Citrus Sinensis ID: 046073

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVLATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGVGRRICPDLPLDITMLYP
ccccccccccccccccEEccccEEEccEEcccccEEEEEccccccccccccccccccccccccccccccEEEccccccccccccccccccccc
cccHEcccccccccccccccccEEEccEEcccccEEEEEEccccccccHHHccHHHHcccccccccccEEEEcccccccccccHHHHHHHccc
vketfrlhppiplllsrkasedgeiigfivpkGARVLAtsrdestwdhahsfmpirflgsdvdfigrnfesipfgvgrricpdlplditmlyp
vketfrlhppiplllsrkasedgEIIGFIVPKGARVLATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFesipfgvgrricpdlplditmlyp
VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVLATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGVGRRICPDLPLDITMLYP
************LLL******DGEIIGFIVPKGARVLATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGVGRRICPDLPLDITML**
VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVLATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGVGRRICPDLPLDITMLY*
VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVLATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGVGRRICPDLPLDITMLYP
VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVLATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGVGRRICPDLPLDITMLYP
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVLATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGVGRRICPDLPLDITMLYP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query93 2.2.26 [Sep-21-2011]
O64636512 Cytochrome P450 76C1 OS=A yes no 0.924 0.167 0.577 3e-23
D1MI46495 Geraniol 8-hydroxylase OS N/A no 0.978 0.183 0.494 5e-23
O64637512 Cytochrome P450 76C2 OS=A no no 0.946 0.171 0.543 6e-23
O64635511 Cytochrome P450 76C4 OS=A no no 0.946 0.172 0.554 7e-23
Q8VWZ7493 Geraniol 8-hydroxylase OS N/A no 0.946 0.178 0.532 8e-23
E3W9C4513 Alpha-humulene 10-hydroxy N/A no 0.956 0.173 0.542 2e-20
A6YIH8502 Premnaspirodiene oxygenas N/A no 0.989 0.183 0.479 3e-20
Q94FM7504 5-epiaristolochene 1,3-di N/A no 0.989 0.182 0.489 4e-20
P93531500 Cytochrome P450 71D7 OS=S N/A no 0.989 0.184 0.468 9e-20
O48958531 4-hydroxyphenylacetaldehy N/A no 0.956 0.167 0.505 8e-19
>sp|O64636|C76C1_ARATH Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1 Back     alignment and function desciption
 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 4/90 (4%)

Query: 1   VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIR 56
           VKETFRLH P+PLL+ RKA  D EI+GF+V K  +VL    A  RD S WD+   F P R
Sbjct: 366 VKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPER 425

Query: 57  FLGSDVDFIGRNFESIPFGVGRRICPDLPL 86
           FLG D+D  GR++E  PFG GRRICP +PL
Sbjct: 426 FLGKDMDVRGRDYELTPFGAGRRICPGMPL 455

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|D1MI46|C76BA_SWEMU Geraniol 8-hydroxylase OS=Swertia mussotii GN=CYP76B10 PE=1 SV=1 Back     alignment and function description
>sp|O64637|C76C2_ARATH Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1 Back     alignment and function description
>sp|O64635|C76C4_ARATH Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=3 SV=1 Back     alignment and function description
>sp|Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase OS=Catharanthus roseus GN=CYP76B6 PE=1 SV=1 Back     alignment and function description
>sp|E3W9C4|C71A1_ZINZE Alpha-humulene 10-hydroxylase OS=Zingiber zerumbet GN=CYP71BA1 PE=1 SV=1 Back     alignment and function description
>sp|A6YIH8|C7D55_HYOMU Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1 Back     alignment and function description
>sp|Q94FM7|C71DK_TOBAC 5-epiaristolochene 1,3-dihydroxylase OS=Nicotiana tabacum GN=CYP71D20 PE=1 SV=2 Back     alignment and function description
>sp|P93531|C71D7_SOLCH Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1 Back     alignment and function description
>sp|O48958|C71E1_SORBI 4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query93
359474049 399 PREDICTED: cytochrome P450 76C4-like [Vi 0.989 0.230 0.593 2e-25
224058639 493 cytochrome P450 [Populus trichocarpa] gi 0.989 0.186 0.604 3e-25
359474456 443 PREDICTED: LOW QUALITY PROTEIN: cytochro 0.978 0.205 0.610 1e-24
7406712 499 putative ripening-related P-450 enzyme [ 0.989 0.184 0.583 1e-24
297742026 594 unnamed protein product [Vitis vinifera] 0.978 0.153 0.6 2e-24
225426693 499 PREDICTED: cytochrome P450 76C4 [Vitis v 0.989 0.184 0.583 2e-24
225427085 498 PREDICTED: cytochrome P450 76C4 [Vitis v 0.978 0.182 0.6 3e-24
356505481 516 PREDICTED: cytochrome P450 76C4-like [Gl 0.924 0.166 0.6 3e-24
255641226 516 unknown [Glycine max] 0.924 0.166 0.6 3e-24
359474277 499 PREDICTED: LOW QUALITY PROTEIN: 7-ethoxy 0.989 0.184 0.583 9e-24
>gi|359474049|ref|XP_002275279.2| PREDICTED: cytochrome P450 76C4-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 4/96 (4%)

Query: 1   VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIR 56
           VKETFRLHP +P LL R+  ED +I GF VPK A+VL    A  RD +TW++ +SF+P R
Sbjct: 258 VKETFRLHPAVPFLLPRRVEEDTDIQGFTVPKNAQVLVNAWAIGRDPNTWENPNSFVPER 317

Query: 57  FLGSDVDFIGRNFESIPFGVGRRICPDLPLDITMLY 92
           FLG D+D  G+NFE IPFG GRRICP LPL I M++
Sbjct: 318 FLGLDMDVKGQNFELIPFGAGRRICPGLPLAIRMVH 353

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224058639|ref|XP_002299579.1| cytochrome P450 [Populus trichocarpa] gi|222846837|gb|EEE84384.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359474456|ref|XP_003631472.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 76C4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|7406712|emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera] Back     alignment and taxonomy information
>gi|297742026|emb|CBI33813.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225426693|ref|XP_002281735.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225427085|ref|XP_002276561.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356505481|ref|XP_003521519.1| PREDICTED: cytochrome P450 76C4-like [Glycine max] Back     alignment and taxonomy information
>gi|255641226|gb|ACU20890.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|359474277|ref|XP_003631428.1| PREDICTED: LOW QUALITY PROTEIN: 7-ethoxycoumarin O-deethylase-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query93
TAIR|locus:2043699512 CYP76C1 ""cytochrome P450, fam 0.924 0.167 0.577 2.8e-22
TAIR|locus:2043605512 CYP76C2 ""cytochrome P450, fam 0.946 0.171 0.543 4.6e-22
TAIR|locus:2043694511 CYP76C4 ""cytochrome P450, fam 0.946 0.172 0.554 5.9e-22
UNIPROTKB|Q8VWZ7493 CYP76B6 "Geraniol 8-hydroxylas 0.924 0.174 0.544 6.8e-22
TAIR|locus:2012673368 CYP76C5 ""cytochrome P450, fam 0.989 0.25 0.520 9e-22
UNIPROTKB|D1MI46495 CYP76B10 "Geraniol 8-hydroxyla 0.978 0.183 0.494 4e-21
TAIR|locus:2012693511 CYP76C6 ""cytochrome P450, fam 0.924 0.168 0.533 1.1e-18
TAIR|locus:2100982498 CYP76C7 ""cytochrome P450, fam 0.989 0.184 0.474 1.4e-18
TAIR|locus:2102033498 CYP71B31 ""cytochrome P450, fa 0.978 0.182 0.463 6.1e-18
TAIR|locus:2058440508 CYP98A3 "cytochrome P450, fami 0.978 0.179 0.452 1.1e-17
TAIR|locus:2043699 CYP76C1 ""cytochrome P450, family 76, subfamily C, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 265 (98.3 bits), Expect = 2.8e-22, P = 2.8e-22
 Identities = 52/90 (57%), Positives = 62/90 (68%)

Query:     1 VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIR 56
             VKETFRLH P+PLL+ RKA  D EI+GF+V K  +VL    A  RD S WD+   F P R
Sbjct:   366 VKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPER 425

Query:    57 FLGSDVDFIGRNFESIPFGVGRRICPDLPL 86
             FLG D+D  GR++E  PFG GRRICP +PL
Sbjct:   426 FLGKDMDVRGRDYELTPFGAGRRICPGMPL 455
GO:0005506 "iron ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0009055 "electron carrier activity" evidence=IEA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2043605 CYP76C2 ""cytochrome P450, family 76, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043694 CYP76C4 ""cytochrome P450, family 76, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8VWZ7 CYP76B6 "Geraniol 8-hydroxylase" [Catharanthus roseus (taxid:4058)] Back     alignment and assigned GO terms
TAIR|locus:2012673 CYP76C5 ""cytochrome P450, family 76, subfamily C, polypeptide 5"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|D1MI46 CYP76B10 "Geraniol 8-hydroxylase" [Swertia mussotii (taxid:137888)] Back     alignment and assigned GO terms
TAIR|locus:2012693 CYP76C6 ""cytochrome P450, family 76, subfamily C, polypeptide 6"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100982 CYP76C7 ""cytochrome P450, family 76, subfamily C, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102033 CYP71B31 ""cytochrome P450, family 71, subfamily B, polypeptide 31"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058440 CYP98A3 "cytochrome P450, family 98, subfamily A, polypeptide 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
CYP76F3
cytochrome P450 (466 aa)
(Populus trichocarpa)
Predicted Functional Partners:
CYP715A2-2
cytochrome P450 (359 aa)
  •     0.450

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query93
PLN02183516 PLN02183, PLN02183, ferulate 5-hydroxylase 2e-25
PLN02687517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 4e-25
pfam00067461 pfam00067, p450, Cytochrome P450 7e-23
PLN02966502 PLN02966, PLN02966, cytochrome P450 83A1 7e-21
PLN00168519 PLN00168, PLN00168, Cytochrome P450; Provisional 4e-20
PLN00110504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 4e-19
PLN02394503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 1e-18
PLN03234499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 2e-18
PLN03112514 PLN03112, PLN03112, cytochrome P450 family protein 3e-16
PLN02655466 PLN02655, PLN02655, ent-kaurene oxidase 5e-13
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 8e-11
PTZ00404482 PTZ00404, PTZ00404, cytochrome P450; Provisional 2e-10
PLN02290516 PLN02290, PLN02290, cytokinin trans-hydroxylase 2e-09
PLN03141452 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-m 7e-09
PLN02971543 PLN02971, PLN02971, tryptophan N-hydroxylase 8e-08
PLN02302490 PLN02302, PLN02302, ent-kaurenoic acid oxidase 5e-06
PLN02936489 PLN02936, PLN02936, epsilon-ring hydroxylase 5e-06
PLN03018534 PLN03018, PLN03018, homomethionine N-hydroxylase 2e-05
PLN02738633 PLN02738, PLN02738, carotene beta-ring hydroxylase 3e-05
PLN02987472 PLN02987, PLN02987, Cytochrome P450, family 90, su 3e-05
PLN02774463 PLN02774, PLN02774, brassinosteroid-6-oxidase 4e-05
PLN02648480 PLN02648, PLN02648, allene oxide synthase 3e-04
PLN02500490 PLN02500, PLN02500, cytochrome P450 90B1 0.002
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information 
 Score = 97.6 bits (243), Expect = 2e-25
 Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 6/96 (6%)

Query: 1   VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIR 56
           +KET RLHPPIPLLL  + +ED E+ G+ +PK +RV+    A  RD+++W+   +F P R
Sbjct: 370 LKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSR 428

Query: 57  FLGSDV-DFIGRNFESIPFGVGRRICPDLPLDITML 91
           FL   V DF G +FE IPFG GRR CP + L +  L
Sbjct: 429 FLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYAL 464

