Citrus Sinensis ID: 046015

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350--
MAYKIVTLFLLLTLSLPLNLQCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGAIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFTEWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITYQSKKF
cHHHHHHHHHHHHHHccccEEEEccccEEEEEEEcccccccccccccccccEEEEEEEEEEccccEEEEccccHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccEEEccccccccEEEccccccccccccccccccccccccHHHHHHHHHHcccccEEEEEcccEEEEEEEccEEEEEccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccHHHHHHHHccc
cHHHHHHHHHHHHHccccEEEEEEcccHHHHHccccccccccccccccHccEEEEEEEEccccccEEcccccccHHHHHHHHHHHHHccccEEEEEEccccccHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHEEEEccccccEEEEEccccccccccccccccccccHEEHHHHHHHHHccccccEEEEcccccccEEEcccEEEEcccHHHHHHHHHHHHHHcccEEEEEcHHHccccccccccccHHHHHHHHHc
MAYKIVTLFLLLTLslplnlqctsspnwirggywhahselpIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFtntvkhrnpSVITLLSVWGGAIfssminqssnrRSFIKSSIEMARFYRFhgldlhgvlpdkctnmtklgtlFDEWRAEVTSESRKSGKSQLLLVMTshhlpalesvsypldsmqrnLDWIHVLTfdyylptrdNFTEWLKRGFQAKKLvlglpyhgyawtlvnpdenpvgspatgpaitidgsvgYKFIKGFIRdygygaasvynHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITYQSKKF
MAYKIVTLFLLLTLSLPLNLQCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGAIFSsminqssnrRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFTEWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITYQSKKF
MAYKIVTlfllltlslplnlQCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGAIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFTEWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITYQSKKF
**YKIVTLFLLLTLSLPLNLQCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGAIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWRAEV***********LLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFTEWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVG*PATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITY*****
*AYKIVTLFLLLTLSLPLNLQCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGAIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFTEWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITYQS***
MAYKIVTLFLLLTLSLPLNLQCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGAIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWR************SQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFTEWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITYQSKKF
MAYKIVTLFLLLTLSLPLNLQCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGAIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFTEWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITYQSKKF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAYKIVTLFLLLTLSLPLNLQCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGAIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFTEWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITYQSKKF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query352 2.2.26 [Sep-21-2011]
Q9D7Q1464 Chitotriosidase-1 OS=Mus yes no 0.761 0.577 0.279 2e-26
Q13231466 Chitotriosidase-1 OS=Homo yes no 0.835 0.630 0.259 5e-26
P36222383 Chitinase-3-like protein no no 0.764 0.702 0.296 2e-23
Q5RBP6410 Chitinase-3-like protein yes no 0.764 0.656 0.3 2e-23
Q15782390 Chitinase-3-like protein no no 0.792 0.715 0.270 2e-22
Q91Z98402 Chitinase-3-like protein no no 0.906 0.793 0.266 7e-22
Q29411383 Chitinase-3-like protein no no 0.693 0.637 0.294 3e-21
P30922383 Chitinase-3-like protein yes no 0.767 0.704 0.291 4e-21
O35744398 Chitinase-3-like protein no no 0.906 0.801 0.261 4e-21
Q9WTV1381 Chitinase-3-like protein no no 0.764 0.706 0.280 5e-21
>sp|Q9D7Q1|CHIT1_MOUSE Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 Back     alignment and function desciption
 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 47/315 (14%)

Query: 57  FAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSV----WGGAIFSSMINQSSN 112
           FAF     + +     +++      N++K +NP + TLL+V    +G   F+ M+  +SN
Sbjct: 56  FAFAGMDNHQLSTVEHNDELLYQELNSLKTKNPKLKTLLAVGGWTFGTQKFTDMVATASN 115

Query: 113 RRSFIKSSIEMARFYRFHGLDLHGVLP----DKCTNMTKLGTLFDEWRAEVTSESRKSGK 168
           R++F+KS++   R   F GLDL    P        +  +   L  +       E++ SGK
Sbjct: 116 RQTFVKSALSFLRTQGFDGLDLDWEFPGGRGSPTVDKERFTALIQDLAKAFQEEAQSSGK 175

Query: 169 SQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYY------------LPTRDN-- 214
            +LLL         L    Y +D + ++LD+I+++ +D++            L  R    
Sbjct: 176 ERLLLTAAVPSDRGLVDAGYEVDKIAQSLDFINLMAYDFHSSLEKTTGHNSPLYKRQGES 235

Query: 215 -----------FTEWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGS 263
                       T WL++G  A KL+LG+P +G ++TL +  +N VG+PATGP     G+
Sbjct: 236 GAAAEQNVDAAVTLWLQKGTPASKLILGMPTYGRSFTLASSSDNGVGAPATGP-----GA 290

Query: 264 VG-YKFIKGFIRDYGYGAASVYNHSYVMN-----FFSAKTTWVNFDGVETIRSKVSFAKE 317
            G Y   KG +    Y  A  +   + +      +      WV+FD VE+ ++K ++ K+
Sbjct: 291 PGPYTKDKGVL---AYYEACSWKERHRIEDQKVPYAFQDNQWVSFDDVESFKAKAAYLKQ 347

Query: 318 KGLLGYHVFQLSNDD 332
           KGL G  V+ L  DD
Sbjct: 348 KGLGGAMVWVLDLDD 362
Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4
>sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 Back     alignment and function description
>sp|P36222|CH3L1_HUMAN Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 Back     alignment and function description
>sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 Back     alignment and function description
>sp|Q15782|CH3L2_HUMAN Chitinase-3-like protein 2 OS=Homo sapiens GN=CHI3L2 PE=1 SV=1 Back     alignment and function description
>sp|Q91Z98|CH3L4_MOUSE Chitinase-3-like protein 4 OS=Mus musculus GN=Chi3l4 PE=1 SV=2 Back     alignment and function description
>sp|Q29411|CH3L1_PIG Chitinase-3-like protein 1 OS=Sus scrofa GN=CHI3L1 PE=1 SV=2 Back     alignment and function description
>sp|P30922|CH3L1_BOVIN Chitinase-3-like protein 1 OS=Bos taurus GN=CHI3L1 PE=1 SV=3 Back     alignment and function description
>sp|O35744|CH3L3_MOUSE Chitinase-3-like protein 3 OS=Mus musculus GN=Chi3l3 PE=1 SV=2 Back     alignment and function description
>sp|Q9WTV1|CH3L1_RAT Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query352
224142429375 predicted protein [Populus trichocarpa] 0.946 0.888 0.502 1e-105
359497679359 PREDICTED: chitotriosidase-1-like [Vitis 0.948 0.930 0.519 1e-102
359497026 738 PREDICTED: G-type lectin S-receptor-like 0.948 0.452 0.510 1e-101
359484771 781 PREDICTED: G-type lectin S-receptor-like 0.883 0.398 0.511 7e-99
296088199 1130 unnamed protein product [Vitis vinifera] 0.920 0.286 0.523 2e-98
255565055 721 conserved hypothetical protein [Ricinus 0.889 0.434 0.474 4e-91
356558668 909 PREDICTED: uncharacterized protein LOC10 0.963 0.372 0.428 5e-85
224142425 763 predicted protein [Populus trichocarpa] 0.957 0.441 0.453 7e-85
5814093 739 receptor-like kinase CHRK1 [Nicotiana ta 0.886 0.422 0.470 3e-84
147787796 658 hypothetical protein VITISV_036051 [Viti 0.840 0.449 0.424 3e-70
>gi|224142429|ref|XP_002324560.1| predicted protein [Populus trichocarpa] gi|222865994|gb|EEF03125.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/370 (50%), Positives = 261/370 (70%), Gaps = 37/370 (10%)

Query: 7   TLFLLLTLS-LPLNLQCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTY 65
           T+ LL + + L    +C+ +  WI+ GYW+  S+ PI +I+SALF++L+CAFA +NSSTY
Sbjct: 6   TIILLFSFAFLSSQNRCSVAQKWIKAGYWYGGSDFPIPDINSALFTHLLCAFANVNSSTY 65

Query: 66  NIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGG---------------AIFSSMINQS 110
            + I S  +Q F  FT  VK +NPS++TLLS+W G               ++ SSM+ QS
Sbjct: 66  ELSIPSDFQQNFSIFTGIVKRKNPSIVTLLSIWNGQAETYKSIIGEAVNSSVLSSMLTQS 125

Query: 111 SNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQ 170
           S R+SFI+SS++ AR   F G+DL  + P+  T+++ +GTL DEWRA V SE R S  S+
Sbjct: 126 SYRKSFIESSVKTARTLGFQGIDLFWLWPN-STDLSNIGTLLDEWRATVDSEPRNSSVSK 184

Query: 171 LLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFT-------------- 216
           L+L M   + P+L+SVSYP++SM+RNLDW HV+ +DY++P+R+NFT              
Sbjct: 185 LILTMGVRYSPSLQSVSYPINSMKRNLDWAHVVAYDYHMPSRENFTGNHAALYNPSSNIS 244

Query: 217 ------EWLKRGFQAKKLVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGYKFIK 270
                 EWL RG+ A KL+LG+PYHGYAW LV+P +N +G+PA+GP +TIDGS+GY+F++
Sbjct: 245 TDFGIREWLSRGYPANKLLLGMPYHGYAWKLVDPTDNSLGAPASGPGVTIDGSIGYRFVR 304

Query: 271 GFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSN 330
            FI++YGYGA SVYN +YV+N+F A +TW+NFD VET+R+K+S+AKEKGLLGY+VFQ+ N
Sbjct: 305 SFIQNYGYGARSVYNSTYVVNYFVAGSTWINFDDVETVRAKISYAKEKGLLGYNVFQVIN 364

Query: 331 DDKWELSSAG 340
           DD W LS AG
Sbjct: 365 DDNWALSLAG 374

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359497679|ref|XP_003635605.1| PREDICTED: chitotriosidase-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497026|ref|XP_003635401.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484771|ref|XP_003633158.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088199|emb|CBI35714.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255565055|ref|XP_002523520.1| conserved hypothetical protein [Ricinus communis] gi|223537227|gb|EEF38859.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356558668|ref|XP_003547625.1| PREDICTED: uncharacterized protein LOC100787480 [Glycine max] Back     alignment and taxonomy information
>gi|224142425|ref|XP_002324558.1| predicted protein [Populus trichocarpa] gi|222865992|gb|EEF03123.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|5814093|gb|AAD52097.1|AF088885_1 receptor-like kinase CHRK1 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|147787796|emb|CAN60684.1| hypothetical protein VITISV_036051 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query352
TAIR|locus:2134025379 ChiC "class V chitinase" [Arab 0.539 0.501 0.422 2.6e-67
TAIR|locus:2134030366 AT4G19820 [Arabidopsis thalian 0.528 0.508 0.410 4.8e-62
TAIR|locus:2134015398 AT4G19800 [Arabidopsis thalian 0.531 0.469 0.376 8.8e-61
TAIR|locus:2133940362 AT4G19750 [Arabidopsis thalian 0.517 0.502 0.361 1.1e-50
TAIR|locus:2133955369 AT4G19760 [Arabidopsis thalian 0.482 0.460 0.408 7.7e-50
TAIR|locus:2134020332 AT4G19730 [Arabidopsis thalian 0.534 0.566 0.393 5.3e-47
TAIR|locus:2133970261 AT4G19770 [Arabidopsis thalian 0.366 0.494 0.431 6.6e-41
TAIR|locus:2134010363 AT4G19720 [Arabidopsis thalian 0.690 0.669 0.333 1.2e-35
TAIR|locus:2133930211 AT4G19740 [Arabidopsis thalian 0.292 0.488 0.378 2.9e-27
MGI|MGI:1919134464 Chit1 "chitinase 1 (chitotrios 0.349 0.265 0.367 1.2e-24
TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 421 (153.3 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
 Identities = 82/194 (42%), Positives = 121/194 (62%)

Query:    21 QCTSSPNWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNF 80
             QC+ +   ++  YW   SE P+ +I S+LF++L CAFA +NS T  + ++S ++  F  F
Sbjct:    20 QCSMAQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTF 79

Query:    81 TNTVKHRNPSVITLLSVWGG----AIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHG 136
             T TV+ RNPSV TLLS+ GG      ++SM +  ++R+SFI SSI +AR Y FHGLDL  
Sbjct:    80 TQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDW 139

Query:   137 VLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPALESVSYPLDSMQRN 196
               P   T MT  GTL  EWR+ V +E+  SGK +LLL     +     SV YP+ ++  +
Sbjct:   140 EYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASS 199

Query:   197 LDWIHVLTFDYYLP 210
             LDW++++ +D+Y P
Sbjct:   200 LDWVNLMAYDFYGP 213
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0004568 "chitinase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0006032 "chitin catabolic process" evidence=IDA
GO:0008843 "endochitinase activity" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0035885 "exochitinase activity" evidence=IDA
TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133930 AT4G19740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:1919134 Chit1 "chitinase 1 (chitotriosidase)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query352
cd02879299 cd02879, GH18_plant_chitinase_class_V, The class V 1e-99
smart00636334 smart00636, Glyco_18, Glyco_18 domain 2e-49
pfam00704325 pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam 9e-47
cd02872362 cd02872, GH18_chitolectin_chitotriosidase, This co 3e-31
cd00598210 cd00598, GH18_chitinase-like, The GH18 (glycosyl h 5e-17
cd06548322 cd06548, GH18_chitinase, The GH18 (glycosyl hydrol 3e-14
COG3325441 COG3325, ChiA, Chitinase [Carbohydrate transport a 2e-11
cd02873413 cd02873, GH18_IDGF, The IDGF's (imaginal disc grow 2e-11
cd06545253 cd06545, GH18_3CO4_chitinase, The Bacteroides thet 6e-04
COG3858423 COG3858, COG3858, Predicted glycosyl hydrolase [Ge 0.003
>gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
 Score =  296 bits (759), Expect = 1e-99
 Identities = 126/341 (36%), Positives = 175/341 (51%), Gaps = 71/341 (20%)

Query: 26  PNWIRGGYWHAHS-ELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTV 84
              ++GGYW A S E P + I S+LF++L  AFA ++ STY + I+ + E  F  FT TV
Sbjct: 1   STIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETV 60

Query: 85  KHRNPSVITLLSVWGGA----IFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPD 140
           K +NPSV TLLS+ GG      F++M +  + R++FI SSI++AR Y F GLDL    P 
Sbjct: 61  KRKNPSVKTLLSIGGGGSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPS 120

Query: 141 KCTNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPAL----ESVSYPLDSMQRN 196
               M   G L +EWRA V  E+R SG+  LLL    +  P L    +SVSYP++++ +N
Sbjct: 121 SQVEMENFGKLLEEWRAAVKDEARSSGRPPLLLTAAVYFSPILFLSDDSVSYPIEAINKN 180

Query: 197 LDWIHVLTFDYYLPTRDNFT--------------------EWLKRGFQAKKLVLGLPYHG 236
           LDW++V+ +DYY     N T                     W+K G  AKKLVLGLP +G
Sbjct: 181 LDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPLYG 240

Query: 237 YAWTLVNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAK 296
            AWTL                                          Y+ + V ++  A 
Sbjct: 241 RAWTL------------------------------------------YDTTTVSSYVYAG 258

Query: 297 TTWVNFDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELS 337
           TTW+ +D V++I  KV +AK+KGLLGY  + +  DD   LS
Sbjct: 259 TTWIGYDDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNWLS 299

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299
>gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain Back     alignment and domain information
>gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 Back     alignment and domain information
>gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 352
cd02872362 GH18_chitolectin_chitotriosidase This conserved do 100.0
cd02879299 GH18_plant_chitinase_class_V The class V plant chi 100.0
cd02873413 GH18_IDGF The IDGF's (imaginal disc growth factors 100.0
cd02878345 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin 100.0
KOG2806432 consensus Chitinase [Carbohydrate transport and me 100.0
smart00636334 Glyco_18 Glycosyl hydrolase family 18. 100.0
COG3325441 ChiA Chitinase [Carbohydrate transport and metabol 100.0
cd06548322 GH18_chitinase The GH18 (glycosyl hydrolases, fami 100.0
PF00704343 Glyco_hydro_18: Glycosyl hydrolases family 18; Int 100.0
cd02876318 GH18_SI-CLP Stabilin-1 interacting chitinase-like 100.0
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 100.0
cd02874313 GH18_CFLE_spore_hydrolase Cortical fragment-lytic 100.0
cd06549298 GH18_trifunctional GH18 domain of an uncharacteriz 100.0
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 100.0
cd00598210 GH18_chitinase-like The GH18 (glycosyl hydrolase, 100.0
COG3858423 Predicted glycosyl hydrolase [General function pre 100.0
cd06546256 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 100.0
cd06544253 GH18_narbonin Narbonin is a plant 2S protein from 100.0
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 99.97
KOG2091392 consensus Predicted member of glycosyl hydrolase f 99.94
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 99.93
cd02877280 GH18_hevamine_XipI_class_III This conserved domain 99.91
cd06543294 GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch 99.88
COG3469332 Chitinase [Carbohydrate transport and metabolism] 99.79
KOG4701 568 consensus Chitinase [Cell wall/membrane/envelope b 99.49
cd06547339 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG 98.4
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 98.03
PF11340181 DUF3142: Protein of unknown function (DUF3142); In 97.87
PF03644311 Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int 97.72
PF13200316 DUF4015: Putative glycosyl hydrolase domain 97.43
KOG2331 526 consensus Predicted glycosylhydrolase [General fun 95.43
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 93.29
PF14883294 GHL13: Hypothetical glycosyl hydrolase family 13 91.62
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 90.43
PRK12568730 glycogen branching enzyme; Provisional 89.69
COG1649418 Uncharacterized protein conserved in bacteria [Fun 89.63
COG1306400 Uncharacterized conserved protein [Function unknow 88.94
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 88.69
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 88.04
PRK12313633 glycogen branching enzyme; Provisional 87.89
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 87.74
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 86.48
PRK14706 639 glycogen branching enzyme; Provisional 86.43
PRK05402726 glycogen branching enzyme; Provisional 86.33
cd04735353 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN 85.78
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 85.74
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 84.95
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 83.99
PLN02960 897 alpha-amylase 83.45
COG4724 553 Endo-beta-N-acetylglucosaminidase D [Carbohydrate 83.39
PRK147051224 glycogen branching enzyme; Provisional 83.17
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information 
Probab=100.00  E-value=3.2e-64  Score=474.08  Aligned_cols=313  Identities=29%  Similarity=0.466  Sum_probs=272.5

Q ss_pred             EEEEecCC-------CCCCCCCCCCCCccEEEEeeEEEeCCCceEeeCCC---ChHHHHHHHHHHHhcCCCcEEEEEEeC
Q 046015           30 RGGYWHAH-------SELPIAEIHSALFSNLMCAFAFINSSTYNIFINST---SEQFFVNFTNTVKHRNPSVITLLSVWG   99 (352)
Q Consensus        30 v~~y~~~~-------~~~~~~~~~~~~~Thi~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~lk~~~~~~kvllsiGg   99 (352)
                      |+|||+.+       ..+.++++|.++||||+|+|+.++++|........   ....+..+. .+|+++|++||++||||
T Consensus         1 v~~y~~~w~~~~~~~~~~~~~~i~~~~~Thv~y~f~~i~~~g~~~~~~~~~d~~~~~~~~~~-~lk~~~p~lkvlisiGG   79 (362)
T cd02872           1 VVCYFTNWAQYRPGNGKFVPENIDPFLCTHIIYAFAGLNPDGNIIILDEWNDIDLGLYERFN-ALKEKNPNLKTLLAIGG   79 (362)
T ss_pred             CEEEECcchhcCCCCCCcChhHCCcccCCEEEEeeEEECCCCCEEecCchhhhhhhHHHHHH-HHHhhCCCceEEEEEcC
Confidence            57899883       25789999999999999999999998644433322   345566675 68999999999999999


Q ss_pred             Cc----cchhhhcChhhHHHHHHHHHHHHHHcCCCeEEEeecCCCC----CcchhHHHHHHHHHHHHHhhhhhhcCCcee
Q 046015          100 GA----IFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDK----CTNMTKLGTLFDEWRAEVTSESRKSGKSQL  171 (352)
Q Consensus       100 ~~----~~~~~~~~~~~r~~f~~~i~~~l~~~~~DGidiD~e~~~~----~~~~~~~~~~l~~lr~~l~~~~~~~~~~~~  171 (352)
                      |.    .|+.+++|++.|++|++++++++++|+|||||||||+|..    ++++++|+.||++||++|++.+     +++
T Consensus        80 ~~~~~~~f~~~~~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~p~~~~~~~~d~~~~~~ll~~lr~~l~~~~-----~~~  154 (362)
T cd02872          80 WNFGSAKFSAMAASPENRKTFIKSAIAFLRKYGFDGLDLDWEYPGQRGGPPEDKENFVTLLKELREAFEPEA-----PRL  154 (362)
T ss_pred             CCCCcchhHHHhCCHHHHHHHHHHHHHHHHHcCCCCeeeeeeccccCCCCHHHHHHHHHHHHHHHHHHHhhC-----cCe
Confidence            86    6999999999999999999999999999999999999974    4789999999999999998763     358


Q ss_pred             EEEEEecCCccccccCCChhhhhccCcEEEeeccccCCCCCCchh-------------------------HHhHcCCCCc
Q 046015          172 LLVMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFT-------------------------EWLKRGFQAK  226 (352)
Q Consensus       172 ~ls~~~~~~~~~~~~~~d~~~l~~~vD~i~~m~yd~~~~~~~~~~-------------------------~~~~~g~p~~  226 (352)
                      +||+++|+.+......||+++|.+++|+|+||+||++++|....+                         .|++.|+|++
T Consensus       155 ~ls~av~~~~~~~~~~~d~~~l~~~vD~v~vmtYD~~~~~~~~~g~~spl~~~~~~~~~~~~~~v~~~v~~~~~~gvp~~  234 (362)
T cd02872         155 LLTAAVSAGKETIDAAYDIPEISKYLDFINVMTYDFHGSWEGVTGHNSPLYAGSADTGDQKYLNVDYAIKYWLSKGAPPE  234 (362)
T ss_pred             EEEEEecCChHHHhhcCCHHHHhhhcceEEEecccCCCCCCCCCCCCCCCCCCCCCccccccccHHHHHHHHHHcCCCHH
Confidence            999999987766555699999999999999999999998742111                         5677899999


Q ss_pred             ceeeecccceeeeeecCCCCCCCCCCCCCCC-----CCCCccccHHHHHhhhhcCCCceeEEEeccceeEEEEeCCEEEE
Q 046015          227 KLVLGLPYHGYAWTLVNPDENPVGSPATGPA-----ITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVN  301 (352)
Q Consensus       227 Kivlglp~yG~~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~  301 (352)
                      ||+||+|+||+.|++.+..++++|+|..|++     ....|.++|.|||+.+ ..+  ++..||+.+.++|.+.+++||+
T Consensus       235 KlvlGlp~YG~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~g~~~y~ei~~~~-~~~--~~~~~D~~~~~~y~~~~~~~v~  311 (362)
T cd02872         235 KLVLGIPTYGRSFTLASPSNTGVGAPASGPGTAGPYTREAGFLAYYEICEFL-KSG--WTVVWDDEQKVPYAYKGNQWVG  311 (362)
T ss_pred             HeEeccccccceeeecCCccCCCCCccCCCCCCCCCcCCCccchHHHHHHhh-cCC--cEEEEeCCcceeEEEECCEEEE
Confidence            9999999999999998877788888877654     2367899999999988 667  8999999999999999999999


Q ss_pred             eCcHHHHHHHHHHHHhcCCceEEEEeccCCCChhhHHHHHHHhhhhhccC
Q 046015          302 FDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLLITYQSKK  351 (352)
Q Consensus       302 ydd~~S~~~K~~~~~~~~l~Gi~~W~l~~Dd~~~l~~a~~~~l~~~~~~~  351 (352)
                      |||++|++.|++|++++||||+++|+|++||+.+.|+.+++||+++..+.
T Consensus       312 ydd~~Si~~K~~~~~~~~lgGv~iW~l~~DD~~g~cg~~~~pLl~~i~~~  361 (362)
T cd02872         312 YDDEESIALKVQYLKSKGLGGAMVWSIDLDDFRGTCGQGKYPLLNAINRA  361 (362)
T ss_pred             eCCHHHHHHHHHHHHhCCCceEEEEeeecCcCCCccCCCCCcHHHHHHHh
Confidence            99999999999999999999999999999999999998899999887653

The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit Back     alignment and domain information
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00636 Glyco_18 Glycosyl hydrolase family 18 Back     alignment and domain information
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>COG3858 Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii Back     alignment and domain information
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain Back     alignment and domain information
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain Back     alignment and domain information
>COG3469 Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function Back     alignment and domain information
>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG1306 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>COG4724 Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query352
3aqu_A356 Crystal Structure Of A Class V Chitinase From Arabi 4e-69
3alg_A353 Crystal Structure Of Class V Chitinase (E115q Mutan 1e-64
3alf_A353 Crystal Structure Of Class V Chitinase From Nicotia 1e-64
1hkk_A364 High Resoultion Crystal Structure Of Human Chitinas 2e-27
1lg1_A365 Crystal Structure Of Human Chitotriosidase In Compl 2e-27
1hki_A365 Crystal Structure Of Human Chitinase In Complex Wit 2e-27
1waw_A445 Specificity And Affinity Of Natural Product Cyclope 3e-27
1guv_A366 Structure Of Human Chitotriosidase Length = 366 3e-27
1hjv_A362 Crystal Structure Of Hcgp-39 In Complex With Chitin 1e-24
4ay1_A365 Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch 1e-23
1xhg_A361 Crystal Structure Of A 40 Kda Signalling Protein Fr 4e-22
1sr0_A361 Crystal Structure Of Signalling Protein From Sheep( 5e-22
2pi6_A361 Crystal Structure Of The Sheep Signalling Glycoprot 5e-22
1owq_A361 Crystal Structure Of A 40 Kda Signalling Protein (S 6e-22
1tfv_A361 Crystal Structure Of A Buffalo Signaling Glycoprote 7e-22
1e9l_A377 The Crystal Structure Of Novel Mammalian Lectin Ym1 7e-22
2esc_A361 Crystal Structure Of A 40 Kda Protective Signalling 3e-21
1zbv_A361 Crystal Structure Of The Goat Signalling Protein (S 3e-21
1ljy_A361 Crystal Structure Of A Novel Regulatory 40 Kda Mamm 1e-20
1syt_A361 Crystal Structure Of Signalling Protein From Goat S 2e-20
3fxy_A395 Acidic Mammalian Chinase, Catalytic Domain Length = 1e-18
2ybt_A381 Crystal Structure Of Human Acidic Chitinase In Comp 2e-18
1itx_A419 Catalytic Domain Of Chitinase A1 From Bacillus Circ 5e-11
3ars_A584 Crystal Structure Analysis Of Chitinase A From Vibr 1e-08
3b9a_A584 Crystal Structure Of Vibrio Harveyi Chitinase A Com 6e-08
3b8s_A584 Crystal Structure Of Wild-Type Chitinase A From Vib 1e-07
3g6l_A406 The Crystal Structure Of A Chitinase Crchi1 From Th 3e-07
1ffr_A540 Crystal Structure Of Chitinase A Mutant Y390f Compl 2e-06
1ctn_A540 Crystal Structure Of A Bacterial Chitinase At 2.3 A 3e-06
1ehn_A540 Crystal Structure Of Chitinase A Mutant E315q Compl 4e-06
1edq_A540 Crystal Structure Of Chitinase A From S. Marcescens 4e-06
1eib_A540 Crystal Structure Of Chitinase A Mutant D313a Compl 5e-06
1nh6_A540 Structure Of S. Marcescens Chitinase A, E315l, Comp 1e-05
1jnd_A420 Crystal Structure Of Imaginal Disc Growth Factor-2 2e-05
2wly_A548 Chitinase A From Serratia Marcescens Atcc990 In Com 2e-05
2wk2_A540 Chitinase A From Serratia Marcescens Atcc990 In Com 2e-05
1rd6_A563 Crystal Structure Of S. Marcescens Chitinase A Muta 2e-05
1k9t_A540 Chitinase A Complexed With Tetra-N-Acetylchitotrios 4e-05
1w9p_A433 Specificity And Affinity Of Natural Product Cyclope 6e-05
3qok_A420 Crystal Structure Of Putative Chitinase Ii From Kle 6e-05
1wno_A395 Crystal Structure Of A Native Chitinase From Asperg 7e-05
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  258 bits (659), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 197/339 (58%), Gaps = 27/339 (7%)
Query: 29  IRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRN 88
           ++  YW   SE P+ +I S+LF++L CAFA +NS T  + ++S ++  F  FT TV+ RN
Sbjct: 5   VKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRN 64
Query: 89  PSVITLLSVWGG----AIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTN 144
           PSV TLLS+ GG      ++SM +  ++R+SFI SSI +AR Y FHGLDL    P   T 
Sbjct: 65  PSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATE 124
Query: 145 MTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLT 204
           MT  GTL  EWR+ V +E+  SGK +LLL     +     SV YP+ ++  +LDW++++ 
Sbjct: 125 MTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMA 184
Query: 205 FDYYLPTRDNFT---------------------EWLKRGFQAKKLVLGLPYHGYAWTLVN 243
           +D+Y P     T                      W++ G  AKK VLG PY+GYAW L N
Sbjct: 185 YDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTN 244
Query: 244 PDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFD 303
            + +   +P TG AI+ DGS+GY  I+ FI D   GA +VYN + V ++  A T W+ +D
Sbjct: 245 ANSHSYYAPTTGAAISPDGSIGYGQIRKFIVD--NGATTVYNSTVVGDYCYAGTNWIGYD 302
Query: 304 GVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQ 342
             ++I +KV +AK++GLLGY  + +  DD   LS A  Q
Sbjct: 303 DNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQ 341
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 Back     alignment and structure
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 Back     alignment and structure
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 Back     alignment and structure
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 Back     alignment and structure
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 Back     alignment and structure
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 Back     alignment and structure
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 Back     alignment and structure
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 Back     alignment and structure
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 Back     alignment and structure
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 Back     alignment and structure
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 Back     alignment and structure
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 Back     alignment and structure
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 Back     alignment and structure
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 Back     alignment and structure
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 Back     alignment and structure
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 Back     alignment and structure
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 Back     alignment and structure
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 Back     alignment and structure
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 Back     alignment and structure
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 Back     alignment and structure
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 Back     alignment and structure
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 Back     alignment and structure
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 Back     alignment and structure
>pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed With Hexa-n- Acetylchitohexaose (nag)6 Length = 540 Back     alignment and structure
>pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3 Angstroms Resolution Length = 540 Back     alignment and structure
>pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At 1.55 Angstroms Length = 540 Back     alignment and structure
>pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex With Hexasaccharide Length = 540 Back     alignment and structure
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 Back     alignment and structure
>pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline. Length = 548 Back     alignment and structure
>pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline Dithioamide Length = 540 Back     alignment and structure
>pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant W167a Length = 563 Back     alignment and structure
>pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose Length = 540 Back     alignment and structure
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 Back     alignment and structure
>pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae Length = 420 Back     alignment and structure
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query352
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 1e-83
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 1e-82
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 5e-62
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 7e-60
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 9e-60
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 5e-59
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 3e-53
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 8e-38
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 2e-37
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 4e-36
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 1e-35
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 1e-34
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 7e-33
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 1e-32
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 1e-32
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 7e-32
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 9e-32
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 3e-29
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 7e-27
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 1e-24
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 3e-21
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 1e-17
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 4e-12
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 1e-09
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 5e-08
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 7e-06
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 2e-04
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 5e-04
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 Back     alignment and structure
 Score =  256 bits (657), Expect = 1e-83
 Identities = 137/343 (39%), Positives = 197/343 (57%), Gaps = 27/343 (7%)

Query: 27  NWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKH 86
             ++  YW   SE P+ +I S+LF++L CAFA +NS T  + ++S ++  F  FT TV+ 
Sbjct: 3   TVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQR 62

Query: 87  RNPSVITLLSVWGG----AIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKC 142
           RNPSV TLLS+ GG      ++SM +  ++R+SFI SSI +AR Y FHGLDL    P   
Sbjct: 63  RNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSA 122

Query: 143 TNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHV 202
           T MT  GTL  EWR+ V +E+  SGK +LLL     +     SV YP+ ++  +LDW+++
Sbjct: 123 TEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNL 182

Query: 203 LTFDYYLPTRDNFT---------------------EWLKRGFQAKKLVLGLPYHGYAWTL 241
           + +D+Y P     T                      W++ G  AKK VLG PY+GYAW L
Sbjct: 183 MAYDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRL 242

Query: 242 VNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVN 301
            N + +   +P TG AI+ DGS+GY  I+ FI D   GA +VYN + V ++  A T W+ 
Sbjct: 243 TNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVD--NGATTVYNSTVVGDYCYAGTNWIG 300

Query: 302 FDGVETIRSKVSFAKEKGLLGYHVFQLSNDDKWELSSAGMQLL 344
           +D  ++I +KV +AK++GLLGY  + +  DD   LS A  Q  
Sbjct: 301 YDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQAW 343
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query352
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 100.0
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 100.0
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 100.0
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 100.0
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 100.0
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 100.0
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 100.0
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 100.0
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 100.0
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 100.0
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 100.0
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 100.0
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 100.0
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 100.0
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 100.0
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 100.0
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 100.0
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 100.0
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 100.0
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 100.0
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 100.0
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 100.0
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 100.0
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 100.0
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 100.0
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 100.0
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 100.0
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 100.0
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 100.0
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 100.0
2hvm_A273 Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He 99.97
2gsj_A271 Protein PPL-2; mimosoideae, chimerolectin, endochi 99.97
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 99.97
1cnv_A299 Concanavalin B; plant chitinase, chitin binding pr 99.96
2xtk_A310 CHIA1, class III chitinase CHIA1; hydrolase, GH18; 99.95
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 99.95
1eok_A290 Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b 99.94
1ta3_A274 XIP-1, xylanase inhibitor protein I; beta alpha ba 99.93
3mu7_A273 XAIP-II, xylanase and alpha-amylase inhibitor prot 99.9
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 99.85
2dsk_A311 Chitinase; catalytic domain, active domain, crysta 99.82
2w91_A 653 Endo-beta-N-acetylglucosaminidase D; hydrolase, N- 97.43
2vtf_A 626 Endo-beta-N-acetylglucosaminidase; hydrolase, fami 97.39
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 92.16
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 88.49
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 88.11
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 88.09
2aam_A309 Hypothetical protein TM1410; structural genomics, 86.77
3vmn_A 643 Dextranase; TIM barrel, immunoglobrin fold, greek- 85.69
3gr7_A340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 85.46
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 84.87
3kru_A343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 83.98
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 81.51
1o94_A 729 Tmadh, trimethylamine dehydrogenase; electron tran 81.13
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 80.02
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Back     alignment and structure
Probab=100.00  E-value=5.4e-70  Score=509.88  Aligned_cols=318  Identities=43%  Similarity=0.763  Sum_probs=291.5

Q ss_pred             CcEEEEEecCCCCCCCCCCCCCCccEEEEeeEEEeCCCceEeeCCCChHHHHHHHHHHHhcCCCcEEEEEEeCCc----c
Q 046015           27 NWIRGGYWHAHSELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGA----I  102 (352)
Q Consensus        27 ~~~v~~y~~~~~~~~~~~~~~~~~Thi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsiGg~~----~  102 (352)
                      ..+++|||-....+.+++++.++||||+|+|+.++++++.+...+.++..+..+++.+|+++|++|+|+|||||.    .
T Consensus         3 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~~~~~~~~~~~~lk~~~~~lkvllsiGGw~~~~~~   82 (356)
T 3aqu_A            3 TVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTA   82 (356)
T ss_dssp             CCEEEEEECGGGCCCGGGSCGGGCSEEEEEEEEEETTTTEEECCTTTHHHHHHHHHHHTTTCTTCEEEEEEECTTSCHHH
T ss_pred             ceEEEEEEeCCCCCCHHHCCcccCCEEEEEEEEecCCCCEEEeCCccHHHHHHHHHHHHhhCCCceEEEEECCCCCCcch
Confidence            468999994456799999999999999999999999877888887777788889888999999999999999986    6


Q ss_pred             chhhhcChhhHHHHHHHHHHHHHHcCCCeEEEeecCCCCCcchhHHHHHHHHHHHHHhhhhhhcCCceeEEEEEecCCcc
Q 046015          103 FSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQLLLVMTSHHLPA  182 (352)
Q Consensus       103 ~~~~~~~~~~r~~f~~~i~~~l~~~~~DGidiD~e~~~~~~~~~~~~~~l~~lr~~l~~~~~~~~~~~~~ls~~~~~~~~  182 (352)
                      |+.++++++.|++|++++++++++|+|||||||||+|..++++++|+.||++||++|++.+++.++++++||+++|+.+.
T Consensus        83 f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~~~g~~~~~Ls~av~~~~~  162 (356)
T 3aqu_A           83 YASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNN  162 (356)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEEESSSE
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHhCCCeEEEEEeecCChhHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEeccCCch
Confidence            99999999999999999999999999999999999997778999999999999999999888778878999999997665


Q ss_pred             ccccCCChhhhhccCcEEEeeccccCCC-CCCchh--------------------HHhHcCCCCcceeeecccceeeeee
Q 046015          183 LESVSYPLDSMQRNLDWIHVLTFDYYLP-TRDNFT--------------------EWLKRGFQAKKLVLGLPYHGYAWTL  241 (352)
Q Consensus       183 ~~~~~~d~~~l~~~vD~i~~m~yd~~~~-~~~~~~--------------------~~~~~g~p~~Kivlglp~yG~~~~~  241 (352)
                      .....||+++|.+++|||+||+||+||+ |+...+                    .|++.|+|++||+||+|+|||+|++
T Consensus       163 ~~~~~~d~~~l~~~vD~inlMtYD~~g~~w~~~~g~~apl~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~YGr~~~~  242 (356)
T 3aqu_A          163 YYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRL  242 (356)
T ss_dssp             ETTEECCHHHHHHHCSEEEEECCCCCCTTTCSBCCCTTCSCCTTCSSCCHHHHHHHHHHTTCCGGGEEEEEESEEEEEEE
T ss_pred             hhhccCCHHHHhhhccEEEEEeeecccCCCCCCcCCCCcCCCCCCCCccHHHHHHHHHHcCCCHHHEEEEeccceeeeEe
Confidence            5444699999999999999999999998 763211                    6788899999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCccccHHHHHhhhhcCCCceeEEEeccceeEEEEeCCEEEEeCcHHHHHHHHHHHHhcCCc
Q 046015          242 VNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLL  321 (352)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~S~~~K~~~~~~~~l~  321 (352)
                      .++.++++++|..|++..++|.++|.|||+++++.+  ++..||+.++++|.|.+++||+|||++|++.|++|++++|||
T Consensus       243 ~~~~~~~~~~p~~g~~~~~~g~~~y~ei~~~l~~~g--~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~K~~~~~~~gLg  320 (356)
T 3aqu_A          243 TNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLL  320 (356)
T ss_dssp             SCTTCCSTTCBEEEECSSTTCEEEHHHHHHHHHHHT--CEEEEETTTTEEEEEETTEEEEECCHHHHHHHHHHHHHTTCC
T ss_pred             cCCcCCCCCCCCCCCCCCCCCeeeHHHHHHHHhcCC--CeEEEchhhceEEEEeCCEEEEeCCHHHHHHHHHHHHhCCCC
Confidence            998889999999988878889999999999998888  999999999999999999999999999999999999999999


Q ss_pred             eEEEEeccCCCChhhHHHHHHHhhh
Q 046015          322 GYHVFQLSNDDKWELSSAGMQLLIT  346 (352)
Q Consensus       322 Gi~~W~l~~Dd~~~l~~a~~~~l~~  346 (352)
                      |+|+|+|++||.+.++++++..|..
T Consensus       321 Gv~~W~l~~Dd~~~ll~a~~~~l~~  345 (356)
T 3aqu_A          321 GYFSWHVGADDNSGLSRAASQAWDA  345 (356)
T ss_dssp             EEEEECGGGSSTTHHHHHHHHHHHH
T ss_pred             eEEEEeccCCCCchHHHHHHHHhcc
Confidence            9999999999999999999998865
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Back     alignment and structure
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* Back     alignment and structure
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Back     alignment and structure
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Back     alignment and structure
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* Back     alignment and structure
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* Back     alignment and structure
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Back     alignment and structure
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* Back     alignment and structure
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 352
d1goia2356 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic 4e-30
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 1e-28
d1vf8a1302 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin 3e-24
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 2e-23
d1jnda1327 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f 5e-22
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 1e-21
d1kfwa1374 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina 2e-19
d1w9pa1333 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil 3e-19
d1edqa2358 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt 4e-19
d1ll7a1330 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( 6e-18
d1nara_289 c.1.8.5 (A:) Seed storage protein {Vicia narbonens 3e-14
d2ebna_285 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 7e-09
d1vf8a270 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo 1e-07
d1edta_265 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St 1e-06
d1ta3a_274 c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I { 0.002
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase B, catalytic domain
species: Serratia marcescens [TaxId: 615]

 Score =  115 bits (289), Expect = 4e-30
 Identities = 58/332 (17%), Positives = 112/332 (33%), Gaps = 51/332 (15%)

Query: 33  YWHAHSELPIAEIHSALFSNL---MCAFAFINSS---TYNIFINSTSEQFFVNFTNTVKH 86
              +    P++ I  A    L     +F  INS+    ++   N    +  VN    +K 
Sbjct: 22  TDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKA 81

Query: 87  RNPSVITLLSVWG----------GAIFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHG 136
            NPS+  + S+ G           A + + +   ++R  F +S + + + Y F G+++  
Sbjct: 82  HNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDW 141

Query: 137 VLPDKCTNMTKLGTLFDEWRAEVTSESRKSGKSQL---LLVMTSHHLPALESVSYPLDSM 193
               +   +        E R  +  ++   G+  L   L +  +     L      L  +
Sbjct: 142 E-YPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQI 200

Query: 194 QRNLDWIHVLTFDYYLPTRDNFTE-----WLKRGFQAKKLVLGLPYHGYAWTLVNPDENP 248
              LD+I+++T+D   P  +  T      +           L     G++W  +      
Sbjct: 201 VAPLDYINLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 259

Query: 249 VGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETI 308
             S     A+                        V +   VM         V FD  E+ 
Sbjct: 260 PFSLTVDAAV----------------QQHLMMEGVPSAKIVM--------GVPFDDAESF 295

Query: 309 RSKVSFAKEKGLLGYHVFQLSNDD-KWELSSA 339
           + K  + K++ L G   + L  D+   +L +A
Sbjct: 296 KYKAKYIKQQQLGGVMFWHLGQDNRNGDLLAA 327
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query352
d1wb0a1297 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 100.0
d2pi6a1292 Signal processing protein (SPC-40, MGP-40) {Sheep 100.0
d1itxa1347 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 100.0
d1vf8a1302 Chitinase-like lectin ym1, saccharide binding doma 100.0
d1edqa2358 Chitinase A, catalytic domain {Serratia marcescens 100.0
d1kfwa1374 Psychrophilic chitinase B {Arthrobacter sp., tad20 100.0
d1w9pa1333 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 100.0
d1jnda1327 Imaginal disc growth factor-2 {Fruit fly (Drosophi 100.0
d1ll7a1330 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 100.0
d1goia2356 Chitinase B, catalytic domain {Serratia marcescens 100.0
d1nara_289 Seed storage protein {Vicia narbonensis, Narbonin 99.98
d2hvma_273 Hevamine A (chitinase/lysozyme) {Para rubber tree 99.97
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 99.96
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.95
d1cnva_283 Seed storage protein {Jack bean (Canavalia ensifor 99.93
d1ta3a_274 Xylanase inhibitor protein I, XIP-I {Wheat (Tritic 99.93
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.82
d1vf8a270 Chitinase-like lectin ym1 {Mouse (Mus musculus) [T 99.41
d1wb0a268 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 99.28
d2pi6a268 Signal processing protein (SPC-40, MGP-40) {Sheep 99.23
d1itxa272 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 98.98
d1edqa373 Chitinase A {Serratia marcescens [TaxId: 615]} 98.85
d1kfwa261 Psychrophilic chitinase B {Arthrobacter sp., tad20 98.72
d1jnda292 Imaginal disc growth factor-2 {Fruit fly (Drosophi 98.7
d1w9pa262 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 98.13
d1ll7a262 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 98.08
d1goia388 Chitinase B {Serratia marcescens [TaxId: 615]} 97.95
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 86.97
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 86.53
d1vyra_363 Pentaerythritol tetranirate reductase {Enterobacte 84.1
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 83.86
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 82.84
d2nt0a2354 Glucosylceramidase, catalytic domain {Human (Homo 82.01
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 81.11
d1z41a1337 NADPH dehydrogenase NamA {Bacillus subtilis [TaxId 80.12
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-55  Score=397.92  Aligned_cols=252  Identities=29%  Similarity=0.473  Sum_probs=219.3

Q ss_pred             EEEEEecCC-------CCCCCCCCCCCCccEEEEeeEEEeCCCceEeeCCCChHHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 046015           29 IRGGYWHAH-------SELPIAEIHSALFSNLMCAFAFINSSTYNIFINSTSEQFFVNFTNTVKHRNPSVITLLSVWGGA  101 (352)
Q Consensus        29 ~v~~y~~~~-------~~~~~~~~~~~~~Thi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsiGg~~  101 (352)
                      +|||||+.+       ..+.++++|.++||||+|+|+.+++++ .......++..+..+. .+|+++|++|||+|||||.
T Consensus         2 kvvcYy~~w~~~~~~~~~~~~~~i~~~~~THi~yaf~~~~~~~-~~~~~~~~~~~~~~~~-~lk~~~p~lKvllSiGG~~   79 (297)
T d1wb0a1           2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQ-LSTTEWNDETLYQEFN-GLKKMNPKLKTLLAIGGWN   79 (297)
T ss_dssp             EEEEEEETTGGGSCGGGCCCGGGCCTTTCSEEEEEEEEEETTE-EECSSTTHHHHHHHHH-HGGGTCTTCEEEEEEECTT
T ss_pred             eEEEEECcCcccCCCCCCCChhHCCcccCCEEEEEEEEccCCc-cccCCcccHHHHHHHH-HHHHhCCCCeEEEEEeccc
Confidence            689999884       247899999999999999999998764 2223333445566664 7999999999999999987


Q ss_pred             ----cchhhhcChhhHHHHHHHHHHHHHHcCCCeEEEeecCCCC----CcchhHHHHHHHHHHHHHhhhhhhcCCceeEE
Q 046015          102 ----IFSSMINQSSNRRSFIKSSIEMARFYRFHGLDLHGVLPDK----CTNMTKLGTLFDEWRAEVTSESRKSGKSQLLL  173 (352)
Q Consensus       102 ----~~~~~~~~~~~r~~f~~~i~~~l~~~~~DGidiD~e~~~~----~~~~~~~~~~l~~lr~~l~~~~~~~~~~~~~l  173 (352)
                          .|+.++++++.|++||+++++++++|+|||||||||+|..    +.++.+|+.|+++||++|+..++..+++.+.+
T Consensus        80 ~~~~~fs~~~~~~~~R~~Fi~siv~~l~~y~fDGiDiDWE~p~~~~~~~~d~~n~~~l~~~Lr~~l~~~~~~~~~~~~~~  159 (297)
T d1wb0a1          80 FGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL  159 (297)
T ss_dssp             TCSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCCTTHHHHHHHHHHHHHHHHHHHHHHHCSCCCEE
T ss_pred             cccchHHHHhhhhHHHHHHHHHHHHHHHHcCCCceeEEEEeccccCCChHHHHHHHHHHHHHHHHHhhhhhhcCCCceeE
Confidence                6999999999999999999999999999999999999964    46899999999999999999988888888999


Q ss_pred             EEEecCCccccccCCChhhhhccCcEEEeeccccCCCCCCchh-------------------------HHhHcCCCCcce
Q 046015          174 VMTSHHLPALESVSYPLDSMQRNLDWIHVLTFDYYLPTRDNFT-------------------------EWLKRGFQAKKL  228 (352)
Q Consensus       174 s~~~~~~~~~~~~~~d~~~l~~~vD~i~~m~yd~~~~~~~~~~-------------------------~~~~~g~p~~Ki  228 (352)
                      ++++|+.+......|++.++.+++|+|++|+||++|+|++..+                         .|++.|+|++||
T Consensus       160 s~~~~~~~~~~~~~~~~~~i~~~vD~invmtYD~~g~~~~~tg~~aply~~~~~~~~~~~~~~d~~v~~~~~~G~p~~Kl  239 (297)
T d1wb0a1         160 SAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKL  239 (297)
T ss_dssp             EEEECCCHHHHHHHCCHHHHHHHCSEEEECCCCSSCTTSSBCCCSSCSSCCTTCCGGGGGCSHHHHHHHHHHTTCCGGGE
T ss_pred             EEEccCchhHhhhccCHHHHHhhCCEEEEEecccCCCCCCCCCCCCcCCCCccccCCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            9999988776665699999999999999999999998875322                         577788888888


Q ss_pred             eeecccceeeeeecCCCCCCCCCCCCCCCCCCCccccHHHHHhhhhcCCCceeEEEeccceeEEEEeCCEEEEeCcHHHH
Q 046015          229 VLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGYKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETI  308 (352)
Q Consensus       229 vlglp~yG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~S~  308 (352)
                      +||+|                                                                    |||++|+
T Consensus       240 vlGip--------------------------------------------------------------------yd~~~si  251 (297)
T d1wb0a1         240 ILGMP--------------------------------------------------------------------TDDVESF  251 (297)
T ss_dssp             EEEEE--------------------------------------------------------------------SCCHHHH
T ss_pred             EEEec--------------------------------------------------------------------cCCHHHH
Confidence            88875                                                                    6889999


Q ss_pred             HHHHHHHHhcCCceEEEEeccCCCChhh-HHHHHHHhhhhhcc
Q 046015          309 RSKVSFAKEKGLLGYHVFQLSNDDKWEL-SSAGMQLLITYQSK  350 (352)
Q Consensus       309 ~~K~~~~~~~~l~Gi~~W~l~~Dd~~~l-~~a~~~~l~~~~~~  350 (352)
                      +.|++|++++||||+|+|+|++||+.+. |+..++||+++..+
T Consensus       252 ~~K~~~~~~~glgGv~~W~l~~DD~~G~~cg~~~~pLl~ai~~  294 (297)
T d1wb0a1         252 KTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQ  294 (297)
T ss_dssp             HHHHHHHHHTTCCEEEEECGGGSCTTCSSSSSCSSHHHHHHHH
T ss_pred             HHHHHHHHhcCCceEEEEeCccccCCCCcCCCCCccHHHHHHH
Confidence            9999999999999999999999999995 99999999987643
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure