~~~~~~---~~~~~~~~~vGDs~~~Di~~A~~aG~~~-------------~i~v~~~~~~~~~~~~~~~~~i~~ 241 (260)
T 2gfh_A 178 APSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLKA-------------TVWINKSGRVPLTSSPMPHYMVSS 241 (260)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCSE-------------EEEECTTCCCCSSCCCCCSEEESS
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCCchhhHHHHHHCCCce-------------EEEEcCCCCCcCcccCCCCEEECC
Confidence 467888889998 9999999999996 999999999985 2 333332 1 2468899999
Q ss_pred hhHHHHHHHHhhh
Q 045882 817 EEDVLALLKGLAA 829 (832)
Q Consensus 817 ~~eV~~~L~~l~~ 829 (832)
..++..+|..+..
T Consensus 242 ~~el~~~l~~~~~ 254 (260)
T 2gfh_A 242 VLELPALLQSIDC 254 (260)
T ss_dssp GGGHHHHHHHHTT
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988764
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=94.18 E-value=0.089 Score=57.78 Aligned_cols=148 Identities=10% Similarity=0.032 Sum_probs=80.8
Q ss_pred CCEEEEEecccccc-CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCccc
Q 045882 333 GKKVIVGVDDMDIF-KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEP 411 (832)
Q Consensus 333 ~~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~p 411 (832)
.+.+++++|++... |+...+..+++.|.+ . +++ ++.++.+. +.+.+. ..+ ..
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~~~----~v~~~g~~-----~~~~l~--------------~~~--~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-DAD----FVLALGDL-----DISPLG--------------TLP--RN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-SSE----EEEECTTS-----CCGGGC--------------SCC--TT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-CCE----EEEEECCc-----Chhhhc--------------cCC--Cc
Confidence 46788999999655 354444444444432 2 333 55555332 100110 001 12
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEe----ccCcccc--
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVI----SEFIGCS-- 485 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~s-- 485 (832)
|.+ .+.++. ..++..||++|. .|-..+..||++|+. |+|+ .+-.+.+
T Consensus 285 v~~-~~~~~~---~~ll~~ad~~v~----~~G~~t~~Eal~~G~-------------------P~v~~p~~~dq~~~a~~ 337 (398)
T 3oti_A 285 VRA-VGWTPL---HTLLRTCTAVVH----HGGGGTVMTAIDAGI-------------------PQLLAPDPRDQFQHTAR 337 (398)
T ss_dssp EEE-ESSCCH---HHHHTTCSEEEE----CCCHHHHHHHHHHTC-------------------CEEECCCTTCCSSCTTH
T ss_pred EEE-EccCCH---HHHHhhCCEEEE----CCCHHHHHHHHHhCC-------------------CEEEcCCCchhHHHHHH
Confidence 444 456654 456778999984 344457899999955 4565 5556666
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHH
Q 045882 486 PSL---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHS 539 (832)
Q Consensus 486 ~~l---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~ 539 (832)
+.+ ..|+.+++. +.++++ ++|+. ++.++...+...+..........++.
T Consensus 338 ~~~~~~g~g~~~~~~~~~~~~l~----~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (398)
T 3oti_A 338 EAVSRRGIGLVSTSDKVDADLLR----RLIGD-ESLRTAAREVREEMVALPTPAETVRR 391 (398)
T ss_dssp HHHHHHTSEEECCGGGCCHHHHH----HHHHC-HHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHCCCEEeeCCCCCCHHHHH----HHHcC-HHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 666 347888776 455555 66663 33333333334444555655554443
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=94.17 E-value=0.076 Score=52.54 Aligned_cols=69 Identities=19% Similarity=0.248 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc-----cccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKP-----SKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~-----s~A~y~l~~~~eV 820 (832)
+-.....+++.+ |++|+++++|||+.+|+.+-+.+|.. .+++|+.|..+ ....+++.+++++
T Consensus 142 ~p~~~~~a~~~l---g~~p~e~l~VgDs~~Di~aA~~aG~~----------~i~~v~~g~~~~~~l~~~~~~~i~~~~el 208 (216)
T 3kbb_A 142 DPEIYLLVLERL---NVVPEKVVVFEDSKSGVEAAKSAGIE----------RIYGVVHSLNDGKALLEAGAVALVKPEEI 208 (216)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCC----------CEEEECCSSSCCHHHHHTTCSEEECGGGH
T ss_pred cHHHHHHHHHhh---CCCccceEEEecCHHHHHHHHHcCCc----------EEEEecCCCCCHHHHHhCCCcEECCHHHH
Confidence 346778888888 99999999999999999999999863 23566666421 2223455568999
Q ss_pred HHHHHHh
Q 045882 821 LALLKGL 827 (832)
Q Consensus 821 ~~~L~~l 827 (832)
++.|++|
T Consensus 209 i~~l~eL 215 (216)
T 3kbb_A 209 LNVLKEV 215 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=93.66 E-value=0.048 Score=55.33 Aligned_cols=65 Identities=9% Similarity=0.081 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----cc-ccceEeCChh
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PS-KARYYLDDEE 818 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s-~A~y~l~~~~ 818 (832)
..|..+++.+ |++++.+++|||+.+|+.+.+.+|.. ++..|.. .. .|.+.+++..
T Consensus 150 ~~K~~~~~~~-------~~~~~~~~~vGDs~~Di~~a~~aG~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 209 (236)
T 2fea_A 150 CCKPSVIHEL-------SEPNQYIIMIGDSVTDVEAAKLSDLC-------------FARDYLLNECREQNLNHLPYQDFY 209 (236)
T ss_dssp SCHHHHHHHH-------CCTTCEEEEEECCGGGHHHHHTCSEE-------------EECHHHHHHHHHTTCCEECCSSHH
T ss_pred CcHHHHHHHH-------hccCCeEEEEeCChHHHHHHHhCCee-------------eechHHHHHHHHCCCCeeecCCHH
Confidence 4577776554 88999999999999999999999853 2222211 12 2778889999
Q ss_pred HHHHHHHHhh
Q 045882 819 DVLALLKGLA 828 (832)
Q Consensus 819 eV~~~L~~l~ 828 (832)
++..+|..+.
T Consensus 210 el~~~l~~~~ 219 (236)
T 2fea_A 210 EIRKEIENVK 219 (236)
T ss_dssp HHHHHHHTSH
T ss_pred HHHHHHHHhH
Confidence 9999888754
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=93.10 E-value=0.023 Score=55.74 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=31.4
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+.+.+++.+ |++++++++|||+.||+.|.+.+|.
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 186 (206)
T 2b0c_A 152 RIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 186 (206)
T ss_dssp HHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred HHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHcCC
Confidence 4666788888 9999999999999999999999985
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=93.08 E-value=0.096 Score=51.44 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
-.+..+.+.+++.+ |++++++++|||+.||+.|.+.+|.
T Consensus 150 Kp~~~~~~~~~~~~---~~~~~~~~~igD~~~Di~~a~~aG~ 188 (211)
T 2i6x_A 150 KPNEDIFLEMIADS---GMKPEETLFIDDGPANVATAERLGF 188 (211)
T ss_dssp TTSHHHHHHHHHHH---CCCGGGEEEECSCHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHh---CCChHHeEEeCCCHHHHHHHHHcCC
Confidence 34566889999999 9999999999999999999999985
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=92.19 E-value=0.12 Score=50.34 Aligned_cols=39 Identities=10% Similarity=0.044 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
-.+...++.+++.+ |++++++++|||+.||+.|.+.+|.
T Consensus 141 Kp~~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 179 (200)
T 3cnh_A 141 KPNPAMYRLGLTLA---QVRPEEAVMVDDRLQNVQAARAVGM 179 (200)
T ss_dssp TTCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHCCC
Confidence 34567888999998 9999999999999999999999986
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=92.06 E-value=0.64 Score=55.59 Aligned_cols=175 Identities=13% Similarity=0.084 Sum_probs=106.8
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
|..++.+..++.. =-+..+..+.++|++-|+-+ |++...+. .....+ .+.+++ +|-. -.-|
T Consensus 522 ~~v~f~~fN~~~K--i~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~~~l----~~~~~~----~gi~-~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQLYK--IDPSTLQMWANILKRVPNSV----LWLLRFPA----VGEPNI----QQYAQN----MGLP-QNRI 582 (723)
T ss_dssp TSEEEECCSCGGG--CCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGHHHH----HHHHHH----TTCC-GGGE
T ss_pred CCEEEEeCCcccc--CCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHHHHH----HHHHHh----cCCC-cCeE
Confidence 5566666666554 45888999999999999876 77776432 111223 333332 2422 2336
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccc-----cc
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCS-----PS 487 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s-----~~ 487 (832)
+|.. ..+.++..+.|+.+|||+-|--+-| +.+..||+.++. +|+|--+..- .+
T Consensus 583 ~f~~-~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~Gv--------------------Pvvt~~g~~~~sR~~~s 640 (723)
T 4gyw_A 583 IFSP-VAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGT--------------------PMVTMPGETLASRVAAS 640 (723)
T ss_dssp EEEE-CCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHTTC--------------------CEEBCCCSSGGGTHHHH
T ss_pred EECC-CCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHcCC--------------------CEEEccCCCccHhHHHH
Confidence 6554 6899999999999999999998877 688889999844 3443221110 01
Q ss_pred C-C--C--ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc---CCHHHHHHHHHHHHHHHHHhh
Q 045882 488 L-S--G--AIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS---HDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 488 l-~--~--a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~---~~~~~W~~~~l~~l~~~~~~~ 551 (832)
+ . | -+ | -+|.++..+.-.+.-+ ..+.+....+++++...+ +|...|++.|-..+.+.++..
T Consensus 641 ~l~~~gl~e~-i-a~~~~~Y~~~a~~la~-d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 641 QLTCLGCLEL-I-AKNRQEYEDIAVKLGT-DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp HHHHHTCGGG-B-CSSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCccc-c-cCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 1 0 0 12 2 2455555443333333 334444444455554443 688999998888888877665
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=91.99 E-value=0.11 Score=51.23 Aligned_cols=37 Identities=11% Similarity=-0.023 Sum_probs=28.9
Q ss_pred CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 601 SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 601 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
-+.+.++|+.| ++.|..++|+|+.+...+...+..++
T Consensus 86 ~pg~~~~l~~L-~~~g~~~~i~tn~~~~~~~~~l~~~~ 122 (216)
T 3kbb_A 86 NPGVREALEFV-KSKRIKLALATSTPQREALERLRRLD 122 (216)
T ss_dssp CTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTT
T ss_pred CccHHHHHHHH-HHcCCCcccccCCcHHHHHHHHHhcC
Confidence 34566788888 57899999999999988887776543
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.90 E-value=0.35 Score=49.13 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=46.9
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCChhH
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEED 819 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~e 819 (832)
-......++.+ |++|+++++|||+.+|+.+-+.+|. .+|.|+...+.|+..+++..+
T Consensus 152 p~~~~~a~~~l---g~~p~e~l~VgDs~~di~aA~~aG~-------------~~I~V~~g~~~ad~~~~~~~~ 208 (243)
T 4g9b_A 152 PEIFLAACAGL---GVPPQACIGIEDAQAGIDAINASGM-------------RSVGIGAGLTGAQLLLPSTES 208 (243)
T ss_dssp THHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHHTC-------------EEEEESTTCCSCSEEESSGGG
T ss_pred HHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCC-------------EEEEECCCCCcHHHhcCChhh
Confidence 34667778888 9999999999999999999999986 477787777788888876443
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=91.31 E-value=0.18 Score=50.32 Aligned_cols=38 Identities=11% Similarity=0.144 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+..+.+.+++.+ |++++++++|||+.||+.|.+.+|..
T Consensus 175 ~~~~~~~~~~~~---g~~~~~~~~vGD~~~Di~~a~~aG~~ 212 (229)
T 4dcc_A 175 EPEIFKAVTEDA---GIDPKETFFIDDSEINCKVAQELGIS 212 (229)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEECSCHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHc---CCCHHHeEEECCCHHHHHHHHHcCCE
Confidence 348889999999 99999999999999999999999863
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=90.93 E-value=0.12 Score=50.35 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=19.8
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHh
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLREL 611 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L 611 (832)
+..|+|+||+||||++. . ......++.++
T Consensus 5 ~~~k~viFDlDGTL~d~---~---~~~~~~~~~~~ 33 (206)
T 2b0c_A 5 EAKMLYIFDLGNVIVDI---D---FNRVLGAWSDL 33 (206)
T ss_dssp -CCCEEEECCBTTTEEE---E---THHHHHHHHHH
T ss_pred ccccEEEEcCCCeeecC---c---HHHHHHHHHHh
Confidence 35789999999999982 2 14455555544
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.37 E-value=0.13 Score=51.09 Aligned_cols=61 Identities=10% Similarity=0.009 Sum_probs=46.3
Q ss_pred ccCcEEEEEecCCCcCCCCCCC--------------------CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhc
Q 045882 576 RTSRRAIFLDYDGTVVPHHALI--------------------KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLA 635 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~--------------------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 635 (832)
..+++.+++|+||||+...... -.+-|.+.+.|+.|. +. ..++|+|.-+...+...+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~-~~-~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMG-QL-FECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHH-HH-SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHH-cC-CeEEEEcCCCHHHHHHHHH
Confidence 4578999999999999732110 012467889999995 44 9999999999999988887
Q ss_pred CCC
Q 045882 636 PCE 638 (832)
Q Consensus 636 ~l~ 638 (832)
.+.
T Consensus 103 ~ld 105 (195)
T 2hhl_A 103 LLD 105 (195)
T ss_dssp HHC
T ss_pred HhC
Confidence 653
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=90.09 E-value=0.66 Score=51.14 Aligned_cols=137 Identities=10% Similarity=0.018 Sum_probs=79.8
Q ss_pred CCEEEEEeccc-cccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCccc
Q 045882 333 GKKVIVGVDDM-DIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEP 411 (832)
Q Consensus 333 ~~~vil~VdRl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~p 411 (832)
...++++.|++ +..|.+...++|++++ + .+ +++++|... .+ . ... + ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~---~v~~~g~~~----~~---~------------~~~--~--~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR---VILSRGWAD----LV---L------------PDD--G--AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC---EEECTTCTT----CC---C------------SSC--G--GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce---EEEEeCCCc----cc---c------------cCC--C--CC
Confidence 35789999999 6888888888887654 2 22 223233211 00 0 000 0 12
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc----cccc
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG----CSPS 487 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~s~~ 487 (832)
+ .+.+.+++.+ ++..||+||.. -|. .+..|+++++. |+|+--+.+ .+..
T Consensus 287 v-~~~~~~~~~~---~l~~~d~~v~~---~G~-~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na~~ 339 (415)
T 1iir_A 287 C-FAIGEVNHQV---LFGRVAAVIHH---GGA-GTTHVAARAGA-------------------PQILLPQMADQPYYAGR 339 (415)
T ss_dssp E-EECSSCCHHH---HGGGSSEEEEC---CCH-HHHHHHHHHTC-------------------CEEECCCSTTHHHHHHH
T ss_pred E-EEeCcCChHH---HHhhCCEEEeC---CCh-hHHHHHHHcCC-------------------CEEECCCCCccHHHHHH
Confidence 3 3456788765 46999999964 454 67889999955 456554433 2233
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc
Q 045882 488 L---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICS 530 (832)
Q Consensus 488 l---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (832)
+ ..|+.+++. +.++++++|.++ +. + +.+++.++..+.+..
T Consensus 340 l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~-~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 340 VAELGVGVAHDGPIPTFDSLSAALATA-LT-P-ETHARATAVAGTIRT 384 (415)
T ss_dssp HHHHTSEEECSSSSCCHHHHHHHHHHH-TS-H-HHHHHHHHHHHHSCS
T ss_pred HHHCCCcccCCcCCCCHHHHHHHHHHH-cC-H-HHHHHHHHHHHHHhh
Confidence 3 346777653 789999999998 63 3 333444444444433
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=90.00 E-value=0.28 Score=48.96 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=25.3
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHh
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWL 634 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 634 (832)
+.+.+.++|+.| ++. ..++|+|+.+...+...+
T Consensus 113 ~~~~~~~~l~~l-~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 113 IPTYKLDLLLKL-REK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCHHHHHHHHHH-TTT-SEEEEEECCCHHHHHHHH
T ss_pred ccHHHHHHHHHH-Hhc-CcEEEEECCChHHHHHHH
Confidence 346778888888 555 999999999888776443
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=89.75 E-value=0.58 Score=51.64 Aligned_cols=99 Identities=13% Similarity=0.013 Sum_probs=61.0
Q ss_pred ecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc----ccccC--
Q 045882 415 IDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG----CSPSL-- 488 (832)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~s~~l-- 488 (832)
+.+.+++. .+|..||++|.. -|. .+..|+++++. |+|+.-+.+ .+..+
T Consensus 309 ~~~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na~~l~~ 362 (424)
T 2iya_A 309 VHQWVPQL---DILTKASAFITH---AGM-GSTMEALSNAV-------------------PMVAVPQIAEQTMNAERIVE 362 (424)
T ss_dssp EESSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTTC-------------------CEEECCCSHHHHHHHHHHHH
T ss_pred EecCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcCC-------------------CEEEecCccchHHHHHHHHH
Confidence 34567765 689999987753 343 57889999955 456655432 12222
Q ss_pred -CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHH
Q 045882 489 -SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541 (832)
Q Consensus 489 -~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 541 (832)
..|+.+++. +.++++++|.++|+.+ +.+.+..+..+.+...+...-+...+
T Consensus 363 ~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (424)
T 2iya_A 363 LGLGRHIPRDQVTAEKLREAVLAVASDP--GVAERLAAVRQEIREAGGARAAADIL 416 (424)
T ss_dssp TTSEEECCGGGCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCEEEcCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 236777665 8899999999999743 34444555555554444433333333
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=89.05 E-value=0.19 Score=49.15 Aligned_cols=61 Identities=8% Similarity=-0.003 Sum_probs=45.9
Q ss_pred ccCcEEEEEecCCCcCCCCCCC--------------------CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhc
Q 045882 576 RTSRRAIFLDYDGTVVPHHALI--------------------KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLA 635 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~--------------------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 635 (832)
..+++.+++|+|+||+...... -.+-|.+.+.|+++. +. ..++|+|..+...+...+.
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~-~~-~~i~I~T~~~~~~a~~vl~ 89 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG-EL-FECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHH-HH-SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHH-hC-CCEEEEcCCCHHHHHHHHH
Confidence 3567999999999999732110 013467888999995 43 9999999999999888887
Q ss_pred CCC
Q 045882 636 PCE 638 (832)
Q Consensus 636 ~l~ 638 (832)
.+.
T Consensus 90 ~ld 92 (181)
T 2ght_A 90 LLD 92 (181)
T ss_dssp HHC
T ss_pred HHC
Confidence 653
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=88.85 E-value=0.21 Score=50.50 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=28.3
Q ss_pred CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 601 SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 601 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
-+.+.++|+.| ++.|+.++|+|+.+...+..++..
T Consensus 79 ~pg~~~~l~~L-~~~g~~~~ivS~~~~~~~~~~l~~ 113 (236)
T 2fea_A 79 REGFREFVAFI-NEHEIPFYVISGGMDFFVYPLLEG 113 (236)
T ss_dssp CTTHHHHHHHH-HHHTCCEEEEEEEEHHHHHHHHTT
T ss_pred CccHHHHHHHH-HhCCCeEEEEeCCcHHHHHHHHhc
Confidence 35567788888 577999999999998888888764
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.46 E-value=0.11 Score=51.50 Aligned_cols=31 Identities=23% Similarity=0.176 Sum_probs=20.6
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHh
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLREL 611 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L 611 (832)
+.|+|+||+||||++ ......+...++++++
T Consensus 3 ~ik~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 33 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVD---SEIIAAQVESRLLTEA 33 (229)
T ss_dssp CCSEEEECSBTTTBC---CHHHHHHHHHHHHHHT
T ss_pred CccEEEEcCCCCcCc---cHHHHHHHHHHHHHHh
Confidence 368999999999998 3333334444555544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=87.40 E-value=0.6 Score=49.05 Aligned_cols=50 Identities=20% Similarity=0.226 Sum_probs=38.6
Q ss_pred CcEEEEEecCCCcCCCCCC---------CCCCCHHHHHHHHHhhccCCCeEEEEcCCChh
Q 045882 578 SRRAIFLDYDGTVVPHHAL---------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKV 628 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~---------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 628 (832)
..+.+++|.|||+...... ...+-+.+.++|+.| ++.|+.++|+|||+..
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRESG 216 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCCC
T ss_pred ccceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHH-HHCCCeEEEEeCCCcc
Confidence 4578999999998763211 112468999999999 6789999999999754
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=86.64 E-value=0.093 Score=53.08 Aligned_cols=32 Identities=31% Similarity=0.294 Sum_probs=22.9
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHh
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLREL 611 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L 611 (832)
.+.|+|+||+||||++ ....+++.+.++++++
T Consensus 20 m~ik~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 51 (254)
T 3umc_A 20 QGMRAILFDVFGTLVD---WRSSLIEQFQALEREL 51 (254)
T ss_dssp SSCCEEEECCBTTTEE---HHHHHHHHHHHHHHHS
T ss_pred cCCcEEEEeCCCccEe---cCccHHHHHHHHHHHh
Confidence 3579999999999998 3344455566666655
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=86.02 E-value=0.13 Score=51.83 Aligned_cols=32 Identities=25% Similarity=0.166 Sum_probs=22.6
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHh
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLREL 611 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L 611 (832)
.+.|+|+||+||||++ ....+.+.+.++++++
T Consensus 13 ~~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 44 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVD---WRTGIATAVADYAARH 44 (254)
T ss_dssp SBCCEEEECCBTTTBC---HHHHHHHHHHHHHHHT
T ss_pred CCceEEEEeCCCceec---CchHHHHHHHHHHHHh
Confidence 3578999999999998 3334445556666555
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.24 E-value=0.15 Score=51.61 Aligned_cols=32 Identities=13% Similarity=0.098 Sum_probs=21.9
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHh
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLREL 611 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L 611 (832)
.+.|+|+||+||||++ ......+...++++++
T Consensus 28 ~~ik~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 59 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLD---TERLYSVVFQEICNRY 59 (250)
T ss_dssp CCCSEEEEETBTTTBC---HHHHHHHHHHHHHHHT
T ss_pred cCCcEEEEcCCCCcCC---CHHHHHHHHHHHHHHh
Confidence 4579999999999998 3333444555555554
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=85.17 E-value=5.5 Score=43.53 Aligned_cols=138 Identities=12% Similarity=0.043 Sum_probs=80.3
Q ss_pred CCCEEEEEecccc-ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 332 KGKKVIVGVDDMD-IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 332 ~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
+.+.|+++.|++. ..+.+...++|++++ +++ +|.++.+.... .. +.. .
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~~---------------~~~--~ 268 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----RI---------------DEG--D 268 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----CS---------------SCC--T
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----cc---------------cCC--C
Confidence 3467889999998 666666677776553 233 33333221000 00 000 1
Q ss_pred cEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc---
Q 045882 411 PVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS--- 487 (832)
Q Consensus 411 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~--- 487 (832)
.+.+ .+.+++.+ ++..||++|-.+ |. .+..|+++++. |+|+--+.|-.+.
T Consensus 269 ~v~~-~~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~Gv-------------------P~v~~p~~~dQ~~na~ 321 (404)
T 3h4t_A 269 DCLV-VGEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAGA-------------------PQVVVPQKADQPYYAG 321 (404)
T ss_dssp TEEE-ESSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHTC-------------------CEEECCCSTTHHHHHH
T ss_pred CEEE-ecCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcCC-------------------CEEEcCCcccHHHHHH
Confidence 2444 45777655 557899988544 33 45679999955 3455444432111
Q ss_pred -C---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc
Q 045882 488 -L---SGAIRVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICS 530 (832)
Q Consensus 488 -l---~~a~~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (832)
+ ..|+.+++. +.+++++++.++|+ + +.+.++++..+.+..
T Consensus 322 ~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 322 RVADLGVGVAHDGPTPTVESLSAALATALT-P--GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHHHTSEEECSSSSCCHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCC
T ss_pred HHHHCCCEeccCcCCCCHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhh
Confidence 2 236666553 78999999999997 3 344555565555555
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=84.79 E-value=1.5 Score=48.15 Aligned_cols=137 Identities=9% Similarity=0.019 Sum_probs=79.5
Q ss_pred CCEEEEEecccc---ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCc
Q 045882 333 GKKVIVGVDDMD---IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGY 409 (832)
Q Consensus 333 ~~~vil~VdRld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~ 409 (832)
...++++.|++. ..|.+...++|++++ .++ +++++|.... + . ....
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~---~v~~~g~~~~----~---~------------~~~~---- 285 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRR---VILSRGWTEL----V---L------------PDDR---- 285 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCC---EEEECTTTTC----C---C------------SCCC----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCe---EEEEeCCccc----c---c------------cCCC----
Confidence 356889999984 566677777777543 232 2333332110 0 0 0011
Q ss_pred ccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc----cc
Q 045882 410 EPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG----CS 485 (832)
Q Consensus 410 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~s 485 (832)
..+. +.+.+++.+ +|..||++|. +-|.| +..|+++|+. |+|+--+.+ .+
T Consensus 286 ~~v~-~~~~~~~~~---ll~~~d~~v~---~~G~~-t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na 338 (416)
T 1rrv_A 286 DDCF-AIDEVNFQA---LFRRVAAVIH---HGSAG-TEHVATRAGV-------------------PQLVIPRNTDQPYFA 338 (416)
T ss_dssp TTEE-EESSCCHHH---HGGGSSEEEE---CCCHH-HHHHHHHHTC-------------------CEEECCCSBTHHHHH
T ss_pred CCEE-EeccCChHH---HhccCCEEEe---cCChh-HHHHHHHcCC-------------------CEEEccCCCCcHHHH
Confidence 1243 456777654 5699999986 45654 8899999955 355543332 33
Q ss_pred ccC---CCceEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc
Q 045882 486 PSL---SGAIRVNP--WDIDAVADALHDAITMSDVEKQLRHEKHYRYICS 530 (832)
Q Consensus 486 ~~l---~~a~~VnP--~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (832)
..+ ..|+.+++ .+.++++++|.++ +. + +.+.++++..+.+..
T Consensus 339 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~-~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 339 GRVAALGIGVAHDGPTPTFESLSAALTTV-LA-P-ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHHTSEEECSSSCCCHHHHHHHHHHH-TS-H-HHHHHHHHHTTTCCC
T ss_pred HHHHHCCCccCCCCCCCCHHHHHHHHHHh-hC-H-HHHHHHHHHHHHHhh
Confidence 333 33677754 5789999999998 63 3 444455555444443
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=84.43 E-value=0.49 Score=45.83 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=20.0
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHh
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLREL 611 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L 611 (832)
+.|+|+||+||||++. . ........+++++
T Consensus 3 ~~k~viFDlDGTL~d~---~-~~~~~~~~~~~~~ 32 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTN---G-WDREQRADVAQRF 32 (200)
T ss_dssp CCCEEEECCBTTTBCC---S-SCHHHHHHHHHHH
T ss_pred CceEEEEeCCCeeECC---C-cchHHHHHHHHHc
Confidence 4689999999999983 2 2334444555554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=84.42 E-value=0.16 Score=50.51 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=20.1
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHh
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLREL 611 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L 611 (832)
+.|+|+||+||||++ ......+...++++++
T Consensus 4 ~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 34 (240)
T 3qnm_A 4 KYKNLFFDLDDTIWA---FSRNARDTFEEVYQKY 34 (240)
T ss_dssp CCSEEEECCBTTTBC---HHHHHHHHHHHHHHHT
T ss_pred CceEEEEcCCCCCcC---chhhHHHHHHHHHHHc
Confidence 578999999999998 3333333444444443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=84.18 E-value=0.64 Score=51.14 Aligned_cols=39 Identities=13% Similarity=0.191 Sum_probs=33.8
Q ss_pred CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 599 KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 599 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
++.+++.++++.| ++.|+.|+|+||-....++.+...++
T Consensus 221 r~~p~~~eLi~~L-~~~G~~v~IVSgg~~~~v~~ia~~lg 259 (385)
T 4gxt_A 221 RTLDEMVDLYRSL-EENGIDCYIVSASFIDIVRAFATDTN 259 (385)
T ss_dssp EECHHHHHHHHHH-HHTTCEEEEEEEEEHHHHHHHHHCTT
T ss_pred eeCHHHHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHHhC
Confidence 3578999999999 78899999999999999998887653
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=83.26 E-value=0.5 Score=53.26 Aligned_cols=24 Identities=21% Similarity=0.188 Sum_probs=19.8
Q ss_pred CHHHHHHHHHhhccCCCeEEEEcCC
Q 045882 601 SRDVIYVLRELCGDSNNTTFIVSGR 625 (832)
Q Consensus 601 s~~~~~~L~~L~~d~g~~V~I~SGR 625 (832)
-+.+.++|+.| ++.|++++|+|+.
T Consensus 102 ~~~~~~~L~~L-~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 102 NRPMLQAALML-RKKGFTTAILTNT 125 (555)
T ss_dssp CHHHHHHHHHH-HHTTCEEEEEECC
T ss_pred ChhHHHHHHHH-HHCCCEEEEEeCC
Confidence 35567788888 6789999999997
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=82.61 E-value=0.19 Score=49.28 Aligned_cols=15 Identities=33% Similarity=0.638 Sum_probs=13.4
Q ss_pred CcEEEEEecCCCcCC
Q 045882 578 SRRAIFLDYDGTVVP 592 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~ 592 (832)
..|+|+||+||||++
T Consensus 3 ~~k~iifDlDGTL~d 17 (209)
T 2hdo_A 3 TYQALMFDIDGTLTN 17 (209)
T ss_dssp CCSEEEECSBTTTEE
T ss_pred cccEEEEcCCCCCcC
Confidence 357999999999998
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=82.45 E-value=0.73 Score=46.08 Aligned_cols=72 Identities=13% Similarity=0.050 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--c------c-ccceEe
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--P------S-KARYYL 814 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~------s-~A~y~l 814 (832)
..|...++.+++ |++++++++|||+.+|+.+++.+...+ -.++.|.-|.. + . .|.+++
T Consensus 146 ~~K~~~~~~~~~-----~~~~~~~~~vgDs~~d~~di~~A~~aG--------~~~i~v~~g~~~~~~~~l~~~~~~~~~i 212 (231)
T 2p11_A 146 IHKELMLDQVME-----CYPARHYVMVDDKLRILAAMKKAWGAR--------LTTVFPRQGHYAFDPKEISSHPPADVTV 212 (231)
T ss_dssp SSGGGCHHHHHH-----HSCCSEEEEECSCHHHHHHHHHHHGGG--------EEEEEECCSSSSSCHHHHHHSCCCSEEE
T ss_pred CChHHHHHHHHh-----cCCCceEEEEcCccchhhhhHHHHHcC--------CeEEEeCCCCCCCcchhccccCCCceee
Confidence 356555555554 578999999999999776666654321 11234444421 1 1 388999
Q ss_pred CChhHHHHHHHHhh
Q 045882 815 DDEEDVLALLKGLA 828 (832)
Q Consensus 815 ~~~~eV~~~L~~l~ 828 (832)
++..++..+|.++.
T Consensus 213 ~~~~el~~~l~~~~ 226 (231)
T 2p11_A 213 ERIGDLVEMDAEWL 226 (231)
T ss_dssp SSGGGGGGCGGGGC
T ss_pred cCHHHHHHHHHHHH
Confidence 99999888776554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=81.24 E-value=0.27 Score=49.51 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=21.2
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHh
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLREL 611 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L 611 (832)
.|+|+||+||||++ ......+...++++++
T Consensus 2 ~k~iiFDlDGTL~d---~~~~~~~~~~~~~~~~ 31 (241)
T 2hoq_A 2 VKVIFFDLDDTLVD---TSKLAEIARKNAIENM 31 (241)
T ss_dssp CCEEEECSBTTTBC---HHHHHHHHHHHHHHHH
T ss_pred ccEEEEcCCCCCCC---ChhhHHHHHHHHHHHH
Confidence 47999999999998 3333444555666666
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=80.47 E-value=2.2 Score=46.84 Aligned_cols=57 Identities=23% Similarity=0.248 Sum_probs=43.6
Q ss_pred CCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---------ccccceEeCChhHHHHHHHHhh
Q 045882 761 GKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---------PSKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 761 gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---------~s~A~y~l~~~~eV~~~L~~l~ 828 (832)
+++++++++|||+.+|+.+-+.+|.. +++|.-|.. ...|++++++..++..+|....
T Consensus 312 ~v~p~e~l~VGDs~~Di~aAk~AG~~-----------~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l~~~~ 377 (384)
T 1qyi_A 312 IVNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLL 377 (384)
T ss_dssp CSCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTT
T ss_pred CCCCcCeEEEcCCHHHHHHHHHcCCE-----------EEEECCCccccccHHHHhhcCCCEEECCHHHHHHHHHHHH
Confidence 47899999999999999999999863 234444431 1368899999999988886543
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=80.28 E-value=1 Score=44.93 Aligned_cols=60 Identities=8% Similarity=0.006 Sum_probs=46.5
Q ss_pred cCcEEEEEecCCCcCCCCCCC-----CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALI-----KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~-----~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+++.+++|+|+||+...... -..-|.+.+.|+.++ ++..++|.|.-....+...+..+.
T Consensus 32 ~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~--~~yeivI~Tas~~~ya~~vl~~LD 96 (204)
T 3qle_A 32 QRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLS--QYYEIVLFSSNYMMYSDKIAEKLD 96 (204)
T ss_dssp CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHT--TTEEEEEECSSCHHHHHHHHHHTS
T ss_pred CCCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHH--hCCEEEEEcCCcHHHHHHHHHHhC
Confidence 457899999999999732111 123468889999994 589999999999999888887664
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 832 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-115 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 1e-30 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 6e-09 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-07 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 1e-06 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-06 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 6e-06 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 6e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-05 | |
| d2amya1 | 243 | c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human ( | 3e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 7e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.003 | |
| d2obba1 | 122 | c.108.1.25 (A:1-122) Hypothetical protein BT0820 { | 0.004 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 357 bits (916), Expect = e-115
Identities = 130/485 (26%), Positives = 222/485 (45%), Gaps = 36/485 (7%)
Query: 62 IIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEE 121
++V+N + + +G L G + G + E +
Sbjct: 4 VVVSNRIAPPDEHAASAGG----------LAVGILGALKAAGGLWFGWSGETGN--EDQP 51
Query: 122 VAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYV 181
+ + LS ++Y+ F LWP FHY L + +F R W Y+
Sbjct: 52 LKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDGYL 106
Query: 182 SANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT 241
N + ADK++ ++ + D +WIHDYHL+ LR+R ++GFFLH PFP+ EI+
Sbjct: 107 RVNALLADKLLPLLQDD-DIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNA 165
Query: 242 LPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKI 301
LP + +L+ L + DL+GF T + FL C S + + S + + +G+ ++
Sbjct: 166 LPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRTEV 222
Query: 302 LHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLK 361
+GI + P K+ +++ + K + I V+ +D KG+ + LA E LL+
Sbjct: 223 YPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLE 281
Query: 362 VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPL 421
+P+ GK+ QI +R + QD + + RIN YG G+ P+ +++
Sbjct: 282 KYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDR 341
Query: 422 HEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF 481
+ ++ +V +RDGMNL+ +Y P +LV+S+F
Sbjct: 342 KLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAA--QDPA------------NPGVLVLSQF 387
Query: 482 IGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541
G + L+ A+ VNP+D D VA AL A+TMS E+ RH + I +D+ +W F+
Sbjct: 388 AGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFI 447
Query: 542 QDLER 546
DL++
Sbjct: 448 SDLKQ 452
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 118 bits (296), Expect = 1e-30
Identities = 50/253 (19%), Positives = 91/253 (35%), Gaps = 31/253 (12%)
Query: 582 IFLDYDGTVVPHHALI--KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
IFLDYDGT+VP ++ ++ +L T+IV+GR + +L
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPLDI- 59
Query: 640 LGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWH 699
+ HG + + + + + RI + + G I +K A+++H
Sbjct: 60 -NMICYHGACSKINGQIVYNNGSDRFLGVFDRI-YEDTRSWVSDFPGLRIYRKNLAVLYH 117
Query: 700 YQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMIS 759
+L +E + V G I+E++ GV KG V
Sbjct: 118 LGLMGA----DMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRG---- 169
Query: 760 DGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEED 819
+ GDD +DE FE + VG+ + A++++ D +
Sbjct: 170 ----ERPAIIAGDDATDEAAFE------------ANDDALTIKVGEGETHAKFHVADYIE 213
Query: 820 VLALLKGLAAASK 832
+ +LK +
Sbjct: 214 MRKILKFIEMLGV 226
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 55.4 bits (132), Expect = 6e-09
Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 16/207 (7%)
Query: 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS---LGEWL 634
+ + D D T V + + + N +GR S L + +
Sbjct: 2 RQLLLISDLDNTWVGDQQAL-----EHLQEYLGDR-RGNFYLAYATGRSYHSARELQKQV 55
Query: 635 APCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKET 694
E G + + + + ++ + I + + + S +E+
Sbjct: 56 GLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPW 115
Query: 695 ALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVL 754
+ +H A Q E+L V+ V++ PQ KG + +
Sbjct: 116 KISYHLDPQACPTVIDQLTEMLKETG----IPVQVIFSSGKDVDLLPQRSNKGNATQYLQ 171
Query: 755 STMISDGKLPDFVLCVGDDRSDEDMFE 781
+ + P L GD +D +FE
Sbjct: 172 QHLAME---PSQTLVCGDSGNDIGLFE 195
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 50.0 bits (118), Expect = 3e-07
Identities = 33/202 (16%), Positives = 60/202 (29%), Gaps = 21/202 (10%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
R +D DG + LI + + I + T ++SG + A
Sbjct: 4 RLAAIDVDGNLTDRDRLISTKAIESIRSAEK----KGLTVSLLSGN---VIPVVYALKIF 56
Query: 640 LGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWH 699
LGI +G ++ F T ++ ++ T I
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 700 YQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMIS 759
+ G E +D++ + V+ + +G K K
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK---LKEM 162
Query: 760 DGKLPDFVLCVGDDRSDEDMFE 781
D +L +GD +D MF+
Sbjct: 163 YSLEYDEILVIGDSNNDMPMFQ 184
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 48.2 bits (113), Expect = 1e-06
Identities = 28/218 (12%), Positives = 57/218 (26%), Gaps = 22/218 (10%)
Query: 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLG 641
+F D DGT++ H+ +P+ + LRE +N + S + + G
Sbjct: 7 VFSDLDGTLLDSHSYDWQPAAPWLTRLRE----ANVPVILCSSKTSAEMLYLQKTLGLQG 62
Query: 642 IAAEH----GYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALV 697
+ L + + + I+ + L +
Sbjct: 63 LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDAT 122
Query: 698 WHYQDAAPG--------------FGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQG 743
+ E + + L + +G V
Sbjct: 123 IAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 182
Query: 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781
K A +++T L +GD +D + E
Sbjct: 183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLE 220
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 46.9 bits (110), Expect = 4e-06
Identities = 33/227 (14%), Positives = 66/227 (29%), Gaps = 31/227 (13%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
+ I D DGT + +P + +EL + SG L + ++
Sbjct: 3 KVIVTDMDGTFLNDAKTYNQPR--FMAQYQELK-KRGIKFVVASGNQYYQLISFFPELKD 59
Query: 640 LG---------------------IAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMK 678
+ + + + + VA + ++E +
Sbjct: 60 EISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE 119
Query: 679 LYTEATDGSYIEKKETALVWHYQDAAPGFGSC----QAKELLDHLESVLANEPVVVKRGY 734
+ Y K D F Q ++D L L V G+
Sbjct: 120 AFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF 179
Query: 735 NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781
+++ G+ K A + + P V+ +GD +D +M +
Sbjct: 180 GFIDLIIPGLHK---ANGISRLLKRWDLSPQNVVAIGDSGNDAEMLK 223
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 46.5 bits (109), Expect = 6e-06
Identities = 40/229 (17%), Positives = 68/229 (29%), Gaps = 35/229 (15%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC-- 637
R D DGT++ + I + R I L SGR VS
Sbjct: 3 RVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-----KCYVVFASGRMLVSTLNVEKKYFK 57
Query: 638 ENLGIAAEHGYYLRWTKKSEWETSTVAADFEWK---RITEPVMKLYTEATDGSYIEKKET 694
A +G + ++ + + I + D Y EK
Sbjct: 58 RTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNE 117
Query: 695 ALVWHYQDAAPGFGS------------------CQAKELLDHLESVLANEP----VVVKR 732
+ + + + + E LD L+ +L+ V K
Sbjct: 118 EIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKS 177
Query: 733 GYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781
+E+ P+ V KG + M + ++ GD+ +D MFE
Sbjct: 178 FPTYLEIVPKNVDKGKALRFLRERMNWK---KEEIVVFGDNENDLFMFE 223
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 46.5 bits (109), Expect = 6e-06
Identities = 32/233 (13%), Positives = 66/233 (28%), Gaps = 38/233 (16%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP--- 636
+ I +D DGT++ I ++ I R + +GR + +L
Sbjct: 5 KLIAIDMDGTLLLPDHTISPAVKNAIAAARA----RGVNVVLTTGRPYAGVHNYLKELHM 60
Query: 637 -CENLGIAAEHGYYLRWTKKSE------------WETSTVAADFEWKRITEPVMKLYTEA 683
+G ++ ++ + LYT
Sbjct: 61 EQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTAN 120
Query: 684 TDGSYI---------------EKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPV 728
D SY E ++ + + + + + +
Sbjct: 121 RDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180
Query: 729 VVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781
V+K +E+ + V KG + G P+ ++ +GD +D M E
Sbjct: 181 VLKSAPYFLEILDKRVNKGTGVKS---LADVLGIKPEEIMAIGDQENDIAMIE 230
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 36/202 (17%), Positives = 65/202 (32%), Gaps = 19/202 (9%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
+AI +D DGT+ + +I + + + I +V+G
Sbjct: 3 KAISIDIDGTITYPNRMIHEKALEAIRRAES----LGIPIMLVTGNTVQFAEAASILI-- 56
Query: 640 LGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWH 699
G + + + +A+ E + + K + A + + LV
Sbjct: 57 -GTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM 115
Query: 700 YQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMIS 759
+ E + + + L V V G+ I VK + KG +
Sbjct: 116 RETINV--------ETVREIINELNLNLVAVDSGFAI-HVKKPWINKG---SGIEKASEF 163
Query: 760 DGKLPDFVLCVGDDRSDEDMFE 781
G P V VGD +D D F+
Sbjct: 164 LGIKPKEVAHVGDGENDLDAFK 185
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.8 bits (107), Expect = 1e-05
Identities = 35/244 (14%), Positives = 69/244 (28%), Gaps = 40/244 (16%)
Query: 572 DAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS-- 629
+A K + + +D+DGT+ K + I ++E + I +GR KV
Sbjct: 3 EALKGADIKLLLIDFDGTLFVDKD--IKVPSENIDAIKEAI-EKGYMVSICTGRSKVGIL 59
Query: 630 -----LGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADF-----EWKRITEPVMKL 679
+ +G + T+ D + V +
Sbjct: 60 SAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVNQT 119
Query: 680 YTEATDGSYIEKKETALVWHYQDAAPGFG----------------------SCQAKELLD 717
+ +Y+ + + + + ++K ++
Sbjct: 120 IFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIG 179
Query: 718 HLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDE 777
+L+ N+ + EV G K +L D VL VGD +D
Sbjct: 180 NLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNIS---NDQVLVVGDAENDI 236
Query: 778 DMFE 781
M
Sbjct: 237 AMLS 240
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.3 bits (103), Expect = 3e-05
Identities = 34/228 (14%), Positives = 55/228 (24%), Gaps = 36/228 (15%)
Query: 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLA--- 635
D DGT+ I K D + LR+ +V G + E L
Sbjct: 3 PALCLFDVDGTLTAPRQKITKEMDDFLQKLRQ-----KIKIGVVGGSDFEKVQEQLGNDV 57
Query: 636 PCENLGIAAEHGYYLRWTKKSEWETSTVAADFE------WKRITEPVMKLYTEATDGSYI 689
+ + E+G K + + E + K+ G++I
Sbjct: 58 VEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFI 117
Query: 690 EKKETALVWHYQDAAPGFGSCQAKELLDH------------LESVLANEPVVVKRGYNIV 737
E + L + LD + G
Sbjct: 118 EFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISF 177
Query: 738 EVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRS----DEDMFE 781
+V P G K V + GD D ++F
Sbjct: 178 DVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFT 219
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 42.2 bits (98), Expect = 2e-04
Identities = 29/252 (11%), Positives = 61/252 (24%), Gaps = 57/252 (22%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
+ I +D DGT++ + + + + + + +GR + P
Sbjct: 2 KLIAIDLDGTLLNSKHQVSLENENALRQAQR----DGIEVVVSTGRAHFDVMSIFEPLGI 57
Query: 640 LGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMK------------LYTEATDGS 687
+ + I + +YT
Sbjct: 58 KTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRE 117
Query: 688 YIEK---------KETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPV---------- 728
++ E L Q A + + E A+EP+
Sbjct: 118 LLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSF 177
Query: 729 -------------------VVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLC 769
+V + E+ + +KG + + +
Sbjct: 178 FKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKG---QALKRLAKQLNIPLEETAA 234
Query: 770 VGDDRSDEDMFE 781
VGD +D+ M E
Sbjct: 235 VGDSLNDKSMLE 246
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 39.9 bits (92), Expect = 7e-04
Identities = 32/226 (14%), Positives = 65/226 (28%), Gaps = 32/226 (14%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS---LGEWLAP 636
+A+F D DGT+V + I L FI +GR K L E
Sbjct: 2 KALFFDIDGTLVSFET--HRIPSSTIEALEAAH-AKGLKIFIATGRPKAIINNLSELQDR 58
Query: 637 CENLGIAAEHGYYLRWTKKSEWETSTVAADFE--WKRITEPVMKLYTEATDGSYIEKKET 694
G +G Y ++ ++++ + + + + + +
Sbjct: 59 NLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNE 118
Query: 695 ALVWHYQDAAPG-------------------FGSCQAKELLDHLESVLANEPVVVKRGYN 735
+ + D +E + L S+ E +
Sbjct: 119 MVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEI--GRWYPA 176
Query: 736 IVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781
+V +G TK ++++ + + GD +D M
Sbjct: 177 FADVTAKGDTKQKGIDEIIRHFGIK---LEETMSFGDGGNDISMLR 219
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 38.1 bits (87), Expect = 0.003
Identities = 31/219 (14%), Positives = 58/219 (26%), Gaps = 25/219 (11%)
Query: 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN 639
R IFLD D T++P + P++ +I L++ S + + + E
Sbjct: 3 RLIFLDIDKTLIPGY--EPDPAKPIIEELKD----MGFEIIFNSSKTRAEQEYYRKELEV 56
Query: 640 LGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYT-----EATDGSYIEKKET 694
+ K + + + E +++ + + Y K
Sbjct: 57 ETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYG 116
Query: 695 ALVWHYQDAAPGFGSCQAKELLDHLESVLANEPV------------VVKRGYNIVEVKPQ 742
+ G ++ S E +
Sbjct: 117 NSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHG 176
Query: 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781
KG A+ +L VGD +D MFE
Sbjct: 177 NSDKGKAAKILLDFY--KRLGQIESYAVGDSYNDFPMFE 213
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 35.6 bits (82), Expect = 0.004
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 582 IFLDYDGTVVPH-HALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENL 640
I +D+DGT+V H + I + + L+ L + + S R L E + C
Sbjct: 3 IAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQ-QEKHRLILWSVREGELLDEAIEWCRAR 61
Query: 641 GI 642
G+
Sbjct: 62 GL 63
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 832 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.97 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.94 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.93 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.93 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.93 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.93 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.91 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.91 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.9 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.89 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.89 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.88 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.87 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.87 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.83 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.83 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.78 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.76 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.6 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.37 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.03 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.99 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.66 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.64 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.61 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.54 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.36 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.96 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 97.94 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.91 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.86 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.86 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.82 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.64 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.57 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.56 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 97.55 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.33 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.16 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.14 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.67 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 94.99 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 94.17 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.8 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 93.61 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 93.26 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.91 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 92.9 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 92.83 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 92.49 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 92.3 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 91.97 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 91.76 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 91.6 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 90.5 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 89.99 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 88.68 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 88.12 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 86.72 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 86.52 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 80.95 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 80.95 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.9e-99 Score=863.52 Aligned_cols=453 Identities=28% Similarity=0.522 Sum_probs=417.6
Q ss_pred CeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEecC
Q 045882 59 KKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFLS 138 (832)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 138 (832)
+||||||||+|+...+. .++|||+++|.+.+. +.+++||||+|.+.++++ .+......+|+|+||+|+
T Consensus 1 srlivvsnr~~~~~~~~---------~~~gGl~~al~~~~~-~~~g~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~v~l~ 68 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHA---------ASAGGLAVGILGALK-AAGGLWFGWSGETGNEDQ--PLKKVKKGNITWASFNLS 68 (456)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEESCCSS--CCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCC---------CCCccHHHHhHHHHh-hCCCEEEecCCCCCcccc--hhhhhhccCceeEEecCC
Confidence 48999999999987653 346899999977554 579999999986544321 222334678999999999
Q ss_pred HHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHh
Q 045882 139 SDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRR 218 (832)
Q Consensus 139 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~ 218 (832)
++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|.+.++++ |+||||||||+++|.+||+
T Consensus 69 ~~~~~~~Y~gf~n~~LWpl~H~~~~~-----~~~~~~~~~~Y~~vN~~fA~~l~~~~~~~-d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 69 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQDD-DIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCTT-CEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccCcccc-----ccccHHHHHHHHHHHHHHHHHHHHhccCC-CeEEEeccchhhhHHHHHH
Confidence 99999999999999999999999876 47999999999999999999999999984 9999999999999999999
Q ss_pred hcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEE
Q 045882 219 RFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIY 298 (832)
Q Consensus 219 ~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~ 298 (832)
+.|+++||||+|+|||++++||++|++++|+++||++|+||||+++|++||+++|.++++....... .+.+.|+.++
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~v~ 219 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAFR 219 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC---eEEecCceee
Confidence 9999999999999999999999999999999999999999999999999999999999998765543 5788999999
Q ss_pred EEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecC
Q 045882 299 VKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNP 378 (832)
Q Consensus 299 i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (832)
+.++|+|||+..|......+ ..+.+.+++++++|+++|++|||+|+.||+..+|+||++||++||+++++++|+|++.|
T Consensus 220 v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~ 298 (456)
T d1uqta_ 220 TEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 298 (456)
T ss_dssp EEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred eeeecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCC
Confidence 99999999999998766544 44567788999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCC
Q 045882 379 ARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTP 458 (832)
Q Consensus 379 ~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~ 458 (832)
++++.++|.+++.++.+++++||++|+..+|.|++++.+.++++++.++|+.||||++||++||||||++|||||+.+
T Consensus 299 ~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p-- 376 (456)
T d1uqta_ 299 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 376 (456)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred CchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 459 KMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
.++|+||+|+++|+++++.+|++|||||++++|+||.+||+||++||++|+++++++|.+||+.+|++
T Consensus 377 ------------~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~ 444 (456)
T d1uqta_ 377 ------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQE 444 (456)
T ss_dssp ------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 25789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 045882 539 SFMQDLERA 547 (832)
Q Consensus 539 ~~l~~l~~~ 547 (832)
+||.+|+++
T Consensus 445 ~fl~~l~~~ 453 (456)
T d1uqta_ 445 CFISDLKQI 453 (456)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhh
Confidence 999999874
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.97 E-value=8.6e-31 Score=267.31 Aligned_cols=220 Identities=22% Similarity=0.310 Sum_probs=183.0
Q ss_pred EEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccE
Q 045882 581 AIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEW 658 (832)
Q Consensus 581 lI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w 658 (832)
|||||+||||+++.. ..+.++++++++|++|. + ++.|+|+|||+...+...+. +..+++++||+.+...+...+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~-~-~~~v~i~TGR~~~~l~~~~~--~~~~~~~~ng~~~~~~~~~~~ 77 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLK-E-RFDTYIVTGRSPEEISRFLP--LDINMICYHGACSKINGQIVY 77 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHH-H-HSEEEEECSSCHHHHHHHSC--SSCEEEEGGGTEEEETTEEEE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHh-h-CCCEEEEcCCCHHHhhhhcC--ccccEEecCeEEEecCCceee
Confidence 899999999997532 35679999999999994 4 67899999999999987764 356899999999988765444
Q ss_pred EEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEE
Q 045882 659 ETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVE 738 (832)
Q Consensus 659 ~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vE 738 (832)
. ........|.+.+.+.+..+....++...+.+.....+++....+. ...+..+.++..+...++.+.++..++|
T Consensus 78 ~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~id 152 (229)
T d1u02a_ 78 N-NGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIE 152 (229)
T ss_dssp C-TTGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCST----THHHHHHHHHHHHHHHTCEEEECSSEEE
T ss_pred e-cchhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhh----hHHHHHHHHHHHhhcCCeEEEeeceEEE
Confidence 3 3334455667777777777888899999999999999998865443 3456667777777777788899999999
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCChh
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEE 818 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~ 818 (832)
|.|+|+|||+|+++|+++ ++++|||||.||++||++++.+ |+|+||++++.|+|++++++
T Consensus 153 i~p~g~~Kg~al~~l~~~--------~~~i~~GDs~ND~~Mf~~~~~~------------~av~~g~~~~~A~~~~~~~~ 212 (229)
T d1u02a_ 153 LRVPGVNKGSAIRSVRGE--------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 212 (229)
T ss_dssp EECTTCCHHHHHHHHHTT--------SCEEEEESSHHHHHHHHTTTTS------------EEEEESSSCCCCSEEESSHH
T ss_pred EecCCCCHHHHHHHHhcc--------ccceeecCCCChHHHHhccCCe------------EEEEeCCCCccCeEEcCCHH
Confidence 999999999999999753 6799999999999999999876 89999999999999999999
Q ss_pred HHHHHHHHhhh
Q 045882 819 DVLALLKGLAA 829 (832)
Q Consensus 819 eV~~~L~~l~~ 829 (832)
||.++|+.|..
T Consensus 213 ev~~~l~~l~~ 223 (229)
T d1u02a_ 213 EMRKILKFIEM 223 (229)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887754
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=2e-26 Score=241.92 Aligned_cols=224 Identities=20% Similarity=0.281 Sum_probs=161.7
Q ss_pred cEEEEEecCCCcCCCCCCCCCC-CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKP-SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKS 656 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~-s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~ 656 (832)
+|+|++|+||||++ ..+.+ +++++++|++| ++.|+.|+++|||+...+.+++++++ ..++|++||+.++..+..
T Consensus 2 IKli~~DlDGTLl~---~~~~~~~~~~~~~l~~l-~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (269)
T d1rlma_ 2 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 77 (269)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred EEEEEEeCCccCcC---CCCcCChHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcE
Confidence 58999999999998 44554 47899999999 56799999999999999999998876 568999999999987654
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhcC---------CceEEeecce------------eE--EEEeccCCCC-------
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEAT---------DGSYIEKKET------------AL--VWHYQDAAPG------- 706 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~~---------~gs~ie~k~~------------~l--~~~~~~ad~~------- 706 (832)
.+..... .+....++..+.+.. ++.++..... .+ ...+...+..
T Consensus 78 ~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T d1rlma_ 78 LFHGELT------RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 151 (269)
T ss_dssp EEECCCC------HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEeccc------hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEec
Confidence 4433222 223333333333221 2222221100 00 0001111110
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 707 FGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 707 ~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
....+..++.+++...+......+.++..++||.|+++|||.|+++|++++ |+++++|++||||.||++||+.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~l---gi~~~~vi~~GD~~ND~~Ml~~ag~- 227 (269)
T d1rlma_ 152 LPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMARY- 227 (269)
T ss_dssp CCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE-
T ss_pred CCHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhh---ccccccEEEEcCCcchHHHHHhCCe-
Confidence 012345667777766665555566778999999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhhh
Q 045882 787 TYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLAA 829 (832)
Q Consensus 787 ~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~ 829 (832)
+|+||++ +..|+|++.+ .++|++.|++|.+
T Consensus 228 -------------~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~ 263 (269)
T d1rlma_ 228 -------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLD 263 (269)
T ss_dssp -------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred -------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence 6777764 6789999864 5679999998875
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=3.8e-25 Score=233.81 Aligned_cols=222 Identities=17% Similarity=0.165 Sum_probs=155.7
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE 657 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~ 657 (832)
.|+|++|+||||++ .++.++++++++|++| +++|+.|+++|||+...+.+.+.+++ ..++|++||+.+++.++..
T Consensus 1 iKli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CeEEEEECCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 47999999999998 6788999999999999 57899999999999999999998876 5689999999999876554
Q ss_pred EEE-cCcccchhHHHHHHHHHHHHHhcCCceEEeecceeE---------------------------------------E
Q 045882 658 WET-STVAADFEWKRITEPVMKLYTEATDGSYIEKKETAL---------------------------------------V 697 (832)
Q Consensus 658 w~~-~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l---------------------------------------~ 697 (832)
+.. .++ .+.+.++++.+.+......+....... .
T Consensus 77 i~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (285)
T d1nrwa_ 77 YHHETID------KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSG 150 (285)
T ss_dssp EEECCCC------HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCC
T ss_pred eeeccCC------HHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhcccc
Confidence 433 222 344555555544322111111110000 0
Q ss_pred EEe----cc---CC-CCC------CchhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCC
Q 045882 698 WHY----QD---AA-PGF------GSCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGK 762 (832)
Q Consensus 698 ~~~----~~---ad-~~~------~~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi 762 (832)
+.+ .. .+ +.. .......+...+........+. +.++..++||.|+++|||.|++++++++ |+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~---gi 227 (285)
T d1nrwa_ 151 FAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---NI 227 (285)
T ss_dssp EEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---TC
T ss_pred ceeechHHHHhhcccchhheeeecccchHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhc---cc
Confidence 000 00 00 000 0001122222222222223354 4467899999999999999999999999 99
Q ss_pred CcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHh
Q 045882 763 LPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGL 827 (832)
Q Consensus 763 ~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l 827 (832)
++++|++|||+.||++||+.++ ++|+|+++ +..|+|++.+ .++|.++|++|
T Consensus 228 ~~~~vi~~GD~~ND~~Ml~~a~--------------~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 228 PLEETAAVGDSLNDKSMLEAAG--------------KGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp CGGGEEEEESSGGGHHHHHHSS--------------EEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred CcccEEEEeCCHHHHHHHHhCC--------------eEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 9999999999999999999998 46777775 5789999864 56899999886
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=5.7e-26 Score=238.56 Aligned_cols=227 Identities=16% Similarity=0.195 Sum_probs=155.0
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC----CCceEEEeCCEEEEe
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC----ENLGIAAEHGYYLRW 652 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l----~~l~liaenGa~i~~ 652 (832)
..+|||++|+||||++ .++.+++++.++|++| +++|+.|+|+|||+...+.+++..+ +..+++++||+.++.
T Consensus 2 ~~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L-~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~ 77 (271)
T d1rkqa_ 2 LAIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQK 77 (271)
T ss_dssp CCCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEE
T ss_pred CCeeEEEEeCCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEec
Confidence 3589999999999998 6788999999999999 5789999999999999999888764 346699999999987
Q ss_pred CCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeeccee---------------------EEEE-eccCCCC--C-
Q 045882 653 TKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETA---------------------LVWH-YQDAAPG--F- 707 (832)
Q Consensus 653 ~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~---------------------l~~~-~~~ad~~--~- 707 (832)
..+........ .+. +.+..+.+...+.....+....... ..+. ....++. +
T Consensus 78 ~~~~~~i~~~~-~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (271)
T d1rkqa_ 78 AADGSTVAQTA-LSY---DDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFL 153 (271)
T ss_dssp TTTCCEEEECC-BCH---HHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBC
T ss_pred cCCCeEEEeec-ccH---HHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceE
Confidence 65544332221 122 2233333322221111111111100 0000 0000000 0
Q ss_pred ------CchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHH
Q 045882 708 ------GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781 (832)
Q Consensus 708 ------~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~ 781 (832)
.....++..+.+.+.+.+....+..++.++||.|+++|||.|+++|++++ +++.++++||||+.||++||+
T Consensus 154 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~---~i~~~~ii~~GD~~ND~~ml~ 230 (271)
T d1rkqa_ 154 KVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIE 230 (271)
T ss_dssp EEEEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEecCHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhc---ccchhcEEEEeCcHhHHHHHH
Confidence 01122333333333333223446788999999999999999999999999 999999999999999999999
Q ss_pred HcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhh
Q 045882 782 SISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLA 828 (832)
Q Consensus 782 ~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~ 828 (832)
.+++ +++||++ +..|+|++.+ .++|++.|+++.
T Consensus 231 ~~~~--------------~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 231 YAGV--------------GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 269 (271)
T ss_dssp HSSE--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred hCCc--------------EEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence 9985 6677775 4789999854 577999998864
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=1.3e-25 Score=236.10 Aligned_cols=221 Identities=16% Similarity=0.138 Sum_probs=159.4
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC--CCceEEEeCCEEEEeCCCc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC--ENLGIAAEHGYYLRWTKKS 656 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~~l~liaenGa~i~~~~~~ 656 (832)
.|+|++|+||||++ .++.++++++++|++| ++ ++.++++|||+...+.+.+.++ ...++|++||+.|+.+++.
T Consensus 2 ~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l-~~-~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~ 76 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEKL-SR-KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG 76 (267)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-TT-TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred eEEEEEeCCccccC---CcCccCHHHHHHHHHH-Hc-CCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccc
Confidence 47999999999998 6788999999999999 44 5689999999999988888663 2457999999999987665
Q ss_pred cEEE-cCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEE---------------eccCCCCC-------------
Q 045882 657 EWET-STVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWH---------------YQDAAPGF------------- 707 (832)
Q Consensus 657 ~w~~-~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~---------------~~~ad~~~------------- 707 (832)
.... .++ .+.+..+++...+......+...+...... ++. .+.+
T Consensus 77 ~i~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 149 (267)
T d1nf2a_ 77 VILNEKIP------PEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRV-EPNLSELVSKMGTTKLL 149 (267)
T ss_dssp EEEECCBC------HHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEE-CTTHHHHHHHHCBSEEE
T ss_pred cccccCCC------HHHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCcee-cCcHHHHhhhccceEEE
Confidence 4322 222 344555555554432222211111110000 000 0000
Q ss_pred ---CchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcc
Q 045882 708 ---GSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 708 ---~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
...+.+++.+.+.+.+.+....+.++..++||.|+++|||.|+++|++++ |++++++++|||+.||++||+.++
T Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~---~i~~~~vva~GD~~ND~~ml~~~~ 226 (267)
T d1nf2a_ 150 LIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAG 226 (267)
T ss_dssp EECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCS
T ss_pred EeccHHHHHHHHHHHHHhhCCcEEEEEeecceeeecCCCCchhHHHHHHHHhh---ccCcccEEEEcCCcchHHHHHhCC
Confidence 01234556666666665544446788999999999999999999999999 999999999999999999999998
Q ss_pred cccCCCCCCCCCcEEEEEeCCc----ccccceEeC--ChhHHHHHHHHhh
Q 045882 785 QATYGSSLPIAPEIFACTVGQK----PSKARYYLD--DEEDVLALLKGLA 828 (832)
Q Consensus 785 ~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 828 (832)
++|+||++ +..|+|++. +.++|+.+|++|.
T Consensus 227 --------------~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll 262 (267)
T d1nf2a_ 227 --------------LRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (267)
T ss_dssp --------------EEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred --------------cEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHH
Confidence 46788875 578899986 5678999998875
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.93 E-value=5.4e-25 Score=230.31 Aligned_cols=221 Identities=18% Similarity=0.243 Sum_probs=150.4
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHh---cCCCCceEEEeCCEEEEeCCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWL---APCENLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~---~~l~~l~liaenGa~i~~~~~ 655 (832)
.|+||||+||||+++ ....++++++++|++| ++.|+.|+++|||++..+...+ ......++|++||+.++.+++
T Consensus 1 ~k~if~DlDGTL~~~--~~~~i~~~~~~al~~l-~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 1 TKALFFDIDGTLVSF--ETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp CCEEEECSBTTTBCT--TTSSCCHHHHHHHHHH-HHTTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred CeEEEEECCCCCcCC--CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcc
Confidence 379999999999973 2467899999999999 6889999999999988775432 222356899999999999766
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhcCCceEE-eecceeEEEE-------ecc---C--CCCCC----------c---
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEATDGSYI-EKKETALVWH-------YQD---A--APGFG----------S--- 709 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~i-e~k~~~l~~~-------~~~---a--d~~~~----------~--- 709 (832)
..+...++. +.++.+++.+.+......+ .......... +.. . .+... .
T Consensus 78 ~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
T d2rbka1 78 VIYKSAIPQ------EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTP 151 (260)
T ss_dssp EEEECCCCH------HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEE
T ss_pred cccccCCCH------HHHHHHHHHHHHcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEee
Confidence 556554432 3344555544333222222 1111111000 000 0 00000 0
Q ss_pred hhHHHHHHHHHHHhcCCC-EEE-EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccccc
Q 045882 710 CQAKELLDHLESVLANEP-VVV-KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQAT 787 (832)
Q Consensus 710 ~~a~el~~~l~~~l~~~~-~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~ 787 (832)
....+.. .++++..+ ..+ .++..++||.|+++|||.|+++|++++ |++++++++|||+.||++||+.+++
T Consensus 152 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~---~i~~~~~~a~GD~~ND~~Ml~~a~~-- 223 (260)
T d2rbka1 152 FITEEEE---KEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI-- 223 (260)
T ss_dssp CCCHHHH---HHHGGGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--
T ss_pred cCCHHHH---HHHHHHhccccceeecCcEEEEEeCCCCHHHHHHHHHHhc---cccHhheeEecCCcccHHHHHhCCe--
Confidence 0001111 22333322 333 356789999999999999999999999 9999999999999999999999985
Q ss_pred CCCCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHHHHhh
Q 045882 788 YGSSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALLKGLA 828 (832)
Q Consensus 788 ~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L~~l~ 828 (832)
+|+||++ +..|+|++.+ .++|+++|+++.
T Consensus 224 ------------svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~~ 258 (260)
T d2rbka1 224 ------------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHFG 258 (260)
T ss_dssp ------------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHHT
T ss_pred ------------EEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHhC
Confidence 6778875 5788998864 678999998863
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.91 E-value=9e-24 Score=222.30 Aligned_cols=234 Identities=19% Similarity=0.185 Sum_probs=165.9
Q ss_pred HHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC-------CCceEE
Q 045882 571 VDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC-------ENLGIA 643 (832)
Q Consensus 571 ~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-------~~l~li 643 (832)
.++++.++.|+|++|+||||+.. .++.++++++++|++| +++|+.|+|+|||++..+.+.++.+ ...+.|
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i 78 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGV 78 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEE
T ss_pred cccCcccCccEEEEECCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceE
Confidence 46788999999999999999852 4578999999999999 5789999999999999998887653 235589
Q ss_pred EeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCC--ceEEeecceeEE---------------------EEe
Q 045882 644 AEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATD--GSYIEKKETALV---------------------WHY 700 (832)
Q Consensus 644 aenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~--gs~ie~k~~~l~---------------------~~~ 700 (832)
+.||+.++...+....... .+ ......+++.+..... ..+....+.... ...
T Consensus 79 ~~~g~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (283)
T d2b30a1 79 YINGTIVYDQIGYTLLDET--IE---TDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRH 153 (283)
T ss_dssp EGGGTEEECTTCCEEEECC--CC---HHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECH
T ss_pred EEeeeEEEcCCCcEeeecc--cC---HHHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccH
Confidence 9999999887655433221 11 2334444444433211 122221111110 000
Q ss_pred ccC-C-CC-------CCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEe
Q 045882 701 QDA-A-PG-------FGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVG 771 (832)
Q Consensus 701 ~~a-d-~~-------~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~G 771 (832)
.+. + .. ....+.+++...+...+......+.++..++||.|+++|||.|++.+++++ +++.+++++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~---~i~~~~vi~~G 230 (283)
T d2b30a1 154 NEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVG 230 (283)
T ss_dssp HHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEE
T ss_pred HHHhhcccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhc---ccccceEEEec
Confidence 000 0 00 001235677777777665544556778899999999999999999999999 99999999999
Q ss_pred CChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCC---hhHHHHHHHHhhh
Q 045882 772 DDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDD---EEDVLALLKGLAA 829 (832)
Q Consensus 772 Dd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~---~~eV~~~L~~l~~ 829 (832)
|+.||++||+.+++ +|+||++ +..|+|++.. .++|..+|+++.+
T Consensus 231 D~~ND~~Ml~~a~~--------------~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~ 281 (283)
T d2b30a1 231 DAENDIAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD 281 (283)
T ss_dssp CSGGGHHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred CChhhHHHHHhCCc--------------EEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHc
Confidence 99999999999985 6777775 5778899853 2358999998875
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.91 E-value=2.6e-24 Score=219.18 Aligned_cols=218 Identities=21% Similarity=0.243 Sum_probs=153.8
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCc
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKS 656 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~ 656 (832)
|.|+|+||+||||++ .++.+++++.++|++| ++.|+.|+++|||+...+...+..+. ..+++++||+.+......
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l-~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CceEEEEecCCCCcC---CCCccCHHHHHHHHHH-HhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccc
Confidence 578999999999998 6788999999999999 67899999999999999988876544 567999999999887655
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeE
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNI 736 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~ 736 (832)
.+.... ...| .....+...+...........+...+.+. . ........+++.++ + ...+....+...
T Consensus 77 ~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~----~-~~~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFLASM---DEEW-ILWNEIRKRFPNARTSYTMPDRRAGLVIM-R---ETINVETVREIINE----L-NLNLVAVDSGFA 143 (230)
T ss_dssp EESCCC---SHHH-HHHHHHHHHCTTCCBCTTGGGCSSCEEEC-T---TTSCHHHHHHHHHH----T-TCSCEEEECSSC
T ss_pred cccccc---cHHH-HHHHHHHHhcccccceeecccceeeEEEe-c---ccccHHHHHHHHHH----h-ccceEEeeCCcE
Confidence 443222 1121 11222222222211111112222233221 1 11111112233222 2 223556778899
Q ss_pred EEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccce
Q 045882 737 VEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARY 812 (832)
Q Consensus 737 vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y 812 (832)
+||+|.+++|+.+++.+++++ |++++++++|||+.||++||+.++ ++|+||++ +..|+|
T Consensus 144 iei~~~~~~K~~al~~l~~~~---~i~~~~~~~iGD~~NDi~ml~~ag--------------~~vav~na~~~~k~~A~~ 206 (230)
T d1wr8a_ 144 IHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVG--------------YKVAVAQAPKILKENADY 206 (230)
T ss_dssp EEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSS--------------EEEECTTSCHHHHTTCSE
T ss_pred EEEeeCCcCcchhhccccccc---ccchhheeeeecCccHHHHHHHCC--------------eEEEECCCCHHHHHhCCE
Confidence 999999999999999999999 999999999999999999999998 46778875 577999
Q ss_pred EeCC--hhHHHHHHHHhhh
Q 045882 813 YLDD--EEDVLALLKGLAA 829 (832)
Q Consensus 813 ~l~~--~~eV~~~L~~l~~ 829 (832)
++++ .++|++.|..+..
T Consensus 207 v~~~~~~~gv~~~i~~~l~ 225 (230)
T d1wr8a_ 207 VTKKEYGEGGAEAIYHILE 225 (230)
T ss_dssp ECSSCHHHHHHHHHHHHHH
T ss_pred EECCCCcCHHHHHHHHHHH
Confidence 9964 4678888887654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.90 E-value=1.2e-23 Score=215.00 Aligned_cols=212 Identities=16% Similarity=0.089 Sum_probs=153.7
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE 657 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~ 657 (832)
.|+|+||+||||++ ....+++++.++|++| ++.|+.|+++|||+...+......++ ..+++++||+.++.+....
T Consensus 3 iKli~~D~DGTL~~---~~~~i~~~~~~al~~l-~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~ 78 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSI 78 (225)
T ss_dssp CCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCE
T ss_pred eEEEEEecCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccE
Confidence 58999999999998 6788999999999999 57899999999999988777665444 4679999999998877655
Q ss_pred EEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecc-eeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeE
Q 045882 658 WETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKE-TALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNI 736 (832)
Q Consensus 658 w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~-~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~ 736 (832)
+..... +.+...++...++..-..+.... ....+.+. .++ +..+.+..........+..+...
T Consensus 79 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~i~~~~~~ 142 (225)
T d1l6ra_ 79 KKFFSN-------EGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDP--------EDVDYVRKEAESRGFVIFYSGYS 142 (225)
T ss_dssp EESSCS-------HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCG--------GGHHHHHHHHHTTTEEEEEETTE
T ss_pred EEecCh-------HHHHHHHHHHHHhcCcceeecccceeeeeccc-cCH--------HHHHHHHHHHhhcCcEEEECCcE
Confidence 543211 23344444443332111111100 00011111 111 11223333344456778888899
Q ss_pred EEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccce
Q 045882 737 VEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARY 812 (832)
Q Consensus 737 vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y 812 (832)
+||.|+++|||.|+++|++++ |+++++|++||||.||++||+.++ ++|+||++ +..|+|
T Consensus 143 ~~i~~~~~~K~~ai~~l~~~~---~i~~~~v~~~GDs~nD~~m~~~a~--------------~~vav~na~~~~k~~ad~ 205 (225)
T d1l6ra_ 143 WHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPV--------------RKACPANATDNIKAVSDF 205 (225)
T ss_dssp EEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSS--------------EEEECTTSCHHHHHHCSE
T ss_pred EEecCCccchHHHHHHHhhhh---ccchhheeeecCCcchHHHHHHCC--------------eEEEECCCcHHHHHhCCE
Confidence 999999999999999999999 999999999999999999999998 46778764 578999
Q ss_pred EeC--ChhHHHHHHHHh
Q 045882 813 YLD--DEEDVLALLKGL 827 (832)
Q Consensus 813 ~l~--~~~eV~~~L~~l 827 (832)
++. +.++|.++|+++
T Consensus 206 v~~~~~~~gi~~~l~~~ 222 (225)
T d1l6ra_ 206 VSDYSYGEEIGQIFKHF 222 (225)
T ss_dssp ECSCCTTHHHHHHHHHT
T ss_pred EECCCCcCHHHHHHHHh
Confidence 884 568899999876
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.89 E-value=3.7e-22 Score=222.44 Aligned_cols=289 Identities=16% Similarity=0.167 Sum_probs=213.2
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCCh---hhhh------cCC--chHHHHHHHHhCCEEeecChhhHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS---EIYR------TLP--VRNEILKALLNADLIGFHTFDYAR 267 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~---e~~r------~lp--~r~~il~~ll~~dligf~t~~~~~ 267 (832)
.|+|++|+++..+++.++++.. ++++.+.+|..++.. ..+. ... ...........+|.+...+..++.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~~~-~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~ 199 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKKYF-KIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 199 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHHHH-CCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEECChhhhhHhhhhhccc-cCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhh
Confidence 3899999999988877776654 789999999887632 1111 111 122334456778999887766554
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--CCCEEEEEeccccc
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKVIVGVDDMDI 345 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~VdRld~ 345 (832)
.... .++.. ..++.++|+|+|++.|.+....+........+++++ .++++|+++||++.
T Consensus 200 ~~~~----~~~~~---------------~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 260 (437)
T d2bisa1 200 DEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR 260 (437)
T ss_dssp HTHH----HHGGG---------------TTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCS
T ss_pred hhhh----hhccc---------------cCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccc
Confidence 3321 11111 114567899999999887666555556666677776 46789999999975
Q ss_pred -cCCHHHHHHHHHHHHHh--CCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHH
Q 045882 346 -FKGISLKLLAMEQLLKV--HPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLH 422 (832)
Q Consensus 346 -~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~ 422 (832)
.||+..+++|++.+..+ +|+++ |+.+|... +.++... +.+.. ..+ .++++.+.++.+
T Consensus 261 ~~Kg~~~ll~a~~~~~~~~~~~~~~----lvi~G~~~----~~~~~~~---~~~~~----~~~-----~~~~~~~~~~~~ 320 (437)
T d2bisa1 261 GQKGVDVLLKAIEILSSKKEFQEMR----FIIIGKGD----PELEGWA---RSLEE----KHG-----NVKVITEMLSRE 320 (437)
T ss_dssp SSSCHHHHHHHHHHHTTSGGGGGEE----EEEECCBC----HHHHHHH---HHHHH----TCT-----TEEEECSCCCHH
T ss_pred cchhHHHHHhhhcccccccccccce----eeeecccc----cccccch---hhhcc----ccc-----cceeccccCcHH
Confidence 79999999999988653 35544 88887321 2222222 22211 122 356778889999
Q ss_pred HHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC--CceEeCCCCHH
Q 045882 423 EKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS--GAIRVNPWDID 500 (832)
Q Consensus 423 el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--~a~~VnP~d~~ 500 (832)
++..+|+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+. .|++|+|.|++
T Consensus 321 ~~~~~~~~adi~v~~s~~e~~~~~~~Eama~-------------------G~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~ 381 (437)
T d2bisa1 321 FVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------------------GAIPIASAVGGLRDIITNETGILVKAGDPG 381 (437)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHHHHHHHTT-------------------TCEEEEESCTTHHHHCCTTTCEEECTTCHH
T ss_pred HHHHHHhhhccccccccccccchHHHHHHHC-------------------CCCEEEeCCCCcHHhEECCcEEEECCCCHH
Confidence 9999999999999999999999999999999 45799999999888773 48999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHH
Q 045882 501 AVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (832)
++|++|.++|+++++.+++..++.+++++.+++..+++++++-.++
T Consensus 382 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~ 427 (437)
T d2bisa1 382 ELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTG 427 (437)
T ss_dssp HHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999877777777777788888889999999888775544
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.89 E-value=2.1e-22 Score=229.03 Aligned_cols=313 Identities=15% Similarity=0.152 Sum_probs=208.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHh---CCCCCEEEEeCcccccHHHHHH-hhcCCCeEEEEecCCCC----ChhhhhcCC---
Q 045882 175 LLWRAYVSANKVFADKIMEVI---NPEEDYVWIHDYHLMVLPTFLR-RRFHRVKLGFFLHSPFP----SSEIYRTLP--- 243 (832)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~~---~~~~d~vwvhDyhl~llp~~lr-~~~~~~~ig~flH~PfP----~~e~~r~lp--- 243 (832)
..|..|...++.+++.+.+.. +| |+|++||+|..+.+.+++ .+.+++++.+++|.... ....+..+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p--DIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRP--DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCC--SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccHHHHHHHHHHHHhhhhhcccCCCC--CEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 358888888888876655543 34 999999999999998886 45678999999996421 111221111
Q ss_pred ------------chHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHH
Q 045882 244 ------------VRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRL 311 (832)
Q Consensus 244 ------------~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~ 311 (832)
...-+..++..+|.+-.-+..|++..+..-. ..+.+.- ...+..++.++|+|+|.+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~vi~ngv~~~~~ 253 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGV---------IGSRAHVLHGIVNGIDADVW 253 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHH-HTTCHHH---------HHTTGGGEEECCCCBCTTTS
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhc-Ccchhhh---------hhhccccEEEEECCcchhhc
Confidence 0112344677899999888888876643210 0111100 00122356779999999887
Q ss_pred HhhcCC-----------CChHHHHHHHHHHc----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEe
Q 045882 312 ESALNH-----------PSSSIKVKEIREQF----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIV 376 (832)
Q Consensus 312 ~~~~~~-----------~~~~~~~~~l~~~~----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 376 (832)
.+.... .......+.++.++ +++++|+++||+++.||++.+++|+++++++++. |+.+|
T Consensus 254 ~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G 327 (477)
T d1rzua_ 254 NPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLG 327 (477)
T ss_dssp CTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEE
T ss_pred cccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEe
Confidence 542111 01122333444444 3568999999999999999999999999887543 55566
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecC
Q 045882 377 NPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQG 456 (832)
Q Consensus 377 ~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 456 (832)
.+ +.. ...++.++..+.+. .+.+. +..+.+++..+|+.||+||+||.+||||+|++|||+|
T Consensus 328 ~G---~~~----~~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~--- 388 (477)
T d1rzua_ 328 AG---DVA----LEGALLAAASRHHG--------RVGVA-IGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY--- 388 (477)
T ss_dssp CB---CHH----HHHHHHHHHHHTTT--------TEEEE-ESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH---
T ss_pred cC---Cch----HHHHHHHHHhhcCC--------eEEEE-cccChhHHHHHHHhCccccCCccccCCCHHHHHHHHc---
Confidence 32 222 22333344444322 24443 4678889999999999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCCCceEEeccCccccccCC------------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHH
Q 045882 457 TPKMDEAMELASVCPRTSMLVISEFIGCSPSLS------------GAIRVNPWDIDAVADALHDAITM--SDVEKQLRHE 522 (832)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~------------~a~~VnP~d~~~~A~ai~~aL~m--~~~e~~~r~~ 522 (832)
+.|+|+|..+|..+.+. +|++|+|.|++++|+||.++|+. .++.+++..+
T Consensus 389 ----------------G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~ 452 (477)
T d1rzua_ 389 ----------------GCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQK 452 (477)
T ss_dssp ----------------TCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ----------------CCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHH
Confidence 45899999999999872 47999999999999999999863 2333333222
Q ss_pred HHHhhhhcCCHHHHHHHHHH
Q 045882 523 KHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 523 ~~~~~v~~~~~~~W~~~~l~ 542 (832)
+.. -..+++..-++++++
T Consensus 453 ~a~--~~~fsw~~~a~~~~~ 470 (477)
T d1rzua_ 453 LGM--KSDVSWEKSAGLYAA 470 (477)
T ss_dssp HHH--TCCCBHHHHHHHHHH
T ss_pred HHH--HhhCCHHHHHHHHHH
Confidence 221 123665655665544
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.88 E-value=3.9e-23 Score=213.69 Aligned_cols=214 Identities=16% Similarity=0.169 Sum_probs=143.9
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEEEeCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYLRWTK 654 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i~~~~ 654 (832)
++.||++|+||||++ .++.| +.++++.++ +.+|+.|+|+|||+...+.+++..++ ..++|++||+.++...
T Consensus 2 ~~~li~~DlDGTL~~---~~~~~--~~~~~~~~~-~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~ 75 (244)
T d1s2oa1 2 RQLLLISDLDNTWVG---DQQAL--EHLQEYLGD-RRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPE 75 (244)
T ss_dssp CSEEEEECTBTTTBS---CHHHH--HHHHHHHHT-TGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETT
T ss_pred CceEEEEECcccCCC---CCCCH--HHHHHHHHH-HcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEcc
Confidence 678999999999998 33333 456667777 57799999999999999999887643 3468999999999875
Q ss_pred Ccc--EEEcCcccchhHHHHHHHHHHHHHhcCCceEEee----cceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC--
Q 045882 655 KSE--WETSTVAADFEWKRITEPVMKLYTEATDGSYIEK----KETALVWHYQDAAPGFGSCQAKELLDHLESVLANE-- 726 (832)
Q Consensus 655 ~~~--w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~----k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~-- 726 (832)
... |...+. ..| ...++..+.+..++..... ....+.+.+...... +..+.+...+...
T Consensus 76 ~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 142 (244)
T d1s2oa1 76 GLDQHWADYLS---EHW---QRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACP-------TVIDQLTEMLKETGI 142 (244)
T ss_dssp EECHHHHHHHH---TTC---CHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCT-------HHHHHHHHHHHTSSC
T ss_pred CcchHHHHHHH---HHH---hHHHHHHHHhhcccccccChhhhcceEEEEeccccccH-------HHHHHHHHHHHhhcc
Confidence 432 211110 011 1223333444444443332 233445544322111 2333444433332
Q ss_pred C-EEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC
Q 045882 727 P-VVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ 805 (832)
Q Consensus 727 ~-~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~ 805 (832)
. .....++.++||.|++++||.|+++|++.+ |++.+++++||||.||++||+.++ ++|+||+
T Consensus 143 ~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~---gi~~~~~v~~GD~~ND~~Ml~~~~--------------~~vav~n 205 (244)
T d1s2oa1 143 PVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSA--------------RGVIVRN 205 (244)
T ss_dssp CEEEEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSS--------------EEEECTT
T ss_pred cceeeecCCcEEEEEeCccchhHHHHHHHHhc---cCChhhEEEEcCCCCCHHHHhhCC--------------cEEEeCC
Confidence 2 335577889999999999999999999999 999999999999999999999998 4788887
Q ss_pred c----ccccc-------eEeC--ChhHHHHHHHHh
Q 045882 806 K----PSKAR-------YYLD--DEEDVLALLKGL 827 (832)
Q Consensus 806 ~----~s~A~-------y~l~--~~~eV~~~L~~l 827 (832)
+ +..|+ |... ..++|++.|+.+
T Consensus 206 a~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f 240 (244)
T d1s2oa1 206 AQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 240 (244)
T ss_dssp CCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred CCHHHHHHhhcccccceEEcCCCCccHHHHHHHHh
Confidence 4 33343 3332 356788877764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.87 E-value=3.4e-23 Score=212.81 Aligned_cols=209 Identities=19% Similarity=0.106 Sum_probs=137.2
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE 657 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~ 657 (832)
.|+||+|+||||++ ... ++++.++|++| ++.|+.|+++|||++..+..++..++ ..++|++||+.++..++..
T Consensus 2 iKli~~DlDGTLl~---~~~--~~~~~~ai~~l-~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 75 (243)
T d1wzca1 2 IRLIFLDIDKTLIP---GYE--PDPAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYF 75 (243)
T ss_dssp EEEEEECCBTTTBS---SSC--SGGGHHHHHHH-HHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTCC
T ss_pred cEEEEEeCCCCCCC---CCC--CHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCce
Confidence 58999999999997 333 46789999999 68899999999999999999998876 4579999999999876543
Q ss_pred EEEcCcccc---------hhHHHHHHHHHHHHHhc---CCceE-----------Ee--------ecceeEEEEeccCCCC
Q 045882 658 WETSTVAAD---------FEWKRITEPVMKLYTEA---TDGSY-----------IE--------KKETALVWHYQDAAPG 706 (832)
Q Consensus 658 w~~~~~~~~---------~~w~~~v~~i~~~~~e~---~~gs~-----------ie--------~k~~~l~~~~~~ad~~ 706 (832)
......... .. .+.+...+..+... ..... .. ........... . .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~ 151 (243)
T d1wzca1 76 PFDVKGKEVGNYIVIELGIR-VEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEW-S--R 151 (243)
T ss_dssp C----------CEEEECSCC-HHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBC-S--S
T ss_pred ecccchhHHHHHHHHHHhhh-HHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhh-h--h
Confidence 221111000 01 11222222211110 00000 00 00011111000 0 0
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 707 FGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 707 ~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
. .+. .......+.+..+ ..+++.|.+++|+.|++.+++++. ++++++++||||+.||++||+++++
T Consensus 152 ~------~~~----~~~~~~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~~--~~~~~~~~a~GD~~ND~~Ml~~a~~- 217 (243)
T d1wzca1 152 D------GWE----EVLVEGGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYK--RLGQIESYAVGDSYNDFPMFEVVDK- 217 (243)
T ss_dssp S------CHH----HHHHHTTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHH--TTSCEEEEEEECSGGGHHHHTTSSE-
T ss_pred H------HHH----HhhhhcCeEEeec-ccccchhhhhccHHHHHHHHHHhc--CCCcccEEEEcCCHhHHHHHHcCCc-
Confidence 0 011 1111233444444 457899999999999999999882 3788999999999999999999984
Q ss_pred cCCCCCCCCCcEEEEEeCCcccccceEeCChhHHHHHH
Q 045882 787 TYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALL 824 (832)
Q Consensus 787 ~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L 824 (832)
+|+||++..+++-.+++..|+.+++
T Consensus 218 -------------~va~~Na~~~~~~~~~~i~~~~~~i 242 (243)
T d1wzca1 218 -------------VFIVGSLKHKKAQNVSSIIDVLEVI 242 (243)
T ss_dssp -------------EEEESSCCCTTCEEESCHHHHHHHH
T ss_pred -------------EEEeCCCChHHHhhhhHHHHHHHhh
Confidence 7888998878888899888888775
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.8e-22 Score=205.29 Aligned_cols=203 Identities=13% Similarity=0.079 Sum_probs=126.9
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC--CceEEEeCCEEEEeCCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE--NLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--~l~liaenGa~i~~~~~ 655 (832)
+..|||+|+||||++ .++.++++++++|++| +++|+.++++|||+...+.+.+..++ ..++|++||+.++....
T Consensus 3 ~~~li~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~ 78 (232)
T d1xvia_ 3 QPLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQ 78 (232)
T ss_dssp CCEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTT
T ss_pred CCEEEEEECCCCccC---CcCcCCHHHHHHHHHH-HHCCCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecCC
Confidence 345899999999998 6678899999999999 68899999999999999999988764 46799999999987654
Q ss_pred ccEEEcCcc----cchhHHHHHHHHHHHHHhcCCceEEeecc---eeEEEEe----------ccCCCCCCchhHHHHHHH
Q 045882 656 SEWETSTVA----ADFEWKRITEPVMKLYTEATDGSYIEKKE---TALVWHY----------QDAAPGFGSCQAKELLDH 718 (832)
Q Consensus 656 ~~w~~~~~~----~~~~w~~~v~~i~~~~~e~~~gs~ie~k~---~~l~~~~----------~~ad~~~~~~~a~el~~~ 718 (832)
......... ....+............ ........... .....++ +............+....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (232)
T d1xvia_ 79 WQEIDGFPRIISGISHGEISLVLNTLREKE-HFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQ 157 (232)
T ss_dssp CTTSTTTTEEECSSCHHHHHHHHHHHHHHH-CCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHH
T ss_pred ccccchhhhhhhHHHHHHHHHhhhhhhhhh-ccccccccchhhhhhhhhhcccchhhhhhhhcceeeeecccccHHHHHH
Confidence 321111100 01111111111111100 00000000000 0000000 000000000001122223
Q ss_pred HHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 719 LESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 719 l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+..........+..+...+++.|.+++||.|++.|++.+...|+++++++||||+.||++||+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~ 224 (232)
T d1xvia_ 158 FTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY 224 (232)
T ss_dssp HHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE
T ss_pred HHHHhhhccceeeeccceeeccCCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe
Confidence 3333334456677788889999999999999999998654448999999999999999999999985
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1.8e-20 Score=191.33 Aligned_cols=216 Identities=15% Similarity=0.116 Sum_probs=133.3
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEEEeCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYLRWTK 654 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i~~~~ 654 (832)
+.||++||+||||++ .++.++++++++|++| ++.| .++++|||+...+.+.+.... ..++++.||+++...+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~g-~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQKI-KIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG 76 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTTS-EEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHH-HcCC-CEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCC
Confidence 479999999999998 6889999999999999 5655 688999999998888776542 2445555677776666
Q ss_pred CccEEEcCcccch-h-HHHHHHHHHHHHHhcCC----ceEEeecceeEEEEeccCCCCCC-----------chhHHHHHH
Q 045882 655 KSEWETSTVAADF-E-WKRITEPVMKLYTEATD----GSYIEKKETALVWHYQDAAPGFG-----------SCQAKELLD 717 (832)
Q Consensus 655 ~~~w~~~~~~~~~-~-w~~~v~~i~~~~~e~~~----gs~ie~k~~~l~~~~~~ad~~~~-----------~~~a~el~~ 717 (832)
+..+......... . +................ ....+.......+.......... .....+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (243)
T d2amya1 77 KLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVA 156 (243)
T ss_dssp EEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHH
Confidence 5555443321110 0 01111111111111111 11111111122222211111100 011234445
Q ss_pred HHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHHcccccCCCCC
Q 045882 718 HLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFESISQATYGSSL 792 (832)
Q Consensus 718 ~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~a~~~~~~~~~ 792 (832)
.+.+.+....+. ..+++.++||.|+++|||+|+++|+ +++.+++++||| |.||++||+.++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~------~~~~~ev~afGD~~~~g~NDi~Ml~~~g~------- 223 (243)
T d2amya1 157 DLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPRT------- 223 (243)
T ss_dssp HHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT------TSCCSEEEEEECSCC---CCCHHHHCTTE-------
T ss_pred HHHHHhcccceEEEecCCccceeeccccCHHHHHHHHh------CCCcceEEEEcCCCCCCCCcHHHHHccCC-------
Confidence 555555444444 4577899999999999999999874 678899999999 6799999999974
Q ss_pred CCCCcEEEEEeCCcccccceEeCChhHHHHHHHHhh
Q 045882 793 PIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 793 ~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~~l~ 828 (832)
.+++ +++++++.++++.|+
T Consensus 224 ------~~~~-----------v~~~~~~~~~~~~l~ 242 (243)
T d2amya1 224 ------MGYS-----------VTAPEDTRRICELLF 242 (243)
T ss_dssp ------EEEE-----------CSSHHHHHHHHHHHC
T ss_pred ------cEEE-----------eCCHHHHHHHHHHHh
Confidence 2433 356888888888875
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.83 E-value=3.4e-20 Score=185.30 Aligned_cols=187 Identities=17% Similarity=0.179 Sum_probs=148.3
Q ss_pred CCCchHHHhhcCCCChHHHHHHHHHHc--CCCEEEEEecccc-ccCCHHHHHHHHHHHHHh--CCCccCcEEEEEEecCC
Q 045882 305 GIHMGRLESALNHPSSSIKVKEIREQF--KGKKVIVGVDDMD-IFKGISLKLLAMEQLLKV--HPELQGKLVLVQIVNPA 379 (832)
Q Consensus 305 GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~ 379 (832)
|||.+.|.+........+....++++| +++++|++|||++ +.||+..+++|++.|.++ +|+ +.|+.+|...
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g~ 76 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD 76 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCBC
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCC----eEEEEEeecc
Confidence 899999987766666777888888988 5889999999997 589999999999999754 344 4488887321
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCC
Q 045882 380 RSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPK 459 (832)
Q Consensus 380 r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~ 459 (832)
+.++.+ ++.+... ++ -++++.+.++.+++..+|+.||++|+||..||+|++++|||+|
T Consensus 77 ----~~~~~~---~~~~~~~----~~-----~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~------ 134 (196)
T d2bfwa1 77 ----PELEGW---ARSLEEK----HG-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL------ 134 (196)
T ss_dssp ----HHHHHH---HHHHHHH----CT-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT------
T ss_pred ----cchhhh---hhhhhhc----cc-----eeEEeeeccccccchhccccccccccccccccccccchhhhhc------
Confidence 333333 3333222 22 2667788999999999999999999999999999999999999
Q ss_pred chhhhhhhcCCCCCceEEeccCccccccCC--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc
Q 045882 460 MDEAMELASVCPRTSMLVISEFIGCSPSLS--GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS 530 (832)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (832)
+.|+|+|..+|..+.+. .|++++|.|+++++++|.++|.+..+.+....+..++++.+
T Consensus 135 -------------G~pvI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~ 194 (196)
T d2bfwa1 135 -------------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 194 (196)
T ss_dssp -------------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred -------------CceeeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 45799999888887774 48999999999999999999998877666655556665544
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=2.7e-19 Score=182.14 Aligned_cols=193 Identities=17% Similarity=0.179 Sum_probs=114.9
Q ss_pred EEEE-EecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC-CC----CceEEEeCCEEEEeC
Q 045882 580 RAIF-LDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP-CE----NLGIAAEHGYYLRWT 653 (832)
Q Consensus 580 rlI~-lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-l~----~l~liaenGa~i~~~ 653 (832)
|+|+ ||+||||++ .++.++++++++|++| ++.|+ ++++|||........+.+ ++ ..++++.||+.++..
T Consensus 1 k~i~lFDlDGTLl~---~~~~is~~~~~~i~~l-~~~g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 1 RVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSRVQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKH 75 (244)
T ss_dssp CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTTSE-EEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEET
T ss_pred CEEEEEccccCccC---CCCcCCHHHHHHHHHH-HhCCC-EEEEecCChhhhhhhhhhhhccccccceeecccceeeccC
Confidence 3455 699999999 6788999999999999 67775 566777776665555443 32 357899999999987
Q ss_pred CCccEEEcCcccchhHHHHHHHHHH----HHHhcCC----ceEEeecceeEEEEeccCCCCCCc-----------hhHHH
Q 045882 654 KKSEWETSTVAADFEWKRITEPVMK----LYTEATD----GSYIEKKETALVWHYQDAAPGFGS-----------CQAKE 714 (832)
Q Consensus 654 ~~~~w~~~~~~~~~~w~~~v~~i~~----~~~e~~~----gs~ie~k~~~l~~~~~~ad~~~~~-----------~~a~e 714 (832)
+...|......... ......... ....... ..+.........++.......... ....+
T Consensus 76 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
T d2fuea1 76 GRLLSKQTIQNHLG--EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREK 153 (244)
T ss_dssp TEECCCCCHHHHHC--HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHH
T ss_pred CccceeechhHHHh--hhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhhccchhhHHH
Confidence 76555433221111 111111111 1111111 111111112222222211111000 01112
Q ss_pred HHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh----hhHHHHHHccc
Q 045882 715 LLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR----SDEDMFESISQ 785 (832)
Q Consensus 715 l~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~----ND~~Mf~~a~~ 785 (832)
....+.......... ..++..++||.|+++|||+|+++|++ ++.++|++|||+. ||++||+.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~------~~~~ev~afGD~~~~G~ND~eml~~a~~ 223 (244)
T d2fuea1 154 FVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ------DSFDTIHFFGNETSPGGNDFEIFADPRT 223 (244)
T ss_dssp HHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT------SCCSEEEEEESCCSTTSTTHHHHHSTTS
T ss_pred HHHHHHHHhhccceeEeeccCccceecchhccHHHHHHHHhc------CChhhEEEEcCCCCCCCCcHHHHHcCCC
Confidence 223333333333343 34678999999999999999999864 5789999999974 99999999974
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=5.8e-19 Score=190.25 Aligned_cols=201 Identities=13% Similarity=0.152 Sum_probs=150.8
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ 374 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (832)
++.++|+|||++.+.... .+. ....+++.+ .+++++++++|+.+.||+..+++|++++.+++|+.. ++.
T Consensus 160 ~i~vi~~gv~~~~~~~~~-~~~---~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~i 231 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQ-IPN---SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLF 231 (370)
T ss_dssp GEEECCCCCCGGGSGGGS-CTT---HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEE
T ss_pred eEEEEEeecccccccccC-chh---hhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eee
Confidence 456789999998775432 222 234445554 478999999999999999999999999988887654 555
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
++... . + +++++++++.+.. ..+.++. + .+++..+|+.||++|+||..|||+++++|||+|+
T Consensus 232 i~g~~--~-~------~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G 293 (370)
T d2iw1a1 232 VVGQD--K-P------RKFEALAEKLGVR------SNVHFFS-G--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG 293 (370)
T ss_dssp EESSS--C-C------HHHHHHHHHHTCG------GGEEEES-C--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT
T ss_pred ccccc--c-c------ccccccccccccc------ccccccc-c--ccccccccccccccccccccccccceeeecccCC
Confidence 55322 1 1 1334455554432 1355543 3 4689999999999999999999999999999994
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccCC---Cc-eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GA-IRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS 530 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a-~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (832)
.|+|+|+.+|.++.+. .| ++++|.|++++|++|.++|+. ++.++...++.++++.+
T Consensus 294 -------------------~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~ 353 (370)
T d2iw1a1 294 -------------------LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT 353 (370)
T ss_dssp -------------------CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH
T ss_pred -------------------eeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHH
Confidence 4799999999988872 35 455899999999999999984 45556667778899999
Q ss_pred CCHHHHHHHHHHHH
Q 045882 531 HDVAYWAHSFMQDL 544 (832)
Q Consensus 531 ~~~~~W~~~~l~~l 544 (832)
++...|.+...+-+
T Consensus 354 ~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 354 QDLYSLPEKAADII 367 (370)
T ss_dssp SCCSCHHHHHHHHH
T ss_pred hChhHHHHHHHHHH
Confidence 99899987665544
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.60 E-value=1.3e-15 Score=147.35 Aligned_cols=141 Identities=17% Similarity=0.192 Sum_probs=111.0
Q ss_pred EEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 045882 335 KVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVIL 414 (832)
Q Consensus 335 ~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~ 414 (832)
..+|+|||+++.||+..+++|+.++ |+.+ |+.+|..+ .++..+.+.+++.+. +. ..|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~--------~~---~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI--------AP---DNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH--------SC---TTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc--------cc---CcEEE
Confidence 4588999999999999999999765 5655 77777544 234444444444332 11 13666
Q ss_pred ecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---Cc
Q 045882 415 IDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GA 491 (832)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a 491 (832)
+ +.++.+++..+|+.||++|.||..||+|++++|||+|+ .|+|+|..+|+.+.+. .|
T Consensus 72 ~-g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g-------------------~pvi~s~~~~~~e~i~~~~~g 131 (166)
T d2f9fa1 72 L-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG-------------------KPVIAVNEGGFKETVINEKTG 131 (166)
T ss_dssp E-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT-------------------CCEEEESSHHHHHHCCBTTTE
T ss_pred e-eccccccccccccccccccccccccccccccccccccc-------------------ccceeecCCcceeeecCCccc
Confidence 5 68999999999999999999999999999999999994 4799999999998873 36
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHH
Q 045882 492 IRVNPWDIDAVADALHDAITMSDVEK 517 (832)
Q Consensus 492 ~~VnP~d~~~~A~ai~~aL~m~~~e~ 517 (832)
+.+++ |+++++++|.++++.++.-+
T Consensus 132 ~~~~~-d~~~~~~~i~~l~~~~~~~~ 156 (166)
T d2f9fa1 132 YLVNA-DVNEIIDAMKKVSKNPDKFK 156 (166)
T ss_dssp EEECS-CHHHHHHHHHHHHHCTTTTH
T ss_pred ccCCC-CHHHHHHHHHHHHhCHHHHH
Confidence 76665 89999999999999875443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.37 E-value=2.1e-14 Score=141.93 Aligned_cols=73 Identities=11% Similarity=0.052 Sum_probs=58.3
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC----cccccceEe-C
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ----KPSKARYYL-D 815 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~----~~s~A~y~l-~ 815 (832)
+...+|+...+.+++.+ ++++++|+||||+.||++||+.||. +|+++. ++..|+|.+ +
T Consensus 125 ~~~~~~~~~~~~~~~~~---~i~~~eviaiGDg~NDi~Ml~~Ag~--------------gIAmna~~~v~~~~~~~~~~~ 187 (206)
T d1rkua_ 125 GYQLRQKDPKRQSVIAF---KSLYYRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVH 187 (206)
T ss_dssp EEECCSSSHHHHHHHHH---HHTTCEEEEEECSSTTHHHHHHSSE--------------EEEESCCHHHHHHCTTSCEEC
T ss_pred cccccchhhHHHHHHHh---cccccceEEecCCccCHHHHHhCCc--------------cEEECCCHHHHHhCCCceeec
Confidence 34456777778888888 8999999999999999999999995 566754 356678864 7
Q ss_pred ChhHHHHHHHHhhhh
Q 045882 816 DEEDVLALLKGLAAA 830 (832)
Q Consensus 816 ~~~eV~~~L~~l~~~ 830 (832)
+.+|+.+.|.+..+.
T Consensus 188 ~~~d~~~~~~~~~~~ 202 (206)
T d1rkua_ 188 TYEDLKREFLKASSR 202 (206)
T ss_dssp SHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHhhC
Confidence 899999888876654
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.03 E-value=1.5e-10 Score=113.78 Aligned_cols=71 Identities=23% Similarity=0.296 Sum_probs=57.2
Q ss_pred EEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEeC
Q 045882 738 EVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYLD 815 (832)
Q Consensus 738 EV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~ 815 (832)
+....+..|..++..+++.+ +++++++++|||+.||++||+.||.+ ++| ++.. +..|+|+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~iGDs~nDi~m~~~ag~~------------va~-na~~~lk~~Ad~vi~ 198 (210)
T d1j97a_ 135 GEVLKENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGLK------------IAF-CAKPILKEKADICIE 198 (210)
T ss_dssp CSSCSTTHHHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHHHCSEE------------EEE-SCCHHHHTTCSEEEC
T ss_pred ccccccccccchhhhHHHHh---cccccceEEecCCcChHHHHHHCCCC------------EEE-CCCHHHHHhCCEEEc
Confidence 34456778899999999998 99999999999999999999999964 444 3432 578999997
Q ss_pred --ChhHHHHHH
Q 045882 816 --DEEDVLALL 824 (832)
Q Consensus 816 --~~~eV~~~L 824 (832)
|.++|+++|
T Consensus 199 ~~d~~~vl~~l 209 (210)
T d1j97a_ 199 KRDLREILKYI 209 (210)
T ss_dssp SSCGGGGGGGC
T ss_pred CCCHHHHHHHh
Confidence 456887765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.99 E-value=8.9e-10 Score=106.77 Aligned_cols=70 Identities=13% Similarity=0.173 Sum_probs=56.2
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCCh-
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDE- 817 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~- 817 (832)
..+|..+++.+++++ |+++++|++|||+.||++||+.++. +++++++ +..|+|++...
T Consensus 78 ~~~K~~~l~~~~~~~---~i~~~~v~~vGDd~nDl~~l~~~g~--------------siap~nA~~~vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 78 KLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGT--------------SFAVADAPIYVKNAVDHVLSTHG 140 (177)
T ss_dssp CSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTTSSEECSSCT
T ss_pred cccHHHHHHHHHHHh---cCCcceeEEecCCccHHHHHhhCCe--------------EEEcCCccHHHHHhCCEEeCCCC
Confidence 356999999999999 9999999999999999999999984 6677764 67899999643
Q ss_pred -hH-HHHHHHHhhh
Q 045882 818 -ED-VLALLKGLAA 829 (832)
Q Consensus 818 -~e-V~~~L~~l~~ 829 (832)
++ |.++.+.+..
T Consensus 141 G~GavrE~~e~il~ 154 (177)
T d1k1ea_ 141 GKGAFREMSDMILQ 154 (177)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHH
Confidence 22 5666655543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.66 E-value=5.9e-09 Score=104.19 Aligned_cols=69 Identities=9% Similarity=0.132 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccce-EeCChh
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARY-YLDDEE 818 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y-~l~~~~ 818 (832)
+|+..+..+++.+ +++++.++++||+.||++|++.|+. +++++.. .....| ..++..
T Consensus 145 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Dl~~a~~A~~--------------~~a~~~~~~~~~~~~~~~~~~~d~~ 207 (226)
T d2feaa1 145 QCGCCKPSVIHEL---SEPNQYIIMIGDSVTDVEAAKLSDL--------------CFARDYLLNECREQNLNHLPYQDFY 207 (226)
T ss_dssp CCSSCHHHHHHHH---CCTTCEEEEEECCGGGHHHHHTCSE--------------EEECHHHHHHHHHTTCCEECCSSHH
T ss_pred CCHHHHHHHHHHh---cCCCceEEEEeCchhhHHHHHHCCE--------------EEEecchHHHHHHcCCCeeecCCHH
Confidence 4555556667777 8999999999999999999999984 4455541 222223 347889
Q ss_pred HHHHHHHHhhhh
Q 045882 819 DVLALLKGLAAA 830 (832)
Q Consensus 819 eV~~~L~~l~~~ 830 (832)
++...|+++.+.
T Consensus 208 ~i~~~l~~~~~~ 219 (226)
T d2feaa1 208 EIRKEIENVKEV 219 (226)
T ss_dssp HHHHHHHTSHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999887654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.64 E-value=2.4e-08 Score=101.85 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=44.1
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEc---CCChhhHHHHhcCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVS---GRGKVSLGEWLAPC 637 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l 637 (832)
+.|+|+||+||||++ ....+ +.+.++|++| ++.|..|+++| +|++..+.+.+..+
T Consensus 2 ~ik~VifDlDGTL~~---~~~~i-~~a~e~i~~l-~~~g~~~~~~TN~~~~~~~~~~~~l~~~ 59 (250)
T d2c4na1 2 TIKNVICDIDGVLMH---DNVAV-PGAAEFLHGI-MDKGLPLVLLTNYPSQTGQDLANRFATA 59 (250)
T ss_dssp CCCEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHTTCCEEEEESCCSCCHHHHHHHHHHT
T ss_pred CCCEEEEECCCeeEE---CCCcC-ccHHHHHHHH-HHCCCcEEEEeCCCCCCHHHHHHHHhhc
Confidence 578999999999997 44445 4678899999 68899999987 77788887776544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.61 E-value=1e-07 Score=97.16 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=39.4
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCC---ChhhHHHHh
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGR---GKVSLGEWL 634 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR---~~~~l~~~~ 634 (832)
.|+++||+||||++ ....+ +.+.++|++| ++.|..++++|++ +...+.+.+
T Consensus 2 yk~v~fDlDGTL~~---~~~~i-~~a~~~i~~l-~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 2 YQGYLIDLDGTIYL---GKEPI-PAGKRFVERL-QEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCEEEEcCCCccEe---CCCcC-ccHHHHHHHH-HHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 37899999999998 44445 7889999999 6889999999754 455554444
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.54 E-value=8.5e-08 Score=98.10 Aligned_cols=65 Identities=15% Similarity=0.265 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHcccccCCCCCCCCCcEEEEEe--CCc--------ccccceE
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQATYGSSLPIAPEIFACTV--GQK--------PSKARYY 813 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v--G~~--------~s~A~y~ 813 (832)
.+......+++++ |++++++++|||+ .||+.|-+.+|.. +|.| |.. ...++|+
T Consensus 186 P~p~~~~~a~~~l---~~~~~~~lmVGD~~~~DI~ga~~aG~~-------------si~V~~G~~~~~~~~~~~~~PD~i 249 (261)
T d1vjra_ 186 PNPLVVDVISEKF---GVPKERMAMVGDRLYTDVKLGKNAGIV-------------SILVLTGETTPEDLERAETKPDFV 249 (261)
T ss_dssp TSTHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHHTCE-------------EEEESSSSCCHHHHHHCSSCCSEE
T ss_pred CcHHHHHHHHhhh---ccCchhcceecCChhHHHHHHHHCCCc-------------EEEECCCCCCHHHHhhcCCCCCEE
Confidence 3456677888888 9999999999999 5799999999963 5555 421 2346899
Q ss_pred eCChhHHHHHHH
Q 045882 814 LDDEEDVLALLK 825 (832)
Q Consensus 814 l~~~~eV~~~L~ 825 (832)
+++..|+.++|+
T Consensus 250 i~~l~eL~~~l~ 261 (261)
T d1vjra_ 250 FKNLGELAKAVQ 261 (261)
T ss_dssp ESSHHHHHHHHC
T ss_pred ECCHHHHHHHhC
Confidence 999999998874
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.36 E-value=4.5e-07 Score=90.23 Aligned_cols=59 Identities=17% Similarity=0.273 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCC
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDD 816 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~ 816 (832)
+..|+..++.+.+.. +++.++++||+.||++|++.++. .|++|.. ...|.|++.+
T Consensus 151 ~~~K~~~v~~~~~~~-----~~~~~~~vGDs~~Di~~~~~ag~--------------~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF-----HFKKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp TTHHHHHHHHHHHHH-----CCSCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESC
T ss_pred cchHHHHHHHHHhcc-----CccccEEEEeCHhhHHHHHhCCc--------------eEEECCCHHHHHHHHhCCCEeCC
Confidence 345999999887654 57889999999999999999985 4566643 2358899988
Q ss_pred hhHH
Q 045882 817 EEDV 820 (832)
Q Consensus 817 ~~eV 820 (832)
..|+
T Consensus 212 f~el 215 (217)
T d1nnla_ 212 FVEL 215 (217)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 7765
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.96 E-value=1.1e-05 Score=79.79 Aligned_cols=57 Identities=14% Similarity=0.219 Sum_probs=46.6
Q ss_pred CCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC------cccccceEeCChhHHHHHHHHhh
Q 045882 761 GKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ------KPSKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 761 gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~------~~s~A~y~l~~~~eV~~~L~~l~ 828 (832)
+++++.+++|||+.+|+.+-+.+|.. .++|+.|. .+..|+|++++..++.++|+.|.
T Consensus 165 ~~~p~~~l~VGD~~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 165 NYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp CCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred CCChhHheeecCChHHHHHHHHcCCE-----------EEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence 68899999999999999999998853 24455454 24578999999999999999875
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=97.94 E-value=2.1e-05 Score=79.53 Aligned_cols=52 Identities=19% Similarity=0.205 Sum_probs=40.2
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcC---CChhhHHHHhc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSG---RGKVSLGEWLA 635 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~ 635 (832)
.|.|+||+||||++ ... +-+.+.++|+.| ++.|..++++|+ |+...+.+.+.
T Consensus 2 yk~vlFDlDGTL~~---~~~-~i~~a~e~l~~l-~~~g~~~~~~TN~s~~~~~~~~~~l~ 56 (253)
T d1wvia_ 2 YKGYLIDLDGTIYK---GKD-RIPAGEDFVKRL-QERQLPYILVTNNTTRTPEMVQEMLA 56 (253)
T ss_dssp CCEEEEECBTTTEE---TTE-ECHHHHHHHHHH-HHHTCCEEEEECCCSSCHHHHHHHHH
T ss_pred cCEEEEcCcCceEE---CCC-cCccHHHHHHHH-HHCCCCEEEEeCCCCCCHHHHHHHHH
Confidence 47899999999997 333 447889999998 678999999975 55566666554
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.91 E-value=1.3e-05 Score=76.89 Aligned_cols=64 Identities=14% Similarity=0.088 Sum_probs=50.3
Q ss_pred HHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccceEeCChhHHHHH
Q 045882 749 VAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARYYLDDEEDVLAL 823 (832)
Q Consensus 749 al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y~l~~~~eV~~~ 823 (832)
.+..+++.+ ++.+++++++||+.+|+.+=+.+|-. .++.|..|.. ...|+|++++..|+.+.
T Consensus 113 m~~~~~~~~---~i~~~~s~mVGDs~~Di~aA~~Ag~~----------~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 113 MLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG----------TKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp HHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS----------EEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred cccchhhhc---ccccccccccCCCHHHHHHHHHhCCC----------cEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 355667777 99999999999999999999888752 1255666642 24599999999999998
Q ss_pred HH
Q 045882 824 LK 825 (832)
Q Consensus 824 L~ 825 (832)
|+
T Consensus 180 ik 181 (182)
T d2gmwa1 180 IK 181 (182)
T ss_dssp HH
T ss_pred hc
Confidence 86
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.86 E-value=5.3e-05 Score=73.48 Aligned_cols=71 Identities=23% Similarity=0.238 Sum_probs=57.6
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEe
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYL 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l 814 (832)
+.+-.|...+..+++.+ |++++++++|||+.+|+.+-+.+|.. .++|..|.. ...|.|++
T Consensus 134 ~~~~~~p~~~~~~~~~~---~~~~~~~v~VGDs~~Di~aa~~aGi~-----------~i~v~~g~~~~~~l~~~~pd~vi 199 (210)
T d2ah5a1 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEE
T ss_pred ccccccccccchhhhhh---hcccccceeecCCHHHHHHHHHcCCe-----------EEEEcCCCCCHHHHHhCCCCEEE
Confidence 45677888999999998 99999999999999999999999863 245554532 34588999
Q ss_pred CChhHHHHHHH
Q 045882 815 DDEEDVLALLK 825 (832)
Q Consensus 815 ~~~~eV~~~L~ 825 (832)
++..|+.++||
T Consensus 200 ~~l~el~~~le 210 (210)
T d2ah5a1 200 HKPLEVLAYFQ 210 (210)
T ss_dssp SSTTHHHHHTC
T ss_pred CCHHHHHHHhC
Confidence 99999988764
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.86 E-value=4.5e-05 Score=71.72 Aligned_cols=38 Identities=11% Similarity=0.018 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.|......+++.+ |++++++++|||+..|+..-+.+|.
T Consensus 99 p~~~~~~~~~~~~---~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 99 SKVTHFERLHHKT---GVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp CHHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred CChHHHHHHHHHh---CCChHHEEEEcCCHHHHHHHHHcCC
Confidence 3555677788888 9999999999999999999999875
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.82 E-value=7.6e-06 Score=80.23 Aligned_cols=66 Identities=26% Similarity=0.307 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC------cccccceEeCChhH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ------KPSKARYYLDDEED 819 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~------~~s~A~y~l~~~~e 819 (832)
|......+++.+ +++++++++|||+.+|+.+-+.+|.. ++.|+.|. ....|.|++++..|
T Consensus 153 ~p~~~~~~~~~~---~~~~~~~~~igD~~~Di~~A~~aG~~-----------~i~v~~g~~~~~~l~~~~~d~~v~~l~d 218 (224)
T d2hsza1 153 HPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNYNIPIAQSKPDWIFDDFAD 218 (224)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCSTTCCGGGGCCSEEESSGGG
T ss_pred cchhhHHHHHHh---hhhhhccchhcCcHHHHHHHHHcCCe-----------EEEEeCCCCCcchhhhcCCCEEECCHHH
Confidence 444556677777 99999999999999999999999853 13444332 13468899999999
Q ss_pred HHHHHH
Q 045882 820 VLALLK 825 (832)
Q Consensus 820 V~~~L~ 825 (832)
+.++||
T Consensus 219 L~~iie 224 (224)
T d2hsza1 219 ILKITQ 224 (224)
T ss_dssp GGGGTC
T ss_pred HHHhhC
Confidence 887653
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.64 E-value=2.4e-05 Score=72.04 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=42.5
Q ss_pred hccCcEEEEEecCCCcCCCCCC---------CCCCCHHHHHHHHHhhccCCCeEEEEcCCCh
Q 045882 575 KRTSRRAIFLDYDGTVVPHHAL---------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGK 627 (832)
Q Consensus 575 ~~s~~rlI~lD~DGTLl~~~~~---------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 627 (832)
..++.|.|+||+||||+..... ...|-+.++++|+.| ++.|..|+++|||+.
T Consensus 3 ~~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l-~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 3 TPGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRES 63 (149)
T ss_dssp CTTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCC
T ss_pred CCCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHH-HhccCeEEEEecCcH
Confidence 4578899999999999863221 235678999999999 688999999999963
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.57 E-value=0.00038 Score=63.07 Aligned_cols=55 Identities=15% Similarity=0.075 Sum_probs=44.9
Q ss_pred EEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
..+++|-+||++-- ....+-+++.++++.| ++.|+.++++||.........-..+
T Consensus 4 ~~~~~d~~~~~~~g--~~D~lr~~a~~~I~~L-~~~Gi~v~ilTGD~~~~a~~ia~~l 58 (135)
T d2b8ea1 4 TAVIFDKTGTLTKG--KPDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL 58 (135)
T ss_dssp CEEEEECCCCCBCS--CCCCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred EEEEECCceEEEEe--cCCCCCccHHHHHHHH-HHcCCEEEEEcCcchhhhhHHHhhh
Confidence 57899999999752 2345677888889888 6889999999999999888776654
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.56 E-value=5.6e-05 Score=73.33 Aligned_cols=64 Identities=22% Similarity=0.232 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCChhHHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDEEDVL 821 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~eV~ 821 (832)
+....+.+++++ |++++++++|||+.+|+.+=+.+|.. ++.|..|.. -..+.|.+++..|++
T Consensus 139 ~p~~~~~~~~~~---~~~~~~~l~VgDs~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 139 DPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp SSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred hhhhhcccccce---eeeccceeEecCCHHHHHHHHHcCCe-----------EEEEecCCCChhHhhhcCcEeCCHHHHH
Confidence 456777888888 99999999999999999999998863 233444542 246788888887776
Q ss_pred HH
Q 045882 822 AL 823 (832)
Q Consensus 822 ~~ 823 (832)
++
T Consensus 205 ~l 206 (207)
T d2hdoa1 205 EL 206 (207)
T ss_dssp GG
T ss_pred hh
Confidence 53
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=97.55 E-value=6.7e-05 Score=73.63 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=38.8
Q ss_pred hhccCcEEEEEecCCCcCCCCC-----CCCCCCHHHHHHHHHhhccCCCeEEEEcCCC
Q 045882 574 YKRTSRRAIFLDYDGTVVPHHA-----LIKKPSRDVIYVLRELCGDSNNTTFIVSGRG 626 (832)
Q Consensus 574 y~~s~~rlI~lD~DGTLl~~~~-----~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 626 (832)
|...+.++||||.||||..... .+-.+-+.+.++|++| ++.|..++|+|-++
T Consensus 18 ~~p~~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L-~~~G~~l~IvTNQ~ 74 (209)
T d2o2xa1 18 VFPPHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATA-NRAGIPVVVVTNQS 74 (209)
T ss_dssp CCCSSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHH-HHHTCCEEEEEECH
T ss_pred cCCCCCCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHH-HhhCCeEEEecccc
Confidence 3345668999999999975221 1224557899999999 67899999999653
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.33 E-value=0.00014 Score=64.79 Aligned_cols=64 Identities=27% Similarity=0.326 Sum_probs=48.2
Q ss_pred EEEEEecCCCcCCCCC---CCCCCCHHHHHHHHHhhccCCCeEEEEcCCCh---------------hhHHHHhcCC--CC
Q 045882 580 RAIFLDYDGTVVPHHA---LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGK---------------VSLGEWLAPC--EN 639 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~---~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---------------~~l~~~~~~l--~~ 639 (832)
|-|++|+||||..... ....|-+.+++.|+.| .+.|+.++|.|+|+. ....+|+... +-
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l-~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~Y 80 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVPY 80 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCCC
T ss_pred CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHH-HHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCCc
Confidence 4689999999987432 2346889999999999 688999999999963 3466777764 33
Q ss_pred ceEEE
Q 045882 640 LGIAA 644 (832)
Q Consensus 640 l~lia 644 (832)
..++.
T Consensus 81 d~Li~ 85 (124)
T d1xpja_ 81 DEILV 85 (124)
T ss_dssp SEEEE
T ss_pred eEEEE
Confidence 44544
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.16 E-value=0.00017 Score=64.28 Aligned_cols=55 Identities=25% Similarity=0.308 Sum_probs=43.0
Q ss_pred EEEEecCCCcCCCCC-CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhh---HHHHhcC
Q 045882 581 AIFLDYDGTVVPHHA-LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS---LGEWLAP 636 (832)
Q Consensus 581 lI~lD~DGTLl~~~~-~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l~~~~~~ 636 (832)
-|++|+||||..... ....|-+.+++.|++| .+.|+.|+|.|||+... ..+|+..
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L-~~~G~~IIi~TaR~~~~~~~t~~wL~~ 60 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCRA 60 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCcCCCCCCccccccHHHHHHHHHH-HHCCCeEEEEecCCCcchHHHHHHHHH
Confidence 379999999986432 2345778999999999 68899999999998654 4557765
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.14 E-value=0.00065 Score=63.92 Aligned_cols=157 Identities=15% Similarity=0.236 Sum_probs=97.2
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEE
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWET 660 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~ 660 (832)
++.+|-+|||+-.. -..|-+++.++|+.| ++.|+.|+++||=........-..++ +...| ...+.
T Consensus 4 ~~~~d~~~~~~~~~--~Dp~R~~~~~~I~~l-~~~GI~v~miTGD~~~tA~~ia~~~G---i~~~~--------~~v~~- 68 (168)
T d1wpga2 4 VICSDKTGTLTTNQ--LDPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICRRIG---IFGEN--------EEVAD- 68 (168)
T ss_dssp EEEECCTTTTBCCC--ECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTT---SSCTT--------CCCTT-
T ss_pred EEEECCccEEEEEe--cCCCchhHHHHHHHH-HHCcCEEEEECCCCHHHHHHHHHHcC---CCCCc--------ccccc-
Confidence 67889999998632 134567888899988 78899999999999999888777653 21111 00000
Q ss_pred cCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEE
Q 045882 661 STVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVK 740 (832)
Q Consensus 661 ~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~ 740 (832)
....+.+ +.. . ...+..+.+.+ . .-+-++.
T Consensus 69 ----~~~~~~~-~~~-------------------------------~---~~~~~~~~~~~----~-------~v~ar~~ 98 (168)
T d1wpga2 69 ----RAYTGRE-FDD-------------------------------L---PLAEQREACRR----A-------CCFARVE 98 (168)
T ss_dssp ----TEEEHHH-HHH-------------------------------S---CHHHHHHHHHH----C-------CEEESCC
T ss_pred ----ccccccc-cch-------------------------------h---hHHHHhhhhhh----h-------hhhhccc
Confidence 0000000 000 0 01122222211 1 1133444
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL-- 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l-- 814 (832)
|. .|...++.+.+. | ..|.++||+.||.++|+.++ +++++|.. +..|+.++
T Consensus 99 p~--~K~~lv~~l~~~----g---~~Va~vGDG~nD~~AL~~Ad--------------vGIa~~~gt~~a~~aAdivl~~ 155 (168)
T d1wpga2 99 PS--HKSKIVEYLQSY----D---EITAMTGDGVNDAPALKKAE--------------IGIAMGSGTAVAKTASEMVLAD 155 (168)
T ss_dssp HH--HHHHHHHHHHHT----T---CCEEEEECSGGGHHHHHHSS--------------EEEEETTSCHHHHHTCSEEETT
T ss_pred hh--HHHHHHHHHHhc----c---cceeEEecCCCCHHHHHhCC--------------EEEEeccccHHHHHhCCEEEcc
Confidence 54 588877777553 3 46999999999999999997 56777763 45688877
Q ss_pred CChhHHHHHHH
Q 045882 815 DDEEDVLALLK 825 (832)
Q Consensus 815 ~~~~eV~~~L~ 825 (832)
++...|.++++
T Consensus 156 ~~l~~v~~~I~ 166 (168)
T d1wpga2 156 DNFSTIVAAVE 166 (168)
T ss_dssp CCTHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 34677777765
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.67 E-value=0.0031 Score=58.66 Aligned_cols=47 Identities=19% Similarity=0.303 Sum_probs=36.6
Q ss_pred cEEEEEecCCCcCCCCCC--------CCCCCHHHHHHHHHhhccCCCeEEEEcCCC
Q 045882 579 RRAIFLDYDGTVVPHHAL--------IKKPSRDVIYVLRELCGDSNNTTFIVSGRG 626 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~--------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 626 (832)
+|+||||.||||...... .-.+-+.+.++|+.| +++|+.++++|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHH-HHcCCceeeecccc
Confidence 689999999999874321 113457899999999 68899999998763
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=94.99 E-value=0.0056 Score=65.00 Aligned_cols=58 Identities=22% Similarity=0.233 Sum_probs=48.2
Q ss_pred CCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc---------cccceEeCChhHHHHHHHHhhh
Q 045882 761 GKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKP---------SKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 761 gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~---------s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
+..++.|+++||+.||.+|.+.++.. .++|++|... ..|+|++++..++.++|..|.+
T Consensus 312 ~~~~~~~~~vGD~~~D~~aak~Ag~~-----------~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 312 IVNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378 (380)
T ss_dssp CSCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred CCCCCeEEEECCCHHHHHHHHHCCCC-----------EEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence 78899999999999999999999853 3577777532 2699999999999999887654
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.17 E-value=0.022 Score=53.81 Aligned_cols=65 Identities=11% Similarity=0.101 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCChhHHHHHH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALL 824 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L 824 (832)
.|....+.+++.+ |++|+++++|||+.+|+.+-+.+|.. +|.+......+.|.+++..++.++|
T Consensus 138 p~~~~~~~~~~~~---~~~p~~~l~VgD~~~Di~~A~~~G~~-------------~i~v~~~~~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 138 PSPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-------------SINFLESTYEGNHRIQALADISRIF 201 (204)
T ss_dssp TSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEESSCCSCTTEEECSSTTHHHHHT
T ss_pred hhHHHHHHHHHHh---CCCCceEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCCCcCeecCCHHHHHHHh
Confidence 4667889999999 99999999999999999999999853 6667666677889999888887765
Q ss_pred H
Q 045882 825 K 825 (832)
Q Consensus 825 ~ 825 (832)
+
T Consensus 202 ~ 202 (204)
T d2go7a1 202 E 202 (204)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.80 E-value=0.014 Score=55.70 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=37.1
Q ss_pred ccCcEEEEEecCCCcCCCCCC--------CC-CCCHHHHHHHHHhhccCCCeEEEEcCCC
Q 045882 576 RTSRRAIFLDYDGTVVPHHAL--------IK-KPSRDVIYVLRELCGDSNNTTFIVSGRG 626 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~--------~~-~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 626 (832)
+.+.|+++||.||||....+. +- .+.+.+.++|+.| .+.|..++|+|--+
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L-~~~gy~iiIvTNQ~ 76 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQM 76 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHH-HHHTCEEEEEEECH
T ss_pred CCcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHH-HhCCcEEEEecCcc
Confidence 456789999999999753221 10 1368899999999 57799999999753
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=93.61 E-value=0.021 Score=54.43 Aligned_cols=54 Identities=11% Similarity=0.009 Sum_probs=42.0
Q ss_pred HHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--c-----ccccceEeCChhHH
Q 045882 751 EKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--K-----PSKARYYLDDEEDV 820 (832)
Q Consensus 751 ~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~-----~s~A~y~l~~~~eV 820 (832)
+.+++.+ |++++++++|||+.+|+.+-+.+|.. +|.|.. . ...|++.+++..|+
T Consensus 151 ~~~~~~l---~~~~~~~l~igD~~~di~aA~~~G~~-------------~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 151 LDCAAKL---GVDPLTCVALEDSVNGMIASKAARMR-------------SIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp HHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCE-------------EEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred HHHHHHc---CCCchhcEEEeeCHHHHHHHHHcCCE-------------EEEECCCCCccchhhcCCCEEECChhhC
Confidence 3556666 99999999999999999999999853 454432 1 35788999988875
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.26 E-value=0.11 Score=49.42 Aligned_cols=70 Identities=19% Similarity=0.190 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--c--------cccceEeC
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--P--------SKARYYLD 815 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~--------s~A~y~l~ 815 (832)
+-......++.+ |++|+.+++|||+.+|+.+=+.+|.. +++|+.|.. + ..|.++++
T Consensus 143 ~~~~~~~~~~~l---~~~p~~~l~vgDs~~dv~aA~~aG~~-----------~i~v~~~~~~~~~~~~~l~~~~ad~vi~ 208 (222)
T d2fdra1 143 KPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-----------VIGFTGASHTYPSHADRLTDAGAETVIS 208 (222)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECCSTTCCTTHHHHHHHHTCSEEES
T ss_pred CHHHHHHHHHhh---CCCCceEEEEcCCHHHHHHHHHcCCE-----------EEEEccCCCCCcchHHHHHhCCCCEEEC
Confidence 346778888888 99999999999999999999998853 245555531 1 23889999
Q ss_pred ChhHHHHHHHHhhh
Q 045882 816 DEEDVLALLKGLAA 829 (832)
Q Consensus 816 ~~~eV~~~L~~l~~ 829 (832)
+..++..+|.+|++
T Consensus 209 ~l~eL~~ll~~l~~ 222 (222)
T d2fdra1 209 RMQDLPAVIAAMAE 222 (222)
T ss_dssp CGGGHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcC
Confidence 99999999999864
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.91 E-value=0.022 Score=54.58 Aligned_cols=63 Identities=21% Similarity=0.244 Sum_probs=49.2
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCC-----------C--------------------CCCCCHHHHHHHHHhhc
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA-----------L--------------------IKKPSRDVIYVLRELCG 613 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~-----------~--------------------~~~~s~~~~~~L~~L~~ 613 (832)
.+++.+.+.++..+...|+||+|-|++...+ . ...|-+.+++.|+.+ +
T Consensus 21 ~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~-~ 99 (209)
T d2b82a1 21 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMH-V 99 (209)
T ss_dssp ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHH-H
T ss_pred EEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHH-H
Confidence 6788899988877777999999999997321 0 012446788999988 6
Q ss_pred cCCCeEEEEcCCChh
Q 045882 614 DSNNTTFIVSGRGKV 628 (832)
Q Consensus 614 d~g~~V~I~SGR~~~ 628 (832)
++|+.|+.+|||+..
T Consensus 100 ~~Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 100 RRGDAIFFVTGRSPT 114 (209)
T ss_dssp HHTCEEEEEECSCCC
T ss_pred HcCCeEEEEeCCchh
Confidence 889999999999743
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=92.90 E-value=0.11 Score=50.65 Aligned_cols=65 Identities=14% Similarity=0.209 Sum_probs=49.6
Q ss_pred HHHHHHHhhhhCCC-CcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---------------------
Q 045882 749 VAEKVLSTMISDGK-LPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--------------------- 806 (832)
Q Consensus 749 al~~Ll~~l~~~gi-~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--------------------- 806 (832)
.....++.+ |+ +++.+++|||+.+|+.+=+.+|.. .++|.-|..
T Consensus 161 ~~~~~~~~l---~~~p~~~~v~VgDs~~Di~aA~~aG~~-----------ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
T d1swva_ 161 MCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVENMDSVELREKI 226 (257)
T ss_dssp HHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHh---CCCCcceEEEEeCChhhHHHHHHCCCE-----------EEEEccCCCCCCCCHHHHhhCCHHHHHHHH
Confidence 556677777 87 469999999999999999999863 244544531
Q ss_pred --------ccccceEeCChhHHHHHHHHh
Q 045882 807 --------PSKARYYLDDEEDVLALLKGL 827 (832)
Q Consensus 807 --------~s~A~y~l~~~~eV~~~L~~l 827 (832)
...|+|++++..|+..+|+.+
T Consensus 227 ~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 227 EVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 123899999999998888765
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.83 E-value=0.098 Score=50.13 Aligned_cols=66 Identities=17% Similarity=0.219 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHcccccCCCCCCCCCcEEEEEeCC------cccccceEeCChh
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQATYGSSLPIAPEIFACTVGQ------KPSKARYYLDDEE 818 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~------~~s~A~y~l~~~~ 818 (832)
+....+.+++.+ |+++++++.|||+ .+|+.+-+.+|.. +|.+.. ....+.|++++..
T Consensus 157 ~~~~~~~~~~~l---~~~p~~~l~vgD~~~~Di~~A~~~G~~-------------~v~v~~~~~~~~~~~~~d~~i~~l~ 220 (230)
T d1x42a1 157 HPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-------------SILLDRKGEKREFWDKCDFIVSDLR 220 (230)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-------------EEEECTTSCCGGGGGGSSEEESSTT
T ss_pred hhHHHHHHHhhh---cccccccceeecCcHhHHHHHHHcCCE-------------EEEECCCCCCcccccCCCEEECCHH
Confidence 357788888998 9999999999998 5899998888753 444422 1357889999999
Q ss_pred HHHHHHHHh
Q 045882 819 DVLALLKGL 827 (832)
Q Consensus 819 eV~~~L~~l 827 (832)
++.++|++|
T Consensus 221 el~~~l~~l 229 (230)
T d1x42a1 221 EVIKIVDEL 229 (230)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999999875
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.49 E-value=0.17 Score=48.71 Aligned_cols=73 Identities=15% Similarity=0.113 Sum_probs=56.0
Q ss_pred CCCH--HHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCC------cccccceE
Q 045882 743 GVTK--GLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQ------KPSKARYY 813 (832)
Q Consensus 743 gvnK--G~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~------~~s~A~y~ 813 (832)
+..| ....+.+++.+ |++++++++|||+. +|+.+-+.+|... +.+..+. ....++|+
T Consensus 161 ~~~KP~p~~~~~~~~~~---~~~~~~~l~iGD~~~~Di~~A~~~G~~~-----------~~~~~~~~~~~~~~~~~p~~~ 226 (247)
T d2gfha1 161 KEEKPAPSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLKA-----------TVWINKSGRVPLTSSPMPHYM 226 (247)
T ss_dssp SSCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCSE-----------EEEECTTCCCCSSCCCCCSEE
T ss_pred ccchhhhhhHHHHHHHh---hcCHHhcceeccChHhHHHHHHHcCCeE-----------EEEECCCCCCcccccCCCCEE
Confidence 4556 67788899998 99999999999995 8999999998630 1122222 23568899
Q ss_pred eCChhHHHHHHHHhhh
Q 045882 814 LDDEEDVLALLKGLAA 829 (832)
Q Consensus 814 l~~~~eV~~~L~~l~~ 829 (832)
+++..++.++|+++-.
T Consensus 227 i~~l~eL~~ll~~i~~ 242 (247)
T d2gfha1 227 VSSVLELPALLQSIDC 242 (247)
T ss_dssp ESSGGGHHHHHHHHTT
T ss_pred ECCHHHHHHHHHHHhh
Confidence 9999999999998743
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=92.30 E-value=6.2 Score=40.21 Aligned_cols=248 Identities=15% Similarity=0.161 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHH--HhCCEEee
Q 045882 183 ANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKAL--LNADLIGF 260 (832)
Q Consensus 183 vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~l--l~~dligf 260 (832)
+-..+++ +++..+| |+|.||.=-.-.|+..+.....++||+. +|-=..+.++.. |..++..|-+ --||+---
T Consensus 76 ~~~~~~~-~l~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg~~~~--~~~de~~R~~iskls~~hf~ 149 (373)
T d1v4va_ 76 ILPQAAR-ALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFA 149 (373)
T ss_dssp HHHHHHH-HHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEE
T ss_pred HHHHHhh-hhhhcCc--ccccccccCccchhHHHHHHHhhhhhee-eccccccccccc--Ccchhhhhhhhccccceeee
Confidence 3334443 4566678 8999999888888877777777888874 222111222222 4455655532 23677666
Q ss_pred cChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHH----cCCCEE
Q 045882 261 HTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQ----FKGKKV 336 (832)
Q Consensus 261 ~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~----~~~~~v 336 (832)
.|..+.++.++ +|.+ ..+ +..-| -+++|- +.. ...+... ..++.+
T Consensus 150 ~t~~~~~~L~~-----~Ge~--~~~----I~~vG--------~p~~D~--i~~----------~~~~~~~~~~~~~~~~~ 198 (373)
T d1v4va_ 150 PTPLAKANLLK-----EGKR--EEG----ILVTG--------QTGVDA--VLL----------AAKLGRLPEGLPEGPYV 198 (373)
T ss_dssp SSHHHHHHHHT-----TTCC--GGG----EEECC--------CHHHHH--HHH----------HHHHCCCCTTCCSSCEE
T ss_pred cchhhhhhhhh-----hccc--ccc----eeecc--------cchhhH--HHh----------hhhhcccccccccccce
Confidence 67777776653 2322 111 11111 112321 110 1111110 135678
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEec
Q 045882 337 IVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILID 416 (832)
Q Consensus 337 il~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~ 416 (832)
++..-|-...+.....+.++..+.+.+++.. ++....+. +. .+..+.+ .... ...+.++
T Consensus 199 lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~~~~----~~---~~~~~~~----~~~~-----~~n~~~~- 257 (373)
T d1v4va_ 199 TVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPVHLN----PV---VREAVFP----VLKG-----VRNFVLL- 257 (373)
T ss_dssp EECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEECCSC----HH---HHHHHHH----HHTT-----CTTEEEE-
T ss_pred eEEeccccccchHHHHHHHHHHHhhhcccce----eeeeeccc----cc---chhhhhh----hhcc-----cccceee-
Confidence 8889999988999999999999988887654 44333221 11 1111111 1111 1235554
Q ss_pred CCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccc-cC-CCceEe
Q 045882 417 RPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSP-SL-SGAIRV 494 (832)
Q Consensus 417 ~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~-~l-~~a~~V 494 (832)
.+++..+...+++.|++++=.|- -...||.+.+. |+|.=...|-.+ .+ .|..++
T Consensus 258 ~~l~~~~~l~ll~~s~~vignSs-----sgi~Ea~~lg~-------------------P~Inir~~~eRqeg~~~g~nvl 313 (373)
T d1v4va_ 258 DPLEYGSMAALMRASLLLVTDSG-----GLQEEGAALGV-------------------PVVVLRNVTERPEGLKAGILKL 313 (373)
T ss_dssp CCCCHHHHHHHHHTEEEEEESCH-----HHHHHHHHTTC-------------------CEEECSSSCSCHHHHHHTSEEE
T ss_pred ccchHHHHHHHhhhceeEecccc-----hhhhcchhhcC-------------------cEEEeCCCccCHHHHhcCeeEE
Confidence 48999999999999999887663 34458888744 344443333333 23 243333
Q ss_pred CCCCHHHHHHHHHHHhcC
Q 045882 495 NPWDIDAVADALHDAITM 512 (832)
Q Consensus 495 nP~d~~~~A~ai~~aL~m 512 (832)
-+.|.+++..++..+|..
T Consensus 314 v~~d~~~I~~~i~~~l~~ 331 (373)
T d1v4va_ 314 AGTDPEGVYRVVKGLLEN 331 (373)
T ss_dssp CCSCHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHHcC
Confidence 456999999999999873
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=91.97 E-value=0.17 Score=48.47 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=52.2
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC----------------------
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ---------------------- 805 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~---------------------- 805 (832)
......++.+ |++|+++++|||+.+|+.-=+.+|.. +|.|-.
T Consensus 151 ~~f~~a~~~l---g~~p~e~l~VgD~~~di~~A~~aG~~-------------tv~v~r~~~~~~~~~~~~~~~~~~~~~~ 214 (245)
T d1qq5a_ 151 DSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-------------VARVARLSQEALARELVSGTIAPLTMFK 214 (245)
T ss_dssp HHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-------------EEEECCSCHHHHHHHTTSSSCCHHHHHH
T ss_pred HHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCcccccccccccccccchhhh
Confidence 4667788888 99999999999999999988888753 555521
Q ss_pred --------cccccceEeCChhHHHHHHHHhh
Q 045882 806 --------KPSKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 806 --------~~s~A~y~l~~~~eV~~~L~~l~ 828 (832)
....++|++++..|+..+|+.|+
T Consensus 215 ~~~~~~~~~~~~pd~~i~~l~el~~lv~~~~ 245 (245)
T d1qq5a_ 215 ALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (245)
T ss_dssp HHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred hhhhhhhhccCCCCEEECCHHHHHHHHHhhC
Confidence 12457899999999999999875
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=91.76 E-value=0.066 Score=52.35 Aligned_cols=32 Identities=13% Similarity=0.004 Sum_probs=24.9
Q ss_pred HHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 604 VIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 604 ~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
+.++|+.| ++.|+.++|+||.+...+...+..
T Consensus 104 ~~~~L~~L-k~~g~~i~i~Tn~~~~~~~~~l~~ 135 (257)
T d1swva_ 104 VKEVIASL-RERGIKIGSTTGYTREMMDIVAKE 135 (257)
T ss_dssp HHHHHHHH-HHTTCEEEEBCSSCHHHHHHHHHH
T ss_pred HHHHHHHH-HhcccceeecCCCchhhHHHHHHH
Confidence 34567777 567999999999998877776654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=91.60 E-value=0.065 Score=49.90 Aligned_cols=29 Identities=14% Similarity=0.047 Sum_probs=22.9
Q ss_pred HHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 752 KVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 752 ~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+++++ ++ +.+++|||+.+|+.+-+.+|.
T Consensus 142 ~~~~~~---~~--~~~l~vgDs~~Di~aA~~aG~ 170 (187)
T d2fi1a1 142 YLREKY---QI--SSGLVIGDRPIDIEAGQAAGL 170 (187)
T ss_dssp HHHHHT---TC--SSEEEEESSHHHHHHHHHTTC
T ss_pred HHHHHc---CC--CCeEEEeCCHHHHHHHHHcCC
Confidence 445555 54 569999999999999999875
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=90.50 E-value=0.065 Score=50.36 Aligned_cols=35 Identities=20% Similarity=0.076 Sum_probs=26.5
Q ss_pred CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 601 SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 601 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
-+.+.++|+.| +++|+.++|+|+++.. +...+..+
T Consensus 84 ~pgv~~~L~~L-~~~g~~~~v~Sn~~~~-~~~~l~~~ 118 (204)
T d2go7a1 84 MPGAREVLAWA-DESGIQQFIYTHKGNN-AFTILKDL 118 (204)
T ss_dssp CTTHHHHHHHH-HHTTCEEEEECSSCTH-HHHHHHHH
T ss_pred cchHHhhhhcc-cccccchhhhcccchh-hhhhhhhc
Confidence 36778899998 6789999999998764 44555543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=89.99 E-value=0.16 Score=48.43 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=29.4
Q ss_pred HHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 749 VAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 749 al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+....++++ |++|+++++|||+.+|+..=+.+|..
T Consensus 189 ~~~~~~~~~---~~~p~~~l~vgD~~~dv~aA~~aG~~ 223 (253)
T d1zs9a1 189 SYRKIADSI---GCSTNNILFLTDVTREASAAEEADVH 223 (253)
T ss_dssp HHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred HHHHHHHHh---CCCcCcEEEEeCCHHHHHHHHHcCCE
Confidence 444555667 99999999999999999999999863
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=88.68 E-value=0.31 Score=45.72 Aligned_cols=65 Identities=17% Similarity=0.132 Sum_probs=49.4
Q ss_pred CCCHH--HHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC--C-----cccccceE
Q 045882 743 GVTKG--LVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG--Q-----KPSKARYY 813 (832)
Q Consensus 743 gvnKG--~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG--~-----~~s~A~y~ 813 (832)
+..|= ...+.+++++ |+.|++++.|||+.+|+..=+.+|.. +|.|. . ....|+|.
T Consensus 146 ~~~KP~p~~~~~~~~~~---g~~p~e~l~VgD~~~Di~~A~~aG~~-------------~v~v~r~~~~~~~~~~~~d~~ 209 (220)
T d1zrna_ 146 QVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-------------TCWINRTGNVFEEMGQTPDWE 209 (220)
T ss_dssp TCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-------------EEEECTTCCCCCSSSCCCSEE
T ss_pred eccccHHHHHHHHHHHh---CCCCceEEEEecChHhHHHHHHcCCE-------------EEEEcCCCCCcccccCCCCEE
Confidence 44453 5778888888 99999999999999999999998863 55552 1 24568898
Q ss_pred eCChhHHHHH
Q 045882 814 LDDEEDVLAL 823 (832)
Q Consensus 814 l~~~~eV~~~ 823 (832)
+++..++.++
T Consensus 210 i~~l~el~~l 219 (220)
T d1zrna_ 210 VTSLRAVVEL 219 (220)
T ss_dssp ESSHHHHHTT
T ss_pred ECCHHHHHhh
Confidence 9888777653
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=88.12 E-value=0.43 Score=44.72 Aligned_cols=15 Identities=27% Similarity=0.421 Sum_probs=13.3
Q ss_pred CcEEEEEecCCCcCC
Q 045882 578 SRRAIFLDYDGTVVP 592 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~ 592 (832)
++|+++||+||||++
T Consensus 2 ~i~a~iFD~DGTL~d 16 (218)
T d1te2a_ 2 QILAAIFDMDGLLID 16 (218)
T ss_dssp CCCEEEECCBTTTBC
T ss_pred cceEEEECCCCcccC
Confidence 468899999999997
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=86.72 E-value=0.53 Score=44.16 Aligned_cols=56 Identities=11% Similarity=0.098 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEeCChh
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYLDDEE 818 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~~~~ 818 (832)
-...+.+++.+ |+++++++.|||+.+|+.+-+.+|.. +|.|+.. ...+...+++..
T Consensus 148 ~~~~~~~l~~~---~i~~~~~l~VgD~~~di~~A~~aG~~-------------~i~v~~~~~~~~~~~~~~~~~ 205 (221)
T d1o08a_ 148 PDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGAL-------------PIGVGRPEDLGDDIVIVPDTS 205 (221)
T ss_dssp THHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEEESCHHHHCSSSEEESSGG
T ss_pred hHHHHHHHHHc---CCCCceEEEEecCHHHHHHHHHcCCE-------------EEEECChhhcccccEEcCCcc
Confidence 46688889998 99999999999999999999999853 5667653 344555665543
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=86.52 E-value=0.7 Score=46.86 Aligned_cols=92 Identities=13% Similarity=0.093 Sum_probs=58.5
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccc--------c
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGC--------S 485 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------s 485 (832)
.+.+.+++.+ ++..||+||..+ |.| +..|+++|+. |+|+.-+.+. +
T Consensus 273 ~i~~~~p~~~---ll~~a~~~v~hg---G~~-t~~Eal~~G~-------------------P~v~~P~~~d~~~eQ~~nA 326 (391)
T d1pn3a_ 273 FVVGEVNLQE---LFGRVAAAIHHD---SAG-TTLLAMRAGI-------------------PQIVVRRVVDNVVEQAYHA 326 (391)
T ss_dssp CEESSCCHHH---HHTTSSCEEEES---CHH-HHHHHHHHTC-------------------CEEEECSSCCBTTBCCHHH
T ss_pred EEecccCHHH---HHhhccEEEecC---chH-HHHHHHHhCC-------------------cEEEeccccCCcchHHHHH
Confidence 3456777655 567899998664 444 6789999955 4565554442 2
Q ss_pred ccC---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHH
Q 045882 486 PSL---SGAIRVNPWD--IDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVA 534 (832)
Q Consensus 486 ~~l---~~a~~VnP~d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~ 534 (832)
+.+ ..|+.+++.+ .++++++|.++|+.+ -+++.+++.+.+....+.
T Consensus 327 ~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~---~r~~a~~~a~~~~~~g~~ 377 (391)
T d1pn3a_ 327 DRVAELGVGVAVDGPVPTIDSLSAALDTALAPE---IRARATTVADTIRADGTT 377 (391)
T ss_dssp HHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTT---HHHHHHHHGGGSCSCHHH
T ss_pred HHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHhcCHH
Confidence 233 2477776654 799999999999632 234455566666553333
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=80.95 E-value=0.75 Score=43.37 Aligned_cols=16 Identities=38% Similarity=0.669 Sum_probs=13.8
Q ss_pred cCcEEEEEecCCCcCC
Q 045882 577 TSRRAIFLDYDGTVVP 592 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~ 592 (832)
+..|+|+||+||||++
T Consensus 5 ~~i~~vlfD~dGTl~~ 20 (253)
T d1zs9a1 5 AEVTVILLDIEGTTTP 20 (253)
T ss_dssp TTCCEEEECCBTTTBC
T ss_pred CCCCEEEEeCcCCCcc
Confidence 5678999999999985
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.95 E-value=0.62 Score=43.29 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=20.9
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCCh
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGK 627 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 627 (832)
|-+..+++|++|.+..+..|+|+|.|+.
T Consensus 75 p~~gA~e~l~~L~~~~~~~v~i~t~~~~ 102 (195)
T d1q92a_ 75 PLPGAVEAVKEMASLQNTDVFICTSPIK 102 (195)
T ss_dssp BCTTHHHHHHHHHHSTTEEEEEEECCCS
T ss_pred cccCHHHHHHHHhhccCccceEEccccc
Confidence 4477789999995445567889999874
|