Length = 516
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase Back     alignment and domain information
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase Back     alignment and domain information
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase Back     alignment and domain information
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 93
KOG0156489 consensus Cytochrome P450 CYP2 subfamily [Secondar 99.97
KOG0158499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.97
PLN02500490 cytochrome P450 90B1 99.96
PF00067463 p450: Cytochrome P450 p450 superfamily signature b 99.96
PLN02966502 cytochrome P450 83A1 99.96
PLN02183516 ferulate 5-hydroxylase 99.96
KOG0157497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.96
PTZ00404482 cytochrome P450; Provisional 99.96
PLN02971543 tryptophan N-hydroxylase 99.96
PLN02394503 trans-cinnamate 4-monooxygenase 99.96
PLN03234499 cytochrome P450 83B1; Provisional 99.96
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.96
PLN02774463 brassinosteroid-6-oxidase 99.95
PLN00168519 Cytochrome P450; Provisional 99.95
PLN00110504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.95
PLN02169500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.95
PLN02687517 flavonoid 3'-monooxygenase 99.95
PLN03195516 fatty acid omega-hydroxylase; Provisional 99.95
PLN02290516 cytokinin trans-hydroxylase 99.95
PLN02655466 ent-kaurene oxidase 99.95
PLN03018534 homomethionine N-hydroxylase 99.95
PLN02738633 carotene beta-ring hydroxylase 99.95
PLN02426502 cytochrome P450, family 94, subfamily C protein 99.95
PLN03112514 cytochrome P450 family protein; Provisional 99.94
PLN02196463 abscisic acid 8'-hydroxylase 99.94
KOG0159519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.94
PLN02302490 ent-kaurenoic acid oxidase 99.94
PLN02987472 Cytochrome P450, family 90, subfamily A 99.94
PLN02936489 epsilon-ring hydroxylase 99.94
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.93
KOG0684486 consensus Cytochrome P450 [Secondary metabolites b 99.92
PLN02648480 allene oxide synthase 99.89
PF11138145 DUF2911: Protein of unknown function (DUF2911); In 85.27
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=99.97  E-value=1.2e-31  Score=185.05  Aligned_cols=91  Identities=52%  Similarity=0.940  Sum_probs=83.4

Q ss_pred             CeeecccCCCcccccceeecCCceEecEEeCCCCeEE----eeccCCCCCCCCCCcccCcccCCCccccCCCccccccCC
Q 046073            1 VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGV   76 (93)
Q Consensus         1 i~E~lRl~~~~~~~~~r~~~~~~~i~g~~ip~g~~v~----~~~~~~~~~~~~~~f~p~R~~~~~~~~~~~~~~~~~fg~   76 (93)
                      |+|++|++|++|..++|.+++|++|+||.||+||.|.    ++|+||++|+||++|+||||++.. +.......++|||.
T Consensus       352 i~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~  430 (489)
T KOG0156|consen  352 IKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGS  430 (489)
T ss_pred             HHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCceEecCCCC
Confidence            5899999999999999999999999999999999998    899999999999999999999875 22225568999999


Q ss_pred             CCCcCCChhhhhhccC
Q 046073           77 GRRICPDLPLDITMLY   92 (93)
Q Consensus        77 G~r~C~G~~~a~~e~~   92 (93)
                      |+|.|+|+.+|+++++
T Consensus       431 GRR~CpG~~La~~~l~  446 (489)
T KOG0156|consen  431 GRRICPGEGLARAELF  446 (489)
T ss_pred             CcCCCCcHHHHHHHHH
Confidence            9999999999999885

>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query93
3ruk_A494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 8e-09
3qz1_A496 Crystal Structure Of Bovine Steroid Of 21-Hydroxyla 2e-08
3ld6_A461 Crystal Structure Of Human Lanosterol 14alpha-Demet 5e-07
2f9q_A479 Crystal Structure Of Human Cytochrome P450 2d6 Leng 2e-06
3qm4_A479 Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Compl 4e-06
3c6g_A479 Crystal Structure Of Cyp2r1 In Complex With Vitamin 5e-06
3czh_A481 Crystal Structure Of Cyp2r1 In Complex With Vitamin 5e-06
4dvq_A483 Structure Of Human Aldosterone Synthase, Cyp11b2, I 7e-06
3dbg_A467 Crystal Structure Of Cytochrome P450 170a1 (Cyp170a 3e-05
4i8v_A491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 5e-05
3mzs_A486 Crystal Structure Of Cytochrome P450 Cyp11a1 In Com 6e-05
3k9v_A482 Crystal Structure Of Rat Mitochondrial P450 24a1 S5 8e-05
1u13_A455 Crystal Structure Analysis Of The C37lC151TC442A-Tr 1e-04
1ea1_A455 Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) 1e-04
2w0a_A455 Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[( 1e-04
1x8v_A455 Estriol-Bound And Ligand-Free Structures Of Sterol 1e-04
2rfb_A343 Crystal Structure Of A Cytochrome P450 From The The 2e-04
3vno_A407 Cytochrome P450sp Alpha (cyp152b1) Mutant R241e Len 2e-04
3vm4_A407 Cytochrome P450sp Alpha (Cyp152b1) In Complex With 2e-04
3voo_A407 Cytochrome P450sp Alpha (cyp152b1) Mutant A245e Len 2e-04
3awq_A415 Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f Leng 2e-04
3awm_A415 Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With P 2e-04
2pg6_A476 Crystal Structure Of Human Microsomal P450 2a6 L240 2e-04
1z10_A476 Crystal Structure Of Human Microsomal P450 2a6 With 2e-04
2pg7_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 2e-04
2pg5_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 2e-04
2hi4_A495 Crystal Structure Of Human Microsomal P450 1a2 In C 3e-04
3ebs_A476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 3e-04
3awp_A415 Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g Len 6e-04
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure 
Iteration: 1

 Score = 55.5 bits (132), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 1   VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIR 56
           ++E  RL P  P+L+  KA+ D  I  F V KG  V+    A   +E  W     FMP R
Sbjct: 339 IREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPER 398
Query: 57  FLG-SDVDFIGRNFESIPFGVGRRIC 81
           FL  +    I  +   +PFG G R C
Sbjct: 399 FLNPAGTQLISPSVSYLPFGAGPRSC 424
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase (P450c21) Length = 496 Back     alignment and structure
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase (C Complex With Ketoconazole Length = 461 Back     alignment and structure
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6 Length = 479 Back     alignment and structure
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex Length = 479 Back     alignment and structure
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3 Length = 479 Back     alignment and structure
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 Length = 481 Back     alignment and structure
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In Complex With Deoxycorticosterone Length = 483 Back     alignment and structure
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From Streptomyces Coelicolor Length = 467 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex With 22- Hydroxy-Cholesterol Length = 486 Back     alignment and structure
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In Complex With Chaps Length = 482 Back     alignment and structure
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple Mutant Of Cyp51 From Mycobacterium Tuberculosis Length = 455 Back     alignment and structure
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From Mycobacterium Tuberculosis In Complex With Fluconazole Length = 455 Back     alignment and structure
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl] Cyclohexanecarboxamide Length = 455 Back     alignment and structure
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol 14alpha- Demethylase (Cyp51) Length = 455 Back     alignment and structure
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The Thermoacidophilic Archaeon Picrophilus Torridus Length = 343 Back     alignment and structure
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e Length = 407 Back     alignment and structure
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With (R)-Ibuprophen Length = 407 Back     alignment and structure
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e Length = 407 Back     alignment and structure
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f Length = 415 Back     alignment and structure
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic Acid Length = 415 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g Length = 415 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query93
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 5e-28
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 8e-26
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 1e-24
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 4e-23
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 2e-20
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 9e-19
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 5e-18
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 8e-18
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 1e-17
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 2e-17
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 1e-16
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 1e-16
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 2e-16
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 2e-16
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 7e-16
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 1e-15
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 2e-15
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 3e-15
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 1e-14
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 2e-14
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 7e-14
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 2e-13
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 3e-13
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 4e-13
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 5e-13
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 7e-12
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 3e-11
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 9e-11
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 2e-10
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 8e-06
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 1e-05
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 1e-05
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 3e-05
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 3e-05
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 7e-05
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 7e-05
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 1e-04
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 1e-04
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 1e-04
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 1e-04
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 1e-04
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 2e-04
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 2e-04
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 2e-04
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 2e-04
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 2e-04
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 2e-04
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 3e-04
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 3e-04
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 3e-04
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 3e-04
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 6e-04
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 9e-04
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
 Score =  103 bits (260), Expect = 5e-28
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 1   VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIR 56
           +KET RLHP    L  R    D  +  +++P    V     A  R+ + +    +F P R
Sbjct: 341 IKETLRLHPISVTL-QRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTR 399

Query: 57  FLGSDVDFIGRNFESIPFGVGRRICP 82
           +L  D +     F ++ FG G R C 
Sbjct: 400 WLSKDKN--ITYFRNLGFGWGVRQCL 423
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Length = 441 Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Length = 343 Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Length = 419 Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Length = 436 Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Length = 411 Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Length = 396 Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Length = 413 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Length = 412 Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Length = 408 Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Length = 416 Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Length = 406 Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Length = 367 Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Length = 404 Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Length = 403 Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Length = 418 Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Length = 398 Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} Length = 417 Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Length = 368 Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Length = 394 Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Length = 412 Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 381 Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Length = 411 Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} PDB: 3ejd_B* 3eje_B* Length = 404 Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Length = 425 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query93
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.97
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.96
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.96
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.96
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.96
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 99.96
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.96
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.96
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.96
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 99.96
3ld6_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.96
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.96
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.96
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.96
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.96
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.96
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.96
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 99.95
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.95
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.95
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.95
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.95
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 99.95
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.95
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.95
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.95
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.95
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.95
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.95
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.95
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 99.95
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.95
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.94
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 99.94
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.94
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.94
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.94
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.94
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.94
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 99.94
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.94
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.94
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.94
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.94
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.94
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 99.94
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.94
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.94
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 99.94
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 99.94
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.94
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.94
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.94
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.94
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.94
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.94
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.94
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.94
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.94
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.94
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.94
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.94
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.94
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.94
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 99.94
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.94
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 99.93
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.93
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.93
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 99.93
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 99.93
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.93
3v8d_A491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.93
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.92
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 99.92
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.91
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.89
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
Probab=99.97  E-value=2.8e-32  Score=184.06  Aligned_cols=91  Identities=32%  Similarity=0.617  Sum_probs=82.2

Q ss_pred             CeeecccCCCcccccceeecCCceEecEEeCCCCeEE----eeccCCCCCCCCCCcccCcccCCCccccCCCccccccCC
Q 046073            1 VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGV   76 (93)
Q Consensus         1 i~E~lRl~~~~~~~~~r~~~~~~~i~g~~ip~g~~v~----~~~~~~~~~~~~~~f~p~R~~~~~~~~~~~~~~~~~fg~   76 (93)
                      |+|+||++|+++...+|.+.+|++++|+.||+|+.|.    ++|+|+++|+||++|+||||++.+... ..+..|+|||.
T Consensus       338 i~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~-~~~~~~~pFG~  416 (479)
T 3tbg_A          338 IHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHF-VKPEAFLPFSA  416 (479)
T ss_dssp             HHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGBCTTCCB-CCCTTCCTTCC
T ss_pred             eeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccCCCCccc-CCCCceecCCC
Confidence            5899999999999777788899999999999999999    899999999999999999999876543 34568999999


Q ss_pred             CCCcCCChhhhhhccC
Q 046073           77 GRRICPDLPLDITMLY   92 (93)
Q Consensus        77 G~r~C~G~~~a~~e~~   92 (93)
                      |+|.|+|++||++||.
T Consensus       417 G~R~C~G~~lA~~e~~  432 (479)
T 3tbg_A          417 GRRACLGEPLARMELF  432 (479)
T ss_dssp             STTSCTTHHHHHHHHH
T ss_pred             CCcCChhHHHHHHHHH
Confidence            9999999999999974
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 93
d1tqna_472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 3e-14
d3czha1463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 3e-13
d1po5a_465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 3e-11
d2ciba1445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 3e-08
d1r9oa_467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 1e-07
d2ij2a1453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 3e-05
d1cpta_428 a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas s 8e-05
d1odoa_401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 1e-04
d1jfba_399 a.104.1.1 (A:) Cytochrome P450-NOR, nitric reducta 3e-04
d1z8oa1402 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharo 5e-04
d1n97a_385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 7e-04
d1izoa_411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 8e-04
d1gwia_403 a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyce 0.001
d1q5da_401 a.104.1.1 (A:) Cytochrome P450epok {Sorangium cell 0.002
d1ueda_403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 0.002
d1lfka_394 a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatops 0.002
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome P450 3a4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (155), Expect = 3e-14
 Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 1   VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIR 56
           V ET RL P    L  R   +D EI G  +PKG  V+    A  RD   W     F+P R
Sbjct: 333 VNETLRLFPIAMRL-ERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 391

Query: 57  FLGSDVDFIGRNFESIPFGVGRRICP 82
           F   + D I   +   PFG G R C 
Sbjct: 392 FSKKNKDNIDP-YIYTPFGSGPRNCI 416
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Length = 428 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Length = 399 Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Length = 402 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 403 Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Length = 401 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Length = 394 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query93
d3czha1463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.96
d1po5a_465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.96
d1tqna_472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.96
d1r9oa_467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.96
d2ciba1445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.95
d1izoa_411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.95
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.94
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 99.94
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.93
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.93
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.93
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.92
d2ij2a1453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.92
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.91
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.91
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.91
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.91
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.9
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.9
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.9
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.89
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Vitamin D 25-hydroxylase Cyp2R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.4e-31  Score=174.78  Aligned_cols=90  Identities=32%  Similarity=0.573  Sum_probs=81.5

Q ss_pred             CeeecccCCCcccccceeecCCceEecEEeCCCCeEE----eeccCCCCCCCCCCcccCcccCCCccccCCCccccccCC
Q 046073            1 VKETFRLHPPIPLLLSRKASEDGEIIGFIVPKGARVL----ATSRDESTWDHAHSFMPIRFLGSDVDFIGRNFESIPFGV   76 (93)
Q Consensus         1 i~E~lRl~~~~~~~~~r~~~~~~~i~g~~ip~g~~v~----~~~~~~~~~~~~~~f~p~R~~~~~~~~~~~~~~~~~fg~   76 (93)
                      ++|++|++|+++..+.|.+.+|+.++|+.||+|+.|.    ++|+|+++|+||++|+|+||++.+... ..+..++|||+
T Consensus       326 ~~Et~Rl~~~~~~~~~r~~~~~~~~~g~~ipkG~~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~-~~~~~~~~FG~  404 (463)
T d3czha1         326 LHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYF-AKKEALVPFSL  404 (463)
T ss_dssp             HHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBCTTSCB-CCCTTCCTTCC
T ss_pred             cceeeeeeccccccceecccCCcccCCcEECCCCcccCcHHHhhCCcccCCChhhcCccccCCCcccc-CCCCceeCCCC
Confidence            4799999999988788999999999999999999999    889999999999999999999876543 34557999999


Q ss_pred             CCCcCCChhhhhhcc
Q 046073           77 GRRICPDLPLDITML   91 (93)
Q Consensus        77 G~r~C~G~~~a~~e~   91 (93)
                      |+|.|+|++||++|+
T Consensus       405 G~r~C~G~~~A~~~~  419 (463)
T d3czha1         405 GRRHCLGEHLARMEM  419 (463)
T ss_dssp             STTCCTTHHHHHHHH
T ss_pred             CCcCCchHHHHHHHH
Confidence            999999999999987
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure