Citrus Sinensis ID: 046207
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 458 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SIV9 | 468 | Purple acid phosphatase 1 | yes | no | 0.978 | 0.957 | 0.681 | 0.0 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.986 | 0.969 | 0.670 | 0.0 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.975 | 0.961 | 0.682 | 0.0 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.975 | 0.959 | 0.676 | 0.0 | |
| Q09131 | 464 | Purple acid phosphatase O | yes | no | 0.951 | 0.939 | 0.694 | 0.0 | |
| Q38924 | 469 | Fe(3+)-Zn(2+) purple acid | no | no | 0.980 | 0.957 | 0.623 | 1e-173 | |
| Q9SI18 | 441 | Purple acid phosphatase 1 | no | no | 0.936 | 0.972 | 0.637 | 1e-169 | |
| Q9SE00 | 473 | Purple acid phosphatase 1 | N/A | no | 0.986 | 0.955 | 0.619 | 1e-168 | |
| P80366 | 432 | Fe(3+)-Zn(2+) purple acid | N/A | no | 0.932 | 0.988 | 0.639 | 1e-167 | |
| Q9C927 | 396 | Purple acid phosphatase 5 | no | no | 0.853 | 0.987 | 0.671 | 1e-166 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/452 (68%), Positives = 368/452 (81%), Gaps = 4/452 (0%)
Query: 8 LTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHD 65
+ L+L +LN + +CNGG+TSRYVRK E +VDMPL + F P G+NAP+QVHITQGD +
Sbjct: 12 IVLVLCCVLNSL-LCNGGITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDVE 70
Query: 66 GRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125
G++VIVSWVT + K N V +W+ NS +KHK H TY+++NY+SG+IHH I+ L+YD
Sbjct: 71 GKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEYD 130
Query: 126 TKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQA 184
TKY+Y LG G R+F F TPP++GPDVPY FG+IGDLGQ+YDSN T HY +NP KGQA
Sbjct: 131 TKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQA 190
Query: 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKP 244
VLFVGD+SYAD +P HDNRRWDSWGRF E+STAYQ WIW GNHELD+APEIGEN PFKP
Sbjct: 191 VLFVGDISYADTYPDHDNRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPFKP 250
Query: 245 YTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304
+THRY PYR+S ST P WYSIKR AYIIVL+SYSAYGKYTPQY WLE+E PKVNR ET
Sbjct: 251 FTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRTET 310
Query: 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364
PWLIVL+HSPWYNS YHYMEGE+MRV +E+WFV++KVD+V AGHVH+YER+ R SN+ Y
Sbjct: 311 PWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAY 370
Query: 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424
N+ NGI TPVKD SAPVY+TIGDGGNIEGLA + TEPQP YSA+REASFGHA+ IKNRT
Sbjct: 371 NVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGHAIFSIKNRT 430
Query: 425 HAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
HAH+ WHRNHD AV D W +NR+W+P ++
Sbjct: 431 HAHYGWHRNHDGYAVEGDRMWFYNRFWHPVDD 462
|
Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/458 (67%), Positives = 374/458 (81%), Gaps = 6/458 (1%)
Query: 5 MDLLTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDH 64
M L + L L+I + NGG+TS++VR+A PS++M L FP P G+N PEQVH+TQGDH
Sbjct: 1 MKNLVIFAFLFLSITTVINGGITSKFVRQALPSIEMSLDTFPSPGGYNTPEQVHLTQGDH 60
Query: 65 DGRSVIVSWVTP-DEKYPNVVTHWEANSKR-----KHKTHSIIKTYRYFNYSSGYIHHAT 118
DGR +IVSWVTP + NVVT+W A + K + H+ K+YR+++YSSG++HHAT
Sbjct: 61 DGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHAT 120
Query: 119 IKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVS 178
IK L+YDTKY Y++G+ + R+F FTTPPK+GPDVPY FGIIGDLGQTY SN+T HY+S
Sbjct: 121 IKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMS 180
Query: 179 NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGE 238
NPKGQAVLF GDLSYADDHP HD R+WD+WGRF+E AYQ +I+ GNHE+D+ P IGE
Sbjct: 181 NPKGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGE 240
Query: 239 NVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPK 298
FKPYTHRY Y+ASQSTSPLWYS++RASA+IIVLSSYSAYGKYTPQY WLE+EL
Sbjct: 241 PHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKN 300
Query: 299 VNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNR 358
VNR ETPWLIV++HSPWYNSN+YHYMEGESMRV FESW V KVDLV++GHVH+YER+ R
Sbjct: 301 VNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSER 360
Query: 359 FSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAML 418
SN++YNITNG+S+PVKDP+AP+Y+TIGDGGNIEG+A+ + +PQPSYSAYREASFGHA+L
Sbjct: 361 ISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFGHAVL 420
Query: 419 EIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
EI NRTHA +TWHRN DNE V ADS L NR+++P EE
Sbjct: 421 EIMNRTHAQYTWHRNQDNEPVAADSIMLHNRHFFPVEE 458
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/450 (68%), Positives = 367/450 (81%), Gaps = 3/450 (0%)
Query: 10 LLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHDGR 67
LL ++L ++ G+TS ++RK E +VDMPL + F PPG+NAP+QVHITQGDH G+
Sbjct: 10 LLAVVLAAVMNAAIAGITSSFIRKVEKTVDMPLDSDVFRVPPGYNAPQQVHITQGDHVGK 69
Query: 68 SVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127
++IVSWVT DE + V +W NS+ K I+TY YFNY+SGYIHH TI+ L+Y+TK
Sbjct: 70 AMIVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHHCTIRNLEYNTK 129
Query: 128 YFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVL 186
Y+Y++G GN TR F FTTPP+VGPDVPY FG+IGDLGQ++DSN+T HY NP KGQAVL
Sbjct: 130 YYYEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAVL 189
Query: 187 FVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYT 246
FVGDLSYAD++P HDN RWD+WGRFVE+STAYQ WIW GNHE+D+APEIGE PFKP+T
Sbjct: 190 FVGDLSYADNYPNHDNVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPFT 249
Query: 247 HRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPW 306
RYHVPY+AS ST WY IKRASAYIIVLSSYSAYGKYTPQY WLE+ELPKVNR ETPW
Sbjct: 250 KRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETPW 309
Query: 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNI 366
LIVL+HSPWYNS +YHYMEGE+MRV +E WFVQHKVDLV AGHVH+YER+ R SNV Y+I
Sbjct: 310 LIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYDI 369
Query: 367 TNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHA 426
NG TPV+D SAPVY+TIGDGGN+EGLA T+PQP YSA+REASFGHA L+IKNRTHA
Sbjct: 370 VNGKCTPVRDQSAPVYITIGDGGNLEGLATNMTDPQPEYSAFREASFGHATLDIKNRTHA 429
Query: 427 HFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
+++WHRN D AV ADS W+ NR+W+P ++
Sbjct: 430 YYSWHRNQDGYAVEADSMWVSNRFWHPVDD 459
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/452 (67%), Positives = 369/452 (81%), Gaps = 5/452 (1%)
Query: 10 LLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHDGRSV 69
LL+ + L+I + N G TS +VR A+PS +M L FP P G NAPEQVHI QGD++GR +
Sbjct: 7 LLVFVFLSIATVINSGTTSNFVRTAQPSTEMSLETFPSPAGHNAPEQVHIVQGDYNGRGI 66
Query: 70 IVSWVTP-DEKYPNVVTHWEANSK----RKHKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124
I+SWVTP + NVVT+W+A +K + H+ +YR+++Y+SG++HHATIK L+Y
Sbjct: 67 IISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFLHHATIKGLEY 126
Query: 125 DTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQA 184
DTKY Y++G+ + R+F FT+PPKVGPDVPY FGIIGDLGQT SN+T HY+SNPKGQA
Sbjct: 127 DTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYMSNPKGQA 186
Query: 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKP 244
VLF GDLSYADDHP HD R+WDSWGRFVE AYQ +I+ GNHE+D+ P IGE FKP
Sbjct: 187 VLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPHAFKP 246
Query: 245 YTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304
Y HRYH Y+AS+S SPLWYSI+RASA+IIVLSSYSAYGKYTPQY WLE+EL KVNR ET
Sbjct: 247 YIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVNREET 306
Query: 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364
PWLIV++HSPWYNSN+YHYMEGESMR FESWFV KVDLV++GHVHSYER+ R SN++Y
Sbjct: 307 PWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIKY 366
Query: 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424
NITNG+S PVKDPSAP+Y+TIGDGGNIEG+A+ +T+PQPSYSAYREASFGHA+LEI NRT
Sbjct: 367 NITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAVLEIYNRT 426
Query: 425 HAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
HA++TWHRN DNE V ADS L NRY++P EE
Sbjct: 427 HAYYTWHRNQDNEPVAADSIMLHNRYFFPVEE 458
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/439 (69%), Positives = 359/439 (81%), Gaps = 3/439 (0%)
Query: 21 ICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDE 78
+CNGG +S ++RK E +VDMPL + F PPG+NAP+QVHITQGD G++VIVSWVT DE
Sbjct: 19 MCNGGSSSPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDE 78
Query: 79 KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNAT 138
+ V +W NS +K + TYR+FNYSSG+IHH TI+ L+Y TKY+Y++G GN T
Sbjct: 79 PGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTT 138
Query: 139 RRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYADDH 197
R+F F TPP++GPDVPY FG+IGDLGQ++DSN+T HY NP KGQ VLFVGDLSYAD++
Sbjct: 139 RQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNY 198
Query: 198 PQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQ 257
P HDN RWDSWGRF E+S AYQ WIW GNHE +APEIGE VPFKPYTHRYHVPY+ASQ
Sbjct: 199 PNHDNIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYKASQ 258
Query: 258 STSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYN 317
STSP WYSIKRASA+IIVL+SYSAYGKYTPQY WLEKELPKVNR ETPWLIVL+HSPWYN
Sbjct: 259 STSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYN 318
Query: 318 SNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDP 377
S +YHYMEGE+MRV +E WFVQ+KVD+V AGHVH+YER+ R SNV YNI NG+ PV D
Sbjct: 319 SYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDK 378
Query: 378 SAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNE 437
SAPVY+TIGDGG +EGLA TEPQP YSA+REASFGHA+ +I NRTHAH++WHRN D
Sbjct: 379 SAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDGV 438
Query: 438 AVVADSQWLFNRYWYPEEE 456
AV ADS W FNRYW+P ++
Sbjct: 439 AVEADSLWSFNRYWHPVDD 457
|
Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q38924|PPA12_ARATH Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 609 bits (1571), Expect = e-173, Method: Compositional matrix adjust.
Identities = 282/452 (62%), Positives = 350/452 (77%), Gaps = 3/452 (0%)
Query: 8 LTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHD 65
++L++ LL +V C GG TS YVR ++ DMPL + F PPG N+P+QVH+TQG+H+
Sbjct: 12 VSLIIFLLSVLVEFCYGGFTSEYVRGSDLPDDMPLDSDVFEVPPGPNSPQQVHVTQGNHE 71
Query: 66 GRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125
G VI+SWVTP + V +W N K + + + + TYR+FNY+SGYIHH I L++D
Sbjct: 72 GNGVIISWVTPVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFD 131
Query: 126 TKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQA 184
TKY+Y++GSG +RRF F PPK GPDVPY FG+IGDLGQTYDSN T HY NP KGQA
Sbjct: 132 TKYYYEIGSGKWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQA 191
Query: 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKP 244
VLFVGDLSYAD +P HDN RWD+WGRFVE+S AYQ WIW GNHE+D+ P+IGE PFKP
Sbjct: 192 VLFVGDLSYADRYPNHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKP 251
Query: 245 YTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304
+ +RYH P++AS S SPLWYSIKRASAYIIV+S YS+YG YTPQY WLEKEL VNR ET
Sbjct: 252 FMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTET 311
Query: 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364
PWLIVL+HSP+Y+S +HYMEGE++RV +E WFV++KVD+V AGHVH+YER+ R SN+ Y
Sbjct: 312 PWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIAY 371
Query: 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424
NI NG+ P+ D SAP+Y+TIGDGGN EGL +PQP YSA+REASFGH +LEIKNRT
Sbjct: 372 NIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRT 431
Query: 425 HAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
HA+F+W+RN D AV ADS WL NR+W +++
Sbjct: 432 HAYFSWNRNQDGNAVAADSVWLLNRFWRAQKK 463
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SI18|PPA11_ARATH Purple acid phosphatase 11 OS=Arabidopsis thaliana GN=PAP11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 594 bits (1532), Expect = e-169, Method: Compositional matrix adjust.
Identities = 288/452 (63%), Positives = 345/452 (76%), Gaps = 23/452 (5%)
Query: 8 LTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHDGR 67
L + +I + G+TS + R +EPS +M L FPPP G+NAPEQVHITQGD+ GR
Sbjct: 8 LVCAAIAFSSIFVVSQAGITSTHARVSEPSEEMSLETFPPPAGYNAPEQVHITQGDNAGR 67
Query: 68 SVIVSWVTP-DEKYPNVVTHWEANSKRKHKTHSIIKT--YRYFNYSSGYIHHATIKRLKY 124
++I+SWV P +E NVVT+W A+S ++I T YRYFNY+SGY+HHATIK+L+Y
Sbjct: 68 AMIISWVMPLNEDGSNVVTYWIASSDGSDNKNAIATTSSYRYFNYTSGYLHHATIKKLEY 127
Query: 125 DTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQA 184
D P K DLGQTY SNQT +Y+SNPKGQA
Sbjct: 128 D--------------------PSKSRSRCSLHIRYYSDLGQTYASNQTLYNYMSNPKGQA 167
Query: 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKP 244
VLFVGDLSYADDHP HD R+WDS+GRFVE S AYQ W W GN+E+DYA I E PFKP
Sbjct: 168 VLFVGDLSYADDHPNHDQRKWDSYGRFVEPSAAYQPWSWAAGNYEIDYAQSISETQPFKP 227
Query: 245 YTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304
Y +RYHVPY+ASQSTSPLWYSIKRAS YIIVLSSYSAY KYTPQ +WL+ EL KVNR+ET
Sbjct: 228 YKNRYHVPYKASQSTSPLWYSIKRASTYIIVLSSYSAYDKYTPQNSWLQDELKKVNRSET 287
Query: 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364
WLIVL+H+PWYNSN+YHYMEGESMRV FE WFV++KVD+V AGHVH+YER+ R SN+ Y
Sbjct: 288 SWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVENKVDIVFAGHVHAYERSKRISNIHY 347
Query: 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424
NIT+G+STPVKD +AP+Y+TIGDGGNIEG+A+ +T+PQPSYSA+REASFGHA+LEIKNRT
Sbjct: 348 NITDGMSTPVKDQNAPIYITIGDGGNIEGIANSFTDPQPSYSAFREASFGHALLEIKNRT 407
Query: 425 HAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
HAH+TWHRN ++EAV+ADS WL RY+ PEEE
Sbjct: 408 HAHYTWHRNKEDEAVIADSIWLKKRYYLPEEE 439
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SE00|PPAF1_IPOBA Purple acid phosphatase 1 OS=Ipomoea batatas GN=PAP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 592 bits (1527), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/462 (61%), Positives = 346/462 (74%), Gaps = 10/462 (2%)
Query: 4 TMDLLTLLLLLLLNIVGICNGGVTSRYVRKA------EPSVDMPLAA--FPPPPGFNAPE 55
+ L L+L L+LN C+ GVTS YVRK+ VDMP + F P G+NAP+
Sbjct: 5 VVGLWCLILGLILNPTKFCDAGVTSSYVRKSLSALPNAEDVDMPWDSDVFAVPSGYNAPQ 64
Query: 56 QVHITQGDHDGRSVIVSWVTP-DEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYI 114
QVHITQGD++GR VI+SW TP D+ N V +W NSK + + + TY+Y+NY+S +I
Sbjct: 65 QVHITQGDYEGRGVIISWTTPYDKAGANKVVYWSENSKSQKRAMGTVVTYKYYNYTSAFI 124
Query: 115 HHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFE 174
HH TIK L+YDTKY+Y+LG G+A R+F F TPPK GPDVPY+FG+IGD+GQT+DSN T
Sbjct: 125 HHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLT 184
Query: 175 HYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYA 233
HY N KGQAVLF+GDLSY++ P HDN RWD+WGRF E+S AYQ WIW GNHE+DYA
Sbjct: 185 HYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYA 244
Query: 234 PEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLE 293
P+IGE PF P+T+RY P+ AS S PLWY+IKRASA+IIVLSSYS + KY+PQY W
Sbjct: 245 PDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFT 304
Query: 294 KELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSY 353
EL KVNR+ETPWLIVL+H+P YNS HYMEGE+MR FE +FV +KVD+V +GHVHSY
Sbjct: 305 SELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSY 364
Query: 354 ERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASF 413
ER+ R SNV YNI N TPV D SAPVY+TIGDGGN EGLA T+PQPSYSA+REASF
Sbjct: 365 ERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASF 424
Query: 414 GHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPEE 455
GH + +IKNRTHAHF+WHRN D +V ADS WL NRYW E+
Sbjct: 425 GHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYWASED 466
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P80366|PPAF_PHAVU Fe(3+)-Zn(2+) purple acid phosphatase OS=Phaseolus vulgaris PE=1 SV=2 | Back alignment and function description |
|---|
Score = 588 bits (1515), Expect = e-167, Method: Compositional matrix adjust.
Identities = 275/430 (63%), Positives = 338/430 (78%), Gaps = 3/430 (0%)
Query: 30 YVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHW 87
+VRK + DMPL + F PPG+NAP+QVHITQGD GR++I+SWVT DE + V +W
Sbjct: 1 FVRKTNKNRDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYW 60
Query: 88 EANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPP 147
+ RK + TYR+FNYSSG+IHH TI++LKY+TKY+Y++G N TRRF F TPP
Sbjct: 61 SEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 120
Query: 148 KVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPK-GQAVLFVGDLSYADDHPQHDNRRWD 206
+ G DVPY FG+IGDLGQ++DSN T HY +PK GQ VLFVGDLSYAD +P HDN RWD
Sbjct: 121 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWD 180
Query: 207 SWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSI 266
+WGRF E+S AYQ WIW GNHE+++APEI E PFKP+++RYHVPY ASQSTSP WYSI
Sbjct: 181 TWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSI 240
Query: 267 KRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEG 326
KRASA+IIVLSS+ AYG+ TPQY WL+KEL KV R+ETPWLIVL+HSP YNS ++H+MEG
Sbjct: 241 KRASAHIIVLSSHIAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEG 300
Query: 327 ESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIG 386
E+MR FE+WFV++KVD+V AGHVH+YER+ R SN+ Y IT+G+ TPVKD SAPVY+TIG
Sbjct: 301 EAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITIG 360
Query: 387 DGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWL 446
D GN + +PQP YSA+REASFGH M +IKNRTHAHF+W+RN D AV ADS W
Sbjct: 361 DAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWF 420
Query: 447 FNRYWYPEEE 456
FNR+WYP ++
Sbjct: 421 FNRHWYPVDD 430
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C927|PPA5_ARATH Purple acid phosphatase 5 OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 585 bits (1508), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/420 (67%), Positives = 333/420 (79%), Gaps = 29/420 (6%)
Query: 40 MPLAAFPPPPGFNAPEQVHITQGDHDGRSVIVSWVTP-DEKYPNVVTHWEANSKRKHKTH 98
M L FPPP G+NAPEQVHITQGDH+GR +I+SWVT +E NVVT+W A+S
Sbjct: 1 MSLETFPPPAGYNAPEQVHITQGDHNGRGMIISWVTSLNEDGSNVVTYWIASSDGSDNKS 60
Query: 99 SIIKT--YRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYI 156
I T YRYF+Y+SGY+HHA IK L+Y TKYFY+LG+G +TR+F+ T PPKVGPDVPY
Sbjct: 61 VIATTSSYRYFDYTSGYLHHAIIKELEYKTKYFYELGTGRSTRQFNLT-PPKVGPDVPYT 119
Query: 157 FGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST 216
FG+IGDLGQTY SNQT +Y+SNPKGQAVLF GDLSYADDHP HD +WDS+GRFVE S
Sbjct: 120 FGVIGDLGQTYASNQTLYNYMSNPKGQAVLFAGDLSYADDHPNHDQSKWDSYGRFVEPSA 179
Query: 217 AYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVL 276
AYQ WIW GNHE+DYA IGE PFKPY +RYHVPYRASQ+
Sbjct: 180 AYQPWIWAAGNHEIDYAQSIGETQPFKPYKNRYHVPYRASQN------------------ 221
Query: 277 SSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESW 336
KYTPQ +WL+ E KVNR+ETPWLIVL+H+PWYNSN+YHYMEGESMRV FE W
Sbjct: 222 -------KYTPQNSWLQDEFKKVNRSETPWLIVLVHAPWYNSNNYHYMEGESMRVTFEPW 274
Query: 337 FVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLAD 396
FV++KVD+V AGHVH+YER+ R SN+QYNIT+G+STPVKD +APVY+TIGDGGNIEG+A+
Sbjct: 275 FVENKVDIVFAGHVHAYERSERVSNIQYNITDGMSTPVKDQNAPVYITIGDGGNIEGIAN 334
Query: 397 RYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
+T+PQPSYSA+REASFGHA+LEIKNRTHAH+TWHRN ++EAV+ADS WL NRY+ PEEE
Sbjct: 335 IFTDPQPSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSIWLKNRYYLPEEE 394
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 458 | ||||||
| 255587098 | 461 | Purple acid phosphatase precursor, putat | 0.980 | 0.973 | 0.756 | 0.0 | |
| 449464522 | 459 | PREDICTED: purple acid phosphatase 10-li | 0.949 | 0.947 | 0.752 | 0.0 | |
| 449524526 | 459 | PREDICTED: LOW QUALITY PROTEIN: purple a | 0.949 | 0.947 | 0.750 | 0.0 | |
| 297836534 | 461 | ATPAP11/PAP11 [Arabidopsis lyrata subsp. | 0.980 | 0.973 | 0.712 | 0.0 | |
| 225427698 | 472 | PREDICTED: purple acid phosphatase 2 iso | 0.980 | 0.951 | 0.690 | 0.0 | |
| 225427706 | 472 | PREDICTED: purple acid phosphatase 2 iso | 0.980 | 0.951 | 0.685 | 0.0 | |
| 225427696 | 471 | PREDICTED: purple acid phosphatase 2 [Vi | 0.986 | 0.959 | 0.687 | 0.0 | |
| 359806067 | 464 | uncharacterized protein LOC100807555 pre | 0.975 | 0.963 | 0.693 | 0.0 | |
| 297798274 | 466 | ATPAP25/PAP25 [Arabidopsis lyrata subsp. | 0.975 | 0.959 | 0.685 | 0.0 | |
| 15227205 | 468 | purple acid phosphatase 10 [Arabidopsis | 0.978 | 0.957 | 0.681 | 0.0 |
| >gi|255587098|ref|XP_002534135.1| Purple acid phosphatase precursor, putative [Ricinus communis] gi|223525807|gb|EEF28252.1| Purple acid phosphatase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/451 (75%), Positives = 387/451 (85%), Gaps = 2/451 (0%)
Query: 10 LLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHDGRSV 69
L+ LL LNI G C GG+TS+YVRK + S D+P+ +FPPP NAPEQVHITQGDH GRSV
Sbjct: 5 LVFLLFLNIAGSCYGGITSQYVRKVQASDDLPIESFPPPSEDNAPEQVHITQGDHIGRSV 64
Query: 70 IVSWVTPDEKYPNVVTHW--EANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127
I+SWVTP +++PN VT+W E K KHK H++ YRY+NY+SGYIHHATIKRL+YDTK
Sbjct: 65 IISWVTPLDRFPNTVTYWAAEGKHKHKHKAHAVTTFYRYYNYTSGYIHHATIKRLQYDTK 124
Query: 128 YFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLF 187
YFY+LGS RRF FTTPP+VGPDVPY FGI+GDLGQT DSN T EHYVSNP Q +LF
Sbjct: 125 YFYELGSHKTARRFSFTTPPEVGPDVPYTFGIMGDLGQTSDSNITLEHYVSNPSAQTMLF 184
Query: 188 VGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTH 247
VGDLSYADDHP HD+ RWD+WGRF EKSTAYQ WIW GNHE+D+APEI EN PFKPY H
Sbjct: 185 VGDLSYADDHPFHDSVRWDTWGRFTEKSTAYQPWIWTAGNHEIDFAPEIDENTPFKPYLH 244
Query: 248 RYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWL 307
RYHVP++ASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQY WL++E K+NRAETPWL
Sbjct: 245 RYHVPFKASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYNWLQQEFKKINRAETPWL 304
Query: 308 IVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNIT 367
IVLLHSPWYNSNSYHYMEGESMRV FE WFV++KVDLV AGHVHSYER+ R SNV+YNIT
Sbjct: 305 IVLLHSPWYNSNSYHYMEGESMRVMFEPWFVENKVDLVFAGHVHSYERSERISNVRYNIT 364
Query: 368 NGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAH 427
NG+S P+KD SAP+Y+TIGDGGNIEGLAD +TEPQPSYSA+REASFGHA+LEIKNR+HA
Sbjct: 365 NGLSAPLKDSSAPIYITIGDGGNIEGLADSFTEPQPSYSAFREASFGHAILEIKNRSHAC 424
Query: 428 FTWHRNHDNEAVVADSQWLFNRYWYPEEEHC 458
+TWHRN D+EAV AD W++NRYWYPEEE
Sbjct: 425 YTWHRNQDDEAVAADFLWIYNRYWYPEEEQS 455
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449464522|ref|XP_004149978.1| PREDICTED: purple acid phosphatase 10-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/437 (75%), Positives = 387/437 (88%), Gaps = 2/437 (0%)
Query: 22 CNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYP 81
+GG+TSR++RK E S+DMP AFPPP G NAPEQVHITQGD +G+ VI+SW+TP P
Sbjct: 20 THGGITSRFMRKLEASLDMPAEAFPPPSGHNAPEQVHITQGDRNGKGVIISWLTPLSPKP 79
Query: 82 NVVTHWEANSKRKH--KTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNATR 139
NVV +W A+S +H K S I TY+Y+NY+SGYIHHATI L+YDTKYFY++GSG+ATR
Sbjct: 80 NVVRYWAADSDEEHDHKVRSRITTYKYYNYTSGYIHHATINDLQYDTKYFYEIGSGDATR 139
Query: 140 RFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQ 199
RF FTTPP VGPDVPYIFGIIGDLGQTYDSNQTFEHY SN KGQAVLFVGDLSYAD+HP
Sbjct: 140 RFFFTTPPMVGPDVPYIFGIIGDLGQTYDSNQTFEHYYSNSKGQAVLFVGDLSYADNHPF 199
Query: 200 HDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQST 259
HDNR+WD+WGRFVEKSTAYQ WIW GNHE+D+APEIGEN PFKP+THRYHVPY+ +QS+
Sbjct: 200 HDNRKWDTWGRFVEKSTAYQPWIWTAGNHEMDFAPEIGENTPFKPFTHRYHVPYKTAQSS 259
Query: 260 SPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSN 319
SPLWYSIKRASAYIIVLSSYSAYG YTPQY WL+ E KVNR ETPWLIV++HSPWYNS
Sbjct: 260 SPLWYSIKRASAYIIVLSSYSAYGTYTPQYQWLQNEFTKVNREETPWLIVMVHSPWYNSY 319
Query: 320 SYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSA 379
+YHYMEGESMRV FESWFV++KVDLV++GHVH+YER+ R SNV+YNITN +S+P++D +A
Sbjct: 320 NYHYMEGESMRVMFESWFVENKVDLVLSGHVHAYERSERVSNVRYNITNRLSSPIRDINA 379
Query: 380 PVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAV 439
P+Y+TIGDGGNIEGLA+++TEPQP+YSA+REASFGHA+LEIKNRTHA++TWHRNHDNE V
Sbjct: 380 PMYITIGDGGNIEGLANQFTEPQPNYSAFREASFGHALLEIKNRTHAYYTWHRNHDNEPV 439
Query: 440 VADSQWLFNRYWYPEEE 456
ADS W++NR+WYPE+E
Sbjct: 440 AADSLWIYNRFWYPEDE 456
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449524526|ref|XP_004169273.1| PREDICTED: LOW QUALITY PROTEIN: purple acid phosphatase 10-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/437 (75%), Positives = 386/437 (88%), Gaps = 2/437 (0%)
Query: 22 CNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYP 81
+GG+TSR++RK E S+DMP AFP P G NAPEQVHITQGD +G+ VI+SW+TP P
Sbjct: 20 THGGITSRFMRKLEASLDMPAEAFPXPSGHNAPEQVHITQGDRNGKGVIISWLTPLSPKP 79
Query: 82 NVVTHWEANSKRKH--KTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNATR 139
NVV +W A+S +H K S I TY+Y+NY+SGYIHHATI L+YDTKYFY++GSG+ATR
Sbjct: 80 NVVRYWAADSDEEHDHKVRSRITTYKYYNYTSGYIHHATINDLQYDTKYFYEIGSGDATR 139
Query: 140 RFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQ 199
RF FTTPP VGPDVPYIFGIIGDLGQTYDSNQTFEHY SN KGQAVLFVGDLSYAD+HP
Sbjct: 140 RFFFTTPPMVGPDVPYIFGIIGDLGQTYDSNQTFEHYYSNSKGQAVLFVGDLSYADNHPF 199
Query: 200 HDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQST 259
HDNR+WD+WGRFVEKSTAYQ WIW GNHE+D+APEIGEN PFKP+THRYHVPY+ +QS+
Sbjct: 200 HDNRKWDTWGRFVEKSTAYQPWIWTAGNHEMDFAPEIGENTPFKPFTHRYHVPYKTAQSS 259
Query: 260 SPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSN 319
SPLWYSIKRASAYIIVLSSYSAYG YTPQY WL+ E KVNR ETPWLIV++HSPWYNS
Sbjct: 260 SPLWYSIKRASAYIIVLSSYSAYGTYTPQYQWLQNEFTKVNREETPWLIVMVHSPWYNSY 319
Query: 320 SYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSA 379
+YHYMEGESMRV FESWFV++KVDLV++GHVH+YER+ R SNV+YNITN +S+P++D +A
Sbjct: 320 NYHYMEGESMRVMFESWFVENKVDLVLSGHVHAYERSERVSNVRYNITNRLSSPIRDINA 379
Query: 380 PVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAV 439
P+Y+TIGDGGNIEGLA+++TEPQP+YSA+REASFGHA+LEIKNRTHA++TWHRNHDNE V
Sbjct: 380 PMYITIGDGGNIEGLANQFTEPQPNYSAFREASFGHALLEIKNRTHAYYTWHRNHDNEPV 439
Query: 440 VADSQWLFNRYWYPEEE 456
ADS W++NR+WYPE+E
Sbjct: 440 AADSLWIYNRFWYPEDE 456
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297836534|ref|XP_002886149.1| ATPAP11/PAP11 [Arabidopsis lyrata subsp. lyrata] gi|297331989|gb|EFH62408.1| ATPAP11/PAP11 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/452 (71%), Positives = 383/452 (84%), Gaps = 3/452 (0%)
Query: 8 LTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHDGR 67
L +++L++I + +GGVTS YVR +EPS +MPL FPPP G+NAPEQVHITQGDH GR
Sbjct: 8 LVCYVVVLISIFSVTHGGVTSNYVRVSEPSEEMPLETFPPPAGYNAPEQVHITQGDHSGR 67
Query: 68 SVIVSWVTP-DEKYPNVVTHWEANSKRKHKTHSIIKT--YRYFNYSSGYIHHATIKRLKY 124
+I+SWVTP +E NVVT+W A +I T YRYF+Y+S Y+HHATIK L+Y
Sbjct: 68 GMIISWVTPLNEDGSNVVTYWIAGGDGTDNKSAIATTSSYRYFDYTSNYLHHATIKGLEY 127
Query: 125 DTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQA 184
+TKYFY+LG+G +TR+F+F TPPKVGPDVPY FG+IGDLGQTY SNQT +Y+SNPKGQA
Sbjct: 128 ETKYFYELGTGRSTRQFNFMTPPKVGPDVPYTFGVIGDLGQTYASNQTLYNYMSNPKGQA 187
Query: 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKP 244
VLF GDLSYADDHP HD R+WDS+GRFVE S AYQ WIW GNHE+DYA IGE PFKP
Sbjct: 188 VLFAGDLSYADDHPNHDQRKWDSYGRFVEPSAAYQPWIWAAGNHEIDYAQSIGETQPFKP 247
Query: 245 YTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304
Y HRYHVP++ASQSTSPLWYSIKRASAYIIVLSSYSAY KYTPQ +WL+ EL KVNR+ET
Sbjct: 248 YMHRYHVPHKASQSTSPLWYSIKRASAYIIVLSSYSAYDKYTPQNSWLQDELKKVNRSET 307
Query: 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364
PWLIVL+H+PWYNSN+YHYMEGESMRV FE WFV++KVD+V AGHVH+YER+ R SN++Y
Sbjct: 308 PWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVENKVDIVFAGHVHAYERSERVSNIKY 367
Query: 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424
NIT+G+STPVKD +APVY+TIGDGGNIEG+A+ +T+PQPSYSA+REASFGHA+LEIKNRT
Sbjct: 368 NITDGLSTPVKDQNAPVYITIGDGGNIEGIANSFTDPQPSYSAFREASFGHALLEIKNRT 427
Query: 425 HAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
HAH+TWHRN D+E V+AD+ WL NRY+ PEEE
Sbjct: 428 HAHYTWHRNKDDEPVIADAIWLKNRYYLPEEE 459
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225427698|ref|XP_002263937.1| PREDICTED: purple acid phosphatase 2 isoform 1 [Vitis vinifera] gi|297744760|emb|CBI38022.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/452 (69%), Positives = 375/452 (82%), Gaps = 3/452 (0%)
Query: 8 LTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHD 65
+ ++L +LN +C+GG+TS +VRK E ++DMPL + F P G+NAP+QVHITQGDH+
Sbjct: 15 VVIVLGSVLNAAVVCHGGITSSFVRKVEKTIDMPLDSDVFRVPLGYNAPQQVHITQGDHE 74
Query: 66 GRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125
GR VIVSWVT DE N V +W NSKRK++ I+ TY+++NY+SGYIHH TIK L+++
Sbjct: 75 GRGVIVSWVTVDEPGSNTVLYWSENSKRKNRAEGIMVTYKFYNYTSGYIHHCTIKNLEFN 134
Query: 126 TKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQA 184
TKY+Y +G G+ R+F F TPPKVGPDVPY FG+IGDLGQ+YDSN T HY NP KG+
Sbjct: 135 TKYYYVVGIGHTPRKFWFVTPPKVGPDVPYTFGLIGDLGQSYDSNMTLTHYELNPAKGKT 194
Query: 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKP 244
VLFVGDLSYAD++P HDN RWD+WGRF E+STAYQ WIW GNHE+D+ PEIGE +PFKP
Sbjct: 195 VLFVGDLSYADNYPNHDNVRWDTWGRFTERSTAYQPWIWTAGNHEIDFVPEIGEFIPFKP 254
Query: 245 YTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304
Y+HRYHVPYRAS ST+P WYSIKRASAYIIVL+SYSAYGKYTPQY WLEKELPKVNR+ET
Sbjct: 255 YSHRYHVPYRASDSTAPFWYSIKRASAYIIVLASYSAYGKYTPQYKWLEKELPKVNRSET 314
Query: 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364
PWLIVL+HSPWYNS +YHYMEGE+MRV +E WFVQ+KVD+V AGHVH+YER+ R SN+ Y
Sbjct: 315 PWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNIAY 374
Query: 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424
N+ NGI TPV D SAPVY+TIGDGGN+EGLA TEPQP YSAYREASFGHA+ +IKNRT
Sbjct: 375 NVINGICTPVNDQSAPVYITIGDGGNLEGLATNMTEPQPKYSAYREASFGHAIFDIKNRT 434
Query: 425 HAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
HAH++WHRN D AV ADS W FNR+W+PE++
Sbjct: 435 HAHYSWHRNQDGYAVKADSLWFFNRFWHPEDD 466
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225427706|ref|XP_002264113.1| PREDICTED: purple acid phosphatase 2 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/452 (68%), Positives = 373/452 (82%), Gaps = 3/452 (0%)
Query: 8 LTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHD 65
+ ++L L+LN +C+GG+TS +VRK E ++DMPL + F P G+NAP+QVHITQGDH+
Sbjct: 15 VVIVLGLVLNAAVVCHGGITSSFVRKVEKTIDMPLDSDVFRVPLGYNAPQQVHITQGDHE 74
Query: 66 GRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125
GR VIVSWVT DE N V +W SKRK++ I+ TY+++NY+SGYIHH TIK L+++
Sbjct: 75 GRGVIVSWVTVDEPGSNTVLYWSEKSKRKNRAEGIMVTYKFYNYTSGYIHHCTIKNLEFN 134
Query: 126 TKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQA 184
TKY+Y +G G+ R+F F TPPKVGPDVPY FG+IGDLGQ+YDSN T HY NP KG+
Sbjct: 135 TKYYYVVGIGHTPRKFWFVTPPKVGPDVPYTFGLIGDLGQSYDSNMTLTHYELNPAKGKT 194
Query: 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKP 244
VLFVGDLSYAD +P +DN RWD+WGRF E+STAYQ WIW GNHE+D+APEIGE +PFKP
Sbjct: 195 VLFVGDLSYADRYPNYDNVRWDTWGRFTERSTAYQPWIWTAGNHEIDFAPEIGEFIPFKP 254
Query: 245 YTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304
Y+HRYHVPYRAS ST+P WYSIKRASAYIIVLSSYSAYGKYTPQ+ WLEKELPKVNR+ET
Sbjct: 255 YSHRYHVPYRASDSTAPFWYSIKRASAYIIVLSSYSAYGKYTPQFMWLEKELPKVNRSET 314
Query: 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364
PWLIVL+HSPWYNS +YHYMEGE+MRV +E WFVQ+KVD+V AGHVH+YER+ R SN+ Y
Sbjct: 315 PWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNIAY 374
Query: 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424
N+ NGI TPV D SAPVY+TIGDGGN+EGLA TEPQP YSAYREASFGHA+ + KNRT
Sbjct: 375 NVINGICTPVNDQSAPVYITIGDGGNLEGLATNMTEPQPKYSAYREASFGHAIFDTKNRT 434
Query: 425 HAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
HA ++WHRN D AV ADS W FNR+W+PE++
Sbjct: 435 HAQYSWHRNQDGYAVKADSLWFFNRFWHPEDD 466
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225427696|ref|XP_002274392.1| PREDICTED: purple acid phosphatase 2 [Vitis vinifera] gi|297744761|emb|CBI38023.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/455 (68%), Positives = 376/455 (82%), Gaps = 3/455 (0%)
Query: 5 MDLLTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQG 62
+ ++ +L L LN +CNGG+TS +VR+AE SVDMPL + F PPG+NAP+QVHITQG
Sbjct: 13 VGIVFAVLGLALNAAVLCNGGITSSFVRQAEKSVDMPLDSDVFAEPPGYNAPQQVHITQG 72
Query: 63 DHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRL 122
DH G++VIVSWVT E N V +W SK K + + + TY+Y+NY+SGYIHH TI+ L
Sbjct: 73 DHSGKAVIVSWVTMAEPGSNTVLYWSEKSKVKMQAEASVVTYKYYNYASGYIHHCTIRNL 132
Query: 123 KYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-K 181
++DTKY+Y++GSG+ R+F F TPP+VGPDVPY FG+IGDLGQTYDSN T HY NP K
Sbjct: 133 EFDTKYYYEVGSGHVRRKFWFVTPPEVGPDVPYTFGLIGDLGQTYDSNMTLTHYELNPAK 192
Query: 182 GQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVP 241
G+ VL+VGDLSYAD++P HDN RWD+WGRFVE+S AYQ WIW GNHE+D+APEIGE P
Sbjct: 193 GKTVLYVGDLSYADNYPNHDNVRWDTWGRFVERSAAYQPWIWTTGNHEIDFAPEIGEFEP 252
Query: 242 FKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNR 301
FKP+THRY VP+RAS STSP WYS+KRASAYIIVL+SYSAYGKYTPQY WL++ELPKVNR
Sbjct: 253 FKPFTHRYPVPFRASDSTSPSWYSVKRASAYIIVLASYSAYGKYTPQYEWLQQELPKVNR 312
Query: 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSN 361
ETPWLIVL+HSPWYNS +YHYMEGE+MRV FESWFV++KVD+V AGHVH+YER+ R SN
Sbjct: 313 TETPWLIVLVHSPWYNSYNYHYMEGETMRVMFESWFVEYKVDVVFAGHVHAYERSERVSN 372
Query: 362 VQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIK 421
+ YNI NG+ TPVKD SAPVY+TIGDGGNIEGLA+ TEPQP+YSAYREASFGHA +IK
Sbjct: 373 IAYNIINGMCTPVKDQSAPVYITIGDGGNIEGLANNMTEPQPNYSAYREASFGHASFDIK 432
Query: 422 NRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
NRTHA+++WHRN D AV ADS W FNRYW+P +E
Sbjct: 433 NRTHAYYSWHRNEDGYAVEADSMWFFNRYWHPVDE 467
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359806067|ref|NP_001240926.1| uncharacterized protein LOC100807555 precursor [Glycine max] gi|304421394|gb|ADM32496.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/450 (69%), Positives = 370/450 (82%), Gaps = 3/450 (0%)
Query: 10 LLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHDGR 67
L L L+LN+ +CNGG +S +VRK E +VDMPL + F PPG+NAP+QVHITQGD G+
Sbjct: 8 LALGLILNVCVVCNGGTSSPFVRKVEKAVDMPLDSDVFAIPPGYNAPQQVHITQGDLVGK 67
Query: 68 SVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127
+VIVSWVT DE + V +W NS +K + TYR+FNY+SG+IHH TI+ L+Y+TK
Sbjct: 68 AVIVSWVTVDEPGSSEVRYWSENSDQKKIVEGKLVTYRFFNYTSGFIHHTTIRNLEYNTK 127
Query: 128 YFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVL 186
Y+Y++G GN TR+F F TPP++GPDVPY FG+IGDLGQ++DSN+T HY NP KGQ VL
Sbjct: 128 YYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVL 187
Query: 187 FVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYT 246
FVGDLSYAD++P HDN RWDSWGRF E+S AYQ WIW GNHE+D+APEIGE VPFKPYT
Sbjct: 188 FVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYT 247
Query: 247 HRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPW 306
HRYHVPY+ASQSTSP WYSIKRASA+IIVL+SYSAYGKYTPQY WLEKELPKVNR ETPW
Sbjct: 248 HRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPW 307
Query: 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNI 366
LIVL+HSPWYNS +YHYMEGE+MRV +E WFVQ+KVD+V AGHVH+YER+ R SNV YNI
Sbjct: 308 LIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNI 367
Query: 367 TNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHA 426
NG+ PV D SAPVY+TIGDGGN+EGLA TEPQP YSA+REASFGHA+ +I NRTHA
Sbjct: 368 VNGLCAPVNDKSAPVYITIGDGGNLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHA 427
Query: 427 HFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
H++WHRN D AV ADS W FNRYW+P ++
Sbjct: 428 HYSWHRNQDGVAVEADSLWFFNRYWHPVDD 457
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297798274|ref|XP_002867021.1| ATPAP25/PAP25 [Arabidopsis lyrata subsp. lyrata] gi|297312857|gb|EFH43280.1| ATPAP25/PAP25 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/452 (68%), Positives = 376/452 (83%), Gaps = 5/452 (1%)
Query: 10 LLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHDGRSV 69
+L+L+ L+I + NGG TS++ RKA+PS +MPL FP P G NAPEQVHI QGD++GR +
Sbjct: 7 ILVLVFLSITTVINGGTTSKFFRKAQPSTEMPLKTFPSPAGHNAPEQVHIIQGDYNGRGM 66
Query: 70 IVSWVTP-DEKYPNVVTHWEANS----KRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124
I+SWVTP + NVVT+W+A S K + H+ +YR+++Y+SG++HHATIK LKY
Sbjct: 67 IISWVTPLNLAGSNVVTYWKAVSGDVKSEKKRAHASTSSYRFYDYTSGFLHHATIKGLKY 126
Query: 125 DTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQA 184
DTKY Y++G+ + R+F FTTPPKVGPDVPY FGIIGDLGQTY SN+T HY+SNPKGQA
Sbjct: 127 DTKYIYEVGTDESVRQFSFTTPPKVGPDVPYTFGIIGDLGQTYASNETLYHYMSNPKGQA 186
Query: 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKP 244
VLF GDLSYADDHP HD R+WDSWGRFVE AYQ +I+ GNHE+D+ P IGE FKP
Sbjct: 187 VLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQPFIYAAGNHEIDFVPNIGEPHAFKP 246
Query: 245 YTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304
YTHRYH Y+AS+STSPLWYSI+RASA+IIVLSSYSAYGKYTPQY WL++EL KVNR ET
Sbjct: 247 YTHRYHNAYKASKSTSPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLDQELKKVNREET 306
Query: 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364
PWLIV++HSPWYNSN+YHYMEGESMR FESWFV KVDLV++GHVHSYER+ R SN++Y
Sbjct: 307 PWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIKY 366
Query: 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424
NITNG+S+PVKDPSAP+Y+TIGDGGNIEG+A+ +T+PQPSYSAYREASFGHA+L+I N+T
Sbjct: 367 NITNGLSSPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAVLQIFNKT 426
Query: 425 HAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
HA +TWHRN DNE + ADS L NRY++P EE
Sbjct: 427 HAFYTWHRNQDNEPIAADSIMLHNRYFFPVEE 458
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15227205|ref|NP_179235.1| purple acid phosphatase 10 [Arabidopsis thaliana] gi|75265912|sp|Q9SIV9.1|PPA10_ARATH RecName: Full=Purple acid phosphatase 10; Flags: Precursor gi|20257483|gb|AAM15911.1|AF492662_1 purple acid phosphatase [Arabidopsis thaliana] gi|4544387|gb|AAD22297.1| putative purple acid phosphatase precursor [Arabidopsis thaliana] gi|20260674|gb|AAM13235.1| putative purple acid phosphatase precursor [Arabidopsis thaliana] gi|31376393|gb|AAP49523.1| At2g16430 [Arabidopsis thaliana] gi|330251402|gb|AEC06496.1| purple acid phosphatase 10 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/452 (68%), Positives = 368/452 (81%), Gaps = 4/452 (0%)
Query: 8 LTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHD 65
+ L+L +LN + +CNGG+TSRYVRK E +VDMPL + F P G+NAP+QVHITQGD +
Sbjct: 12 IVLVLCCVLNSL-LCNGGITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDVE 70
Query: 66 GRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125
G++VIVSWVT + K N V +W+ NS +KHK H TY+++NY+SG+IHH I+ L+YD
Sbjct: 71 GKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEYD 130
Query: 126 TKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQA 184
TKY+Y LG G R+F F TPP++GPDVPY FG+IGDLGQ+YDSN T HY +NP KGQA
Sbjct: 131 TKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQA 190
Query: 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKP 244
VLFVGD+SYAD +P HDNRRWDSWGRF E+STAYQ WIW GNHELD+APEIGEN PFKP
Sbjct: 191 VLFVGDISYADTYPDHDNRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPFKP 250
Query: 245 YTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304
+THRY PYR+S ST P WYSIKR AYIIVL+SYSAYGKYTPQY WLE+E PKVNR ET
Sbjct: 251 FTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRTET 310
Query: 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364
PWLIVL+HSPWYNS YHYMEGE+MRV +E+WFV++KVD+V AGHVH+YER+ R SN+ Y
Sbjct: 311 PWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAY 370
Query: 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424
N+ NGI TPVKD SAPVY+TIGDGGNIEGLA + TEPQP YSA+REASFGHA+ IKNRT
Sbjct: 371 NVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGHAIFSIKNRT 430
Query: 425 HAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
HAH+ WHRNHD AV D W +NR+W+P ++
Sbjct: 431 HAHYGWHRNHDGYAVEGDRMWFYNRFWHPVDD 462
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 458 | ||||||
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.951 | 0.931 | 0.674 | 9.6e-176 | |
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.951 | 0.939 | 0.674 | 3.8e-172 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.960 | 0.944 | 0.663 | 4.9e-172 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.960 | 0.944 | 0.667 | 2.4e-170 | |
| TAIR|locus:2005533 | 469 | PAP12 "AT2G27190" [Arabidopsis | 0.958 | 0.936 | 0.613 | 9.9e-158 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.644 | 0.668 | 0.755 | 9e-156 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.930 | 0.896 | 0.562 | 1.2e-136 | |
| TAIR|locus:2075341 | 388 | PAP19 "purple acid phosphatase | 0.373 | 0.440 | 0.715 | 4.3e-94 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.799 | 0.837 | 0.430 | 7.9e-78 | |
| TAIR|locus:2011501 | 396 | PAP5 "purple acid phosphatase | 0.543 | 0.628 | 0.578 | 1.3e-77 |
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1707 (606.0 bits), Expect = 9.6e-176, P = 9.6e-176
Identities = 296/439 (67%), Positives = 350/439 (79%)
Query: 21 ICNGGVTSRYVRKAEPSVDMXXXXXXXXX--XXXXXEQVHITQGDHDGRSVIVSWVTPDE 78
+CNGG+TSRYVRK E +VDM +QVHITQGD +G++VIVSWVT +
Sbjct: 24 LCNGGITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDVEGKAVIVSWVTQEA 83
Query: 79 KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNAT 138
K N V +W+ NS +KHK H TY+++NY+SG+IHH I+ L+YDTKY+Y LG G
Sbjct: 84 KGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEYDTKYYYVLGVGQTE 143
Query: 139 RRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYADDH 197
R+F F TPP++GPDVPY FG+IGDLGQ+YDSN T HY +NP KGQAVLFVGD+SYAD +
Sbjct: 144 RKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTY 203
Query: 198 PQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQ 257
P HDNRRWDSWGRF E+STAYQ WIW GNHELD+APEIGEN PFKP+THRY PYR+S
Sbjct: 204 PDHDNRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPFKPFTHRYRTPYRSSG 263
Query: 258 STSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYN 317
ST P WYSIKR AYIIVL+SYSAYGKYTPQY WLE+E PKVNR ETPWLIVL+HSPWYN
Sbjct: 264 STEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRTETPWLIVLMHSPWYN 323
Query: 318 SNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDP 377
S YHYMEGE+MRV +E+WFV++KVD+V AGHVH+YER+ R SN+ YN+ NGI TPVKD
Sbjct: 324 SYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQ 383
Query: 378 SAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNE 437
SAPVY+TIGDGGNIEGLA + TEPQP YSA+REASFGHA+ IKNRTHAH+ WHRNHD
Sbjct: 384 SAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGHAIFSIKNRTHAHYGWHRNHDGY 443
Query: 438 AVVADSQWLFNRYWYPEEE 456
AV D W +NR+W+P ++
Sbjct: 444 AVEGDRMWFYNRFWHPVDD 462
|
|
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 1673 (594.0 bits), Expect = 3.8e-172, P = 3.8e-172
Identities = 296/439 (67%), Positives = 348/439 (79%)
Query: 21 ICNGGVTSRYVRKAEPSVDMXXXXXXXXX--XXXXXEQVHITQGDHDGRSVIVSWVTPDE 78
+CNGG +S ++RK E +VDM +QVHITQGD G++VIVSWVT DE
Sbjct: 19 MCNGGSSSPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDE 78
Query: 79 KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNAT 138
+ V +W NS +K + TYR+FNYSSG+IHH TI+ L+Y TKY+Y++G GN T
Sbjct: 79 PGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTT 138
Query: 139 RRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYADDH 197
R+F F TPP++GPDVPY FG+IGDLGQ++DSN+T HY NP KGQ VLFVGDLSYAD++
Sbjct: 139 RQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNY 198
Query: 198 PQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQ 257
P HDN RWDSWGRF E+S AYQ WIW GNHE +APEIGE VPFKPYTHRYHVPY+ASQ
Sbjct: 199 PNHDNIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYKASQ 258
Query: 258 STSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYN 317
STSP WYSIKRASA+IIVL+SYSAYGKYTPQY WLEKELPKVNR ETPWLIVL+HSPWYN
Sbjct: 259 STSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYN 318
Query: 318 SNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDP 377
S +YHYMEGE+MRV +E WFVQ+KVD+V AGHVH+YER+ R SNV YNI NG+ PV D
Sbjct: 319 SYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDK 378
Query: 378 SAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNE 437
SAPVY+TIGDGG +EGLA TEPQP YSA+REASFGHA+ +I NRTHAH++WHRN D
Sbjct: 379 SAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDGV 438
Query: 438 AVVADSQWLFNRYWYPEEE 456
AV ADS W FNRYW+P ++
Sbjct: 439 AVEADSLWSFNRYWHPVDD 457
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1672 (593.6 bits), Expect = 4.9e-172, P = 4.9e-172
Identities = 296/446 (66%), Positives = 361/446 (80%)
Query: 17 NIVGICNGGVTSRYVRKAEPSVDMXXXXXXXXXXXXXXEQVHITQGDHDGRSVIVSWVTP 76
+I + NGG+TS++VR+A PS++M EQVH+TQGDHDGR +IVSWVTP
Sbjct: 13 SITTVINGGITSKFVRQALPSIEMSLDTFPSPGGYNTPEQVHLTQGDHDGRGMIVSWVTP 72
Query: 77 -DEKYPNVVTHWEANS-----KRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130
+ NVVT+W A + K + H+ K+YR+++YSSG++HHATIK L+YDTKY Y
Sbjct: 73 LNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHATIKGLEYDTKYIY 132
Query: 131 QLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGD 190
++G+ + R+F FTTPPK+GPDVPY FGIIGDLGQTY SN+T HY+SNPKGQAVLF GD
Sbjct: 133 EVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGD 192
Query: 191 LSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYH 250
LSYADDHP HD R+WD+WGRF+E AYQ +I+ GNHE+D+ P IGE FKPYTHRY
Sbjct: 193 LSYADDHPNHDQRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYP 252
Query: 251 VPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVL 310
Y+ASQSTSPLWYS++RASA+IIVLSSYSAYGKYTPQY WLE+EL VNR ETPWLIV+
Sbjct: 253 NAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNREETPWLIVI 312
Query: 311 LHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGI 370
+HSPWYNSN+YHYMEGESMRV FESW V KVDLV++GHVH+YER+ R SN++YNITNG+
Sbjct: 313 VHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERISNIKYNITNGL 372
Query: 371 STPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTW 430
S+PVKDP+AP+Y+TIGDGGNIEG+A+ + +PQPSYSAYREASFGHA+LEI NRTHA +TW
Sbjct: 373 SSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFGHAVLEIMNRTHAQYTW 432
Query: 431 HRNHDNEAVVADSQWLFNRYWYPEEE 456
HRN DNE V ADS L NR+++P EE
Sbjct: 433 HRNQDNEPVAADSIMLHNRHFFPVEE 458
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1656 (588.0 bits), Expect = 2.4e-170, P = 2.4e-170
Identities = 297/445 (66%), Positives = 357/445 (80%)
Query: 17 NIVGICNGGVTSRYVRKAEPSVDMXXXXXXXXXXXXXXEQVHITQGDHDGRSVIVSWVTP 76
+I + N G TS +VR A+PS +M EQVHI QGD++GR +I+SWVTP
Sbjct: 14 SIATVINSGTTSNFVRTAQPSTEMSLETFPSPAGHNAPEQVHIVQGDYNGRGIIISWVTP 73
Query: 77 -DEKYPNVVTHWEA---NSKRKHKT-HSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131
+ NVVT+W+A + K K K H+ +YR+++Y+SG++HHATIK L+YDTKY Y+
Sbjct: 74 LNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFLHHATIKGLEYDTKYIYE 133
Query: 132 LGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDL 191
+G+ + R+F FT+PPKVGPDVPY FGIIGDLGQT SN+T HY+SNPKGQAVLF GDL
Sbjct: 134 VGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYMSNPKGQAVLFPGDL 193
Query: 192 SYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHV 251
SYADDHP HD R+WDSWGRFVE AYQ +I+ GNHE+D+ P IGE FKPY HRYH
Sbjct: 194 SYADDHPNHDQRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPHAFKPYIHRYHN 253
Query: 252 PYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLL 311
Y+AS+S SPLWYSI+RASA+IIVLSSYSAYGKYTPQY WLE+EL KVNR ETPWLIV++
Sbjct: 254 AYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVNREETPWLIVMV 313
Query: 312 HSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGIS 371
HSPWYNSN+YHYMEGESMR FESWFV KVDLV++GHVHSYER+ R SN++YNITNG+S
Sbjct: 314 HSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIKYNITNGLS 373
Query: 372 TPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWH 431
PVKDPSAP+Y+TIGDGGNIEG+A+ +T+PQPSYSAYREASFGHA+LEI NRTHA++TWH
Sbjct: 374 YPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAVLEIYNRTHAYYTWH 433
Query: 432 RNHDNEAVVADSQWLFNRYWYPEEE 456
RN DNE V ADS L NRY++P EE
Sbjct: 434 RNQDNEPVAADSIMLHNRYFFPVEE 458
|
|
| TAIR|locus:2005533 PAP12 "AT2G27190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1537 (546.1 bits), Expect = 9.9e-158, P = 9.9e-158
Identities = 271/442 (61%), Positives = 333/442 (75%)
Query: 18 IVGICNGGVTSRYVRKAEPSVDMXXXXXXXXX--XXXXXEQVHITQGDHDGRSVIVSWVT 75
+V C GG TS YVR ++ DM +QVH+TQG+H+G VI+SWVT
Sbjct: 22 LVEFCYGGFTSEYVRGSDLPDDMPLDSDVFEVPPGPNSPQQVHVTQGNHEGNGVIISWVT 81
Query: 76 PDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSG 135
P + V +W N K + + + + TYR+FNY+SGYIHH I L++DTKY+Y++GSG
Sbjct: 82 PVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFDTKYYYEIGSG 141
Query: 136 NATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYA 194
+RRF F PPK GPDVPY FG+IGDLGQTYDSN T HY NP KGQAVLFVGDLSYA
Sbjct: 142 KWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYA 201
Query: 195 DDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR 254
D +P HDN RWD+WGRFVE+S AYQ WIW GNHE+D+ P+IGE PFKP+ +RYH P++
Sbjct: 202 DRYPNHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHK 261
Query: 255 ASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSP 314
AS S SPLWYSIKRASAYIIV+S YS+YG YTPQY WLEKEL VNR ETPWLIVL+HSP
Sbjct: 262 ASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSP 321
Query: 315 WYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPV 374
+Y+S +HYMEGE++RV +E WFV++KVD+V AGHVH+YER+ R SN+ YNI NG+ P+
Sbjct: 322 FYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIAYNIVNGLCEPI 381
Query: 375 KDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNH 434
D SAP+Y+TIGDGGN EGL +PQP YSA+REASFGH +LEIKNRTHA+F+W+RN
Sbjct: 382 SDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQ 441
Query: 435 DNEAVVADSQWLFNRYWYPEEE 456
D AV ADS WL NR+W +++
Sbjct: 442 DGNAVAADSVWLLNRFWRAQKK 463
|
|
| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1277 (454.6 bits), Expect = 9.0e-156, Sum P(2) = 9.0e-156
Identities = 223/295 (75%), Positives = 259/295 (87%)
Query: 162 DLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAW 221
DLGQTY SNQT +Y+SNPKGQAVLFVGDLSYADDHP HD R+WDS+GRFVE S AYQ W
Sbjct: 145 DLGQTYASNQTLYNYMSNPKGQAVLFVGDLSYADDHPNHDQRKWDSYGRFVEPSAAYQPW 204
Query: 222 IWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA 281
W GN+E+DYA I E PFKPY +RYHVPY+ASQSTSPLWYSIKRAS YIIVLSSYSA
Sbjct: 205 SWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQSTSPLWYSIKRASTYIIVLSSYSA 264
Query: 282 YGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHK 341
Y KYTPQ +WL+ EL KVNR+ET WLIVL+H+PWYNSN+YHYMEGESMRV FE WFV++K
Sbjct: 265 YDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVENK 324
Query: 342 VDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEP 401
VD+V AGHVH+YER+ R SN+ YNIT+G+STPVKD +AP+Y+TIGDGGNIEG+A+ +T+P
Sbjct: 325 VDIVFAGHVHAYERSKRISNIHYNITDGMSTPVKDQNAPIYITIGDGGNIEGIANSFTDP 384
Query: 402 QPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456
QPSYSA+REASFGHA+LEIKNRTHAH+TWHRN ++EAV+ADS WL RY+ PEEE
Sbjct: 385 QPSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSIWLKKRYYLPEEE 439
|
|
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
Identities = 242/430 (56%), Positives = 312/430 (72%)
Query: 25 GVTSRYVRKAEPSVD--MXXXXXXXXXXXXXXEQVHITQGDHDGRSVIVSWVTPDEKYPN 82
G+TS ++R P+VD + +QVHITQGD+DG++VI+SWVTPDE +
Sbjct: 23 GITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVHITQGDYDGKAVIISWVTPDEPGSS 82
Query: 83 VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNATRRFH 142
V + K + Y ++ Y SG+IHH + L++DTKY+Y++ SG ++R F
Sbjct: 83 QVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCLVSDLEHDTKYYYKIESGESSREFW 142
Query: 143 FTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHD- 201
F TPP V PD Y FGIIGD+GQT++S T EHY+ + QAVLF+GDLSYAD + +D
Sbjct: 143 FVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYMESG-AQAVLFLGDLSYADRYQYNDV 201
Query: 202 NRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSP 261
RWDSWGRFVE+STAYQ W+W GNHE+DY P +GE PF+ Y RY PY AS+S+SP
Sbjct: 202 GVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSSSP 261
Query: 262 LWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSY 321
LWY+++RASA+IIVLSSYS + KYTPQ+ WL +EL +V+R +TPWLIVL+H P YNSN
Sbjct: 262 LWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVDREKTPWLIVLMHVPIYNSNEA 321
Query: 322 HYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPV 381
H+MEGESMR AFE WFVQHKVD++ AGHVH+YER+ R SNV+YN+++G PV D SAPV
Sbjct: 322 HFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRISNVRYNVSSGDRYPVPDKSAPV 381
Query: 382 YLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVA 441
Y+T+GDGGN EGLA R+TEPQP YSA+REAS+GH+ L+IKNRTHA + W+RN D + V
Sbjct: 382 YITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTLDIKNRTHAIYHWNRNDDGKKVAT 441
Query: 442 DSQWLFNRYW 451
D L N+YW
Sbjct: 442 DEFVLHNQYW 451
|
|
| TAIR|locus:2075341 PAP19 "purple acid phosphatase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 700 (251.5 bits), Expect = 4.3e-94, Sum P(2) = 4.3e-94
Identities = 126/176 (71%), Positives = 152/176 (86%)
Query: 285 YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDL 344
Y+P L EL KVNR+ETPWLIVL+H+PWYNSN+YHYMEGESMRV FE WFV++KVD+
Sbjct: 212 YSP-LTQLMDELKKVNRSETPWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVENKVDI 270
Query: 345 VVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPS 404
V AGHVH+YER+ R SN+QYNIT+G+STPVKD +APVY+TIGDGGNIEG+A+ + +PQPS
Sbjct: 271 VFAGHVHAYERSERISNIQYNITDGMSTPVKDQNAPVYITIGDGGNIEGIANNFIDPQPS 330
Query: 405 YSAYREASFGHAMLEIKNRTHAHFTWHRNHDNE----AVVADSQWLFNRYWYPEEE 456
YSA+REASFGHA+LEIKNRTHAH+TWHRN ++E AV+ADS WL NRY+ EEE
Sbjct: 331 YSAFREASFGHAILEIKNRTHAHYTWHRNKEDEFIPEAVIADSIWLKNRYYLREEE 386
|
|
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 169/393 (43%), Positives = 224/393 (56%)
Query: 55 EQVHIT-QGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGY 113
EQVHI+ GD R V+WVT D+ P+ V + + K + +Y Y Y SG
Sbjct: 48 EQVHISLAGDKHMR---VTWVTNDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGK 104
Query: 114 IHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTF 173
IHH I L+ DT Y+Y+ G G FH TPP P F + GDLGQT + T
Sbjct: 105 IHHTVIGPLEADTVYYYRCG-GEGPE-FHLKTPPA---QFPITFAVAGDLGQTGWTKSTL 159
Query: 174 EHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYA 233
+H + K L GDLSYAD + QH +WD++G V+ + + W+ GNHE +
Sbjct: 160 DH-IDQCKYAVHLLPGDLSYAD-YMQH---KWDTFGELVQPLASVRPWMVTQGNHEKESI 214
Query: 234 PEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLE 293
P I + F + R+ +PY S S S L+YS + A + I+L SY+ Y +Y+ QY+WL+
Sbjct: 215 PFIVDE--FVSFNSRWKMPYEESGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLK 272
Query: 294 KELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSY 353
+L KV+R TPWLIVL H PWYNSN+ H EG+ M E VD+V GHVH+Y
Sbjct: 273 ADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEMEPLLYASGVDIVFTGHVHAY 332
Query: 354 ERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASF 413
ERT R + NG S DP PV++TIGDGGN EGLA +Y +P P +S +REASF
Sbjct: 333 ERTKR-------VNNGKS----DPCGPVHITIGDGGNREGLARKYKDPSPEWSVFREASF 381
Query: 414 GHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWL 446
GH L++ N THA +TWHRN D+E +D WL
Sbjct: 382 GHGELQMVNSTHALWTWHRNDDDEPTRSDEVWL 414
|
|
| TAIR|locus:2011501 PAP5 "purple acid phosphatase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 154/266 (57%), Positives = 187/266 (70%)
Query: 55 EQVHITQGDHDGRSVIVSWVTP-DEKYPNVVTHWEANSKRKHKTHSIIKT--YRYFNYSS 111
EQVHITQGDH+GR +I+SWVT +E NVVT+W A+S I T YRYF+Y+S
Sbjct: 16 EQVHITQGDHNGRGMIISWVTSLNEDGSNVVTYWIASSDGSDNKSVIATTSSYRYFDYTS 75
Query: 112 GYIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQ 171
GY+HHA IK L+Y TKYFY+LG+G +TR+F+ T PPKVGPDVPY FG+IGDLGQTY SNQ
Sbjct: 76 GYLHHAIIKELEYKTKYFYELGTGRSTRQFNLT-PPKVGPDVPYTFGVIGDLGQTYASNQ 134
Query: 172 TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELD 231
T +Y+SNPKGQAVLF GDLSYADDHP HD +WDS+GRFVE S AYQ WIW GNHE+D
Sbjct: 135 TLYNYMSNPKGQAVLFAGDLSYADDHPNHDQSKWDSYGRFVEPSAAYQPWIWAAGNHEID 194
Query: 232 YAPEIGENVPFKPYTHRYHVPYRASQST-SPL--WYS-----IKRASA-YIIVLSSYSAY 282
YA IGE PFKPY +RYHVPYRASQ+ +P W + R+ ++IVL Y
Sbjct: 195 YAQSIGETQPFKPYKNRYHVPYRASQNKYTPQNSWLQDEFKKVNRSETPWLIVLVHAPWY 254
Query: 283 GKYTPQYAWLEKELPKVNRAETPWLI 308
+ Y ++E E +V PW +
Sbjct: 255 N--SNNYHYMEGESMRVTFE--PWFV 276
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q93WP4 | PEPP_ALLCE | 3, ., 1, ., 3, ., 6, 0 | 0.5622 | 0.9650 | 0.9189 | N/A | no |
| Q09131 | PPAF_SOYBN | 3, ., 1, ., 3, ., 2 | 0.6947 | 0.9519 | 0.9396 | yes | no |
| Q9SDZ9 | PPAF2_IPOBA | 3, ., 1, ., 3, ., 2 | 0.6822 | 0.9759 | 0.9612 | N/A | no |
| Q9SIV9 | PPA10_ARATH | 3, ., 1, ., 3, ., 2 | 0.6814 | 0.9781 | 0.9572 | yes | no |
| Q9SE00 | PPAF1_IPOBA | 3, ., 1, ., 3, ., 2 | 0.6190 | 0.9868 | 0.9556 | N/A | no |
| P80366 | PPAF_PHAVU | 3, ., 1, ., 3, ., 2 | 0.6395 | 0.9323 | 0.9884 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 458 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-105 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 9e-92 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 3e-26 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 6e-20 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 9e-09 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 8e-05 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 1e-04 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 2e-04 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 314 bits (807), Expect = e-105
Identities = 123/305 (40%), Positives = 167/305 (54%), Gaps = 18/305 (5%)
Query: 151 PDVPYIFGIIGDLGQ-TYDSNQTFEHYV-SNPKGQAVLFVGDLSYADDHPQHDNRRWDSW 208
D P+ F + GD+GQ T +S T +H A+L VGDL+YAD ++ RWD++
Sbjct: 1 DDTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADG--YNNGSRWDTF 58
Query: 209 GRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKR 268
R +E +Y ++ PGNHE DY + F P H P S STS LWYS
Sbjct: 59 MRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSP---SGSTSNLWYSFDV 115
Query: 269 ASAYIIVLSSYSAY---GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYM- 324
+ + LS+ + G +PQY WLE +L KV+R++TPW+IV+ H P Y SN+ H
Sbjct: 116 GPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDC 175
Query: 325 -EGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYL 383
EGE MR A E F ++ VDLV++GHVH+YERT N + +P PV++
Sbjct: 176 IEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYS---NPKGPVHI 232
Query: 384 TIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADS 443
IG GGN EGL P P++SA+RE+ +G L + N TH HF W RN D VV DS
Sbjct: 233 VIGAGGNDEGLDPFSAPP-PAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDG--VVIDS 289
Query: 444 QWLFN 448
W+
Sbjct: 290 FWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 9e-92
Identities = 153/396 (38%), Positives = 221/396 (55%), Gaps = 26/396 (6%)
Query: 54 PEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYF-NYSSG 112
P+QVHI+ D + +SW+T D P+VV + + K + + +Y Y Y SG
Sbjct: 44 PDQVHISLVGPD--KMRISWITQDSIPPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSG 100
Query: 113 YIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQT 172
I+ I LK +T Y+Y+ G ++T+ F F TPP P F + GDLG + + T
Sbjct: 101 QINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKST 157
Query: 173 FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232
EH VS + GDLSYA+ + WD++GR V+ + + W+ GNHEL+
Sbjct: 158 LEH-VSKWDYDVFILPGDLSYANFY----QPLWDTFGRLVQPLASQRPWMVTHGNHELEK 212
Query: 233 APEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWL 292
P + F Y R+ +P+ S STS L+YS +II+L SY+ + + QY WL
Sbjct: 213 IPILHPE-KFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWL 271
Query: 293 EKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGES--MRVAFESWFVQHKVDLVVAGHV 350
E L K++R TPW++ ++H+PWYNSN H E ES M+ + E+ + +VDLV AGHV
Sbjct: 272 ENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHV 331
Query: 351 HSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYRE 410
H+YER +R + D PVY+TIGDGGN EGLA +Y +P+P S +RE
Sbjct: 332 HAYERFDRVYQGKT-----------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380
Query: 411 ASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWL 446
ASFGH L + + +TWHRN D+++V +DS WL
Sbjct: 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWL 416
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 3e-26
Identities = 46/200 (23%), Positives = 56/200 (28%), Gaps = 19/200 (9%)
Query: 157 FGIIGDLGQTYDSNQTFE---HYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVE 213
+IGDL D + PK VLF+GDL F
Sbjct: 2 ILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPPSLEVLALL-----FAL 56
Query: 214 KSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYI 273
K A V GNH+ D S T I
Sbjct: 57 KLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGT-----------VEI 105
Query: 274 IVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAF 333
I LSS G +LE + A I+L+H P S A
Sbjct: 106 IGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEAL 165
Query: 334 ESWFVQHKVDLVVAGHVHSY 353
E + VDLV+ GH H
Sbjct: 166 EDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 82.9 bits (206), Expect = 6e-20
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 378 SAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNE 437
APV++ +G GN D + +PQP +SA+R++ +G+ L + NRTH ++ + R+ D
Sbjct: 1 KAPVHIVVGAAGNGL---DPFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGT 57
Query: 438 AVVADS 443
V DS
Sbjct: 58 --VLDS 61
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 9e-09
Identities = 22/94 (23%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 283 GKYTPQYAWLEKELPKVNRAETPWL-------IVLLHSPWYNSNSYHYMEGESMRVAFES 335
G L L + P I+L H P Y+ + + A
Sbjct: 38 GDGPDPEEVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLE 97
Query: 336 WFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNG 369
++ VDLV++GH H YER I G
Sbjct: 98 LLEKYGVDLVLSGHTHVYERREPDGGGTLYINPG 131
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 8e-05
Identities = 33/181 (18%), Positives = 56/181 (30%), Gaps = 24/181 (13%)
Query: 184 AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFK 243
++ GDL+ + ++ + + + I VPGNH+ N
Sbjct: 36 LLVVTGDLTNDGEPEEYRRLKE-----LLARLELPAPVIVVPGNHDA-----RVVNGEAF 85
Query: 244 PYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSY---SAYGKYTP-QYAWLEKELPKV 299
+S W +I L S G+ Q WLE+ L
Sbjct: 86 SDQFFNRYAVLVGACSSGGW--------RVIGLDSSVPGVPLGRLGAEQLDWLEEALAAA 137
Query: 300 NRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH--KVDLVVAGHVHSYERTN 357
++VL H P + + + H V LV++GH+H +T
Sbjct: 138 PERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTV 197
Query: 358 R 358
Sbjct: 198 Y 198
|
Length = 301 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 59/305 (19%), Positives = 100/305 (32%), Gaps = 81/305 (26%)
Query: 157 FGIIGDLGQTYDSNQ-----TFEHYVSNPKGQAVLFVGDLSYADDHPQ--HDNRRWDSWG 209
F +GD G + Q + +L +GD Y DD D R ++
Sbjct: 3 FLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFY-DDGVGSVDDPRFETTFE 61
Query: 210 RFVEKSTAYQAWIWVPGNH--------ELDYAPEIGENVPFKPYTHRYHVPYRASQSTSP 261
+ W V GNH ++DY +P + R+ +P
Sbjct: 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYT--------KRPNSPRWTMPAY------- 106
Query: 262 LWYSI------KRASAYIIVLSS----------YSAYGKYTPQY-----AWLEKELPKVN 300
+Y + + I++ + S YG + AWLEK L
Sbjct: 107 -YYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTL---A 162
Query: 301 RAETPWLIVLLHSPWYNSNSYHY---MEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357
+ W IV+ H P Y S+ H + + + ++KVD ++GH H
Sbjct: 163 ASTADWKIVVGHHPIY-SSGEHGPTSCLVDRLLPLLK----KYKVDAYLSGHDH------ 211
Query: 358 RFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAM 417
N+Q+ +G T ++ G G + +S + + G A
Sbjct: 212 ---NLQHIKDDGSGTS--------FVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAY 260
Query: 418 LEIKN 422
LE+
Sbjct: 261 LELTK 265
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 49/224 (21%), Positives = 69/224 (30%), Gaps = 52/224 (23%)
Query: 184 AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA-WIWVPGNHE-----LDYAPEIG 237
VL GDL DD +S+ R E A +PGNH+ PE+
Sbjct: 43 LVLVTGDL--TDDG------SPESYERLRELLAALPIPVYLLPGNHDDRAAMRAVFPELP 94
Query: 238 ENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSY---SAYGKYTP-QYAWLE 293
F Y +R +I+L S G+ Q WLE
Sbjct: 95 PAPGFVQYVVD-LGGWR------------------LILLDSSVPGQHGGELCAAQLDWLE 135
Query: 294 KELPKVNRAETPWL--IVLLHSPWYNSNSYHYMEGESMR--VAFESWFVQH-KVDLVVAG 348
L AE P +V LH P + +M+ +R A + +H V ++ G
Sbjct: 136 AAL-----AEAPDKPTLVFLHHPPFPVGI-AWMDAIGLRNAEALAAVLARHPNVRAILCG 189
Query: 349 HVHSYERTNRFSNVQYNITNGISTPVK---DPSAPVYLTIGDGG 389
HVH + + D A L G
Sbjct: 190 HVHR-PIDGSWGGIPLLTAPSTCHQFAPDLDDFALDALAPGYRA 232
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 458 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.97 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.96 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.96 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.94 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.93 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.91 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.91 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.89 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.86 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.79 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.78 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.77 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.74 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.71 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.69 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.69 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.67 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.63 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.61 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.61 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.59 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.56 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.53 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.52 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.52 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.51 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.5 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.43 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.34 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.32 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.25 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.22 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.2 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.18 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.17 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.17 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.16 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.16 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.14 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.12 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.09 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.07 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.02 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.97 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.93 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.93 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.92 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.91 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.87 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.86 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.8 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.78 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.74 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.62 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.62 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.61 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.55 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.54 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.54 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.53 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.42 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.41 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.4 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.4 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.33 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.32 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.31 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.31 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.29 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.28 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.26 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.25 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.18 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.1 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.09 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.95 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.93 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.89 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.84 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.84 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.73 | |
| PHA02239 | 235 | putative protein phosphatase | 97.7 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.68 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.6 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.54 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.51 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.5 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.48 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.48 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 97.46 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.43 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.4 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.34 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.3 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.3 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.28 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.22 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.15 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.11 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.03 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 97.01 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.96 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.59 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.54 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.48 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 96.48 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 96.43 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.28 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.26 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 96.11 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.01 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 95.82 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 95.72 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 95.55 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 95.34 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 95.3 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 95.1 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 95.06 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 95.02 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 95.0 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 94.68 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 94.65 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 94.63 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 94.52 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 93.4 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 92.96 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 91.5 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 91.39 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 90.73 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 89.96 | |
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 83.71 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 82.81 | |
| PRK10301 | 124 | hypothetical protein; Provisional | 81.71 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-82 Score=615.72 Aligned_cols=421 Identities=41% Similarity=0.633 Sum_probs=368.8
Q ss_pred eeccCCcccccccCCCCCCCCCCcC--CCCCCCCCCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCc---
Q 046207 20 GICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRK--- 94 (458)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~--- 94 (458)
..|.++.++++.|...|+..++++. +..|...++|+||||+++++.. +|+|+|.|.+. ....|+|+...++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~~-~m~VswvT~~~-~~~~V~Yg~~~~~~~~~~ 86 (452)
T KOG1378|consen 9 SEINPKHTLHDINPLPGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNLN-EMRVSWVTGDG-EENVVRYGEVKDKLDNSA 86 (452)
T ss_pred eeccCCCccccccccCcccccccccccccCcccCCCCCeEEEeccCCCC-cEEEEEeCCCC-CCceEEEeecCCCccccc
Confidence 4678999999999998888888776 6778888999999999999985 99999999974 348999998766522
Q ss_pred --eEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCCC-CccceEEEECCCCCCCCCCeEEEEEecCCCCCCcHH
Q 046207 95 --HKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSG-NATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQ 171 (458)
Q Consensus 95 --~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~g-~~~~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~ 171 (458)
..+++.+..|...+++++++|+|++++|+|+|+||||||++ .+|++++|+|+| ++..+.+|+++||++.......
T Consensus 87 ~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~s 164 (452)
T KOG1378|consen 87 ARGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYTS 164 (452)
T ss_pred cccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEccccccccccc
Confidence 22333333343345789999999999999999999999984 347799999999 3668999999999999988778
Q ss_pred HHHHHHhCCCCcEEEEcCccccCCCCCCCch-hHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeec
Q 046207 172 TFEHYVSNPKGQAVLFVGDLSYADDHPQHDN-RRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYH 250 (458)
Q Consensus 172 ~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~-~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~ 250 (458)
++..+.+..++|+|||.|||+|++. +. .+||.|.++++++++.+|+|++.||||+++.+.. .|..|.+||.
T Consensus 165 ~~~~~~~~~k~d~vlhiGDlsYa~~----~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~Rf~ 236 (452)
T KOG1378|consen 165 TLRNQEENLKPDAVLHIGDLSYAMG----YSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSARFN 236 (452)
T ss_pred hHhHHhcccCCcEEEEecchhhcCC----CCccchHHHHhhhhhhhccCceEEecccccccCCCcc----cccccceeec
Confidence 8888887767999999999999998 45 6999999999999999999999999999765532 6899999999
Q ss_pred cccCCCCCCCCceEEEEcCeEEEEEecCCCcC--CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCC-CCccch
Q 046207 251 VPYRASQSTSPLWYSIKRASAYIIVLSSYSAY--GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSY-HYMEGE 327 (458)
Q Consensus 251 ~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~--~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~-~~~~~~ 327 (458)
||.++..+..++||||++|++|||+|+|+.++ .+..+|.+||+++|++++|++++|+||+.|.|+|+++.. +..+++
T Consensus 237 mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~ 316 (452)
T KOG1378|consen 237 MPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGE 316 (452)
T ss_pred cCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCc
Confidence 99988887788999999999999999999885 346899999999999998877999999999999998775 666665
Q ss_pred --HHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 046207 328 --SMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSY 405 (458)
Q Consensus 328 --~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~ 405 (458)
.+++.|++||.+++||++|.||.|+|||++|+++.++...+| +.|+.++++|+||++|+||+.++.+.. ..++|+|
T Consensus 317 ~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~-~~~~~d~~aPvyI~~G~~G~~e~~~~~-~~~~p~~ 394 (452)
T KOG1378|consen 317 FESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWG-PVHLVDGMAPIYITVGDGGNHEHLDPF-SSPQPEW 394 (452)
T ss_pred chhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCC-cccccCCCCCEEEEEccCCcccccCcc-cCCCCcc
Confidence 889999999999999999999999999999999999877667 788899999999999999999986544 4489999
Q ss_pred cceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEeeecCCC
Q 046207 406 SAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPE 454 (458)
Q Consensus 406 s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~~~~ 454 (458)
|+||+.+|||++|++.|+||+.|+|+++.|++.++.|+|||.|+++.+.
T Consensus 395 Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~ 443 (452)
T KOG1378|consen 395 SAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMV 443 (452)
T ss_pred cccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccc
Confidence 9999999999999999999999999999888888999999999987764
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=623.57 Aligned_cols=411 Identities=37% Similarity=0.661 Sum_probs=350.5
Q ss_pred eeccCCcccccccCCCCCCCCCCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEE
Q 046207 20 GICNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHS 99 (458)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~ 99 (458)
..|.++.+.+|+|++.....+++. ..+.+...|+||||++++ + ++|+|+|.|.++ ..+.|+||++++.+..++.|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~P~qvhls~~~-~-~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~g 86 (427)
T PLN02533 12 LIVLAGNVLSYDRPGTRKNLVIHP--DNEDDPTHPDQVHISLVG-P-DKMRISWITQDS-IPPSVVYGTVSGKYEGSANG 86 (427)
T ss_pred HhhhccCcccccCCCccccccccc--cCCCCCCCCceEEEEEcC-C-CeEEEEEECCCC-CCCEEEEecCCCCCcceEEE
Confidence 345566889999976544433332 224566789999999998 3 699999999974 56899999999888999999
Q ss_pred EEEEEEe-cccccceEEEEEecCCCCCCEEEEEeCCCCccceEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHh
Q 046207 100 IIKTYRY-FNYSSGYIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVS 178 (458)
Q Consensus 100 ~~~~~~~-~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~g~~~~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~ 178 (458)
++++|++ ..+.++++|+|+|+||+|+|+|+|||+.+..+++++|+|+|. ..++||+++||+|.......+++++.+
T Consensus 87 ~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~---~~~~~f~v~GDlG~~~~~~~tl~~i~~ 163 (427)
T PLN02533 87 TSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKSTLEHVSK 163 (427)
T ss_pred EEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCC---CCCeEEEEEEeCCCCcccHHHHHHHHh
Confidence 9888875 346789999999999999999999999755567999999985 368999999999877666778888877
Q ss_pred CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCC
Q 046207 179 NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQS 258 (458)
Q Consensus 179 ~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~ 258 (458)
. +|||||++||++|++. ++..|+.|.+.++++.+.+|+|+++||||+...+.. ....+..|..+|.||..+.+.
T Consensus 164 ~-~pD~vl~~GDl~y~~~----~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g~ 237 (427)
T PLN02533 164 W-DYDVFILPGDLSYANF----YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESGS 237 (427)
T ss_pred c-CCCEEEEcCccccccc----hHHHHHHHHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccCC
Confidence 6 9999999999999876 678999999999999889999999999998643321 134577889999999866555
Q ss_pred CCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCcc--chHHHHHHHHH
Q 046207 259 TSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYME--GESMRVAFESW 336 (458)
Q Consensus 259 ~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l 336 (458)
..+.||+|++|++|||+||++.++....+|++||+++|+++++++.+|+||++|+|+|++...+.++ ...+++.|+++
T Consensus 238 ~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~L 317 (427)
T PLN02533 238 TSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETL 317 (427)
T ss_pred CCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHH
Confidence 6789999999999999999998887789999999999999887788999999999999876554332 34578899999
Q ss_pred HHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEE
Q 046207 337 FVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHA 416 (458)
Q Consensus 337 l~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~ 416 (458)
|.+++||++|+||+|.|||+.|+++++ .+++|++||++|+||+.++....+.+++|+||+||+.+|||+
T Consensus 318 l~~~~VdlvlsGH~H~YeR~~p~~~~~-----------~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~ 386 (427)
T PLN02533 318 LYKARVDLVFAGHVHAYERFDRVYQGK-----------TDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHG 386 (427)
T ss_pred HHHhCCcEEEecceecccccccccCCc-----------cCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEE
Confidence 999999999999999999999999876 457899999999999999876677788999999999999999
Q ss_pred EEEEecCceEEEEEEEcCCCceeeeeEEEEEeeecCCCCCC
Q 046207 417 MLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPEEEH 457 (458)
Q Consensus 417 ~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~~~~~~~ 457 (458)
+|+|.|.||++|+|++|+|++.++.|+|||.|.- .+..|
T Consensus 387 ~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~--~~~~~ 425 (427)
T PLN02533 387 QLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLL--TEPGC 425 (427)
T ss_pred EEEEEcCCeEEEEEEecCCCCceeeeEEEEEecc--CCCcc
Confidence 9999999999999999999988899999999972 23455
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-48 Score=374.02 Aligned_cols=286 Identities=43% Similarity=0.762 Sum_probs=225.8
Q ss_pred CCCeEEEEEecCCCC-CCcHHHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcc
Q 046207 152 DVPYIFGIIGDLGQT-YDSNQTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~-~~~~~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
..++||+++||+|.. ..+..+++++.+. .+|||||++||++|+++.. ...+|+.|.+.++++...+|+++++||||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~--~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 79 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN--NGSRWDTFMRQIEPLASYVPYMVTPGNHE 79 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc--cchhHHHHHHHHHHHHhcCCcEEcCcccc
Confidence 357999999999973 4567888888873 4999999999999987621 12689999999999988999999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC---CCChHHHHHHHHHhccccCCCCCe
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY---GKYTPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~---~~~~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
+....... ....+..++.++........+.||+|++|+++||+|||.... ....+|++||+++|+++++.+.+|
T Consensus 80 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~ 156 (294)
T cd00839 80 ADYNFSFY---KIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPW 156 (294)
T ss_pred cccCCCCc---ccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCe
Confidence 85432211 111111123334333334467899999999999999998764 457999999999999976656789
Q ss_pred EEEEeccccccCCCCCCc--cchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEE
Q 046207 307 LIVLLHSPWYNSNSYHYM--EGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLT 384 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv 384 (458)
+||++|+|+++....... .....++.|.++|++++|+++|+||+|.|+|+.|+++++.. +.+..+.+++|++||+
T Consensus 157 ~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~---~~~~~~~~~~g~~yiv 233 (294)
T cd00839 157 IIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV---GDCNPYSNPKGPVHIV 233 (294)
T ss_pred EEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec---cccccccCCCccEEEE
Confidence 999999999987654322 24677899999999999999999999999999999987642 3333346789999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEe
Q 046207 385 IGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFN 448 (458)
Q Consensus 385 ~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 448 (458)
+|+||+.++..... .+.++|++++...+||++|++.++++|+++|+++.+|+ +.|+|+|.|
T Consensus 234 ~G~~G~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~--v~D~f~i~k 294 (294)
T cd00839 234 IGAGGNDEGLDPFS-APPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGV--VIDSFWIIK 294 (294)
T ss_pred ECCCccccCcCccc-CCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCe--EEEEEEEeC
Confidence 99999987642222 12357999999999999999998889999999988998 999999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=294.25 Aligned_cols=260 Identities=16% Similarity=0.230 Sum_probs=193.4
Q ss_pred CCCeEEEEEecCCCCCCcHHHHH----HHHhCCCCcEEEEcCccccCCCCCCCchhHHHH-HHHHHHHHh--hccceEEc
Q 046207 152 DVPYIFGIIGDLGQTYDSNQTFE----HYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDS-WGRFVEKST--AYQAWIWV 224 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~~~~l~----~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~-~~~~~~~l~--~~~P~~~v 224 (458)
+..++|+++||+|.+...+..++ ++.++.++||||.+||++ .++..+.++++|+. |.+.+.... ..+||++|
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~v 102 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTV 102 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhhCCCeEEe
Confidence 46799999999997655554443 444556999999999999 56666667888876 666665544 47899999
Q ss_pred cCCcccCCCCCCCCcc--------------cC---cccceeeccccCCCCCCCCceEEE----Ec-------------Ce
Q 046207 225 PGNHELDYAPEIGENV--------------PF---KPYTHRYHVPYRASQSTSPLWYSI----KR-------------AS 270 (458)
Q Consensus 225 ~GNHD~~~~~~~~~~~--------------~~---~~~~~~f~~P~~~~~~~~~~~ys~----~~-------------g~ 270 (458)
+||||+..+....-.+ .+ .....||.||. .||.+ .. ..
T Consensus 103 LGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~~~ 174 (394)
T PTZ00422 103 LGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKDMS 174 (394)
T ss_pred CCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCCCE
Confidence 9999985443211000 00 01235788884 47754 21 23
Q ss_pred EEEEEecCCCc-----CCC-ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccE
Q 046207 271 AYIIVLSSYSA-----YGK-YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDL 344 (458)
Q Consensus 271 ~~fi~Lds~~~-----~~~-~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdl 344 (458)
+.||+|||... +.. ...|++||+++|+.+ ++.++|+||++|||+|+++..+ ....+++.|+|||++|+||+
T Consensus 175 v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~Vdl 251 (394)
T PTZ00422 175 VAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQVDL 251 (394)
T ss_pred EEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcCcCE
Confidence 89999999642 222 478999999999754 3567899999999999987532 35678999999999999999
Q ss_pred EEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCc
Q 046207 345 VVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424 (458)
Q Consensus 345 vl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~ 424 (458)
+|+||+|++||.. .+++.||++|+||+..+.. . ..++++.|....+||+.+++ +++
T Consensus 252 YisGHDH~lq~i~-------------------~~gt~yIvSGaGs~~~~~~-~---~~~~~s~F~~~~~GF~~~~l-~~~ 307 (394)
T PTZ00422 252 YISGYDRNMEVLT-------------------DEGTAHINCGSGGNSGRKS-I---MKNSKSLFYSEDIGFCIHEL-NAE 307 (394)
T ss_pred EEEccccceEEec-------------------CCCceEEEeCccccccCCC-C---CCCCCcceecCCCCEEEEEE-ecC
Confidence 9999999999964 3578899999999875421 1 22347889888999999998 556
Q ss_pred eEEEEEEEcCCCceeeeeEEEEEee
Q 046207 425 HAHFTWHRNHDNEAVVADSQWLFNR 449 (458)
Q Consensus 425 ~~~~~~~~~~dg~~~~~D~~~i~~~ 449 (458)
.++++|+++.+|+ +++++++.++
T Consensus 308 ~l~~~fid~~~Gk--vL~~~~~~~~ 330 (394)
T PTZ00422 308 GMVTKFVSGNTGE--VLYTHKQPLK 330 (394)
T ss_pred EEEEEEEeCCCCc--EEEEeeeccc
Confidence 7999999767899 8999988553
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=277.60 Aligned_cols=248 Identities=20% Similarity=0.354 Sum_probs=178.0
Q ss_pred eEEEEEecCCCC-CCcH----HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHH-HHHHHHHHHhhccceEEccCCc
Q 046207 155 YIFGIIGDLGQT-YDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWD-SWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 155 ~~f~~~gD~~~~-~~~~----~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~-~~~~~~~~l~~~~P~~~v~GNH 228 (458)
++|+++||++.. .... ..+.++++..+|||||++||++|.++....+..+|. .|.+.+..+..++|+++++|||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 489999999875 2222 233445554599999999999998875443344553 4555555554579999999999
Q ss_pred ccCCCCCCCCcccCcc--cceeeccccCCCCCCCCceEEEEcC------eEEEEEecCCCcC---------------CCC
Q 046207 229 ELDYAPEIGENVPFKP--YTHRYHVPYRASQSTSPLWYSIKRA------SAYIIVLSSYSAY---------------GKY 285 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~--~~~~f~~P~~~~~~~~~~~ys~~~g------~~~fi~Lds~~~~---------------~~~ 285 (458)
|+..... ....+.. +..+|.+| ..||+|+++ +++||+|||.... ...
T Consensus 81 D~~~~~~--~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~ 150 (277)
T cd07378 81 DYSGNVS--AQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLA 150 (277)
T ss_pred ccCCCch--heeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhH
Confidence 9853211 0111111 12333333 468999987 7999999997542 124
Q ss_pred hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceee
Q 046207 286 TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYN 365 (458)
Q Consensus 286 ~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~ 365 (458)
.+|++||+++|+++ +.+|+||++|||+++..... .....++.|.+++++++|+++|+||+|.+++..
T Consensus 151 ~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~-------- 217 (277)
T cd07378 151 EEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIK-------- 217 (277)
T ss_pred HHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeee--------
Confidence 89999999999985 34899999999998765422 135678899999999999999999999999875
Q ss_pred ecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCC
Q 046207 366 ITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDN 436 (458)
Q Consensus 366 ~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg 436 (458)
....++.||++|+||...+.........|.|..++...+||++|+|.+ ..++++|+. .||
T Consensus 218 ---------~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~-~~l~~~~~~-~~g 277 (277)
T cd07378 218 ---------DDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTK-EELTVRFYD-ADG 277 (277)
T ss_pred ---------cCCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEec-CEEEEEEEC-CCC
Confidence 223588999999999876543322222345788888999999999965 469999884 555
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=230.82 Aligned_cols=272 Identities=19% Similarity=0.272 Sum_probs=181.9
Q ss_pred EEEECCCCCCCCCCeEEEEEecCCCCCCcHH-----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHH-HHHHHHH
Q 046207 141 FHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQ-----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDS-WGRFVEK 214 (458)
Q Consensus 141 ~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~-----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~-~~~~~~~ 214 (458)
-++.-++. ++..++|+++||+|......+ ....+.+..++||||.+||++|.++..+.++.+++. |.+.+..
T Consensus 32 p~l~~p~~--~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~ 109 (336)
T KOG2679|consen 32 PRLYDPAK--SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTA 109 (336)
T ss_pred hhhcCCCC--CCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccC
Confidence 34554444 568899999999986543222 233455556999999999999999987777777754 4444433
Q ss_pred HhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEE----EE--cCeEEEEEecCCCc-----CC
Q 046207 215 STAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYS----IK--RASAYIIVLSSYSA-----YG 283 (458)
Q Consensus 215 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys----~~--~g~~~fi~Lds~~~-----~~ 283 (458)
-.-..|||.+.||||+..+-...-..-+.....||..|. .||. .+ .-++.++++|+... +.
T Consensus 110 pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~yd 181 (336)
T KOG2679|consen 110 PSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYD 181 (336)
T ss_pred cccccchhhhccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheecccccccc
Confidence 223569999999999865432111111344555665552 1221 11 11234444444321 11
Q ss_pred ---------CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 284 ---------KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 284 ---------~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
....++.||+..|++ +.++|+||++|||+.+.+.. +...+++++|.|||++++||++++||+|+.|
T Consensus 182 w~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~H--G~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQ 256 (336)
T KOG2679|consen 182 WRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHH--GPTKELEKQLLPILEANGVDLYINGHDHCLQ 256 (336)
T ss_pred cccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhcc--CChHHHHHHHHHHHHhcCCcEEEecchhhhh
Confidence 026788999999999 78899999999999876543 4467899999999999999999999999999
Q ss_pred cccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCC-CCCCCCcceeeCceeEEEEEEecCceEEEEEEEc
Q 046207 355 RTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYT-EPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRN 433 (458)
Q Consensus 355 r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~-~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 433 (458)
+.. ...+++-|+++|+|...-.. .... .-.|+.-.|.-..-||+.+++. ...+++.|++
T Consensus 257 his-----------------~~e~~iqf~tSGagSkaw~g-~~~~~~~~p~~lkF~YdgqGfmsv~is-~~e~~vvfyD- 316 (336)
T KOG2679|consen 257 HIS-----------------SPESGIQFVTSGAGSKAWRG-TDHNPEVNPKELKFYYDGQGFMSVEIS-HSEARVVFYD- 316 (336)
T ss_pred hcc-----------------CCCCCeeEEeeCCcccccCC-CccCCccChhheEEeeCCCceEEEEEe-cceeEEEEEe-
Confidence 964 11445567888877665332 1111 2234455666666799999994 5568899986
Q ss_pred CCCceeeeeEEEEEee
Q 046207 434 HDNEAVVADSQWLFNR 449 (458)
Q Consensus 434 ~dg~~~~~D~~~i~~~ 449 (458)
..|+ +..+....|+
T Consensus 317 ~~G~--~Lhk~~t~kr 330 (336)
T KOG2679|consen 317 VSGK--VLHKWSTSKR 330 (336)
T ss_pred ccCc--eEEEeecccc
Confidence 5688 6777665555
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=233.11 Aligned_cols=230 Identities=20% Similarity=0.260 Sum_probs=160.0
Q ss_pred CCeEEEEEecCCCCCC--c---------------HHHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHH
Q 046207 153 VPYIFGIIGDLGQTYD--S---------------NQTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK 214 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~--~---------------~~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 214 (458)
.+++|+++||+|.+.. . ...++.+.+. .+||+||++||+++.+........+|+.+.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 5799999999998731 1 1223333332 28999999999999876221122456666677776
Q ss_pred HhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC------CCChHH
Q 046207 215 STAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY------GKYTPQ 288 (458)
Q Consensus 215 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~------~~~~~Q 288 (458)
+...+|+++++||||+...+. ...+..|...| +..+|++++++++||+|||.... ....+|
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~---~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~q 149 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPT---EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQ 149 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCC---hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHHH
Confidence 655789999999999743211 11112232222 23589999999999999996532 124789
Q ss_pred HHHHHHHhccccCCCCCeEEEEeccccccCCCCCC----ccchHHHHHHHHHHHHcCccEEEecccccccccccccccee
Q 046207 289 YAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHY----MEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364 (458)
Q Consensus 289 ~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~----~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~ 364 (458)
++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||+|.+.+..
T Consensus 150 l~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~------- 222 (262)
T cd07395 150 DVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR------- 222 (262)
T ss_pred HHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE-------
Confidence 99999999997544567899999999985432211 1134678899999999999999999999987632
Q ss_pred eecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEE
Q 046207 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWH 431 (458)
Q Consensus 365 ~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~ 431 (458)
..|+.|+++++.|...+ . ...||..++|+++. ++++|+
T Consensus 223 ------------~~g~~~~~~~~~~~~~~-------~---------~~~g~~~~~v~~~~-~~~~~~ 260 (262)
T cd07395 223 ------------YGGLEMVVTSAIGAQLG-------N---------DKSGLRIVKVTEDK-IVHEYY 260 (262)
T ss_pred ------------ECCEEEEEcCceecccC-------C---------CCCCcEEEEECCCc-eeeeee
Confidence 23566888887775321 1 13699999996544 788876
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-28 Score=246.87 Aligned_cols=289 Identities=16% Similarity=0.256 Sum_probs=153.2
Q ss_pred ecCCCCCceEEEEEcCCC--------CCCCeEEEEecCCCC--ceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 61 QGDHDGRSVIVSWVTPDE--------KYPNVVTHWEANSKR--KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 61 ~~~~~~~~~~i~W~t~~~--------~~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
..|||..+.+|.|++..+ ..+..|+|..+.+.. .....++..+ ....++++++.|+||+|+|.|+|
T Consensus 4 asGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y~Y 79 (453)
T PF09423_consen 4 ASGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRYYY 79 (453)
T ss_dssp EEE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EEEE
T ss_pred cccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceEEE
Confidence 346677899999998764 124466666554432 2333333322 34688999999999999999999
Q ss_pred EeCC---CCccceEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCC---C------
Q 046207 131 QLGS---GNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDH---P------ 198 (458)
Q Consensus 131 ~v~~---g~~~~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~---~------ 198 (458)
|+.. +..++.++|||+|.. ....+||+++||.+.......+++++++..+|||+||+||.+|++.. .
T Consensus 80 ~~~~~~~~~~s~~g~~rT~p~~-~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~ 158 (453)
T PF09423_consen 80 RFVVDGGGQTSPVGRFRTAPDG-DPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRP 158 (453)
T ss_dssp EEEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---
T ss_pred EEEEecCCCCCCceEEEcCCCC-CCCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccc
Confidence 9987 345679999999753 33569999999998766668889999984499999999999999852 0
Q ss_pred ----------C----CchhHHHHH--HHHHHHHhhccceEEccCCcccCCCCCCCCc-------ccC-----cccceeec
Q 046207 199 ----------Q----HDNRRWDSW--GRFVEKSTAYQAWIWVPGNHELDYAPEIGEN-------VPF-----KPYTHRYH 250 (458)
Q Consensus 199 ----------~----~~~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~-------~~~-----~~~~~~f~ 250 (458)
. .+..+|..+ ...++.+.+.+|++.++.+||+..+...... ..+ .+++..+.
T Consensus 159 ~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e 238 (453)
T PF09423_consen 159 IGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFE 238 (453)
T ss_dssp S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHh
Confidence 0 112233332 2456677788999999999999543221100 000 11111221
Q ss_pred -cccCCC---CCCCCceEEEEcCe-EEEEEecCCCcCC---------------------CChHHHHHHHHHhccccCCCC
Q 046207 251 -VPYRAS---QSTSPLWYSIKRAS-AYIIVLSSYSAYG---------------------KYTPQYAWLEKELPKVNRAET 304 (458)
Q Consensus 251 -~P~~~~---~~~~~~~ys~~~g~-~~fi~Lds~~~~~---------------------~~~~Q~~WL~~~L~~~~~~~~ 304 (458)
+|.... ......|++|++|+ +.|++||+..... .+.+|++||++.|++ +.+
T Consensus 239 ~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a 315 (453)
T PF09423_consen 239 YQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQA 315 (453)
T ss_dssp HS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----S
T ss_pred hcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc---CCC
Confidence 343211 12345789999999 9999999975311 158999999999998 568
Q ss_pred CeEEEEeccccccCCCC-----------CCccchHHHHHHHHHHHHcCcc--EEEecccccccccc
Q 046207 305 PWLIVLLHSPWYNSNSY-----------HYMEGESMRVAFESWFVQHKVD--LVVAGHVHSYERTN 357 (458)
Q Consensus 305 ~~~Iv~~H~P~~~~~~~-----------~~~~~~~~~~~l~~ll~~~~Vd--lvl~GH~H~y~r~~ 357 (458)
+|+||..-.|+...... ........|++|.++|.+.++. ++|+|.+|......
T Consensus 316 ~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 316 TWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp SEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEE
T ss_pred cEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeee
Confidence 99999988877443211 1122356788999999988775 88999999876654
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=221.95 Aligned_cols=294 Identities=17% Similarity=0.218 Sum_probs=203.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC-------CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE-------KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~-------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.|..-|-...+||.....|.|++-++ +....+||++.++..+.+-.++..+ ....++.+|+.++||+|+
T Consensus 36 rpaF~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a----~p~~dhtv~v~~~gL~P~ 111 (522)
T COG3540 36 RPAFTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIA----SPELDHTVHVDLRGLSPD 111 (522)
T ss_pred CCccccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccC----CcccCceEEEeccCCCCC
Confidence 45233334456777899999997652 2344667777665444333333222 235789999999999999
Q ss_pred CEEEEEeCCC-CccceEEEECCCCCCCC-CCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCC-----
Q 046207 126 TKYFYQLGSG-NATRRFHFTTPPKVGPD-VPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHP----- 198 (458)
Q Consensus 126 t~Y~Y~v~~g-~~~~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~----- 198 (458)
+.|+||+..| ..+++++|||+|+++.. .-++|+..+|.|++.+...+.+.+.+. +|||+||+||.+|+++..
T Consensus 112 ~~yfYRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~-~~D~viH~GDyIYeyg~~~~~~~ 190 (522)
T COG3540 112 QDYFYRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKE-EPDFVIHLGDYIYEYGPIPDEVS 190 (522)
T ss_pred ceEEEEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhc-CCCEEEEcCCeeeccCCcccccc
Confidence 9999999985 34679999999997654 456777777777777778888999888 899999999999998732
Q ss_pred --------------------CCchhHHHHH--HHHHHHHhhccceEEccCCcccCCCCCCCCcc--------cC-----c
Q 046207 199 --------------------QHDNRRWDSW--GRFVEKSTAYQAWIWVPGNHELDYAPEIGENV--------PF-----K 243 (458)
Q Consensus 199 --------------------~~~~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~--------~~-----~ 243 (458)
.+++.+|..+ ...++...+..||++.|.+||+..+...+..+ .+ .
T Consensus 191 ~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~ 270 (522)
T COG3540 191 LNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAA 270 (522)
T ss_pred cccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHH
Confidence 1234445443 35567777889999999999996543211111 01 1
Q ss_pred ccceeec-cccCCCCC--CCCceEEEEcCe-EEEEEecCCCcC------C----------------CChHHHHHHHHHhc
Q 046207 244 PYTHRYH-VPYRASQS--TSPLWYSIKRAS-AYIIVLSSYSAY------G----------------KYTPQYAWLEKELP 297 (458)
Q Consensus 244 ~~~~~f~-~P~~~~~~--~~~~~ys~~~g~-~~fi~Lds~~~~------~----------------~~~~Q~~WL~~~L~ 297 (458)
+++.++. ||.+.... ....|.+|.+|+ +.|.+||+.... + .+.+|.+||++.|.
T Consensus 271 A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~ 350 (522)
T COG3540 271 ARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLG 350 (522)
T ss_pred HHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhh
Confidence 1222222 67654332 247899999999 789999997542 1 15899999999999
Q ss_pred cccCCCCCeEEEEeccccccCC--CC---C--------CccchHHHHHHHHHHHHcCcc--EEEeccccccc
Q 046207 298 KVNRAETPWLIVLLHSPWYNSN--SY---H--------YMEGESMRVAFESWFVQHKVD--LVVAGHVHSYE 354 (458)
Q Consensus 298 ~~~~~~~~~~Iv~~H~P~~~~~--~~---~--------~~~~~~~~~~l~~ll~~~~Vd--lvl~GH~H~y~ 354 (458)
+ +++.|+|+..-.|+--.. .. . ...-..-|+.|...++..++. ++|+|.+|...
T Consensus 351 ~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 351 A---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred h---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 9 789999998888862111 00 0 001234588999999998875 89999999643
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-25 Score=207.81 Aligned_cols=217 Identities=19% Similarity=0.219 Sum_probs=150.2
Q ss_pred EEEEEecCCCCCCc---------HHH----HHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccce
Q 046207 156 IFGIIGDLGQTYDS---------NQT----FEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAW 221 (458)
Q Consensus 156 ~f~~~gD~~~~~~~---------~~~----l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~ 221 (458)
||+++||+|.+... ... ++.+.+. .+||+||++||+++.+. ...|+.+.+.++.+ .+|+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~~--~~p~ 73 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-----PESYERLRELLAAL--PIPV 73 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-----HHHHHHHHHHHhhc--CCCE
Confidence 69999999987432 222 3333333 38999999999998754 45566666766665 6899
Q ss_pred EEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCC----CChHHHHHHHHHhc
Q 046207 222 IWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYG----KYTPQYAWLEKELP 297 (458)
Q Consensus 222 ~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~----~~~~Q~~WL~~~L~ 297 (458)
+.++||||... .+...|..... .....+|+|+.++++||+||+..... ...+|++||++.|+
T Consensus 74 ~~v~GNHD~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~ 139 (240)
T cd07402 74 YLLPGNHDDRA-----------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALA 139 (240)
T ss_pred EEeCCCCCCHH-----------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHH
Confidence 99999999631 11122211000 12356889999999999999875321 25789999999999
Q ss_pred cccCCCCCeEEEEeccccccCCCCCC-ccchHHHHHHHHHHHHc-CccEEEeccccccccccccccceeeecCCcccccC
Q 046207 298 KVNRAETPWLIVLLHSPWYNSNSYHY-MEGESMRVAFESWFVQH-KVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVK 375 (458)
Q Consensus 298 ~~~~~~~~~~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~ 375 (458)
++. .+++|+++|+|++....... ......++.+.+++.++ +|+++|+||+|......
T Consensus 140 ~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~------------------ 198 (240)
T cd07402 140 EAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS------------------ 198 (240)
T ss_pred hCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE------------------
Confidence 853 45689999999976532111 11123367899999999 99999999999976543
Q ss_pred CCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEec
Q 046207 376 DPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKN 422 (458)
Q Consensus 376 ~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~ 422 (458)
.+|+.++++|+.|.... +.++..++.+..+||..+.+.+
T Consensus 199 -~~g~~~~~~gs~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 237 (240)
T cd07402 199 -WGGIPLLTAPSTCHQFA-------PDLDDFALDALAPGYRALSLHE 237 (240)
T ss_pred -ECCEEEEEcCcceeeec-------CCCCcccccccCCCCcEEEEec
Confidence 35678899998887542 2233445556678998888744
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=201.30 Aligned_cols=197 Identities=20% Similarity=0.225 Sum_probs=132.9
Q ss_pred eEEEEEecCCCCCC----------c----HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 155 YIFGIIGDLGQTYD----------S----NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 155 ~~f~~~gD~~~~~~----------~----~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
|||+++||+|.... + ..+++.+.+. +||+||++||+++.+... ....|+.+.+.++.+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~-~~d~vv~~GDlv~~~~~~--~~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE-SLDFVVQLGDIIDGDNAR--AEEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC-CCCEEEECCCeecCCCch--HHHHHHHHHHHHHhc--CCC
Confidence 79999999995531 1 2234445444 799999999999766411 124555555555544 589
Q ss_pred eEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc-------------------
Q 046207 221 WIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA------------------- 281 (458)
Q Consensus 221 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~------------------- 281 (458)
+++++||||+..... . .+...+ ....+..||+|+.++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~~----~---~~~~~~------~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
T cd07396 76 VHHVLGNHDLYNPSR----E---YLLLYT------LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNS 142 (267)
T ss_pred EEEecCccccccccH----h---hhhccc------ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhc
Confidence 999999999743210 0 000001 01124569999999999999999531
Q ss_pred -------------C--CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEE
Q 046207 282 -------------Y--GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLV 345 (458)
Q Consensus 282 -------------~--~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlv 345 (458)
+ ....+|++||+++|+++.. +.+++||++|+|++...... ......++.+.++++++ +|+++
T Consensus 143 ~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v 220 (267)
T cd07396 143 NLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKAC 220 (267)
T ss_pred hhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEE
Confidence 0 1247999999999998643 23568999999987654311 11122357888999996 89999
Q ss_pred EeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCC
Q 046207 346 VAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGN 390 (458)
Q Consensus 346 l~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~ 390 (458)
|+||+|.++... .+|+.|+++|+-..
T Consensus 221 ~~GH~H~~~~~~-------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 221 ISGHDHEGGYAQ-------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred EcCCcCCCCccc-------------------cCCeeEEEechhhc
Confidence 999999987532 45778888877554
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-23 Score=197.90 Aligned_cols=241 Identities=17% Similarity=0.184 Sum_probs=149.0
Q ss_pred EEECCCCCCCCCCeEEEEEecCCCCCC---------cH----HHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHH
Q 046207 142 HFTTPPKVGPDVPYIFGIIGDLGQTYD---------SN----QTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDS 207 (458)
Q Consensus 142 ~f~T~p~~~~~~~~~f~~~gD~~~~~~---------~~----~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~ 207 (458)
..+|.+. +..++||++++|+|.... .. ++++++.+. .+||+||++||+++.+. ...++.
T Consensus 4 ~~~~~~~--~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-----~~~~~~ 76 (275)
T PRK11148 4 LLTLPLA--GEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-----SEAYQH 76 (275)
T ss_pred ccccccC--CCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-----HHHHHH
Confidence 3456554 447899999999996321 12 234444443 37999999999998653 455666
Q ss_pred HHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc---CC-
Q 046207 208 WGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA---YG- 283 (458)
Q Consensus 208 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~---~~- 283 (458)
+.+.++.+ .+|+++++||||... .+. ..+ +..+ ....++.+..++++||+|||... .+
T Consensus 77 ~~~~l~~l--~~Pv~~v~GNHD~~~--------~~~---~~~--~~~~---~~~~~~~~~~~~~~~i~Lds~~~g~~~G~ 138 (275)
T PRK11148 77 FAEGIAPL--RKPCVWLPGNHDFQP--------AMY---SAL--QDAG---ISPAKHVLIGEHWQILLLDSQVFGVPHGE 138 (275)
T ss_pred HHHHHhhc--CCcEEEeCCCCCChH--------HHH---HHH--hhcC---CCccceEEecCCEEEEEecCCCCCCcCCE
Confidence 66666655 589999999999631 111 111 1100 01123334445699999999653 11
Q ss_pred CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCC-CCCccchHHHHHHHHHHHHc-CccEEEecccccccccccccc
Q 046207 284 KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNS-YHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYERTNRFSN 361 (458)
Q Consensus 284 ~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~-~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~~~~~ 361 (458)
...+|++||+++|+++. .+.+||++|||+..... +.........++|.++++++ +|+++|+||+|.....
T Consensus 139 l~~~ql~wL~~~L~~~~---~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~----- 210 (275)
T PRK11148 139 LSEYQLEWLERKLADAP---ERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL----- 210 (275)
T ss_pred eCHHHHHHHHHHHhhCC---CCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc-----
Confidence 25899999999999852 33456666665543322 11111223457899999998 8999999999985432
Q ss_pred ceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCC
Q 046207 362 VQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDN 436 (458)
Q Consensus 362 ~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg 436 (458)
..+|+.++++++.+..-.. ..+.+ .......||..+++.+++.+..++.+-.++
T Consensus 211 --------------~~~gi~~~~~ps~~~q~~~------~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~ 264 (275)
T PRK11148 211 --------------DWNGRRLLATPSTCVQFKP------HCTNF-TLDTVAPGWRELELHADGSLETEVHRLADT 264 (275)
T ss_pred --------------eECCEEEEEcCCCcCCcCC------CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCCC
Confidence 1356777777776643211 01111 122344699999997666676666654443
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-22 Score=187.90 Aligned_cols=190 Identities=19% Similarity=0.240 Sum_probs=123.6
Q ss_pred EEEEecCCCCCCcHH-------HHHHHHhCCCCcEEEEcCccccCCCCC----CCchhHHHHHHHHHHHHhh--ccceEE
Q 046207 157 FGIIGDLGQTYDSNQ-------TFEHYVSNPKGQAVLFVGDLSYADDHP----QHDNRRWDSWGRFVEKSTA--YQAWIW 223 (458)
Q Consensus 157 f~~~gD~~~~~~~~~-------~l~~~~~~~~pd~vl~~GDl~y~~~~~----~~~~~~~~~~~~~~~~l~~--~~P~~~ 223 (458)
|++++|+|.+....+ .+...++..+||++|++||+++..... .....+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 789999998743211 122333344999999999999765321 1235678777776655432 589999
Q ss_pred ccCCcccCCCCCCCCc-ccCcccceeeccccCCCCCCCCceEE--EEcCeEEEEEecCCCcC----------CCChHHHH
Q 046207 224 VPGNHELDYAPEIGEN-VPFKPYTHRYHVPYRASQSTSPLWYS--IKRASAYIIVLSSYSAY----------GKYTPQYA 290 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~-~~~~~~~~~f~~P~~~~~~~~~~~ys--~~~g~~~fi~Lds~~~~----------~~~~~Q~~ 290 (458)
++||||+......... ..+..|...+ ++ ...+|. ++.|+++||+|||.... ....+|++
T Consensus 82 v~GNHD~~~~~~~~~~~~~~~~y~~~~-~~-------~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~ 153 (256)
T cd07401 82 IRGNHDLFNIPSLDSENNYYRKYSATG-RD-------GSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLD 153 (256)
T ss_pred eCCCCCcCCCCCccchhhHHHHhheec-CC-------CccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHH
Confidence 9999998532221111 1111121111 11 122333 34589999999997421 12489999
Q ss_pred HHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccc
Q 046207 291 WLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFS 360 (458)
Q Consensus 291 WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~ 360 (458)
||+++|+++ .+.+++||++|+|+....... ....+ .+.++|++++|+++||||+|.+++..|+-
T Consensus 154 wL~~~L~~~--~~~~~~IV~~HhP~~~~~~~~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 154 RLEKELEKS--TNSNYTIWFGHYPTSTIISPS---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHHhc--ccCCeEEEEEcccchhccCCC---cchhH-HHHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 999999975 345689999999996532211 11222 38999999999999999999999966653
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-21 Score=177.22 Aligned_cols=150 Identities=19% Similarity=0.249 Sum_probs=110.3
Q ss_pred eEEEEEecCCCCCC-cH----HHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh-hccceEEcc
Q 046207 155 YIFGIIGDLGQTYD-SN----QTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST-AYQAWIWVP 225 (458)
Q Consensus 155 ~~f~~~gD~~~~~~-~~----~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~ 225 (458)
|||++++|+|.... .. ..++.+++ ..+||+||++||+++.+. ...+|+.+.+.++.+. ..+|+++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~----~~~~~~~~~~~~~~l~~~~~p~~~~~ 76 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGD----NDAEWEAADKAFARLDKAGIPYSVLA 76 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCC----CHHHHHHHHHHHHHHHHcCCcEEEEC
Confidence 68999999997543 11 22233332 238999999999998765 4668888888888886 579999999
Q ss_pred CCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCC
Q 046207 226 GNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETP 305 (458)
Q Consensus 226 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 305 (458)
||||. ++.+|+. ...+|++||+++|++. +.+
T Consensus 77 GNHD~------------------------------------------~~~ld~~----~~~~ql~WL~~~L~~~---~~~ 107 (214)
T cd07399 77 GNHDL------------------------------------------VLALEFG----PRDEVLQWANEVLKKH---PDR 107 (214)
T ss_pred CCCcc------------------------------------------hhhCCCC----CCHHHHHHHHHHHHHC---CCC
Confidence 99992 1223322 2489999999999984 345
Q ss_pred eEEEEeccccccCCCCCCcc-----chHHHHHHHHHHHHc-CccEEEecccccccccc
Q 046207 306 WLIVLLHSPWYNSNSYHYME-----GESMRVAFESWFVQH-KVDLVVAGHVHSYERTN 357 (458)
Q Consensus 306 ~~Iv~~H~P~~~~~~~~~~~-----~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~ 357 (458)
++||++|+|++......... ....++.|.++++++ +|+++||||.|.+.+..
T Consensus 108 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 108 PAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred CEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 68999999998654322111 123456788999999 79999999999998765
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=164.81 Aligned_cols=171 Identities=18% Similarity=0.257 Sum_probs=110.3
Q ss_pred HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHH----HHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccc
Q 046207 171 QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDS----WGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYT 246 (458)
Q Consensus 171 ~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~----~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~ 246 (458)
+.+..+.+..+||+||++||+++.+... ...+|.. |.+.+.++...+|++.++||||+....... ......|.
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~G~~~--~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~~~~~rf~ 111 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDGGRDW--ADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-LPVRQRFE 111 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccCCeeC--cHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-HHHHHHHH
Confidence 3444555555999999999999876511 2344543 333333322247999999999985432111 11223444
Q ss_pred eeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC-----CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCC
Q 046207 247 HRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY-----GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSY 321 (458)
Q Consensus 247 ~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~ 321 (458)
+.|. ...+++++|+++||+||+.... .....|.+||++.|+.. .....+||++|+|+|.....
T Consensus 112 ~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~--~~~~p~ILl~H~Plyr~~~~ 179 (257)
T cd08163 112 KYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMK--VKSKPRILLTHVPLYRPPNT 179 (257)
T ss_pred HHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhcc--CCCCcEEEEeccccccCCCC
Confidence 4442 2468899999999999997432 12467999999998874 23345899999999865432
Q ss_pred CCc---c---------ch----HH-HHHHHHHHHHcCccEEEeccccccccc
Q 046207 322 HYM---E---------GE----SM-RVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 322 ~~~---~---------~~----~~-~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
..+ + +. .+ .+.-..||++.++.+||+||+|.|-..
T Consensus 180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 111 0 00 01 234446788889999999999999654
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=168.98 Aligned_cols=193 Identities=20% Similarity=0.218 Sum_probs=123.5
Q ss_pred EEecCCCCCCcHH----HHHHHHhC-CCCcEEEEcCccccCCCCCCCchh----HHHHHHHHHHHHhhccceEEccCCcc
Q 046207 159 IIGDLGQTYDSNQ----TFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNR----RWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 159 ~~gD~~~~~~~~~----~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~----~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
-+|+.+.. .+.. +++.+.+. .+|||||++||++..+........ .+..+.+.++.....+|+++++||||
T Consensus 42 ~~G~~~CD-~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD 120 (296)
T cd00842 42 PWGDYGCD-SPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHD 120 (296)
T ss_pred CCcCcCCC-CcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCC
Confidence 35555532 2333 34444443 389999999999998763221111 23445566666667899999999999
Q ss_pred cCCCCCCC----CcccCcccceeec--cccCCC-CCCCCceEEEE-cCeEEEEEecCCCcCC-----------CChHHHH
Q 046207 230 LDYAPEIG----ENVPFKPYTHRYH--VPYRAS-QSTSPLWYSIK-RASAYIIVLSSYSAYG-----------KYTPQYA 290 (458)
Q Consensus 230 ~~~~~~~~----~~~~~~~~~~~f~--~P~~~~-~~~~~~~ys~~-~g~~~fi~Lds~~~~~-----------~~~~Q~~ 290 (458)
........ ....+..+...|. +|..+. ....+.||++. .++++||+|||...+. ....|++
T Consensus 121 ~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~ 200 (296)
T cd00842 121 SYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQ 200 (296)
T ss_pred CCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHH
Confidence 75321110 0111111222221 332111 11245789998 7899999999975421 2378999
Q ss_pred HHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcC--ccEEEeccccccccc
Q 046207 291 WLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHK--VDLVVAGHVHSYERT 356 (458)
Q Consensus 291 WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--Vdlvl~GH~H~y~r~ 356 (458)
||+++|+++++.+ ..++|++|+|+....... .....+.|.+++++|. |.++|+||+|..+-.
T Consensus 201 WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 201 WLEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 9999999975333 457889999997643221 1356789999999997 788999999987654
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-19 Score=158.78 Aligned_cols=190 Identities=20% Similarity=0.227 Sum_probs=101.3
Q ss_pred eEEEEEecCCCCCCcH----HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHH-HHHHHHhhccceEEccCCcc
Q 046207 155 YIFGIIGDLGQTYDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWG-RFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~----~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~-~~~~~l~~~~P~~~v~GNHD 229 (458)
+||+++||+|...... ..+.......++|+||++||+++.+. ....+.... ..........|+++++||||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 76 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGN----PSEEWRAQFWFFIRLLNPKIPVYFILGNHD 76 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSS----HHHHHHHHHHHHHHHHHTTTTEEEEE-TTS
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeecccccccc----ccccchhhhccchhhhhccccccccccccc
Confidence 6999999999875433 33333444449999999999999876 333322211 12334456799999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCC---hHHHHHHHHHhccccCCCCCe
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKY---TPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~---~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
+.......................... ..+........................ ..+..|+...++. ...++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 151 (200)
T PF00149_consen 77 YYSGNSFYGFYDYQFEDYYGNYNYYYS--YFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDDP 151 (200)
T ss_dssp SHHHHHHHHHHHHHHSSEEECSSEEEC--TESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEESE
T ss_pred cceeccccccccccccccccccccccc--cCcceeeecccccccccccccccccccccchhccccccccccc---ccccc
Confidence 742110000000000000000000000 000001111111122211111111111 2333333333333 45678
Q ss_pred EEEEeccccccCCCCCCc--cchHHHHHHHHHHHHcCccEEEecccccc
Q 046207 307 LIVLLHSPWYNSNSYHYM--EGESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
+||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 152 ~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 152 VIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred eeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 999999999876543221 12456789999999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=5e-17 Score=148.61 Aligned_cols=151 Identities=16% Similarity=0.175 Sum_probs=100.6
Q ss_pred CeEEEEEecCCCCCCc------------HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-ccc
Q 046207 154 PYIFGIIGDLGQTYDS------------NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQA 220 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~------------~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~P 220 (458)
.+||++++|+|..... ...+.++++..+||+||++||+++...... ..+..+.+.++.+.. .+|
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~---~~~~~~~~~~~~l~~~~~p 78 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTND---NSTSALDKAVSPMIDRKIP 78 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCch---HHHHHHHHHHHHHHHcCCC
Confidence 5899999999986432 223444455559999999999998765211 134455555665543 699
Q ss_pred eEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhcccc
Q 046207 221 WIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVN 300 (458)
Q Consensus 221 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~ 300 (458)
+++++||||.. . .....|++||+++|++..
T Consensus 79 ~~~~~GNHD~~-------------------------------------------------g-~l~~~ql~wL~~~l~~~~ 108 (199)
T cd07383 79 WAATFGNHDGY-------------------------------------------------D-WIRPSQIEWFKETSAALK 108 (199)
T ss_pred EEEECccCCCC-------------------------------------------------C-CCCHHHHHHHHHHHHHHh
Confidence 99999999910 0 123689999999999863
Q ss_pred --CCCCCeEEEEeccccccCCCC---------CCcc---chHHHH-HHHHHHHHcCccEEEecccccccccc
Q 046207 301 --RAETPWLIVLLHSPWYNSNSY---------HYME---GESMRV-AFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 301 --~~~~~~~Iv~~H~P~~~~~~~---------~~~~---~~~~~~-~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+....+.++++|+|+...... ...+ ...... .+..+.+..+|+++|+||+|.++...
T Consensus 109 ~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 109 KKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred hccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 224467999999998653211 0001 111223 34444566799999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-16 Score=155.64 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=72.2
Q ss_pred CCceEEEE-cCeEEEEEecCCCcC-----CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCC-----ccchH
Q 046207 260 SPLWYSIK-RASAYIIVLSSYSAY-----GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHY-----MEGES 328 (458)
Q Consensus 260 ~~~~ys~~-~g~~~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~-----~~~~~ 328 (458)
+..||+|+ .++++||+|||.... ....+|++||+++|++ .+.+++||++|||++....... +....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCCcccccccccccccccccc
Confidence 46799999 899999999997532 1258999999999998 3456799999999886533110 11122
Q ss_pred HHHHHHHHHHHc-CccEEEeccccccccc
Q 046207 329 MRVAFESWFVQH-KVDLVVAGHVHSYERT 356 (458)
Q Consensus 329 ~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~ 356 (458)
..++|.++|+++ +|.++||||.|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 357899999998 8999999999987543
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-16 Score=147.47 Aligned_cols=178 Identities=19% Similarity=0.181 Sum_probs=106.5
Q ss_pred EEEEecCCCCC--------Cc---HHHHHHHHh---CC--CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 157 FGIIGDLGQTY--------DS---NQTFEHYVS---NP--KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 157 f~~~gD~~~~~--------~~---~~~l~~~~~---~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
+.+++|+|... .. .+.++++.+ .. +||+||++||+++... ........+.++.+ ..|
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~-----~~~~~~~l~~l~~l--~~~ 73 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK-----LEEAKLDLAWIDAL--PGT 73 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC-----hHHHHHHHHHHHhC--CCC
Confidence 35789999763 11 233333332 22 8999999999986433 12222223333332 357
Q ss_pred eEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc----C---------C----
Q 046207 221 WIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA----Y---------G---- 283 (458)
Q Consensus 221 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~----~---------~---- 283 (458)
+++|+||||+... . . ..+.+. ++..+... ....++.++++.|++++.... + .
T Consensus 74 v~~V~GNHD~~~~-~---~---~~~~~~--l~~~~~~~--~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
T cd07393 74 KVLLKGNHDYWWG-S---A---SKLRKA--LEESRLAL--LFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEK 142 (232)
T ss_pred eEEEeCCccccCC-C---H---HHHHHH--HHhcCeEE--eccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHH
Confidence 8999999997311 0 1 111111 11100000 002334567888888763211 0 0
Q ss_pred CChHHHHHHHHHhccccCCC-CCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccc
Q 046207 284 KYTPQYAWLEKELPKVNRAE-TPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFS 360 (458)
Q Consensus 284 ~~~~Q~~WL~~~L~~~~~~~-~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~ 360 (458)
...+|++||++.|+++.... .+++|+++|+|++..... .+.+..++++++++++|+||+|..++..|+.
T Consensus 143 ~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~ 212 (232)
T cd07393 143 IFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICVYGHLHGVGRDRAIN 212 (232)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEEECCCCCCccccccc
Confidence 02568999999999864322 247899999998764321 2366788899999999999999999877664
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.4e-16 Score=140.79 Aligned_cols=167 Identities=13% Similarity=0.073 Sum_probs=101.7
Q ss_pred EEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCC
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEI 236 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 236 (458)
|+++||+|........ ..+ +..++|+||++||+++.+. ......+ +.+.. ...|+++++||||...
T Consensus 1 i~~~sD~H~~~~~~~~-~~~-~~~~~D~vv~~GDl~~~~~-----~~~~~~~-~~l~~--~~~p~~~v~GNHD~~~---- 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IIL-KAEEADAVIVAGDITNFGG-----KEAAVEI-NLLLA--IGVPVLAVPGNCDTPE---- 66 (188)
T ss_pred CEEEEecCCCHHHHHH-HHh-hccCCCEEEECCCccCcCC-----HHHHHHH-HHHHh--cCCCEEEEcCCCCCHH----
Confidence 5789999976432222 223 3348999999999998654 2222222 33332 2579999999999521
Q ss_pred CCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc------CCCChHHHHHHHHHhccccCCCCCeEEEE
Q 046207 237 GENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA------YGKYTPQYAWLEKELPKVNRAETPWLIVL 310 (458)
Q Consensus 237 ~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~------~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~ 310 (458)
........... ..+ ..+.++++.|+++++... .....+|++|+ +.|.. .+.+.+|++
T Consensus 67 ----~~~~~~~~~~~-------~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv 129 (188)
T cd07392 67 ----ILGLLTSAGLN-------LHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILV 129 (188)
T ss_pred ----HHHhhhcCcEe-------cCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEE
Confidence 00000000000 011 234567899999997532 12246889998 44444 334568999
Q ss_pred eccccccC-CCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 311 LHSPWYNS-NSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 311 ~H~P~~~~-~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
+|+|++.. ............+.+.+++++++++++||||+|.-.
T Consensus 130 ~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 130 THAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred ECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 99999763 111110101124678889999999999999999864
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.6e-16 Score=144.53 Aligned_cols=177 Identities=14% Similarity=0.089 Sum_probs=104.9
Q ss_pred EEEEEecCCCCCCc---HH----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCc
Q 046207 156 IFGIIGDLGQTYDS---NQ----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 156 ~f~~~gD~~~~~~~---~~----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 228 (458)
||++++|+|..... .. .++.+.+. ++|+||++||++.... ....+.+.+..+ ...|++.++|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~-~~d~vv~~GDl~~~~~-------~~~~~~~~l~~~-~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ-KIDHLHIAGDISNDFQ-------RSLPFIEKLQEL-KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc-CCCEEEECCccccchh-------hHHHHHHHHHHh-cCCcEEEECCCC
Confidence 58999999965221 22 23334444 8999999999997421 122333333332 358999999999
Q ss_pred ccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC--------------------------
Q 046207 229 ELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY-------------------------- 282 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~-------------------------- 282 (458)
|+..... +..+...+. .....+.++.+..++++|++++...++
T Consensus 72 D~~~~~~------~~~~~~~~~-----~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (239)
T TIGR03729 72 DMLKDLT------YEEIESNDS-----PLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKR 140 (239)
T ss_pred CCCCCCC------HHHHHhccc-----hhhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCC
Confidence 9741110 011111110 000112233344467888888842211
Q ss_pred C-----CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCC----C--CCcc-c-hHHHHHHHHHHHHcCccEEEecc
Q 046207 283 G-----KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNS----Y--HYME-G-ESMRVAFESWFVQHKVDLVVAGH 349 (458)
Q Consensus 283 ~-----~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~----~--~~~~-~-~~~~~~l~~ll~~~~Vdlvl~GH 349 (458)
. ...+|++||++.|+++. .+.+||++|+|+..... . .... . ....+.|.+++++++|+++|+||
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH 217 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGH 217 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECC
Confidence 0 02678999999998852 24489999999854211 0 1100 0 11246888999999999999999
Q ss_pred cccccc
Q 046207 350 VHSYER 355 (458)
Q Consensus 350 ~H~y~r 355 (458)
+|.-..
T Consensus 218 ~H~~~~ 223 (239)
T TIGR03729 218 LHRRFG 223 (239)
T ss_pred ccCCCC
Confidence 998653
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.6e-15 Score=142.96 Aligned_cols=179 Identities=18% Similarity=0.199 Sum_probs=115.5
Q ss_pred eEEEEEecCCCC--CC-cHHHH----HHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCC
Q 046207 155 YIFGIIGDLGQT--YD-SNQTF----EHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGN 227 (458)
Q Consensus 155 ~~f~~~gD~~~~--~~-~~~~l----~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GN 227 (458)
++|+.++|+|.. .. ....+ +++... +||+||++||+++.+. ...++...++++......|++++|||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~-~~D~~v~tGDl~~~~~-----~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQL-KPDLLVVTGDLTNDGE-----PEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcC-CCCEEEEccCcCCCCC-----HHHHHHHHHHHhhccCCCceEeeCCC
Confidence 589999999987 22 23333 333333 8999999999999853 55666666677655557899999999
Q ss_pred cccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEc-CeEEEEEecCCCcC----CCChHHHHHHHHHhccccCC
Q 046207 228 HELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKR-ASAYIIVLSSYSAY----GKYTPQYAWLEKELPKVNRA 302 (458)
Q Consensus 228 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~-g~~~fi~Lds~~~~----~~~~~Q~~WL~~~L~~~~~~ 302 (458)
||.... ....+...+... ...+..... ++++++++|+...- ..+..|++||++.|++....
T Consensus 75 HD~~~~-------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~ 140 (301)
T COG1409 75 HDARVV-------NGEAFSDQFFNR-------YAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPER 140 (301)
T ss_pred CcCCch-------HHHHhhhhhccc-------CcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccc
Confidence 997421 111222122111 011111122 67899999997642 23589999999999985332
Q ss_pred CCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcC--ccEEEecccccc
Q 046207 303 ETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHK--VDLVVAGHVHSY 353 (458)
Q Consensus 303 ~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--Vdlvl~GH~H~y 353 (458)
....+|+++|||+.................+..++..++ |+++|+||.|.-
T Consensus 141 ~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 141 AKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred cCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 112467777777765443322222333456777888888 999999999976
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=7e-15 Score=127.20 Aligned_cols=116 Identities=22% Similarity=0.246 Sum_probs=84.6
Q ss_pred EEEEecCCCCCCcHH-----------HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhc-cceEEc
Q 046207 157 FGIIGDLGQTYDSNQ-----------TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAY-QAWIWV 224 (458)
Q Consensus 157 f~~~gD~~~~~~~~~-----------~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v 224 (458)
|++++|+|.+..... .++.+.+ .++|+|+++||+++.+. ...|+.+.+.++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~-~~~d~vi~~GDl~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKA-LDPDLVVITGDLTQRGL-----PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhc-cCCCEEEECCCCCCCCC-----HHHHHHHHHHHHHccccCCcEEEe
Confidence 578999998754211 1222333 39999999999998764 46677777777777543 699999
Q ss_pred cCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCC
Q 046207 225 PGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304 (458)
Q Consensus 225 ~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 304 (458)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999992
Q ss_pred CeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 305 ~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
|+++|+|++....... .....++.+.+++++++++++++||+|.....
T Consensus 81 ---iv~~Hhp~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ---IVVLHHPLVPPPGSGR-ERLLDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ---EEEecCCCCCCCcccc-ccCCCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 8899999976533211 11114667999999999999999999987653
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-14 Score=132.37 Aligned_cols=178 Identities=11% Similarity=0.136 Sum_probs=102.9
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 153 VPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
...|++++||+|......+.+.+..++.++|+||++||+++.+. ..+.+..+.+.+..+ ..|+++++||||...
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~----~~~~~~~~l~~l~~l--~~pv~~V~GNhD~~v 76 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAA----KSEDYAAFFRILGEA--HLPTFYVPGPQDAPL 76 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCC----CHHHHHHHHHHHHhc--CCceEEEcCCCChHH
Confidence 45799999999965333333333333338999999999998652 123333334433332 479999999999410
Q ss_pred CCCCCCcccCc-ccceeeccccCCCCCCCCceEEEEc-CeEEEEEecCCCcC--CCChHHH----HHHHH-HhccccCCC
Q 046207 233 APEIGENVPFK-PYTHRYHVPYRASQSTSPLWYSIKR-ASAYIIVLSSYSAY--GKYTPQY----AWLEK-ELPKVNRAE 303 (458)
Q Consensus 233 ~~~~~~~~~~~-~~~~~f~~P~~~~~~~~~~~ys~~~-g~~~fi~Lds~~~~--~~~~~Q~----~WL~~-~L~~~~~~~ 303 (458)
...+. .|......|.. .. ....+ ..+ |+++|++|+....+ ...++|. +||.+ .|+...+..
T Consensus 77 ------~~~l~~~~~~~~~~p~~-~~-lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~~ 146 (224)
T cd07388 77 ------WEYLREAYNAELVHPEI-RN-VHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK 146 (224)
T ss_pred ------HHHHHHHhcccccCccc-ee-cCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhCC
Confidence 00000 11101111210 00 11122 333 56999999965543 2234442 56433 222221123
Q ss_pred CCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccc
Q 046207 304 TPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVH 351 (458)
Q Consensus 304 ~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H 351 (458)
.+..|+++|+|++..+..|. -.+.+..+++++++.+++|||.|
T Consensus 147 ~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 147 DYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred CCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 44689999999998743232 24578889999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-14 Score=135.84 Aligned_cols=193 Identities=20% Similarity=0.095 Sum_probs=111.1
Q ss_pred CeEEEEEecCCCCCCc-----HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCc
Q 046207 154 PYIFGIIGDLGQTYDS-----NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~-----~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 228 (458)
++||++++|+|..... .+.++.+.+. +||+||++||+++... ... +.+.+.++.+....|++.++|||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~-~~d~vl~~GD~~~~~~----~~~--~~~~~~l~~l~~~~~v~~v~GNH 73 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINAL-KPDLVVLTGDLVDGSV----DVL--ELLLELLKKLKAPLGVYAVLGNH 73 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhcc-CCCEEEEcCcccCCcc----hhh--HHHHHHHhccCCCCCEEEECCCc
Confidence 4799999999987432 2233334444 8999999999998764 111 34556666665678999999999
Q ss_pred ccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeE--EEEEecCCCcCCCChHHHHHHHHHhccccCCCCCe
Q 046207 229 ELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASA--YIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~--~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
|+..... ..+........+. ...+....++.++. .+++++.. ....+++.+.+++. .+.++
T Consensus 74 D~~~~~~----~~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~~------~~~~~~~~~~~~~~--~~~~~ 136 (223)
T cd07385 74 DYYSGDE----ENWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDDG------LGRRPDLEKALKGL--DEDDP 136 (223)
T ss_pred ccccCch----HHHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccCc------cccCCCHHHHHhCC--CCCCC
Confidence 9753211 0000010000000 01223444555543 34443321 12234566666654 34567
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccccccccee------eecCCcccccCCCCCC
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY------NITNGISTPVKDPSAP 380 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~------~~~~g~~~~~~~~~g~ 380 (458)
.|++.|.|.+.. .+.+.++|++++||+|..|...|...... ....|. +...+..
T Consensus 137 ~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~---~~~~~~~ 196 (223)
T cd07385 137 NILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGL---YRKGGSQ 196 (223)
T ss_pred EEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCcccceE---EEECCEE
Confidence 999999986321 12567899999999999997765543210 001111 1234456
Q ss_pred eEEEeCCCCC
Q 046207 381 VYLTIGDGGN 390 (458)
Q Consensus 381 ~yiv~G~gG~ 390 (458)
+||..|.|..
T Consensus 197 ~~Vs~G~G~~ 206 (223)
T cd07385 197 LYVSRGLGTW 206 (223)
T ss_pred EEEcCCccCC
Confidence 7787777764
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=3e-14 Score=126.37 Aligned_cols=145 Identities=19% Similarity=0.307 Sum_probs=87.1
Q ss_pred EEEEecCCCCCCcHHH-HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCC
Q 046207 157 FGIIGDLGQTYDSNQT-FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPE 235 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~-l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 235 (458)
|+++||+|........ +.......++|+++++||+++... ...+.. .........|+++++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~-----~~~~~~---~~~~~~~~~~v~~v~GNHD~~---- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTD-----APRFAP---LLLALKGFEPVIYVPGNHEFY---- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcc-----hHHHHH---HHHhhcCCccEEEeCCCcceE----
Confidence 5789999987543222 212223348999999999998653 222221 223333467999999999952
Q ss_pred CCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCC-ChHHHHHHHHHhccccCCCCCeEEEEeccc
Q 046207 236 IGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGK-YTPQYAWLEKELPKVNRAETPWLIVLLHSP 314 (458)
Q Consensus 236 ~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~-~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P 314 (458)
+.|++.....++.. ..++.+|+.++++ +.+||++|||
T Consensus 69 -----------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 69 -----------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred -----------------------------------EEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCCC
Confidence 11222211111111 2344555554444 3489999999
Q ss_pred cccCCCCC----CccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 315 WYNSNSYH----YMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 315 ~~~~~~~~----~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
+....... .......++.+..++++++|++++|||+|....
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 97654321 111224455677888899999999999998743
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-13 Score=131.22 Aligned_cols=195 Identities=14% Similarity=0.091 Sum_probs=108.6
Q ss_pred CCCCeEEEEEecCCCCCC-cHHHH----HHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEcc
Q 046207 151 PDVPYIFGIIGDLGQTYD-SNQTF----EHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVP 225 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~-~~~~l----~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 225 (458)
...++||+++||+|.+.. ....+ +.+.+. +||+|+++||+++.+. ...++.+.+.++.+.+..|+++|+
T Consensus 46 ~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~-~pDlVli~GD~~d~~~-----~~~~~~~~~~L~~L~~~~pv~~V~ 119 (271)
T PRK11340 46 NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQ-KPDLILLGGDYVLFDM-----PLNFSAFSDVLSPLAECAPTFACF 119 (271)
T ss_pred CCCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhc-CCCEEEEccCcCCCCc-----cccHHHHHHHHHHHhhcCCEEEec
Confidence 345799999999998632 22223 333344 9999999999997432 123445666777776668999999
Q ss_pred CCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcC--eEEEEEecCCCcCCCChHHHHHHHHHhccccCCC
Q 046207 226 GNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRA--SAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAE 303 (458)
Q Consensus 226 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g--~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~ 303 (458)
||||+..... ....+...+ -..+.....+....+..+ .+.++++|.... +... ..+.+++
T Consensus 120 GNHD~~~~~~-----~~~~~~~~l--~~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~----- 181 (271)
T PRK11340 120 GNHDRPVGTE-----KNHLIGETL--KSAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA----- 181 (271)
T ss_pred CCCCcccCcc-----chHHHHHHH--HhcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC-----
Confidence 9999742110 000111111 001111112334445444 367778764221 1111 1122222
Q ss_pred CCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceee------ecCCcccccCCC
Q 046207 304 TPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYN------ITNGISTPVKDP 377 (458)
Q Consensus 304 ~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~------~~~g~~~~~~~~ 377 (458)
....|++.|.|-.- +.+.+.++||+||||+|.-|-..|..+.... ...|. +...
T Consensus 182 ~~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~~~~~~~~~~~~~~~~G~---~~~~ 241 (271)
T PRK11340 182 NLPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGL---NAFG 241 (271)
T ss_pred CCCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccccCccccccccCcccCCc---EEeC
Confidence 34589999999631 1234578999999999998876554322110 01121 1223
Q ss_pred CCCeEEEeCCCC
Q 046207 378 SAPVYLTIGDGG 389 (458)
Q Consensus 378 ~g~~yiv~G~gG 389 (458)
+..+||..|-|.
T Consensus 242 ~~~l~Vs~G~G~ 253 (271)
T PRK11340 242 ERQIYTTRGVGS 253 (271)
T ss_pred CcEEEEeCCccC
Confidence 455677777774
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=127.07 Aligned_cols=187 Identities=17% Similarity=0.109 Sum_probs=104.9
Q ss_pred EEEEEecCCCCCCc------------HHHHHHHH---hCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh-hcc
Q 046207 156 IFGIIGDLGQTYDS------------NQTFEHYV---SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST-AYQ 219 (458)
Q Consensus 156 ~f~~~gD~~~~~~~------------~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~-~~~ 219 (458)
||++++|+|.+... ..++++++ .+.++|+||++||+++.... ....+..+.+.++.+. ..+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 77 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNP---SPEALELLIEALRRLKEAGI 77 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCC---CHHHHHHHHHHHHHHHHCCC
Confidence 68999999987431 12233332 22399999999999986541 2334555666666664 378
Q ss_pred ceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccc
Q 046207 220 AWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKV 299 (458)
Q Consensus 220 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~ 299 (458)
|+++++||||........ .....+. .+..-.............+...++.|++++..... ....+.++++..+...
T Consensus 78 ~v~~~~GNHD~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~~ 153 (223)
T cd00840 78 PVFIIAGNHDSPSRLGAL--SPLLALS-GLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRPL 153 (223)
T ss_pred CEEEecCCCCCccccccc--cchHhhC-cEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhcc
Confidence 999999999975322110 0000010 00000000000011223344556888988864321 1133444444454443
Q ss_pred cCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 300 NRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 300 ~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+....|+++|.|+......... . .......+...++|++++||.|..+.
T Consensus 154 --~~~~~~Il~~H~~~~~~~~~~~~---~-~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 154 --DPDDFNILLLHGGVAGAGPSDSE---R-APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred --CCCCcEEEEEeeeeecCCCCccc---c-cccCcHhhcCcCCCEEECCCcccCee
Confidence 34567899999998654322111 0 12333456678899999999998764
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-12 Score=120.76 Aligned_cols=196 Identities=19% Similarity=0.252 Sum_probs=108.4
Q ss_pred CCCeEEEEEecCCCCCC--------------------cHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHH
Q 046207 152 DVPYIFGIIGDLGQTYD--------------------SNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRF 211 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~ 211 (458)
..+|||+.++|+|.+.. ....+.++++..+||+|+++||+++... -...-..+.+.
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~----t~Da~~sl~kA 126 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHS----TQDAATSLMKA 126 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccc----cHhHHHHHHHH
Confidence 46799999999998743 1234667777779999999999999854 12222335666
Q ss_pred HHHHh-hccceEEccCCcccCCCCCCCCcccCcccceeeccccCCC--CCCCCceE-EEEcCe-----------------
Q 046207 212 VEKST-AYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS--QSTSPLWY-SIKRAS----------------- 270 (458)
Q Consensus 212 ~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--~~~~~~~y-s~~~g~----------------- 270 (458)
+++.. .++||.+++||||-+..-. ......+... +|..-+ ......-| -..+|+
T Consensus 127 vaP~I~~~IPwA~~lGNHDdes~lt---r~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~s 201 (379)
T KOG1432|consen 127 VAPAIDRKIPWAAVLGNHDDESDLT---RLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENKS 201 (379)
T ss_pred hhhHhhcCCCeEEEecccccccccC---HHHHHHHHhc--CCCccccCCCcccceeeeecccceEEEeccCCCcccccCc
Confidence 77654 4899999999999532110 0000111110 221100 00000011 111111
Q ss_pred -EEEEEecCCCc---------CC-CChHHHHHHHHHhccc---cCCCCC-eEEEEeccccccCC--CC---C---Ccc--
Q 046207 271 -AYIIVLSSYSA---------YG-KYTPQYAWLEKELPKV---NRAETP-WLIVLLHSPWYNSN--SY---H---YME-- 325 (458)
Q Consensus 271 -~~fi~Lds~~~---------~~-~~~~Q~~WL~~~L~~~---~~~~~~-~~Iv~~H~P~~~~~--~~---~---~~~-- 325 (458)
..+.+||+..+ |+ ....|..||+..-.+- +..-.| .-+++.|.|+-... .. . ..+
T Consensus 202 v~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~ 281 (379)
T KOG1432|consen 202 VFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGV 281 (379)
T ss_pred eeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeeccc
Confidence 23456666433 11 1378999999887331 111122 46889999973211 11 0 001
Q ss_pred -chHHHHHHHHHHH-HcCccEEEeccccccccc
Q 046207 326 -GESMRVAFESWFV-QHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 326 -~~~~~~~l~~ll~-~~~Vdlvl~GH~H~y~r~ 356 (458)
.......+...|. +.+|+.|+|||+|...-.
T Consensus 282 ~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC 314 (379)
T KOG1432|consen 282 SASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFC 314 (379)
T ss_pred cccccccHHHHHHHhccCcceEEecccccccee
Confidence 1112234555555 789999999999986554
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.4e-13 Score=132.77 Aligned_cols=92 Identities=18% Similarity=0.261 Sum_probs=64.9
Q ss_pred CceEEEE-cCeE--EEEEecCCCcC-----------CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCC-C----
Q 046207 261 PLWYSIK-RASA--YIIVLSSYSAY-----------GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNS-Y---- 321 (458)
Q Consensus 261 ~~~ys~~-~g~~--~fi~Lds~~~~-----------~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~-~---- 321 (458)
..+|+|+ .|++ ++|+||+.... ....+|++||+++|+.+.. +.+++|+++|+|+.+... .
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 4599999 5855 99999987521 1248999999999998642 456788888888775221 1
Q ss_pred CC--------ccchHHHHHHHHHHHHc-CccEEEecccccc
Q 046207 322 HY--------MEGESMRVAFESWFVQH-KVDLVVAGHVHSY 353 (458)
Q Consensus 322 ~~--------~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y 353 (458)
.. ..+.....+|..+|.+| +|.++||||.|..
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 10 00111224799999999 6999999999964
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.2e-14 Score=102.43 Aligned_cols=62 Identities=35% Similarity=0.663 Sum_probs=41.4
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEE
Q 046207 378 SAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQ 444 (458)
Q Consensus 378 ~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~ 444 (458)
++|||||+|+||+.+ ..+..++|+|++++...|||++|+|.|+|+|.|+|+++.||+ +.|+|
T Consensus 1 kapVhiv~G~aG~~l---~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~--v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGL---DPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGS--VLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T---CEE-
T ss_pred CCCEEEEECcCCCCc---ccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCc--EecCC
Confidence 378999999999943 456778899999999999999999999999999999999999 89997
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.8e-12 Score=109.07 Aligned_cols=117 Identities=25% Similarity=0.288 Sum_probs=83.4
Q ss_pred EEEecCCCCCCcHHHHH--HHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCC
Q 046207 158 GIIGDLGQTYDSNQTFE--HYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPE 235 (458)
Q Consensus 158 ~~~gD~~~~~~~~~~l~--~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 235 (458)
+++||+|.......... ...+..++|+||++||+++... ...+..+...........|++.++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~GNHD------ 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGP-----DPEEVLAAALALLLLLGIPVYVVPGNHD------ 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCC-----CchHHHHHHHHHhhcCCCCEEEeCCCce------
Confidence 36899998765444332 3333349999999999999775 2233333223333445789999999999
Q ss_pred CCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEecccc
Q 046207 236 IGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPW 315 (458)
Q Consensus 236 ~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~ 315 (458)
|+++|.|+
T Consensus 70 ------------------------------------------------------------------------i~~~H~~~ 77 (131)
T cd00838 70 ------------------------------------------------------------------------ILLTHGPP 77 (131)
T ss_pred ------------------------------------------------------------------------EEEeccCC
Confidence 89999999
Q ss_pred ccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 316 YNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 316 ~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+.............++.+..++.+.+++++|+||.|.+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 78 YDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred CCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 765543221122257788899999999999999999998865
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.9e-12 Score=108.69 Aligned_cols=154 Identities=21% Similarity=0.263 Sum_probs=90.2
Q ss_pred eEEEEEecCCCCCCcH-HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCC
Q 046207 155 YIFGIIGDLGQTYDSN-QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYA 233 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 233 (458)
+||+++||+|...... +.++.+ + ++|+|+++||+++. ..+.+.++.+ |++++.||||..
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~-~~d~vi~~GDi~~~-----------~~~~~~~~~~----~~~~v~GNHD~~-- 60 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--N-EPDFVIILGDIFDP-----------EEVLELLRDI----PVYVVRGNHDNW-- 60 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--T-TESEEEEES-SCSH-----------HHHHHHHHHH----EEEEE--CCHST--
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--c-CCCEEEECCCchhH-----------HHHHHHHhcC----CEEEEeCCcccc--
Confidence 6999999999874332 233434 3 79999999999862 3344444443 999999999942
Q ss_pred CCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEecc
Q 046207 234 PEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHS 313 (458)
Q Consensus 234 ~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~ 313 (458)
. +...... . . +.+.+.. .-....|+++|.
T Consensus 61 -------~---~~~~~~~---------~-~----------------------------~~~~~~~---~~~~~~i~~~H~ 89 (156)
T PF12850_consen 61 -------A---FPNENDE---------E-Y----------------------------LLDALRL---TIDGFKILLSHG 89 (156)
T ss_dssp -------H---HHSEECT---------C-S----------------------------SHSEEEE---EETTEEEEEESS
T ss_pred -------c---chhhhhc---------c-c----------------------------cccceee---eecCCeEEEECC
Confidence 0 1111000 0 0 1111111 112458899998
Q ss_pred ccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCC
Q 046207 314 PWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEG 393 (458)
Q Consensus 314 P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~ 393 (458)
+.+... ...+.+..++...+++++|+||.|..+... .+++.++..|+-+....
T Consensus 90 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-------------------~~~~~~~~~Gs~~~~~~ 142 (156)
T PF12850_consen 90 HPYDVQ--------WDPAELREILSRENVDLVLHGHTHRPQVFK-------------------IGGIHVINPGSIGGPRH 142 (156)
T ss_dssp TSSSST--------TTHHHHHHHHHHTTSSEEEESSSSSEEEEE-------------------ETTEEEEEE-GSSS-SS
T ss_pred CCcccc--------cChhhhhhhhcccCCCEEEcCCcccceEEE-------------------ECCEEEEECCcCCCCCC
Confidence 776532 112356677889999999999999977643 34567888887665421
Q ss_pred CCCCCCCCCCCCcceeeCceeEEEEEEec
Q 046207 394 LADRYTEPQPSYSAYREASFGHAMLEIKN 422 (458)
Q Consensus 394 ~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~ 422 (458)
. . .-+|+.+++.+
T Consensus 143 -----~----------~-~~~~~i~~~~~ 155 (156)
T PF12850_consen 143 -----G----------D-QSGYAILDIED 155 (156)
T ss_dssp -----S----------S-SEEEEEEEETT
T ss_pred -----C----------C-CCEEEEEEEec
Confidence 0 1 35899998854
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-11 Score=104.32 Aligned_cols=117 Identities=20% Similarity=0.215 Sum_probs=75.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCC
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPE 235 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 235 (458)
||+++||+|.... .....++|+++++||+++.+. ...++.+.+.++.+. ..++++++||||...
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~-----~~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~--- 64 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGT-----LEELQKFLDWLKSLP-HPHKIVIAGNHDLTL--- 64 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHhCC-CCeEEEEECCCCCcC---
Confidence 5899999997643 223338999999999997653 334444555555442 223578999999420
Q ss_pred CCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEecccc
Q 046207 236 IGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPW 315 (458)
Q Consensus 236 ~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~ 315 (458)
. . ..+.|+++|.|+
T Consensus 65 -------~------------------------------------------------------~-----~~~~ilv~H~~p 78 (135)
T cd07379 65 -------D------------------------------------------------------P-----EDTDILVTHGPP 78 (135)
T ss_pred -------C------------------------------------------------------C-----CCCEEEEECCCC
Confidence 0 1 124688999999
Q ss_pred ccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 316 YNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 316 ~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
+............-.+.+.+++++.+++++|+||+|...
T Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 79 YGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred CcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 765432111011113456677888999999999999874
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.8e-11 Score=112.43 Aligned_cols=83 Identities=17% Similarity=0.079 Sum_probs=60.5
Q ss_pred ECCCCCCCCCCeEEEEEecCCCCCCc---HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 144 TTPPKVGPDVPYIFGIIGDLGQTYDS---NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 144 ~T~p~~~~~~~~~f~~~gD~~~~~~~---~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
.++..+....+++|+.++|+|..... .+.+.++... .||+|+++||+++.. .......+.+.++++.+..+
T Consensus 34 ~~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~-~~DlivltGD~~~~~-----~~~~~~~~~~~L~~L~~~~g 107 (284)
T COG1408 34 LTPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANE-LPDLIVLTGDYVDGD-----RPPGVAALALFLAKLKAPLG 107 (284)
T ss_pred ecCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhc-CCCEEEEEeeeecCC-----CCCCHHHHHHHHHhhhccCC
Confidence 34444334578999999999987544 2233344444 789999999999862 23455667788888888899
Q ss_pred eEEccCCcccCC
Q 046207 221 WIWVPGNHELDY 232 (458)
Q Consensus 221 ~~~v~GNHD~~~ 232 (458)
+++++||||+..
T Consensus 108 v~av~GNHd~~~ 119 (284)
T COG1408 108 VFAVLGNHDYGV 119 (284)
T ss_pred EEEEeccccccc
Confidence 999999999853
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.6e-10 Score=105.29 Aligned_cols=64 Identities=23% Similarity=0.296 Sum_probs=42.8
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
+||+++||+|.... ......+. ..+||+||++||+++.. . .+.+.+..+ ..|+++++||||...
T Consensus 1 ~rIa~isDiHg~~~-~~~~~~l~-~~~pD~Vl~~GDi~~~~-------~---~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWD-LEDIKALH-LLQPDLVLFVGDFGNES-------V---QLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCch-HHHHHHHh-ccCCCEEEECCCCCcCh-------H---HHHHHHHhC--CCCeEEEcCCCcccc
Confidence 58999999996532 22233343 34899999999998531 1 222333332 479999999999754
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=5e-11 Score=106.50 Aligned_cols=111 Identities=19% Similarity=0.325 Sum_probs=71.6
Q ss_pred HHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHH---hhccceEEccCCcccCCCCCCCCcccCcccceeeccc
Q 046207 176 YVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS---TAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVP 252 (458)
Q Consensus 176 ~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l---~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P 252 (458)
.+...+||+|+++||+++.+... ...+|....+.+.++ ...+|++.++||||++..... ....-.+||.
T Consensus 37 a~~~l~PD~Vi~lGDL~D~G~~~--~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~----~~~~~v~RF~-- 108 (195)
T cd08166 37 ALNFVQPDIVIFLGDLMDEGSIA--NDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEED----PIESKIRRFE-- 108 (195)
T ss_pred HHhccCCCEEEEeccccCCCCCC--CHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCC----cCHHHHHHHH--
Confidence 33344999999999999998732 233454433333333 236899999999998532110 0011122331
Q ss_pred cCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHH
Q 046207 253 YRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVA 332 (458)
Q Consensus 253 ~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~ 332 (458)
.+| |++.|.|+..... ..
T Consensus 109 ---------~~F-------------------------------------------i~lsH~P~~~~~~----------~~ 126 (195)
T cd08166 109 ---------KYF-------------------------------------------IMLSHVPLLAEGG----------QA 126 (195)
T ss_pred ---------Hhh-------------------------------------------eeeeccccccccc----------HH
Confidence 011 8999999975322 16
Q ss_pred HHHHHHHcCccEEEeccccccccc
Q 046207 333 FESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 333 l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
+..++.+++++++|+||.|.+...
T Consensus 127 ~~~~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 127 LKHVVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred HHHHHHhcCceEEEEcCccceeeE
Confidence 677889999999999999987664
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.18 E-value=2e-10 Score=102.44 Aligned_cols=177 Identities=17% Similarity=0.196 Sum_probs=89.1
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHH--------------------------H
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWD--------------------------S 207 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~--------------------------~ 207 (458)
+-++++++|.+...+....+..+++..+||+|+++||+.-... ...+|. .
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a----~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ 80 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEA----RSDEYERAQEEQREPDKSEINEEECYDSEALDK 80 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCH----HHHHHHHHHHTT----THHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccch----hhhHHHHHhhhccCcchhhhhhhhhhhHHHHHH
Confidence 4589999999765444444444444449999999999986543 334444 3
Q ss_pred HHHHHHHHhhccceEEccCCcccCCCCCCCCcccC--cccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc-CCC
Q 046207 208 WGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPF--KPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA-YGK 284 (458)
Q Consensus 208 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~--~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~-~~~ 284 (458)
|++.+..+ .+|++++|||||-.. ..| .+|......|.-. .-...+.+.-|...++++..... ...
T Consensus 81 ff~~L~~~--~~p~~~vPG~~Dap~-------~~~lr~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~ 148 (255)
T PF14582_consen 81 FFRILGEL--GVPVFVVPGNMDAPE-------RFFLREAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQR 148 (255)
T ss_dssp HHHHHHCC---SEEEEE--TTS-SH-------HHHHHHHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-
T ss_pred HHHHHHhc--CCcEEEecCCCCchH-------HHHHHHHhccceecccee---eeeeeecccCCcEEEEecCccccCCCc
Confidence 44444332 689999999999410 000 0111111111100 00112334445577777765431 000
Q ss_pred --------ChHHHHHHHHHhccccCCCCCeEEEEecccc-ccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 285 --------YTPQYAWLEKELPKVNRAETPWLIVLLHSPW-YNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 285 --------~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
.....+|..+.|.+++ ..-+|+++|.|+ ...+..+. -.+.+.+++++++.+++||||.|.-.
T Consensus 149 ~~~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~-----GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 149 EEEFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHV-----GSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp BCSSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTT-----SBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred cccccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCcccc-----cHHHHHHHHHhcCCcEEEecccccch
Confidence 1234566677777752 234788899999 43332222 23578889999999999999999643
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.7e-10 Score=107.24 Aligned_cols=176 Identities=15% Similarity=0.158 Sum_probs=91.0
Q ss_pred eEEEEEecCCCCCCcHH---HHHHHHhC--CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhc-cceEEccCCc
Q 046207 155 YIFGIIGDLGQTYDSNQ---TFEHYVSN--PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAY-QAWIWVPGNH 228 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~---~l~~~~~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v~GNH 228 (458)
+|++++||+|.+..... .+.+.++. .++|+|+++||+++...-............+.++.+... +|++.++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 47999999998754322 22222211 389999999999974210000112223455666666544 8999999999
Q ss_pred ccCCCCCCCCcccCcccceeec---cccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCC
Q 046207 229 ELDYAPEIGENVPFKPYTHRYH---VPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETP 305 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~f~---~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 305 (458)
|.... ..+.+... +| ....++.++.+++..-... +...+..++++.+.++..
T Consensus 81 D~~~~---------~~~~~~~g~~~l~---------~~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~~r~~------ 135 (241)
T PRK05340 81 DFLLG---------KRFAKAAGMTLLP---------DPSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRKVRNP------ 135 (241)
T ss_pred chhhh---------HHHHHhCCCEEeC---------CcEEEEECCEEEEEECCcc-cccCCHHHHHHHHHHhCH------
Confidence 96321 01111110 11 1223555666555544321 111234444444444431
Q ss_pred eEEEEeccccccCCC---------------CCCcc-chHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 306 WLIVLLHSPWYNSNS---------------YHYME-GESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 306 ~~Iv~~H~P~~~~~~---------------~~~~~-~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
+...++|.+++.... ..... .....+.+.+++++++++++++||+|.-..
T Consensus 136 ~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 136 WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 122223333321100 00000 001124677888999999999999998654
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4e-10 Score=100.99 Aligned_cols=174 Identities=16% Similarity=0.128 Sum_probs=103.2
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccc--cCCCCCCCchhHHHHHHHHHHHHh-hccceEEccCCccc
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLS--YADDHPQHDNRRWDSWGRFVEKST-AYQAWIWVPGNHEL 230 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~--y~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~ 230 (458)
.+|+++++|+|........+..+.+..++|+++++||++ +-+. ...-..-.. ++.+. ..+|+++++||-|-
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~-----~~~~~~~~~-~e~l~~~~~~v~avpGNcD~ 76 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGP-----KEVAEELNK-LEALKELGIPVLAVPGNCDP 76 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCc-----hHHHHhhhH-HHHHHhcCCeEEEEcCCCCh
Confidence 589999999998866666666666655899999999999 4332 111111000 34444 47999999999884
Q ss_pred CCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc--C----CCChHH-HHHHHHHhccccCCC
Q 046207 231 DYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA--Y----GKYTPQ-YAWLEKELPKVNRAE 303 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~--~----~~~~~Q-~~WL~~~L~~~~~~~ 303 (458)
.. ........... .. + ...+.+++.|+++.-... + ...+++ +.-|++-+++++.
T Consensus 77 ~~---------v~~~l~~~~~~-----v~-~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~-- 137 (226)
T COG2129 77 PE---------VIDVLKNAGVN-----VH-G--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN-- 137 (226)
T ss_pred HH---------HHHHHHhcccc-----cc-c--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC--
Confidence 21 00111111100 00 1 456677777777432211 1 111222 2334444444321
Q ss_pred CCeEEEEeccccccCCCCCCcc-chHHHHHHHHHHHHcCccEEEecccccc
Q 046207 304 TPWLIVLLHSPWYNSNSYHYME-GESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 304 ~~~~Iv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
.-.|+++|+|++......... ...-.+.+..++++.++.+.+|||.|-+
T Consensus 138 -~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs 187 (226)
T COG2129 138 -PVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHES 187 (226)
T ss_pred -cceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccc
Confidence 112999999999875542111 1233568889999999999999999984
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-10 Score=102.36 Aligned_cols=58 Identities=28% Similarity=0.500 Sum_probs=38.5
Q ss_pred HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh-------hccceEEccCCcccC
Q 046207 172 TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST-------AYQAWIWVPGNHELD 231 (458)
Q Consensus 172 ~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~-------~~~P~~~v~GNHD~~ 231 (458)
.+..+++..+||+|+++||+++..... ....|....+.+..+. ..+|++.++||||+.
T Consensus 36 ~~~~~i~~~~pd~vi~lGDl~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 36 AFKTALQRLKPDVVLFLGDLFDGGRIA--DSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHhcCCCEEEEeccccCCcEeC--CHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 344555556999999999999876411 1234554443333332 268999999999974
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.6e-10 Score=113.37 Aligned_cols=177 Identities=16% Similarity=0.175 Sum_probs=109.1
Q ss_pred HHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHH---HHHHHHHHhhccceEEccCCcccCCCCCCC----Ccc--
Q 046207 171 QTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDS---WGRFVEKSTAYQAWIWVPGNHELDYAPEIG----ENV-- 240 (458)
Q Consensus 171 ~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~---~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~----~~~-- 240 (458)
.+|+++.+.. ++|+|+++||++-.+.+....+...+. ..+.+.....++|+|+++||||........ ...
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~ 278 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHS 278 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhh
Confidence 3566676665 499999999999887644333333333 334455556689999999999984322111 000
Q ss_pred ---cCccc---ceeeccccCC-CCCCCCceEEEE-cCeEEEEEecCCCcCC----------CChHHHHHHHHHhccccCC
Q 046207 241 ---PFKPY---THRYHVPYRA-SQSTSPLWYSIK-RASAYIIVLSSYSAYG----------KYTPQYAWLEKELPKVNRA 302 (458)
Q Consensus 241 ---~~~~~---~~~f~~P~~~-~~~~~~~~ys~~-~g~~~fi~Lds~~~~~----------~~~~Q~~WL~~~L~~~~~~ 302 (458)
-|... ...| +|... .....+.+|... +++.++|+||+..-+. ....|++|+..+|.+++..
T Consensus 279 ~~wly~~~~~~W~~w-lp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~ 357 (577)
T KOG3770|consen 279 QLWLYKHLAGAWSTW-LPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESA 357 (577)
T ss_pred hhHHHHHHHhhhhcc-CCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhc
Confidence 00111 1122 44322 222345677654 4889999999975422 2377899999999997643
Q ss_pred CCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcC--ccEEEeccccccc
Q 046207 303 ETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHK--VDLVVAGHVHSYE 354 (458)
Q Consensus 303 ~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--Vdlvl~GH~H~y~ 354 (458)
..-+=+++|.|+-.... .+.....+..++.++. +...|.||.|.-+
T Consensus 358 -GekVhil~HIPpG~~~c-----~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 358 -GEKVHILGHIPPGDGVC-----LEGWSINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred -CCEEEEEEeeCCCCcch-----hhhhhHHHHHHHHHHHHhhhhhccccCccee
Confidence 44578889999854211 1223345556666663 5567999999754
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.8e-10 Score=98.13 Aligned_cols=57 Identities=21% Similarity=0.229 Sum_probs=40.5
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
|++++||+|... ..+.++++.. ++|.|+++||+++... ... +....|++.|.||||.
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~----~~~-----------~~~~~~~~~V~GNhD~ 58 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGP----LNE-----------LELKAPVIAVRGNCDG 58 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCccccccc----cch-----------hhcCCcEEEEeCCCCC
Confidence 589999999663 4444444432 3999999999998654 111 2335789999999995
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.7e-10 Score=103.73 Aligned_cols=164 Identities=15% Similarity=0.153 Sum_probs=102.6
Q ss_pred EEEEEecCCCCCCcHHHHHHHH---hCCCCcEEEEcCccccCCCCC-----------------CCc----hhHHHHH--H
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYV---SNPKGQAVLFVGDLSYADDHP-----------------QHD----NRRWDSW--G 209 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~-----------------~~~----~~~~~~~--~ 209 (458)
||++.||.+...........+. ...+||++|++||.+|++... ... ...+..+ .
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5899999987766555555554 233999999999999998621 011 2222222 2
Q ss_pred HHHHHHhhccceEEccCCcccCCCCCCCC-------------cccCcccceeeccccCCCC--CCCCceEEEEcCeE-EE
Q 046207 210 RFVEKSTAYQAWIWVPGNHELDYAPEIGE-------------NVPFKPYTHRYHVPYRASQ--STSPLWYSIKRASA-YI 273 (458)
Q Consensus 210 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~~-------------~~~~~~~~~~f~~P~~~~~--~~~~~~ys~~~g~~-~f 273 (458)
..++.+.+.+|++.++.+||+..+..... ......|......+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 34566777899999999999964432210 0111233333332222221 23568999999996 99
Q ss_pred EEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCc--cEEEecccc
Q 046207 274 IVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKV--DLVVAGHVH 351 (458)
Q Consensus 274 i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~V--dlvl~GH~H 351 (458)
++||+.... ..| ......|+.+..++.+.++ -++|+|++|
T Consensus 161 ~~lD~R~~R------------------------------------d~W--~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR------------------------------------DSW--DGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc------------------------------------ccc--cccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998653 122 2235567777777655543 388999999
Q ss_pred cccccc
Q 046207 352 SYERTN 357 (458)
Q Consensus 352 ~y~r~~ 357 (458)
..+...
T Consensus 203 ~~~~~~ 208 (228)
T cd07389 203 LAEASD 208 (228)
T ss_pred HHHHhh
Confidence 766543
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.2e-10 Score=98.36 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=36.0
Q ss_pred HHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh---ccceEEccCCccc
Q 046207 175 HYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA---YQAWIWVPGNHEL 230 (458)
Q Consensus 175 ~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~---~~P~~~v~GNHD~ 230 (458)
++++..+||+|+++||+++..... ....|..+...+..+.. ..|++.++||||.
T Consensus 32 ~~i~~~~pd~vv~~GDl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~ 88 (156)
T cd08165 32 TSLWLLQPDVVFVLGDLFDEGKWS--TDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDI 88 (156)
T ss_pred HHHHhcCCCEEEECCCCCCCCccC--CHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCc
Confidence 444455999999999999865411 23445544433333322 4799999999996
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.4e-08 Score=88.25 Aligned_cols=167 Identities=18% Similarity=0.205 Sum_probs=96.2
Q ss_pred EEEEEecCCCCCCc---HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 156 IFGIIGDLGQTYDS---NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 156 ~f~~~gD~~~~~~~---~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
+++++||+|.+... ...+.++++..++|.|+|+||+++. .. .+.++.+ ..|++.|.||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~--------~~----~~~l~~~--~~~~~~V~GN~D~~~ 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK--------ET----YDYLKTI--APDVHIVRGDFDENL 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH--------HH----HHHHHhh--CCceEEEECCCCccc
Confidence 47899999955432 2234555554479999999999752 12 2233333 247999999999410
Q ss_pred CCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEec
Q 046207 233 APEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLH 312 (458)
Q Consensus 233 ~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H 312 (458)
.+|. ...++++ .++|.++|
T Consensus 67 -----------------~lp~---------~~~~~~~-----------------------------------g~~i~l~H 85 (178)
T cd07394 67 -----------------NYPE---------TKVITVG-----------------------------------QFKIGLIH 85 (178)
T ss_pred -----------------cCCC---------cEEEEEC-----------------------------------CEEEEEEE
Confidence 1221 1112222 13566666
Q ss_pred cccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCC
Q 046207 313 SPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIE 392 (458)
Q Consensus 313 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~ 392 (458)
--.+.... ..+.+..++++.++|++++||+|...... .++..++..|+.|.+.
T Consensus 86 G~~~~~~~--------~~~~~~~~~~~~~~dvii~GHTH~p~~~~-------------------~~g~~viNPGSv~~~~ 138 (178)
T cd07394 86 GHQVVPWG--------DPDSLAALQRQLDVDILISGHTHKFEAFE-------------------HEGKFFINPGSATGAF 138 (178)
T ss_pred CCcCCCCC--------CHHHHHHHHHhcCCCEEEECCCCcceEEE-------------------ECCEEEEECCCCCCCC
Confidence 43221100 11244556677889999999999754321 2456778888877543
Q ss_pred CCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCc
Q 046207 393 GLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNE 437 (458)
Q Consensus 393 ~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~ 437 (458)
.. .. . .....|+.|++.++ .+.+++++-.+++
T Consensus 139 ~~-~~---~--------~~~~syail~~~~~-~~~~~~~~l~~~~ 170 (178)
T cd07394 139 SP-LD---P--------NVIPSFVLMDIQGS-KVVTYVYQLIDGE 170 (178)
T ss_pred CC-CC---C--------CCCCeEEEEEecCC-eEEEEEEEEECCc
Confidence 21 00 0 01136888998554 4677877654554
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.8e-09 Score=92.77 Aligned_cols=62 Identities=18% Similarity=0.071 Sum_probs=42.9
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+|++++||+|......+.+.++.+.. ++|.|+++||++. . ...+.++.+ ..|++.|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~--------~----~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS--------P----FVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC--------H----HHHHHHHHh--CCceEEEccCCCc
Confidence 58999999997654444444555554 8999999999982 1 122333332 3589999999994
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.6e-08 Score=97.28 Aligned_cols=44 Identities=23% Similarity=0.206 Sum_probs=31.7
Q ss_pred CCeEEEEEecCCCCCC---------cHHHHHHHH---hCCCCcEEEEcCccccCCC
Q 046207 153 VPYIFGIIGDLGQTYD---------SNQTFEHYV---SNPKGQAVLFVGDLSYADD 196 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~---------~~~~l~~~~---~~~~pd~vl~~GDl~y~~~ 196 (458)
..+||++++|+|.+.. ...++++++ ...++|+||++||+.+...
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~ 57 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENK 57 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCC
Confidence 4699999999998732 123334332 2339999999999998865
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.4e-08 Score=88.85 Aligned_cols=73 Identities=11% Similarity=0.091 Sum_probs=44.0
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchh--HHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNR--RWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~--~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+|++++||+|......+.+.+.++..++|.|+++||+++.+.. ..... ..+...+.++.+ ..+++.+.||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~-~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPR-NPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcC-CCCccccCHHHHHHHHHhc--CCceEEEccCCcc
Confidence 5899999999653322333333333489999999999975431 00000 112233333332 3589999999995
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.9e-08 Score=94.03 Aligned_cols=74 Identities=16% Similarity=0.124 Sum_probs=46.6
Q ss_pred EEEecCCCCCCcH----HHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-ccceEEccCCcccC
Q 046207 158 GIIGDLGQTYDSN----QTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQAWIWVPGNHELD 231 (458)
Q Consensus 158 ~~~gD~~~~~~~~----~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 231 (458)
+++||+|.+.... ..++.+.+. .+||+|+++||+++.-.-........+.+.+.++.+.. ..|+++++||||..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 6899999875422 233444432 17999999999997421000011222445556666654 48999999999963
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.1e-09 Score=93.50 Aligned_cols=59 Identities=22% Similarity=0.321 Sum_probs=37.6
Q ss_pred HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHH-HHHHHHHh-------------------hccceEEccCCccc
Q 046207 171 QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSW-GRFVEKST-------------------AYQAWIWVPGNHEL 230 (458)
Q Consensus 171 ~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~l~-------------------~~~P~~~v~GNHD~ 230 (458)
.....+....+||.|+++|||++.. +. .+++|... .++.+.+. ..+|++.++||||+
T Consensus 34 ~~~~~~~~~l~Pd~V~fLGDLfd~~-w~--~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 34 HIVSMMQFWLKPDAVVVLGDLFSSQ-WI--DDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred HHHHHHHHhcCCCEEEEeccccCCC-cc--cHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 3445555556999999999999764 33 23445432 22222221 13799999999998
Q ss_pred CC
Q 046207 231 DY 232 (458)
Q Consensus 231 ~~ 232 (458)
.+
T Consensus 111 G~ 112 (193)
T cd08164 111 GY 112 (193)
T ss_pred CC
Confidence 54
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.5e-09 Score=87.51 Aligned_cols=50 Identities=20% Similarity=0.145 Sum_probs=33.3
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+|+++|+|++....... ....-.+.+.+++.+++++++|+||+|......
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 57888988864332110 011224577788889999999999999765543
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-08 Score=97.02 Aligned_cols=174 Identities=13% Similarity=0.094 Sum_probs=88.6
Q ss_pred eEEEEEecCCCCC------CcHH----HHHHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEE
Q 046207 155 YIFGIIGDLGQTY------DSNQ----TFEHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIW 223 (458)
Q Consensus 155 ~~f~~~gD~~~~~------~~~~----~l~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 223 (458)
++|+.++|+|... .... .++++.++ ++| +++.+||++....... ........+.+..+ -.-+.
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~-~~~~l~v~~GD~~~~~~~~~--~~~~~~~~~~l~~~---g~d~~ 74 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAE-NENTLLLDAGDNFDGSPPST--ATKGEANIELMNAL---GYDAV 74 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhc-CCCeEEEeCCccCCCccchh--ccCCcHHHHHHHhc---CCCEE
Confidence 5899999999543 2233 34444444 677 7899999997655211 01111223333332 34567
Q ss_pred ccCCcccCCCCCCCCcccCcccceeeccc-------cCC---CCCCCCceEEEEcCe--EEEEEecCCCcCC--------
Q 046207 224 VPGNHELDYAPEIGENVPFKPYTHRYHVP-------YRA---SQSTSPLWYSIKRAS--AYIIVLSSYSAYG-------- 283 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P-------~~~---~~~~~~~~ys~~~g~--~~fi~Lds~~~~~-------- 283 (458)
++||||+..... .+.........| ..+ .......|..++.++ +-|+++.+.....
T Consensus 75 ~~GNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 75 TIGNHEFDYGLD-----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred eeccccccccHH-----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 889999853221 111111111111 000 001112355667776 4556665432200
Q ss_pred --CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEecccccccc
Q 046207 284 --KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYER 355 (458)
Q Consensus 284 --~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~r 355 (458)
......+.+++..+. .+.+.+.+|++.|.+... . .. +.++ .+||++|+||.|..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~--------~----~~---la~~~~giDlvlggH~H~~~~ 208 (252)
T cd00845 150 GLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD--------D----EE---LAEEVPGIDVILGGHTHHLLE 208 (252)
T ss_pred CceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc--------h----HH---HHhcCCCccEEEcCCcCcccC
Confidence 001222333331222 225678899999987642 0 11 2222 5899999999998754
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.3e-08 Score=84.00 Aligned_cols=159 Identities=19% Similarity=0.200 Sum_probs=82.5
Q ss_pred HHHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCccccee
Q 046207 170 NQTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHR 248 (458)
Q Consensus 170 ~~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 248 (458)
++.-++..... .-|.|++.||++.+.... +-..=++++..+- ---+.+.||||+.+. +.. ...+.
T Consensus 31 ekI~k~W~~~v~~eDiVllpGDiSWaM~l~-----ea~~Dl~~i~~LP--G~K~m~rGNHDYWw~-s~s------kl~n~ 96 (230)
T COG1768 31 EKIKKHWRSKVSPEDIVLLPGDISWAMRLE-----EAEEDLRFIGDLP--GTKYMIRGNHDYWWS-SIS------KLNNA 96 (230)
T ss_pred HHHHHHHHhcCChhhEEEecccchhheech-----hhhhhhhhhhcCC--CcEEEEecCCccccc-hHH------HHHhh
Confidence 33444444333 458999999999886521 1111133444332 224679999998653 111 11111
Q ss_pred eccccCCCCCCCCceEEEEcCeEEEEEe---cCC-CcCCCChHH--------HHHHHHHhccccCCCCCeEEEEeccccc
Q 046207 249 YHVPYRASQSTSPLWYSIKRASAYIIVL---SSY-SAYGKYTPQ--------YAWLEKELPKVNRAETPWLIVLLHSPWY 316 (458)
Q Consensus 249 f~~P~~~~~~~~~~~ys~~~g~~~fi~L---ds~-~~~~~~~~Q--------~~WL~~~L~~~~~~~~~~~Iv~~H~P~~ 316 (458)
+|..- --..-.|.++++.+++. |+. .++....+| ..-|+..+.++-++.....||++|.|++
T Consensus 97 --lp~~l----~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~ 170 (230)
T COG1768 97 --LPPIL----FYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPF 170 (230)
T ss_pred --cCchH----hhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCC
Confidence 11000 00000133344333332 221 112122222 2333332222223455568999999999
Q ss_pred cCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 317 NSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
+...... .+.+++++++|+.++.||.|--.|-
T Consensus 171 s~~~t~~--------~~sevlee~rv~~~lyGHlHgv~~p 202 (230)
T COG1768 171 SDDGTPG--------PFSEVLEEGRVSKCLYGHLHGVPRP 202 (230)
T ss_pred CCCCCCc--------chHHHHhhcceeeEEeeeccCCCCC
Confidence 7654322 4567888999999999999998774
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.3e-08 Score=92.02 Aligned_cols=184 Identities=13% Similarity=0.064 Sum_probs=90.7
Q ss_pred eEEEEEecCCCCCC-------------cHHH----HHHHHhCCCCcEEEE-cCccccCCCCCCCc----hhHHHHHHHHH
Q 046207 155 YIFGIIGDLGQTYD-------------SNQT----FEHYVSNPKGQAVLF-VGDLSYADDHPQHD----NRRWDSWGRFV 212 (458)
Q Consensus 155 ~~f~~~gD~~~~~~-------------~~~~----l~~~~~~~~pd~vl~-~GDl~y~~~~~~~~----~~~~~~~~~~~ 212 (458)
++|+.++|+|.... .... ++++.+. +++.+++ +||++......... ........+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~-~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAE-NPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhc-CCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHH
Confidence 57888999885421 1122 3333333 6787776 99998754310000 00011223344
Q ss_pred HHHhhccceEEccCCcccCCCCCCCCcccCcccceeecccc-------CC-CCCCCCceEEEEcC-eEE--EEEecCCCc
Q 046207 213 EKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPY-------RA-SQSTSPLWYSIKRA-SAY--IIVLSSYSA 281 (458)
Q Consensus 213 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~-------~~-~~~~~~~~ys~~~g-~~~--fi~Lds~~~ 281 (458)
+.+ -+-+.++||||+..... .+.........|. .. .......|..++.+ +++ ||++-+...
T Consensus 80 n~~---g~d~~~lGNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~ 151 (277)
T cd07410 80 NAL---GYDAGTLGNHEFNYGLD-----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQI 151 (277)
T ss_pred Hhc---CCCEEeecccCcccCHH-----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCccc
Confidence 433 23467889999864211 1111111111110 00 00112346667788 754 455543221
Q ss_pred --C-----------CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEe
Q 046207 282 --Y-----------GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVA 347 (458)
Q Consensus 282 --~-----------~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~ 347 (458)
+ ....+..++..++|++ .+.+.+|+++|.+....... ....+.....+.++ .+||++|+
T Consensus 152 ~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~----~~~~~~~~~~la~~~~~vD~Ilg 224 (277)
T cd07410 152 PNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEE----SLTGENAAYELAEEVPGIDAILT 224 (277)
T ss_pred ccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccc----ccCCccHHHHHHhcCCCCcEEEe
Confidence 0 0112234444455554 56788999999987543210 01111222344444 58999999
Q ss_pred ccccccc
Q 046207 348 GHVHSYE 354 (458)
Q Consensus 348 GH~H~y~ 354 (458)
||.|...
T Consensus 225 GHsH~~~ 231 (277)
T cd07410 225 GHQHRRF 231 (277)
T ss_pred CCCcccc
Confidence 9999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.7e-08 Score=92.05 Aligned_cols=181 Identities=12% Similarity=0.067 Sum_probs=87.7
Q ss_pred EEEecCCCCCCcHH---HHHHHHhC---CCCcEEEEcCccccCCCCCCCc-hhHHHH-HHHHHHHHhhccceEEccCCcc
Q 046207 158 GIIGDLGQTYDSNQ---TFEHYVSN---PKGQAVLFVGDLSYADDHPQHD-NRRWDS-WGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 158 ~~~gD~~~~~~~~~---~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~-~~~~~~-~~~~~~~l~~~~P~~~v~GNHD 229 (458)
+++||+|.+..... .+..+.+. .++|.++++||+++.-...... ...... +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 47999998754322 22333222 3899999999999752211101 111111 2344444556789999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEE
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIV 309 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv 309 (458)
.... . .+........ .......+.+++.+++++-.... ........|+...+.... ..+.++
T Consensus 81 ~~~~-------~--~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~~-d~~~~~~~~~~~~~~~~~---~~~~~~ 142 (217)
T cd07398 81 FLLG-------D--FFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQF-DTDDRAYQLLRRLGRNPY---DQLLFL 142 (217)
T ss_pred HHHH-------h--HHHHHcCCEE-----eccceEEEeeCCeEEEEECCCcC-chhHHHHHHHHHHhCcHH---HHHHHh
Confidence 7421 0 0100000000 01112145667777777665432 233344444444332210 000000
Q ss_pred Eecccc---------cc----CCCCCC--ccchHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 310 LLHSPW---------YN----SNSYHY--MEGESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 310 ~~H~P~---------~~----~~~~~~--~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
..+... .. ...... .......+.+..++.+++++++++||+|.....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 143 NRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred cchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 000000 00 000000 011233456667778899999999999987553
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.74 E-value=9.7e-08 Score=90.75 Aligned_cols=174 Identities=16% Similarity=0.182 Sum_probs=88.3
Q ss_pred eEEEEEecCCCCCC-------cHHHH----HHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceE
Q 046207 155 YIFGIIGDLGQTYD-------SNQTF----EHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWI 222 (458)
Q Consensus 155 ~~f~~~gD~~~~~~-------~~~~l----~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 222 (458)
++|+.+.|+|.-.. ....+ +++.+. +++ ++|.+||++...... ...+.+...+.++.+ ..-+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~-~~~~l~l~~GD~~~g~~~~--~~~~g~~~~~~l~~l---~~d~ 74 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE-NPNTLVLFSGDVLSPSLLS--TATKGKQMVPVLNAL---GVDL 74 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc-CCCEEEEECCCccCCccch--hhcCCccHHHHHHhc---CCcE
Confidence 47888888873111 12333 333334 677 999999998654311 001112233344433 2336
Q ss_pred EccCCcccCCCCCCCCcccCcccceeeccc---------cC-CCCCCCCceEEEEcCeE--EEEEecCCCcC------CC
Q 046207 223 WVPGNHELDYAPEIGENVPFKPYTHRYHVP---------YR-ASQSTSPLWYSIKRASA--YIIVLSSYSAY------GK 284 (458)
Q Consensus 223 ~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P---------~~-~~~~~~~~~ys~~~g~~--~fi~Lds~~~~------~~ 284 (458)
.++||||+..... .+........+| .. .....-+.|..++.+++ -||++.+.... ..
T Consensus 75 ~~~GNHefd~g~~-----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~ 149 (257)
T cd07406 75 ACFGNHEFDFGED-----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPE 149 (257)
T ss_pred EeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCC
Confidence 6899999854211 111111111111 00 00001245677788874 55666554211 00
Q ss_pred ---ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 285 ---YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 285 ---~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
...-.+.+++.+++..+.+.+.+|++.|.+... .. .+.++ .+||++|+||.|..+
T Consensus 150 ~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 150 YVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred cceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 122233344434333335678899999987521 11 23333 479999999999865
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.4e-07 Score=85.84 Aligned_cols=181 Identities=18% Similarity=0.164 Sum_probs=94.8
Q ss_pred EEEEecCCCCCCc-HHHHHHHHhC--CCCcEEEEcCccccCCCCCCCch---------hHHHHHHHHHHHHh-hccceEE
Q 046207 157 FGIIGDLGQTYDS-NQTFEHYVSN--PKGQAVLFVGDLSYADDHPQHDN---------RRWDSWGRFVEKST-AYQAWIW 223 (458)
Q Consensus 157 f~~~gD~~~~~~~-~~~l~~~~~~--~~pd~vl~~GDl~y~~~~~~~~~---------~~~~~~~~~~~~l~-~~~P~~~ 223 (458)
|++.||.|..... ...+..+.+. .++|++|++||+..... ..+. ..+..|.+.++... ..+|+++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~--~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRN--EADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCC--cchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 5899999864221 1123333322 27999999999954322 1111 12233434443332 3577899
Q ss_pred ccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCce-----EEEEcCeEEEEEecCCCc---CCC--------ChH
Q 046207 224 VPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLW-----YSIKRASAYIIVLSSYSA---YGK--------YTP 287 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~-----ys~~~g~~~fi~Lds~~~---~~~--------~~~ 287 (458)
|.||||-.. . +. .++..+ ....+.+ ..+++++++|..|..... +.. ...
T Consensus 79 i~GNHE~~~--------~---l~---~l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~ 143 (262)
T cd00844 79 IGGNHEASN--------Y---LW---ELPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSED 143 (262)
T ss_pred ECCCCCCHH--------H---HH---hhcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHH
Confidence 999999410 0 10 011100 0011222 235568899998876321 111 122
Q ss_pred HHHHHH-------HHhccccCCCCCeEEEEeccccccCCCCCCcc---------------chHHHHHHHHHHHHcCccEE
Q 046207 288 QYAWLE-------KELPKVNRAETPWLIVLLHSPWYNSNSYHYME---------------GESMRVAFESWFVQHKVDLV 345 (458)
Q Consensus 288 Q~~WL~-------~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~ll~~~~Vdlv 345 (458)
++..+. +.|... +.+--|+++|.|+..-....... ...-...+..++++.++..+
T Consensus 144 ~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryh 220 (262)
T cd00844 144 TKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYW 220 (262)
T ss_pred HHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEE
Confidence 332211 112221 11236999999997643211100 01123467789999999999
Q ss_pred Eeccccc-ccccc
Q 046207 346 VAGHVHS-YERTN 357 (458)
Q Consensus 346 l~GH~H~-y~r~~ 357 (458)
|+||.|. |++..
T Consensus 221 f~gH~H~~f~~~~ 233 (262)
T cd00844 221 FSAHLHVKFAALV 233 (262)
T ss_pred EEecCCcccceec
Confidence 9999998 56554
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.9e-07 Score=94.45 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=50.7
Q ss_pred eEEEEEecCCCCCC----------cHH----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-cc
Q 046207 155 YIFGIIGDLGQTYD----------SNQ----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQ 219 (458)
Q Consensus 155 ~~f~~~gD~~~~~~----------~~~----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~ 219 (458)
+||++++|+|.+.. ... .+..+.+. ++||||++||+.+....+ ...-..+.+.++.+.. ++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~-~vD~vliAGDlFd~~~Ps---~~a~~~~~~~l~~l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEE-KVDFVLIAGDLFDTNNPS---PRALKLFLEALRRLKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHc-cCCEEEEccccccCCCCC---HHHHHHHHHHHHHhccCCC
Confidence 58999999999821 112 23334444 999999999999986522 1222345566666643 79
Q ss_pred ceEEccCCcccC
Q 046207 220 AWIWVPGNHELD 231 (458)
Q Consensus 220 P~~~v~GNHD~~ 231 (458)
|++++.||||..
T Consensus 77 pv~~I~GNHD~~ 88 (390)
T COG0420 77 PVVVIAGNHDSP 88 (390)
T ss_pred cEEEecCCCCch
Confidence 999999999964
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.61 E-value=3e-07 Score=90.27 Aligned_cols=117 Identities=15% Similarity=0.210 Sum_probs=75.2
Q ss_pred CCCeEEEEEecCCCCCCc-----HH-------------HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHH
Q 046207 152 DVPYIFGIIGDLGQTYDS-----NQ-------------TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVE 213 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~-----~~-------------~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~ 213 (458)
+..+|+++++|.|.-.+. .. .........+||.++++||+.+++.+.+ +++|..-.+.++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~--~eEf~~~~~Rfk 123 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAG--DEEFKKRYERFK 123 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCC--hHHHHHHHHHHH
Confidence 578999999999865421 11 1111222239999999999999876443 456655433345
Q ss_pred HHh---hccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc
Q 046207 214 KST---AYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA 281 (458)
Q Consensus 214 ~l~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~ 281 (458)
++. ..+|.+.++||||+++.... ...+..||.- ..++....|+.|+..|+++|++..
T Consensus 124 kIf~~k~~~~~~~i~GNhDIGf~~~~-----~~~~i~Rfe~------~fg~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 124 KIFGRKGNIKVIYIAGNHDIGFGNEL-----IPEWIDRFES------VFGPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred HhhCCCCCCeeEEeCCcccccccccc-----chhHHHHHHH------hhcchhhhhccCCceeEEeeehhh
Confidence 443 36899999999999754321 1223334420 012356678999999999998754
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=8.7e-07 Score=84.25 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=88.7
Q ss_pred eEEEEEecCCCCCC-------cHHHH----HHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEE
Q 046207 155 YIFGIIGDLGQTYD-------SNQTF----EHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIW 223 (458)
Q Consensus 155 ~~f~~~gD~~~~~~-------~~~~l----~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 223 (458)
++|+.++|+|.... ....+ +++.+. +.+++|.+||++...... .........+.+..+ ..- +.
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~ln~~--g~d-~~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-DNDLLVDAGDAIQGLPIS--DLDKGETIIKIMNAV--GYD-AV 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-CCEEEEeCCCcCCCchhh--hhcCCcHHHHHHHhc--CCc-EE
Confidence 47899999996421 12233 333333 578999999998753310 011111222333322 233 45
Q ss_pred ccCCcccCCCCCCCCcccCcccceeeccccCCC-------CC-CCCceEEEEcC-e--EEEEEecCCCc-C---CC---C
Q 046207 224 VPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS-------QS-TSPLWYSIKRA-S--AYIIVLSSYSA-Y---GK---Y 285 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-------~~-~~~~~ys~~~g-~--~~fi~Lds~~~-~---~~---~ 285 (458)
++||||++... ..+......+.+|.-.. +. .-..|.-++.+ + +-||++-+... . .. +
T Consensus 75 ~~GNHefd~G~-----~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 75 TPGNHEFDYGL-----DRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred ccccccccCCH-----HHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 78999986421 11122222222221100 00 01224455666 5 56676665321 0 00 0
Q ss_pred ---hHHHHHHHHH-hccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEecccccccc
Q 046207 286 ---TPQYAWLEKE-LPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYER 355 (458)
Q Consensus 286 ---~~Q~~WL~~~-L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~r 355 (458)
..-.+-+++. ....++.+.+.+|++.|.+....... . ... .+.++ .+||++|.||.|....
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~----~--~~~---~la~~~~giDvIigGH~H~~~~ 215 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP----W--TST---ELAANVTGIDLIIDGHSHTTIE 215 (257)
T ss_pred cEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC----c--cHH---HHHHhCCCceEEEeCCCccccc
Confidence 1112223333 22222256888999999887543211 0 011 22223 4799999999998654
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.6e-06 Score=74.26 Aligned_cols=63 Identities=17% Similarity=0.018 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++|+++||+|..........++....++|+|||+||.+.... ... +... -..++++|.||.|.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~-----~~~---l~~~-----~~~~i~~V~GN~D~ 64 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT-----LDA---LEGG-----LAAKLIAVRGNCDG 64 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc-----hHH---hhcc-----cccceEEEEccCCC
Confidence 689999999987532222333333339999999999998654 111 1111 13689999999996
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.2e-06 Score=84.71 Aligned_cols=64 Identities=17% Similarity=0.182 Sum_probs=36.4
Q ss_pred HHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH--cCccEEEecccccccc
Q 046207 290 AWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ--HKVDLVVAGHVHSYER 355 (458)
Q Consensus 290 ~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~--~~Vdlvl~GH~H~y~r 355 (458)
+-+++.+++++..+.+.+|++.|........... .+.......+++.+ .++|++|+||.|....
T Consensus 178 e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 178 EAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCcccc
Confidence 3444444444335688899999988653222110 01111122334444 3799999999998754
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.7e-06 Score=81.27 Aligned_cols=148 Identities=14% Similarity=0.114 Sum_probs=73.0
Q ss_pred CCcEE-EEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccC-----
Q 046207 181 KGQAV-LFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR----- 254 (458)
Q Consensus 181 ~pd~v-l~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----- 254 (458)
++|.+ +.+||++...... .........+.++. .++.++.||||+..... .+....+.+.+|.-
T Consensus 50 ~~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~l~~----~g~da~~GNHefd~g~~-----~l~~~~~~~~~~~l~aN~~ 118 (264)
T cd07411 50 NPNTLLLDGGDTWQGSGEA--LYTRGQAMVDALNA----LGVDAMVGHWEFTYGPE-----RVRELFGRLNWPFLAANVY 118 (264)
T ss_pred CCCeEEEeCCCccCCChHH--hhcCChhHHHHHHh----hCCeEEecccccccCHH-----HHHHHHhhCCCCEEEEEEE
Confidence 67876 5799999765310 00111222333333 45555449999864211 11111112222210
Q ss_pred --CCC-CCCCceEEEEcCe--EEEEEecCCCcCC-------C---ChHHHHHHHHHhcccc-CCCCCeEEEEeccccccC
Q 046207 255 --ASQ-STSPLWYSIKRAS--AYIIVLSSYSAYG-------K---YTPQYAWLEKELPKVN-RAETPWLIVLLHSPWYNS 318 (458)
Q Consensus 255 --~~~-~~~~~~ys~~~g~--~~fi~Lds~~~~~-------~---~~~Q~~WL~~~L~~~~-~~~~~~~Iv~~H~P~~~~ 318 (458)
..+ ..-..|..++.++ +-||++.+..... . .....+.+++.+.+.. +.+.+.+|++.|.+...
T Consensus 119 ~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~- 197 (264)
T cd07411 119 DDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV- 197 (264)
T ss_pred eCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh-
Confidence 000 0112355567776 5567776532100 0 1223444544433321 25678899999987531
Q ss_pred CCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 319 NSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 319 ~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
.. .+.++ .+||++|+||.|...
T Consensus 198 -------~~-------~la~~~~~iDlilgGH~H~~~ 220 (264)
T cd07411 198 -------DV-------ELAERVPGIDVILSGHTHERT 220 (264)
T ss_pred -------hH-------HHHhcCCCCcEEEeCcccccc
Confidence 11 12233 479999999999753
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-05 Score=76.71 Aligned_cols=184 Identities=13% Similarity=0.123 Sum_probs=92.2
Q ss_pred CCeEEEEEecCCCCCCc--------------HHHHHHHH---hCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHH
Q 046207 153 VPYIFGIIGDLGQTYDS--------------NQTFEHYV---SNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEK 214 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~--------------~~~l~~~~---~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 214 (458)
..++|+..+|+|..... ...++++. +..+++ ++|..||.+....+.......+....++++.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~ 83 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRM 83 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHh
Confidence 46999999999954210 11223222 222455 6778999997654221111123333444444
Q ss_pred Hhhccce-EEccCCcccCCCCCCCCcccCcccceeecccc--------CCC-C--CCCCceEEEEcC-e--EEEEEecCC
Q 046207 215 STAYQAW-IWVPGNHELDYAPEIGENVPFKPYTHRYHVPY--------RAS-Q--STSPLWYSIKRA-S--AYIIVLSSY 279 (458)
Q Consensus 215 l~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~--------~~~-~--~~~~~~ys~~~g-~--~~fi~Lds~ 279 (458)
+ ++ ++++||||++.... + ...+..+......|. .+. . .....|..++.+ + +-+|++-+.
T Consensus 84 m----gyDa~tlGNHEFd~g~~-~-l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~ 157 (282)
T cd07407 84 M----PYDLLTIGNHELYNYEV-A-DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFD 157 (282)
T ss_pred c----CCcEEeecccccCcccc-H-HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEecc
Confidence 3 33 67999999953211 0 000000111111110 000 0 011235556665 5 456666543
Q ss_pred Cc-------CCCC--hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-Ccc-EEEec
Q 046207 280 SA-------YGKY--TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVD-LVVAG 348 (458)
Q Consensus 280 ~~-------~~~~--~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vd-lvl~G 348 (458)
.. +... ..+.+|+.+.|++ .+.+.+|++.|....... ...+....+.++. ++| ++|.|
T Consensus 158 ~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii~G 226 (282)
T cd07407 158 FKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFLGG 226 (282)
T ss_pred cccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEEeC
Confidence 21 1111 2233488777874 467889999998874321 1111122334444 567 79999
Q ss_pred ccccc
Q 046207 349 HVHSY 353 (458)
Q Consensus 349 H~H~y 353 (458)
|+|..
T Consensus 227 HsH~~ 231 (282)
T cd07407 227 HSHVR 231 (282)
T ss_pred Ccccc
Confidence 99975
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.8e-05 Score=76.31 Aligned_cols=189 Identities=14% Similarity=0.081 Sum_probs=86.7
Q ss_pred eEEEEEecCCCCCCc-------H----HHHHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhcc
Q 046207 155 YIFGIIGDLGQTYDS-------N----QTFEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQ 219 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-------~----~~l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~ 219 (458)
++|+..+|+|..... . ..++++.++ ...-++|.+||++..... + ...+.....+.++.+ ..
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-~-~~~~g~~~~~~~n~~--g~ 76 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-S-DLQDAEPDFRGMNLV--GY 76 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-H-HhcCcchHHHHHHhh--CC
Confidence 478899999864211 1 223333321 134589999998854321 0 001111122333333 12
Q ss_pred ceEEccCCcccCCCCCCCCcccCcccce--eeccccC-----CCCCCCCceEEEEcCeEE--EEEecCCCc-C--C----
Q 046207 220 AWIWVPGNHELDYAPEIGENVPFKPYTH--RYHVPYR-----ASQSTSPLWYSIKRASAY--IIVLSSYSA-Y--G---- 283 (458)
Q Consensus 220 P~~~v~GNHD~~~~~~~~~~~~~~~~~~--~f~~P~~-----~~~~~~~~~ys~~~g~~~--fi~Lds~~~-~--~---- 283 (458)
=..++||||+++... .+..... .|++... .....-..|..++.++++ ||++-+... . .
T Consensus 77 -Da~~~GNHEfD~G~~-----~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~ 150 (285)
T cd07405 77 -DAMAVGNHEFDNPLE-----VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYF 150 (285)
T ss_pred -cEEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCc
Confidence 245789999865321 1111111 1111100 000111235566777754 555544221 0 0
Q ss_pred CC---hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 284 KY---TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 284 ~~---~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+ ....+=+++.+++.+..+.+.+|++.|........ .. ........+.+.+...++|++|.||.|....
T Consensus 151 ~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~-~~-~~~~~~~~lA~~~~~~giD~IigGHsH~~~~ 223 (285)
T cd07405 151 EGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGE-HG-SNAPGDVEMARALPAGGLDLIVGGHSQDPVC 223 (285)
T ss_pred CCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCcc-cc-ccCchHHHHHHhcCCCCCCEEEeCCCCcccc
Confidence 00 11222222222222224678899999998753221 10 0101111222222235899999999998653
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.4e-06 Score=77.55 Aligned_cols=170 Identities=15% Similarity=0.142 Sum_probs=88.3
Q ss_pred EEEEEecCCCCCCcH----HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccC
Q 046207 156 IFGIIGDLGQTYDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~----~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 231 (458)
||+++||. .+.... ..+.++.++.++|+++..||++-.+. .. . ....+.+..+ .+- +.+.|||+++
T Consensus 1 ~ilfigdi-~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~-gl-~----~~~~~~L~~~--G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDI-VGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGK-GI-T----PKIAKELLSA--GVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeC-CCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCC-CC-C----HHHHHHHHhc--CCC-EEEecccccC
Confidence 58899998 433223 33445555558999999999987652 11 1 1222333322 233 4567999986
Q ss_pred CCCCCCCcccCcccceee---ccccCCC-CCCCCceEEEEcCeEEE--EEecCCCcCCCChHHHHHHHHHhccccCCCCC
Q 046207 232 YAPEIGENVPFKPYTHRY---HVPYRAS-QSTSPLWYSIKRASAYI--IVLSSYSAYGKYTPQYAWLEKELPKVNRAETP 305 (458)
Q Consensus 232 ~~~~~~~~~~~~~~~~~f---~~P~~~~-~~~~~~~ys~~~g~~~f--i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 305 (458)
.. . ...+.+.. -.|.+-+ ......|..++.++.++ +.|-..........-++-+++.+++.+. +.+
T Consensus 71 ~g-e------l~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D 142 (255)
T cd07382 71 KK-E------ILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EAD 142 (255)
T ss_pred cc-h------HHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCC
Confidence 43 1 11111111 1111111 11133467777777554 4443222211122223445555655443 577
Q ss_pred eEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 306 WLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 306 ~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+||.+|.-..+ + ...+.. .-..+||+++.||+|...-
T Consensus 143 ~IIV~~H~g~ts---------E--k~ala~-~ldg~VdvIvGtHTHv~t~ 180 (255)
T cd07382 143 IIFVDFHAEATS---------E--KIALGW-YLDGRVSAVVGTHTHVQTA 180 (255)
T ss_pred EEEEEECCCCCH---------H--HHHHHH-hCCCCceEEEeCCCCccCC
Confidence 899999984311 1 112221 1233699999999998643
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.40 E-value=4e-06 Score=95.80 Aligned_cols=191 Identities=15% Similarity=0.134 Sum_probs=94.5
Q ss_pred CCCCeEEEEEecCCCCCCcHHH----HHHHHhCCCCcEEEE-cCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEcc
Q 046207 151 PDVPYIFGIIGDLGQTYDSNQT----FEHYVSNPKGQAVLF-VGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVP 225 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~~~~----l~~~~~~~~pd~vl~-~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 225 (458)
....++|++++|+|........ ++++.+. +|+.+++ +||++...... .........+.+..+ -.-+.++
T Consensus 657 ~~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~-~~~~l~ld~GD~~~gs~~~--~~~~g~~~~~~ln~l---g~d~~~~ 730 (1163)
T PRK09419 657 DNWELTILHTNDFHGHLDGAAKRVTKIKEVKEE-NPNTILVDAGDVYQGSLYS--NLLKGLPVLKMMKEM---GYDASTF 730 (1163)
T ss_pred CceEEEEEEEeecccCCCCHHHHHHHHHHHHhh-CCCeEEEecCCCCCCcchh--hhcCChHHHHHHhCc---CCCEEEe
Confidence 3356999999999955333333 3344444 7887766 99998654310 011112223333332 2346699
Q ss_pred CCcccCCCCCC-----CCcc------c-----CcccceeeccccCCC-CCCCCceEEEEcCe--EEEEEecCCCc-C---
Q 046207 226 GNHELDYAPEI-----GENV------P-----FKPYTHRYHVPYRAS-QSTSPLWYSIKRAS--AYIIVLSSYSA-Y--- 282 (458)
Q Consensus 226 GNHD~~~~~~~-----~~~~------~-----~~~~~~~f~~P~~~~-~~~~~~~ys~~~g~--~~fi~Lds~~~-~--- 282 (458)
||||++..... .... . |............+. ...-..|.-++.++ +-||++-+... .
T Consensus 731 GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~ 810 (1163)
T PRK09419 731 GNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTS 810 (1163)
T ss_pred cccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccC
Confidence 99998643210 0000 0 100000000000000 00112455667777 55676654321 0
Q ss_pred -C--C---ChHHHHHHHHHhcccc-CCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEeccccccc
Q 046207 283 -G--K---YTPQYAWLEKELPKVN-RAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYE 354 (458)
Q Consensus 283 -~--~---~~~Q~~WL~~~L~~~~-~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~ 354 (458)
. . .....+.+++..++.+ ..+.+.+|++.|......... .+ ....++.++. +||++|.||+|..-
T Consensus 811 p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 811 PGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHHHhCCCCCEEEeCCCCccc
Confidence 0 0 1122333444333332 256888999999987532111 11 1223444443 79999999999764
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.33 E-value=2e-06 Score=78.23 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=43.4
Q ss_pred EEecCCCCCCcH---HHHHHHHhCC--CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh-hccceEEccCCccc
Q 046207 159 IIGDLGQTYDSN---QTFEHYVSNP--KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST-AYQAWIWVPGNHEL 230 (458)
Q Consensus 159 ~~gD~~~~~~~~---~~l~~~~~~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~ 230 (458)
+|||+|.+.... ..+...++.. +.|.+.++||+++.-.......+.-++....+..+. +..|+|.++||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHH
Confidence 689999984322 2334445443 559999999999863311111112222233333333 46899999999996
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.1e-06 Score=80.69 Aligned_cols=155 Identities=17% Similarity=0.161 Sum_probs=77.9
Q ss_pred HHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccc
Q 046207 174 EHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVP 252 (458)
Q Consensus 174 ~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P 252 (458)
+++.+. +++ ++|.+||++....... ..+.+...+.++.+ ... +.++||||+++..+ .+....+...+|
T Consensus 42 ~~~r~~-~~~~l~ld~GD~~~gs~~~~--~~~g~~~~~~ln~~--g~D-~~~lGNHefd~G~~-----~l~~~~~~~~~p 110 (281)
T cd07409 42 KELRAE-NPNVLFLNAGDAFQGTLWYT--LYKGNADAEFMNLL--GYD-AMTLGNHEFDDGVE-----GLAPFLNNLKFP 110 (281)
T ss_pred HHHHhc-CCCEEEEeCCCCCCCcchhh--hcCChHHHHHHHhc--CCC-EEEeccccccCCHH-----HHHHHHHhCCCC
Confidence 334333 566 5666999987643111 11112223334332 233 55789999865321 111111111122
Q ss_pred cCC------C-----CCCCCceEEEEcCe--EEEEEecCCCc--C-C--C---ChHHHHHHHHHhccccCCCCCeEEEEe
Q 046207 253 YRA------S-----QSTSPLWYSIKRAS--AYIIVLSSYSA--Y-G--K---YTPQYAWLEKELPKVNRAETPWLIVLL 311 (458)
Q Consensus 253 ~~~------~-----~~~~~~~ys~~~g~--~~fi~Lds~~~--~-~--~---~~~Q~~WL~~~L~~~~~~~~~~~Iv~~ 311 (458)
.-. . ...-..|..++.++ +-||++-+... . . . .....+.+++.+++++..+.+.+|++.
T Consensus 111 ~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~ 190 (281)
T cd07409 111 VLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALS 190 (281)
T ss_pred EEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 110 0 00112355667777 45566654321 0 0 1 123345566666555445688899999
Q ss_pred ccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 312 HSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 312 H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
|..... .. .+.++ .+||++|+||.|...
T Consensus 191 H~G~~~------------d~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 191 HSGYEV------------DK---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred ccCchh------------HH---HHHHcCCCCcEEEeCCcCccc
Confidence 986421 01 23333 479999999999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.1e-06 Score=85.17 Aligned_cols=80 Identities=16% Similarity=0.282 Sum_probs=51.8
Q ss_pred CCCeEEEEEecCCCCCCc--H---HHHHHHHh---------CCCCcEEEEcCccccCCC-CCCCc--------hhHHHHH
Q 046207 152 DVPYIFGIIGDLGQTYDS--N---QTFEHYVS---------NPKGQAVLFVGDLSYADD-HPQHD--------NRRWDSW 208 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~--~---~~l~~~~~---------~~~pd~vl~~GDl~y~~~-~~~~~--------~~~~~~~ 208 (458)
....+++++||+|.+... . ..+...+. ..+++.+|++||+++..+ ++.+. ...++.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 467899999999977532 1 12222222 227999999999997532 11111 1123345
Q ss_pred HHHHHHHhhccceEEccCCcccC
Q 046207 209 GRFVEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 209 ~~~~~~l~~~~P~~~v~GNHD~~ 231 (458)
.+.+..+...+|++.++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 56667776778999999999963
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.4e-05 Score=73.91 Aligned_cols=196 Identities=17% Similarity=0.104 Sum_probs=104.0
Q ss_pred eEEEEEecCCCCCCcH----HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~----~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+||+++||. .+.... ..+..+.++.++||++..||++-.+. .. .. ...+.+.. ..+-++ +.|||++
T Consensus 1 m~ilfiGDi-~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~-Gi-~~----~~~~~L~~--~GvDvi-T~GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDV-YGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGK-GL-TL----KIYEFLKQ--SGVNYI-TMGNHTW 70 (266)
T ss_pred CeEEEEEec-CCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCC-CC-CH----HHHHHHHh--cCCCEE-Eccchhc
Confidence 489999998 332223 33455555558999999999996542 11 11 11222222 245555 5599998
Q ss_pred CCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCC--CcCCC--ChHHHHHHHHHhccccCCCCCe
Q 046207 231 DYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSY--SAYGK--YTPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~--~~~~~--~~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
+...................+|.. ..+..|..+..++.++-+++-. ..... ...-++-+++.+++++ .+.+.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 643210000000011111122211 1233456667777665555432 11111 1112233444444432 24678
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEe-
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTI- 385 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~- 385 (458)
+||.+|.-.- . .+.....+-+.+|++|+.-|+|...--.++ -++|+.||+-
T Consensus 147 IIVd~Haeat-----------s-EK~a~~~~ldg~vsaVvGtHtHV~TaD~~i----------------l~~gtayitD~ 198 (266)
T TIGR00282 147 IFVDFHAETT-----------S-EKNAFGMAFDGYVTAVVGTHTHVPTADLRI----------------LPKGTAYITDV 198 (266)
T ss_pred EEEEeCCCCH-----------H-HHHHHHHHhCCCccEEEeCCCCCCCCccee----------------CCCCCEEEecC
Confidence 9999996431 1 234456777789999999999986443322 1678888874
Q ss_pred CCCCCCC
Q 046207 386 GDGGNIE 392 (458)
Q Consensus 386 G~gG~~~ 392 (458)
|.-|...
T Consensus 199 Gm~G~~~ 205 (266)
T TIGR00282 199 GMTGPFG 205 (266)
T ss_pred CcccCcc
Confidence 6666543
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.1e-06 Score=81.32 Aligned_cols=74 Identities=12% Similarity=0.132 Sum_probs=49.2
Q ss_pred eEEEEEecCCCCCCc---------HHHHHHH---HhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-c-cc
Q 046207 155 YIFGIIGDLGQTYDS---------NQTFEHY---VSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-Y-QA 220 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~---------~~~l~~~---~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~-~P 220 (458)
+||++++|+|.+... ...++++ +.+.++|+||++||+++.... .......+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p---~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANP---PAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCC---CHHHHHHHHHHHHHHHhcCCce
Confidence 589999999987421 1223332 223389999999999987641 11222335566666644 3 89
Q ss_pred eEEccCCcccC
Q 046207 221 WIWVPGNHELD 231 (458)
Q Consensus 221 ~~~v~GNHD~~ 231 (458)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999963
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.28 E-value=2e-06 Score=78.93 Aligned_cols=63 Identities=24% Similarity=0.224 Sum_probs=40.8
Q ss_pred EEEecCCCCCCcHHHHHHHHhC-----------CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHH-----hhccce
Q 046207 158 GIIGDLGQTYDSNQTFEHYVSN-----------PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS-----TAYQAW 221 (458)
Q Consensus 158 ~~~gD~~~~~~~~~~l~~~~~~-----------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l-----~~~~P~ 221 (458)
+++||+|.. ...+.++++. .+.|.++++||+++.+. +..+ ..+.+..+ ....++
T Consensus 1 ~vi~DIHG~---~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~----~~~~---vl~~l~~l~~~~~~~~~~v 70 (208)
T cd07425 1 VAIGDLHGD---LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGP----DVIE---ILWLLYKLEQEAAKAGGKV 70 (208)
T ss_pred CEEeCccCC---HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCc----CHHH---HHHHHHHHHHHHHhcCCeE
Confidence 379999876 3444444432 25799999999999775 2221 22222222 234689
Q ss_pred EEccCCccc
Q 046207 222 IWVPGNHEL 230 (458)
Q Consensus 222 ~~v~GNHD~ 230 (458)
+++.||||.
T Consensus 71 ~~l~GNHE~ 79 (208)
T cd07425 71 HFLLGNHEL 79 (208)
T ss_pred EEeeCCCcH
Confidence 999999996
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.1e-05 Score=84.70 Aligned_cols=188 Identities=15% Similarity=0.127 Sum_probs=101.8
Q ss_pred CCCCeEEEEEecCCCCCC------------cHHH----HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHH
Q 046207 151 PDVPYIFGIIGDLGQTYD------------SNQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK 214 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~------------~~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 214 (458)
....++|+..+|+|..-. .... ++++.++.+..++|.+||++......+. ........+.|..
T Consensus 23 ~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~~mN~ 101 (517)
T COG0737 23 ETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVDLLNA 101 (517)
T ss_pred CceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCChHHHHHhh
Confidence 457899999999996533 1222 2333344355789999999987553222 1222223444444
Q ss_pred HhhccceEEccCCcccCCCCCCCCcccCcccceeecccc-------C-C-CCCCCCceEEEEcCe--EEEEEecCCCc--
Q 046207 215 STAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPY-------R-A-SQSTSPLWYSIKRAS--AYIIVLSSYSA-- 281 (458)
Q Consensus 215 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~-------~-~-~~~~~~~~ys~~~g~--~~fi~Lds~~~-- 281 (458)
+. .=+.++||||+....+ .+..+......|. . . .....+.|.-++.++ +-+|++.+...
T Consensus 102 m~---yDa~tiGNHEFd~g~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 102 LG---YDAMTLGNHEFDYGLE-----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred cC---CcEEeecccccccCHH-----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 32 2267999999965321 1111222222220 0 0 011124577788887 55677765221
Q ss_pred CC--------CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccc
Q 046207 282 YG--------KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 282 ~~--------~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
+. ......+++++.+.+.+.++.+.+|++.|.+............ ....... .++|+++.||.|.+
T Consensus 174 ~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~-~~~~~~~-----~~iD~i~~GH~H~~ 247 (517)
T COG0737 174 WEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVP-GDVDVAV-----PGIDLIIGGHSHTV 247 (517)
T ss_pred cccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccc-ccccccc-----cCcceEeccCCccc
Confidence 11 1134455666666665444478899999999865432211100 0000000 44999999999965
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.6e-06 Score=75.56 Aligned_cols=40 Identities=18% Similarity=0.274 Sum_probs=28.3
Q ss_pred CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 181 KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 181 ~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++|.|+++||++.... . ..+ .+.++.+ ..|++.++||||.
T Consensus 42 ~~d~vi~~GDl~~~~~----~-~~~---~~~l~~~--~~~~~~v~GNHD~ 81 (168)
T cd07390 42 PDDTVYHLGDFSFGGK----A-GTE---LELLSRL--NGRKHLIKGNHDS 81 (168)
T ss_pred CCCEEEEeCCCCCCCC----h-HHH---HHHHHhC--CCCeEEEeCCCCc
Confidence 6899999999998754 2 221 2333332 3589999999995
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.8e-06 Score=84.82 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=47.2
Q ss_pred eEEEEEecCCCCCCc---------HHHHHH---HHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-ccce
Q 046207 155 YIFGIIGDLGQTYDS---------NQTFEH---YVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQAW 221 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~---------~~~l~~---~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~P~ 221 (458)
+||++++|+|.+... ...++. ++...+||+||++||+++.... .......+.+++..+.. .+|+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p---~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSP---PSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCC---cHHHHHHHHHHHHHHHhcCCcE
Confidence 589999999987321 111222 2233499999999999986541 11111223444455443 5899
Q ss_pred EEccCCcccC
Q 046207 222 IWVPGNHELD 231 (458)
Q Consensus 222 ~~v~GNHD~~ 231 (458)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999963
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.5e-05 Score=79.94 Aligned_cols=189 Identities=13% Similarity=0.093 Sum_probs=90.1
Q ss_pred CCCCeEEEEEecCCCCCC-------cHHH----HHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHH
Q 046207 151 PDVPYIFGIIGDLGQTYD-------SNQT----FEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS 215 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~-------~~~~----l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l 215 (458)
....++|+.++|+|.... .... ++++.+. ...-++|.+||++...... .........+.+..+
T Consensus 31 ~~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s--~~~~g~~~i~~mN~~ 108 (551)
T PRK09558 31 KTYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPES--DLQDAEPDFRGMNLI 108 (551)
T ss_pred CceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhh--hhcCCchhHHHHhcC
Confidence 346799999999997532 1222 2233211 1345899999988643210 000111122333332
Q ss_pred hhccceEEccCCcccCCCCCCCCcccCcccceeeccccC-------CCC-CCCCceEEEEcCe--EEEEEecCCCc--C-
Q 046207 216 TAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR-------ASQ-STSPLWYSIKRAS--AYIIVLSSYSA--Y- 282 (458)
Q Consensus 216 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~-------~~~-~~~~~~ys~~~g~--~~fi~Lds~~~--~- 282 (458)
. .=+.++||||+++... .+........+|.- ..+ ..-..|..++.++ +-||++-+... +
T Consensus 109 --g-~Da~tlGNHEFD~G~~-----~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 109 --G-YDAMAVGNHEFDNPLS-----VLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred --C-CCEEcccccccCcCHH-----HHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 1 2256789999975421 11111111111210 000 1113456667777 45566644321 0
Q ss_pred CC-------ChHHHHHHHHHhccccC-CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc---CccEEEecccc
Q 046207 283 GK-------YTPQYAWLEKELPKVNR-AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH---KVDLVVAGHVH 351 (458)
Q Consensus 283 ~~-------~~~Q~~WL~~~L~~~~~-~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~---~Vdlvl~GH~H 351 (458)
.. .....+-+++..++.+. .+.+.+|++.|......... .+..... ..+.++. +||++|.||.|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~--~~~~~~d---~~la~~~~~~~IDvIlgGHsH 255 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEH--GSNAPGD---VEMARSLPAGGLDMIVGGHSQ 255 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCcc--CCCCccH---HHHHHhCCccCceEEEeCCCC
Confidence 00 01112223333333321 46788999999987532211 0000001 2344443 79999999999
Q ss_pred ccc
Q 046207 352 SYE 354 (458)
Q Consensus 352 ~y~ 354 (458)
..-
T Consensus 256 ~~~ 258 (551)
T PRK09558 256 DPV 258 (551)
T ss_pred ccc
Confidence 753
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.1e-05 Score=79.90 Aligned_cols=75 Identities=12% Similarity=0.033 Sum_probs=47.0
Q ss_pred eEEEEEecCCCCCCc---------HHHHHHHH---hCCCCcEEEEcCccccCCCCCCCchhHHHHHHH-HHHHHh-hccc
Q 046207 155 YIFGIIGDLGQTYDS---------NQTFEHYV---SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGR-FVEKST-AYQA 220 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~---------~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~-~~~~l~-~~~P 220 (458)
+||+++||+|.+... ...+++++ .+.++|+||++||+++..... .........+ +++.+. ..+|
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~--~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAI--TQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCC--CHHHHHHHHHHHHHHHHHCCCe
Confidence 589999999987432 12333332 223999999999999864311 1122222222 244443 3689
Q ss_pred eEEccCCcccC
Q 046207 221 WIWVPGNHELD 231 (458)
Q Consensus 221 ~~~v~GNHD~~ 231 (458)
++.++||||..
T Consensus 79 v~~I~GNHD~~ 89 (340)
T PHA02546 79 LHVLVGNHDMY 89 (340)
T ss_pred EEEEccCCCcc
Confidence 99999999964
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.95 E-value=7.3e-05 Score=78.80 Aligned_cols=146 Identities=20% Similarity=0.160 Sum_probs=72.0
Q ss_pred CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccC------
Q 046207 181 KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR------ 254 (458)
Q Consensus 181 ~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~------ 254 (458)
..-++|.+||++....... ....+...+.+..+ --=+.++||||+++... .+..+.....+|.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~~--~~~g~~~i~~~N~~---g~Da~~lGNHEFd~G~~-----~l~~~~~~~~fp~l~aNv~~ 118 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFT--LFGGRADAALMNAA---GFDFFTLGNHEFDAGNE-----GLKEFLEPLEIPVLSANVIP 118 (550)
T ss_pred CCeEEEECCCCCCCccchh--hcCCHHHHHHHhcc---CCCEEEeccccccCCHH-----HHHHHHHhCCCCEEEEeeec
Confidence 3458899999986543110 01111122333322 22367999999865321 11111111112210
Q ss_pred --CCC--CCCCceEEEEcCe--EEEEEecCCCc-C---CCC-----hHHHHHHH---HHhccccCCCCCeEEEEeccccc
Q 046207 255 --ASQ--STSPLWYSIKRAS--AYIIVLSSYSA-Y---GKY-----TPQYAWLE---KELPKVNRAETPWLIVLLHSPWY 316 (458)
Q Consensus 255 --~~~--~~~~~~ys~~~g~--~~fi~Lds~~~-~---~~~-----~~Q~~WL~---~~L~~~~~~~~~~~Iv~~H~P~~ 316 (458)
... ..-..|..+++++ +-||+|.+... . ... ....+=++ ++|++ .+.+.+|++.|....
T Consensus 119 ~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II~lsH~g~~ 195 (550)
T TIGR01530 119 DAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKIILLSHAGFE 195 (550)
T ss_pred CCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEEEEecCCcH
Confidence 000 0113455667776 66788865221 0 000 11112122 33443 567889999997532
Q ss_pred cCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 317 NSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
. . ..+.++ .+||++|+||+|.+-
T Consensus 196 ~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 196 K--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred H--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 1 1 123333 279999999999864
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.4e-05 Score=67.54 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=38.9
Q ss_pred EEEecCCCCCC-cHHHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHH-HhhccceEEccCCcc
Q 046207 158 GIIGDLGQTYD-SNQTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK-STAYQAWIWVPGNHE 229 (458)
Q Consensus 158 ~~~gD~~~~~~-~~~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~-l~~~~P~~~v~GNHD 229 (458)
+++||.+...+ -...++.+.++ .+.|++|++||+.-... ... .|.+.+.. ....+|.|++-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~----~~~---~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDE----DDE---ELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCcc----chh---hHHHHhcCCccCCCCEEEECCCCC
Confidence 36888865421 12223333322 27999999999987654 222 33333332 234689999999996
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.4e-05 Score=72.92 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=26.5
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEeccccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYE 354 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~ 354 (458)
.+.+.+|++.|..-+. .+ ..+.++. +||++|.||+|.+-
T Consensus 206 ~gvD~II~LsH~g~~~---------~d-----~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS---------IE-----QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc---------hH-----HHHHhcCCCCCEEEeCCCCccC
Confidence 5678899999984211 11 1244443 79999999999864
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00038 Score=75.69 Aligned_cols=197 Identities=16% Similarity=0.082 Sum_probs=93.5
Q ss_pred ECCCCCCCCCCeEEEEEecCCCCCC-------------cHHH----HHHHHhCCCCcEEEEcCccccCCCCCCCch----
Q 046207 144 TTPPKVGPDVPYIFGIIGDLGQTYD-------------SNQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDN---- 202 (458)
Q Consensus 144 ~T~p~~~~~~~~~f~~~gD~~~~~~-------------~~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~---- 202 (458)
.+.|..+....++|+..+|+|.... .... ++++.+...--++|..||++....+.+...
T Consensus 105 ~~~~~~~~~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~ 184 (814)
T PRK11907 105 TSKPVEGQTVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDP 184 (814)
T ss_pred cCCCccCCceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccc
Confidence 3445544556899999999996521 0112 233333312348999999998754211100
Q ss_pred -hHHH--HHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCC-------CC-CCCCceEEEEc---
Q 046207 203 -RRWD--SWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRA-------SQ-STSPLWYSIKR--- 268 (458)
Q Consensus 203 -~~~~--~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~~-~~~~~~ys~~~--- 268 (458)
...+ -..+.|..+. -=..++||||+++..+ .+..+.....+|.-. .+ ..-..|--++.
T Consensus 185 ~~~g~~~P~i~amN~LG---yDA~tLGNHEFDyG~d-----~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~ 256 (814)
T PRK11907 185 VEEGEQHPMYAALEALG---FDAGTLGNHEFNYGLD-----YLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFT 256 (814)
T ss_pred cccCcchHHHHHHhccC---CCEEEechhhcccCHH-----HHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEe
Confidence 0000 1233333332 2256999999865321 111111111122110 00 00122333333
Q ss_pred --Ce------EEEEEecCCCc--CCC--------ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHH
Q 046207 269 --AS------AYIIVLSSYSA--YGK--------YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMR 330 (458)
Q Consensus 269 --g~------~~fi~Lds~~~--~~~--------~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~ 330 (458)
++ +-||++-+..- +.. ...-.+.+++...+.+..+.+.+|++.|..+.........++. .
T Consensus 257 d~~G~~~~vKIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En~--~ 334 (814)
T PRK11907 257 DTEGKKVTLNIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEENV--G 334 (814)
T ss_pred cCCCcccceEEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccch--h
Confidence 22 56677654321 110 1122233333333333356888999999987432211111111 1
Q ss_pred HHHHHHHHHcCccEEEecccccc
Q 046207 331 VAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 331 ~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
..+.+--+||++|.||.|..
T Consensus 335 ---~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 335 ---YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred ---hHHhcCCCCCEEEECCCCCc
Confidence 12222347999999999984
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.84 E-value=2.7e-05 Score=69.29 Aligned_cols=70 Identities=16% Similarity=0.267 Sum_probs=42.5
Q ss_pred EEEecCCCCCCc--------------HHH---HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 158 GIIGDLGQTYDS--------------NQT---FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 158 ~~~gD~~~~~~~--------------~~~---l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
++++|+|.+... .+. +.++++..+||.++++||+++..... ....+.... .+......+|
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~--~~~~~~~~~-~~~~~~~~~~ 77 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGL--SRQEFEEVA-FLRLLAKDVD 77 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccccc--CHHHHHHHH-HHHhccCCCe
Confidence 368899887421 122 23344444999999999999764311 112222211 2333345789
Q ss_pred eEEccCCccc
Q 046207 221 WIWVPGNHEL 230 (458)
Q Consensus 221 ~~~v~GNHD~ 230 (458)
+++++||||.
T Consensus 78 v~~i~GNHD~ 87 (172)
T cd07391 78 VILIRGNHDG 87 (172)
T ss_pred EEEEcccCcc
Confidence 9999999995
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00077 Score=56.96 Aligned_cols=66 Identities=20% Similarity=0.272 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCCc--------------HHHHHHHHhCCC-CcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 156 IFGIIGDLGQTYDS--------------NQTFEHYVSNPK-GQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 156 ~f~~~gD~~~~~~~--------------~~~l~~~~~~~~-pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
.+.++||+|.+... ...+..+.+..+ -|.+.++||++-... . -....+.++.+.. -
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n----~---~~~a~~IlerLnG--r 75 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGAN----R---ERAAGLILERLNG--R 75 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccc----h---hhHHHHHHHHcCC--c
Confidence 46789999987431 223444444443 478999999997654 2 1234556666543 3
Q ss_pred eEEccCCccc
Q 046207 221 WIWVPGNHEL 230 (458)
Q Consensus 221 ~~~v~GNHD~ 230 (458)
...|+||||-
T Consensus 76 khlv~GNhDk 85 (186)
T COG4186 76 KHLVPGNHDK 85 (186)
T ss_pred EEEeeCCCCC
Confidence 4889999993
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.70 E-value=7.5e-05 Score=69.70 Aligned_cols=70 Identities=13% Similarity=0.238 Sum_probs=42.6
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDS-NQTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-~~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++++++||+|..... .+.++.+.... ..|.++++||+++.+. +.. +.+..+++.+....+++.++||||.
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~----~s~--~v~~~l~~~~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGK----RSK--DVVNYIFDLMSNDDNVVTLLGNHDD 72 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCC----ChH--HHHHHHHHHhhcCCCeEEEECCcHH
Confidence 478999999965322 22233332222 3599999999999775 221 2222233322234578999999995
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.68 E-value=9.3e-05 Score=69.30 Aligned_cols=65 Identities=35% Similarity=0.518 Sum_probs=43.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCC-------------CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceE
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNP-------------KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWI 222 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~-------------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 222 (458)
|++++||+|... ..+.++++.. +.|.++++||+++.+. +. ....+.+..+.....++
T Consensus 2 ~i~vigDIHG~~---~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~----~s---~evl~~l~~l~~~~~~~ 71 (234)
T cd07423 2 PFDIIGDVHGCY---DELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGP----DS---PEVLRLVMSMVAAGAAL 71 (234)
T ss_pred CeEEEEECCCCH---HHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCC----CH---HHHHHHHHHHhhCCcEE
Confidence 799999999763 4444444332 2589999999999765 21 22334444443334678
Q ss_pred EccCCccc
Q 046207 223 WVPGNHEL 230 (458)
Q Consensus 223 ~v~GNHD~ 230 (458)
++.||||.
T Consensus 72 ~v~GNHE~ 79 (234)
T cd07423 72 CVPGNHDN 79 (234)
T ss_pred EEECCcHH
Confidence 99999995
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00013 Score=67.57 Aligned_cols=70 Identities=21% Similarity=0.358 Sum_probs=47.3
Q ss_pred eEEEEEecCCCCCCc--------------HHHHHHHH---hCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh
Q 046207 155 YIFGIIGDLGQTYDS--------------NQTFEHYV---SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA 217 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~--------------~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~ 217 (458)
-+.++++|+|.+... .++++++. +..+||.+|++||+.+... ....++.+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~----~~~~~~~~~~~l~~~-- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK----KGLEWRFIREFIEVT-- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC----ChHHHHHHHHHHHhc--
Confidence 467899999987421 13344333 3348999999999997654 223455555555543
Q ss_pred ccceEEccCCccc
Q 046207 218 YQAWIWVPGNHEL 230 (458)
Q Consensus 218 ~~P~~~v~GNHD~ 230 (458)
..+++.++||||.
T Consensus 89 ~~~v~~V~GNHD~ 101 (225)
T TIGR00024 89 FRDLILIRGNHDA 101 (225)
T ss_pred CCcEEEECCCCCC
Confidence 3589999999994
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0017 Score=70.49 Aligned_cols=48 Identities=25% Similarity=0.262 Sum_probs=29.4
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEecccccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYER 355 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r 355 (458)
.+.+.+|++.|..+-..... ...+. .-. .+.+. +||++|.||+|..-.
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~en--a~~-~l~~v~gID~IlgGHsH~~~~ 291 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGMEN--ASY-YLTEVPGVDAVLMGHSHTEVK 291 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccchh--hhH-HHhcCCCCCEEEECCCCCccc
Confidence 56888999999987432111 01111 111 13443 799999999998653
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0013 Score=75.44 Aligned_cols=48 Identities=19% Similarity=0.160 Sum_probs=31.5
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
.+.+.+|++.|...-....... ......+|.++ -+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~-----~en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSG-----AEDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCC-----cchHHHHHHHhCCCCcEEEeCCCcccc
Confidence 5788899999998754321111 11223345544 379999999999874
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00017 Score=68.90 Aligned_cols=64 Identities=28% Similarity=0.399 Sum_probs=42.6
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++++++||+|... ..+.++++. .+.|.++++||+++.+. +. ....+.+..+ ..+++.|.||||.
T Consensus 1 M~~~vIGDIHG~~---~~l~~ll~~~~~~~~~D~li~lGDlVdrGp----~s---~~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCY---DELQRLLEKIDFDPAKDTLWLVGDLVNRGP----DS---LEVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCH---HHHHHHHHhcCCCCCCCEEEEeCCccCCCc----CH---HHHHHHHHhc--CCCeEEEecChhH
Confidence 3689999999663 334444332 26899999999999875 22 1223333333 3468899999996
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00027 Score=66.56 Aligned_cols=74 Identities=16% Similarity=0.337 Sum_probs=46.8
Q ss_pred EEEecCCCCCCc--HH---HHHHHHhCC-----CCcEEEEcCccccCCCC-CCCc--------hhHHHHHHHHHHHHhhc
Q 046207 158 GIIGDLGQTYDS--NQ---TFEHYVSNP-----KGQAVLFVGDLSYADDH-PQHD--------NRRWDSWGRFVEKSTAY 218 (458)
Q Consensus 158 ~~~gD~~~~~~~--~~---~l~~~~~~~-----~pd~vl~~GDl~y~~~~-~~~~--------~~~~~~~~~~~~~l~~~ 218 (458)
+++||+|.+... .. .+.+.++.. ++|.|+++||+++.... .... ...+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999976431 22 223332222 56999999999986320 0000 12244456677777777
Q ss_pred cceEEccCCcccC
Q 046207 219 QAWIWVPGNHELD 231 (458)
Q Consensus 219 ~P~~~v~GNHD~~ 231 (458)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999973
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00026 Score=66.75 Aligned_cols=66 Identities=27% Similarity=0.356 Sum_probs=42.5
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCC------------CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceE
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNP------------KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWI 222 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~------------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 222 (458)
+|++++||+|.. ...+.++++.. +-|.++++||+++.+. +.. ...+.+..+.....++
T Consensus 1 ~~~~vIGDIHG~---~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp----~S~---~vl~~~~~~~~~~~~~ 70 (245)
T PRK13625 1 MKYDIIGDIHGC---YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGP----HSL---RMIEIVWELVEKKAAY 70 (245)
T ss_pred CceEEEEECccC---HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCc----ChH---HHHHHHHHHhhCCCEE
Confidence 378999999966 34444444331 2478999999999875 221 1223333333345789
Q ss_pred EccCCccc
Q 046207 223 WVPGNHEL 230 (458)
Q Consensus 223 ~v~GNHD~ 230 (458)
++.||||.
T Consensus 71 ~l~GNHE~ 78 (245)
T PRK13625 71 YVPGNHCN 78 (245)
T ss_pred EEeCccHH
Confidence 99999994
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0092 Score=54.58 Aligned_cols=247 Identities=17% Similarity=0.198 Sum_probs=126.1
Q ss_pred eEEEEEecCCCCCCcHHH----HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+|++++||. .+.....+ |..+.++.++||||..|-++-.+. .--|+.+..+++ ..+- +.+.|||=|
T Consensus 1 mriLfiGDv-vGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~-----Git~k~y~~l~~---~G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDV-VGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF-----GITEKIYKELLE---AGAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecc-cCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCc-----CCCHHHHHHHHH---hCCC-EEecccccc
Confidence 589999999 44333343 344555558999999999986653 233444444433 2334 459999998
Q ss_pred CCCCCCCCcccCcccceeeccccCCCC-CCCCceEEEEcCeEEEEEecC--CCcCCC-ChHHHHHHHHHhccccCCCCCe
Q 046207 231 DYAPEIGENVPFKPYTHRYHVPYRASQ-STSPLWYSIKRASAYIIVLSS--YSAYGK-YTPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~~P~~~~~-~~~~~~ys~~~g~~~fi~Lds--~~~~~~-~~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
..... ..+..-..++--|.+-+. ..+..|+-|...+..+.+.+- ...... ...-+.-+++.|.+.+ .+++.
T Consensus 71 d~~ei----~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQKEI----LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cchHH----HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 53211 111111222333433322 224557777776655544443 222111 2223444556665543 34568
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEe-
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTI- 385 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~- 385 (458)
+||-+|.-.-+... +| -++-+.+|.+|+-=|+|....-.++ -++|+.|++-
T Consensus 146 iiVDFHAEtTSEK~-----------a~-g~yldGrvsavvGTHTHV~TaD~rI----------------L~~GTayiTDv 197 (266)
T COG1692 146 IIVDFHAETTSEKN-----------AF-GWYLDGRVSAVVGTHTHVPTADERI----------------LPKGTAYITDV 197 (266)
T ss_pred EEEEccccchhhhh-----------hh-heEEcCeEEEEEeccCcccccccee----------------cCCCcEEEecC
Confidence 99999975432111 11 1233457999999999986544332 2667888764
Q ss_pred CCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEE--EE--EcCCCceeeeeEEEEEee
Q 046207 386 GDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFT--WH--RNHDNEAVVADSQWLFNR 449 (458)
Q Consensus 386 G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~--~~--~~~dg~~~~~D~~~i~~~ 449 (458)
|.-|..... --+. +.-....|..... .++++.++. +++. .+ +...|+++-+..+.|..+
T Consensus 198 GMtG~~dSv-iG~~-~e~~i~rFl~~~p--~rfeva~g~-~~l~GV~ieid~~Tg~a~kie~Iri~~~ 260 (266)
T COG1692 198 GMTGPYDSV-IGMN-PEEPIKRFLTGLP--QRFEVASGP-AQLNGVLIEIDDRTGKAVKIERIRIGED 260 (266)
T ss_pred ccccccccc-ccCC-hhHHHHHHHhCCC--ceeEecCCC-cEEEEEEEEecCCCCceEEEEEEEecCC
Confidence 444442211 0010 1111233444444 555554432 2211 12 223477766666666544
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00021 Score=65.63 Aligned_cols=61 Identities=21% Similarity=0.227 Sum_probs=40.7
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
|++++||+|.. ...+.++++. .++|.++++||+++.+. +. . +.++.+.. .+++.+.||||.
T Consensus 2 ri~~isDiHg~---~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~----~~---~---~~~~~l~~-~~~~~v~GNhe~ 66 (207)
T cd07424 2 RDFVVGDIHGH---YSLLQKALDAVGFDPARDRLISVGDLIDRGP----ES---L---ACLELLLE-PWFHAVRGNHEQ 66 (207)
T ss_pred CEEEEECCCCC---HHHHHHHHHHcCCCCCCCEEEEeCCcccCCC----CH---H---HHHHHHhc-CCEEEeECCChH
Confidence 68999999955 3344444332 26899999999998765 22 1 22222222 468899999995
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00079 Score=64.38 Aligned_cols=176 Identities=20% Similarity=0.248 Sum_probs=96.3
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHHhC--CCCcEEEEcCccccCCCCCC----CchhHHHHHHHHHH----HHhhccceEE
Q 046207 155 YIFGIIGDLGQTYDS-NQTFEHYVSN--PKGQAVLFVGDLSYADDHPQ----HDNRRWDSWGRFVE----KSTAYQAWIW 223 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-~~~l~~~~~~--~~pd~vl~~GDl~y~~~~~~----~~~~~~~~~~~~~~----~l~~~~P~~~ 223 (458)
+||++-||.|..-+. .+++..+.+. .+.|++|+.||+---....+ .-...+.....+++ ...+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 589999999865332 3344544444 38999999999853322100 01233333333332 2345788899
Q ss_pred ccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceE-----EEEcCeEEEEEecCCC---cCCCC----------
Q 046207 224 VPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWY-----SIKRASAYIIVLSSYS---AYGKY---------- 285 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~y-----s~~~g~~~fi~Lds~~---~~~~~---------- 285 (458)
+=||||.. .|. ..+|..+ -...+.|| .+.+|++++-+|..-. +|..+
T Consensus 81 IGGNHEAs------------nyL--~eLpyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEAS------------NYL--QELPYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHH------------HHH--HhcccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 99999952 121 1234321 11134555 3577899998887532 22211
Q ss_pred -------hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHH-----------------HHHHHHHHHHcC
Q 046207 286 -------TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESM-----------------RVAFESWFVQHK 341 (458)
Q Consensus 286 -------~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~-----------------~~~l~~ll~~~~ 341 (458)
-++.+= ..|.+. +.+--|.+.|-=+.+- .++++...+ ...+++||++-+
T Consensus 146 tiRsiYHvR~~dV--~~Lkql---k~piDIfLSHDWP~GI--~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~Lk 218 (456)
T KOG2863|consen 146 TIRSIYHVRISDV--AKLKQL---KHPIDIFLSHDWPRGI--YYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLK 218 (456)
T ss_pred hhhhhhhhhhhhh--HHHHhh---cCcceEEeecCCCcch--hhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhC
Confidence 122211 122232 2234577888644221 122221111 236788999999
Q ss_pred ccEEEeccccc
Q 046207 342 VDLVVAGHVHS 352 (458)
Q Consensus 342 Vdlvl~GH~H~ 352 (458)
...+|+.|.|.
T Consensus 219 P~yWfsAHLH~ 229 (456)
T KOG2863|consen 219 PQYWFSAHLHV 229 (456)
T ss_pred cchhhhhhHhh
Confidence 99999999996
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00047 Score=63.96 Aligned_cols=64 Identities=23% Similarity=0.322 Sum_probs=41.0
Q ss_pred EEEEecCCCCCCcHHHHHHHHhCC-----------CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEcc
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVSNP-----------KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVP 225 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~~~-----------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 225 (458)
+.++||+|... ..++++++.. ..|.++++||+++.+. +.. ...+.+..+...-.++.+.
T Consensus 1 ~~vIGDIHG~~---~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp----~S~---~vl~~l~~l~~~~~~~~l~ 70 (222)
T cd07413 1 YDFIGDIHGHA---EKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGP----EIR---ELLEIVKSMVDAGHALAVM 70 (222)
T ss_pred CEEEEeccCCH---HHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCC----CHH---HHHHHHHHhhcCCCEEEEE
Confidence 35899999763 4444443322 3579999999999876 221 2233333333334688899
Q ss_pred CCccc
Q 046207 226 GNHEL 230 (458)
Q Consensus 226 GNHD~ 230 (458)
||||.
T Consensus 71 GNHE~ 75 (222)
T cd07413 71 GNHEF 75 (222)
T ss_pred ccCcH
Confidence 99995
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0028 Score=67.85 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=28.6
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEecccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSY 353 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y 353 (458)
.+.+.+|++.|........... .+... ..+.+ -+||++|+||+|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~--~en~~----~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPG--AENSA----YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCccccc--cchHH----HHHhcCCCCCEEEcCCCCcc
Confidence 5688899999998753211111 11111 12344 37999999999985
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00034 Score=64.67 Aligned_cols=61 Identities=25% Similarity=0.356 Sum_probs=40.2
Q ss_pred EEEEEecCCCCCCcHHHHHHHHh----CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVS----NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
|++++||+|... ..+.++++ ..+.|.++++||+++.+. +.. ...+.+. . ..++.+.||||.
T Consensus 16 ri~visDiHg~~---~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~----~~~---~~l~~l~---~-~~~~~v~GNHE~ 80 (218)
T PRK09968 16 HIWVVGDIHGEY---QLLQSRLHQLSFCPETDLLISVGDNIDRGP----ESL---NVLRLLN---Q-PWFISVKGNHEA 80 (218)
T ss_pred eEEEEEeccCCH---HHHHHHHHhcCCCCCCCEEEECCCCcCCCc----CHH---HHHHHHh---h-CCcEEEECchHH
Confidence 899999999763 33333332 236899999999999875 221 1122222 2 246789999994
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0046 Score=66.40 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=28.3
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEecccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSY 353 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y 353 (458)
.+.+.+|++.|............++ .... +.+ -+||++|.||.|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~~aen-----~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKAMAEN-----SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccccccc-----hhHH-HhcCCCCCEEEeCCCCcc
Confidence 5688899999998743211111111 1111 233 47999999999985
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0072 Score=56.95 Aligned_cols=136 Identities=11% Similarity=0.170 Sum_probs=77.5
Q ss_pred EEEEecCCCCCCcH-----HHHHHHHh-C----------CCCcEEEEcCccccCCCCCC---------------CchhHH
Q 046207 157 FGIIGDLGQTYDSN-----QTFEHYVS-N----------PKGQAVLFVGDLSYADDHPQ---------------HDNRRW 205 (458)
Q Consensus 157 f~~~gD~~~~~~~~-----~~l~~~~~-~----------~~pd~vl~~GDl~y~~~~~~---------------~~~~~~ 205 (458)
++++||+|.+.... +.+..++. + .+...+|++||.+...+-.. ......
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 78999999875432 22222221 1 14457999999998654110 112345
Q ss_pred HHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCC---CCCCCceEEEEcCeEEEEEecCCCc-
Q 046207 206 DSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS---QSTSPLWYSIKRASAYIIVLSSYSA- 281 (458)
Q Consensus 206 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~---~~~~~~~ys~~~g~~~fi~Lds~~~- 281 (458)
+.+..++..+...+|+...|||||-.... +. +..+.. .. +|.... -..-..-|.|++++++|++.....-
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~-lP-Qqplh~--~l--fp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHS-LP-QQPLHR--CL--FPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCccccc-CC-CCCCCH--HH--hhcccccCCcEEeCCCeEEEECCEEEEEECCCCHH
Confidence 55677788888899999999999953211 00 111110 11 121100 0001224568899999998776542
Q ss_pred ----CCCChHHHHHHHHHhcc
Q 046207 282 ----YGKYTPQYAWLEKELPK 298 (458)
Q Consensus 282 ----~~~~~~Q~~WL~~~L~~ 298 (458)
|...+.-++.|++.|+.
T Consensus 156 Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 156 DILKYSSLESRLDILERTLKW 176 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHh
Confidence 33445557778887765
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00061 Score=63.04 Aligned_cols=61 Identities=21% Similarity=0.276 Sum_probs=40.4
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
|++++||+|... ..+.++++. .+.|-++++||+++.+. +.. ...+.+. . ..++.+.||||.
T Consensus 18 ri~vigDIHG~~---~~L~~lL~~i~~~~~~D~li~lGDlvDrGp----~s~---~vl~~l~---~-~~~~~v~GNHE~ 82 (218)
T PRK11439 18 HIWLVGDIHGCF---EQLMRKLRHCRFDPWRDLLISVGDLIDRGP----QSL---RCLQLLE---E-HWVRAVRGNHEQ 82 (218)
T ss_pred eEEEEEcccCCH---HHHHHHHHhcCCCcccCEEEEcCcccCCCc----CHH---HHHHHHH---c-CCceEeeCchHH
Confidence 899999999763 444444433 25789999999999876 221 1222222 2 246789999994
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00092 Score=63.58 Aligned_cols=68 Identities=19% Similarity=0.293 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHhC-----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhc---cceEEccC
Q 046207 156 IFGIIGDLGQTYDSNQ-TFEHYVSN-----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAY---QAWIWVPG 226 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~-~l~~~~~~-----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~---~P~~~v~G 226 (458)
++.++||.|....... .++.+.+. ...+.+|++||+++.+. +... ..+++..+... ..++++.|
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGP----dS~e---Vld~L~~l~~~~~~~~vv~LrG 75 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGP----ETRK---VIDFLISLPEKHPKQRHVFLCG 75 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCC----CHHH---HHHHHHHhhhcccccceEEEec
Confidence 6899999997643322 23333322 13568999999999876 3222 22333333222 25788999
Q ss_pred Cccc
Q 046207 227 NHEL 230 (458)
Q Consensus 227 NHD~ 230 (458)
|||.
T Consensus 76 NHE~ 79 (304)
T cd07421 76 NHDF 79 (304)
T ss_pred CChH
Confidence 9995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0009 Score=63.22 Aligned_cols=61 Identities=30% Similarity=0.420 Sum_probs=40.2
Q ss_pred EEEecCCCCCCcHHHHHHHHh----CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 158 GIIGDLGQTYDSNQTFEHYVS----NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 158 ~~~gD~~~~~~~~~~l~~~~~----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
.++||+|... ..+.++++ ..+.|.++++||+++.+. +. .+..+.+..+. ..+..+.||||.
T Consensus 2 yvIGDIHG~~---~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp----~s---~evl~~l~~l~--~~v~~VlGNHD~ 66 (257)
T cd07422 2 YAIGDIQGCY---DELQRLLEKINFDPAKDRLWLVGDLVNRGP----DS---LETLRFVKSLG--DSAKTVLGNHDL 66 (257)
T ss_pred EEEECCCCCH---HHHHHHHHhcCCCCCCCEEEEecCcCCCCc----CH---HHHHHHHHhcC--CCeEEEcCCchH
Confidence 5899998763 34444433 235799999999999875 22 12333343332 367899999996
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0015 Score=59.98 Aligned_cols=73 Identities=16% Similarity=0.214 Sum_probs=48.6
Q ss_pred eEEEEEecCCCCCCc-----------------HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh
Q 046207 155 YIFGIIGDLGQTYDS-----------------NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA 217 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-----------------~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~ 217 (458)
-+.++++|+|.+... ...++++++..+|+-+|++||+-.+.+.. ...+|+....+++.+..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~--~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKS--LRQEKEEVREFLELLDE 97 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCcc--ccccHHHHHHHHHHhcc
Confidence 478899999988531 12344556666999999999998876521 12334443444444333
Q ss_pred ccceEEccCCccc
Q 046207 218 YQAWIWVPGNHEL 230 (458)
Q Consensus 218 ~~P~~~v~GNHD~ 230 (458)
. -|+++.||||-
T Consensus 98 ~-evi~i~GNHD~ 109 (235)
T COG1407 98 R-EVIIIRGNHDN 109 (235)
T ss_pred C-cEEEEeccCCC
Confidence 2 59999999994
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0012 Score=61.23 Aligned_cols=63 Identities=21% Similarity=0.292 Sum_probs=39.6
Q ss_pred EEecCCCCCCcHHHHHHHHhC---CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-ccceEEccCCcccC
Q 046207 159 IIGDLGQTYDSNQTFEHYVSN---PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQAWIWVPGNHELD 231 (458)
Q Consensus 159 ~~gD~~~~~~~~~~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 231 (458)
++||+|... ..+.++++. .+.|.+|++||+++.+. .. ....+.+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~---~~l~~~l~~~~~~~~d~li~lGD~vdrg~----~~---~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCL---DDLLRLLEKIGFPPNDKLIFLGDYVDRGP----DS---VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCH---HHHHHHHHHhCCCCCCEEEEECCEeCCCC----Cc---HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 799999653 344443332 27899999999999765 21 122222222221 34789999999963
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0091 Score=45.52 Aligned_cols=70 Identities=27% Similarity=0.296 Sum_probs=45.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+++..-.. +++.|+|..+... ..-.|+|....+.... ...... .-...++|++|+|+|.|
T Consensus 2 ~P~~l~v~~~~~--~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~----~~~~~~------~~~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNISP--TSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDW----QEVTVP------GNETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEECS--SEEEEEEEESSSTSSSESEEEEEEEETTSSSEE----EEEEEE------TTSSEEEEESCCTTSEE
T ss_pred cCcCeEEEECCC--CEEEEEEECCCCCCCCeeEEEEEEEecccceee----eeeeee------eeeeeeeeccCCCCCEE
Confidence 677888887643 6999999988411 2236677665543300 111111 11236788999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.++|..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0035 Score=59.48 Aligned_cols=66 Identities=29% Similarity=0.350 Sum_probs=40.3
Q ss_pred EEEEEecCCCCCCcH-HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSN-QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~-~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++.++||+|...... ..++++.-+.+.|-++++||+++.+. +.. ...+.+..+. ..+..|.||||.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP----~sl---evL~~l~~l~--~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGP----GSL---EVLRYVKSLG--DAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCC----CHH---HHHHHHHhcC--CCeEEEEChhHH
Confidence 467899998764332 22333322235689999999999876 221 1223333331 235689999995
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.011 Score=55.59 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=38.2
Q ss_pred HHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 290 AWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 290 ~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
+-+++.++++++. .+.+||+.|...-... ........+...+...++|+|+.||.|..+-.
T Consensus 162 ~~~~~~i~~lr~~-~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAKKK-ADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHhhc-CCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 3455555554433 7899999997542111 11223334555555678999999999987654
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0086 Score=60.50 Aligned_cols=45 Identities=22% Similarity=0.207 Sum_probs=35.1
Q ss_pred CCCeEEEEEecCCCCCC---------cHHHHHHH---HhCCCCcEEEEcCccccCCC
Q 046207 152 DVPYIFGIIGDLGQTYD---------SNQTFEHY---VSNPKGQAVLFVGDLSYADD 196 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~---------~~~~l~~~---~~~~~pd~vl~~GDl~y~~~ 196 (458)
...+||++.+|.|.++. +..++.++ +++.+.|+||..|||+.++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 46799999999998853 44555544 44459999999999999876
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.035 Score=46.67 Aligned_cols=85 Identities=18% Similarity=0.259 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCC-CCCCCCCCCCCCCCCCccee
Q 046207 331 VAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGG-NIEGLADRYTEPQPSYSAYR 409 (458)
Q Consensus 331 ~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG-~~~~~~~~~~~~~p~~s~~~ 409 (458)
+.|.-+-++..||+.+.||+|.++... -+|-.||-.|++- +... .+..
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye-------------------~eg~ffvnPGSaTGAfn~-----~~t~------- 145 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE-------------------HEGKFFVNPGSATGAFNV-----SDTD------- 145 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE-------------------eCCcEEeCCCcccCCCcc-----cccC-------
Confidence 345556677899999999999988754 3566677777653 3211 1111
Q ss_pred eCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEe
Q 046207 410 EASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFN 448 (458)
Q Consensus 410 ~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 448 (458)
.....|..++|...+.+++- ++--||+ |.+|.+...|
T Consensus 146 ~~~PSFvLmDiqg~~~v~Yv-Y~lidge-VkVdki~ykK 182 (183)
T KOG3325|consen 146 IIVPSFVLMDIQGSTVVTYV-YRLIDGE-VKVDKIEYKK 182 (183)
T ss_pred CCCCceEEEEecCCEEEEEE-eeeeCCc-EEEEEEEecC
Confidence 13457999999776655544 3446787 4788887765
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.1 Score=48.51 Aligned_cols=192 Identities=17% Similarity=0.161 Sum_probs=89.6
Q ss_pred EEEecCCCCCCc----HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCC
Q 046207 158 GIIGDLGQTYDS----NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYA 233 (458)
Q Consensus 158 ~~~gD~~~~~~~----~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 233 (458)
+++||. .+... ...|..+.++.++||||..|.++-.+. .--.+.+.++++ ..+-+ .+.|||=|...
T Consensus 1 LfiGDI-vG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~-----Git~~~~~~L~~---~GvDv-iT~GNH~wdkk 70 (253)
T PF13277_consen 1 LFIGDI-VGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGF-----GITPKIAEELFK---AGVDV-ITMGNHIWDKK 70 (253)
T ss_dssp EEE-EB-BCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTS-----S--HHHHHHHHH---HT-SE-EE--TTTTSST
T ss_pred CeEEec-CCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCC-----CCCHHHHHHHHh---cCCCE-EecCcccccCc
Confidence 367887 33222 234556666669999999999996553 111122222221 23443 48999998532
Q ss_pred CCCCCcccCcccceeeccccCCCC-CCCCceEEEEcCeEEEEEecCC--CcCCCChHHHHHHHHHhccccCCCCCeEEEE
Q 046207 234 PEIGENVPFKPYTHRYHVPYRASQ-STSPLWYSIKRASAYIIVLSSY--SAYGKYTPQYAWLEKELPKVNRAETPWLIVL 310 (458)
Q Consensus 234 ~~~~~~~~~~~~~~~f~~P~~~~~-~~~~~~ys~~~g~~~fi~Lds~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~ 310 (458)
.. ..+-.-..+.--|.+-+. ..+..|..++.++..+.++|-. .......--+..+++.|++. +.+.+.+||=
T Consensus 71 ei----~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVD 145 (253)
T PF13277_consen 71 EI----FDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVD 145 (253)
T ss_dssp TH----HHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEE
T ss_pred HH----HHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEE
Confidence 11 111111122223443332 3356788888888777666643 22222223344445555543 2467889999
Q ss_pred eccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEe-CCCC
Q 046207 311 LHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTI-GDGG 389 (458)
Q Consensus 311 ~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~-G~gG 389 (458)
+|.=.-+ .+.-.-++-.-+|.+|+--|+|....-.++ -++|+.||+- |.-|
T Consensus 146 FHAEaTS------------EK~A~g~~lDGrvsaV~GTHTHVqTaDerI----------------Lp~GTaYiTDvGMtG 197 (253)
T PF13277_consen 146 FHAEATS------------EKQAMGWYLDGRVSAVVGTHTHVQTADERI----------------LPGGTAYITDVGMTG 197 (253)
T ss_dssp EE-S-HH------------HHHHHHHHHBTTBSEEEEESSSS-BS--EE-----------------TTS-EEES---EBE
T ss_pred eecCcHH------------HHHHHHHHhCCcEEEEEeCCCCccCchhhc----------------cCCCCEEEecCcccc
Confidence 9853221 122233556678999999999986443222 2678888864 5555
Q ss_pred CCC
Q 046207 390 NIE 392 (458)
Q Consensus 390 ~~~ 392 (458)
...
T Consensus 198 ~~d 200 (253)
T PF13277_consen 198 PYD 200 (253)
T ss_dssp ESS
T ss_pred Ccc
Confidence 543
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.018 Score=54.09 Aligned_cols=60 Identities=13% Similarity=0.198 Sum_probs=36.9
Q ss_pred HHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 292 LEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 292 L~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+++.+++++. +.+.+||+.|-..-.... .......+...+.+.++|+|+.||.|..+-..
T Consensus 162 i~~~i~~lr~-~~D~vIv~~H~G~e~~~~-----p~~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 162 ILADIARARK-KADVVIVSLHWGVEYQYE-----PTDEQRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHhc-cCCEEEEEecCccccCCC-----CCHHHHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 4444444432 578999999987532111 11222334444445789999999999887543
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.16 Score=47.46 Aligned_cols=71 Identities=18% Similarity=0.184 Sum_probs=43.9
Q ss_pred CCCCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 151 PDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
...-.+|+.++|.|.-... +..-+.-|+++++||...-+. ..+-..|.+.+..+.-. =-+++.||||.
T Consensus 58 ~~~~~r~VcisdtH~~~~~------i~~~p~gDvlihagdfT~~g~-----~~ev~~fn~~~gslph~-yKIVIaGNHEL 125 (305)
T KOG3947|consen 58 GPGYARFVCISDTHELTFD------INDIPDGDVLIHAGDFTNLGL-----PEEVIKFNEWLGSLPHE-YKIVIAGNHEL 125 (305)
T ss_pred CCCceEEEEecCcccccCc------cccCCCCceEEeccCCccccC-----HHHHHhhhHHhccCcce-eeEEEeeccce
Confidence 4456899999999865322 112347799999999997543 22223343433322111 13679999998
Q ss_pred CCC
Q 046207 231 DYA 233 (458)
Q Consensus 231 ~~~ 233 (458)
...
T Consensus 126 tFd 128 (305)
T KOG3947|consen 126 TFD 128 (305)
T ss_pred eec
Confidence 654
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.013 Score=56.90 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC---CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhcc--ceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN---PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQ--AWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD~ 230 (458)
+++++||+|... ..+.++.+. +..+-+|++||+++.+. +.. +. ...+..+.-.. -++.+.||||.
T Consensus 44 ~i~ViGDIHG~~---~dL~~l~~~~g~~~~~~ylFLGDyVDRG~----~s~--Ev-i~lL~~lki~~p~~v~lLRGNHE~ 113 (305)
T cd07416 44 PVTVCGDIHGQF---YDLLKLFEVGGSPANTRYLFLGDYVDRGY----FSI--EC-VLYLWALKILYPKTLFLLRGNHEC 113 (305)
T ss_pred CEEEEEeCCCCH---HHHHHHHHhcCCCCCceEEEECCccCCCC----ChH--HH-HHHHHHHHhhcCCCEEEEeCCCcH
Confidence 589999998653 233333332 24588999999999875 211 11 12222222222 47889999996
Q ss_pred C
Q 046207 231 D 231 (458)
Q Consensus 231 ~ 231 (458)
.
T Consensus 114 ~ 114 (305)
T cd07416 114 R 114 (305)
T ss_pred H
Confidence 3
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.01 Score=55.28 Aligned_cols=174 Identities=13% Similarity=0.135 Sum_probs=96.1
Q ss_pred CcEEEEcCccccCCCCCCCc---hhHHHHHHHH----HHHHhhccceEEccCCcccCCCCCCCCc----ccCcccce---
Q 046207 182 GQAVLFVGDLSYADDHPQHD---NRRWDSWGRF----VEKSTAYQAWIWVPGNHELDYAPEIGEN----VPFKPYTH--- 247 (458)
Q Consensus 182 pd~vl~~GDl~y~~~~~~~~---~~~~~~~~~~----~~~l~~~~P~~~v~GNHD~~~~~~~~~~----~~~~~~~~--- 247 (458)
|--++..||+++.++....+ ..++..|... ..++...+|+|.-.||||.....-.... +....|..
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 44577888999987743221 1222222111 1223335899999999998533210000 00011110
Q ss_pred ---eeccccCCCC--CCCCceEEEEcCeEEEEEecCCCcC-CC-ChHHHHHHHHHhccccCCCCCeEEEEecccccc--C
Q 046207 248 ---RYHVPYRASQ--STSPLWYSIKRASAYIIVLSSYSAY-GK-YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYN--S 318 (458)
Q Consensus 248 ---~f~~P~~~~~--~~~~~~ys~~~g~~~fi~Lds~~~~-~~-~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~--~ 318 (458)
.|.-|...+. .....-||++.|+++.+-+-....- .. ...-+-||+.+|..... ..+-++++.|.-+.. +
T Consensus 207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aa-dgrpv~LfqhyGwdtfst 285 (392)
T COG5555 207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAA-DGRPVYLFQHYGWDTFST 285 (392)
T ss_pred CcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeecc-CCCceeehhhhCccceec
Confidence 1111111111 1234578999999888766543210 01 13346799999987432 334588999987632 2
Q ss_pred CCCCC--------cc------chHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 319 NSYHY--------ME------GESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 319 ~~~~~--------~~------~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
..+.. ++ ....+..|...++-|+|.-.+.||.|...-.
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ma 337 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMA 337 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEecccccccccee
Confidence 22110 00 2345678888899999999999999987443
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.022 Score=54.45 Aligned_cols=66 Identities=15% Similarity=0.193 Sum_probs=40.3
Q ss_pred EEEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~ 230 (458)
+++++||+|... ..+.++.+ ....+-++++||+++.+. +.. +. ...+..+. ...-++.+.||||.
T Consensus 29 ~i~vvGDiHG~~---~~l~~ll~~~~~~~~~~~vfLGD~VDrG~----~s~--e~-l~~l~~lk~~~p~~v~llrGNHE~ 98 (271)
T smart00156 29 PVTVCGDIHGQF---DDLLRLFDLNGPPPDTNYVFLGDYVDRGP----FSI--EV-ILLLFALKILYPNRVVLLRGNHES 98 (271)
T ss_pred CEEEEEeCcCCH---HHHHHHHHHcCCCCCceEEEeCCccCCCC----ChH--HH-HHHHHHHHhcCCCCEEEEeccccH
Confidence 689999998653 33333332 225688999999999775 211 11 12222221 12357899999997
Q ss_pred C
Q 046207 231 D 231 (458)
Q Consensus 231 ~ 231 (458)
.
T Consensus 99 ~ 99 (271)
T smart00156 99 R 99 (271)
T ss_pred H
Confidence 3
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.067 Score=55.13 Aligned_cols=59 Identities=20% Similarity=0.358 Sum_probs=39.4
Q ss_pred hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccE-EEecccccccc
Q 046207 286 TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDL-VVAGHVHSYER 355 (458)
Q Consensus 286 ~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdl-vl~GH~H~y~r 355 (458)
-.|.+|-.+.++. .+.+-+|++.|.|.-....+ ...+..+...+ ++++ ||-||.|....
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~e~--------~~~~~~ir~~~p~t~IqviGGHshird~ 271 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDDEW--------KSLHAEIRKVHPNTPIQVIGGHSHIRDF 271 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccchhh--------hhHHHHHhhhCCCCceEEECchhhhhhh
Confidence 4577888888877 67888999999997432111 11333444444 5777 99999997543
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.03 Score=53.82 Aligned_cols=65 Identities=17% Similarity=0.182 Sum_probs=39.1
Q ss_pred EEEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~ 230 (458)
.+.++||+|... ..+.++.+ ....+-+|++||+++.+. +.. + ....+..+. ....++.+.||||.
T Consensus 43 ~i~vvGDIHG~~---~dL~~ll~~~~~~~~~~~lfLGDyVDRG~----~s~--e-vl~ll~~lk~~~p~~v~llrGNHE~ 112 (285)
T cd07415 43 PVTVCGDIHGQF---YDLLELFRVGGDPPDTNYLFLGDYVDRGY----YSV--E-TFLLLLALKVRYPDRITLLRGNHES 112 (285)
T ss_pred CEEEEEeCCCCH---HHHHHHHHHcCCCCCCeEEEEeEECCCCc----CHH--H-HHHHHHHHhhcCCCcEEEEecccch
Confidence 488999998653 22333322 224568999999999875 211 1 112222222 12358999999996
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.032 Score=54.38 Aligned_cols=66 Identities=17% Similarity=0.058 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCC----CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCcc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNP----KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNHE 229 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~----~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD 229 (458)
++.++||+|... ..+.++.+.. ..+.+|++||+++.+. +.- +. ...+-.+. ...-++.+.||||
T Consensus 52 ~~~vvGDiHG~~---~dL~~il~~~g~~~~~~~~lFLGDyVDRG~----~s~--Ev-l~ll~~lk~~~p~~v~llRGNHE 121 (321)
T cd07420 52 QVTICGDLHGKL---DDLFLIFYKNGLPSPENPYVFNGDFVDRGK----RSI--EI-LIILFAFFLVYPNEVHLNRGNHE 121 (321)
T ss_pred CeEEEEeCCCCH---HHHHHHHHHcCCCCccceEEEeccccCCCC----CcH--HH-HHHHHHHhhcCCCcEEEecCchh
Confidence 689999998663 3344444321 2367999999999876 211 11 12222222 1234788999999
Q ss_pred cC
Q 046207 230 LD 231 (458)
Q Consensus 230 ~~ 231 (458)
..
T Consensus 122 ~~ 123 (321)
T cd07420 122 DH 123 (321)
T ss_pred hh
Confidence 74
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.039 Score=53.30 Aligned_cols=66 Identities=20% Similarity=0.315 Sum_probs=38.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC---CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN---PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~ 230 (458)
.++++||+|... ..+.++.+. +..+-+|++||+++.+. ... +.+ ..+..+.- ..-++.+.||||.
T Consensus 51 ~i~viGDIHG~~---~~L~~l~~~~~~~~~~~~lfLGDyVDRG~----~s~--e~i-~ll~~lk~~~p~~i~llrGNHE~ 120 (293)
T cd07414 51 PLKICGDIHGQY---YDLLRLFEYGGFPPESNYLFLGDYVDRGK----QSL--ETI-CLLLAYKIKYPENFFLLRGNHEC 120 (293)
T ss_pred ceEEEEecCCCH---HHHHHHHHhcCCCCcceEEEEeeEecCCC----CcH--HHH-HHHHHhhhhCCCcEEEEecccch
Confidence 588999998653 223333322 24567899999999875 211 111 11112211 2247889999997
Q ss_pred C
Q 046207 231 D 231 (458)
Q Consensus 231 ~ 231 (458)
.
T Consensus 121 ~ 121 (293)
T cd07414 121 A 121 (293)
T ss_pred h
Confidence 3
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.045 Score=53.06 Aligned_cols=65 Identities=14% Similarity=0.246 Sum_probs=38.7
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC---CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhc--cceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN---PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAY--QAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~ 230 (458)
.+.++||+|... ..+.++.+. ...+-+|++||+++.+. +.. +. ...+..+.-. .-++.+.||||.
T Consensus 44 ~i~vvGDIHG~~---~~L~~l~~~~~~~~~~~~lfLGDyVDRG~----~s~--ev-l~ll~~lk~~~p~~v~llrGNHE~ 113 (303)
T PTZ00239 44 PVNVCGDIHGQF---YDLQALFKEGGDIPNANYIFIGDFVDRGY----NSV--ET-MEYLLCLKVKYPGNITLLRGNHES 113 (303)
T ss_pred CEEEEEeCCCCH---HHHHHHHHhcCCCCCceEEEeeeEcCCCC----CHH--HH-HHHHHHhhhcCCCcEEEEecccch
Confidence 388999998653 333333331 24567999999999875 211 11 1122222212 247889999996
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.071 Score=53.78 Aligned_cols=81 Identities=14% Similarity=0.279 Sum_probs=53.3
Q ss_pred CCCCeEEEEEecCCCCCCc------HHHHHHHHhC----CCCcEEEEcCccccCCC-CCCCc--------hhHHHHHHHH
Q 046207 151 PDVPYIFGIIGDLGQTYDS------NQTFEHYVSN----PKGQAVLFVGDLSYADD-HPQHD--------NRRWDSWGRF 211 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~------~~~l~~~~~~----~~pd~vl~~GDl~y~~~-~~~~~--------~~~~~~~~~~ 211 (458)
....+++++++|.|.+... ...++.+.-. .+...++.+||+++.-+ ++.++ ..+++.+.++
T Consensus 222 ~~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~ 301 (481)
T COG1311 222 GDERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEF 301 (481)
T ss_pred CCcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHH
Confidence 3467899999999987421 1112222111 14578999999999654 33322 3456666677
Q ss_pred HHHHhhccceEEccCCcccC
Q 046207 212 VEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 212 ~~~l~~~~P~~~v~GNHD~~ 231 (458)
+..+...+-++..|||||..
T Consensus 302 L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 302 LDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HhhCCCCceEEEecCCCCcc
Confidence 77666678899999999964
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.041 Score=54.68 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=40.0
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCC---CC-cEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNP---KG-QAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNH 228 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~---~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNH 228 (458)
-++.++||+|... ..+..+.+.. .. +.+|++||+++.+. +.. +. ...+..+.- ..-++.+.|||
T Consensus 66 ~~i~VvGDIHG~~---~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp----~Sl--Ev-l~lL~~lki~~p~~v~lLRGNH 135 (377)
T cd07418 66 CEVVVVGDVHGQL---HDVLFLLEDAGFPDQNRFYVFNGDYVDRGA----WGL--ET-FLLLLSWKVLLPDRVYLLRGNH 135 (377)
T ss_pred CCEEEEEecCCCH---HHHHHHHHHhCCCCCCceEEEeccccCCCC----ChH--HH-HHHHHHHhhccCCeEEEEeeec
Confidence 3689999998663 3344444322 22 45999999998875 211 11 122222221 23478999999
Q ss_pred ccC
Q 046207 229 ELD 231 (458)
Q Consensus 229 D~~ 231 (458)
|..
T Consensus 136 E~~ 138 (377)
T cd07418 136 ESK 138 (377)
T ss_pred ccc
Confidence 974
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.049 Score=52.56 Aligned_cols=66 Identities=20% Similarity=0.239 Sum_probs=38.2
Q ss_pred EEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHH-HHHhhccceEEccCCcccC
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFV-EKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~~ 231 (458)
+.++||+|... ..+.++.+ ....+-+|++||+++.+. +.. +.+...+ -.+.....++.+.||||..
T Consensus 54 ~~ViGDIHG~~---~~L~~l~~~~~~~~~~~~lfLGDyVDRG~----~s~--evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQY---YDLLRIFEKCGFPPYSNYLFLGDYVDRGK----HSV--ETITLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCH---HHHHHHHHHcCCCCcccEEEeeeEecCCC----CHH--HHHHHHHHHhhccCCeEEEEecccchH
Confidence 67899998653 33333332 224456889999999875 211 1111111 1111234688999999963
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.15 Score=54.42 Aligned_cols=88 Identities=27% Similarity=0.411 Sum_probs=54.4
Q ss_pred CCCCCccE-EEEecCCCCCceEEEEEcCCCCCCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCC
Q 046207 50 GFNAPEQV-HITQGDHDGRSVIVSWVTPDEKYPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124 (458)
Q Consensus 50 ~~~~p~~v-~~~~~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 124 (458)
+..+|..| ++-...-..++++++|.-++.+... .|+|-++..+. .+|.. ...-...|+|+||+|
T Consensus 439 ~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e--------~~~~~---~~t~~~~~ti~gL~p 507 (996)
T KOG0196|consen 439 NQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDE--------RSYST---LKTKTTTATITGLKP 507 (996)
T ss_pred cccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccc--------cceeE---EecccceEEeeccCC
Confidence 44455442 2233334457999999988765543 45555543211 11110 011234689999999
Q ss_pred CCEEEEEeCC------CCccceEEEECCCC
Q 046207 125 DTKYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 125 ~t~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
+|.|.+||.. |..|....|.|.+.
T Consensus 508 ~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 508 GTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred CcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 9999999875 56677889999885
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.053 Score=52.85 Aligned_cols=66 Identities=20% Similarity=0.306 Sum_probs=38.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~ 230 (458)
+++++||+|... ..+.++.+ .+..+-+|++||+++.+. +.. +.+ ..+..+.- ...++.+.||||.
T Consensus 60 ~i~vvGDIHG~~---~dL~~l~~~~g~~~~~~ylfLGDyVDRG~----~s~--evl-~ll~~lki~~p~~v~llRGNHE~ 129 (320)
T PTZ00480 60 PLKICGDVHGQY---FDLLRLFEYGGYPPESNYLFLGDYVDRGK----QSL--ETI-CLLLAYKIKYPENFFLLRGNHEC 129 (320)
T ss_pred CeEEEeecccCH---HHHHHHHHhcCCCCcceEEEeceecCCCC----CcH--HHH-HHHHHhcccCCCceEEEecccch
Confidence 588999998653 33333332 224567899999999875 211 111 11222211 2257889999996
Q ss_pred C
Q 046207 231 D 231 (458)
Q Consensus 231 ~ 231 (458)
.
T Consensus 130 ~ 130 (320)
T PTZ00480 130 A 130 (320)
T ss_pred h
Confidence 3
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.093 Score=51.21 Aligned_cols=66 Identities=15% Similarity=0.094 Sum_probs=39.1
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCC----CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNP----KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNH 228 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~----~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNH 228 (458)
-++.++||+|... ..+.++.+.. .-|-+|++||+++.+. +.. +.+ ..+-.+. ...-++.+.|||
T Consensus 60 ~~~~VvGDIHG~~---~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~----~S~--Evl-~ll~~lki~~p~~v~lLRGNH 129 (316)
T cd07417 60 EKITVCGDTHGQF---YDLLNIFELNGLPSETNPYLFNGDFVDRGS----FSV--EVI-LTLFAFKLLYPNHFHLNRGNH 129 (316)
T ss_pred ceeEEeecccCCH---HHHHHHHHhcCCCCccCeEEEEeeEecCCC----ChH--HHH-HHHHHhhhccCCceEEEeecc
Confidence 3689999998653 3344343322 2257999999999875 211 111 1111221 123478899999
Q ss_pred cc
Q 046207 229 EL 230 (458)
Q Consensus 229 D~ 230 (458)
|.
T Consensus 130 E~ 131 (316)
T cd07417 130 ET 131 (316)
T ss_pred ch
Confidence 96
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.17 Score=49.43 Aligned_cols=21 Identities=5% Similarity=0.298 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCccEEEeccc
Q 046207 330 RVAFESWFVQHKVDLVVAGHV 350 (458)
Q Consensus 330 ~~~l~~ll~~~~Vdlvl~GH~ 350 (458)
.+++...+++++.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467888999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.27 Score=46.46 Aligned_cols=64 Identities=11% Similarity=0.159 Sum_probs=44.1
Q ss_pred HHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 288 QYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 288 Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+.+.+.+++++++ ++.+++||++|.-.-.. . ......+.+...+-+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~----~-~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYE----N-YPTPEQRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCC----C-CCCHHHHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4478888888876 56889999999753211 1 112333445555555899999999999987654
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=91.50 E-value=1.2 Score=33.24 Aligned_cols=70 Identities=24% Similarity=0.357 Sum_probs=38.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.... ..++.|+|...... ..-.|+|......... .+.. ...-..++.+.+|.|++.|
T Consensus 3 ~p~~~~~~~~~--~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~-------~~~~---~~~~~~~~~i~~l~p~~~Y 70 (93)
T cd00063 3 PPTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDWK-------EVEV---TPGSETSYTLTGLKPGTEY 70 (93)
T ss_pred CCCCcEEEEec--CCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCE-------Eeec---cCCcccEEEEccccCCCEE
Confidence 34445444443 36999999876432 1234445443211111 1110 0023456788999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.++|..
T Consensus 71 ~~~v~a 76 (93)
T cd00063 71 EFRVRA 76 (93)
T ss_pred EEEEEE
Confidence 999864
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=91.39 E-value=1.6 Score=31.40 Aligned_cols=71 Identities=18% Similarity=0.232 Sum_probs=39.7
Q ss_pred CccEEEEecCCCCCceEEEEEcCCCCC--CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 54 PEQVHITQGDHDGRSVIVSWVTPDEKY--PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 54 p~~v~~~~~~~~~~~~~i~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
|..+++....+ +++.|+|..+.... ...++|........ .... ... .........+.+|+|++.|.++
T Consensus 4 p~~~~~~~~~~--~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~--~~~~--~~~----~~~~~~~~~i~~L~~~~~Y~v~ 73 (83)
T smart00060 4 PSNLRVTDVTS--TSVTLSWEPPPDDGITGYIVGYRVEYREEG--SSWK--EVN----VTPSSTSYTLTGLKPGTEYEFR 73 (83)
T ss_pred CCcEEEEEEeC--CEEEEEECCCCCCCCCccEEEEEEEEecCC--CccE--EEE----ecCCccEEEEeCcCCCCEEEEE
Confidence 33366665544 39999998553221 23566655432211 0011 110 0111467889999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 74 v~a 76 (83)
T smart00060 74 VRA 76 (83)
T ss_pred EEE
Confidence 864
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=90.73 E-value=0.44 Score=53.10 Aligned_cols=80 Identities=18% Similarity=0.271 Sum_probs=48.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC-C-----eEEEEecCCCC---ceEEEEEEEEEEecccccceEEEEEecCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP-N-----VVTHWEANSKR---KHKTHSIIKTYRYFNYSSGYIHHATIKRL 122 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~-~-----~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~gL 122 (458)
.+|+.|.+-.. .+++++|+|..+.+... + .++|++.+... +..+.|.. +. -.+++|
T Consensus 617 aPP~Nl~lev~--sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n~-----------~~--~l~~~L 681 (1381)
T KOG4221|consen 617 APPQNLSLEVV--SSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGNT-----------TQ--YLFNGL 681 (1381)
T ss_pred CCCcceEEEec--CCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccch-----------hh--hHhhcC
Confidence 36665666544 45899999998864322 1 34555443321 11222221 11 246789
Q ss_pred CCCCEEEEEeCC------CCccceEEEECC
Q 046207 123 KYDTKYFYQLGS------GNATRRFHFTTP 146 (458)
Q Consensus 123 ~p~t~Y~Y~v~~------g~~~~~~~f~T~ 146 (458)
+|+|.|.+||.. |..+.+..+.|+
T Consensus 682 ep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~ 711 (1381)
T KOG4221|consen 682 EPNTQYRVRISAMTVNGTGPASEWVSAETP 711 (1381)
T ss_pred CCCceEEEEEEEeccCCCCCcccceeccCc
Confidence 999999999875 444567777775
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=89.96 E-value=0.39 Score=43.88 Aligned_cols=76 Identities=13% Similarity=0.104 Sum_probs=41.3
Q ss_pred EEEEecCCCCCC--cHHHHHHHHh----CCCCcEEEEcCccccCCCCCC-------CchhHH---HHHHHHHHHHhhccc
Q 046207 157 FGIIGDLGQTYD--SNQTFEHYVS----NPKGQAVLFVGDLSYADDHPQ-------HDNRRW---DSWGRFVEKSTAYQA 220 (458)
Q Consensus 157 f~~~gD~~~~~~--~~~~l~~~~~----~~~pd~vl~~GDl~y~~~~~~-------~~~~~~---~~~~~~~~~l~~~~P 220 (458)
|++++|.+...+ ..+.+.++++ ..+|+.+|++|++++...... ...... ..+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 678999987743 2444555553 337999999999998643100 000011 111233344445789
Q ss_pred eEEccCCcccCC
Q 046207 221 WIWVPGNHELDY 232 (458)
Q Consensus 221 ~~~v~GNHD~~~ 232 (458)
++.+||+||...
T Consensus 81 vvlvPg~~D~~~ 92 (209)
T PF04042_consen 81 VVLVPGPNDPTS 92 (209)
T ss_dssp EEEE--TTCTT-
T ss_pred EEEeCCCccccc
Confidence 999999999743
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=83.71 E-value=2 Score=39.57 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=37.4
Q ss_pred EEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHH-HHHhhccceEEccCCcccC
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFV-EKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~~ 231 (458)
+.+.||+|......-.+=++.....-.=.|++||+++.+- +. -+.|.-++ -++.-.-.+..+.||||-.
T Consensus 45 vtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~----~S--vEt~lLLl~lK~rYP~ritLiRGNHEsR 114 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGY----YS--VETFLLLLALKVRYPDRITLIRGNHESR 114 (303)
T ss_pred cEEeecccchHHHHHHHHHhCCCCCCCceEeecchhcccc----ch--HHHHHHHHHHhhcCcceeEEeeccchhh
Confidence 4579999865322222222332323345789999999875 21 23332221 1111233477899999953
|
|
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=82.81 E-value=6.1 Score=44.25 Aligned_cols=88 Identities=22% Similarity=0.241 Sum_probs=53.8
Q ss_pred CCCCccEEEEecCCCCCceEEEEEcCCC----CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 51 FNAPEQVHITQGDHDGRSVIVSWVTPDE----KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 51 ~~~p~~v~~~~~~~~~~~~~i~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
..+|+.+++...+. +++.|+|..+.- ...-.|+|+...+.... ..... ..+-.-.+.|+||+|+|
T Consensus 820 ~~ap~~~~~~~~s~--s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~~-----~~~~~----i~~~~~~~~ltgL~~~T 888 (1051)
T KOG3513|consen 820 PVAPTKLSAKPLSS--SEVNLSWKPPLWDNGKLTGYEVKYWKINEKEGS-----LSRVQ----IAGNRTSWRLTGLEPNT 888 (1051)
T ss_pred CCCCccceeecccC--ceEEEEecCcCccCCccceeEEEEEEcCCCccc-----cccee----ecCCcceEeeeCCCCCc
Confidence 35788877776553 699999965421 23458899988765311 11111 11223447899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPPKV 149 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p~~ 149 (458)
.|++.+.. |..+....-.|.+.+
T Consensus 889 ~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~p 917 (1051)
T KOG3513|consen 889 KYRFYVRAYTSAGGGPASSEENVTTKKAP 917 (1051)
T ss_pred eEEEEEEEecCCCCCCCccceeccccCCC
Confidence 99999875 333334444554443
|
|
| >PRK10301 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=81.71 E-value=23 Score=29.37 Aligned_cols=14 Identities=14% Similarity=0.271 Sum_probs=11.7
Q ss_pred CCCccEEEEecCCC
Q 046207 52 NAPEQVHITQGDHD 65 (458)
Q Consensus 52 ~~p~~v~~~~~~~~ 65 (458)
.+|.+|.|.+.++.
T Consensus 43 ~~P~~V~L~F~e~v 56 (124)
T PRK10301 43 AAPQALTLNFSEGI 56 (124)
T ss_pred cCCCEEEEEcCCCc
Confidence 47999999998765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 458 | ||||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-162 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-162 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-162 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 1e-156 |
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 458 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-155 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-153 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 3e-31 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 5e-24 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 9e-09 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 4e-08 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 6e-08 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 3e-05 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 5e-05 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 6e-05 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 2e-04 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 4e-04 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 9e-04 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 445 bits (1146), Expect = e-155
Identities = 274/421 (65%), Positives = 333/421 (79%), Gaps = 3/421 (0%)
Query: 39 DMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHK 96
DMPL + F PPG+NAP+QVHITQGD GR++I+SWVT DE + V +W + RK
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 97 THSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYI 156
+ TYR+FNYSSG+IHH TI++LKY+TKY+Y++G N TRRF F TPP+ G DVPY
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYT 121
Query: 157 FGIIGDLGQTYDSNQTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS 215
FG+IGDLGQ++DSN T HY + KGQ VLFVGDLSYAD +P HDN RWD+WGRF E+S
Sbjct: 122 FGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS 181
Query: 216 TAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIV 275
AYQ WIW GNHE+++APEI E PFKP+++RYHVPY ASQSTSP WYSIKRASA+IIV
Sbjct: 182 VAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIV 241
Query: 276 LSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFES 335
LSSYSAYG+ TPQY WL+KEL KV R+ETPWLIVL+HSP YNS ++H+MEGE+MR FE+
Sbjct: 242 LSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEA 301
Query: 336 WFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLA 395
WFV++KVD+V AGHVH+YER+ R SN+ Y ITNG+ TPVKD SAPVY+TIGD GN +
Sbjct: 302 WFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVID 361
Query: 396 DRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPEE 455
+PQP YSA+REASFGH M +IKNRTHAHF+W+RN D AV ADS W FNR+WYP +
Sbjct: 362 SNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVD 421
Query: 456 E 456
+
Sbjct: 422 D 422
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 439 bits (1131), Expect = e-153
Identities = 270/422 (63%), Positives = 324/422 (76%), Gaps = 4/422 (0%)
Query: 34 AEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTP-DEKYPNVVTHWEAN 90
VDMP + F P G+NAP+QVHITQGD++GR VI+SW TP D+ N V +W N
Sbjct: 3 NAEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSEN 62
Query: 91 SKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVG 150
SK + + + TY+Y+NY+S +IHH TIK L+YDTKY+Y+LG G+A R+F F TPPK G
Sbjct: 63 SKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPG 122
Query: 151 PDVPYIFGIIGDLGQTYDSNQTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWG 209
PDVPY+FG+IGD+GQT+DSN T HY N KGQAVLF+GDLSY++ P HDN RWD+WG
Sbjct: 123 PDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWG 182
Query: 210 RFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRA 269
RF E+S AYQ WIW GNHE+DYAP+IGE PF P+T+RY P+ AS S PLWY+IKRA
Sbjct: 183 RFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRA 242
Query: 270 SAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESM 329
SA+IIVLSSYS + KY+PQY W EL KVNR+ETPWLIVL+H+P YNS HYMEGE+M
Sbjct: 243 SAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAM 302
Query: 330 RVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGG 389
R FE +FV +KVD+V +GHVHSYER+ R SNV YNI N TPV D SAPVY+TIGDGG
Sbjct: 303 RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362
Query: 390 NIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNR 449
N EGLA T+PQPSYSA+REASFGH + +IKNRTHAHF+WHRN D +V ADS WL NR
Sbjct: 363 NSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422
Query: 450 YW 451
YW
Sbjct: 423 YW 424
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 3e-31
Identities = 47/312 (15%), Positives = 94/312 (30%), Gaps = 57/312 (18%)
Query: 151 PDVPYIFGIIGDLGQTYDSNQT----------FEHYVSNPKGQAVLFVGDLSYADDHPQH 200
P F +GD G ++ V +L +GD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62
Query: 201 DNRRWDSW--GRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQS 258
++R+ F + S W + GNH D+ + + + + R++ P +
Sbjct: 63 KDKRFQETFEDVFSDPSLRNVPWHVLAGNH--DHLGNVSAQIAYSKISKRWNFPSPYYRL 120
Query: 259 TSPLWYSIKRASAY-----IIVLSSYSAYGKYTP----------QYAWLEKELPKVNRAE 303
+ S + + + +S + Q AW++K+L A+
Sbjct: 121 RFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQL---AAAK 177
Query: 304 TPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQ 363
+++V H P + S + H + HKV + GH H+ +
Sbjct: 178 EDYVLVAGHYPVW-SIAEHGPTHC-LVKQLLPLLTTHKVTAYLCGHDHNLQYLQ------ 229
Query: 364 YNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPS----YSAYREASFGHAMLE 419
D + ++ G G ++ + + + G A +E
Sbjct: 230 ------------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE 277
Query: 420 IKNRTHAHFTWH 431
I T+
Sbjct: 278 I-TPKEMSVTYI 288
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 5e-24
Identities = 42/323 (13%), Positives = 94/323 (29%), Gaps = 67/323 (20%)
Query: 154 PYIFGIIGDLGQTYDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWG 209
F +GD G+ + F+ ++ N + ++ G D ++ W +
Sbjct: 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFI-DGVKGLNDPAWKNLY 61
Query: 210 RFVEKSTAYQAWI---WVPGNHELDYAPEI-----------------GENVPFKPYTHRY 249
V ++ V G + E ++
Sbjct: 62 EDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKW 121
Query: 250 HVP---------YRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTP------QYAWLEK 294
+P + S S + K +A I + ++ + + L+
Sbjct: 122 IMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKS 181
Query: 295 ELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354
+L V + ++IV+ P Y+S + +VDL ++GH ++ E
Sbjct: 182 QL-SVAKKIADFIIVVGDQPIYSSGYSRGSSY--LAYYLLPLLKDAEVDLYISGHDNNME 238
Query: 355 RTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFG 414
+ ++T G G +G + + S S + + G
Sbjct: 239 VIE-------------------DNDMAHITCGSGSMSQGKSG----MKNSKSLFFSSDIG 275
Query: 415 HAMLEIKNRTHAHFTWHRNHDNE 437
+ E+ + + + E
Sbjct: 276 FCVHEL-SNNGIVTKFVSSKKGE 297
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 9e-09
Identities = 45/218 (20%), Positives = 70/218 (32%), Gaps = 38/218 (17%)
Query: 184 AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA-----WIWVPGNHELDYAPEIGE 238
A++F GDL AD ++ + + A +WV GNH D E+ +
Sbjct: 69 AIVFTGDL--ADKG------EPAAYRKLRGLVEPFAAQLGAELVWVMGNH--DDRAELRK 118
Query: 239 NVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSY---SAYGKYTP-QYAWLEK 294
+ + S +PL IIVL + +G+ Q WL +
Sbjct: 119 FLL------------DEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAE 166
Query: 295 ELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMR--VAFESWFVQHKVDLVVAGHVHS 352
EL I+ LH P S +R A V ++AGH+H
Sbjct: 167 EL---ATPAPDGTILALHHPPIPSVLDM-AVTVELRDQAALGRVLRGTDVRAILAGHLH- 221
Query: 353 YERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGN 390
Y F + ++ + A DG
Sbjct: 222 YSTNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQ 259
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 4e-08
Identities = 30/205 (14%), Positives = 63/205 (30%), Gaps = 31/205 (15%)
Query: 184 AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA-WIWVPGNHELDYAPEIGENVPF 242
AV+ GD+ + R + + + + +PGNH D E
Sbjct: 44 AVVVSGDI--VNCG------RPEEYQVARQILGSLNYPLYLIPGNH--DDKALFLEY--L 91
Query: 243 KPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSY---SAYGKYTP-QYAWLEKELPK 298
+P + + ++ + ++ + S ++ G T +WLE +L +
Sbjct: 92 QPLCPQLGSDAN------NMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFE 145
Query: 299 VNRAETPWLIVLLHSPWYNSNSYHYMEGESMR--VAFESWFVQHK-VDLVVAGHVHSYER 355
+ P I + H P M+ + + + + + GH H
Sbjct: 146 --GGDKPATIFMHHPPL--PLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNH-SLT 200
Query: 356 TNRFSNVQYNITNGISTPVKDPSAP 380
++ + G V A
Sbjct: 201 MTQYRQALISTLPGTVHQVPYCHAD 225
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 6e-08
Identities = 42/267 (15%), Positives = 86/267 (32%), Gaps = 46/267 (17%)
Query: 142 HFTTPPKVGPDVPYIFGIIGDLGQT-YDSNQTFEHYVSNPKGQ---AVLFVGDLSYADDH 197
H+ P + + G+ S++ + ++++ + + ++ GDL+
Sbjct: 49 HYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLT----- 103
Query: 198 PQHDNRRWDSWGRFVEKSTAYQA----WIWVPGNHEL----------DYAPEIGENVPFK 243
+N S +K T + VPGNH++ D P
Sbjct: 104 ---NNGEKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD 160
Query: 244 PYTHRYHVPYR--ASQSTSPLWYSIKRASAY-IIVLSS-----------YSAYGKYTP-Q 288
Y S L Y +S +++L + + G T
Sbjct: 161 FSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGT 220
Query: 289 YAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVA--FESWFVQHKVDLVV 346
W+++ + LI +LH + N +G ++ + +D +
Sbjct: 221 LDWIKESSALAKKNGAK-LIPVLHHNLTDHND-VIQKGYTINYNQQVIDALTEGAMDFSL 278
Query: 347 AGHVHSYERTNRFSNVQYNITNGISTP 373
+GH+H+ + S IT+ I T
Sbjct: 279 SGHIHTQNIRSAKSTDGKEITD-IVTN 304
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 3e-05
Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 18/106 (16%)
Query: 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRK-HKTHSIIKTYRYFNYSS 111
+ + + + R + ++W + P +E + + + H ++ R
Sbjct: 10 SLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVLEPR------ 63
Query: 112 GYIHHATIKRLKYDTKYFYQL------GSGNATRRFHFTTPPKVGP 151
+ +L+ DT Y ++ G G + F T P GP
Sbjct: 64 -----VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-05
Identities = 25/117 (21%), Positives = 38/117 (32%), Gaps = 24/117 (20%)
Query: 47 PPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPN------VVTHWEANSKRKHKTHSI 100
P AP+ + + + R+VIVSW P E N ++ + +
Sbjct: 7 GPTS--APKDLTVITREGKPRAVIVSWQPPLE--ANGKITAYILFYTLDKNIPIDDWIME 62
Query: 101 IKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ------LGSGNATRRFHFTTPPKVGP 151
SG I L DT Y+++ G G + F T GP
Sbjct: 63 T--------ISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 6e-05
Identities = 24/111 (21%), Positives = 34/111 (30%), Gaps = 17/111 (15%)
Query: 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPN------VVTHWEANSKRKHKTHSIIKTYRY 106
AP V + + V W K + +W+ S K I K
Sbjct: 17 APGNVRVN--VVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILT 74
Query: 107 FNYSSGYIHHATIKRLKYDTKYFYQL------GSGNATRRFHFTTPPKVGP 151
F G H + L+ + Y + G G A+ F TP GP
Sbjct: 75 FQ---GSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP 122
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 2e-04
Identities = 23/117 (19%), Positives = 37/117 (31%), Gaps = 27/117 (23%)
Query: 48 PPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPN------VVTHWEANSKRKHKTHSII 101
PG P + + SV + W P PN +TH + T ++
Sbjct: 27 VPG--PPMGILFP--EVRTTSVRLIWQPPAA--PNGIILAYQITHRLNTTTANTATVEVL 80
Query: 102 KTYRYFNYSSGYIHHATIKRLKYDTKYFYQL------GSGNATRRFHFTTPPKVGPD 152
+ T LK ++ Y +++ G G A TT + GP
Sbjct: 81 ---------APSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSGPS 128
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 4e-04
Identities = 21/214 (9%), Positives = 61/214 (28%), Gaps = 24/214 (11%)
Query: 160 IGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHP-------------------QH 200
I + + +D + ++ + ++ VG++ + ++
Sbjct: 11 IKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHEN 70
Query: 201 DNRRWDSWGRFVEKSTAYQA-WIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQST 259
++ ++ +F + VPG + D +I ++ T ++
Sbjct: 71 EHYIIETLDKFFREIGELGVKTFVVPGKN--DAPLKIFLRAAYEAETAYPNIRVLHEGFA 128
Query: 260 SPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSN 319
++ + ++E L VN + L+ + ++P
Sbjct: 129 GWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEF 188
Query: 320 SYHYMEGESMR--VAFESWFVQHKVDLVVAGHVH 351
E + ++ + GHV
Sbjct: 189 VDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* Length = 296 | Back alignment and structure |
|---|
Score = 40.3 bits (93), Expect = 9e-04
Identities = 32/222 (14%), Positives = 65/222 (29%), Gaps = 22/222 (9%)
Query: 172 TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELD 231
+ + P G +L GD + + + ++++ W + Y+ I + GNHEL
Sbjct: 70 SRTDGIQMPYGDILLHTGDFT--ELGLPSEVKKFNDW----LGNLPYEYKIVIAGNHELT 123
Query: 232 YAPEIGENVPFKPYTHRYHVPYRASQSTSPLWY-----------SIKRASAYIIVLSSYS 280
+ E ++ + Y V + + + I
Sbjct: 124 FDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTP 183
Query: 281 AYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESM--RVAFESWFV 338
+ + + L K N I++ H P + E + + +
Sbjct: 184 WFNGWGFNLPRGQSLLDKWNLIPEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQR 243
Query: 339 QHKVDLVVAGHVHSYERTNRFSNVQY---NITNGISTPVKDP 377
+ + L V G +H T Y + P P
Sbjct: 244 RVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQPTNPP 285
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 458 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.98 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.91 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.9 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.89 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.83 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.65 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.6 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.51 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.5 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.49 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.43 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.42 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.34 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.32 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.31 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.3 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.18 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.17 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.16 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.15 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.14 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.12 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.12 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.04 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.86 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.77 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.77 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.64 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.58 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.55 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.53 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.42 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.39 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.33 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.18 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.17 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.13 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.08 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.85 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.77 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.44 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.36 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.35 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.35 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 97.22 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.1 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.04 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 97.03 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 97.02 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.01 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.96 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.91 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.91 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.91 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.9 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 96.84 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.84 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.8 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.79 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.78 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.74 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.71 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 96.7 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.66 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 96.65 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.65 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.64 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 96.64 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.63 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.58 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 96.57 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.57 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.56 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.54 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 96.49 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.43 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 96.41 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 96.4 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 96.39 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.31 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.3 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.26 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.19 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 96.18 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.16 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 96.16 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.12 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.12 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.11 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.09 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 96.07 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 96.02 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.98 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.96 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.96 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.94 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 95.93 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 95.9 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 95.9 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 95.86 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.85 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 95.81 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 95.8 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 95.78 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 95.74 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.69 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 95.68 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.66 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.65 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.61 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 95.61 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.6 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 95.56 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 95.53 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 95.48 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 95.48 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 95.41 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 95.39 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 95.34 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 95.32 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 95.31 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 95.3 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 95.25 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.2 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.19 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 95.18 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.17 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 95.17 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 95.02 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 94.95 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 94.95 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 94.91 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 94.9 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 94.86 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 94.85 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 94.75 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 94.68 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 94.67 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 94.63 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 94.55 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.48 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 94.48 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.48 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.45 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.4 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 94.23 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 94.22 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 94.19 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 94.15 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 94.04 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 94.02 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 93.85 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 93.84 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 93.82 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 93.69 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 93.66 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 93.63 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 93.62 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 93.62 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 93.5 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 93.29 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 93.15 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 92.89 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 92.39 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 92.24 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 92.2 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 92.12 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 91.99 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 91.95 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 91.92 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 91.71 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 91.67 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 90.35 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 90.32 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 89.92 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 89.41 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 88.9 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 88.64 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 88.63 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 88.22 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 87.68 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 87.5 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 87.21 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 86.94 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 86.82 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 86.69 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 86.53 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 86.48 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 86.42 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 86.33 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 85.46 | |
| 2uvf_A | 608 | Exopolygalacturonase; GH28, pectin, cell WALL, hyd | 85.35 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 85.33 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 84.02 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 83.1 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 82.37 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 82.29 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 81.19 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-76 Score=604.37 Aligned_cols=417 Identities=65% Similarity=1.166 Sum_probs=363.5
Q ss_pred CCCCCCcC--CCCCCCCCCCccEEEEecCCCCCceEEEEEcC-CCCCCCeEEEEecCCCCceEEEEEEEEEEecccccce
Q 046207 37 SVDMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTP-DEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGY 113 (458)
Q Consensus 37 ~~~~~~~~--~~~~~~~~~p~~v~~~~~~~~~~~~~i~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (458)
+.|||+++ +++|++..+|+||||+++++++++|+|+|.|. +.++.++|+|++.++.+..++.|+.++|++.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
T 1xzw_A 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAF 85 (426)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCE
T ss_pred cccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCE
Confidence 56899998 88898889999999999999889999999999 7778899999999888888888888878766667899
Q ss_pred EEEEEecCCCCCCEEEEEeCCCCccceEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHhC-CCCcEEEEcCccc
Q 046207 114 IHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSN-PKGQAVLFVGDLS 192 (458)
Q Consensus 114 ~~~~~l~gL~p~t~Y~Y~v~~g~~~~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~-~~pd~vl~~GDl~ 192 (458)
+|+|+|+||+|+|+|+|||+.|..+++++|+|+|.++...++||+++||+|.......+++++.+. .+|||||++||++
T Consensus 86 ~~~v~l~gL~p~t~Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~ 165 (426)
T 1xzw_A 86 IHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLS 165 (426)
T ss_dssp EEEEEECCCCTTCEEEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCC
T ss_pred EEEEEECCCCCCCEEEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChh
Confidence 999999999999999999998766779999999988778899999999998765556778888876 3899999999999
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEE
Q 046207 193 YADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAY 272 (458)
Q Consensus 193 y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~ 272 (458)
|.++....+..+|+.|.+.++++.+.+|+++++||||+......++...+..|..+|.||.++.....+.||+|++|+++
T Consensus 166 y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~ 245 (426)
T 1xzw_A 166 YSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAH 245 (426)
T ss_dssp CGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEE
T ss_pred hcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEE
Confidence 98663322357799999999998889999999999998653322223456678888999977655566789999999999
Q ss_pred EEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccc
Q 046207 273 IIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHS 352 (458)
Q Consensus 273 fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~ 352 (458)
||+||++..+..+.+|++||+++|+++++++.+|+||++|+|+++....+..+...+++.|+++|.+++||++|+||+|.
T Consensus 246 ~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 325 (426)
T 1xzw_A 246 IIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHS 325 (426)
T ss_dssp EEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSS
T ss_pred EEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhh
Confidence 99999998777789999999999999876778999999999999876655556677899999999999999999999999
Q ss_pred cccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEE
Q 046207 353 YERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHR 432 (458)
Q Consensus 353 y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~ 432 (458)
|+|+.|++++++.+.+|.|.++.+++|++||++|+||+.++....+..++|+|++|+...|||++|+|.|++++.|+|++
T Consensus 326 ~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~ 405 (426)
T 1xzw_A 326 YERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHR 405 (426)
T ss_dssp EEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEE
T ss_pred heeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEE
Confidence 99999999998877888888888899999999999999887544676788999999999999999999999999999999
Q ss_pred cCCCceeeeeEEEEEeeecCC
Q 046207 433 NHDNEAVVADSQWLFNRYWYP 453 (458)
Q Consensus 433 ~~dg~~~~~D~~~i~~~~~~~ 453 (458)
++||+.++.|+|||.|+||.|
T Consensus 406 ~~dg~~~~~D~~~i~~~~~~~ 426 (426)
T 1xzw_A 406 NQDGASVEADSLWLLNRYWAS 426 (426)
T ss_dssp TTSCTTCCSEEEEEECSCC--
T ss_pred CCCCCEEEeEEEEEEecccCC
Confidence 999998899999999999875
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-76 Score=602.10 Aligned_cols=418 Identities=66% Similarity=1.189 Sum_probs=362.4
Q ss_pred CCCCcC--CCCCCCCCCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEE
Q 046207 39 DMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHH 116 (458)
Q Consensus 39 ~~~~~~--~~~~~~~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (458)
|||+++ +++|++..+|+||||++|++++++|+|+|.|.+.++.+.|+|++.++.+..++.|+.++|.+.++.++++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 81 (424)
T 2qfp_A 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81 (424)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEE
T ss_pred CCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEE
Confidence 789988 888988899999999999998899999999987778899999999888888888888877765567899999
Q ss_pred EEecCCCCCCEEEEEeCCCCccceEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHhCC-CCcEEEEcCccccCC
Q 046207 117 ATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYAD 195 (458)
Q Consensus 117 ~~l~gL~p~t~Y~Y~v~~g~~~~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~-~pd~vl~~GDl~y~~ 195 (458)
|+|+||+|+|+|+|||+.+..++.++|+|+|.+++..++||+++||+|.......+++++.+.. +|||||++||++|.+
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~ 161 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYAD 161 (424)
T ss_dssp EEECSCCTTCEEEEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGG
T ss_pred EEECCCCCCCEEEEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCcccccc
Confidence 9999999999999999987667799999999887778999999999998755556777777653 899999999999987
Q ss_pred CCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEE
Q 046207 196 DHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIV 275 (458)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~ 275 (458)
+....+...|+.|.+.++++.+.+|+++++||||+...+..++...+..|..+|.||..+.....+.||+|++|+++||+
T Consensus 162 ~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~ 241 (424)
T 2qfp_A 162 RYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIV 241 (424)
T ss_dssp GSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEE
T ss_pred ccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEE
Confidence 54333456899999999998888999999999998653322223356678888989976655566889999999999999
Q ss_pred ecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 276 LSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 276 Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
||+...++...+|++||+++|+++++++.+|+||++|+|+++....+..+...+++.|+++|++++||++|+||+|.|+|
T Consensus 242 Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r 321 (424)
T 2qfp_A 242 LSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYER 321 (424)
T ss_dssp CCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEE
T ss_pred ecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhhe
Confidence 99988776778999999999999866678899999999999875545445667899999999999999999999999999
Q ss_pred ccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCC
Q 046207 356 TNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHD 435 (458)
Q Consensus 356 ~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~d 435 (458)
+.|+++..+.+.+|.|.++.++++++||++|+||+.++....+..++|+|++|++..|||++|+|.|++++.|+|++++|
T Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~ 401 (424)
T 2qfp_A 322 SERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQD 401 (424)
T ss_dssp ECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTS
T ss_pred eccccCcceeccCCccccccCCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCC
Confidence 99999888777788888878899999999999999987655677788999999999999999999999999999999999
Q ss_pred CceeeeeEEEEEeeecCCCCC
Q 046207 436 NEAVVADSQWLFNRYWYPEEE 456 (458)
Q Consensus 436 g~~~~~D~~~i~~~~~~~~~~ 456 (458)
|++++.|+|||.|+||.|..+
T Consensus 402 g~~~~~D~~~i~~~~~~~~~~ 422 (424)
T 2qfp_A 402 GVAVEADSVWFFNRHWYPVDD 422 (424)
T ss_dssp CTTCCSEEEEEECTTTCCCCC
T ss_pred CCEEeeeEEEEEecccccccc
Confidence 997779999999999999643
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-40 Score=340.17 Aligned_cols=358 Identities=16% Similarity=0.190 Sum_probs=240.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC---------CCCeEEEEecCCCC--ceEEEEEEEEEEecccccceEEEEEecC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK---------YPNVVTHWEANSKR--KHKTHSIIKTYRYFNYSSGYIHHATIKR 121 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~---------~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~g 121 (458)
.|+..-++.| ||..+.+|.|++..+. ....|+|..+.+.. .....|+..+ ....+++|+|+|+|
T Consensus 7 ~~f~~GvasG-Dp~~~~vilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a----~~~~~~t~~v~v~g 81 (527)
T 2yeq_A 7 YPFTLGVASG-DPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMA----KPSLAHSVHVEADG 81 (527)
T ss_dssp CSCTTCEEEE-CCCSSCEEEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEE----CGGGTTEEEEEECS
T ss_pred CCcccccccc-CCCCCeEEEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEe----cCCCceEEEeecCC
Confidence 4556666766 4556777999987531 34577777766543 3444455443 23578999999999
Q ss_pred CCCCCEEEEEeCCC-CccceEEEECCCCCCCC-CCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCC
Q 046207 122 LKYDTKYFYQLGSG-NATRRFHFTTPPKVGPD-VPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQ 199 (458)
Q Consensus 122 L~p~t~Y~Y~v~~g-~~~~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~ 199 (458)
|+|+|+|+|||+.+ ..+++++|+|+|.++.. .+++|+++||.+.......++.++.+. +||||||+||++|++....
T Consensus 82 L~P~t~Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~-~~D~vlhlGD~iY~d~~~~ 160 (527)
T 2yeq_A 82 LEPNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKE-KLDLVFHLGDYIYEYGPNE 160 (527)
T ss_dssp CCTTCEEEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTS-CCSEEEECSCSSCCCCTTS
T ss_pred cCCCCEEEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhc-CCCEEEecCCcccCCCCCc
Confidence 99999999999874 45679999999987654 789999999998754556788888886 9999999999999986321
Q ss_pred --------------------CchhHHHHHH--HHHHHHhhccceEEccCCcccCCCCCCCCccc------C-----cccc
Q 046207 200 --------------------HDNRRWDSWG--RFVEKSTAYQAWIWVPGNHELDYAPEIGENVP------F-----KPYT 246 (458)
Q Consensus 200 --------------------~~~~~~~~~~--~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~------~-----~~~~ 246 (458)
++..+|..+. ..++.+.+.+||++++||||+..+...+.... | .++.
T Consensus 161 ~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ 240 (527)
T 2yeq_A 161 YVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQ 240 (527)
T ss_dssp SCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHH
Confidence 0122333322 34677778899999999999965421110000 0 1233
Q ss_pred eee-ccccCCC----CCCCCceEEEEcCe-EEEEEecCCCcCC----------------------CChHHHHHHHHHhcc
Q 046207 247 HRY-HVPYRAS----QSTSPLWYSIKRAS-AYIIVLSSYSAYG----------------------KYTPQYAWLEKELPK 298 (458)
Q Consensus 247 ~~f-~~P~~~~----~~~~~~~ys~~~g~-~~fi~Lds~~~~~----------------------~~~~Q~~WL~~~L~~ 298 (458)
.+| .||.... +.....||+|++|+ ++||+||+..... .+.+|++||+++|++
T Consensus 241 ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~ 320 (527)
T 2yeq_A 241 AYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS 320 (527)
T ss_dssp HHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc
Confidence 333 2554321 12346899999999 9999999975311 258999999999998
Q ss_pred ccCCCCCeEEEEeccccccCCCC----------CCccchHHHHHHHHHHHHcCcc--EEEeccccccccccccccceeee
Q 046207 299 VNRAETPWLIVLLHSPWYNSNSY----------HYMEGESMRVAFESWFVQHKVD--LVVAGHVHSYERTNRFSNVQYNI 366 (458)
Q Consensus 299 ~~~~~~~~~Iv~~H~P~~~~~~~----------~~~~~~~~~~~l~~ll~~~~Vd--lvl~GH~H~y~r~~~~~~~~~~~ 366 (458)
++++|+||+.|+|++..... ........|+.|.++|.+++|+ +||+||+|.+++.......
T Consensus 321 ---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~---- 393 (527)
T 2yeq_A 321 ---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDF---- 393 (527)
T ss_dssp ---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESST----
T ss_pred ---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccc----
Confidence 67899999999999865321 1111356799999999999985 9999999999997522110
Q ss_pred cCCcccccCCCC----CCeEEEeC----CCCCCCCC-CCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEc
Q 046207 367 TNGISTPVKDPS----APVYLTIG----DGGNIEGL-ADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRN 433 (458)
Q Consensus 367 ~~g~~~~~~~~~----g~~yiv~G----~gG~~~~~-~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 433 (458)
.++. ++-++++| +.|..... ...+...+| ...|.+...||++|+|. .+.++.+|+..
T Consensus 394 --------~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np-~~~~~~~~~Gy~~v~vt-~~~~~~~~~~v 459 (527)
T 2yeq_A 394 --------EKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENP-HIQFFNDYRGYVRCTVT-PHQWKADYRVM 459 (527)
T ss_dssp --------TCTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCT-TEEEEEBCEEEEEEEEE-TTEEEEEEEEE
T ss_pred --------cCCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCC-cceeeeCCCCEEEEEEe-ccEEEEEEEEe
Confidence 1122 22333222 21211000 000111234 34566678999999995 45688888754
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=304.70 Aligned_cols=255 Identities=15% Similarity=0.228 Sum_probs=186.7
Q ss_pred CCeEEEEEecCCCCCCcHH----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHH-HHHHHHHH--hhccceEEcc
Q 046207 153 VPYIFGIIGDLGQTYDSNQ----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDS-WGRFVEKS--TAYQAWIWVP 225 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~~~----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~-~~~~~~~l--~~~~P~~~v~ 225 (458)
.+++|+++||+|.+...+. .+.++++..+|||||++||++|. +..+..+.+|.. |.+.++.+ ...+||++|+
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vl 80 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVL 80 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeC
Confidence 4699999999997654333 23344444599999999999998 433334556654 33444333 3478999999
Q ss_pred CCcccCCCCCCCC-----------------cccCcccceeeccccCCCCCCCCceEEE----Ec---------C----eE
Q 046207 226 GNHELDYAPEIGE-----------------NVPFKPYTHRYHVPYRASQSTSPLWYSI----KR---------A----SA 271 (458)
Q Consensus 226 GNHD~~~~~~~~~-----------------~~~~~~~~~~f~~P~~~~~~~~~~~ys~----~~---------g----~~ 271 (458)
||||+.......- .........||.||. .||++ .. | .+
T Consensus 81 GNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~v 152 (342)
T 3tgh_A 81 GTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLAA 152 (342)
T ss_dssp CHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEEE
T ss_pred CCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCceE
Confidence 9999864321000 000123457788884 47765 22 3 49
Q ss_pred EEEEecCCCcCCC----------ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcC
Q 046207 272 YIIVLSSYSAYGK----------YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHK 341 (458)
Q Consensus 272 ~fi~Lds~~~~~~----------~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (458)
+||+|||...... ..+|++||+++|++ ++|+||++|||+++.... ++...+++.|.++|++++
T Consensus 153 ~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~~~~ 225 (342)
T 3tgh_A 153 AFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLKDAE 225 (342)
T ss_dssp EEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHHHTT
T ss_pred EEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHHHcC
Confidence 9999999753211 25899999999943 479999999999987642 334677899999999999
Q ss_pred ccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEe
Q 046207 342 VDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIK 421 (458)
Q Consensus 342 Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~ 421 (458)
|+++|+||+|.|+|.. .+|+.||++|+||..... .. ..++|+.|+...+||+++++.
T Consensus 226 VdlvlsGH~H~~~~~~-------------------~~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l~v~ 282 (342)
T 3tgh_A 226 VDLYISGHDNNMEVIE-------------------DNDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVHELS 282 (342)
T ss_dssp CCEEEECSSSSEEEEE-------------------ETTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEEEEE
T ss_pred CCEEEECCCcceeEEe-------------------eCCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEEEEE
Confidence 9999999999999975 346899999999986531 11 235589999999999999995
Q ss_pred cCceEEEEEEEcCCCceeeeeEEEEEee
Q 046207 422 NRTHAHFTWHRNHDNEAVVADSQWLFNR 449 (458)
Q Consensus 422 ~~~~~~~~~~~~~dg~~~~~D~~~i~~~ 449 (458)
++.++++|+.+.+|+ ++|+|+|.|+
T Consensus 283 -~~~l~~~~~~~~~G~--vld~~~i~k~ 307 (342)
T 3tgh_A 283 -NNGIVTKFVSSKKGE--VIYTHKLNIK 307 (342)
T ss_dssp -TTEEEEEEEETTTTE--EEEEEEEECC
T ss_pred -CCEEEEEEEECCCCc--EEEEEEEECC
Confidence 567999999768999 8999999986
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.1e-32 Score=263.14 Aligned_cols=260 Identities=17% Similarity=0.273 Sum_probs=174.8
Q ss_pred CCeEEEEEecCCCCCCc----------HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHH-HHHHHHHhh-ccc
Q 046207 153 VPYIFGIIGDLGQTYDS----------NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSW-GRFVEKSTA-YQA 220 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~----------~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~l~~-~~P 220 (458)
.++||+++||+|..... .+.+.++++..+||+||++||++|..+.......+|... .+.++.... .+|
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p 84 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 84 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCC
Confidence 57999999999986421 223344333348999999999999865332223333322 222221112 689
Q ss_pred eEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEc------CeEEEEEecCCCcC------------
Q 046207 221 WIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKR------ASAYIIVLSSYSAY------------ 282 (458)
Q Consensus 221 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~------g~~~fi~Lds~~~~------------ 282 (458)
+++++||||+..... ....+.....+|.+| ..||++.+ ++++||+||+....
T Consensus 85 ~~~v~GNHD~~~~~~--~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~ 154 (313)
T 1ute_A 85 WHVLAGNHDHLGNVS--AQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPE 154 (313)
T ss_dssp EEECCCHHHHHSCHH--HHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCC
T ss_pred EEEECCCCccCCCcc--ccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccC
Confidence 999999999742110 001122223344444 35888877 48999999986521
Q ss_pred -----CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 283 -----GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 283 -----~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
....+|++||++.|++. +.+|+||++|+|++..... .....+++.|.++|.+++|+++|+||+|.+++..
T Consensus 155 ~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~ 229 (313)
T 1ute_A 155 RPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ 229 (313)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEE
T ss_pred CccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhhhhcc
Confidence 01378999999999984 4589999999999876542 1234567889999999999999999999998864
Q ss_pred ccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeC----ceeEEEEEEecCceEEEEEEEc
Q 046207 358 RFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREA----SFGHAMLEIKNRTHAHFTWHRN 433 (458)
Q Consensus 358 ~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~----~~Gf~~l~v~~~~~~~~~~~~~ 433 (458)
..+|+.||++|++|.............+++..|... .+||++|+|. ++.++++|+.
T Consensus 230 ------------------~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~-~~~~~~~~~~- 289 (313)
T 1ute_A 230 ------------------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEIT-PKEMSVTYIE- 289 (313)
T ss_dssp ------------------CTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEEC-SSCEEEEEEE-
T ss_pred ------------------CCCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEE-cCEEEEEEEc-
Confidence 145789999999987543111000001124445432 3899999995 5568999886
Q ss_pred CCCceeeeeEEEEEee
Q 046207 434 HDNEAVVADSQWLFNR 449 (458)
Q Consensus 434 ~dg~~~~~D~~~i~~~ 449 (458)
.+|+ ++|+++|.|+
T Consensus 290 ~~g~--~~~~~~l~~~ 303 (313)
T 1ute_A 290 ASGK--SLFKTKLPRR 303 (313)
T ss_dssp TTSC--EEEEEEECCC
T ss_pred CCCc--EEEEEEeccc
Confidence 4888 8999999886
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=205.64 Aligned_cols=239 Identities=19% Similarity=0.170 Sum_probs=159.4
Q ss_pred CCCCeEEEEEecCCCCCC---------cHH----HHHHHHh-CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh
Q 046207 151 PDVPYIFGIIGDLGQTYD---------SNQ----TFEHYVS-NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST 216 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~---------~~~----~l~~~~~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~ 216 (458)
...++||+++||+|.... ... .++.+.+ ..++|+||++||+++.+. ...++.+.+.++.+.
T Consensus 22 ~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~l~ 96 (330)
T 3ib7_A 22 PRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-----PAAYRKLRGLVEPFA 96 (330)
T ss_dssp CCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC-----HHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHHHH
Confidence 346899999999997421 122 3444444 138999999999998764 456666777777664
Q ss_pred h--ccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC----CCChHHHH
Q 046207 217 A--YQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY----GKYTPQYA 290 (458)
Q Consensus 217 ~--~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~----~~~~~Q~~ 290 (458)
. .+|+++++||||+. .. +...+.-. .......+|+++.++++||+||+.... ....+|++
T Consensus 97 ~~~~~pv~~v~GNHD~~--------~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~ 162 (330)
T 3ib7_A 97 AQLGAELVWVMGNHDDR--------AE---LRKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 162 (330)
T ss_dssp HHHTCEEEECCCTTSCH--------HH---HHHHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHH
T ss_pred hhcCCCEEEeCCCCCCH--------HH---HHHHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHH
Confidence 3 68999999999962 11 11111100 111235689999999999999997631 23589999
Q ss_pred HHHHHhccccCCCCCeEEEEeccccccCCCCCC-ccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCC
Q 046207 291 WLEKELPKVNRAETPWLIVLLHSPWYNSNSYHY-MEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNG 369 (458)
Q Consensus 291 WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g 369 (458)
||++.|++.. ...+|+++|||++....... ......++.+.+++++++++++|+||+|..+...
T Consensus 163 wl~~~l~~~~---~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~------------ 227 (330)
T 3ib7_A 163 WLAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT------------ 227 (330)
T ss_dssp HHHHHTTSCC---TTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE------------
T ss_pred HHHHHHHhcc---cCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce------------
Confidence 9999999853 33478899999876432111 0112235788899999999999999999987532
Q ss_pred cccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCC
Q 046207 370 ISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDN 436 (458)
Q Consensus 370 ~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg 436 (458)
.+|+.++++|+.+..... ..+. ..........||..|++.++ .+.++++.-.++
T Consensus 228 -------~~g~~~~~~gs~~~~~~~----~~~~-g~~~~~~~~~gy~iv~i~~~-~~~~~~v~~~~~ 281 (330)
T 3ib7_A 228 -------FVGIPVSVASATCYTQDL----TVAA-GGTRGRDGAQGCNLVHVYPD-TVVHSVIPLGGG 281 (330)
T ss_dssp -------ETTEEEEECCCSSCEECT----TSCT-TCCCEESCSCEEEEEEECSS-CEEEEEEECSCC
T ss_pred -------ECCEEEEecCcceeccCC----CCCC-cceeccCCCCceEEEEEECC-CeEEEEeccCCC
Confidence 246678888887754321 1011 11122334579999999654 477888864433
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.9e-23 Score=195.53 Aligned_cols=231 Identities=13% Similarity=0.095 Sum_probs=149.4
Q ss_pred eEEEEEecCCCCC---------CcHHHH----HHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 155 YIFGIIGDLGQTY---------DSNQTF----EHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 155 ~~f~~~gD~~~~~---------~~~~~l----~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
+||+++||+|... .....+ +.+.+. .++|+||++||+++.+. ...|+.+.+.++.+ .+|
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~l--~~p 73 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-----PEEYQVARQILGSL--NYP 73 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-----HHHHHHHHHHHTTC--SSC
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHhc--CCC
Confidence 5899999999874 112333 334443 26899999999998654 44565566666554 579
Q ss_pred eEEccCCcccCCCCCCCCcccCc-ccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC----CCChHHHHHHHHH
Q 046207 221 WIWVPGNHELDYAPEIGENVPFK-PYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY----GKYTPQYAWLEKE 295 (458)
Q Consensus 221 ~~~v~GNHD~~~~~~~~~~~~~~-~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~----~~~~~Q~~WL~~~ 295 (458)
+++++||||... .+. .+...| ++.... .+..+|+++.++++|++||+.... ....+|++||++.
T Consensus 74 ~~~v~GNHD~~~--------~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~ 142 (274)
T 3d03_A 74 LYLIPGNHDDKA--------LFLEYLQPLC-PQLGSD--ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (274)
T ss_dssp EEEECCTTSCHH--------HHHHHHGGGS-GGGCSC--GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred EEEECCCCCCHH--------HHHHHhhhhh-cCcccC--CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHH
Confidence 999999999631 111 111111 111100 023578999999999999997532 2358999999999
Q ss_pred hccccCCCCCeEEEEeccccccCCCCCC-ccchHHHHHHHHHHHHc-CccEEEeccccccccccccccceeeecCCcccc
Q 046207 296 LPKVNRAETPWLIVLLHSPWYNSNSYHY-MEGESMRVAFESWFVQH-KVDLVVAGHVHSYERTNRFSNVQYNITNGISTP 373 (458)
Q Consensus 296 L~~~~~~~~~~~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~ 373 (458)
|++. +.+++|+++|+|++....... .......+.+.++++++ +|+++|+||+|..+...
T Consensus 143 l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~---------------- 203 (274)
T 3d03_A 143 LFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ---------------- 203 (274)
T ss_dssp HHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE----------------
T ss_pred HHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe----------------
Confidence 9984 346799999999986542211 01122356788999998 89999999999987642
Q ss_pred cCCCCCCeEEEeCC-CCCCCCCCCCCCCCCCCC-cceeeCceeEEEEEEecCceEEEEEEEc
Q 046207 374 VKDPSAPVYLTIGD-GGNIEGLADRYTEPQPSY-SAYREASFGHAMLEIKNRTHAHFTWHRN 433 (458)
Q Consensus 374 ~~~~~g~~yiv~G~-gG~~~~~~~~~~~~~p~~-s~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 433 (458)
.+|+.++++++ ++.... . .+.+ +.+.....||..+++.++ .+++++++.
T Consensus 204 ---~~g~~~~~~pg~~~~~~~-----~--~~~~~~~~~~~~~gy~i~~i~~~-~~~~~~~~~ 254 (274)
T 3d03_A 204 ---YRQALISTLPGTVHQVPY-----C--HADTDPYYDLSPASCLMHRQVGE-QWVSYQHSL 254 (274)
T ss_dssp ---ETTEEEEECCCSSCBCCC-----C--SSCCSCEEBCCCCEEEEEEEETT-EEEEEEEEC
T ss_pred ---ECCEEEEEcCCcceeecc-----C--CCccccccccCCCceEEEEEeCC-cEEEEEEec
Confidence 12444555544 333221 1 1111 233445689999999665 578888764
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=196.97 Aligned_cols=227 Identities=18% Similarity=0.166 Sum_probs=145.5
Q ss_pred CCCeEEEEEecCCCCCCc----------------HHHH----HHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHH
Q 046207 152 DVPYIFGIIGDLGQTYDS----------------NQTF----EHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRF 211 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~----------------~~~l----~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~ 211 (458)
...+||+++||+|..... ...+ +.+.+. +||+||++||+++.+... ....++.+...
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~d~vi~~GD~~~~~~~~--~~~~~~~~~~~ 79 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRE-RVQCVVQLGDIIDGHNRR--RDASDRALDTV 79 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBCTHHHH--TTCHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhc-CCCEEEECCCccCCCCCc--chHHHHHHHHH
Confidence 357999999999987521 1223 333343 899999999999864300 00113344444
Q ss_pred HHHHhh-ccceEEccCCcccCCCCCCCCcccCcccceeec-------------cccCCCCCCCCceEEEEc-CeEEEEEe
Q 046207 212 VEKSTA-YQAWIWVPGNHELDYAPEIGENVPFKPYTHRYH-------------VPYRASQSTSPLWYSIKR-ASAYIIVL 276 (458)
Q Consensus 212 ~~~l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~-------------~P~~~~~~~~~~~ys~~~-g~~~fi~L 276 (458)
++.+.. .+|+++++||||+.... . ..+...+. +|. .+..||+|+. ++++||+|
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~l 147 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFYNFS----R---PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLL 147 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHHHCC----H---HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEEC
T ss_pred HHHHHhcCCcEEEecCCCCcccCC----H---HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEE
Confidence 444332 67999999999973110 0 01111111 221 1356899998 89999999
Q ss_pred cCCCc-------------------------C---------------------CCChHHHHHHHHHhccccCCCCCeEEEE
Q 046207 277 SSYSA-------------------------Y---------------------GKYTPQYAWLEKELPKVNRAETPWLIVL 310 (458)
Q Consensus 277 ds~~~-------------------------~---------------------~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~ 310 (458)
|+... + ....+|++||+++|+++.+. .+++||+
T Consensus 148 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~ 226 (322)
T 2nxf_A 148 DAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIF 226 (322)
T ss_dssp CTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred cCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence 98642 0 01378999999999986421 3568999
Q ss_pred eccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCC
Q 046207 311 LHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGG 389 (458)
Q Consensus 311 ~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG 389 (458)
+|+|++....... .....++.+.+++.++ +|+++|+||+|.+++.. +.+|+.|+++|+.-
T Consensus 227 ~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~------------------~~~g~~~i~~~~~~ 287 (322)
T 2nxf_A 227 SHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT------------------DSSGAQHITLEGVI 287 (322)
T ss_dssp ESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE------------------CTTSCEEEECCCGG
T ss_pred EccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCcee------------------ccCCceEEEecchh
Confidence 9999986543210 1111357888999999 79999999999998753 13467788777552
Q ss_pred CCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEE
Q 046207 390 NIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWH 431 (458)
Q Consensus 390 ~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~ 431 (458)
.. + ....||..+++.+ ..+.++.+
T Consensus 288 ~~-----------~------~~~~~y~~v~~~~-~~~~~~~~ 311 (322)
T 2nxf_A 288 ET-----------P------PHSHAFATAYLYE-DRMVMKGR 311 (322)
T ss_dssp GC-----------C------TTSCEEEEEEECS-SEEEEEEE
T ss_pred hC-----------C------CCCCcEEEEEEEC-CeEEEEec
Confidence 10 0 1235899999965 45666644
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-19 Score=181.63 Aligned_cols=199 Identities=14% Similarity=0.197 Sum_probs=125.6
Q ss_pred CCCCeEEEEEecCCCCCC-----------------------cHHHHHHH----HhCCCCcEEEEcCccccCCCCCCCchh
Q 046207 151 PDVPYIFGIIGDLGQTYD-----------------------SNQTFEHY----VSNPKGQAVLFVGDLSYADDHPQHDNR 203 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~-----------------------~~~~l~~~----~~~~~pd~vl~~GDl~y~~~~~~~~~~ 203 (458)
.+.++||++++|+|.... ....++++ .+. +||+||++||+++.+. ..
T Consensus 36 ~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~d~vi~~GDl~~~~~-----~~ 109 (443)
T 2xmo_A 36 KDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESK-KTDVLIISGDLTNNGE-----KT 109 (443)
T ss_dssp SCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHH-TCSEEEEESCCBSSCC-----HH
T ss_pred CCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHc-CCCEEEECCCCCCCCC-----HH
Confidence 446899999999997532 12333433 233 8999999999998764 34
Q ss_pred HHHHHHHHHHHHhh-ccceEEccCCcccCCCCCCC--Cc-------ccCcccceeeccccCCC----CCCCCceEEEEcC
Q 046207 204 RWDSWGRFVEKSTA-YQAWIWVPGNHELDYAPEIG--EN-------VPFKPYTHRYHVPYRAS----QSTSPLWYSIKRA 269 (458)
Q Consensus 204 ~~~~~~~~~~~l~~-~~P~~~v~GNHD~~~~~~~~--~~-------~~~~~~~~~f~~P~~~~----~~~~~~~ys~~~g 269 (458)
.++.+.+.++.+.. .+|+++++||||+....... .. .....|...|.-..... ......|+.+..+
T Consensus 110 ~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 189 (443)
T 2xmo_A 110 SHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSS 189 (443)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBS
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCC
Confidence 55666666666643 68999999999985321100 00 00011111111000000 0011234444578
Q ss_pred eEEEEEecCCCcC------------CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCC-ccchHHHHHHHHH
Q 046207 270 SAYIIVLSSYSAY------------GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHY-MEGESMRVAFESW 336 (458)
Q Consensus 270 ~~~fi~Lds~~~~------------~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l 336 (458)
+++||+||+.... ....+|++||++.|+++.+ ....+|+++|+|++....... ......++.+.++
T Consensus 190 ~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~l 268 (443)
T 2xmo_A 190 KVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDA 268 (443)
T ss_dssp SEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHH
T ss_pred CEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccccccHHHHHHH
Confidence 9999999997531 1357999999999988643 235689999999976532111 1112346788899
Q ss_pred HHHcCccEEEeccccccccc
Q 046207 337 FVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 337 l~~~~Vdlvl~GH~H~y~r~ 356 (458)
+++++|+++|+||+|.....
T Consensus 269 l~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 269 LTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHHTTCCEEEECSSCSCEEE
T ss_pred HHHcCCeEEEECCcccCchh
Confidence 99999999999999997654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-16 Score=145.40 Aligned_cols=170 Identities=12% Similarity=0.048 Sum_probs=97.1
Q ss_pred CeEEEEEecCCCCCCcHHH-HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 154 PYIFGIIGDLGQTYDSNQT-FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~-l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
.+||+++||+|......+. ++.+.+. ++|+||++||+++.+. ....+..+.+.++.+ ..|+++++||||...
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~-~~D~vi~~GDl~~~~~----~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDT-GADAIALIGNLMPKAA----KSRDYAAFFRILSEA--HLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHH-TCSEEEEESCSSCTTC----CHHHHHHHHHHHGGG--CSCEEEECCTTSCSH
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhc-CCCEEEECCCCCCCCC----CHHHHHHHHHHHHhc--CCcEEEECCCCCchh
Confidence 5899999999976322222 2222333 8999999999998763 233333344444332 579999999999631
Q ss_pred CCCCCCcccCcccceeec----cccCCCCCCCCceEEEEcC-eEEEEEecCCCc--CCCChH--------HHHHHHHHhc
Q 046207 233 APEIGENVPFKPYTHRYH----VPYRASQSTSPLWYSIKRA-SAYIIVLSSYSA--YGKYTP--------QYAWLEKELP 297 (458)
Q Consensus 233 ~~~~~~~~~~~~~~~~f~----~P~~~~~~~~~~~ys~~~g-~~~fi~Lds~~~--~~~~~~--------Q~~WL~~~L~ 297 (458)
. ......+. .|... ...+. .+.++ ++.|++++.... +....+ +.+|+++.|+
T Consensus 78 ~---------~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 144 (228)
T 1uf3_A 78 W---------EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALW 144 (228)
T ss_dssp H---------HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGG
T ss_pred H---------HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHH
Confidence 0 00111100 01000 00011 23345 788998875321 111122 2344556666
Q ss_pred cccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccc
Q 046207 298 KVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVH 351 (458)
Q Consensus 298 ~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H 351 (458)
+.. ..+.|+++|+|++....... + .+.+.+++++++++++++||+|
T Consensus 145 ~~~---~~~~il~~H~p~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 145 ELK---DYPKIFLFHTMPYHKGLNEQ--G---SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp GSC---SCCEEEEESSCBCBTTTBTT--S---BHHHHHHHHHHCCSEEEECCSS
T ss_pred hCC---CCCeEEEEccCcccCCcccc--C---HHHHHHHHHHhCCCEEEEcccc
Confidence 532 24689999999976421111 1 2356677888999999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.1e-15 Score=141.01 Aligned_cols=180 Identities=11% Similarity=0.070 Sum_probs=99.1
Q ss_pred CeEEEEEecCCCCCCcHH-HHHHHHhCCCCcEEEEcCccccCCCCCCCchh---------------HH--------HHHH
Q 046207 154 PYIFGIIGDLGQTYDSNQ-TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNR---------------RW--------DSWG 209 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~-~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~---------------~~--------~~~~ 209 (458)
++||+++||+|....... .++.+.+. ++|+||++||+++.+. ... .+ +.+.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~-~~D~vi~~GDl~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 79 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEK-QPDILVVVGNILKNEA----LEKEYERAHLARREPNRKVIHENEHYIIETLD 79 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHH-CCSEEEEESCCCCCHH----HHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhc-CCCEEEECCCCCCccC----cchhhhhhhhhhcccchhhhhHHHHHHHHHHH
Confidence 589999999998754333 33344334 8999999999997643 100 00 2234
Q ss_pred HHHHHHhh-ccceEEccCCcccCCCCCCCCcccCcccceeec-cccCCCCCCCCceEEEEcCeEEEEEecCCCcCC-CCh
Q 046207 210 RFVEKSTA-YQAWIWVPGNHELDYAPEIGENVPFKPYTHRYH-VPYRASQSTSPLWYSIKRASAYIIVLSSYSAYG-KYT 286 (458)
Q Consensus 210 ~~~~~l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~-~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~-~~~ 286 (458)
+.++.+.. ..|+++++||||.... ..+........ .|.. ... .....+.+++++|++++...... ...
T Consensus 80 ~~l~~l~~~~~pv~~v~GNHD~~~~------~~~~~~~~~~~~~~~~--~~l-~~~~~~~~~~~~i~g~~~~~~~~~~~~ 150 (260)
T 2yvt_A 80 KFFREIGELGVKTFVVPGKNDAPLK------IFLRAAYEAETAYPNI--RVL-HEGFAGWRGEFEVIGFGGLLTEHEFEE 150 (260)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCCHH------HHHHHHHHTTTTCTTE--EEC-SSEEEEETTTEEEEEECSEEESSCCBS
T ss_pred HHHHHHHhcCCcEEEEcCCCCchhh------hhHHHHhhhccCCcce--EEe-cCcceEEECCEEEEecCCCcCCCCcCH
Confidence 44555543 5799999999996310 00000000000 0000 000 11123677889999998532110 111
Q ss_pred HHH---------HHHHHHhccccCCCCCeEEEEeccccccCCCCCC--ccchHHHHHHHHHHHHcCccEEEecccc
Q 046207 287 PQY---------AWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHY--MEGESMRVAFESWFVQHKVDLVVAGHVH 351 (458)
Q Consensus 287 ~Q~---------~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~--~~~~~~~~~l~~ll~~~~Vdlvl~GH~H 351 (458)
+++ +|| +.|++. .....|+++|+|++....... .......+.+.+++.+++++++++||+|
T Consensus 151 ~~~~~~~~~~~~~~l-~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 151 DFVLKYPRWYVEYIL-KFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp SSSCEEEHHHHHHHG-GGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred HHHhhcchhhHHHHH-HHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 222 344 444442 223569999999875311100 0001112466778888999999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-14 Score=141.71 Aligned_cols=236 Identities=14% Similarity=0.166 Sum_probs=121.2
Q ss_pred CCCeEEEEEecCCCC----CC--c-------HHHHHHHHh---CCCCcEEEEcCc-cccCCCCCCCchhHHHHHHHHHHH
Q 046207 152 DVPYIFGIIGDLGQT----YD--S-------NQTFEHYVS---NPKGQAVLFVGD-LSYADDHPQHDNRRWDSWGRFVEK 214 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~----~~--~-------~~~l~~~~~---~~~pd~vl~~GD-l~y~~~~~~~~~~~~~~~~~~~~~ 214 (458)
...+||+++||+|.+ .. . ...++++++ ..++|+||++|| +++... + .......+.+.++.
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~-~--~~~~~~~~~~~l~~ 92 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNN-P--SVVALHDLLDYLKR 92 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSC-C--CHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCC-C--CHHHHHHHHHHHHH
Confidence 357999999999976 21 1 233444332 228999999999 776543 1 12223445566666
Q ss_pred HhhccceEEccCCcccCCCCCCCCcccCccccee----eccccCCCCCCCCceEEEEcCeEEEEEecCCCcC-------C
Q 046207 215 STAYQAWIWVPGNHELDYAPEIGENVPFKPYTHR----YHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY-------G 283 (458)
Q Consensus 215 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~----f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~-------~ 283 (458)
+...+|+++++||||... .. .+..+... +.+-.+. . ......++.+++.|++++..... .
T Consensus 93 L~~~~pv~~i~GNHD~~~---~~---~~~~~l~~~g~nv~v~~~~-~--~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~ 163 (336)
T 2q8u_A 93 MMRTAPVVVLPGNHDWKG---LK---LFGNFVTSISSDITFVMSF-E--PVDVEAKRGQKVRILPFPYPDESEALRKNEG 163 (336)
T ss_dssp HHHHSCEEECCC---------CH---HHHHHHHHHCSSEEECCSS-S--CEEEECTTSCEEEEEEECCC-------CCSS
T ss_pred HHhcCCEEEECCCCCccc---cc---cHHHHHHhcCCEEEEEecc-c--ccCceEEeCCCEEEEECCCCCHHHHHHHhhH
Confidence 643389999999999642 10 01111110 1111000 0 00011222367889988753321 1
Q ss_pred CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchH-H-HHHHHHHHHHcCccEEEecccccccccccccc
Q 046207 284 KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGES-M-RVAFESWFVQHKVDLVVAGHVHSYERTNRFSN 361 (458)
Q Consensus 284 ~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~-~-~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~ 361 (458)
...+|++|+.+.|...-..+..+.|+++|.|+....... .+. . ...+...+.+.++|++++||+|..+...
T Consensus 164 ~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~---~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~---- 236 (336)
T 2q8u_A 164 DFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA---GIEQGREIIINRALIPSVVDYAALGHIHSFREIQ---- 236 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------CCCEECGGGSCTTSSEEEEESCSSCEEEE----
T ss_pred HHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC---CccchhhcccCHHHccccCCEEEEccccCceEeC----
Confidence 124678898888765210134579999999987532110 000 0 0001112334689999999999987642
Q ss_pred ceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCC
Q 046207 362 VQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHD 435 (458)
Q Consensus 362 ~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~d 435 (458)
.++..+.+|+.... .+.+. ....||..+++.+++...++++....
T Consensus 237 ----------------~~~~i~y~GS~~~~-----s~~e~--------~~~~~~~lv~i~~~~~~~v~~i~~~~ 281 (336)
T 2q8u_A 237 ----------------KQPLTIYPGSLIRI-----DFGEE--------ADEKGAVFVELKRGEPPRYERIDASP 281 (336)
T ss_dssp ----------------ETTEEEECCCSSCC-----SGGGT--------TCCCEEEEEEEETTSCCEEEEEECCC
T ss_pred ----------------CCccEEECCCCcCC-----Ccccc--------CCCCEEEEEEEeCCCccEEEEEECCC
Confidence 01122334433211 11110 11358999999766556778886543
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.50 E-value=7.4e-13 Score=119.03 Aligned_cols=181 Identities=15% Similarity=0.163 Sum_probs=110.8
Q ss_pred CCCeEEEEEecCCCCCC---cHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCc
Q 046207 152 DVPYIFGIIGDLGQTYD---SNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 228 (458)
...+||+++||+|.... ..+.+.++++..++|+|+++||+++ .. ..+.++.+ ..|++.|+|||
T Consensus 8 ~~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~--------~~----~~~~l~~~--~~~~~~v~GNh 73 (192)
T 1z2w_A 8 RDRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT--------KE----SYDYLKTL--AGDVHIVRGDF 73 (192)
T ss_dssp ---CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS--------HH----HHHHHHHH--CSEEEECCCTT
T ss_pred ccceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC--------HH----HHHHHHhc--CCCEEEEcCCc
Confidence 34589999999997532 2344555554448999999999984 11 22333333 35899999999
Q ss_pred ccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEE
Q 046207 229 ELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLI 308 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~I 308 (458)
|... .+|. ...++. ..++|
T Consensus 74 D~~~-----------------~lp~---------~~~~~~-----------------------------------~~~~i 92 (192)
T 1z2w_A 74 DENL-----------------NYPE---------QKVVTV-----------------------------------GQFKI 92 (192)
T ss_dssp CCCT-----------------TSCS---------EEEEEE-----------------------------------TTEEE
T ss_pred Cccc-----------------cCCc---------ceEEEE-----------------------------------CCEEE
Confidence 9521 1220 111100 13578
Q ss_pred EEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCC
Q 046207 309 VLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDG 388 (458)
Q Consensus 309 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~g 388 (458)
+++|.+++.... . .+.+..++++.+++++++||+|...... .+++.++..|+.
T Consensus 93 ~l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGS~ 145 (192)
T 1z2w_A 93 GLIHGHQVIPWG-----D---MASLALLQRQFDVDILISGHTHKFEAFE-------------------HENKFYINPGSA 145 (192)
T ss_dssp EEECSCCCCBTT-----C---HHHHHHHHHHHSSSEEECCSSCCCEEEE-------------------ETTEEEEECCCT
T ss_pred EEECCCcCCCCC-----C---HHHHHHHHHhcCCCEEEECCcCcCccEe-------------------ECCEEEEECCcc
Confidence 889955543211 1 2355667778899999999999764321 245677888887
Q ss_pred CCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEe
Q 046207 389 GNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFN 448 (458)
Q Consensus 389 G~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 448 (458)
+.+.. .. + .....+|+.+++.+ ..+.++++.-++++ +.+.++.+.|
T Consensus 146 ~~~~~---~~-~--------~~~~~~y~il~~~~-~~~~~~~~~~~~~~-~~v~~~~~~~ 191 (192)
T 1z2w_A 146 TGAYN---AL-E--------TNIIPSFVLMDIQA-STVVTYVYQLIGDD-VKVERIEYKK 191 (192)
T ss_dssp TCCCC---SS-C--------SCCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred cccCC---CC-C--------cCCCCcEEEEEEEC-CEEEEEEEEccCCE-EEEEEEEEcc
Confidence 65421 00 0 01235899999965 45788888755554 5777777765
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.8e-12 Score=118.67 Aligned_cols=188 Identities=15% Similarity=0.186 Sum_probs=111.6
Q ss_pred CCeEEEEEecCCCCCC---cHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcc
Q 046207 153 VPYIFGIIGDLGQTYD---SNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
-.+||+++||+|.... ..+.+.++.+..++|+|+++||+++ . ...+.++.+ ..|++.|+||||
T Consensus 24 m~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~--------~----~~l~~l~~~--~~~v~~V~GNHD 89 (215)
T 2a22_A 24 FGDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS--------Q----EYVEMLKNI--TKNVYIVSGDLD 89 (215)
T ss_dssp CCEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC--------H----HHHHHHHHH--CSCEEECCCTTC
T ss_pred cCcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC--------H----HHHHHHHHc--CCCEEEecCCCc
Confidence 3589999999997642 2355566554448999999999984 1 222334433 358999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhcc-ccCCCCCeEE
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPK-VNRAETPWLI 308 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~-~~~~~~~~~I 308 (458)
.... . .. | +|+.+ |.. ........+|
T Consensus 90 ~~~~-------~---~~-----~-------------------------------------~~~~~-lp~~~~~~~~~~~i 116 (215)
T 2a22_A 90 SAIF-------N---PD-----P-------------------------------------ESNGV-FPEYVVVQIGEFKI 116 (215)
T ss_dssp CSCC-------B---CC-----G-------------------------------------GGTBC-CCSEEEEEETTEEE
T ss_pred Cccc-------c---cC-----h-------------------------------------hhHhh-CCceEEEecCCeEE
Confidence 6321 0 00 0 00000 000 0000123578
Q ss_pred EEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCC
Q 046207 309 VLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDG 388 (458)
Q Consensus 309 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~g 388 (458)
+++|.+++.... . .+.+..++++.+++++++||+|...... .+++.++..|+.
T Consensus 117 ~l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vl~GHtH~~~~~~-------------------~~~~~~inpGS~ 169 (215)
T 2a22_A 117 GLMHGNQVLPWD-----D---PGSLEQWQRRLDCDILVTGHTHKLRVFE-------------------KNGKLFLNPGTA 169 (215)
T ss_dssp EEECSTTSSSTT-----C---HHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------ETTEEEEECCCS
T ss_pred EEEcCCccCCCC-----C---HHHHHHHHhhcCCCEEEECCcCCCccEe-------------------eCCEEEEECCcc
Confidence 899965543211 1 2355667777899999999999754321 235677888887
Q ss_pred CCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEe
Q 046207 389 GNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFN 448 (458)
Q Consensus 389 G~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 448 (458)
+.+... . + .....+|+.|++.+ ..+.++++.-++++ +.+.+..++|
T Consensus 170 ~~~~~~-~---~--------~~~~~~y~il~i~~-~~i~~~~~~~~~~~-~~v~~~~~~~ 215 (215)
T 2a22_A 170 TGAFSA-L---T--------PDAPPSFMLMALQG-NKVVLYVYDLRDGK-TNVAMSEFSK 215 (215)
T ss_dssp SCCCCT-T---S--------TTCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred cccCCC-C---C--------CCCCCcEEEEEEeC-CcEEEEEEEecCCe-EEEEEEEeeC
Confidence 653210 0 0 01235899999965 45778887755554 4666666554
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=6.4e-13 Score=126.20 Aligned_cols=207 Identities=15% Similarity=0.127 Sum_probs=109.1
Q ss_pred CCCCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 151 PDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
....+||+++||+|...... +..++|+||++||+++.+. ....+.+.+.++.+. ..|+++++||||+
T Consensus 56 ~~~~mri~~iSD~H~~~~~l-------~i~~~D~vi~aGDl~~~g~-----~~e~~~~~~~L~~l~-~~~v~~V~GNHD~ 122 (296)
T 3rl5_A 56 PAGHTRFVCISDTRSRTDGI-------QMPYGDILLHTGDFTELGL-----PSEVKKFNDWLGNLP-YEYKIVIAGNHEL 122 (296)
T ss_dssp CTTEEEEEEEBCCTTCCTTC-------CCCSCSEEEECSCCSSSCC-----HHHHHHHHHHHHTSC-CSEEEECCCTTCG
T ss_pred CCCCeEEEEEeeCCCCcchh-------ccCCCCEEEECCcccCCCC-----HHHHHHHHHHHHhCC-CCeEEEEcCCccc
Confidence 34569999999999774321 2248999999999998764 344455555555542 2468999999998
Q ss_pred CCCCCCCCc---ccCcccceeeccccC---CC-CCCCCceE----EEEcCeEEEEEecCCCcCCCC---hHHHHHHHHHh
Q 046207 231 DYAPEIGEN---VPFKPYTHRYHVPYR---AS-QSTSPLWY----SIKRASAYIIVLSSYSAYGKY---TPQYAWLEKEL 296 (458)
Q Consensus 231 ~~~~~~~~~---~~~~~~~~~f~~P~~---~~-~~~~~~~y----s~~~g~~~fi~Lds~~~~~~~---~~Q~~WL~~~L 296 (458)
......-+. ..+..+...-..+.. .. ....+..| +..+++++|++..-...+... .++.+++.+.+
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~ 202 (296)
T 3rl5_A 123 TFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKW 202 (296)
T ss_dssp GGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHH
T ss_pred ccchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHH
Confidence 432110000 000000000000000 00 00011111 345678999885543222221 11222333333
Q ss_pred ccccCCCCCeEEEEeccccccCCCCCC-ccchHHHHHHHHHH-HHcCccEEEeccccccccccccccceeeecCCccccc
Q 046207 297 PKVNRAETPWLIVLLHSPWYNSNSYHY-MEGESMRVAFESWF-VQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPV 374 (458)
Q Consensus 297 ~~~~~~~~~~~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll-~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~ 374 (458)
... .....|+++|.|++....... .....-.+.|.+.+ ++.+++++++||+|......
T Consensus 203 ~~i---p~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~----------------- 262 (296)
T 3rl5_A 203 NLI---PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM----------------- 262 (296)
T ss_dssp TTS---CTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE-----------------
T ss_pred hhC---CCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceE-----------------
Confidence 332 223468999999987533110 00001123455555 68999999999999743211
Q ss_pred CCCCCCeEEEeCCCCCC
Q 046207 375 KDPSAPVYLTIGDGGNI 391 (458)
Q Consensus 375 ~~~~g~~yiv~G~gG~~ 391 (458)
..+++++|-.|+-|..
T Consensus 263 -~~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 263 -TDGYTTYINASTCTVS 278 (296)
T ss_dssp -ECSSCEEEECBCSCTT
T ss_pred -EECCEEEEECCcCCcC
Confidence 1245677777777754
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=4.3e-12 Score=126.66 Aligned_cols=178 Identities=16% Similarity=0.078 Sum_probs=95.7
Q ss_pred CCCCeEEEEEecCCCCCCc----------HHHHHHHH---hCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh
Q 046207 151 PDVPYIFGIIGDLGQTYDS----------NQTFEHYV---SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA 217 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~----------~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~ 217 (458)
...++||+++||+|.+... ...+.+++ ...+||+||++||+++.... ....+..+.+.++.+..
T Consensus 17 ~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p---~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 17 RGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRP---PVKALRIAMQAFKKLHE 93 (386)
T ss_dssp -CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSC---CHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCC---CHHHHHHHHHHHHHHHh
Confidence 4567999999999987421 12233332 23389999999999876531 22334456667777654
Q ss_pred -ccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChH---HHHHHH
Q 046207 218 -YQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTP---QYAWLE 293 (458)
Q Consensus 218 -~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~---Q~~WL~ 293 (458)
.+|+++++||||........ .....+...+..-. ...++..+-+++.+++++...... ... +++|+.
T Consensus 94 ~~~pv~~v~GNHD~~~~~~~~--~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~ 164 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLGEE--SPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFE 164 (386)
T ss_dssp TTCEEEECCCGGGSCSSTTSC--CGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHH
T ss_pred cCCcEEEEcCCCCCCcccccc--CHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhh
Confidence 58999999999974321100 00000100010000 011222222568899998654321 122 233333
Q ss_pred HHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 294 KELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 294 ~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
..+. ...+.|+++|+|+........ ... +. .+. ++|++++||+|..+
T Consensus 165 ~~~~-----~~~~~Ill~H~~~~~~~~~~~--~~~----~~-~l~--~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 165 SEAK-----NYKKKILMLHQGINPYIPLDY--ELE----HF-DLP--KFSYYALGHIHKRI 211 (386)
T ss_dssp HHHH-----TCSSEEEEECCCCTTTSSSSC--SSC----GG-GSC--CCSEEEECSCCSCE
T ss_pred hhcc-----cCCCEEEEECcCccccCCCCc--ccC----HH-Hhh--hCCeEEccCCCCCc
Confidence 3222 234689999999853211100 000 00 111 39999999999864
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.5e-12 Score=122.03 Aligned_cols=189 Identities=6% Similarity=-0.094 Sum_probs=100.2
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHH---hCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcc
Q 046207 155 YIFGIIGDLGQTYDS-NQTFEHYV---SNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-~~~l~~~~---~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
+||+++||+|..... ...++.+. +.. ++|+||++||+++.+. ... ...+.+..+....|+++++||||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~----~~~---~~~~~l~~l~~~~~~~~v~GNhD 74 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFP----YPK---EVIEVIKDLTKKENVKIIRGKYD 74 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS----CHH---HHHHHHHHHHHHSCEEEECCHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCC----CHH---HHHHHHHhhHhhcCeeEEecchH
Confidence 689999999965322 22333333 322 6899999999998654 221 22334444433368999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCC--CcCCCChHHHHHHHHHhccccCCCCCeE
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSY--SAYGKYTPQYAWLEKELPKVNRAETPWL 307 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 307 (458)
...... ..... .+ .+... ++..... .... ..-....+|++||++........-....
T Consensus 75 ~~~~~~------~~~~~-~~-~~~~~----------~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~ 133 (252)
T 1nnw_A 75 QIIAMS------DPHAT-DP-GYIDK----------LELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNE 133 (252)
T ss_dssp HHHHHS------CTTCS-SS-GGGGG----------SSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEE
T ss_pred HHhhcc------ccccC-Cc-ccccc----------hhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcE
Confidence 631000 00000 00 00000 0000000 0000 0000135788999874433211112347
Q ss_pred EEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeC
Q 046207 308 IVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIG 386 (458)
Q Consensus 308 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G 386 (458)
|+++|++++....... ......+.+..++.++ +++++|+||+|...... .+++++|..|
T Consensus 134 i~~~H~~p~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~-------------------~~~~~~in~G 193 (252)
T 1nnw_A 134 VFGVYGSPINPFDGEV-LAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM-------------------TRYGRVVCPG 193 (252)
T ss_dssp EEEESSCSSCTTTCCC-CSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE-------------------ETTEEEEEEC
T ss_pred EEEEcCCCCCCccccc-CCCCCHHHHHHHHhcCCCCCEEEECCccccceEe-------------------cCCeEEEECC
Confidence 8889988743211110 0111135677788888 99999999999864422 2356788888
Q ss_pred CCCCC
Q 046207 387 DGGNI 391 (458)
Q Consensus 387 ~gG~~ 391 (458)
+.|.+
T Consensus 194 s~~~~ 198 (252)
T 1nnw_A 194 SVGFP 198 (252)
T ss_dssp CSSSC
T ss_pred CccCC
Confidence 87754
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.32 E-value=3.4e-11 Score=106.48 Aligned_cols=162 Identities=17% Similarity=0.128 Sum_probs=101.3
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHH---hCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYV---SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
.+|++++||+|.. ...+.+++ +. ++|+|+++||+... .++.+. .|++.++||||.
T Consensus 6 ~m~i~~isD~H~~---~~~~~~~~~~~~~-~~d~i~~~GD~~~~----------------~l~~l~--~~~~~v~GNhD~ 63 (176)
T 3ck2_A 6 KQTIIVMSDSHGD---SLIVEEVRDRYVG-KVDAVFHNGDSELR----------------PDSPLW--EGIRVVKGNMDF 63 (176)
T ss_dssp CEEEEEECCCTTC---HHHHHHHHHHHTT-TSSEEEECSCCCSC----------------TTCGGG--TTEEECCCTTCC
T ss_pred CcEEEEEecCCCC---HHHHHHHHHHhhc-CCCEEEECCCCchH----------------HHHhhh--CCeEEecCcccc
Confidence 5899999999954 33344333 23 79999999997321 112222 289999999995
Q ss_pred CCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEE
Q 046207 231 DYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVL 310 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~ 310 (458)
.. .+|. .. .+.- ...+|++
T Consensus 64 ~~-----------------~~p~---------~~------------------------------~~~~-----~~~~i~~ 82 (176)
T 3ck2_A 64 YA-----------------GYPE---------RL------------------------------VTEL-----GSTKIIQ 82 (176)
T ss_dssp ST-----------------TCCS---------EE------------------------------EEEE-----TTEEEEE
T ss_pred hh-----------------cCCc---------EE------------------------------EEEE-----CCeEEEE
Confidence 21 1120 00 0000 1247889
Q ss_pred eccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCC
Q 046207 311 LHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGN 390 (458)
Q Consensus 311 ~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~ 390 (458)
+|.|++.... . .+.+.+++++++++++++||+|...... .+++.++..|+.|.
T Consensus 83 ~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 83 THGHLFDINF-----N---FQKLDYWAQEEEAAICLYGHLHVPSAWL-------------------EGKILFLNPGSISQ 135 (176)
T ss_dssp ECSGGGTTTT-----C---SHHHHHHHHHTTCSEEECCSSCCEEEEE-------------------ETTEEEEEECCSSS
T ss_pred ECCCccCCCC-----C---HHHHHHHHHhcCCCEEEECCcCCCCcEE-------------------ECCEEEEECCCCCc
Confidence 9998875321 1 1356677788999999999999764421 23567788888775
Q ss_pred CCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEE
Q 046207 391 IEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQ 444 (458)
Q Consensus 391 ~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~ 444 (458)
+.. ..| ..+|+.+++.+ ..+.+++++ .+|+ +..++
T Consensus 136 ~~~-------~~~--------~~~y~il~~~~-~~~~v~~~~-~~~~--~~~~~ 170 (176)
T 3ck2_A 136 PRG-------TIR--------ECLYARVEIDD-SYFKVDFLT-RDHE--VYPGL 170 (176)
T ss_dssp CCT-------TCC--------SCCEEEEEECS-SEEEEEEEC-TTSC--BCTTC
T ss_pred CCC-------CCC--------CCeEEEEEEcC-CEEEEEEEE-ECCE--Ecchh
Confidence 421 111 24799999954 557888876 4676 44433
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1e-11 Score=117.65 Aligned_cols=220 Identities=11% Similarity=0.078 Sum_probs=118.3
Q ss_pred CCCeEEEEEecCCCCCCc-HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 152 DVPYIFGIIGDLGQTYDS-NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~-~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
..+.||+++||+|..... ...++.+.+. ++|.|+++||+++.+. .. ....+.++. ..|++.|.||||.
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~-~~D~ii~~GDlv~~g~----~~---~~~~~~l~~---~~~~~~v~GNhD~ 77 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQL-GVDEYWLLGDILMPGT----GR---RRILDLLDQ---LPITARVLGNWED 77 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHT-TCCEEEECSCCSSSSS----CS---HHHHHHHHT---SCEEEECCCHHHH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCC----CH---HHHHHHHHc---cCCEEEEcCChHH
Confidence 357999999999965322 2233344444 8999999999998654 21 223333333 2478999999995
Q ss_pred CCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEE
Q 046207 231 DYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVL 310 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~ 310 (458)
... ......+.++.. ...+.. . .+. ...-....++++||++.-......-....|++
T Consensus 78 ~~~---------~~~~~~~~~~~~-----~~~~~~----~----~~~-~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~l 134 (270)
T 3qfm_A 78 SLW---------HGVRKELDSTRP-----SQRYLL----R----QCQ-YVLEEISLEEIEVLHNQPLQIHRQFGDLTVGI 134 (270)
T ss_dssp HHH---------HHHTTCSCTTSH-----HHHHHH----H----HHH-HHHTTSCHHHHHHHHSCCSEEEEEETTEEEEE
T ss_pred HHH---------HhhccccCCCcH-----HHHHHH----H----HHH-HHHHHcCHHHHHHHHhCCCceEEEECCcEEEE
Confidence 210 000000000000 000000 0 000 00012357889999865443211112346788
Q ss_pred eccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCC
Q 046207 311 LHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGN 390 (458)
Q Consensus 311 ~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~ 390 (458)
.|..+.+... .........+.+..++.+.++|++|+||+|...... ..++..+|..|+.|.
T Consensus 135 vHg~p~~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~------------------~~~~~~~iNpGSvg~ 195 (270)
T 3qfm_A 135 SHHLPDKNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY------------------GTGGQLIVNPGSIGQ 195 (270)
T ss_dssp ESSBTTBSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE------------------CTTSCEEEEECCSSS
T ss_pred EECCCCCCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHhee------------------ccCCEEEEECCCccC
Confidence 8876643211 110111223456677778899999999999643211 134678899999997
Q ss_pred CCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEc
Q 046207 391 IEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRN 433 (458)
Q Consensus 391 ~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 433 (458)
+... .+.+. ......|+.|++.++....++|++.
T Consensus 196 pr~~-----~~~~~----~~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 196 PFFL-----DAQLR----KDLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp CCCS-----STTGG----GCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCC-----Ccccc----CCCCCEEEEEEecCCCceEEEEEEe
Confidence 6431 11000 0123579999997655456777654
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.30 E-value=6.4e-12 Score=124.95 Aligned_cols=188 Identities=15% Similarity=0.177 Sum_probs=100.8
Q ss_pred eEEEEEecCCCCCC----c---------HHHHHHHH---hCCCCcEEEEcCccc-cCCCCCCCchhHHHHHHHHHHHHhh
Q 046207 155 YIFGIIGDLGQTYD----S---------NQTFEHYV---SNPKGQAVLFVGDLS-YADDHPQHDNRRWDSWGRFVEKSTA 217 (458)
Q Consensus 155 ~~f~~~gD~~~~~~----~---------~~~l~~~~---~~~~pd~vl~~GDl~-y~~~~~~~~~~~~~~~~~~~~~l~~ 217 (458)
+||++++|+|.+.. . ...+++++ ...+||+||++||++ +... + ....+..+.+.+..+..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~-~--~~~~~~~~~~~l~~l~~ 77 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNN-P--SVVALHDLLDYLKRMMR 77 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSS-C--CHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCC-C--CHHHHHHHHHHHHHHHh
Confidence 58999999998753 1 12344433 223899999999999 4432 1 23344555666666654
Q ss_pred ccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEE--cC-eEEEEEecCCCcCC----CChHHHH
Q 046207 218 YQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIK--RA-SAYIIVLSSYSAYG----KYTPQYA 290 (458)
Q Consensus 218 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~--~g-~~~fi~Lds~~~~~----~~~~Q~~ 290 (458)
.+|+++++||||... ...+..... .++.+.........+.+. .| .+.++++.-..... ....+.+
T Consensus 78 ~~~v~~i~GNHD~~~------~~~~~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~ 149 (379)
T 3tho_B 78 TAPVVVLPGNQDWKG------LKLFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 149 (379)
T ss_dssp HSCEEECCCTTSCTT------HHHHHHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHH
T ss_pred CCCEEEEcCCCcccc------Ccccccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHH
Confidence 489999999999521 000000000 011000000001112222 24 47777776432210 1256788
Q ss_pred HHHHHhccc---cCCCCCeEEEEeccccccCCCCCCccchH-HHHHHHHHHHHcCccEEEecccccccc
Q 046207 291 WLEKELPKV---NRAETPWLIVLLHSPWYNSNSYHYMEGES-MRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 291 WL~~~L~~~---~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~-~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
|+.+.|++. ......+.|+++|.++...... .+.+. +...+...+...++|++++||.|..+.
T Consensus 150 ~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~--~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~ 216 (379)
T 3tho_B 150 FLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY--AGIEQGREIIINRALIPSVVDYAALGHIHSFRE 216 (379)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSSCEE
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEeccccCCccC--CCCccccccccCHHHcCcCCCEEEcccccCCeE
Confidence 998888721 1124567899999998643220 00000 001111122246799999999999865
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.18 E-value=1e-10 Score=109.14 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=85.8
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccC
Q 046207 153 VPYIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 231 (458)
..+|++++||+|.. ...+.++++.. ++|.++++||+++.+. ... ...+.+..+ .+++.+.||||..
T Consensus 2 ~~mri~~isDiHg~---~~~l~~~l~~~~~~d~ii~~GDl~~~g~----~~~---~~~~~l~~~---~~~~~v~GNhD~~ 68 (246)
T 3rqz_A 2 NAMRILIISDVHAN---LVALEAVLSDAGRVDDIWSLGDIVGYGP----RPR---ECVELVRVL---APNISVIGNHDWA 68 (246)
T ss_dssp CCCCEEEECCCTTC---HHHHHHHHHHHCSCSEEEECSCCSSSSS----CHH---HHHHHHHHH---CSSEECCCHHHHH
T ss_pred CCcEEEEEeecCCC---HHHHHHHHHhccCCCEEEECCCcCCCCC----CHH---HHHHHHHhc---CCCEEEeCchHHH
Confidence 35899999999954 34444443321 7999999999998654 221 223333333 2368999999963
Q ss_pred CCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEe
Q 046207 232 YAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLL 311 (458)
Q Consensus 232 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~ 311 (458)
..... .. ..+. +.. .... . ...-....++++||++....... . .|+++
T Consensus 69 ~~~~~-------~~-~~~~-~~~------~~~~------------~-~~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~ 116 (246)
T 3rqz_A 69 CIGRL-------SL-DEFN-PVA------RFAS------------Y-WTTMQLQAEHLQYLESLPNRMID-G---DWTVV 116 (246)
T ss_dssp HTCCC-------CC-C--C-GGG------GCHH------------H-HHHHHCCHHHHHHHHHCCSEEEE-T---TEEEE
T ss_pred HhccC-------Cc-cccC-HHH------HHHH------------H-HHHHHcCHHHHHHHHhCCcEEEE-C---CEEEE
Confidence 21000 00 0000 000 0000 0 00001247889999875444321 1 47788
Q ss_pred ccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccc
Q 046207 312 HSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 312 H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
|.++..... .+... ...+.+++.+++++++|+||+|..
T Consensus 117 Hg~p~~~~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 117 HGSPRHPIW-EYIYN---ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp SSCSSSTTT-CCCCS---HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred ECCcCCccc-cccCC---hHHHHHHHhccCCCEEEECCcCcc
Confidence 887765321 11111 245677888999999999999974
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.17 E-value=7.7e-10 Score=97.84 Aligned_cols=62 Identities=18% Similarity=0.088 Sum_probs=41.9
Q ss_pred CCeEEEEEecCCCCCC---cHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcc
Q 046207 153 VPYIFGIIGDLGQTYD---SNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
..+||+++||+|.... -.+.++++. . ++|+|+++||+++. ...+.++.+ ..|++.|+||||
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~-~~D~ii~~GD~~~~------------~~~~~l~~~--~~~v~~V~GNhD 84 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-K-EYDGVIGLGDYVDL------------DTVILLEKF--SKEFYGVHGNMD 84 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-G-GCSEEEESSCBSCH------------HHHHHHHHH--TSSEEECCCSSS
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-c-CCCEEEECCCCCCH------------HHHHHHHhc--CCCEEEEECCCC
Confidence 3489999999994211 234445544 3 79999999999852 122333333 269999999999
Q ss_pred c
Q 046207 230 L 230 (458)
Q Consensus 230 ~ 230 (458)
.
T Consensus 85 ~ 85 (178)
T 2kkn_A 85 Y 85 (178)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1e-10 Score=104.76 Aligned_cols=65 Identities=17% Similarity=0.122 Sum_probs=40.7
Q ss_pred CCCC-eEEEEEecCCCCCCc-HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCc
Q 046207 151 PDVP-YIFGIIGDLGQTYDS-NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 151 ~~~~-~~f~~~gD~~~~~~~-~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 228 (458)
.... +||+++||+|..... .+.++.+.+. ++|+|+++||+++. ...+.++.+ ..|+++|+|||
T Consensus 21 ~~~g~m~i~~iSD~Hg~~~~l~~~l~~~~~~-~~D~ii~~GDl~~~------------~~~~~l~~l--~~~~~~V~GNh 85 (190)
T 1s3l_A 21 YFQGHMKIGIMSDTHDHLPNIRKAIEIFNDE-NVETVIHCGDFVSL------------FVIKEFENL--NANIIATYGNN 85 (190)
T ss_dssp -----CEEEEECCCTTCHHHHHHHHHHHHHS-CCSEEEECSCCCST------------HHHHHGGGC--SSEEEEECCTT
T ss_pred hhcCCeEEEEEeeCCCCHHHHHHHHHHHhhc-CCCEEEECCCCCCH------------HHHHHHHhc--CCCEEEEeCCC
Confidence 3344 899999999943211 1223333334 89999999999741 122223322 47999999999
Q ss_pred cc
Q 046207 229 EL 230 (458)
Q Consensus 229 D~ 230 (458)
|.
T Consensus 86 D~ 87 (190)
T 1s3l_A 86 DG 87 (190)
T ss_dssp CC
T ss_pred cc
Confidence 95
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.1e-09 Score=106.86 Aligned_cols=247 Identities=13% Similarity=0.076 Sum_probs=123.9
Q ss_pred CCCCeEEEEEecCCCCCC---------cHHHHH----HHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHH---
Q 046207 151 PDVPYIFGIIGDLGQTYD---------SNQTFE----HYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK--- 214 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~---------~~~~l~----~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~--- 214 (458)
+...+||++++|+|.+.. ....++ .+.+. +||+||++||+++.... .......+.+.++.
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~-~~D~VliaGDLfd~~~p---~~~~~~~~~~~lr~~~~ 85 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER-DVDMILLGGDIFHDNKP---SRKALYQALRSLRLNCL 85 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBSSSSC---CHHHHHHHHHHHHHHHB
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhc-CCCEEEEcCccccCCCC---CHHHHHHHHHHHHHhcc
Confidence 456899999999998742 122333 33344 99999999999987652 12222233344333
Q ss_pred ---------H----------------------hhccceEEccCCcccCCCCCCCCcccCcccceeeccccC----CCCC-
Q 046207 215 ---------S----------------------TAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR----ASQS- 258 (458)
Q Consensus 215 ---------l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----~~~~- 258 (458)
+ ...+|++++.||||..... .+......+..|.. +...
T Consensus 86 g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~------~~~s~~~lL~~~g~v~l~g~~~~ 159 (417)
T 4fbw_A 86 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD------GRYSALDILQVTGLVNYFGRVPE 159 (417)
T ss_dssp SSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----------CCCHHHHHHHTTSCEECCCCC-
T ss_pred cCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc------ccccHHHHhccCCeEEEeCCccc
Confidence 2 1278999999999974211 11000011100100 0000
Q ss_pred CCCc---eEEEEcC--eEEEEEecCCCcCCCChHHHHHHHHHhcc-ccC---CCCCeEEEEeccccccCCCCCCccchHH
Q 046207 259 TSPL---WYSIKRA--SAYIIVLSSYSAYGKYTPQYAWLEKELPK-VNR---AETPWLIVLLHSPWYNSNSYHYMEGESM 329 (458)
Q Consensus 259 ~~~~---~ys~~~g--~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~-~~~---~~~~~~Iv~~H~P~~~~~~~~~~~~~~~ 329 (458)
.++. ...+..| .+.+.++.... ...-..++.+...+ ... .+..+.|++.|..........+. .
T Consensus 160 ~~~i~~~pv~l~~g~~~valyG~~~~~----d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi-p--- 231 (417)
T 4fbw_A 160 NDNIVVSPILLQKGFTKLALYGISNVR----DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL-P--- 231 (417)
T ss_dssp --CEEECCEEEEETTEEEEEEEECCCC----HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSC-C---
T ss_pred CCceeEEeEEEEecCceEEEEeccCCc----hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccC-c---
Confidence 0000 1123333 25555555221 11111333333222 111 23457899999987543211110 1
Q ss_pred HHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCccee
Q 046207 330 RVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYR 409 (458)
Q Consensus 330 ~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~ 409 (458)
.-+...++|+|+.||+|..+..... ....++..+-.|+..... +. .-.
T Consensus 232 -----~~l~~~~~DyvalGH~H~~~~~~~~---------------~~~~g~~i~~PGS~~~~s-----~~-------e~E 279 (417)
T 4fbw_A 232 -----ESFIQDFYDFVLWGHEHECLIDGSY---------------NPTQKFTVVQPGSTIATS-----LS-------PGE 279 (417)
T ss_dssp -----GGGSCTTCSEEEEESCCSCEEEEEE---------------ETTTTEEEEECCCSSCSS-----CC-------HHH
T ss_pred -----hhHhhcCCCEEEecCccccceeccc---------------cCCCCEEEEECCCCCcCC-----Cc-------ccc
Confidence 1144567999999999987653200 012344444445443221 11 000
Q ss_pred eCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEe
Q 046207 410 EASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFN 448 (458)
Q Consensus 410 ~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 448 (458)
....||..|++.+ ..+.++++.-+.-...+..++.+..
T Consensus 280 ~~~kg~~lvei~~-~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 280 TAPKHCGILNITG-KDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp HSCCEEEEEEEET-TEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CCCCEEEEEEEEC-CEEEEEEEECCCcccEEEEEEEeec
Confidence 1356999999975 4477888865444445666666533
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.8e-10 Score=103.58 Aligned_cols=137 Identities=17% Similarity=0.222 Sum_probs=82.6
Q ss_pred eEEEEEecCCCCCCcH----------HH----HHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhcc
Q 046207 155 YIFGIIGDLGQTYDSN----------QT----FEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQ 219 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~----------~~----l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~ 219 (458)
+||+++||+|.+.... .. ++.+.+. .++|+|+++||+++.+. .. ....+.++.+ ..
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~----~~---~~~~~~l~~l--~~ 72 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFN----DK---NEYLRIWKAL--PG 72 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSC----CT---TSHHHHHHHS--SS
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCch----hH---HHHHHHHHHC--CC
Confidence 6899999999764321 11 2223332 38999999999997641 11 1233444443 25
Q ss_pred ceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccc
Q 046207 220 AWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKV 299 (458)
Q Consensus 220 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~ 299 (458)
|++.|+||||... . .+...| -. + .+..|| ++.
T Consensus 73 ~~~~v~GNhD~~~-------~---~~~~~~--------------~~----------l----------~~~~~l----~~~ 104 (195)
T 1xm7_A 73 RKILVMGNHDKDK-------E---SLKEYF--------------DE----------I----------YDFYKI----IEH 104 (195)
T ss_dssp EEEEECCTTCCCH-------H---HHTTTC--------------SE----------E----------ESSEEE----EEE
T ss_pred CEEEEeCCCCCch-------h---hhhhhh--------------hc----------h----------hHHHHH----Hhc
Confidence 8999999999521 0 011001 00 0 011122 111
Q ss_pred cCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 300 NRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 300 ~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
..++|+++|+|++....... ....+.+.+++.+++++++|+||+|....
T Consensus 105 ----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 105 ----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp ----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred ----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 23579999999876543322 23357888899999999999999998654
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=4.1e-09 Score=105.67 Aligned_cols=245 Identities=13% Similarity=0.077 Sum_probs=122.9
Q ss_pred CCCCeEEEEEecCCCCCCc---------HHH----HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHH---
Q 046207 151 PDVPYIFGIIGDLGQTYDS---------NQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK--- 214 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~---------~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~--- 214 (458)
....+||++++|+|.+... ... ++.+.+. +||+||++||+++.... .......+.+.++.
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~-~~D~VliaGDLfd~~~p---s~~a~~~~~~~Lr~~~~ 148 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER-DVDMILLGGDIFHDNKP---SRKALYQALRSLRLNCL 148 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCSBSSSSC---CHHHHHHHHHHHHHHHB
T ss_pred CCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhc-CCCEEEEcCccccCCCC---CHHHHHHHHHHHHHhcc
Confidence 4578999999999987431 222 3334444 99999999999987652 12222233344333
Q ss_pred ---------H----------------------hhccceEEccCCcccCCCCCCCCcccCcccceeeccccC----CCCC-
Q 046207 215 ---------S----------------------TAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR----ASQS- 258 (458)
Q Consensus 215 ---------l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----~~~~- 258 (458)
+ ...+|++++.||||...... +......+..|.. +...
T Consensus 149 g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~------~~s~~~LL~~~g~v~l~g~~~~ 222 (472)
T 4fbk_A 149 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDG------RYSALDILQVTGLVNYFGRVPE 222 (472)
T ss_dssp SSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--------CCCHHHHHHHTTSCEECCCCSC
T ss_pred cCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccc------cccHHHHhccCCcEEEeCCccc
Confidence 1 12789999999999742111 1001111100100 0000
Q ss_pred CCCc---eEEEEcCe--EEEEEecCCCcCCCChHHHHHHHHHhcc-ccC---CCCCeEEEEeccccccCCCCCCccchHH
Q 046207 259 TSPL---WYSIKRAS--AYIIVLSSYSAYGKYTPQYAWLEKELPK-VNR---AETPWLIVLLHSPWYNSNSYHYMEGESM 329 (458)
Q Consensus 259 ~~~~---~ys~~~g~--~~fi~Lds~~~~~~~~~Q~~WL~~~L~~-~~~---~~~~~~Iv~~H~P~~~~~~~~~~~~~~~ 329 (458)
.++. ...+..|+ +.+.++.-.. ...-..++.+...+ ... ....+.|+++|..........+. .+
T Consensus 223 ~d~i~~~pv~l~kg~~~valyGl~y~~----d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi-pe-- 295 (472)
T 4fbk_A 223 NDNIVVSPILLQKGFTKLALYGISNVR----DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL-PE-- 295 (472)
T ss_dssp SSSEEECCEEEEETTEEEEEEECCCCC----HHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTTSSC-CG--
T ss_pred CCceeEEEEEEEeCCceEEEEecCCCc----hhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCccccC-Ch--
Confidence 0010 11233333 4455554221 11111333332222 111 12346899999987543211110 11
Q ss_pred HHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCccee
Q 046207 330 RVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYR 409 (458)
Q Consensus 330 ~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~ 409 (458)
-+...++|+|+.||+|..+..... ...++...+-.|+.... .+. .-.
T Consensus 296 ------~ll~~g~DyValGH~H~~~~~~~~---------------~~~~g~~ivyPGS~~~~-----s~~-------e~E 342 (472)
T 4fbk_A 296 ------SFIQDFYDFVLWGHEHECLIDGSY---------------NPTQKFTVVQPGSTIAT-----SLS-------PGE 342 (472)
T ss_dssp ------GGSCTTCSEEEEESCCSCEEEEEE---------------ETTTTEEEEECCCSSCS-----SCC-------GGG
T ss_pred ------hhhhcCCCEEEecCcccceeeecc---------------cCCCCeEEEECCCcccc-----ccC-------ccC
Confidence 133457999999999987653200 01123333444443321 111 000
Q ss_pred eCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEE
Q 046207 410 EASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWL 446 (458)
Q Consensus 410 ~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i 446 (458)
....||..|++.+ ..+.++++.-+.-...+..++.+
T Consensus 343 ~~~kg~~lveI~~-~~v~ve~I~L~t~Rpf~~~~i~L 378 (472)
T 4fbk_A 343 TAPKHCGILNITG-KDFHLEKIRLRTVRPFIMKDIIL 378 (472)
T ss_dssp CSCCEEEEEEEET-TEEEEEEEECSSSCCEEEEEEEG
T ss_pred CCCCEEEEEEEEC-CEEEEEEEECCCcccEEEEEEEE
Confidence 1246999999965 44788888755445556666655
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.1e-09 Score=104.58 Aligned_cols=248 Identities=13% Similarity=0.122 Sum_probs=123.3
Q ss_pred CCCCeEEEEEecCCCCCCc---------HHHHHH----HHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh-
Q 046207 151 PDVPYIFGIIGDLGQTYDS---------NQTFEH----YVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST- 216 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~---------~~~l~~----~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~- 216 (458)
....+||++++|+|.+... ...+++ +.+. +||+||++||+++.... .......+.+.++.+.
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~-~~D~VliaGDlfd~~~~---~~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQEN-EVDFILLGGDLFHENKP---SRKTLHTCLELLRKYCM 104 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBSSSSC---CHHHHHHHHHHHHHHHB
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhc-CCCEEEEcCccccCCCC---CHHHHHHHHHHHHHHhc
Confidence 5578999999999987431 123333 3344 99999999999987651 2233444555555432
Q ss_pred ---------------------------------hccceEEccCCcccCCCCCCCCcccC---cccceeeccccCCCCCCC
Q 046207 217 ---------------------------------AYQAWIWVPGNHELDYAPEIGENVPF---KPYTHRYHVPYRASQSTS 260 (458)
Q Consensus 217 ---------------------------------~~~P~~~v~GNHD~~~~~~~~~~~~~---~~~~~~f~~P~~~~~~~~ 260 (458)
..+|++++.||||............+ ......|.-. ....
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l~~~~lL~~~glv~~fg~~----~~~e 180 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRS----MSVE 180 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTTBCHHHHHHHHTSEEECCCC----CCSS
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccccCHHHHhccCCcEEEECCc----Cccc
Confidence 36999999999996421110000000 0111122100 0001
Q ss_pred Cc---eEEEEcCe--EEEEEecCCCcCCCChHHHHHHH-HHhccccC---CCCCeEEEEeccccccCCCCCCccchHHHH
Q 046207 261 PL---WYSIKRAS--AYIIVLSSYSAYGKYTPQYAWLE-KELPKVNR---AETPWLIVLLHSPWYNSNSYHYMEGESMRV 331 (458)
Q Consensus 261 ~~---~ys~~~g~--~~fi~Lds~~~~~~~~~Q~~WL~-~~L~~~~~---~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~ 331 (458)
.. ...++-|+ +.+.++.... ...-...+. +.++.... .+..+.|++.|......+...+ -.
T Consensus 181 ~i~~~Pv~l~~g~~~valyGl~~~~----~~~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~~~~--ip---- 250 (431)
T 3t1i_A 181 KIDISPVLLQKGSTKIALYGLGSIP----DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNF--IP---- 250 (431)
T ss_dssp CEEECCEEEEETTEEEEEEEECCCC----HHHHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSSSSS--CC----
T ss_pred ceeeEEEEEecCCEeEEEEeCCCCC----HHHHhhhhccccceeecccccCCCceEEEEECCCccCCCcccc--CC----
Confidence 10 11233343 5666664211 111111111 11211111 1234789999997632211111 01
Q ss_pred HHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeC
Q 046207 332 AFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREA 411 (458)
Q Consensus 332 ~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~ 411 (458)
.-+...++|+|+.||+|..+..... ....++..+-.|+.-.. .+. .-...
T Consensus 251 ---~~l~~~~~Dyv~lGH~H~~~~~~~~---------------~~~~~~~i~yPGS~~~~-----s~~-------e~E~~ 300 (431)
T 3t1i_A 251 ---EQFLDDFIDLVIWGHEHECKIAPTK---------------NEQQLFYISQPGSSVVT-----SLS-------PGEAV 300 (431)
T ss_dssp ---GGGSCTTCCEEEECSCCSCEEEEEE---------------CTTTCCEEEECCCSSCC-----SCC-------HHHHS
T ss_pred ---HhHhhCCCCEEEecccccccccccc---------------cCCCCEEEEeCCCCccc-----CcC-------cccCC
Confidence 1123457999999999987653210 01224444444443321 111 10013
Q ss_pred ceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEE
Q 046207 412 SFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLF 447 (458)
Q Consensus 412 ~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 447 (458)
..||..|++.+ ..+.++++.-+.-...+..++.+.
T Consensus 301 ~k~~~lvei~~-~~~~ve~i~l~~~R~f~~~~v~l~ 335 (431)
T 3t1i_A 301 KKHVGLLRIKG-RKMNMHKIPLHTVRQFFMEDIVLA 335 (431)
T ss_dssp CCEEEEEEEET-TEEEEEEEECSSSCCEEEEEEEGG
T ss_pred CCEEEEEEEEC-CEEEEEEEECCCcceEEEEEEEEe
Confidence 45999999965 457888886543444455555553
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.04 E-value=7.2e-10 Score=108.23 Aligned_cols=73 Identities=18% Similarity=0.284 Sum_probs=51.1
Q ss_pred eEEEEEecCCCCCCc----------HHHHHH----HHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-cc
Q 046207 155 YIFGIIGDLGQTYDS----------NQTFEH----YVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQ 219 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~----------~~~l~~----~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~ 219 (458)
+||+++||+|.+... ...+++ +.+. +||+||++||+++... + ....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~vl~~GDl~d~~~-~--~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQE-NVDFILIAGDLFHSSR-P--SPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHT-TCSEEEEESCSBSSSS-C--CHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhc-CCCEEEECCCcCCCCC-C--CHHHHHHHHHHHHHHHHCCC
Confidence 589999999987531 122332 3334 8999999999998653 1 22344556667777654 68
Q ss_pred ceEEccCCcccC
Q 046207 220 AWIWVPGNHELD 231 (458)
Q Consensus 220 P~~~v~GNHD~~ 231 (458)
|++.++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999974
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.86 E-value=4e-08 Score=89.03 Aligned_cols=73 Identities=12% Similarity=0.085 Sum_probs=45.2
Q ss_pred CeEEEEEecCCCCCCcH-HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhH--HHHHHHHHHHHhhccceEEccCCccc
Q 046207 154 PYIFGIIGDLGQTYDSN-QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRR--WDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~-~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~--~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
.+|++++||+|...... +.++.+.+. ++|+|+++||+++.+.... .... .....+.++.+ ..|++.++||||.
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~-~~d~vi~~GDl~~~g~~~~-~~~~~~~~~~~~~l~~~--~~~v~~V~GNHD~ 100 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQS-GAQWLVILGDVLNHGPRNA-LPEGYAPAKVVERLNEV--AHKVIAVRGNCDS 100 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHH-TCSEEEECSCCSCCCTTSC-CCTTBCHHHHHHHHHTT--GGGEEECCCTTCC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhc-CCCEEEECCCccccCcccc-cccccCHHHHHHHHHhc--CCceEEEECCCch
Confidence 48999999999653221 223333333 7999999999997643100 0111 13334444443 2589999999995
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.77 E-value=6.5e-09 Score=107.58 Aligned_cols=188 Identities=15% Similarity=0.109 Sum_probs=92.3
Q ss_pred CCCeEEEEEecCCCCCCc-------HH----HHHHHHhCC---CC-cEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh
Q 046207 152 DVPYIFGIIGDLGQTYDS-------NQ----TFEHYVSNP---KG-QAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST 216 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~-------~~----~l~~~~~~~---~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~ 216 (458)
...++|++++|+|..... .. .++++.+.. ++ +++|.+||++..... ......+...+.+..+
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~--~~~~~~~~~~~~ln~l- 82 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE--SDLQDAEPDFRGMNLV- 82 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHH--HHTTTTHHHHHHHHHH-
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcch--hhhcCCcHHHHHHhcc-
Confidence 356999999999975321 12 233333221 35 799999999854220 0000112334445444
Q ss_pred hccceEEccCCcccCCCCCCCCcccCcccceeeccccCC-------CC-CCCCceEEEEcCe--EEEEEecCCCc--CC-
Q 046207 217 AYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRA-------SQ-STSPLWYSIKRAS--AYIIVLSSYSA--YG- 283 (458)
Q Consensus 217 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~~-~~~~~~ys~~~g~--~~fi~Lds~~~--~~- 283 (458)
-+-+.++||||+.... ..+........+|.-. .+ .....|..++.++ +.||++.+... +.
T Consensus 83 --g~d~~~~GNHEfd~g~-----~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~ 155 (516)
T 1hp1_A 83 --GYDAMAIGNHEFDNPL-----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN 155 (516)
T ss_dssp --TCCEEECCGGGGSSCH-----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSS
T ss_pred --CCCEEeeccccccCCH-----HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccC
Confidence 2447899999985321 1111111111111100 00 0012355567775 66777765431 11
Q ss_pred C----------ChHH-HHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccc
Q 046207 284 K----------YTPQ-YAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHS 352 (458)
Q Consensus 284 ~----------~~~Q-~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~ 352 (458)
. ..+. .+|++ +|++. .+.+.+|+++|.|....... ++.......+...+...+||++|+||.|.
T Consensus 156 p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~ 230 (516)
T 1hp1_A 156 PEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQD 230 (516)
T ss_dssp CCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCC
T ss_pred cCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCc
Confidence 0 0122 23333 34321 25678999999998543211 11101112233333334599999999997
Q ss_pred cc
Q 046207 353 YE 354 (458)
Q Consensus 353 y~ 354 (458)
..
T Consensus 231 ~~ 232 (516)
T 1hp1_A 231 PV 232 (516)
T ss_dssp BC
T ss_pred cc
Confidence 64
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.77 E-value=1.4e-08 Score=105.70 Aligned_cols=175 Identities=15% Similarity=0.095 Sum_probs=92.1
Q ss_pred CCCeEEEEEecCCCCCC--------------cHHH----HHHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHH
Q 046207 152 DVPYIFGIIGDLGQTYD--------------SNQT----FEHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFV 212 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~--------------~~~~----l~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~ 212 (458)
...++|++++|+|.... .... ++++.+. +|| ++|.+||++...... .........+.+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~-~~~~l~l~~GD~~~gs~~~--~~~~~~~~~~~l 103 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWAR-AKNPLFLDAGDVFQGTLYF--NQYRGLADRYFM 103 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHH-SSSEEEEECSCCSSSSHHH--HHHTTHHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhh-CCCEEEEeCCCCCCCcHHH--HHhCCcHHHHHH
Confidence 45799999999996421 1122 3344444 677 899999999753200 000112223334
Q ss_pred HHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCC-----C-----CCCCceEEEEcCe--EEEEEecCCC
Q 046207 213 EKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS-----Q-----STSPLWYSIKRAS--AYIIVLSSYS 280 (458)
Q Consensus 213 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-----~-----~~~~~~ys~~~g~--~~fi~Lds~~ 280 (458)
..+ -+-+.++||||+... ...+..+.+...+|.-.. . .....|..++.++ +.|+++.+..
T Consensus 104 n~l---g~d~~~lGNHEfd~g-----~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~ 175 (552)
T 2z1a_A 104 HRL---RYRAMALGNHEFDLG-----PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPD 175 (552)
T ss_dssp HHT---TCCEEECCGGGGTTC-----HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTT
T ss_pred Hhc---CCCccccccccccCC-----HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccc
Confidence 333 344789999998542 111111111111111100 0 0122455677765 6677776542
Q ss_pred c--CC---------CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEec
Q 046207 281 A--YG---------KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAG 348 (458)
Q Consensus 281 ~--~~---------~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~G 348 (458)
. +. ...++.+...++|++ .+.+.+|++.|.|.... ..+.++ .+||++|+|
T Consensus 176 ~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgG 237 (552)
T 2z1a_A 176 TREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGG 237 (552)
T ss_dssp HHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEEC
T ss_pred hhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeC
Confidence 1 00 111333333344543 45678999999986321 122333 579999999
Q ss_pred ccccccc
Q 046207 349 HVHSYER 355 (458)
Q Consensus 349 H~H~y~r 355 (458)
|+|....
T Consensus 238 HtH~~~~ 244 (552)
T 2z1a_A 238 HSHTLLG 244 (552)
T ss_dssp SSCCCBS
T ss_pred CcCcccc
Confidence 9998654
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.5e-07 Score=97.40 Aligned_cols=186 Identities=17% Similarity=0.167 Sum_probs=92.1
Q ss_pred CCCCeEEEEEecCCCCCC-------------cH----HHHHHHHhCCCCc-EEEEcCccccCCCCCCCchhH--------
Q 046207 151 PDVPYIFGIIGDLGQTYD-------------SN----QTFEHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRR-------- 204 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~-------------~~----~~l~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~-------- 204 (458)
+...++|++++|+|.... .. ..++++.+. +++ ++|.+||++.... ...
T Consensus 16 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~-~~~~l~l~~GD~~~gs~-----~~~~~~~~~~~ 89 (527)
T 3qfk_A 16 QGSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQ-YDQSFKIDNGDFLQGSP-----FCNYLIAHSGS 89 (527)
T ss_dssp --CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTT-SSEEEEEECSCCSSSSH-----HHHHHHHTTCS
T ss_pred CCCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhc-CCCEEEEECCCcCCCcH-----HHHHHhhcccC
Confidence 346799999999996421 01 233444444 565 7788999997542 111
Q ss_pred HHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCC-------CCCCCceEEEEcCe--EEEEE
Q 046207 205 WDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS-------QSTSPLWYSIKRAS--AYIIV 275 (458)
Q Consensus 205 ~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-------~~~~~~~ys~~~g~--~~fi~ 275 (458)
.....+.+..+ -+-+.++||||+.... ..+..+.....+|.-.. ......|..++.++ +-||+
T Consensus 90 ~~~~~~~ln~l---g~D~~t~GNHefd~G~-----~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG 161 (527)
T 3qfk_A 90 SQPLVDFYNRM---AFDFGTLGNHEFNYGL-----PYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIG 161 (527)
T ss_dssp SHHHHHHHHHT---CCCEECCCGGGGTTCH-----HHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEE
T ss_pred cchHHHHHHhc---CCcEEeccccccccCH-----HHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEE
Confidence 12233333333 2346789999985421 11111111111121100 00112355667776 56677
Q ss_pred ecCCCc--CCC--------ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCC------CccchHHHHHHHHHHHH
Q 046207 276 LSSYSA--YGK--------YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYH------YMEGESMRVAFESWFVQ 339 (458)
Q Consensus 276 Lds~~~--~~~--------~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~------~~~~~~~~~~l~~ll~~ 339 (458)
+.+... +.. .....+.+++.+++.+ .+.+.+|+++|.+........ .+++. ...+..-+ .
T Consensus 162 ~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~--~~~la~~~-~ 237 (527)
T 3qfk_A 162 LTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE--GYAMLEAF-S 237 (527)
T ss_dssp EECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--HHHHHHHH-G
T ss_pred eccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--HHHHHHhc-C
Confidence 765421 110 1122344444444433 346789999998764321100 11111 11222212 2
Q ss_pred cCccEEEeccccccc
Q 046207 340 HKVDLVVAGHVHSYE 354 (458)
Q Consensus 340 ~~Vdlvl~GH~H~y~ 354 (458)
.+||++|+||+|...
T Consensus 238 ~giDlIlgGHtH~~~ 252 (527)
T 3qfk_A 238 KDIDIFITGHQHRQI 252 (527)
T ss_dssp GGCSEEECCSSCCEE
T ss_pred CCCcEEEECCCCccc
Confidence 479999999999864
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.3e-07 Score=98.24 Aligned_cols=177 Identities=15% Similarity=0.120 Sum_probs=91.3
Q ss_pred CCCeEEEEEecCCCCCCc-----------------HHH----HHHHHhCCCC-cEEEEcCccccCCCCCCCchhHHHHHH
Q 046207 152 DVPYIFGIIGDLGQTYDS-----------------NQT----FEHYVSNPKG-QAVLFVGDLSYADDHPQHDNRRWDSWG 209 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~-----------------~~~----l~~~~~~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~ 209 (458)
...++|++++|+|..... ... ++++.+. ++ +++|.+||++....+. .........
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~-~~~~l~l~~GD~~~g~~~~--~~~~g~~~~ 99 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRA-EPNVLLLDAGDQYQGTIWF--TVYKGAEVA 99 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHH-CSSEEEEECSCCSSSSHHH--HHHTTHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhh-CCCEEEEECCccCCCchhh--hhhCChHHH
Confidence 457999999999954211 122 3344443 44 6999999999754300 001112233
Q ss_pred HHHHHHhhccceEEccCCcccCCCCCCCCcccCc-ccceeeccccCCCC---C---------CCCceEEEEcCe--EEEE
Q 046207 210 RFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFK-PYTHRYHVPYRASQ---S---------TSPLWYSIKRAS--AYII 274 (458)
Q Consensus 210 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~-~~~~~f~~P~~~~~---~---------~~~~~ys~~~g~--~~fi 274 (458)
+.+..+ -+-+.++||||+.... ..+. .+.....+|.-... . ....|..++.++ +-||
T Consensus 100 ~~ln~l---g~d~~~~GNHEfd~g~-----~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgii 171 (546)
T 4h2g_A 100 HFMNAL---RYDAMALGNHEFDNGV-----EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIV 171 (546)
T ss_dssp HHHHHH---TCSEEECCGGGGTTHH-----HHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEE
T ss_pred HHHHhc---CCcEEeccCcccccCH-----HHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEE
Confidence 444443 2336789999985421 1111 11111112211000 0 113455677776 5566
Q ss_pred EecCCCc--C-CC-----ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEE
Q 046207 275 VLSSYSA--Y-GK-----YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLV 345 (458)
Q Consensus 275 ~Lds~~~--~-~~-----~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlv 345 (458)
++.+... + .. .....+.+++.+++.+..+.+.+|+++|.+... . . .+.++ .+||++
T Consensus 172 G~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~--------d----~---~la~~~~giDlI 236 (546)
T 4h2g_A 172 GYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM--------D----K---LIAQKVRGVDVV 236 (546)
T ss_dssp EEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------H----H---HHHHHSTTCCEE
T ss_pred EecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc--------h----H---HHHHhCCCCcEE
Confidence 6655321 0 00 012234444444443334577899999987531 0 1 12222 379999
Q ss_pred Eeccccccc
Q 046207 346 VAGHVHSYE 354 (458)
Q Consensus 346 l~GH~H~y~ 354 (458)
|+||+|...
T Consensus 237 lgGHtH~~~ 245 (546)
T 4h2g_A 237 VGGHSNTFL 245 (546)
T ss_dssp ECCSSCCCC
T ss_pred EeCCcCccc
Confidence 999999864
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=2.5e-07 Score=96.72 Aligned_cols=178 Identities=15% Similarity=0.098 Sum_probs=91.0
Q ss_pred CCCCeEEEEEecCCCCCCc------------------HHH----HHHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHH
Q 046207 151 PDVPYIFGIIGDLGQTYDS------------------NQT----FEHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDS 207 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~------------------~~~----l~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~ 207 (458)
....++|++++|+|..... ... ++++.+. +++ ++|.+||++....+. .......
T Consensus 9 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~-~~~~l~l~~GD~~~gs~~~--~~~~g~~ 85 (579)
T 3ztv_A 9 KAVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKK-YKNPLVLHAGDAITGTLYF--TLFGGSA 85 (579)
T ss_dssp CCEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHH-SSSEEEEECSCCSCSSHHH--HTTTTHH
T ss_pred CceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhh-CCCEEEEeCCCCCCCceee--eecCCHH
Confidence 3456999999999954322 222 3334333 455 899999999754200 0001122
Q ss_pred HHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccC--------CCCC--CCCceEEEEcCe--EEEEE
Q 046207 208 WGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR--------ASQS--TSPLWYSIKRAS--AYIIV 275 (458)
Q Consensus 208 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~--------~~~~--~~~~~ys~~~g~--~~fi~ 275 (458)
..+.|..+ -+-+.++||||+.... ..+..+.....+|.- +... .-..|..++.++ +-||+
T Consensus 86 ~~~~ln~l---g~D~~tlGNHEfd~G~-----~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG 157 (579)
T 3ztv_A 86 DAAVMNAG---NFHYFTLGNHEFDAGN-----EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIG 157 (579)
T ss_dssp HHHHHHHH---TCSEEECCSGGGTTHH-----HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEE
T ss_pred HHHHHHhc---CcCeeeccccccccCH-----HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEE
Confidence 33444443 2345789999985321 111111111112210 0000 012355667776 66777
Q ss_pred ecC-CC-----cCCC---ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEE
Q 046207 276 LSS-YS-----AYGK---YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLV 345 (458)
Q Consensus 276 Lds-~~-----~~~~---~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlv 345 (458)
+.+ .. .... .....+-+++.+++.+..+.+.+|+++|.+... .. .+.++ .+||++
T Consensus 158 ~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~---~la~~~~giDlI 222 (579)
T 3ztv_A 158 LDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NI---EIAQKVNDIDVI 222 (579)
T ss_dssp EECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HH---HHHHHCSSCCEE
T ss_pred EEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hH---HHHHhCCCCCEE
Confidence 744 10 0001 112233444444444335567899999987521 01 12222 379999
Q ss_pred Eeccccccc
Q 046207 346 VAGHVHSYE 354 (458)
Q Consensus 346 l~GH~H~y~ 354 (458)
|+||+|...
T Consensus 223 lgGHtH~~~ 231 (579)
T 3ztv_A 223 VTGDSHYLY 231 (579)
T ss_dssp EECSSCCEE
T ss_pred EeCCCCccc
Confidence 999999865
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=3.4e-07 Score=94.37 Aligned_cols=186 Identities=14% Similarity=0.076 Sum_probs=88.9
Q ss_pred CCeEEEEEecCCCCCCc---------------HHH----HHHHHhCCCCcEEEE-cCccccCCCCCCCchhHHHHHHHHH
Q 046207 153 VPYIFGIIGDLGQTYDS---------------NQT----FEHYVSNPKGQAVLF-VGDLSYADDHPQHDNRRWDSWGRFV 212 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~---------------~~~----l~~~~~~~~pd~vl~-~GDl~y~~~~~~~~~~~~~~~~~~~ 212 (458)
..++|+.++|+|..... ... ++++.+. +++.+++ +||++...... .....+...+.+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~-~~~~llldaGD~~~g~~~~--~~~~g~~~~~~l 81 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAK-NKATWFFDAGDYFTGPYIS--SLTKGKAIIDIM 81 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHH-CSSEEEEECSCCSSSSHHH--HTTTTHHHHHHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhc-CCCeEEEECCCCCCCchhh--hhcCChHHHHHH
Confidence 46999999999954211 222 3334444 6777666 99998742100 001112222333
Q ss_pred HHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCC-------CC-CC-CCceEEEEcCe--EEEEEecCCC-
Q 046207 213 EKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRA-------SQ-ST-SPLWYSIKRAS--AYIIVLSSYS- 280 (458)
Q Consensus 213 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~~-~~-~~~~ys~~~g~--~~fi~Lds~~- 280 (458)
. .--+-++++||||+.+.. ..+..+.....+|.-. .+ .. ...|..++.++ +-||++-+..
T Consensus 82 n---~lg~D~~tlGNHEfd~G~-----~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~ 153 (509)
T 3ive_A 82 N---TMPFDAVTIGNHEFDHGW-----DNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFA 153 (509)
T ss_dssp T---TSCCSEECCCGGGGTTCH-----HHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHH
T ss_pred H---hcCCcEEeecccccccCH-----HHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcc
Confidence 3 223557789999985421 1111111111111110 00 00 23355667776 5667774321
Q ss_pred ----cC---CC---ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCc-c---chHHHHHHHHHHHH-cCccEE
Q 046207 281 ----AY---GK---YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYM-E---GESMRVAFESWFVQ-HKVDLV 345 (458)
Q Consensus 281 ----~~---~~---~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~-~---~~~~~~~l~~ll~~-~~Vdlv 345 (458)
.+ .. .....+.+++.+++.+.. .+.+|+++|.+.-........ + ..... ..+.++ .+||++
T Consensus 154 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDlI 229 (509)
T 3ive_A 154 FNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDIL 229 (509)
T ss_dssp HHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCEE
T ss_pred cccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcEE
Confidence 00 00 122334444444443324 778999999985322111000 0 01111 223333 379999
Q ss_pred Eecccccc
Q 046207 346 VAGHVHSY 353 (458)
Q Consensus 346 l~GH~H~y 353 (458)
|+||.|..
T Consensus 230 lgGHtH~~ 237 (509)
T 3ive_A 230 ITGHAHVG 237 (509)
T ss_dssp EEESSCCC
T ss_pred EeCCcCcc
Confidence 99999964
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.42 E-value=1.2e-06 Score=91.20 Aligned_cols=141 Identities=12% Similarity=0.085 Sum_probs=73.6
Q ss_pred Cc-EEEEcCccccCCCCCCCchhHH---HHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCC-
Q 046207 182 GQ-AVLFVGDLSYADDHPQHDNRRW---DSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS- 256 (458)
Q Consensus 182 pd-~vl~~GDl~y~~~~~~~~~~~~---~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~- 256 (458)
|| ++|.+||++.... ...+ +...+.++.+ ..+++ + ||||+... ...+..+...+.+|.-..
T Consensus 123 pd~Lll~~GD~~~gs~-----~~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G-----~~~l~~~l~~~~~p~L~aN 188 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSG-----LSLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLG-----RERVEELLGLFRGEFLSYN 188 (562)
T ss_dssp CCEEEEECSCCSSSSH-----HHHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGC-----HHHHHHHHHHCCSEECCSS
T ss_pred CCEEEEeCCCCCCcch-----hhhhhCCHHHHHHHHhh--CCcEE-e-cchhcccC-----HHHHHHHHHhCCCCEEEEE
Confidence 78 8999999997532 1111 2234445544 35554 7 99998532 111111222222221110
Q ss_pred ------C-CCCCceEEEEcCe--EEEEEecCCCc-------------CCCChHHHHHHHHHhccccCCCCCeEEEEeccc
Q 046207 257 ------Q-STSPLWYSIKRAS--AYIIVLSSYSA-------------YGKYTPQYAWLEKELPKVNRAETPWLIVLLHSP 314 (458)
Q Consensus 257 ------~-~~~~~~ys~~~g~--~~fi~Lds~~~-------------~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P 314 (458)
+ .....|..++.++ +-||++.+... +....+..+-+.++|++ .+.+.+|++.|.|
T Consensus 189 v~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g 265 (562)
T 2wdc_A 189 IVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNG 265 (562)
T ss_dssp CEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSC
T ss_pred EEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCC
Confidence 0 0012355566665 66777765321 11122333322333443 4567899999998
Q ss_pred cccCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 315 WYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
.... ..+.++ .+||++|+||.|...
T Consensus 266 ~~~d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 266 MQLD---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HHHH---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred Ccch---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 6310 123333 489999999999864
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.39 E-value=3.4e-07 Score=83.63 Aligned_cols=63 Identities=25% Similarity=0.294 Sum_probs=42.2
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHh----CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcc
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYVS----NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~~----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
..+++++||+|.. ...+.++++ ..++|.++++||+++.+. ... +.++.+. ..+++.+.||||
T Consensus 12 ~~~i~visDiHg~---~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~----~~~------~~~~~l~-~~~~~~v~GNhd 77 (221)
T 1g5b_A 12 YRNIWVVGDLHGC---YTNLMNKLDTIGFDNKKDLLISVGDLVDRGA----ENV------ECLELIT-FPWFRAVRGNHE 77 (221)
T ss_dssp CSCEEEECCCTTC---HHHHHHHHHHHTCCTTTCEEEECSCCSSSSS----CHH------HHHGGGG-STTEEECCCHHH
T ss_pred CceEEEEEcCCCC---HHHHHHHHHHccCCCCCCEEEEeCCccCCCC----ChH------HHHHHHh-cCCEEEEccCcH
Confidence 4789999999954 333333332 236899999999998764 221 2222222 358999999999
Q ss_pred c
Q 046207 230 L 230 (458)
Q Consensus 230 ~ 230 (458)
.
T Consensus 78 ~ 78 (221)
T 1g5b_A 78 Q 78 (221)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.33 E-value=5.7e-06 Score=77.69 Aligned_cols=174 Identities=13% Similarity=0.028 Sum_probs=90.9
Q ss_pred CeEEEEEecCCCCCCc---HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 154 PYIFGIIGDLGQTYDS---NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~---~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
.+||+++||.+..... ...+.++.++.++|+++..||.+..+.. .. ....+.+..+ .+- ..+.||||+
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g---~~---~~~~~~ln~~--G~D-a~TlGNHef 74 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKG---LS---LKHYEFLKEA--GVN-YITMGNHTW 74 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSS---CC---HHHHHHHHHH--TCC-EEECCTTTT
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCC---cC---HHHHHHHHhc--CCC-EEEEccCcc
Confidence 5899999999733211 1223444443258999999999876631 11 1223334333 222 458899998
Q ss_pred CCCCCCCCcccCcccceeec----cccCCCCC-CCCceEEEEcCe--EEEEEecCCCcCC--CChHHHHHHHHHhccccC
Q 046207 231 DYAPEIGENVPFKPYTHRYH----VPYRASQS-TSPLWYSIKRAS--AYIIVLSSYSAYG--KYTPQYAWLEKELPKVNR 301 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~----~P~~~~~~-~~~~~ys~~~g~--~~fi~Lds~~~~~--~~~~Q~~WL~~~L~~~~~ 301 (458)
+...+ ...|..-. +.- +|...... .+..|..++.++ +-+|.|-+...+. ....-.+.+++.++ +
T Consensus 75 D~g~~---~~~~l~~~-~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~ 147 (281)
T 1t71_A 75 FQKLD---LAVVINKK-DLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---K 147 (281)
T ss_dssp CCGGG---HHHHTTCT-TEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---T
T ss_pred cCCcc---HHHHhhhc-CEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---h
Confidence 65311 00110000 111 22211000 233566778776 5566665543122 12223445566655 2
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+.+.+||.+|.-. ..+ .+.+.. .-..+||+++.||+|....
T Consensus 148 ~~~diIIv~~H~g~----------t~E-k~~la~-~~dg~VD~VvGgHTHv~t~ 189 (281)
T 1t71_A 148 RDCDLHIVDFHAET----------TSE-KNAFCM-AFDGYVTTIFGTHTHVPSA 189 (281)
T ss_dssp CCCSEEEEEEECSC----------HHH-HHHHHH-HHTTTSSEEEEESSSSCCT
T ss_pred cCCCEEEEEeCCCc----------hHH-HHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 56788999999521 111 112222 1234699999999998654
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.18 E-value=2.7e-05 Score=72.11 Aligned_cols=170 Identities=12% Similarity=0.067 Sum_probs=88.6
Q ss_pred eEEEEEecCCCCCCcHHH----HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+|++++||. .+...... +.++.++ . |++|..|+.+..+... . ....+.+..+ .+- ..+.||||+
T Consensus 1 m~ilf~GDv-~g~~G~~~~~~~l~~lr~~-~-d~vi~nge~~~~G~g~---~---~~~~~~l~~~--G~D-a~TlGNHef 68 (255)
T 1t70_A 1 MRVLFIGDV-FGQPGRRVLQNHLPTIRPQ-F-DFVIVNMENSAGGFGM---H---RDAARGALEA--GAG-CLTLGNHAW 68 (255)
T ss_dssp CEEEEECCB-BHHHHHHHHHHHHHHHGGG-C-SEEEEECTBTTTTSSC---C---HHHHHHHHHH--TCS-EEECCTTTT
T ss_pred CEEEEEecc-CChHHHHHHHHHHHHHHhh-C-CEEEECCCCccCCcCC---C---HHHHHHHHhC--CCC-EEEeccccc
Confidence 589999998 33222233 3444444 4 9999998888765311 1 1223333333 233 457799998
Q ss_pred CCCCCCCCcccCcccce-eeccccCCC--CCCCCceEEEEcCe--EEEEEecCCCcCCCChHHHHHHHHHhccccCCCCC
Q 046207 231 DYAPEIGENVPFKPYTH-RYHVPYRAS--QSTSPLWYSIKRAS--AYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETP 305 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~-~f~~P~~~~--~~~~~~~ys~~~g~--~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 305 (458)
+.. . ...+..-.. +.-.|.+-+ +..+..|.-++.++ +-+|.|-+.........-.+-+++.+++. +.+
T Consensus 69 D~~-~---l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d 141 (255)
T 1t70_A 69 HHK-D---IYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLG 141 (255)
T ss_dssp SST-T---HHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCC
T ss_pred cCc-h---HHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCC
Confidence 642 1 111110011 111122211 11234566778776 55666655432222233344566666664 467
Q ss_pred eEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 306 WLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 306 ~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+||.+|.-. ..+ .+.+.. .-.-+||+++.||+|....
T Consensus 142 ~IIv~~H~e~----------t~E-k~~la~-~~dg~vd~VvGgHTHv~~~ 179 (255)
T 1t70_A 142 TVFVDFHAEA----------TSE-KEAMGW-HLAGRVAAVIGTHTHVPTA 179 (255)
T ss_dssp EEEEEEECSC----------HHH-HHHHHH-HHTTSSSEEEEESSCSCBS
T ss_pred EEEEEeCCCC----------hHH-HHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 8999999421 111 112222 2234699999999998654
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.17 E-value=2.5e-05 Score=71.98 Aligned_cols=167 Identities=13% Similarity=0.139 Sum_probs=86.3
Q ss_pred eEEEEEecCCCCCCcH----HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~----~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+||+++||. .+.... ..+.++.++ . |++|..|..+..+... . +...+.+..+ .+-+ .+.||||+
T Consensus 1 m~ilfiGDi-~g~~G~~~v~~~l~~lr~~-~-d~vi~ngen~~~G~g~---~---~~~~~~l~~~--G~D~-~T~GNHef 68 (252)
T 2z06_A 1 MRVLFIGDV-MAEPGLRAVGLHLPDIRDR-Y-DLVIANGENAARGKGL---D---RRSYRLLREA--GVDL-VSLGNHAW 68 (252)
T ss_dssp CEEEEECCB-CHHHHHHHHHHHHHHHGGG-C-SEEEEECTTTTTTSSC---C---HHHHHHHHHH--TCCE-EECCTTTT
T ss_pred CEEEEEEec-CCcccHHHHHHHHHHHHhh-C-CEEEEeCCCccCCCCc---C---HHHHHHHHhC--CCCE-EEeccEee
Confidence 589999998 332222 234455555 5 8988888777655411 1 1222333333 3344 48899998
Q ss_pred CCCCCCCCcccCccccee--eccccCCC-CCCCCceEEEEcCeEEE--EEecCCCcCCCChHHHHHHHHHhccccCCCCC
Q 046207 231 DYAPEIGENVPFKPYTHR--YHVPYRAS-QSTSPLWYSIKRASAYI--IVLSSYSAYGKYTPQYAWLEKELPKVNRAETP 305 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~--f~~P~~~~-~~~~~~~ys~~~g~~~f--i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 305 (458)
+.. + ...+.+. .-.|.+-+ +.....|.-++.++.++ |.|-..........-.+-+++.+++.+ .+
T Consensus 69 D~~-~------l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d 138 (252)
T 2z06_A 69 DHK-E------VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---AD 138 (252)
T ss_dssp SCT-T------HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CS
T ss_pred ECc-h------HHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CC
Confidence 642 1 1111111 11222211 11134567788877554 444443322122222334555555542 67
Q ss_pred eEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 306 WLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 306 ~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+||.+|.-.. ...+.+. ....-+||+|+.||+|....
T Consensus 139 ~IIv~~H~g~t-----------sek~~la-~~~dg~Vd~VvGgHTHv~t~ 176 (252)
T 2z06_A 139 YVLVEVHAEAT-----------SEKMALA-HYLDGRASAVLGTHTHVPTL 176 (252)
T ss_dssp EEEEEEECSCH-----------HHHHHHH-HHHBTTBSEEEEESSCSCBS
T ss_pred EEEEEeCCCcH-----------HHHHHHH-HhCCCCeEEEEcCCCCcCCC
Confidence 89999996321 1111122 22234699999999998544
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.1e-05 Score=78.59 Aligned_cols=48 Identities=17% Similarity=0.203 Sum_probs=29.0
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
.+.+.+|+++|...-........++. ... |.++ .+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~~~d~~~~~~e~~--~~~---lA~~v~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGIEKQAQSSGAENA--VFD---LATKTKGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCCCSSCCCTTCSSC--HHH---HHHHCSCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCccccccccccchh--HHH---HHhcCCCCcEEEECCCCccC
Confidence 56788999999987432211111111 112 2222 479999999999863
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.08 E-value=2.4e-05 Score=81.15 Aligned_cols=194 Identities=14% Similarity=0.119 Sum_probs=93.1
Q ss_pred ECCCCCC-CCCCeEEEEEecCCCCCCc-------------HHHH----HHHHhCCCCc-EEEEcCccccCCCCCCCchhH
Q 046207 144 TTPPKVG-PDVPYIFGIIGDLGQTYDS-------------NQTF----EHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRR 204 (458)
Q Consensus 144 ~T~p~~~-~~~~~~f~~~gD~~~~~~~-------------~~~l----~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~ 204 (458)
-++|.+. ....++|+.++|+|..... ...+ +++.+..+++ ++|.+||++....+......+
T Consensus 4 ~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~ 83 (557)
T 3c9f_A 4 ASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPN 83 (557)
T ss_dssp -CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSST
T ss_pred ccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccC
Confidence 3444332 3468999999999975211 1222 2222123677 579999999653200000001
Q ss_pred HHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCC--------CC---CCCceEEEEc--Ce-
Q 046207 205 WDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS--------QS---TSPLWYSIKR--AS- 270 (458)
Q Consensus 205 ~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--------~~---~~~~~ys~~~--g~- 270 (458)
.+...+.|+.+ -.=+.++||||+..... ....+........+|.-.. +. ....|..++. ++
T Consensus 84 g~~~~~~ln~l---g~Da~tlGNHEfD~G~~--~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~ 158 (557)
T 3c9f_A 84 GLKSTPIFIKQ---DYDLLTIGNHELYLWEN--SKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGI 158 (557)
T ss_dssp TTTTHHHHTTS---CCSEECCCGGGSSSHHH--HHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCC
T ss_pred CHHHHHHHHhc---CCCEEeecchhcccchH--HHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCE
Confidence 11122333332 23367899999864210 0001111111111221110 00 1123556777 66
Q ss_pred -EEEEEecCCCcCC------CChHH---HHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-
Q 046207 271 -AYIIVLSSYSAYG------KYTPQ---YAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ- 339 (458)
Q Consensus 271 -~~fi~Lds~~~~~------~~~~Q---~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~- 339 (458)
+-||++.+...-. ....+ .+|+++.++ .+.+.+|+++|.+..... .+ . ......+.+
T Consensus 159 kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA~~ 226 (557)
T 3c9f_A 159 RVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------GE-F-YQVHQYLRQF 226 (557)
T ss_dssp EEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------CH-H-HHHHHHHHHH
T ss_pred EEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC------cc-c-cHHHHHHHHh
Confidence 5666666542100 01112 246665443 457889999998863100 11 1 122223333
Q ss_pred -cCccE-EEeccccccc
Q 046207 340 -HKVDL-VVAGHVHSYE 354 (458)
Q Consensus 340 -~~Vdl-vl~GH~H~y~ 354 (458)
.++|+ +|+||.|...
T Consensus 227 ~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 227 FPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp CTTSEEEEEECSSCCEE
T ss_pred CCCCCEEEECCCCCCCC
Confidence 48994 9999999873
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00032 Score=67.93 Aligned_cols=47 Identities=21% Similarity=0.248 Sum_probs=28.3
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
.+.+.+|+++|...-........++.. . ++.+ -+||++|.||+|...
T Consensus 200 ~g~D~II~l~H~G~~~d~~~~~~en~~--~----~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGLSADPYQAMAENSV--Y----YLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCCCCSCCCTTCSCCH--H----HHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCccccccccccchhH--H----HHhhCCCCCEEEeCCCcccc
Confidence 568889999998873221110111111 1 1222 479999999999864
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00041 Score=71.63 Aligned_cols=173 Identities=15% Similarity=0.102 Sum_probs=85.8
Q ss_pred CeEEEEEecCCCCCC-----------------cHHH----HHHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHH
Q 046207 154 PYIFGIIGDLGQTYD-----------------SNQT----FEHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRF 211 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~-----------------~~~~----l~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~ 211 (458)
.++|+.++|+|..-. .... ++++.+. +++ ++|..||++....+ ....+.....+.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~-~~n~llldaGD~~qGs~~--~~~~~g~~~i~~ 79 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRA-EPNVLLLDAGDQYQGTIW--FTVYKGAEVAHF 79 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHH-CSSEEEEECSCCSCSSHH--HHHHTTHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhh-CcCeEEEEeCCcccchHH--HHHhCChHHHHH
Confidence 478999999985321 1122 3333333 444 78889999975420 000011112233
Q ss_pred HHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCC------------CCCCCceEEEEcCe--EEEEEec
Q 046207 212 VEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS------------QSTSPLWYSIKRAS--AYIIVLS 277 (458)
Q Consensus 212 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~------------~~~~~~~ys~~~g~--~~fi~Ld 277 (458)
|..+ -.=..++||||+++... .-...+.....+|.-.. ...-..|.-++.++ +-||++-
T Consensus 80 mN~l---gyDa~~lGNHEFd~G~~----~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGlt 152 (530)
T 4h1s_A 80 MNAL---RYDAMALGNHEFDNGVE----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 152 (530)
T ss_dssp HHHT---TCCEEECCGGGGTTTTH----HHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEE
T ss_pred Hhcc---CCCEEEEchhhhccCHH----HHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecccc
Confidence 3332 12267999999865321 00011111111221110 00112355677776 5567766
Q ss_pred CCCc-----------CCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEE
Q 046207 278 SYSA-----------YGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLV 345 (458)
Q Consensus 278 s~~~-----------~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlv 345 (458)
+... +...-+..+..-++|++ .+.+.+|++.|...-. .. .+.++. +||++
T Consensus 153 t~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~~------------d~---~la~~v~giD~I 214 (530)
T 4h1s_A 153 SKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFEM------------DK---LIAQKVRGVDVV 214 (530)
T ss_dssp CTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH------------HH---HHHHHSTTCCEE
T ss_pred ccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCchH------------HH---HHHhcCCCCCee
Confidence 5321 11112223333344544 5677899999965311 11 233333 79999
Q ss_pred Eeccccccc
Q 046207 346 VAGHVHSYE 354 (458)
Q Consensus 346 l~GH~H~y~ 354 (458)
|.||+|.+-
T Consensus 215 lgGHsH~~~ 223 (530)
T 4h1s_A 215 VGGHSNTFL 223 (530)
T ss_dssp ECCSSCCCB
T ss_pred ccCCcccee
Confidence 999999754
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00078 Score=53.67 Aligned_cols=90 Identities=26% Similarity=0.378 Sum_probs=57.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCC--ceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKR--KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..+.+.......+++.|+|..+.... .-.|+|....+.. ..... .. ..-...++|++|+|+
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~ 79 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIME----TI------SGDRLTHQIMDLNLD 79 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEE----EE------ETTCCEEEECSCCSS
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEE----EE------CCCceEEEEcCCCCC
Confidence 37888888876434579999999875332 2366776643321 11110 11 112235789999999
Q ss_pred CEEEEEeCC------CCccceEEEECCCCCCC
Q 046207 126 TKYFYQLGS------GNATRRFHFTTPPKVGP 151 (458)
Q Consensus 126 t~Y~Y~v~~------g~~~~~~~f~T~p~~~~ 151 (458)
|.|.+||.. |..+....|+|.+.+..
T Consensus 80 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 80 TMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp CEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred CEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 999999865 34456788999876543
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00013 Score=68.80 Aligned_cols=64 Identities=22% Similarity=0.274 Sum_probs=41.8
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++++++||+|.. ...+.++++. .++|.++++||+++.+. +.. ...+.+..+ ..+++.+.||||.
T Consensus 1 M~i~vigDiHG~---~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~----~s~---~~l~~l~~l--~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 1 MATYLIGDVHGC---YDELIALLHKVEFTPGKDTLWLTGDLVARGP----GSL---DVLRYVKSL--GDSVRLVLGNHDL 68 (280)
T ss_dssp -CEEEECCCCSC---HHHHHHHHHHTTCCTTTCEEEECSCCSSSSS----CHH---HHHHHHHHT--GGGEEECCCHHHH
T ss_pred CeEEEEecCCCC---HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCC----ccH---HHHHHHHhC--CCceEEEECCCcH
Confidence 478999999965 3334443332 36799999999998765 221 223333333 2379999999995
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00016 Score=67.67 Aligned_cols=62 Identities=24% Similarity=0.310 Sum_probs=40.6
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHh---CCCC-cEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVS---NPKG-QAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~---~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
.|++++||+|.. ...+.++++ ..++ |.+|++||+++.+. ... ...+.+.. .+++.+.||||.
T Consensus 19 ~~i~visDiHg~---~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~----~~~---~~l~~l~~----~~~~~v~GNHd~ 84 (262)
T 2qjc_A 19 GRVIIVGDIHGC---RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGP----DSF---GVVRLLKR----LGAYSVLGNHDA 84 (262)
T ss_dssp SCEEEECCCTTC---HHHHHHHHHHHTCCTTTSEEEECSCCSSSSS----CHH---HHHHHHHH----HTCEECCCHHHH
T ss_pred CeEEEEeCCCCC---HHHHHHHHHHHhccCCCCEEEEecCCCCCCC----CHH---HHHHHHHH----CCCEEEeCcChH
Confidence 489999999954 333443332 2244 99999999998764 221 12222322 479999999995
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0009 Score=54.60 Aligned_cols=83 Identities=20% Similarity=0.117 Sum_probs=54.7
Q ss_pred CCCCccEEEEecCCCCCceEEEEEcCCCCC--------CCeEEEEecCCCC--ceEEEEEEEEEEecccccceEEEEEec
Q 046207 51 FNAPEQVHITQGDHDGRSVIVSWVTPDEKY--------PNVVTHWEANSKR--KHKTHSIIKTYRYFNYSSGYIHHATIK 120 (458)
Q Consensus 51 ~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (458)
..+|..|++..-.. +++.|+|....... .-.|+|....... ...+.. ....++|+
T Consensus 19 p~~P~~l~~~~~s~--tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~ 83 (123)
T 2edd_A 19 MLPPVGVQAVALTH--DAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTAT 83 (123)
T ss_dssp SCCCEEEEEEEEET--TEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEE
T ss_pred CCCCcceEEEEcCC--CeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEec
Confidence 35788888766543 69999999654222 4468888753211 111111 12357899
Q ss_pred CCCCCCEEEEEeCC------CCccceEEEECCCC
Q 046207 121 RLKYDTKYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 121 gL~p~t~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
||+|+|.|.++|.. |..+....|+|.+.
T Consensus 84 gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 84 GLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 99999999999864 34556778999875
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0017 Score=51.15 Aligned_cols=82 Identities=20% Similarity=0.252 Sum_probs=52.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.......+++.|+|..+..... -.|+|....+..+..... . . ..++|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~--------~---~--~~~~l~~L~p~t~Y 76 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRA--------A---S--NFTEIKNLLVNTLY 76 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEEE--------S---S--SEEEECSCCSSCEE
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEecC--------C---c--cEEEeCCCCCCCEE
Confidence 78888776543234799999998753222 356666655433322211 1 1 25789999999999
Q ss_pred EEEeCC----C--CccceEEEECCC
Q 046207 129 FYQLGS----G--NATRRFHFTTPP 147 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~p 147 (458)
.+||.. | ..+....++|.+
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 77 TVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEECCCceeCCCCCEEEECCC
Confidence 999875 3 345577788854
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00051 Score=65.53 Aligned_cols=67 Identities=15% Similarity=0.173 Sum_probs=42.1
Q ss_pred eEEEEEecCCCCCCcHHHHHHHH---hCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCcc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYV---SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNHE 229 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD 229 (458)
.+++++||+|... ..+.++. .....+.++++||+++.+. +.. +....+..+.. ...++.+.||||
T Consensus 50 ~~i~viGDIHG~~---~~L~~ll~~~~~~~~~~~vflGD~VDRG~----~s~---evl~lL~~lk~~~p~~v~~lrGNHE 119 (309)
T 2ie4_C 50 CPVTVCGDVHGQF---HDLMELFRIGGKSPDTNYLFMGDYVDRGY----YSV---ETVTLLVALKVRYRERITILRGNHE 119 (309)
T ss_dssp SSEEEECCCTTCH---HHHHHHHHHHCCTTTSCEEECSCCSSSST----THH---HHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred CCEEEEecCCCCH---HHHHHHHHHcCCCCCCEEEEeCCccCCCC----ChH---HHHHHHHHHHhhCCCcEEEEeCCCC
Confidence 4699999999653 3333333 2225678899999999875 222 12233333322 234899999999
Q ss_pred cC
Q 046207 230 LD 231 (458)
Q Consensus 230 ~~ 231 (458)
..
T Consensus 120 ~~ 121 (309)
T 2ie4_C 120 SR 121 (309)
T ss_dssp ST
T ss_pred HH
Confidence 64
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0032 Score=49.74 Aligned_cols=83 Identities=18% Similarity=0.316 Sum_probs=52.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCc--eEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRK--HKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+.... .+++.|+|..+.... .-.|+|........ ....+ -...++|++|+|+|
T Consensus 13 ~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t 77 (111)
T 1x5l_A 13 QVVVIRQERAG--QTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKA-------------VTTRATVSGLKPGT 77 (111)
T ss_dssp CCCCEECSCBC--SSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEE-------------SSSEEEECSCCTTC
T ss_pred CCceEEEEEcC--CCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEecC-------------CCCEEEEcCCCCCC
Confidence 46666655433 369999998764322 23567766542211 11111 12346899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCCCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPPKVG 150 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p~~~ 150 (458)
.|.+||.. |..+....|+|++.++
T Consensus 78 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 107 (111)
T 1x5l_A 78 RYVFQVRARTSAGCGRFSQAMEVETGKPSG 107 (111)
T ss_dssp EEEECEEEEETTEECCCCCCEEEECCCTTS
T ss_pred EEEEEEEEEeCCcCCCCcccEEEEcCCCCC
Confidence 99999875 4456688899988654
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0041 Score=48.81 Aligned_cols=85 Identities=18% Similarity=0.197 Sum_probs=51.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+.... .+ +.|+|..+...+ .-.|+|.......+... ..... ...-...++|++|+|+|.
T Consensus 9 ~P~~~~~~~~~--~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~------~~~~~-~~~~~~~~~i~~L~p~t~ 78 (105)
T 2haz_A 9 SPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK------WYDAK-EASMEGIVTIVGLKPETT 78 (105)
T ss_dssp CCEEEEEEECS--SC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE------EEEHH-HHHHHSEEEECSCCTTCE
T ss_pred CCCCCEEEEcC--Cc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc------eEEcc-ccCCccEEEECCCCCCCE
Confidence 37666665443 24 999999774322 23577776654322111 00000 011223568999999999
Q ss_pred EEEEeCC------CCccceEEEECCC
Q 046207 128 YFYQLGS------GNATRRFHFTTPP 147 (458)
Q Consensus 128 Y~Y~v~~------g~~~~~~~f~T~p 147 (458)
|.+||.. |..+..-.|+|.|
T Consensus 79 Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 79 YAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCcCCEeeEEec
Confidence 9999875 4556677899987
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0019 Score=50.86 Aligned_cols=81 Identities=16% Similarity=0.143 Sum_probs=48.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+..-. .+++.|+|..+...+ .-.|+|....+.......+ ....++|++|+|+|.|
T Consensus 10 ~P~~~~~~~~s--~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~Y 74 (106)
T 1x4x_A 10 QCKPPQVTCRS--ATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATTY 74 (106)
T ss_dssp CCCCCCCEEEE--TTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCEE
T ss_pred CCCCCEEEEcC--CCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCEE
Confidence 44444444333 369999998765322 2356666544222111111 1124678999999999
Q ss_pred EEEeCC------CCccceEEEECCCC
Q 046207 129 FYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 129 ~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.+||.. |..+....++|.+.
T Consensus 75 ~frV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 75 YCRVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEEEcCCcCCCCcCCEEEECCCC
Confidence 999875 33456778999765
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0039 Score=49.69 Aligned_cols=88 Identities=10% Similarity=0.118 Sum_probs=52.8
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC--C----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE--K----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..|.+.... .+++.|+|..+.. . ..-.|+|............ ..... .-...++|++|+|+
T Consensus 10 ~~P~~~~~~~~~--~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~--~~~~~------~~~~~~~i~~L~p~ 79 (114)
T 1x4y_A 10 AGPYITFTDAVN--ETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYK--KDMVE------GDRYWHSISHLQPE 79 (114)
T ss_dssp SCCEEEEEECSS--SSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCC--CEEEE------TTCCEEEECSCCTT
T ss_pred CCCeEEEEEecC--CCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCccee--eEecC------CcEeEEEcCCCCCC
Confidence 367777766544 3799999997741 1 1236677654432100000 00000 01134789999999
Q ss_pred CEEEEEeCC------CCccceEEEECCCCC
Q 046207 126 TKYFYQLGS------GNATRRFHFTTPPKV 149 (458)
Q Consensus 126 t~Y~Y~v~~------g~~~~~~~f~T~p~~ 149 (458)
|.|.+||.. |..+....++|.+.+
T Consensus 80 t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~ 109 (114)
T 1x4y_A 80 TSYDIKMQCFNEGGESEFSNVMICETKARS 109 (114)
T ss_dssp CEEEEEEEEECTTCCCCCCCCEEEECCCCC
T ss_pred CEEEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence 999999864 445667889998754
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00087 Score=65.08 Aligned_cols=68 Identities=13% Similarity=0.045 Sum_probs=43.8
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHhCC-----------CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHH-----h
Q 046207 153 VPYIFGIIGDLGQTYDSNQTFEHYVSNP-----------KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS-----T 216 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~-----------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l-----~ 216 (458)
...+++++||+|.. ...+.++++.. ++|.+|++||+++.+. +.. .....+..+ .
T Consensus 69 ~~~~i~vigDiHG~---~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~----~s~---evl~~l~~l~~~~~~ 138 (342)
T 2z72_A 69 GIKKVVALSDVHGQ---YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGH----QVN---EVLWFMYQLDQQARD 138 (342)
T ss_dssp CCCEEEEECCCTTC---HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSS----CHH---HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCC---HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCC----CHH---HHHHHHHHHHHHHhh
Confidence 35799999999955 33344443311 4799999999998775 222 122222222 2
Q ss_pred hccceEEccCCccc
Q 046207 217 AYQAWIWVPGNHEL 230 (458)
Q Consensus 217 ~~~P~~~v~GNHD~ 230 (458)
...+++.+.||||.
T Consensus 139 ~~~~v~~v~GNHE~ 152 (342)
T 2z72_A 139 AGGMVHLLMGNHEQ 152 (342)
T ss_dssp TTCEEEECCCHHHH
T ss_pred CCCeEEEEecCCcH
Confidence 23469999999996
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00088 Score=64.39 Aligned_cols=66 Identities=20% Similarity=0.239 Sum_probs=41.5
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCcc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNHE 229 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD 229 (458)
.++.++||+|... ..+.++.+ ....|-+|++||+++.+. +.. +....+..+. ....++.+.||||
T Consensus 57 ~~i~viGDIHG~~---~~L~~ll~~~g~~~~~~~vflGD~VDRG~----~s~---evl~lL~~lk~~~p~~v~~lrGNHE 126 (330)
T 1fjm_A 57 APLKICGDIHGQY---YDLLRLFEYGGFPPESNYLFLGDYVDRGK----QSL---ETICLLLAYKIKYPENFFLLRGNHE 126 (330)
T ss_dssp SSEEEECBCTTCH---HHHHHHHHHHCSTTSSCEEECSCCSSSSS----CHH---HHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred CceEEecCCCCCH---HHHHHHHHHhCCCCcceEEeCCCcCCCCC----ChH---HHHHHHHHhhhhcCCceEEecCCch
Confidence 3689999999663 33333332 225678999999999875 222 1223333222 1235899999999
Q ss_pred c
Q 046207 230 L 230 (458)
Q Consensus 230 ~ 230 (458)
.
T Consensus 127 ~ 127 (330)
T 1fjm_A 127 C 127 (330)
T ss_dssp S
T ss_pred H
Confidence 5
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.012 Score=58.80 Aligned_cols=143 Identities=12% Similarity=0.109 Sum_probs=80.1
Q ss_pred CCCeEEEEEecCCCCCCcHH---HH---HHHHh-C----------CCCcEEEEcCccccCCCCCCC--------------
Q 046207 152 DVPYIFGIIGDLGQTYDSNQ---TF---EHYVS-N----------PKGQAVLFVGDLSYADDHPQH-------------- 200 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~~~---~l---~~~~~-~----------~~pd~vl~~GDl~y~~~~~~~-------------- 200 (458)
....+++++||+|.+..... .+ ..++. . .++..+|++||.+...+-..+
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 35679999999998865321 12 12221 1 168899999999987531000
Q ss_pred -chhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccC-CCCCCCCceEEEEcCeEEEEEecC
Q 046207 201 -DNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR-ASQSTSPLWYSIKRASAYIIVLSS 278 (458)
Q Consensus 201 -~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~-~~~~~~~~~ys~~~g~~~fi~Lds 278 (458)
.....+.+.+++..+...+|+...|||||-... ... +.++. ...|..... ..-..-..-|.|++++++|++...
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~-~lP-Qqplh--~~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsG 353 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY-TLP-QQPLH--PCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSG 353 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS-SSS-CCCCC--TTSCHHHHTSTTEEECCSSEEEEETTEEEEECSS
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcccc-cCC-CCCcC--HHHhhhhhhcCccEEeCCCeEEEECCEEEEEECC
Confidence 012345566777778889999999999995321 111 11111 011110000 000001234668899999988764
Q ss_pred CC-----cCCCChHHHHHHHHHhcc
Q 046207 279 YS-----AYGKYTPQYAWLEKELPK 298 (458)
Q Consensus 279 ~~-----~~~~~~~Q~~WL~~~L~~ 298 (458)
.. .|.....-++.+++.|+.
T Consensus 354 qnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 354 QNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred CCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 32 133345567888888876
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00088 Score=52.23 Aligned_cols=80 Identities=23% Similarity=0.325 Sum_probs=48.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCC--CCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPD--EKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~--~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+.... .+++.|+|..+. ... .-.|+|............+ + ...+.|++|+|+|
T Consensus 11 ~P~~l~~~~~~--~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~--------~-----~~~~~i~~L~p~t 75 (103)
T 2edy_A 11 FPQNLHVTGLT--TSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT--------T-----DTRFTLTGLKPDT 75 (103)
T ss_dssp CCEEEECSSBC--SSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE--------S-----SSCCEECSCCTTC
T ss_pred CCeeeEEEecC--CCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC--------C-----cceEEEcCCCCCC
Confidence 67666654433 379999998872 111 2356676655422211111 1 1235789999999
Q ss_pred EEEEEeCC----C--CccceEEEECCC
Q 046207 127 KYFYQLGS----G--NATRRFHFTTPP 147 (458)
Q Consensus 127 ~Y~Y~v~~----g--~~~~~~~f~T~p 147 (458)
.|.+||.. | ..+....|+|.|
T Consensus 76 ~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 76 TYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 99999975 3 334455666665
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0012 Score=52.99 Aligned_cols=84 Identities=14% Similarity=0.058 Sum_probs=52.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC--------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY--------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLK 123 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 123 (458)
.+|..|++..-.. +++.|+|..+.... .-.|+|.......... .+. ..-...++|+||+
T Consensus 10 ~~P~~l~~~~~s~--tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~------~~~-----~~~~~~~~i~gL~ 76 (113)
T 1x5j_A 10 MPPVGVQASILSH--DTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY------KNA-----NATTLSYLVTGLK 76 (113)
T ss_dssp CCCEEEEEEEEET--TEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCC------EEC-----CBCSSEEEEESCC
T ss_pred CCCcceEEEEecC--CEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEE------EEE-----ecCcCEEEeCCCC
Confidence 4788888876553 79999998764221 3456777632111100 000 0112357899999
Q ss_pred CCCEEEEEeCC------CCccceEEEECCCC
Q 046207 124 YDTKYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 124 p~t~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
|+|.|.++|.. |..+....++|.+.
T Consensus 77 P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 77 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 99999999875 34455667888764
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0036 Score=49.17 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=51.9
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
.+|..+++..-.. +++.|+|.-+.....-.|+|........... ..... . .- .++|+||+|+|.|.++
T Consensus 10 ~~P~~l~~~~~~~--~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~----~~~~~-~---~~--~~~l~~L~p~t~Y~~~ 77 (104)
T 2dkm_A 10 PPPRALTLAAVTP--RTVHLTWQPSAGATHYLVRCSPASPKGEEEE----REVQV-G---RP--EVLLDGLEPGRDYEVS 77 (104)
T ss_dssp CCCCCCEEEEECS--SEEEEECCCCSSCSEEEEEEEESSSCCSSCC----EEEEE-S---SS--EEEEESCCTTCCEEEE
T ss_pred CCCceeEEEecCC--CEEEEEEeCCCCCCeEEEEEEECCCCCCcce----EEEec-C---CC--EEEECCCCCCCEEEEE
Confidence 4788888775544 6999999766544334677776543211100 00000 1 11 6889999999999999
Q ss_pred eCC----CCcc-ceEEEECCCC
Q 046207 132 LGS----GNAT-RRFHFTTPPK 148 (458)
Q Consensus 132 v~~----g~~~-~~~~f~T~p~ 148 (458)
|.. |.+. ....++|.|.
T Consensus 78 V~A~~~~~~s~p~~~~~~T~p~ 99 (104)
T 2dkm_A 78 VQSLRGPEGSEARGIRARTPTS 99 (104)
T ss_dssp EEEECSSSBCCCEEEECCCCCC
T ss_pred EEEECCCCCCCCEEEEEEcCCC
Confidence 875 2222 2456777764
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0051 Score=49.27 Aligned_cols=85 Identities=21% Similarity=0.286 Sum_probs=53.6
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCC-CCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPD-EKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~-~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..+.+..... +++.|+|..+. ... .-.|+|........... .. ...-...++|++|+|+|
T Consensus 19 ~~P~~l~~~~~~~--~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~-------~~---~~~~~~~~~i~~L~p~t 86 (120)
T 1x5f_A 19 SAPRDVVASLVST--RFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE-------NT---SHPGEMQVTIQNLMPAT 86 (120)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEE-------EC---SSTTCSEEEECSCCTTC
T ss_pred CCCCCcEEEecCC--CEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEE-------Ee---ccCCccEEEeCCCCCCC
Confidence 3787887765543 69999998765 222 24677776643322111 00 01123457899999999
Q ss_pred EEEEEeCC----C--CccceEEEECCCC
Q 046207 127 KYFYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 127 ~Y~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
.|.+||.. | ..+....|+|.+.
T Consensus 87 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 87 VYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 99999875 3 2345678898764
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0076 Score=48.07 Aligned_cols=85 Identities=21% Similarity=0.285 Sum_probs=53.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+..... +++.|+|..+..... -.|+|............ . ...-...++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~~--~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-------~---~~~~~~~~~i~~L~p~t~ 86 (119)
T 2ed7_A 19 SAPRDVVPVLVSS--RFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN-------T---TQPGSLQLTVGNLKPEAM 86 (119)
T ss_dssp CCCSCCEEEEECS--SCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE-------C---CCTTCCEEEECSCCSSSE
T ss_pred cCCcceEEEecCC--CEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE-------e---ecCCceEEEeCCCCCCCE
Confidence 3787887776543 699999987653322 24566555433222110 0 011134578999999999
Q ss_pred EEEEeCC------CCccceEEEECCCC
Q 046207 128 YFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
|.+||.. |..+....++|.+.
T Consensus 87 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 87 YTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 9999875 33455778888763
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.003 Score=49.66 Aligned_cols=83 Identities=19% Similarity=0.310 Sum_probs=51.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+..... +++.|+|..+..... -.|+|............ .. .-...++|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~~--~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~l~~L~p~t~Y 76 (108)
T 2djs_A 10 TVPIMHQVSATM--RSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSM-----AR------SQTNTARIDGLRPGMVY 76 (108)
T ss_dssp CCSCCEEEEECS--SEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEE-----EE------ESSSEEEEESCCTTCEE
T ss_pred CCcceEEEecCC--CEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeE-----Ee------cCccEEEEcCCCCCCEE
Confidence 566666654443 699999988753332 24566655432221100 00 01134678999999999
Q ss_pred EEEeCC----C--CccceEEEECCCC
Q 046207 129 FYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
.+||.. | ..+....|+|.+.
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 77 VVQVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEEEEeCCEECCCCCCEEEEeCCC
Confidence 999875 3 3455778999875
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.006 Score=48.16 Aligned_cols=83 Identities=14% Similarity=0.177 Sum_probs=50.0
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+...- ..+++.|+|..+... ..-.|+|....+..+..+. . .....++|++|+|++.
T Consensus 11 ~P~~~~~~~~~-~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t~ 77 (110)
T 2crz_A 11 PCLPPRLQGRP-KAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q-----------GSEVECTVSSLLPGKT 77 (110)
T ss_dssp CCCCCEECSCC-CSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E-----------ESCSEEEEESCCTTCE
T ss_pred CCCCceecccc-CCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e-----------CCcEEEEECCcCCCCE
Confidence 56666663222 236999999765321 2246677655443333221 0 0123467899999999
Q ss_pred EEEEeCC------CCccceEEEECCCC
Q 046207 128 YFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
|.+||.. |..+..-.++|.+.
T Consensus 78 Y~frV~A~n~~G~g~~S~~~~~~T~~~ 104 (110)
T 2crz_A 78 YSFRLRAANKMGFGPFSEKCDITTAPG 104 (110)
T ss_dssp EEECCEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEEEEEcCCccCCCCCccccccCCC
Confidence 9999875 33455677888764
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0071 Score=48.07 Aligned_cols=82 Identities=20% Similarity=0.250 Sum_probs=52.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+++..... +++.|+|..+.... .-.|+|..........+... ...++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~~--~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~ 83 (116)
T 1x5g_A 19 GPAPNLRAYAASP--TSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTE 83 (116)
T ss_dssp CCCSSCEEEEEET--TEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCE
T ss_pred cCCCccEEEecCC--CEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEecC-------------CceEEEcCCCCCCE
Confidence 3677777765443 69999998764222 23677776554332211111 23568999999999
Q ss_pred EEEEeCC------CCccceEEEECCCC
Q 046207 128 YFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
|.+||.. |..+....|+|.+.
T Consensus 84 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 84 YSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 9999864 33455667888764
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.015 Score=46.04 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=52.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCce--EEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKH--KTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
.+|..+.+.--. .+++.|+|...... ..-.|+|....+.... .+.+. ...++|++|+|+|.|
T Consensus 9 ~pP~~l~~~~vt--~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~v~~~-------------~t~~~l~~L~p~T~Y 73 (108)
T 2ee3_A 9 APPRHLGFSDVS--HDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPGN-------------ATSAMLGPLSSSTTY 73 (108)
T ss_dssp CCSSCEEEESCC--SSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEEEETT-------------CCEEEECSCCSSCEE
T ss_pred CCCceEEEEEcc--CCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEEcCCC-------------cCEEEcCCCCCCCEE
Confidence 478888876443 47999999765322 3347788876543211 11111 134689999999999
Q ss_pred EEEeCC----CCcc-ceEEEECCCCC
Q 046207 129 FYQLGS----GNAT-RRFHFTTPPKV 149 (458)
Q Consensus 129 ~Y~v~~----g~~~-~~~~f~T~p~~ 149 (458)
..+|.. |.+. -...|+|.+.|
T Consensus 74 ~v~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 74 TVRVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp EEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred EEEEEEEeCCCcCCCccCEEEeCCCC
Confidence 999865 3322 14579997533
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0051 Score=49.33 Aligned_cols=86 Identities=21% Similarity=0.273 Sum_probs=52.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC--CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE--KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|..+.+..... +++.|+|..+.. ...-.|+|....+..... ..... .+-...++|++|+|+|.|.+
T Consensus 21 ~P~~l~~~~~~~--~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~---~~~~~------~~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 2ee2_A 21 APTEVGVKVLSS--SEISVHWEHVLEKIVESYQIRYWAAHDKEEAA---NRVQV------TSQEYSARLENLLPDTQYFI 89 (119)
T ss_dssp CCCSCEEEEEET--TEEEEECCCCSCTTCCEEEEEEEESSSCGGGC---EEEEE------ETTCSEEEECSCCTTCEEEE
T ss_pred CCCcEEEEEccC--CEEEEEecCCCCCccceEEEEEEECCCcccCc---EEEEc------CCCEeEEEECCCCCCCEEEE
Confidence 576777665443 699999987752 223467776654322110 00011 01123578999999999999
Q ss_pred EeCC------CCccceEEEECCCCC
Q 046207 131 QLGS------GNATRRFHFTTPPKV 149 (458)
Q Consensus 131 ~v~~------g~~~~~~~f~T~p~~ 149 (458)
||.. |..+....|+|.+.+
T Consensus 90 ~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 90 EVGACNSAGCGPPSDMIEAFTKKAS 114 (119)
T ss_dssp EEEEECSSSCCCCCCCEEEECCCCC
T ss_pred EEEEEcCCccCCCCCCEEEECCCCC
Confidence 9875 344556789987654
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0063 Score=47.60 Aligned_cols=81 Identities=15% Similarity=0.190 Sum_probs=51.6
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+..... +++.|+|..+... ..-.|+|............. . ...++|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~~--~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~--------~-----~~~~~i~~L~p~t~Y 74 (106)
T 2ed8_A 10 PVENLQAVSTSP--TSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEV--------D-----GLSYKLEGLKKFTEY 74 (106)
T ss_dssp CCEEEEEECSST--TEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEEE--------C-----SSCEEEESCCTTCEE
T ss_pred CCceeEEEecCC--CEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEeC--------C-----ccEEEECCCCCCCEE
Confidence 687777765443 6999999977422 22366776655432221110 1 134678999999999
Q ss_pred EEEeCC----C--CccceEEEECCCC
Q 046207 129 FYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
.+||.. | ..+....++|.+.
T Consensus 75 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 75 SLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 999875 3 3345678888653
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0019 Score=62.31 Aligned_cols=68 Identities=16% Similarity=0.165 Sum_probs=40.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~ 230 (458)
+++++||+|........+-+.......+-+|++||+++.+. +.. + ....+..+.. ...++.+.||||.
T Consensus 71 pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~----~s~--E-vl~lL~~lk~~~p~~v~llrGNHE~ 140 (357)
T 3ll8_A 71 PVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGY----FSI--E-CVLYLWALKILYPKTLFLLRGNHEC 140 (357)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSST----THH--H-HHHHHHHHHHHCTTTEEECCCTTSS
T ss_pred cceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCc----ChH--H-HHHHHHHhhhhcCCcEEEEeCchhh
Confidence 58999999976322222222222336688999999999875 221 1 1222222221 2348899999995
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0056 Score=48.30 Aligned_cols=82 Identities=20% Similarity=0.298 Sum_probs=52.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCC--Cc-eEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSK--RK-HKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
+|..+++..-.. +++.|+|..+.... .-.|+|....+. .. ..+.. .. ..++|++|+|+
T Consensus 10 ~p~~l~~~~~~~--~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~-----------~~--~~~~i~~L~p~ 74 (109)
T 2e7h_A 10 AVSDIRVTRSSP--SSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKT-----------SE--NRAELRGLKRG 74 (109)
T ss_dssp CCCCCEEEEEET--TEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEEE-----------SS--SEEEEESCCTT
T ss_pred CCCccEEEecCC--CEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEcc-----------CC--CEEEECCCCCC
Confidence 466677665443 69999998774322 236777765411 11 11111 11 15789999999
Q ss_pred CEEEEEeCC------CCccceEEEECCCCC
Q 046207 126 TKYFYQLGS------GNATRRFHFTTPPKV 149 (458)
Q Consensus 126 t~Y~Y~v~~------g~~~~~~~f~T~p~~ 149 (458)
|.|.+||.. |..+....|+|.+.+
T Consensus 75 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 75 ASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp SCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred CeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 999999875 445567789998753
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0037 Score=60.04 Aligned_cols=68 Identities=15% Similarity=0.111 Sum_probs=41.6
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHh---CCC-CcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccC
Q 046207 153 VPYIFGIIGDLGQTYDSNQTFEHYVS---NPK-GQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPG 226 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~~~~l~~~~~---~~~-pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~G 226 (458)
...+++++||+|... ..+.++.+ ... -+.+|++||+++.+. +.. +....+..+.. ...++.+.|
T Consensus 62 ~~~ri~viGDIHG~~---~~L~~ll~~~g~~~~~~~~vflGD~VDRG~----~s~---evl~lL~~lk~~~p~~v~llrG 131 (335)
T 3icf_A 62 PDVKISVCGDTHGQF---YDVLNLFRKFGKVGPKHTYLFNGDFVDRGS----WSC---EVALLFYCLKILHPNNFFLNRG 131 (335)
T ss_dssp TTCEEEEECCCTTCH---HHHHHHHHHHCCCBTTEEEEECSCCSSSST----THH---HHHHHHHHHHHHCTTTEEECCC
T ss_pred cCceEEEEecCCCCH---HHHHHHHHHcCCCCCCcEEEEeCCccCCCc----ChH---HHHHHHHHHhhhCCCcEEEecC
Confidence 457999999998763 33333332 212 246999999999875 221 11222222221 235889999
Q ss_pred Cccc
Q 046207 227 NHEL 230 (458)
Q Consensus 227 NHD~ 230 (458)
|||.
T Consensus 132 NHE~ 135 (335)
T 3icf_A 132 NHES 135 (335)
T ss_dssp TTSS
T ss_pred chhh
Confidence 9995
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0024 Score=60.40 Aligned_cols=65 Identities=20% Similarity=0.254 Sum_probs=40.6
Q ss_pred EEEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~ 230 (458)
+++++||+|... ..+.++.+ ....+-+|++||+++.+. +..+ ....+..+. ....++.+.||||.
T Consensus 57 ~i~viGDIHG~~---~~L~~ll~~~g~~~~~~~vfLGD~VDrG~----~s~e---vl~lL~~lk~~~p~~v~~lrGNHE~ 126 (299)
T 3e7a_A 57 PLKICGDIHGQY---YDLLRLFEYGGFPPESNYLFLGDYVDRGK----QSLE---TICLLLAYKIKYPENFFLLRGNHEC 126 (299)
T ss_dssp SEEEECBCTTCH---HHHHHHHHHHCSTTSSCEEECSCCSSSSS----CHHH---HHHHHHHHHHHSTTTEEECCCTTSS
T ss_pred CEEEEecCCCCH---HHHHHHHHHhCCCCCccEEeCCcccCCCC----CcHH---HHHHHHHHHhhCCCcEEEEecCchh
Confidence 589999999763 33333332 235678999999999876 3211 122222222 22358999999995
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0057 Score=49.14 Aligned_cols=74 Identities=20% Similarity=0.367 Sum_probs=45.9
Q ss_pred CCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC----CCc
Q 046207 66 GRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS----GNA 137 (458)
Q Consensus 66 ~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----g~~ 137 (458)
.+++.|+|......++ -.|+|.......+..... .. +-...++|.+|+|++.|.+||.. |.+
T Consensus 21 ~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----~~------~~~~~~~l~~L~p~t~Y~frV~A~N~~G~s 90 (114)
T 2kbg_A 21 GKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----VQ------GNKDHIILEHLQWTMGYEVQITAANRLGYS 90 (114)
T ss_dssp TTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----EE------TTTCCEEECCCCTTCCEEEEEEEECTTSCE
T ss_pred CCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----cC------CCcCEEEEcCCCCCCEEEEEEEEEeCCcCc
Confidence 4799999975432222 377888864433332111 11 11124679999999999999875 433
Q ss_pred c-ceEEEECCCCC
Q 046207 138 T-RRFHFTTPPKV 149 (458)
Q Consensus 138 ~-~~~~f~T~p~~ 149 (458)
. ....|+|.+.+
T Consensus 91 ~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 91 EPTVYEFSMPPKP 103 (114)
T ss_dssp EEEEEEECCCCCC
T ss_pred CCcCCEEEcCCCC
Confidence 2 25689997653
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.018 Score=45.00 Aligned_cols=83 Identities=20% Similarity=0.238 Sum_probs=50.0
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCC-CceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSK-RKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|..+.+..-. .+++.|+|.-+... ..-.|+|...... ..... ... .-...++|+||+|+|.|.+
T Consensus 5 ~P~~l~v~~~t--~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~v~------~~~~~~~l~~L~p~t~Y~~ 71 (104)
T 2rb8_A 5 APSQIEVKDVT--DTTALITWMPPSQPVDGFELTYGIKDVPGDRTTI-----DLT------EDENQYSIGNLKPDTEYEV 71 (104)
T ss_dssp CCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE-----EEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCccEEEEec--CCeEEEEEcCCCCccceEEEEEEECcCCCceEEE-----EcC------CCcCEEEeCCCCCCCEEEE
Confidence 67777776533 47999999876422 2246778765321 11111 111 1123468999999999999
Q ss_pred EeCC----CCc-cceEEEECCCC
Q 046207 131 QLGS----GNA-TRRFHFTTPPK 148 (458)
Q Consensus 131 ~v~~----g~~-~~~~~f~T~p~ 148 (458)
+|.. |.+ .....|+|.+.
T Consensus 72 ~V~A~~~~g~s~p~~~~~~T~~~ 94 (104)
T 2rb8_A 72 SLISRRGDMSSNPAKETFTTGLA 94 (104)
T ss_dssp EEEEEETTEECCCEEEEEECCC-
T ss_pred EEEEEeCCccCCCEEEEEECCCC
Confidence 9875 222 22567888775
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0083 Score=47.34 Aligned_cols=82 Identities=16% Similarity=0.322 Sum_probs=49.7
Q ss_pred CCccEEEEecCCCCCceEEEE--EcCCCCC---CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSW--VTPDEKY---PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W--~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+++..... +++.|+| ..+.... .-.|+|....+ . ..+... ... ++|++|+|+|.
T Consensus 12 ~p~~l~~~~~~~--~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~--~-------~~~~~~-~~~-----~~i~~L~p~t~ 74 (107)
T 1x5a_A 12 SGLSLKLVKKEP--RQLELTWAGSRPRNPGGNLSYELHVLNQDE--E-------WHQMVL-EPR-----VLLTKLQPDTT 74 (107)
T ss_dssp CSCCCCEEEEET--TEEEEECCCCCSSCCSSCCEEEEEEECSSC--E-------EEEEES-SSE-----EEEESCCSSCE
T ss_pred CCCceEEEecCC--CEEEEEECCCCCCCCCCceEEEEEEEeCCC--C-------ceEEEe-cce-----EEECCCCCCCE
Confidence 344555554433 6999999 6654221 23556655411 0 011111 111 78999999999
Q ss_pred EEEEeCC------CCccceEEEECCCCCCC
Q 046207 128 YFYQLGS------GNATRRFHFTTPPKVGP 151 (458)
Q Consensus 128 Y~Y~v~~------g~~~~~~~f~T~p~~~~ 151 (458)
|.+||.. |..+....|+|.+.++.
T Consensus 75 Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 75 YIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 9999875 44566778999886543
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0021 Score=64.73 Aligned_cols=69 Identities=16% Similarity=0.141 Sum_probs=41.3
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~ 230 (458)
.+++++||+|........+-++......+-+|++||+++.+. +..+ ....+..+.. .-.++.+.||||.
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp----~S~E---vl~lL~aLk~~~P~~v~lLRGNHE~ 153 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGY----FSIE---CVLYLWALKILYPKTLFLLRGNHEC 153 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSS----CHHH---HHHHHHHHHHHSTTTEEECCCTTSS
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCC----CHHH---HHHHHHHHhhhCCCeEEEecCCccH
Confidence 358999999966322222222233335688999999999876 3221 1222222221 2348899999995
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0036 Score=59.60 Aligned_cols=67 Identities=15% Similarity=0.130 Sum_probs=40.9
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHh---CC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCC
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYVS---NP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGN 227 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~~---~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GN 227 (458)
..+++++||+|... ..+.++.+ .. ..+.++++||+++.+. +.. + ....+..+.. ...++.+.||
T Consensus 59 ~~ri~viGDIHG~~---~~L~~ll~~~g~~~~~~~~vflGD~VDRG~----~s~--e-vl~lL~~lk~~~p~~v~~lrGN 128 (315)
T 3h63_A 59 TEKITVCGDTHGQF---YDLLNIFELNGLPSETNPYIFNGDFVDRGS----FSV--E-VILTLFGFKLLYPDHFHLLRGN 128 (315)
T ss_dssp TCEEEEECCCTTCH---HHHHHHHHHHCCCBTTBCEEEESCCSSSST----THH--H-HHHHHHHHHHHSTTTEEEECCT
T ss_pred CceEEEEecCCCCH---HHHHHHHHHhCCCCCCCEEEEeCCccCCCc----ChH--H-HHHHHHHhhhhcCCcEEEEecC
Confidence 46899999999663 33333332 21 3356999999999875 221 1 1222222221 2358889999
Q ss_pred ccc
Q 046207 228 HEL 230 (458)
Q Consensus 228 HD~ 230 (458)
||.
T Consensus 129 HE~ 131 (315)
T 3h63_A 129 HET 131 (315)
T ss_dssp TSS
T ss_pred ccc
Confidence 995
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0022 Score=53.34 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=27.3
Q ss_pred EEEEecCCCCCCEEEEEeCC------CCccceEEEECCCC
Q 046207 115 HHATIKRLKYDTKYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 115 ~~~~l~gL~p~t~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
-.++|+||+|+|.|..||.. |..|..-.|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 45789999999999999965 45566678999864
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.49 E-value=0.011 Score=47.24 Aligned_cols=91 Identities=15% Similarity=0.090 Sum_probs=52.9
Q ss_pred CCCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCc----eEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 51 FNAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRK----HKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 51 ~~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
..+|.+++++--. .++++|+|..+... ..-.|+|....+... ..-........ +-.-.++|+||+|+
T Consensus 9 pp~p~~L~v~~~T--~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~------~~~t~~~l~gL~Pg 80 (112)
T 2cui_A 9 RPRLSQLSVTDVT--TSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVP------GTRHSAVLRDLRSG 80 (112)
T ss_dssp CCCCCCCEEESCC--SSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEE------TTCCEEEECSCCTT
T ss_pred CCCCCceEEEeec--CCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEEcC------CCcCEEEeCCCCCC
Confidence 4567787777544 46999999876432 345788876543200 00000001111 11235789999999
Q ss_pred CEEEEEeCC--C-Ccc--ceEEEECCCCC
Q 046207 126 TKYFYQLGS--G-NAT--RRFHFTTPPKV 149 (458)
Q Consensus 126 t~Y~Y~v~~--g-~~~--~~~~f~T~p~~ 149 (458)
|.|..+|.. + ..+ -....+|.+.+
T Consensus 81 T~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 81 TLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp CEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred CEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 999999865 2 222 25577777653
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.012 Score=45.63 Aligned_cols=83 Identities=13% Similarity=0.158 Sum_probs=51.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC--CCCCeEEEEecCCC-CceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE--KYPNVVTHWEANSK-RKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
.+|..+.+..... +++.|+|..... ...-.|+|...... .+..+.. .....++|++|+|+|.|
T Consensus 9 ~~P~~~~~~~~~~--~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~t~Y 74 (106)
T 2dju_A 9 KPPIDLVVTETTA--TSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDG------------VATTRYSIGGLSPFSEY 74 (106)
T ss_dssp CCCEEEEEEEEET--TEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCC------------CCSSEEEEESCCTTCEE
T ss_pred cCCCCcEEEeccC--CEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccC------------CCccEEEEeCCCCCcEE
Confidence 3677777765443 699999997631 12346677665432 1111110 01123578999999999
Q ss_pred EEEeCC----C--CccceEEEECCCC
Q 046207 129 FYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
.|||.. | ..+....++|.+.
T Consensus 75 ~~~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 75 AFRVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEEEEeCCccCCCcccEEeEcCCC
Confidence 999875 3 3345667888764
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=96.41 E-value=0.022 Score=44.45 Aligned_cols=82 Identities=12% Similarity=0.112 Sum_probs=50.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC------CCCCeEEEEecCCCC--ceEEEEEEEEEEecccccceEEEEEecCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE------KYPNVVTHWEANSKR--KHKTHSIIKTYRYFNYSSGYIHHATIKRLK 123 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 123 (458)
.+|..+.+..-.. +++.|+|..+.. ...-.|.|....... ... ..... . . ...++|++|+
T Consensus 6 ~~P~~~~~~~~s~--tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~----~~~v~--~--~--~~~~~l~~L~ 73 (102)
T 3n1f_C 6 TGPHIAYTEAVSD--TQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYK----RDVVE--G--S--KQWHMIGHLQ 73 (102)
T ss_dssp SCCEEEEEEECSS--SCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCE----EEEEE--T--T--CSEEEECSCC
T ss_pred CCCceeEEEEcCC--CEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceE----EEEEc--C--C--ceEEECCCCC
Confidence 3788877765443 699999987642 112367888765321 111 01111 1 1 1235899999
Q ss_pred CCCEEEEEeCC------CCccceEEEEC
Q 046207 124 YDTKYFYQLGS------GNATRRFHFTT 145 (458)
Q Consensus 124 p~t~Y~Y~v~~------g~~~~~~~f~T 145 (458)
|+|.|..+|.. |..|....++|
T Consensus 74 p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 74 PETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred CCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 99999999875 44455666666
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0043 Score=63.08 Aligned_cols=67 Identities=15% Similarity=0.085 Sum_probs=41.4
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHh---CC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHH--hhccceEEccCC
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYVS---NP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS--TAYQAWIWVPGN 227 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~~---~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l--~~~~P~~~v~GN 227 (458)
..+++++||+|.. ...+.++.+ .. ..|.+|++||+++.+. +.. +. ...+..+ .....++.+.||
T Consensus 212 ~~~~~vigDiHG~---~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~----~s~--e~-~~~l~~l~~~~~~~~~~lrGN 281 (477)
T 1wao_1 212 TEKITVCGDTHGQ---FYDLLNIFELNGLPSETNPYIFNGDFVDRGS----FSV--EV-ILTLFGFKLLYPDHFHLLRGN 281 (477)
T ss_dssp SCEEEEECBCTTC---HHHHHHHHHHHCCCBTTBCEEEESCCSSSST----THH--HH-HHHHHHHHHHSTTTEEEECCT
T ss_pred CcceEEEeCCCCC---HHHHHHHHHHcCCCCCcCeEEEeccccCCCc----chH--HH-HHHHHHHHhhCCCceEeecCC
Confidence 4799999999965 333333332 21 2356999999999875 221 11 2222222 224578999999
Q ss_pred ccc
Q 046207 228 HEL 230 (458)
Q Consensus 228 HD~ 230 (458)
||.
T Consensus 282 HE~ 284 (477)
T 1wao_1 282 HET 284 (477)
T ss_dssp TSS
T ss_pred ccH
Confidence 994
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.054 Score=41.81 Aligned_cols=70 Identities=20% Similarity=0.242 Sum_probs=44.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.+..-. .+++.|+|.-+... ..-.|+|........... ... ..-.-.++|++|+|+|.|.+|
T Consensus 4 ~P~~l~~~~~~--~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~----~~~------~~~~t~~~i~~L~p~t~Y~~~ 71 (100)
T 3b83_A 4 PPFNIKVTNIT--LTTAVVTWQPPILPIEGILVTFGRKNDPSDETT----VDL------TSSITSLTLTNLEPNTTYEIR 71 (100)
T ss_dssp CCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEEESSCTTTCEE----EEE------CTTEEEEEECSCCTTCEEEEE
T ss_pred cCCccEEEEec--CCEEEEEEcCCcccCCEEEEEEEECCCCCCceE----EEE------CCcceEEEECCCCCCCEEEEE
Confidence 67777776533 47999999876432 234677876543211110 000 122345789999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 72 V~A 74 (100)
T 3b83_A 72 IVA 74 (100)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.035 Score=43.61 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=47.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+++.--. .+++.++|..+..... -.|+|..... .. ... .-.-.++|+||+|+|.|
T Consensus 10 ~v~~l~v~~~t--~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--~~-------~~~------~~~t~~~i~gL~PgT~Y 72 (104)
T 2dle_A 10 QVFDVTAVNIS--ATSLTLIWKVSDNESSSNYTYKIHVAGETD--SS-------NLN------VSEPRAVIPGLRSSTFY 72 (104)
T ss_dssp BEEEEEEEEEC--SSCEEEEEEESCSTTCCSCEEEEEEECSSC--EE-------EEE------ESSSEEECCSCCSSCEE
T ss_pred CCceEEEEEee--cCEEEEEEcCCCCCCCceEEEEEEEECCCC--eE-------EEc------CCCCEEEECCCCCCCEE
Confidence 45556665444 3699999987643322 4566654321 11 111 01235789999999999
Q ss_pred EEEeCC--CC-c--cceEEEECCCCC
Q 046207 129 FYQLGS--GN-A--TRRFHFTTPPKV 149 (458)
Q Consensus 129 ~Y~v~~--g~-~--~~~~~f~T~p~~ 149 (458)
.++|.. |. . +....++|.|.|
T Consensus 73 ~~~V~A~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 73 NITVCPVLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp EEEEEEESSSCCCBCEEEEEECCCCS
T ss_pred EEEEEEEECCcccCCeeEEEEccCCC
Confidence 999875 22 1 225667887754
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0045 Score=49.15 Aligned_cols=72 Identities=15% Similarity=0.247 Sum_probs=44.6
Q ss_pred CCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC----C--
Q 046207 66 GRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS----G-- 135 (458)
Q Consensus 66 ~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----g-- 135 (458)
.+++.|+|..+...+ .-.|+|.......+..+. . +....++|++|+|+|.|.|||.. |
T Consensus 24 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~------~------~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s 91 (110)
T 2db8_A 24 NNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY------V------GKETMCTVDGLHFNSTYNARVKAFNKTGVS 91 (110)
T ss_dssp SSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE------E------ESCSCEEEECCCSSSCCEEEEEEECSSCBC
T ss_pred CCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE------e------CCcCEEEECCCCCCCEEEEEEEEEeCCcCC
Confidence 379999998765332 235677654332222111 0 01123578999999999999875 3
Q ss_pred CccceEEEECCCCC
Q 046207 136 NATRRFHFTTPPKV 149 (458)
Q Consensus 136 ~~~~~~~f~T~p~~ 149 (458)
..+....++|.+.+
T Consensus 92 ~~S~~~~~~T~~~p 105 (110)
T 2db8_A 92 PYSKTLVLQTSEGS 105 (110)
T ss_dssp CCCSCEECCCCCCC
T ss_pred CCCCCEEEEcCCCC
Confidence 34567788888754
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.012 Score=46.25 Aligned_cols=71 Identities=24% Similarity=0.329 Sum_probs=43.2
Q ss_pred CceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC----CC-
Q 046207 67 RSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS----GN- 136 (458)
Q Consensus 67 ~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----g~- 136 (458)
+++.|+|..+...+ .-.|+|........... .+.. . ...+++++|+|+|.|.|||.. |.
T Consensus 22 ~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~~~----~--~~~~~v~~L~p~t~Y~frV~A~n~~G~s 90 (109)
T 1x5x_A 22 TWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKP-----KYDG----E--DLAYTVKNLRRSTKYKFKVIAYNSEGKS 90 (109)
T ss_dssp SEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEE-----EEEE----S--CSEEEEESCCSSCEEEEEEEEECSSCEE
T ss_pred CEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEE-----eEeC----C--ccEEEECCCCCCCEEEEEEEEEeCCCCc
Confidence 69999998764332 23566765543212111 0110 0 124678999999999999875 32
Q ss_pred -ccceEEEECCCC
Q 046207 137 -ATRRFHFTTPPK 148 (458)
Q Consensus 137 -~~~~~~f~T~p~ 148 (458)
.+....++|.+.
T Consensus 91 ~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 91 NPSEVVEFTTCPD 103 (109)
T ss_dssp EECCCEEEECCCC
T ss_pred CCccCEEeEeCCC
Confidence 345667888764
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.01 Score=48.24 Aligned_cols=85 Identities=18% Similarity=0.300 Sum_probs=52.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+++..... +++.|+|..+.... .-.|+|.......... . .... ..-...++|++|+|+|.|
T Consensus 30 ~P~~l~~~~~~~--~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~--~~~~------~~~~~~~~i~~L~p~t~Y 98 (130)
T 1wfo_A 30 PPMGILFPEVRT--TSVRLIWQPPAAPNGIILAYQITHRLNTTTANTA-T--VEVL------APSARQYTATGLKPESVY 98 (130)
T ss_dssp CCCCCEEEEECS--SEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCC-C--EEEE------CTTCCEEEEESCCSSSEE
T ss_pred CCCceEEEecCC--CEEEEEEcCCCCCCCceEEEEEEEEECCCCCceE-E--EEEe------CCCceEEEEcCCCCCCEE
Confidence 777777776543 69999998764322 2356776654321100 0 0010 112345788999999999
Q ss_pred EEEeCC----C--CccceEEEECCCC
Q 046207 129 FYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
.+||.. | ..+....|+|.+.
T Consensus 99 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 99 LFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEEeCCcCCCCcccEEEecCCC
Confidence 999875 3 3345667888764
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.025 Score=43.95 Aligned_cols=69 Identities=20% Similarity=0.248 Sum_probs=44.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC---CCCCeEEEEecCCCC-ceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE---KYPNVVTHWEANSKR-KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~---~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+++..-.+ +++.|+|..+.. ...-.|+|....+.. .... ... .-...++|+||+|+|.|
T Consensus 7 ~P~~l~v~~~t~--~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~-----~v~------~~~t~~~l~~L~p~t~Y 73 (101)
T 3k2m_C 7 VPTKLEVVAATP--TSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEF-----TVP------YSSSTATISGLSPGVDY 73 (101)
T ss_dssp SSCEEEEEEEET--TEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEE-----EEE------TTCCEEEECSCCTTCEE
T ss_pred CCcceEEeecCC--CEEEEEecCCCCCCceeeEEEEEEECCCCCccEEE-----EcC------CCccEEEECCCCCCCEE
Confidence 688888875443 699999987651 122367887754321 1111 111 11235789999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.++|..
T Consensus 74 ~~~V~A 79 (101)
T 3k2m_C 74 TITVYA 79 (101)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.022 Score=46.39 Aligned_cols=83 Identities=17% Similarity=0.309 Sum_probs=50.1
Q ss_pred CCCc-cEEEEecCCCCCceEEEEEcCCCCC-CC-eEEEEecCC-----------CCceEEEEEEEEEEecccccceEEEE
Q 046207 52 NAPE-QVHITQGDHDGRSVIVSWVTPDEKY-PN-VVTHWEANS-----------KRKHKTHSIIKTYRYFNYSSGYIHHA 117 (458)
Q Consensus 52 ~~p~-~v~~~~~~~~~~~~~i~W~t~~~~~-~~-~v~y~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (458)
.+|. .+.+..-.+ ++++|+|..+...+ .. .|+|....+ ..+..+.. . . ....
T Consensus 17 ~~P~~~~~~~~~~~--~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~----~------~--~~~~ 82 (127)
T 2dmk_A 17 NPPSIREELCTASH--DTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN----I------K--QNHY 82 (127)
T ss_dssp CCCEEEEEEEEEET--TEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE----E------C--SSEE
T ss_pred cCCCCCCEEEeeeC--CEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec----c------c--CCeE
Confidence 4676 666665443 69999999886332 22 677865211 11222111 0 0 1135
Q ss_pred EecCCCCCCEEEEEeCC----CC-ccceEEEECCCC
Q 046207 118 TIKRLKYDTKYFYQLGS----GN-ATRRFHFTTPPK 148 (458)
Q Consensus 118 ~l~gL~p~t~Y~Y~v~~----g~-~~~~~~f~T~p~ 148 (458)
+++||+|+|.|.|||.. |. .+..-.++|.+.
T Consensus 83 ~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 83 TVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred EECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 78899999999999975 43 234667888764
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.025 Score=44.82 Aligned_cols=86 Identities=16% Similarity=0.220 Sum_probs=52.3
Q ss_pred CCCCCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCC
Q 046207 49 PGFNAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124 (458)
Q Consensus 49 ~~~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 124 (458)
.+..+|..+.+... .+++.++|.-+.... .-.|+|... +..+..+... + ..-..++++.+|+|
T Consensus 6 ep~~pP~~l~v~~~---~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~~---~------~~~~t~~~v~~L~p 72 (108)
T 1v5j_A 6 SGLSPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDPA---V------AGTETELLVPGLIK 72 (108)
T ss_dssp CCCCCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEEE---E------CSSCCEEECCCCCT
T ss_pred CCCCCCcceEEEEe---CCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeeee---c------CCCcCEEEeCCCCC
Confidence 33458888887642 368999999875322 236788873 3334332211 1 11123467999999
Q ss_pred CCEEEEEeCC----C--CccceEEEECCC
Q 046207 125 DTKYFYQLGS----G--NATRRFHFTTPP 147 (458)
Q Consensus 125 ~t~Y~Y~v~~----g--~~~~~~~f~T~p 147 (458)
++.|.+||.. | ..|+...++|..
T Consensus 73 g~~Y~FRV~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 73 DVLYEFRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp TSCEECCBEEEETTEEEEECSCCCCCCSS
T ss_pred CCEEEEEEEEEcCCCCcCCCCCEEEEeCC
Confidence 9999999875 2 223444555554
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.039 Score=41.44 Aligned_cols=66 Identities=24% Similarity=0.320 Sum_probs=40.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
.+|..+.+.... .+++.++|..+.. ......|....+. .. . +. . . . -..++++|+|+++|+||
T Consensus 5 ~~P~~l~~~~~~--~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~~-~-~~---~---~---~--~~~~~~~L~~~t~Y~~~ 67 (88)
T 1k85_A 5 TAPTNLASTAQT--TSSITLSWTASTD-NVGVTGYDVYNGT-AL-A-TT---V---T---G--TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CSSEEEEEEEESS-SE-E-EE---E---S---S--SEEEECCCCSSCEEEEE
T ss_pred CCCCccEEEecc--CCEEEEEECCCCC-CCCccEEEEEECC-EE-E-ee---c---C---C--CEEEeCCCCCCCEEEEE
Confidence 367777776544 3699999987642 2345555543221 11 1 11 0 1 1 13568999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 68 V~A 70 (88)
T 1k85_A 68 VKA 70 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.011 Score=47.23 Aligned_cols=88 Identities=18% Similarity=0.213 Sum_probs=53.0
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC--C----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE--K----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+.... .+++.|+|..+.. . ..-.|+|........... .... ....+-...++|++|+|+|
T Consensus 18 ~P~~~~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~i~~L~p~t 89 (122)
T 1va9_A 18 PPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY--SIVE----MKATGDSEVYTLDNLKKFA 89 (122)
T ss_dssp CCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC--BCCB----CCCCSSEEEEEEESCCSSC
T ss_pred CCcceEEEecc--CCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce--EEEE----EecCCceeEEEeCCCCCCC
Confidence 67777776544 3699999998753 1 123667766543211000 0000 0011234567899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.|.+||.. |..+....|+|.+.
T Consensus 90 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 90 QYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp CEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 99999875 34455677888654
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.042 Score=44.18 Aligned_cols=86 Identities=17% Similarity=0.184 Sum_probs=49.4
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCC-----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYP-----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+.... .+ +.|+|..+...+. -.|+|.......+... +.... ...-...++|++|+|+|.
T Consensus 10 ~P~~~~~~~~~--~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~------~~~~~-~~~~~~~~~i~~L~p~t~ 79 (122)
T 2e3v_A 10 SPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK------WYDAK-EASMEGIVTIVGLKPETT 79 (122)
T ss_dssp CCEEEEEEECS--SC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEE------EEEHH-HHHTTTEEEECSCCTTCE
T ss_pred CCCccEEEecC--Cc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccc------eeeee-ecCccceEEeCCCCCCCE
Confidence 37666665543 24 9999997743322 2456665543322111 10000 001123568999999999
Q ss_pred EEEEeCC------CCccceEEEECCCC
Q 046207 128 YFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
|.+||.. |..+....|+|.|.
T Consensus 80 Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 80 YAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred EEEEEEEEeCCccCCCcccccccccCC
Confidence 9999875 44455667777764
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0081 Score=47.58 Aligned_cols=82 Identities=15% Similarity=0.285 Sum_probs=50.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC--CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK--YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|..+++.... .+++.|+|..+... ..-.|+|............ . .. ...++|++|+|+|.|.+
T Consensus 20 ~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~-----~-----~~--~~~~~i~~L~p~t~Y~~ 85 (115)
T 1x5z_A 20 QPLNFKAEPES--ETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT-----I-----EP--GTSYRLQGLKPNSLYYF 85 (115)
T ss_dssp CCEEEEEECSS--SSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE-----E-----CS--SSEEEEECCCTTCEEEE
T ss_pred CCccCEeeeCC--CCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe-----c-----CC--CcEEEECCCCCCCeEEE
Confidence 67777765443 37999999877432 2235566554432221100 0 01 13468899999999999
Q ss_pred EeCC----C--CccceEEEECCCC
Q 046207 131 QLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 131 ~v~~----g--~~~~~~~f~T~p~ 148 (458)
||.. | ..+....|+|.+.
T Consensus 86 ~V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 86 RLAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp CEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEECCCcccCCCcCEEEecCCC
Confidence 9875 3 3345678898765
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.015 Score=44.29 Aligned_cols=82 Identities=16% Similarity=0.177 Sum_probs=48.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+++..-.+ +++.|+|.-+... ..-.|+|....+.. ..... ...+-...++|+||+|+|.|.++
T Consensus 4 ~P~~l~~~~~~~--~si~lsW~~p~~~i~~Y~v~y~~~~~~~-------~~~~~---~~~~~~~~~~l~~L~p~t~Y~~~ 71 (94)
T 1j8k_A 4 RPKGLAFTDVDV--DSIKIAWESPQGQVSRYRVTYSSPEDGI-------HELFP---APDGEEDTAELQGLRPGSEYTVS 71 (94)
T ss_dssp CCCCCEEEEEET--TEEEEECCCCSSCCSCEEEEEEETTTEE-------EEECC---CCCSSCCEEEECSCCCCSEEEEE
T ss_pred CCCccEEEeecC--CEEEEEEcCCCCCcceEEEEEEeCCCCC-------ceEEe---cCCCCccEEEeCCCCCCCEEEEE
Confidence 577777776544 6999999665422 23467787654310 00000 00112346789999999999999
Q ss_pred eCC----CCcc-ceEEEECC
Q 046207 132 LGS----GNAT-RRFHFTTP 146 (458)
Q Consensus 132 v~~----g~~~-~~~~f~T~ 146 (458)
|.. |.+. ....++|.
T Consensus 72 V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 72 VVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp EEECSSSCCCCCEEEEEECC
T ss_pred EEEEcCCCcCCCEEeEEEec
Confidence 875 3322 24556665
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=96.02 E-value=0.054 Score=47.69 Aligned_cols=87 Identities=18% Similarity=0.224 Sum_probs=52.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC-----CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE-----KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..+.+..... ++.|+|..+.. ...-.|+|.......+.... +. ..........++++|+|+|
T Consensus 10 ~~P~~~~~~~~~~---s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~i~~L~p~t 79 (209)
T 2vkw_A 10 SSPSIDQVEPYSS---TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW-----YD--AKEASMEGIVTIVGLKPET 79 (209)
T ss_dssp CCCEEEEEEECSS---CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEE-----EE--HHHHHHHSEEEECCCCTTC
T ss_pred cCCcccEeeeccC---eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeE-----ee--ccCCCccceEEeCCCCCCC
Confidence 3587777765543 68999998742 12235777765543332211 10 0001112356789999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.|.|||.. |..+....++|.+.
T Consensus 80 ~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 80 TYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEEEEEEEcCCcccCCcccccccccCC
Confidence 99999875 33344567888764
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.035 Score=44.44 Aligned_cols=81 Identities=20% Similarity=0.368 Sum_probs=51.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC--CC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE--KY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+..... +++.|+|..+.. .. .-.|+|....+...... . ..-...++|++|+|+|
T Consensus 31 ~P~~l~~~~~~~--~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------~------~~~~~~~~i~~L~p~t 96 (124)
T 2ed9_A 31 PPQNVSLEVVNS--RSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------L------EPNNLWYLFTGLEKGS 96 (124)
T ss_dssp CCBSCCEEEEET--TEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------E------CSSCSEEEEECCCSSC
T ss_pred CCeeeEEEEcCC--CEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------e------cCCcCEEEEcCCCCCC
Confidence 677777665443 699999987753 11 23667776554322211 1 1122346899999999
Q ss_pred EEEEEeCC------CCccceEEEECCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPP 147 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p 147 (458)
.|.+||.. |..+....|+|+.
T Consensus 97 ~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 97 QYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999874 3445577788864
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.96 E-value=0.052 Score=50.50 Aligned_cols=100 Identities=17% Similarity=0.103 Sum_probs=59.1
Q ss_pred CCCCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 50 GFNAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 50 ~~~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
...+|..|.+....+ +++.|+|..+... ..-.|+|............ .. ..-...+.|++|+|+|.|
T Consensus 20 ~p~~P~~l~~~~~~~--~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y 87 (290)
T 3r8q_A 20 AIPAPTDLKFTQVTP--TSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NL------APDSSSVVVSGLMVATKY 87 (290)
T ss_dssp CCCCCEEEEEEEECS--SCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----EE------CTTCCEEEECSCCSSCEE
T ss_pred CCCCCCceEEEECCC--CEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----Ec------CCCccEEEeCCCCCCCEE
Confidence 345788888766554 6999999987532 2346777765432211110 11 111335789999999999
Q ss_pred EEEeCC----C--CccceEEEECCCCCCCCCCeEEEEEec
Q 046207 129 FYQLGS----G--NATRRFHFTTPPKVGPDVPYIFGIIGD 162 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~p~~~~~~~~~f~~~gD 162 (458)
.++|.. | ..+ ...++|.+.+.....+++..+++
T Consensus 88 ~~~V~a~~~~g~s~~s-~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 88 EVSVYALKDTLTSRPA-QGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp EEEEEEEETTEECCCE-EEEEECCCCCCCCEEEEEEEECS
T ss_pred EEEEEEEeCCCCCCCc-ceeEecCCCCCCCceeEEEEcCC
Confidence 999875 2 223 45678866543333344443333
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.96 E-value=0.062 Score=47.34 Aligned_cols=84 Identities=14% Similarity=0.061 Sum_probs=50.7
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC--------CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK--------YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLK 123 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 123 (458)
.+|..+.+..... ++++|+|..+..+ ..-.|+|............ .. .-...++|++|+
T Consensus 6 ~~P~~l~~~~~~~--~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~ 72 (211)
T 3p4l_A 6 MPPVGVQASILSH--DTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----AN------ATTLSYLVTGLK 72 (211)
T ss_dssp CCCEEEEEEECSS--SCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEE-----EE------ESSSEEEECSCC
T ss_pred CCCCCEEEEecCC--CeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEE-----eC------CCceEEEecCcC
Confidence 3788887765544 6999999975311 1246777665432111110 00 112346799999
Q ss_pred CCCEEEEEeCC------CCccceEEEECCCC
Q 046207 124 YDTKYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 124 p~t~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
|+|.|.++|.. |..+....++|.+.
T Consensus 73 p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 73 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 99999999875 23344678888653
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.061 Score=41.70 Aligned_cols=80 Identities=20% Similarity=0.343 Sum_probs=47.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|. +.+... ..+++.|+|..+.... .-.|+|........... ... .-...++|++|+|+|.|
T Consensus 10 ~p~-~~v~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y 75 (107)
T 2dn7_A 10 RPT-MMISTT--AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----DFG------KDDQHFTVTGLHKGTTY 75 (107)
T ss_dssp CCE-EEEEEC--STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----EEE------TTCCEEEEECCCTTCEE
T ss_pred CCc-EeEEec--CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-----EeC------CCccEEEeCCCCCCCEE
Confidence 344 556554 3479999999874222 23677776554333221 110 11235678999999999
Q ss_pred EEEeCC----C--CccceEEEECCC
Q 046207 129 FYQLGS----G--NATRRFHFTTPP 147 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~p 147 (458)
.+||.. | ..+ .-.|+|.+
T Consensus 76 ~~~V~A~n~~G~g~~s-~~~~~T~~ 99 (107)
T 2dn7_A 76 IFRLAAKNRAGLGEEF-EKEIRTPE 99 (107)
T ss_dssp EEEEEEEETTEEEEEE-EEEEECCC
T ss_pred EEEEEEEcCCcccCCe-eeEEeCCC
Confidence 999875 2 223 24577754
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.016 Score=47.09 Aligned_cols=84 Identities=21% Similarity=0.342 Sum_probs=50.0
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC--CCCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE--KYPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~--~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+.... .+++.|+|..+.. .... .|+|...... ...... ........++|++|+|+|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~~~~~----~~~~~~~~~~i~~L~p~t 88 (132)
T 1x5h_A 21 APQNLSLEVRN--SKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTET----LVSGTQLSQLIEGLDRGT 88 (132)
T ss_dssp CCEEEEEECCS--SSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECC----BCCTTCCEEEEECCCSSC
T ss_pred CCeeeEEEeCC--CCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------CccEEE----EeCCCccEEEeCCCCCCC
Confidence 57777765433 4799999998753 2222 3444443211 000000 011223467889999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.|.+||.. |..+....|+|.+.
T Consensus 89 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 89 EYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 99999875 23455678999763
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.03 Score=43.94 Aligned_cols=71 Identities=17% Similarity=0.184 Sum_probs=43.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC-C----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY-P----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..+.+..... +++.|+|..+...+ . -.|+|.......+..+.. ........++++|+|++
T Consensus 9 ~~P~~l~~~~~~~--~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t 76 (110)
T 2yuw_A 9 SPPTLLTVDSVTD--TTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANK----------DLIDKTKFTITGLPTDA 76 (110)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCS----------SCCCSSEEEECSCCTTC
T ss_pred CCCCccEEEeccC--CeEEEEECCCCCCCCCCccEEEEEEEECCCccceEecc----------ccCccCEEEECCCCCCC
Confidence 3677777764443 69999999765322 2 245666554322222110 01112346789999999
Q ss_pred EEEEEeCC
Q 046207 127 KYFYQLGS 134 (458)
Q Consensus 127 ~Y~Y~v~~ 134 (458)
.|.|||..
T Consensus 77 ~Y~frV~A 84 (110)
T 2yuw_A 77 KIFVRVKA 84 (110)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999875
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.90 E-value=0.025 Score=45.04 Aligned_cols=82 Identities=16% Similarity=0.281 Sum_probs=48.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCCCe----EEEEecCCC-CceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPNV----VTHWEANSK-RKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~----v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+..... +++.|+|..+...+... |+|...... .+... +. ... ..+++++|+|+|.
T Consensus 20 ~P~~~~~~~~~~--~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~------~~----~~~--~~~~v~~L~p~t~ 85 (118)
T 1x3d_A 20 IPNPPRIANRTK--NSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQC------YM----GSQ--KQFKITKLSPAMG 85 (118)
T ss_dssp CCCCCEEEEEET--TEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEE------EE----ESC--SEEEEESCCTTCE
T ss_pred CCCCcEEeccCC--CEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEe------ec----cCC--cEEEeCCCCCCCE
Confidence 566666655443 69999998875333333 444443321 12111 11 011 2457899999999
Q ss_pred EEEEeCC----C--CccceEEEECCCC
Q 046207 128 YFYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
|.|||.. | ..+..-.++|.+.
T Consensus 86 Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 86 CKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp EEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred EEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 9999985 3 3345667888764
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.86 E-value=0.035 Score=44.11 Aligned_cols=83 Identities=14% Similarity=0.199 Sum_probs=49.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+++..-. .+++.|+|.-+... ..-.|+|....+... .. ... .-...++|++|+|+|.|.+
T Consensus 9 ~~P~~l~~~~~t--~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~-~~-----~v~------~~~t~~~l~~L~P~t~Y~~ 74 (115)
T 2cuh_A 9 DGPTQLRALNLT--EGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-QA-----ETP------GSAVDYPLHDLVLHTNYTA 74 (115)
T ss_dssp SSCEEEECCCCS--SSCEEEEEECCSSCCSEEEEEEECSSSCCE-EE-----EEE------TTCSEEEECSCCSSSEEEE
T ss_pred CCCcceEEEecc--CCeEEEEEECCCCCccEEEEEEEcCCCCcE-EE-----EEC------CCccEEEEeCCCCCCEEEE
Confidence 367666655433 47999999866432 224577766432111 10 111 1123578999999999999
Q ss_pred EeCC--CC---ccceEEEECCCC
Q 046207 131 QLGS--GN---ATRRFHFTTPPK 148 (458)
Q Consensus 131 ~v~~--g~---~~~~~~f~T~p~ 148 (458)
+|.. |. ......|+|.+.
T Consensus 75 ~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 75 TVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EEEEEETTEECCCEEEEEESCCC
T ss_pred EEEEEeCCCcCCCEEEEEEeCCC
Confidence 9875 21 122567888764
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.042 Score=42.10 Aligned_cols=71 Identities=23% Similarity=0.273 Sum_probs=44.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+....+ +++.|+|..+... ..-.|+|....+...... .... .-...++|++|+|+|.|.+
T Consensus 3 ~~P~~l~v~~~~~--~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~----~~~~------~~~~~~~i~~L~p~t~Y~~ 70 (98)
T 3teu_A 3 DAPTDLQVTNVTD--TSITVSWTPPSATITGYRITYTPSNGPGEPKE----LTVP------PSSTSVTITGLTPGVEYVV 70 (98)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEETTSCSCCEE----EEEC------TTCSEEEECSCCTTCEEEE
T ss_pred CCCCceEEEEecC--CEEEEEEeCCCCcccEEEEEEEECCCCCceEE----EEcC------CCcCEEEecCCCCCCEEEE
Confidence 3677877765443 6999999987432 234678876543221110 0110 1123478999999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
||..
T Consensus 71 ~V~A 74 (98)
T 3teu_A 71 SVYA 74 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.015 Score=46.25 Aligned_cols=71 Identities=15% Similarity=0.224 Sum_probs=42.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC---CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY---PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
.+|..+.+.... .+++.|+|..+...+ .-.|+|....+..+.... . ...-...++|++|+|+|.|
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~-----~-----~~~~~~~~~i~~L~p~t~Y 86 (118)
T 2yrz_A 19 DTPTRLVFSALG--PTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLN-----I-----PNPAQTSVVVEDLLPNHSY 86 (118)
T ss_dssp CCCCCCEECCCB--TTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEE-----E-----SCTTCCEEEEESCCTTCEE
T ss_pred CCCCceEEEeCC--CCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEE-----c-----CCCCcCEEEeCCCCCCCEE
Confidence 367777665443 369999998775432 124566554432221110 0 0111235678999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.+||..
T Consensus 87 ~~~V~A 92 (118)
T 2yrz_A 87 VFRVRA 92 (118)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.80 E-value=0.013 Score=46.84 Aligned_cols=83 Identities=17% Similarity=0.221 Sum_probs=47.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-----CCCeEEEEecCCC-CceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-----YPNVVTHWEANSK-RKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+...-. .+++.|+|..+... ..-.|+|...... .+..+. . +-....++++|+|+|
T Consensus 20 ~P~~~~~~~~~~-~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~------~------~~~~~~~v~~L~p~t 86 (120)
T 2crm_A 20 IPVKPSVKGKIH-SHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY------S------GATREHLCDRLNPGC 86 (120)
T ss_dssp CCCCCEEEEEEE-TTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE------C------SSCSEEEECSCCTTS
T ss_pred CCCCCEEeeccC-CCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE------e------ccccEEEECCCCCCC
Confidence 455544541111 36999999876432 2235666655431 222211 0 112246789999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.|.|||.. |..+....++|.+.
T Consensus 87 ~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 87 FYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp CEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred EEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 99999975 23344556677543
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.042 Score=42.41 Aligned_cols=70 Identities=20% Similarity=0.288 Sum_probs=43.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.++- -..+++.|+|..+...- .-.|+|....+..... ..... .-.-.++|+||+|+|.|.++
T Consensus 4 ~P~~l~v~~--~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~~~~------~~~t~~~l~gL~P~t~Y~~~ 71 (98)
T 3tes_A 4 APKNLVVSE--VTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAI----NLTVP------GSERSYDLTGLKPGTEYTVS 71 (98)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCE----EEEEE------TTCSEEEECSCCTTCEEEEE
T ss_pred CCCceEEEe--cCCCeEEEEecCCcCccceEEEEEEECCCCCceE----EEEcC------CCcCEEEECCCCCCCEEEEE
Confidence 576766653 34479999998775322 3467787764211110 01111 11234789999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 72 V~A 74 (98)
T 3tes_A 72 IYG 74 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.036 Score=43.45 Aligned_cols=70 Identities=13% Similarity=0.194 Sum_probs=40.7
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecC-CCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEAN-SKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.++.... .+++.|+|..... ......|.... +.....+ ++. . . .. ..+.++|++|++|+|
T Consensus 6 ~aP~~l~a~~~~~-~~~v~LsW~~~~~-~~~Y~VyR~~~~~~~~~~i-~~~--~---~-~t----sy~d~~l~~g~~Y~Y 72 (103)
T 3mpc_A 6 AFPTGLSAVLDSS-GNTANLTWNAAPG-ANSYNVKRSTKSGGPYTTI-ATN--I---T-ST----NYTDTGVATGTKYYY 72 (103)
T ss_dssp CCCEEEEEEECTT-SCCEEEEEECCTT-CSEEEEEEESSTTCCCEEE-EEE--E---C-SS----EEEETTCCTTCCCEE
T ss_pred CCCceeEEEEeCC-CCEEEEEEECCCC-CCEEEEEEecCCCCCcEEE-eec--C---C-CC----EEEECCCCCCCEEEE
Confidence 4788877766432 2699999998643 34444455433 2211111 110 0 0 01 124579999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 73 ~V~A 76 (103)
T 3mpc_A 73 VVSA 76 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.69 E-value=0.041 Score=47.43 Aligned_cols=84 Identities=15% Similarity=0.166 Sum_probs=49.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+.... .+++.|+|..+... ..-.|+|....+...... ... .-...++|++|+|+|.|.+
T Consensus 96 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~~ 162 (186)
T 1qr4_A 96 GSPKGISFSDIT--ENSATVSWTPPRSRVDSYRVSYVPITGGTPNVV-----TVD------GSKTRTKLVKLVPGVDYNV 162 (186)
T ss_dssp CCCSCEEEESCC--SSCEEEEECCCSSCCSEEEEEEEETTCCCCEEE-----EEE------TTCCEEEECSCCSSCEEEE
T ss_pred CCCCccEEEEeC--CCEEEEEEECCCCcccEEEEEEEeCCCCCceEE-----EcC------CCcCEEEEcCCCCCCEEEE
Confidence 467777766433 37999999866432 234667776543222111 111 1124567999999999999
Q ss_pred EeCC----CCc-cceEEEECCCC
Q 046207 131 QLGS----GNA-TRRFHFTTPPK 148 (458)
Q Consensus 131 ~v~~----g~~-~~~~~f~T~p~ 148 (458)
+|.. |.+ .....|+|.|.
T Consensus 163 ~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 163 NIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EEEEEETTEECCCEEEEEEC---
T ss_pred EEEEEcCCCcCcCEEEEEEecCC
Confidence 9875 222 23567888774
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.68 E-value=0.044 Score=43.81 Aligned_cols=72 Identities=17% Similarity=0.181 Sum_probs=43.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC----CCCeEEEEecC-CCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK----YPNVVTHWEAN-SKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..+.+..-. .+++.|+|.-.... ..-.|+|.... +..+..+... . ..-...++|++|+|+|
T Consensus 19 ~~P~~~~~~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---~------~~~~~~~~v~~L~p~t 87 (121)
T 1x4z_A 19 EAPDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA---I------PPSRLSVEITGLEKGI 87 (121)
T ss_dssp CCCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE---E------CTTCCEEEEESCCTTC
T ss_pred ccCCCCEEEEcc--CCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc---c------CCCcCEEEECCCCCCC
Confidence 356667666544 36999999843322 22367777654 2233322111 0 1122456789999999
Q ss_pred EEEEEeCC
Q 046207 127 KYFYQLGS 134 (458)
Q Consensus 127 ~Y~Y~v~~ 134 (458)
.|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1x4z_A 88 SYKFRVRA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.076 Score=46.68 Aligned_cols=70 Identities=11% Similarity=0.069 Sum_probs=43.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC--CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK--YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|..+.+.... .+++.|+|..+... ..-.|+|....+....... ... .-...++|++|+|+|.|.+
T Consensus 25 ~P~~l~~~~~~--~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~~~------~~~~~~~i~~L~p~t~Y~~ 92 (203)
T 2gee_A 25 QPTDLSFVDIT--DSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED----FVD------SSVGYYTVTGLEPGIDYDI 92 (203)
T ss_dssp CCEEEEEECCT--TTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE----EEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCccEEEecC--CCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE----EcC------CCccEEEeCCCCCCCEEEE
Confidence 57676665544 36999999977521 1346777765543221110 110 1123467899999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 93 ~V~a 96 (203)
T 2gee_A 93 SVYT 96 (203)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.065 Score=48.21 Aligned_cols=97 Identities=13% Similarity=0.234 Sum_probs=57.6
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+..... +++.|+|..+... ..-.|+|....+...... ... .....++|++|+|+|.|.+
T Consensus 7 ~~P~~l~~~~~~~--~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~~ 73 (234)
T 3f7q_A 7 GAPQNPNAKAAGS--RKIHFNWLPPSGKPMGYRVKYWIQGDSESEAH-----LLD------SKVPSVELTNLYPYCDYEM 73 (234)
T ss_dssp CCCEEEEEEECSS--SCEEEEEECCSSCCCEEEEEEEETTSCGGGCE-----EEE------ESSSEEEECSCCTTCEEEE
T ss_pred CCCcceEEEEcCC--CEEEEEEECCCCccceEEEEEEECCCCccceE-----EEc------CCccEEEECCCCCCCEEEE
Confidence 4788887775543 6999999876422 234677876544322110 000 1122467899999999999
Q ss_pred EeCC------CCccceEEEECCCC-CCCCCCeEEEEEe
Q 046207 131 QLGS------GNATRRFHFTTPPK-VGPDVPYIFGIIG 161 (458)
Q Consensus 131 ~v~~------g~~~~~~~f~T~p~-~~~~~~~~f~~~g 161 (458)
+|.. |..+....++|.+. |.....+++..++
T Consensus 74 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~ 111 (234)
T 3f7q_A 74 KVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVS 111 (234)
T ss_dssp EEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECS
T ss_pred EEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEec
Confidence 9874 33344667888643 2223345554433
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.05 Score=43.79 Aligned_cols=86 Identities=13% Similarity=0.200 Sum_probs=49.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcC--CCCCCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTP--DEKYPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+..... .+++.|+|.-+ ...... .|+|........... ..... .-...++|++|+|+|
T Consensus 21 ~P~~~~~~~~~s-~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~---~~~~~------~~~~~~~l~~L~p~t 90 (124)
T 2dbj_A 21 APLNVTVFLNES-SDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKEL---LEEVG------QNGSRARISVQVHNA 90 (124)
T ss_dssp CCEEEEEEECSS-SSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEE---EEEEE------STTSCEEEECCCSSS
T ss_pred CCcceEEEecCC-CCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccce---EEEeC------CCcceEEecCCCCCC
Confidence 677777763222 37999999887 322222 444432211110000 00011 111356789999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.|.+||.. |..+....++|++.
T Consensus 91 ~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 91 TCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp EEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999875 44566788999874
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.61 E-value=0.049 Score=43.88 Aligned_cols=87 Identities=14% Similarity=0.133 Sum_probs=50.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEec---CCCCceEEEEEEEEEEecccccceEEEEEecCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEA---NSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 124 (458)
.+|..+.+..-. .+++.|+|.-....+ .-.|+|... ....+..+... . .......++|++|+|
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~----~----~~~~~~~~~v~~L~p 88 (124)
T 1wis_A 19 GPPTNLGISNIG--PRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL----S----NEPDARSMEVPDLNP 88 (124)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE----E----SCTTCSEEEECSCCT
T ss_pred ccCCCCEEEEec--CCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE----c----cCCCceEEEeCCCCC
Confidence 478777765433 479999996553222 236677662 22223221110 0 011223578899999
Q ss_pred CCEEEEEeCC----CC--ccc-eEEEECCCC
Q 046207 125 DTKYFYQLGS----GN--ATR-RFHFTTPPK 148 (458)
Q Consensus 125 ~t~Y~Y~v~~----g~--~~~-~~~f~T~p~ 148 (458)
+|.|.+||.. |. .+. ...++|.+.
T Consensus 89 ~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~ 119 (124)
T 1wis_A 89 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQS 119 (124)
T ss_dssp TSEECCCCEEECSSCBCCCCCCCCCEECCCS
T ss_pred CCEEEEEEEEEECCccCCCcCCccceEcCCC
Confidence 9999999875 32 222 346788764
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.60 E-value=0.065 Score=42.11 Aligned_cols=71 Identities=18% Similarity=0.191 Sum_probs=46.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC---C----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE---K----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 124 (458)
.+|..+++..-....+++.|+|..+.. + ..-.|+|....+.....+... . ...+.|.+|+|
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~-------~-----~~~~~l~~L~p 76 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS-------N-----GTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEES-------S-----CSEEEETTCCS
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecc-------c-----CCEEEEeCCCC
Confidence 478888887644333799999998752 1 234778887654332211100 0 12467899999
Q ss_pred CCEEEEEeCC
Q 046207 125 DTKYFYQLGS 134 (458)
Q Consensus 125 ~t~Y~Y~v~~ 134 (458)
+|.|..||..
T Consensus 77 ~t~Y~~~VRa 86 (109)
T 1uc6_A 77 GKEYIIQVAA 86 (109)
T ss_dssp SSCEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 9999999875
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.036 Score=44.28 Aligned_cols=71 Identities=21% Similarity=0.268 Sum_probs=45.2
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+.-..+ +++.|+|..+... ..-.|+|....+..... . .... .-.-.++|+||+|+|.|..
T Consensus 5 ~~P~~L~v~~~t~--~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~-~~v~------~~~ts~~l~gL~P~T~Y~v 72 (114)
T 3qwq_B 5 DVPRDLEVVAATP--TSLLISWDSGRGSYQYYRITYGETGGNSPVQ---E-FTVP------GPVHTATISGLKPGVDYTI 72 (114)
T ss_dssp CCCEEEEEEEEET--TEEEEEEECCSCCCSEEEEEEEESSCSSCCE---E-EEEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecCC--CEEEEEEcCCcCcccEEEEEEEECCCCCccE---E-EEeC------CCcCEEEeCCCCCCCEEEE
Confidence 3687887776443 6999999876432 23467888765431110 0 0111 1123478999999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 73 ~V~A 76 (114)
T 3qwq_B 73 TVYA 76 (114)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.53 E-value=0.089 Score=41.92 Aligned_cols=68 Identities=21% Similarity=0.248 Sum_probs=36.1
Q ss_pred CCceEEEEEcCCCCCCC----eEEEEec-CCCCceEEEEEEEEEEec--ccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 66 GRSVIVSWVTPDEKYPN----VVTHWEA-NSKRKHKTHSIIKTYRYF--NYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 66 ~~~~~i~W~t~~~~~~~----~v~y~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
.++++|+|..+...+.. .|+|... ....+..+... ..+... ....+-...+++++|+|+|.|.+||..
T Consensus 16 ~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~-~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 16 DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDN-IPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp ---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEE-EECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred CCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECccc-ccccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence 37999999987544443 4566655 22233332211 111000 001123346789999999999999875
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.48 E-value=0.041 Score=44.45 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=26.0
Q ss_pred EEEecCCCCCCEEEEEeCC----CC--ccceEEEECCCC
Q 046207 116 HATIKRLKYDTKYFYQLGS----GN--ATRRFHFTTPPK 148 (458)
Q Consensus 116 ~~~l~gL~p~t~Y~Y~v~~----g~--~~~~~~f~T~p~ 148 (458)
.+++++|+|+|+|.+||.. |. .++...++|.+.
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 3689999999999999886 42 345678888775
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.48 E-value=0.052 Score=43.78 Aligned_cols=73 Identities=14% Similarity=0.116 Sum_probs=45.9
Q ss_pred CCceEEEEEcCCCCC---CCeEEEEecCC----CCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC----
Q 046207 66 GRSVIVSWVTPDEKY---PNVVTHWEANS----KRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS---- 134 (458)
Q Consensus 66 ~~~~~i~W~t~~~~~---~~~v~y~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 134 (458)
++++.|+|......+ .-.|.|+.... ...... .. ...-...++|+||+|+|.|.++|..
T Consensus 29 stsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~-----~v-----~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~ 98 (120)
T 1ujt_A 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL-----DA-----KVPTERSAVLVNLKKGVTYEIKVRPYFNE 98 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE-----EC-----CCTTCCEEEEESCCSSEEEEEEEEEESSS
T ss_pred CceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEE-----Ee-----cCCCcCEEEECCCCCCCEEEEEEEEECCC
Confidence 479999999642111 23788887654 111111 00 0112346789999999999999864
Q ss_pred --CCccceEEEECCCC
Q 046207 135 --GNATRRFHFTTPPK 148 (458)
Q Consensus 135 --g~~~~~~~f~T~p~ 148 (458)
|..|..-.|+|+..
T Consensus 99 G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 99 FQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCCCCCCCEEEEECSS
T ss_pred ccCCCCCCEEEECCCC
Confidence 45566778888764
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.026 Score=44.03 Aligned_cols=71 Identities=21% Similarity=0.228 Sum_probs=44.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+++.--.+ +++.|+|..+... ..-.|+|.......... . .... .-...++|++|+|+|.
T Consensus 9 ~~P~~l~v~~~t~--~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~---~-~~v~------~~~ts~~l~~L~p~t~ 76 (103)
T 3t04_D 9 SVPTKLEVVDATP--TSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ---E-FTVP------GYYSTATISGLKPGVD 76 (103)
T ss_dssp CCCCSCEEEEEET--TEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE---E-EEEE------TTCCEEEECSCCTTCC
T ss_pred CCCceeEEEecCC--CEEEEEccCCCCCCCccceEEEEEEECCCCCccE---E-EEcC------CCcCEEEeCCCCCCCE
Confidence 3677888765443 6999999876521 22367887764321111 0 0111 1124578999999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.++|..
T Consensus 77 Y~~~V~A 83 (103)
T 3t04_D 77 YTITVYA 83 (103)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999764
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.39 E-value=0.029 Score=44.18 Aligned_cols=71 Identities=14% Similarity=0.196 Sum_probs=43.6
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..+.+..... +++.|+|..+...+ .-.|+|.......+..... ...-...+++++|+|++
T Consensus 10 ~~P~~l~~~~~~~--~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t 77 (111)
T 1x5y_A 10 SAPQHLTVEDVTD--TTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGA 77 (111)
T ss_dssp CCCEEEEEEEECS--SEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTC
T ss_pred cCCCCCEEEeccC--CEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc----------cCCcccEEEECCCCCCC
Confidence 3677777765443 69999999764322 2356666554332221110 00112346789999999
Q ss_pred EEEEEeCC
Q 046207 127 KYFYQLGS 134 (458)
Q Consensus 127 ~Y~Y~v~~ 134 (458)
.|.|||..
T Consensus 78 ~Y~frV~A 85 (111)
T 1x5y_A 78 RILFRVVG 85 (111)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999985
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.34 E-value=0.076 Score=39.98 Aligned_cols=84 Identities=31% Similarity=0.372 Sum_probs=52.1
Q ss_pred CCCCccEEEEecCCCCCceEEEEEcCCCC--CCCeEEEEecCCC-CceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 51 FNAPEQVHITQGDHDGRSVIVSWVTPDEK--YPNVVTHWEANSK-RKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 51 ~~~p~~v~~~~~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
...|.|+.++....-.++-.|.|..+... ..-.+.|...... .+..+. ..+....-+|+||+||..
T Consensus 5 ~~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~-----------Ip~h~nSYtI~GL~P~~~ 73 (98)
T 1oww_A 5 SSGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVV 73 (98)
T ss_dssp -CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----------ECSSCCEEEECSCCSSEE
T ss_pred CCcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEE-----------ecCccceEEEecCCCCcE
Confidence 34677777766543348999999887532 2345666665543 222211 122344558999999999
Q ss_pred EEEEeCC----CCcc-ceEEEEC
Q 046207 128 YFYQLGS----GNAT-RRFHFTT 145 (458)
Q Consensus 128 Y~Y~v~~----g~~~-~~~~f~T 145 (458)
|.=++-+ |++. ..+.|.|
T Consensus 74 YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 74 YEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEEEeeccCcccceEEEEEe
Confidence 9999876 6542 2677776
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.098 Score=42.11 Aligned_cols=71 Identities=21% Similarity=0.254 Sum_probs=45.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+..... +++.|+|.-+... ..-.|+|....+..... ..... .-.-.++|+||+|+|.|.+
T Consensus 30 ~~P~~l~v~~~t~--~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~----~~~v~------~~~t~~~l~gL~P~t~Y~~ 97 (121)
T 2ocf_D 30 DVPTKLEVVAATP--TSLLISWDAPAVTVRYYRITYGETGGNSPVQ----EFTVP------GSKSTATISGLKPGVDYTI 97 (121)
T ss_dssp CSCEEEEEEEECS--SCEEEEEECCSSCCCEEEEEEEETTTCSCBE----EEEEE------TTCCEEEECCCCTTCEEEE
T ss_pred CCCCccEEEecCC--CEEEEEEcCCCCCCcEEEEEEEECCCCCccE----EEEeC------CCcCEEEeCCCCCCCEEEE
Confidence 4788888876443 6999999876422 23467787655422110 00111 1123578999999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 98 ~V~A 101 (121)
T 2ocf_D 98 TVYA 101 (121)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.057 Score=43.16 Aligned_cols=70 Identities=19% Similarity=0.257 Sum_probs=45.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..+.+..... +++.|+|..+... ..-.|+|.......+..+... .-...+++++|+|++
T Consensus 19 ~~P~~l~~~~~~~--~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~-----------~~~~~~~v~~L~p~t 85 (120)
T 2yux_A 19 GPPQIVKIEDVWG--ENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEH-----------YHRTSATITELVIGN 85 (120)
T ss_dssp CCCSCEEEEEEET--TEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESS-----------CCSSCCEECCCCSSE
T ss_pred CcCCCCEEEEecC--CEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeec-----------CCcCEEEECCCCCCC
Confidence 4677777765443 6999999876422 235678877654433332110 112235789999999
Q ss_pred EEEEEeCC
Q 046207 127 KYFYQLGS 134 (458)
Q Consensus 127 ~Y~Y~v~~ 134 (458)
.|.|||..
T Consensus 86 ~Y~frV~A 93 (120)
T 2yux_A 86 EYYFRVFS 93 (120)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEE
Confidence 99999986
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.30 E-value=0.15 Score=39.63 Aligned_cols=83 Identities=17% Similarity=0.240 Sum_probs=50.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+..-. .+++.|+|.-+... ..-.|+|....+. ...+ .. ..-...++|++|+|+|.|.+
T Consensus 9 ~~P~~l~v~~~~--~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~~~~-----~~------~~~~ts~~l~~L~p~t~Y~~ 74 (105)
T 2cum_A 9 EAPRDLEAKEVT--PRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQEI-----LL------PGGITSHQLLGLFPSTSYNA 74 (105)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEECTTSC-EEEE-----EE------CSSCSEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecc--CCEEEEEEcCCCCccceEEEEEEeCCCc-eEEE-----EE------CCCccEEEECCCCCCCEEEE
Confidence 367777666443 47999999876432 2236777764431 1111 11 11123578999999999999
Q ss_pred EeCC----CCc-cceEEEECCCC
Q 046207 131 QLGS----GNA-TRRFHFTTPPK 148 (458)
Q Consensus 131 ~v~~----g~~-~~~~~f~T~p~ 148 (458)
+|.. |.+ .....|+|...
T Consensus 75 ~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 75 RLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp EEEEEBTTBCCCCEEEEEECCCS
T ss_pred EEEEEeCCcccCCEEEEEEeCCc
Confidence 9875 222 23567888653
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.25 E-value=0.039 Score=44.77 Aligned_cols=86 Identities=19% Similarity=0.180 Sum_probs=50.6
Q ss_pred CCccEEEEecCCCCCceEEEEEcC--CCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTP--DEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~--~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+.... .+++.|+|..+ ..... -.|+|.......... .... ........++|++|+|+|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~-----~~~~---~~~~~~~~~~i~~L~p~t 90 (134)
T 2edx_A 21 PPQKVMCVSMG--STTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGR-----HVVD---GISREHSSWDLVGLEKWT 90 (134)
T ss_dssp CSEEEEEECSS--SSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCC-----EEEC---CCBTTCSEEEEESCCTTC
T ss_pred CCcccEEEeCC--CCEEEEEecCCCccCCCCceeEEEEEEEECCCCCccc-----EEEE---eeCCCccEEEeCCCCCCC
Confidence 67777766443 36999999987 32222 245555543321110 0000 001223457899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.|.+||.. |..+....++|.+.
T Consensus 91 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 91 EYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp EEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 99999875 34455667888754
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.20 E-value=0.019 Score=46.10 Aligned_cols=88 Identities=22% Similarity=0.288 Sum_probs=51.3
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC------CCCCeEEEEecCCCCc---eEEEEEEEEEEecccccceEEEEEecCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE------KYPNVVTHWEANSKRK---HKTHSIIKTYRYFNYSSGYIHHATIKRLK 123 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 123 (458)
+|..+.+..... +++.|+|..+.. ...-.|+|....+... .........+. .-...++|++|+
T Consensus 17 ~P~~l~~~~~~~--~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~L~ 88 (125)
T 1uen_A 17 APGNVRVNVVNS--TLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ------GSKTHGMLPGLE 88 (125)
T ss_dssp CCSSCEEEEEET--TEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE------SSCSEEEEESCC
T ss_pred CCceeEEEecCC--cEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEec------CCccEEEeCCCC
Confidence 677777765443 699999987531 1123566665543221 00001111111 112357899999
Q ss_pred CCCEEEEEeCC----C--CccceEEEECCCC
Q 046207 124 YDTKYFYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 124 p~t~Y~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
|+|.|.+||.. | ..+....|+|.+.
T Consensus 89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 99999999875 3 3345678888753
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.2 Score=43.06 Aligned_cols=70 Identities=14% Similarity=0.268 Sum_probs=44.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..+.+..... +++.|+|..+... ..-.|+|.............. .-.....+++|+|+|
T Consensus 7 ~~P~~l~~~~~~~--~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t 73 (197)
T 3lpw_A 7 GPPQDLKVKEVTK--TSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGC 73 (197)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTC
T ss_pred CCCCCcEEEEecC--CEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCC
Confidence 3677777765443 6999999987422 223677776654333322111 011346789999999
Q ss_pred EEEEEeCC
Q 046207 127 KYFYQLGS 134 (458)
Q Consensus 127 ~Y~Y~v~~ 134 (458)
.|.|||..
T Consensus 74 ~Y~~~V~a 81 (197)
T 3lpw_A 74 SYYFRVLA 81 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999875
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=95.18 E-value=0.036 Score=49.03 Aligned_cols=88 Identities=14% Similarity=0.175 Sum_probs=51.8
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+...+...+++.|+|..+.... .-.|+|....+..+..+... ....-...++|++|+|+|.
T Consensus 105 ~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~ 176 (215)
T 1bqu_A 105 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 176 (215)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSEE
T ss_pred CCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCCCE
Confidence 47777777654333479999998764322 23667766543322221100 0011223568999999999
Q ss_pred EEEEeCC------CC---ccceEEEECCC
Q 046207 128 YFYQLGS------GN---ATRRFHFTTPP 147 (458)
Q Consensus 128 Y~Y~v~~------g~---~~~~~~f~T~p 147 (458)
|.+||.. |. .+....++|.+
T Consensus 177 Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 177 YVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEccCCCCCccCCCCCcccccccc
Confidence 9999875 22 23466777765
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.17 E-value=0.065 Score=43.17 Aligned_cols=84 Identities=17% Similarity=0.230 Sum_probs=47.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCCC----eEEEEecCC--CCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYPN----VVTHWEANS--KRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..+.+..-. .+++.|+|.-+...+.. .|+|..... ..+.... ... . .. .. .+.+|+|+
T Consensus 18 ~~P~~~~~~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~----~~~--~--~~-~~--~i~~L~p~ 84 (127)
T 1uey_A 18 NPPFDLELTDQL--DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT----EVS--G--TQ-TT--AQLNLSPY 84 (127)
T ss_dssp CCCEEEEEECCS--SSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE----EEE--S--SC-CE--EEECCCTT
T ss_pred cCCCCcEEEEcc--CCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEe----eeC--C--Cc-eE--EEecCCCC
Confidence 378887776543 36999999965423332 455655432 1122111 111 0 11 12 36699999
Q ss_pred CEEEEEeCC----C--Cccce-EEEECCCC
Q 046207 126 TKYFYQLGS----G--NATRR-FHFTTPPK 148 (458)
Q Consensus 126 t~Y~Y~v~~----g--~~~~~-~~f~T~p~ 148 (458)
|.|.|||.. | ..+.. ..++|.+.
T Consensus 85 t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 85 VNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred CEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 999999875 3 22333 46888654
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.015 Score=46.36 Aligned_cols=85 Identities=15% Similarity=0.192 Sum_probs=49.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCCCeEEE----EecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTH----WEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.... .+++.|+|..+.........| ....+..... .... ...-...++|++|+|+|.|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~~-----~~~~~~~~~i~~L~p~t~Y 89 (121)
T 2dlh_A 21 APRDVQARMLS--STTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNN----WMKH-----NVADSQITTIGNLVPQKTY 89 (121)
T ss_dssp CCEEEEECCCS--SSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTT----SCCC-----CCSSCSEECCBSCCSSCEE
T ss_pred CCcccEEEecC--CCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccc----cEEE-----ecCCceEEEecCCCCCCEE
Confidence 67776665433 479999999875333333344 3332211000 0000 0011235689999999999
Q ss_pred EEEeCC------CCccceEEEECCCC
Q 046207 129 FYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 129 ~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.+||.. |..+....|+|.+.
T Consensus 90 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 90 SVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEeCCccCCCCCCEEEECCCC
Confidence 999875 34455778888754
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.067 Score=47.16 Aligned_cols=83 Identities=17% Similarity=0.162 Sum_probs=48.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC-----CCCCeEEEEecCC-CCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE-----KYPNVVTHWEANS-KRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~-----~~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+.. ...+++.|+|..+.. ...-.|+|..... ....... .. ..-....+|++|+|+|
T Consensus 118 ~P~~~~~~~--~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~-----~~~~~~~~i~~L~p~t 185 (214)
T 2ibg_A 118 VPELLEIEE--YSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT-----IE-----GAHARSFKIAPLETAT 185 (214)
T ss_dssp CCEECCCBC--CSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE-----EE-----CTTCCEEEECSCCTTC
T ss_pred CCcccEEEE--ccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEee-----cc-----CCcceEEEeCCCCCCC
Confidence 565544443 334699999998731 1223677776554 2222111 10 0111245789999999
Q ss_pred EEEEEeCC------CCccceEEEECCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPP 147 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p 147 (458)
.|.|||.. |..+....++|..
T Consensus 186 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 186 MYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcceEeeEecC
Confidence 99999875 3345577888864
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.95 E-value=0.076 Score=42.21 Aligned_cols=73 Identities=19% Similarity=0.237 Sum_probs=40.7
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+......-..+++.|+|..+...+.. .|+|.... ..+...... ...-...++|++|+|++.
T Consensus 19 ~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~---------~~~~~~~~~v~~L~p~t~ 88 (121)
T 1wf5_A 19 HAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLAS---------VDPKATSVTVKGLVPARS 88 (121)
T ss_dssp CCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEESS---------CCTTCCEEEEESCCTTCE
T ss_pred ccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEcc---------cCCCccEEEECCcCCCCE
Confidence 3566662222233347999999866433332 44555443 222211000 111233578899999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.|||..
T Consensus 89 Y~frV~A 95 (121)
T 1wf5_A 89 YQFRLCA 95 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=94.95 E-value=0.056 Score=41.45 Aligned_cols=70 Identities=19% Similarity=0.244 Sum_probs=44.6
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCC-ceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKR-KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
.+|..+++..-.+ +++.|+|..+... ..-.|+|....+.. .... ... +-...++|+||+|+|.|.
T Consensus 6 ~~P~~l~v~~~t~--~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~v~------~~~t~~~l~~L~p~t~Y~ 72 (97)
T 3qht_C 6 SVPTKLEVVAATP--TSLLISWDASSSSVSYYRITYGETGGNSPVQEF-----TVP------GSSSTATISGLSPGVDYT 72 (97)
T ss_dssp CSSSSCEEEEEET--TEEEEECCCCCSSCCEEEEEEEESSSCSCCEEE-----EEE------TTCCEEEECSCCTTCEEE
T ss_pred CCCCceEEEecCC--CEEEEEEeCCCCCCCEEEEEEEECCCCCccEEE-----EeC------CCcCEEEeCCCCCCCEEE
Confidence 4677787776543 6999999876422 22467787765431 1111 111 112357899999999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
++|..
T Consensus 73 v~V~A 77 (97)
T 3qht_C 73 ITVYA 77 (97)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=94.91 E-value=0.11 Score=45.82 Aligned_cols=86 Identities=9% Similarity=0.064 Sum_probs=51.5
Q ss_pred CCCccEEEEecCC----CCCceEEEEEcCCCCC----CCeEEEE-ecCCCCceEEEEEEEEEEecccccceEEEEEecCC
Q 046207 52 NAPEQVHITQGDH----DGRSVIVSWVTPDEKY----PNVVTHW-EANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRL 122 (458)
Q Consensus 52 ~~p~~v~~~~~~~----~~~~~~i~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL 122 (458)
.+|..+.+....+ ..+++.|+|..+...+ .-.|+|. ...+..+..+. .. ......+.|.+|
T Consensus 110 ~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~----~~------~~~~~~~~l~~L 179 (215)
T 1cd9_B 110 EPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVF----HL------PSSKDQFELCGL 179 (215)
T ss_dssp CCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEE----EE------ESCEEEEEECCC
T ss_pred CCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEe----cc------cCcceEEEEcCC
Confidence 4677776655321 2478999998774322 2367777 44433333221 11 112345789999
Q ss_pred CCCCEEEEEeCC------C---CccceEEEECCC
Q 046207 123 KYDTKYFYQLGS------G---NATRRFHFTTPP 147 (458)
Q Consensus 123 ~p~t~Y~Y~v~~------g---~~~~~~~f~T~p 147 (458)
+|+|.|.+||.. | .+|....|+|+.
T Consensus 180 ~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 180 HQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 999999999874 3 235567788865
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=94.90 E-value=0.14 Score=45.13 Aligned_cols=84 Identities=13% Similarity=0.179 Sum_probs=53.7
Q ss_pred CCCccEEEEecC--CCCCceEEEEEcCCCCC--------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecC
Q 046207 52 NAPEQVHITQGD--HDGRSVIVSWVTPDEKY--------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKR 121 (458)
Q Consensus 52 ~~p~~v~~~~~~--~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 121 (458)
.+|..|.+.... ...+++.|+|..+.... .-.|+|....+..+... .. .-.....|.+
T Consensus 104 ~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~------~~------~~~~~~~l~~ 171 (210)
T 3n06_B 104 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH------FA------GQQTEFKILS 171 (210)
T ss_dssp CCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE------EE------ETCSEEEECC
T ss_pred CCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE------ec------cCceEEEEec
Confidence 478888887643 22479999999875322 23566776544333211 00 0112467899
Q ss_pred CCCCCEEEEEeCC----C---CccceEEEECCC
Q 046207 122 LKYDTKYFYQLGS----G---NATRRFHFTTPP 147 (458)
Q Consensus 122 L~p~t~Y~Y~v~~----g---~~~~~~~f~T~p 147 (458)
|+|+|.|..||.. | .+|+...|+|+.
T Consensus 172 L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 172 LHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp CCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred cCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 9999999999874 3 345678899954
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.043 Score=43.59 Aligned_cols=58 Identities=17% Similarity=0.244 Sum_probs=36.7
Q ss_pred CceEEEEEcCCC-----CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 67 RSVIVSWVTPDE-----KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 67 ~~~~i~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
++++|+|..+.. ...-.|+|....+..+..+... ....-.+++++|+|+|.|.|||..
T Consensus 25 ~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~----------~~~~~~~~v~~L~p~t~Y~frV~A 87 (112)
T 1bpv_A 25 HTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS----------NILENEFTVSGLTEDAAYEFRVIA 87 (112)
T ss_dssp TEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS----------CCCSSEEEECSCCSSCCEEEEEEE
T ss_pred CEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc----------cCccCEEEECCCCCCCEEEEEEEE
Confidence 699999985421 2345788887654333322110 011123578999999999999875
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.85 E-value=0.037 Score=43.81 Aligned_cols=69 Identities=14% Similarity=0.266 Sum_probs=41.0
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCC-CceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSK-RKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+..... +++.|+|..+.... .-.|+|....+. .+..+.. . .....+++++|+|++.
T Consensus 18 ~P~~~~~~~~~~--~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----~------~~~~~~~i~~L~p~t~ 84 (117)
T 1uem_A 18 PPSKPQVTDVTK--NSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN-----H------VKTTLYTVRGLRPNTI 84 (117)
T ss_dssp CCCCCEEEEECS--SCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE-----E------ECSSEEEECSCCTTCE
T ss_pred CCCCCEEEEecC--CEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEccc-----c------cCcCEEEECCCCCCCE
Confidence 577777764443 69999998664222 235666654311 1111110 0 0112468899999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.|||..
T Consensus 85 Y~frV~A 91 (117)
T 1uem_A 85 YLFMVRA 91 (117)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=94.75 E-value=0.082 Score=54.25 Aligned_cols=82 Identities=23% Similarity=0.314 Sum_probs=49.0
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.. ...+++.|+|..+.... .-.|+|....+..... ... .-...++|++|+|+|.|
T Consensus 443 ~Ps~~~~~~--~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~------~v~------~~~ts~~l~gL~P~T~Y 508 (536)
T 3fl7_A 443 EPPKVRLEG--RSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYN------VRR------TEGFSVTLDDLAPDTTY 508 (536)
T ss_dssp CCCEEEEEE--CCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCE------EEE------ESSSEEECCSCCSSCEE
T ss_pred CCCCCceee--ccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEE------EEc------CCCCEEEECCCCCCCEE
Confidence 566666532 22479999999764332 2367777654431110 111 11124689999999999
Q ss_pred EEEeCC------CCccceEEEECCCC
Q 046207 129 FYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 129 ~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.+||.. |..|+...|+|++.
T Consensus 509 ~frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 509 LVQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEEEEEECC---CEECCCEEEECCC-
T ss_pred EEEEEEEcCCcccCCCCCEEEEeCCC
Confidence 999875 34466788999875
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=94.68 E-value=0.08 Score=46.61 Aligned_cols=87 Identities=22% Similarity=0.448 Sum_probs=52.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+...+...+++.|+|..+.... .-.|+|........... ...... +-...++|++|+|++.|
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~~------~~~~~~~i~~L~p~t~Y 179 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPVV------GNRLTHQIQELTLDTPY 179 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGS--EEEEEE------SSCSEEEECCCCTTCEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCce--EEEEec------CCeeEEEEcCCCCCCEE
Confidence 7888888776532379999999765322 23566765543321100 000111 11234689999999999
Q ss_pred EEEeCC------CCccceEEEECCC
Q 046207 129 FYQLGS------GNATRRFHFTTPP 147 (458)
Q Consensus 129 ~Y~v~~------g~~~~~~~f~T~p 147 (458)
.++|.. |..++...|+|..
T Consensus 180 ~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 180 YFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEEEEEEcCCccCCCCCCEEccCcc
Confidence 999875 4455567777765
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.67 E-value=0.1 Score=41.43 Aligned_cols=67 Identities=16% Similarity=0.295 Sum_probs=42.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+++.... +++.|+|.-+.... .-.|+|...... .... ... .-...++|++|+|+|.|
T Consensus 20 ~P~~l~~~~~~---~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~-~~~~-----~~~------~~~~~~~l~~L~p~t~Y 84 (116)
T 2edb_A 20 QPSSLHVRPQT---NCIIMSWTPPLNPNIVVRGYIIGYGVGSPY-AETV-----RVD------SKQRYYSIERLESSSHY 84 (116)
T ss_dssp CCSCEEEEECS---SCEEEEECCCSCTTBCCCEEEEEEEESSTT-SEEE-----EEE------TTCCEEEECSCCSSSBE
T ss_pred CCCCeEEEECC---CEEEEEEcCCCCCCCceeEEEEEEEeCCCC-eEEE-----EeC------CCeeEEEeCCCCCCCEE
Confidence 78888877653 69999998774332 236677653221 1110 111 11234689999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.+||..
T Consensus 85 ~~~V~A 90 (116)
T 2edb_A 85 VISLKA 90 (116)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.084 Score=49.51 Aligned_cols=88 Identities=14% Similarity=0.194 Sum_probs=53.8
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+...+...+++.|+|..+.... .-.|+|.......+..+... + ...-....+|++|+|+|.
T Consensus 201 ~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~-------~-~~~~~~~~~l~~L~p~t~ 272 (303)
T 1i1r_A 201 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE-------D-TASTRSSFTVQDLKPFTE 272 (303)
T ss_dssp CCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG-------G-GCSCCSEEEECSCCTTCE
T ss_pred CCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc-------c-CCCceeEEEeCCCCCCCE
Confidence 46777777654333479999999775322 23677777653333221100 0 011223568999999999
Q ss_pred EEEEeCC------CC---ccceEEEECCC
Q 046207 128 YFYQLGS------GN---ATRRFHFTTPP 147 (458)
Q Consensus 128 Y~Y~v~~------g~---~~~~~~f~T~p 147 (458)
|.+||.. |. +|+...|+|+.
T Consensus 273 Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 273 YVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 9999875 32 24567888865
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=94.55 E-value=0.062 Score=47.17 Aligned_cols=71 Identities=18% Similarity=0.153 Sum_probs=43.8
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+++..-.+ +++.|+|..+... ....|.|........... .... .-..+++|+||+|+|.|.+
T Consensus 105 ~~P~~l~v~~~t~--~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~----~~v~------~~~t~~~l~gL~p~t~Y~~ 172 (195)
T 2qbw_A 105 SVPTNLEVVAATP--TSLLISWDASYYGVSYYRITYGETGGNSPVQE----FTVP------YSSSTATISGLKPGVDYTI 172 (195)
T ss_dssp CSSCCCEEEEEET--TEEEEECCCCCSSCSEEEEEEEETTCCSCCEE----EEEE------TTCSEEEECSCCTTCEEEE
T ss_pred CCCcccEEEeCCC--CEEEEEEeCCCCCccEEEEEEEECCCCCcceE----EEeC------CCCCEEEeCCCCCCCEEEE
Confidence 4677777765543 6999999766422 234677876543221110 0111 1124578999999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 173 ~V~A 176 (195)
T 2qbw_A 173 TVYA 176 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.48 E-value=0.23 Score=46.01 Aligned_cols=96 Identities=19% Similarity=0.176 Sum_probs=56.8
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC-CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE-KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+..... +++.|+|..+.. ...-.|+|....+...... .. ......+.|++|+|++.|.+
T Consensus 114 ~~P~~l~~~~~~~--~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~ 180 (290)
T 3r8q_A 114 SPPRRARVTDATE--TTITISWRTKTETITGFQVDAVPANGQTPIQR-----TI------KPDVRSYTITGLQPGTDYKI 180 (290)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----EE------CTTCSEEEECSCCTTCEEEE
T ss_pred CCCceeEEEEcCC--CeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----ec------CCCccEEEECCCCCCCEEEE
Confidence 5788887775443 699999998753 2334677776554322111 11 01123467999999999999
Q ss_pred EeCC----CCcc-ceEEEECCCCCCCCCCeEEEEEec
Q 046207 131 QLGS----GNAT-RRFHFTTPPKVGPDVPYIFGIIGD 162 (458)
Q Consensus 131 ~v~~----g~~~-~~~~f~T~p~~~~~~~~~f~~~gD 162 (458)
+|.. |.+. ....++|.|. ....+++..+++
T Consensus 181 ~V~A~n~~g~s~~~~~~~~t~p~--~P~~l~~~~~~~ 215 (290)
T 3r8q_A 181 YLYTLNDNARSSPVVIDASTAID--APSNLRFLATTP 215 (290)
T ss_dssp EEEEEETTEECCCEEEEEECCCC--CCEEEEEEEEET
T ss_pred EEEEEeCCcccCCEEEEecCCCC--CCCccEEEeeCC
Confidence 9875 2221 2455667664 223455554443
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=94.48 E-value=0.21 Score=44.89 Aligned_cols=85 Identities=15% Similarity=0.188 Sum_probs=54.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC------CCeEEEEecCC-CCceEEEEEEEEEEecccccceEEEEEecCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY------PNVVTHWEANS-KRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 124 (458)
.+|..+.+...+.+ .++.|+|..+.... .-.|+|....+ ..+..+.. ......+.+.+|+|
T Consensus 114 dPP~nLtv~~~~~~-~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~-----------~~t~~~i~l~~L~P 181 (223)
T 3up1_A 114 EAPFDLSVVYREGA-NDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNL-----------SSTKLTLLQRKLQP 181 (223)
T ss_dssp CCCEEEEEEEETTT-TEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEE-----------SSSEEEEEGGGSCT
T ss_pred CCCcceEEEEEcCC-CCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEe-----------cCceeEEeccccCC
Confidence 47888888877654 57999999874221 23677777642 22222110 11123456789999
Q ss_pred CCEEEEEeCC-------C---CccceEEEECCCC
Q 046207 125 DTKYFYQLGS-------G---NATRRFHFTTPPK 148 (458)
Q Consensus 125 ~t~Y~Y~v~~-------g---~~~~~~~f~T~p~ 148 (458)
+|.|..||.. | .+|....|+|++.
T Consensus 182 gt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 182 AAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp TCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred CcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 9999999863 2 2356788999774
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.48 E-value=0.25 Score=45.44 Aligned_cols=97 Identities=11% Similarity=0.161 Sum_probs=57.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCC-CCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPD-EKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+....+ +++.|+|.-+. ....-.|+|.......... .... ......+.|++|+|+|.|.+
T Consensus 16 ~~P~~l~~~~~~~--~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 83 (283)
T 1tdq_A 16 DGPTQILVRDVSD--TVAFVEWTPPRAKVDFILLKYGLVGGEGGKT----TFRL------QPPLSQYSVQALRPGSRYEV 83 (283)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEESSSSCCCE----EEEE------CTTCSEEEECSCCTTCEEEE
T ss_pred CCCcEEEEEecCC--CeEEEEEECCCCceeEEEEEEEEecCCCCcE----EEEe------CCCCCEEEecCCCCCCEEEE
Confidence 4788887765554 69999999875 2233477886543321110 0111 11123568899999999999
Q ss_pred EeCC----CCc-cceEEEECCCCCCCCCCeEEEEEec
Q 046207 131 QLGS----GNA-TRRFHFTTPPKVGPDVPYIFGIIGD 162 (458)
Q Consensus 131 ~v~~----g~~-~~~~~f~T~p~~~~~~~~~f~~~gD 162 (458)
+|.. |.+ .....|+|+|.+ ...+++..+++
T Consensus 84 ~V~a~~~~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 118 (283)
T 1tdq_A 84 SISAVRGTNESDASSTQFTTEIDA--PKNLRVGSRTA 118 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EEEEECCCCCCCCeeEEEECCCCC--CCceEEEecCC
Confidence 9886 222 225567887652 23455544443
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.45 E-value=0.2 Score=42.90 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=53.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+..-. .+++.|+|..+... ..-.|+|....+. ... .... .-...+.|++|+|+|.|.+
T Consensus 8 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~~~-----~~~~------~~~~~~~i~~L~p~t~Y~~ 73 (186)
T 1qr4_A 8 DNPKDLEVSDPT--ETTLSLRWRRPVAKFDRYRLTYVSPSGK-KNE-----MEIP------VDSTSFILRGLDAGTEYTI 73 (186)
T ss_dssp CCCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECTTCC-EEE-----EEEC------TTCSEEEEESCCSSCEEEE
T ss_pred cCCCceEEEecC--CCEEEEEEeCCCCCccEEEEEEEeCCCC-eeE-----EECC------CCCCEEEECCCCCCCEEEE
Confidence 478777776544 36999999976432 2346777743321 111 1111 1122457899999999999
Q ss_pred EeCC----CCcc-ceEEEECCCCCCCCCCeEEE
Q 046207 131 QLGS----GNAT-RRFHFTTPPKVGPDVPYIFG 158 (458)
Q Consensus 131 ~v~~----g~~~-~~~~f~T~p~~~~~~~~~f~ 158 (458)
+|.. |.+. ....++|.|.+ ...+++.
T Consensus 74 ~V~a~~~~~~s~~~~~~~~t~p~~--P~~l~~~ 104 (186)
T 1qr4_A 74 SLVAEKGRHKSKPTTIKGSTVVGS--PKGISFS 104 (186)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCC--CSCEEEE
T ss_pred EEEEEcCCccCCCEEEEEECCCCC--CCccEEE
Confidence 9875 2222 25677777642 2345543
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.40 E-value=0.49 Score=43.40 Aligned_cols=99 Identities=12% Similarity=0.144 Sum_probs=56.6
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+..... +++.|+|..+... ..-.|+|....+....... .. ....-...+.|++|+|+|.|.+
T Consensus 106 ~~P~~l~~~~~~~--~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~---~~~~~~~~~~i~~L~p~t~Y~~ 175 (283)
T 1tdq_A 106 DAPKNLRVGSRTA--TSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVL-----VP---KGIGPTTKTTLTDLVPGTEYGV 175 (283)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEETTCCCCEEEE-----EE---CCSSSEEEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecCC--CeEEEEecCCCCCccEEEEEEEeCCCCcceEEE-----CC---CCCcccceEEEecCCCCCEEEE
Confidence 4677777765443 6999999987432 3346777765443221111 10 0001145678999999999999
Q ss_pred EeCC----CCcc-ceEEEECCCCCCCCCCeEEEEEec
Q 046207 131 QLGS----GNAT-RRFHFTTPPKVGPDVPYIFGIIGD 162 (458)
Q Consensus 131 ~v~~----g~~~-~~~~f~T~p~~~~~~~~~f~~~gD 162 (458)
+|.. |.+. ....+.|.|. ....+++..+++
T Consensus 176 ~V~A~n~~g~s~~~~~~~~t~~~--~P~~l~~~~~~~ 210 (283)
T 1tdq_A 176 GISAVMNSKQSIPATMNARTELD--SPRDLMVTASSE 210 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCC--CCEEEEEEEECS
T ss_pred EEEEEeCCCCCcceEEEecCCCC--CCCccEEeEecC
Confidence 9875 2221 2445666554 223455544443
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=94.23 E-value=0.16 Score=44.99 Aligned_cols=79 Identities=15% Similarity=0.266 Sum_probs=48.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCC-ceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKR-KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..++.+--.. +++.++|..+. ...+.-.|..--+.. ...+.+..+ ..+++||+|+|.|.|
T Consensus 152 ~Pp~NL~At~VT~--tSVtLsW~aP~-~~~GI~gY~ly~~g~~v~~v~~~~t-------------syt~~gLk~~TeYsF 215 (238)
T 2w1n_A 152 NPVRDFKASEINK--KNVTVTWTEPE-TTEGLEGYILYKDGKKVAEIGKDET-------------SYTFKKLNRHTIYNF 215 (238)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCS-CCTTEEEEEEEETTEEEEEEETTCC-------------EEEECSCCTTCEEEE
T ss_pred CCCCceEEEEccC--CeEEEEecCCC-CCCCceeEEEEeCCceeEEeeccce-------------EEEecCCCCCCEEEE
Confidence 4787877776543 79999999885 334455665543321 111111111 146899999999999
Q ss_pred EeCC----CCc--cceEEEECC
Q 046207 131 QLGS----GNA--TRRFHFTTP 146 (458)
Q Consensus 131 ~v~~----g~~--~~~~~f~T~ 146 (458)
||.. |.. ...-.+||.
T Consensus 216 ~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 216 KIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEEEETTSCBCCCEEEEEECC
T ss_pred EEEEEeCCCCccccCcEEEEec
Confidence 9975 432 235556664
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.22 E-value=0.22 Score=43.39 Aligned_cols=83 Identities=13% Similarity=0.162 Sum_probs=47.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCC-CCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANS-KRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+.. . .+++.|+|..+.... .-.|+|..... ..+...... .. . . .....+ +|+|+|.
T Consensus 8 ~P~~~~~~~-~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---~~--~--~--~~~~~~-~L~p~t~ 74 (205)
T 1cfb_A 8 APKLTGITC-Q--ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK---VP--N--T--DSSFVV-QMSPWAN 74 (205)
T ss_dssp CCEEEEEEE-C--SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE---EE--T--T--CSEEEE-ECCSSEE
T ss_pred CCCCcEEEe-c--CCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeec---cC--C--C--ceEEEE-eCCCCCE
Confidence 788888877 3 479999999764222 23567765432 222222111 11 0 1 112345 9999999
Q ss_pred EEEEeCC----C--Ccc-ceEEEECCCC
Q 046207 128 YFYQLGS----G--NAT-RRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~----g--~~~-~~~~f~T~p~ 148 (458)
|.|||.. | ..+ ....++|.+.
T Consensus 75 Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 75 YTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 9999875 2 223 3456777653
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.19 E-value=0.11 Score=45.24 Aligned_cols=71 Identities=28% Similarity=0.280 Sum_probs=43.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCC--CCCCCeEEEEecCCCC-ceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPD--EKYPNVVTHWEANSKR-KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~--~~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
+|.+|.++.-....+++.|+|..+. ....-.|+|....... +... ... .-...++|++|+|+|.|.
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~ 70 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA-----TIP------GHLNSYTIKGLKPGVVYE 70 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEE-----EEC------TTCCEEEECSCCTTEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEE-----ecC------CCccEEEecCCCCCCEEE
Confidence 4667666553322479999999863 1223467787654321 1111 111 112357899999999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
+||..
T Consensus 71 ~~V~a 75 (201)
T 2ha1_A 71 GQLIS 75 (201)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=94.15 E-value=0.11 Score=49.90 Aligned_cols=73 Identities=14% Similarity=0.196 Sum_probs=45.2
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCC--CCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPD--EKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
.+|..+.+....+. +++.|+|..+. ....-.|+|....+........ .. ......++|++|+|+|.|.
T Consensus 3 ~~P~~l~~~~~~~~-~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~------~~~~~~~~i~~L~p~t~Y~ 72 (368)
T 1fnf_A 3 SPPTNLHLEANPDT-GVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VV------HADQSSCTFDNLSPGLEYN 72 (368)
T ss_dssp CCCEEEEEEECSSS-SCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEE---EE------CTTCCEEECCCCCTTSCEE
T ss_pred CCCcceEEEecCCC-cEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEE---Ee------cCCcCEEEECCCCCCCEEE
Confidence 36888888755432 46999999864 1223477777655432111110 11 1112457899999999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
|||..
T Consensus 73 ~~V~a 77 (368)
T 1fnf_A 73 VSVYT 77 (368)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=94.04 E-value=0.17 Score=48.79 Aligned_cols=72 Identities=14% Similarity=0.206 Sum_probs=44.9
Q ss_pred CCCccEEEEecCCCCC-ceEEEEEcCC--CCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 52 NAPEQVHITQGDHDGR-SVIVSWVTPD--EKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~-~~~i~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
.+|..|.+....+ + ++.|+|..+. ....-.|+|....+........ ... .-...+.|++|+|+|.|
T Consensus 4 ~~P~~l~~~~~~~--~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~---~~~------~~~~~~~i~~L~p~t~Y 72 (375)
T 3t1w_A 4 SPPTNLHLEANPD--TGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VVH------ADQSSCTFDNLSPGLEY 72 (375)
T ss_dssp CCCEEEEEEEETT--TTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEE---EEE------TTCCEEEECCCCTTCCE
T ss_pred CCCCccEEEecCC--CeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeE---EcC------CCccEEEEcCCcCCCEE
Confidence 3687777776443 5 9999999774 2233477787755422111110 111 11245689999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.++|..
T Consensus 73 ~~~V~a 78 (375)
T 3t1w_A 73 NVSVYT 78 (375)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.02 E-value=0.24 Score=39.82 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=42.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+++.... +++.|+|.-+.... .-.|+|.... ..... ... ..-...++|++|+|+|.|
T Consensus 30 ~P~~l~~~~~~---~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~~~~~-----~~~------~~~~~~~~i~~L~p~t~Y 94 (126)
T 1x5i_A 30 VPSSLHVRPLV---TSIVVSWTPPENQNIVVRGYAIGYGIGS-PHAQT-----IKV------DYKQRYYTIENLDPSSHY 94 (126)
T ss_dssp SCSEEEEEEET---TEEEEEEECCSCTTBCCCEEEEEECSSC-GGGEE-----EEC------CTTCCEEEECSCCSSCEE
T ss_pred CCCeeEEEecC---CEEEEEEcCCCCCCCCEeEEEEEEEcCC-CCceE-----EEe------CCCeeEEEEeCCCCCCEE
Confidence 78888887763 69999999875332 2355665321 11110 010 122345689999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.+||..
T Consensus 95 ~~~V~A 100 (126)
T 1x5i_A 95 VITLKA 100 (126)
T ss_dssp CCEEEE
T ss_pred EEEEEE
Confidence 999875
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=93.85 E-value=0.21 Score=43.80 Aligned_cols=70 Identities=16% Similarity=0.181 Sum_probs=44.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC--CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE--KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|..+.+....+ +++.|+|..+.. ...-.|+|....+..... .... ..-...++|++|+|+|.|.+
T Consensus 116 ~P~~l~~~~~~~--~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 183 (203)
T 2gee_A 116 PPTDLRFTNIGP--DTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA----ELSI------SPSDNAVVLTNLLPGTEYVV 183 (203)
T ss_dssp CCEEEEEEEEET--TEEEEEEECCSSCCCSEEEEEEEETTCGGGCE----EEEE------CTTCCEEEECSCCTTCEEEE
T ss_pred CCCceEEEEcCC--CEEEEEEcCCCCCCccEEEEEEEECCCCCccE----EEEc------CCCcCEEEECCCCCCCEEEE
Confidence 688877665443 699999998742 223467777644321111 0011 11233568899999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 184 ~V~A 187 (203)
T 2gee_A 184 SVSS 187 (203)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.84 E-value=0.25 Score=43.37 Aligned_cols=88 Identities=19% Similarity=0.216 Sum_probs=49.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+... ..++.++|..+... +.+ .|+|.......+.... +... ........+|.+|+|++.
T Consensus 116 ~p~~~~~~~~---~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~-----~~~~--~~~~~~~l~i~~L~~~~~ 185 (215)
T 3mtr_A 116 SPSIDQVEPY---SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW-----YDAK--EASMEGIVTIVGLKPETT 185 (215)
T ss_dssp CCEEEEEEEE---TTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEE-----EEHH--HHHHHTEEEEECCCTTCE
T ss_pred CCcceEEEEe---cceEEEEEecCCccCCCceEEEEEEEEECCCCcccccc-----cccc--cccccccEEECCCCCCCE
Confidence 4555555432 35899999865322 222 4677766544333211 1100 001113567899999999
Q ss_pred EEEEeCC----C--CccceEEEECCCCCC
Q 046207 128 YFYQLGS----G--NATRRFHFTTPPKVG 150 (458)
Q Consensus 128 Y~Y~v~~----g--~~~~~~~f~T~p~~~ 150 (458)
|.|||.. | ..+..-.|+|+|..+
T Consensus 186 y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 186 YAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred EEEEEEEEeCCcccCcccceeeEeccccC
Confidence 9999875 3 335577899998643
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.82 E-value=0.023 Score=44.41 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=43.9
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCc-eEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRK-HKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
.+|..+++..-.+ +++.|+|..+... ..-.|+|....+... ... . ...-...++|++|+|+|.|.
T Consensus 9 ~~P~~l~v~~~t~--~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~-----~------v~~~~~~~~l~~L~p~t~Y~ 75 (105)
T 2ekj_A 9 SPPSNLALASETP--DSLQVSWTPPLGRVLHYWLTYAPASGLGPEKSV-----S------VPGARSHVTLPDLQAATKYR 75 (105)
T ss_dssp CCCEEEEEEEEET--TEEEEEEECCSSCCSBBCBBCCCTTSCSCCCCB-----C------CBTTSSEEEECSCCSSCCCB
T ss_pred CCCCceEEEeCCC--CEEEEEEeCCCCcceEEEEEEEECCCCCccEEE-----E------eCCCcCEEEeCCCCCCCEEE
Confidence 4688888775543 6999999887422 234566765433211 000 0 01112456899999999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
++|..
T Consensus 76 ~~V~A 80 (105)
T 2ekj_A 76 VLVSA 80 (105)
T ss_dssp CBBCB
T ss_pred EEEEE
Confidence 99886
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=93.69 E-value=0.18 Score=44.96 Aligned_cols=86 Identities=15% Similarity=0.214 Sum_probs=54.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC------CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK------YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..|++...+. ++..|+|..+... -.-.|+|....+. +... ..... ..-...+.|.+|+||
T Consensus 107 ~pP~~l~~~~~~~--~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~--~~~~~------~~~~~~~~l~~L~p~ 175 (214)
T 2b5i_B 107 MAPISLQVVHVET--HRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEA--PLLTL------KQKQEWICLETLTPD 175 (214)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTS--CCEEE------CSCCCEEEECSCCTT
T ss_pred CCCceEEEEEecC--CeEEEEECCCCccccCCCceEEEEEEecCCCC-hhee--eeeee------cccceEEEeccCCCC
Confidence 5788888886554 5899999987532 1346777765431 1110 00010 112346778999999
Q ss_pred CEEEEEeCC----------CCccceEEEECCCC
Q 046207 126 TKYFYQLGS----------GNATRRFHFTTPPK 148 (458)
Q Consensus 126 t~Y~Y~v~~----------g~~~~~~~f~T~p~ 148 (458)
|.|..||.. +.+|+...|+|.|.
T Consensus 176 t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 176 TQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp CEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred CEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 999999874 13456788999875
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.66 E-value=0.24 Score=43.25 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=48.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCC--CC----CCCeEEEEecCCCC-ceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPD--EK----YPNVVTHWEANSKR-KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~--~~----~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
+|..+.+.... .+++.|+|..+. .. ..-.|+|....... ..... . .......++|++|+|+
T Consensus 107 ~P~~~~~~~~~--~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~-----~-----~~~~~~~~~i~~L~p~ 174 (205)
T 1cfb_A 107 NPDNVVGQGTE--PNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN-----I-----FDWRQNNIVIADQPTF 174 (205)
T ss_dssp CCSCCEEECSS--TTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE-----E-----CCTTCCEEEECSCCSS
T ss_pred CCeeeEeecCC--CCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE-----e-----cCCCccEEEEcCCCCC
Confidence 57777766443 369999998764 11 12366776655432 11111 0 0111245678999999
Q ss_pred CEEEEEeCC------CC-ccceEEEECC
Q 046207 126 TKYFYQLGS------GN-ATRRFHFTTP 146 (458)
Q Consensus 126 t~Y~Y~v~~------g~-~~~~~~f~T~ 146 (458)
|.|.+||.. |. ++..-.++|.
T Consensus 175 t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 175 VKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 999999875 33 3345555654
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.63 E-value=0.25 Score=46.41 Aligned_cols=86 Identities=12% Similarity=0.091 Sum_probs=51.6
Q ss_pred CCCccEEEEecCC----CCCceEEEEEcCCCCC----CCeEEEE-ecCCCCceEEEEEEEEEEecccccceEEEEEecCC
Q 046207 52 NAPEQVHITQGDH----DGRSVIVSWVTPDEKY----PNVVTHW-EANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRL 122 (458)
Q Consensus 52 ~~p~~v~~~~~~~----~~~~~~i~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL 122 (458)
.+|..+.+..... ..+++.|+|..+...+ .-.|+|. ......+..+... ......+.|++|
T Consensus 204 ~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L 273 (313)
T 2d9q_B 204 EPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPL----------PLEALQYELCGL 273 (313)
T ss_dssp CCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEE----------CSCEEEEEECSC
T ss_pred CcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccc----------cCcceEEEEeCC
Confidence 4676665554321 2379999999764222 2467787 4443333322110 112356789999
Q ss_pred CCCCEEEEEeCC------CC---ccceEEEECCC
Q 046207 123 KYDTKYFYQLGS------GN---ATRRFHFTTPP 147 (458)
Q Consensus 123 ~p~t~Y~Y~v~~------g~---~~~~~~f~T~p 147 (458)
+|+|.|..||.. |. +|....++|+.
T Consensus 274 ~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 274 LPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp CSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred CCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 999999999874 32 34567788865
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.62 E-value=0.3 Score=41.84 Aligned_cols=69 Identities=19% Similarity=0.333 Sum_probs=44.2
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..+.+..... +++.|+|..+.... .-.|+|.............. + ....++++|+|++
T Consensus 104 ~~p~~~~~~~~~~--~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------~-----~~~~~~~~L~p~t 169 (197)
T 3lpw_A 104 LPPGKITLMDVTR--NSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATV-------K-----VTEATITGLIQGE 169 (197)
T ss_dssp CCCSCEEEEEECS--SCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEEE-------S-----SSEEEECCCCTTC
T ss_pred CCCcccEEEeccC--CeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeecc-------c-----ccEEEeCCcCCCC
Confidence 4777887765443 69999998764322 23667776554332221110 1 1236789999999
Q ss_pred EEEEEeCC
Q 046207 127 KYFYQLGS 134 (458)
Q Consensus 127 ~Y~Y~v~~ 134 (458)
.|.|+|..
T Consensus 170 ~Y~~~V~A 177 (197)
T 3lpw_A 170 EYSFRVSA 177 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999985
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=93.62 E-value=0.24 Score=47.76 Aligned_cols=73 Identities=23% Similarity=0.393 Sum_probs=42.6
Q ss_pred CCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC----C--
Q 046207 66 GRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS----G-- 135 (458)
Q Consensus 66 ~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----g-- 135 (458)
.+++.|+|.-+...+ .-.|+|.......+... ... ..-....+|++|+|+|.|.+||.. |
T Consensus 306 ~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s 375 (389)
T 2jll_A 306 GKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE----KKV------QGNKDHIILEHLQWTMGYEVQITAANRLGYS 375 (389)
T ss_dssp TTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBC----CEE------CTTCCEEEECSCCTTCEEEEEEEEEC-CCBC
T ss_pred CCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeE----eec------cCCcceEEeCCcCCCCEEEEEEEEEcCCcCC
Confidence 379999998654222 23566665332211100 000 111234678999999999999875 3
Q ss_pred CccceEEEECCCCC
Q 046207 136 NATRRFHFTTPPKV 149 (458)
Q Consensus 136 ~~~~~~~f~T~p~~ 149 (458)
..+ ...|+|++.|
T Consensus 376 ~~s-~~~~~T~~~P 388 (389)
T 2jll_A 376 EPT-VYEFSMPPKP 388 (389)
T ss_dssp CCE-EEEEECCCCC
T ss_pred Cce-eeEecCCCCC
Confidence 334 4589998875
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=93.50 E-value=0.27 Score=42.99 Aligned_cols=70 Identities=19% Similarity=0.200 Sum_probs=41.1
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+.... .+++.|+|..+...+ .-.|+|....+ .+... ... ..-...++|++|+|+|.
T Consensus 111 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~----~~~------~~~~~~~~i~~L~p~t~ 177 (209)
T 2vkw_A 111 SAPKLEGQMGED--GNSIKVNLIKQDDGGSPIRHYLVRYRALSS-EWKPE----IRL------PSGSDHVMLKSLDWNAE 177 (209)
T ss_dssp CCCEEEEEECTT--SSCEEEEEECCCCTTSCCCEEEEEEEETTS-CCCCC----EEE------CTTCCEEEECSCCTTCE
T ss_pred CCCccccccccc--CCeEEEEEECcccCCCCCceEEEEEECCCC-CCcee----eec------CCCccEEEecCCCCCCE
Confidence 356665554333 379999999863222 23677776222 11110 010 01123467999999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.+||..
T Consensus 178 Y~~~V~A 184 (209)
T 2vkw_A 178 YEVYVVA 184 (209)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=93.29 E-value=0.32 Score=42.56 Aligned_cols=79 Identities=20% Similarity=0.247 Sum_probs=42.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCC-CCceEEEEEEEEEEec--ccccceEEEEEecCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANS-KRKHKTHSIIKTYRYF--NYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~ 125 (458)
+|..+.+..-. .+++.|+|.-+...+. -.|+|..... ..+...... ..+... +....-...+++++|+|+
T Consensus 4 pP~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 4 PPTPPNVTRLS--DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDN-IPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCCEEEEEE--TTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCC-EECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCCEeeEec--CCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccc-cCccccccccccCcceeEEecCCcCC
Confidence 45555554433 3699999987653332 2456665432 222221110 000000 000123456789999999
Q ss_pred CEEEEEeCC
Q 046207 126 TKYFYQLGS 134 (458)
Q Consensus 126 t~Y~Y~v~~ 134 (458)
|.|.|||..
T Consensus 81 t~Y~~~V~A 89 (214)
T 2ibg_A 81 HTYRFRILA 89 (214)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999874
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.15 E-value=0.2 Score=39.59 Aligned_cols=70 Identities=17% Similarity=0.165 Sum_probs=41.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.... .+++.|+|..+.... .-.|+|.......... .... ..-...++|++|+|+|.|
T Consensus 20 ~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y 87 (119)
T 1wfn_A 20 PVGHLSFSEIL--DTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV----THYL------PNVTLEYRVTGLTALTTY 87 (119)
T ss_dssp CCSCCEEESCC--SSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC----CEEE------CSSCCEEEEESCCTTCEE
T ss_pred CCCceEEEECC--CCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceE----EEEe------CCCceEEEEcCCCCCCEE
Confidence 56677665443 369999998764322 2356666544221110 0010 112345678999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.+||..
T Consensus 88 ~~~V~A 93 (119)
T 1wfn_A 88 TIEVAA 93 (119)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=92.89 E-value=0.47 Score=42.43 Aligned_cols=83 Identities=14% Similarity=0.224 Sum_probs=51.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..|++...+. .+++.|+|..+.... .-.|+|....+..+.... ... .. ...+.|.+|+|+|
T Consensus 123 ~pP~~l~~~~~~~-~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~----~~~----~~--~~~~~l~~L~p~t 191 (227)
T 1eer_B 123 DAPVGLVARLADE-SGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV----EIL----EG--RTECVLSNLRGRT 191 (227)
T ss_dssp CCCEEEEEEECSS-TTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE----EEC----TT--CCEEEECCCCSSC
T ss_pred CcCcceEEEEcCC-CCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE----EEe----cC--ceEEEEcccCCCC
Confidence 4788888886432 269999998875321 236777765433221100 000 01 2356789999999
Q ss_pred EEEEEeCC-----------CCccceEEEEC
Q 046207 127 KYFYQLGS-----------GNATRRFHFTT 145 (458)
Q Consensus 127 ~Y~Y~v~~-----------g~~~~~~~f~T 145 (458)
.|..||.. |.+|....|+|
T Consensus 192 ~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 192 RYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp EEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred eEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 99999874 22345667887
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=92.39 E-value=0.16 Score=45.64 Aligned_cols=89 Identities=18% Similarity=0.236 Sum_probs=50.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+..... +++.|+|..+.... .-.|+|....+..... +....... ........+|++|+|+|.|
T Consensus 101 ~P~~l~~~~~~~--~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~~L~p~t~Y 173 (234)
T 3f7q_A 101 EPGRLAFNVVSS--TVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLV---DNPKNRMLLIENLRESQPY 173 (234)
T ss_dssp CCCCCEEEECSS--SCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECCC---SCTTCCEEEEECCCTTCCE
T ss_pred CCCccEEEEecC--CEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEEe---cCCcceEEEeCCCCCCCeE
Confidence 577777775443 69999998764322 2366777654432110 00011100 1112235689999999999
Q ss_pred EEEeCC------CCccc-eEEEECCCC
Q 046207 129 FYQLGS------GNATR-RFHFTTPPK 148 (458)
Q Consensus 129 ~Y~v~~------g~~~~-~~~f~T~p~ 148 (458)
.++|.. |..+. ...|+|.+.
T Consensus 174 ~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 174 RYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEEEEEECCCccCCCcCceeEeecCCC
Confidence 999875 33333 466777654
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.24 E-value=0.26 Score=39.17 Aligned_cols=78 Identities=14% Similarity=0.239 Sum_probs=47.0
Q ss_pred CCccEEEEecCCCCCceEEEEEcCC--CCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPD--EKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~--~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..+.+.. . .+++.|+|.-+. .... -.|.|.......... +.. + . ..+++. |+|+|
T Consensus 21 ~P~~v~~~~--~-~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~-------~~~-~---~--~~~~~~-L~~~t 83 (117)
T 1wj3_A 21 PPGNVVWNA--T-DTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV-------LNT-N---K--TSAELV-LPIKE 83 (117)
T ss_dssp CCCSCBCCE--E-TTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEE-------EEE-S---S--SEEEEE-CCCSS
T ss_pred CCccEEEEE--e-CCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeE-------EeC-C---C--cEEEEE-CCCCC
Confidence 576666654 2 368999998762 1222 255666554332211 110 1 1 245666 99999
Q ss_pred EEEEEeCC------CCccceEEEECCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPP 147 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p 147 (458)
.|.+||.. |..++.-.|+|..
T Consensus 84 ~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 84 DYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp CEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 99999875 4455577888865
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=92.20 E-value=0.18 Score=38.76 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=37.0
Q ss_pred CCCceEEEEEcCCCC-CCCeEEEEecCCCCc---eEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 65 DGRSVIVSWVTPDEK-YPNVVTHWEANSKRK---HKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 65 ~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
..+++.|+|..+... ..-.|+|....+... ..+. +-.-.+.|+||+|+|.|.-+|..
T Consensus 18 t~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~~~~v~-------------g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 18 TASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLP-------------STATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp GGGCEEEECCCSCTTEEEEEEEEEETTTCCCCEEEEEE-------------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCeEEEEECCCCCCccEEEEEEEeCCCCCcceEEECC-------------CCccEEEECCCCCCCEEEEEEEE
Confidence 346899999876432 335778887654321 1111 12245789999999999888764
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=92.12 E-value=0.43 Score=43.98 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=46.7
Q ss_pred cEEEEecCCCCCceEEEEEcCC-----C-CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 56 QVHITQGDHDGRSVIVSWVTPD-----E-KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 56 ~v~~~~~~~~~~~~~i~W~t~~-----~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
++.+.... .+++.|+|.... . ...-.|+|....+.. ... ... .-....+|++|+|+|.|.
T Consensus 202 ~~~~~~~~--~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~~-----~~~------~~~~~~~~~~L~p~t~Y~ 267 (290)
T 3l5i_A 202 TVRTKKVG--KNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TAV-----NVD------SSHTEYTLSSLTSDTLYM 267 (290)
T ss_dssp CEEEEEEC--SSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EEE-----EEE------TTCSEEEECSCCTTCEEE
T ss_pred eeeEeecc--CCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EEE-----EeC------CCceEEEeCCCCCCCEEE
Confidence 55554333 369999997321 1 123467777654421 111 111 112346899999999999
Q ss_pred EEeCC----C-CccceEEEECCC
Q 046207 130 YQLGS----G-NATRRFHFTTPP 147 (458)
Q Consensus 130 Y~v~~----g-~~~~~~~f~T~p 147 (458)
++|.. | ..+....|+|+|
T Consensus 268 ~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 268 VRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEeCCCCCCCCceEeecCC
Confidence 99975 3 334578888865
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=91.99 E-value=0.17 Score=45.89 Aligned_cols=83 Identities=18% Similarity=0.234 Sum_probs=49.4
Q ss_pred CCCccEEEEecCC--CC--CceEEEEEcCCCC--------CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEe
Q 046207 52 NAPEQVHITQGDH--DG--RSVIVSWVTPDEK--------YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATI 119 (458)
Q Consensus 52 ~~p~~v~~~~~~~--~~--~~~~i~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (458)
.+|..|+++.-.. .. .++.|+|..+... -.-.|+|....+..+..... .-...+.|
T Consensus 132 ~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~~------------~~~~~~~l 199 (236)
T 1axi_B 132 DPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP------------ILTTSVPV 199 (236)
T ss_dssp CCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC------------BSSSEEEE
T ss_pred CCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEec------------cCCCEEEE
Confidence 4687776554432 11 3599999987522 12356677665433222110 01235678
Q ss_pred cCCCCCCEEEEEeCC----C----CccceEEEECC
Q 046207 120 KRLKYDTKYFYQLGS----G----NATRRFHFTTP 146 (458)
Q Consensus 120 ~gL~p~t~Y~Y~v~~----g----~~~~~~~f~T~ 146 (458)
.+|+|+|.|..||.. | .+|+...|+|+
T Consensus 200 ~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 200 YSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred eccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 899999999999985 3 23456667664
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=91.95 E-value=0.19 Score=50.40 Aligned_cols=71 Identities=18% Similarity=0.170 Sum_probs=45.1
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC--CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE--KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
..|..+++.-... ++++|+|..+.. ...-.|+|......... ...... .-..+++|+||+|||.|.
T Consensus 371 ~~~~~l~~~~~~~--~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~----~~~~~~------~~~~~~~i~~L~p~t~Y~ 438 (461)
T 3csg_A 371 SVPTNLEVVAATP--TSLLISWDASYSSSVSYYRITYGETGGNSPV----QEFTVP------GSKSTATISGLSPGVDYT 438 (461)
T ss_dssp CSSCCCEEEEECS--SCEEEECCCTTGGGCSEEEEEEEETTCCSCC----EEEEEE------TTCCEEEECSCCTTCEEE
T ss_pred CCCcceEEeccCC--CeEEEEecCCCCCcceEEEEEEEECCCCccc----eEEEec------CCCceEEecCCCCCCEEE
Confidence 3577888887665 599999987621 12347778776432100 111111 112558999999999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
.+|..
T Consensus 439 ~~v~a 443 (461)
T 3csg_A 439 ITVYA 443 (461)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=91.92 E-value=0.84 Score=43.13 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=46.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC--C----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK--Y----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~--~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..+.+.......+++.|+|..+... + .-.|+|.......+..+.- ......+.|.+|+|+
T Consensus 198 ~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-----------~~~~~~~~l~~L~p~ 266 (325)
T 1n26_A 198 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWSG 266 (325)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCTT
T ss_pred CCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-----------cCCceEEEEeCCCCC
Confidence 4788888876543336999999987531 1 2357777765433332210 011235679999999
Q ss_pred CEEEEEeCC
Q 046207 126 TKYFYQLGS 134 (458)
Q Consensus 126 t~Y~Y~v~~ 134 (458)
+.|..||..
T Consensus 267 t~Y~~rVrA 275 (325)
T 1n26_A 267 LRHVVQLRA 275 (325)
T ss_dssp CCEEEEEEE
T ss_pred CeEEEEEEE
Confidence 999999875
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=91.71 E-value=1.2 Score=42.35 Aligned_cols=97 Identities=12% Similarity=0.145 Sum_probs=54.1
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC-CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY-PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+.... .+++.|+|..+.... .-.|+|........... .... .-...+.+++|+|++.|.+
T Consensus 187 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~----~~~~------~~~~~~~i~~L~p~t~Y~~ 254 (368)
T 1fnf_A 187 DSPTGIDFSDIT--ANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE----DRVP------HSRNSITLTNLTPGTEYVV 254 (368)
T ss_dssp CCCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECSCCSSCCEE----EEEE------TTCCEEEEESCCTTCEEEE
T ss_pred CCCCccEEEEcc--CCEEEEEEeCCCCCcCEEEEEEecCCCCCCccE----EEeC------CCcCEEEECCCCCCCEEEE
Confidence 367666665433 479999998765322 24667766543211110 1111 1123467899999999999
Q ss_pred EeCC----CCcc-ceEEEECCCCCCCCCCeEEEEEec
Q 046207 131 QLGS----GNAT-RRFHFTTPPKVGPDVPYIFGIIGD 162 (458)
Q Consensus 131 ~v~~----g~~~-~~~~f~T~p~~~~~~~~~f~~~gD 162 (458)
+|.. |.+. ....+.|.|.+ ...+++..+++
T Consensus 255 ~V~A~n~~g~~~~~~~~~~t~p~~--P~~l~~~~~~~ 289 (368)
T 1fnf_A 255 SIVALNGREESPLLIGQQSTVSDV--PRDLEVVAATP 289 (368)
T ss_dssp EEEEEETTEECCCEEEEEECCCCS--CEEEEEEEEET
T ss_pred EEEEEeCCccCCcccccccCCCCC--CCeeEEEecCC
Confidence 9875 2221 13456676642 23455544444
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=91.67 E-value=1.3 Score=40.70 Aligned_cols=72 Identities=14% Similarity=0.106 Sum_probs=42.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC-CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE-KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.+...+ +++.|+|..+.. ...-.|+|............ ..... ........+++|+|+|.|.++
T Consensus 104 p~~~~~~~~~~---~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~L~p~t~Y~~~ 173 (290)
T 3l5i_A 104 PVMDLKAFPKD---NMLWVEWTTPRESVKKYILEWCVLSDKAPCITD--WQQED-----GTVHRTYLRGNLAESKCYLIT 173 (290)
T ss_dssp CCEEEEEEEET---TEEEEEEECCSSCCCEEEEEEEEECSSSCCCCE--EEEEE-----TTCSEEECCSCCCTTCEEEEE
T ss_pred ccceeEEEeCC---CeEEEEEeCCCCCCCcEEEEEEECCCCCCCCcC--eEEcc-----CCCcceEEecCcCCccEEEEE
Confidence 45556665543 599999988753 23346778765543210000 00111 112345668999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 174 V~A 176 (290)
T 3l5i_A 174 VTP 176 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.35 E-value=0.64 Score=40.89 Aligned_cols=72 Identities=10% Similarity=-0.024 Sum_probs=40.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC---CCeEEEEecCC-CCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY---PNVVTHWEANS-KRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+++..... .+++.|+|..+.... .-.|+|....+ ..+..+... ..-...+.|.+|+|+|.
T Consensus 111 ~pP~~l~v~~~~~-~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L~p~t~ 179 (206)
T 3v6o_A 111 LPPSSVKAEITIN-IGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEVY----------DAKSKSVSLPVPDLCAV 179 (206)
T ss_dssp CCCCSCEEEEETT-TTEEEEEC--------CEEEEEEEEESSSSCCCEEEEEC----------C---CEEEECCSCTTSC
T ss_pred CCCCceEeEEecC-CCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEecc----------cCcceeEEeecCCCCCE
Confidence 4677777776533 369999999874321 23567776542 222221100 01123578999999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|..||..
T Consensus 180 Y~vqVRa 186 (206)
T 3v6o_A 180 YAVQVRC 186 (206)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999874
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.32 E-value=1.1 Score=47.17 Aligned_cols=93 Identities=22% Similarity=0.317 Sum_probs=50.3
Q ss_pred CCCCCccEEEEecCCCCC---ceEEEEEcCCCCCC----CeEEEEec-CCC-CceEEEEEEEEEEecccccceEEEEEec
Q 046207 50 GFNAPEQVHITQGDHDGR---SVIVSWVTPDEKYP----NVVTHWEA-NSK-RKHKTHSIIKTYRYFNYSSGYIHHATIK 120 (458)
Q Consensus 50 ~~~~p~~v~~~~~~~~~~---~~~i~W~t~~~~~~----~~v~y~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (458)
...+|..|.+....-..+ ++.|+|.-+..... -.|+|... ... ......-..... .+-...++|+
T Consensus 266 pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v------~~~~~~~~l~ 339 (680)
T 1zlg_A 266 APPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTT------DGFQNSVILE 339 (680)
T ss_pred CCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEE------cCCeeEEEeC
Confidence 345788887765411235 99999986642222 35566522 110 000000000011 1223567899
Q ss_pred CCCCCCEEEEEeCC----C--Cccce---EEEECCCC
Q 046207 121 RLKYDTKYFYQLGS----G--NATRR---FHFTTPPK 148 (458)
Q Consensus 121 gL~p~t~Y~Y~v~~----g--~~~~~---~~f~T~p~ 148 (458)
+|+|+|.|.+||.. | ..+.. -.++|.+.
T Consensus 340 ~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 340 KLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 99999999999875 3 22222 67777654
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=89.92 E-value=1.1 Score=42.98 Aligned_cols=84 Identities=17% Similarity=0.140 Sum_probs=49.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC--CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE--KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|..+.+.... .+++.|+|..+.. ...-.|+|.......... .... ..-....++++|+|++.|.+
T Consensus 189 ~p~~l~~~~~~--~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 256 (375)
T 3t1w_A 189 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA----ELSI------SPSDNAVVLTNLLPGTEYVV 256 (375)
T ss_dssp CCEEEEEESCC--SSCEEEEEECCSSCCCCEEEEEEEEGGGTTCCE----EEEE------CTTCCEEEECSCCTTCEEEE
T ss_pred CCceeEEEecc--cCEEEEEEcCCCCCCccEEEEEEEeCCCCCCcE----EEEc------CCCcCEEEeCCCCCCCEEEE
Confidence 67777665443 3799999998631 133467777654321111 0011 11124567899999999999
Q ss_pred EeCC----CCcc-ceEEEECCCC
Q 046207 131 QLGS----GNAT-RRFHFTTPPK 148 (458)
Q Consensus 131 ~v~~----g~~~-~~~~f~T~p~ 148 (458)
+|.. |.+. ....++|.|.
T Consensus 257 ~V~A~~~~g~s~~~~~~~~t~p~ 279 (375)
T 3t1w_A 257 SVSSVYEQHESTPLRGRQKTGLD 279 (375)
T ss_dssp EEEEEETTEECCCEEEEEECCCC
T ss_pred EEEEEcCCCcCCceeeEEecCCC
Confidence 9875 2221 2445667654
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.41 E-value=1.1 Score=39.24 Aligned_cols=79 Identities=14% Similarity=0.254 Sum_probs=47.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC--------------CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK--------------YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHAT 118 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~--------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (458)
+| .|++...+ +++.|+|..+... -.-.|.|+........... . . ...++
T Consensus 96 PP-~v~~~~~~---~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~------~--~-----~~~~~ 158 (201)
T 3lqm_A 96 PP-GMQVEVLA---DCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT------P--Q-----YDFEV 158 (201)
T ss_dssp CC-EEEEEEET---TEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC------C--S-----SSEEE
T ss_pred CC-EEEEEEeC---CEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE------e--c-----CceEE
Confidence 44 57775443 5999999876411 2235556654432221111 0 1 12378
Q ss_pred ecCCCCCCEEEEEeCC--------CCccceEEEECCCC
Q 046207 119 IKRLKYDTKYFYQLGS--------GNATRRFHFTTPPK 148 (458)
Q Consensus 119 l~gL~p~t~Y~Y~v~~--------g~~~~~~~f~T~p~ 148 (458)
|++|+|+|.|..+|.. |..|+...|+|.+.
T Consensus 159 l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 159 LRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp ECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred EecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 9999999999999864 33456777888763
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=88.90 E-value=0.55 Score=47.51 Aligned_cols=88 Identities=18% Similarity=0.269 Sum_probs=52.6
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..|++.... .+++.|+|..+..... -.|+|.......+.. .. ... . ...-.+.+.|.+|+|+|.
T Consensus 388 ~PP~nl~v~~~s--~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~-~~---~~~--~-~~~~~~~v~l~~L~P~T~ 458 (488)
T 2q7n_A 388 HDPTSLKVKDIN--STVVTFSWYLPGNFTKINLLCQIEICKANSKKEVR-NA---TIR--G-AEDSTYHVAVDKLNPYTA 458 (488)
T ss_dssp CCCEEEEEEECS--TTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEE-EE---EEE--C-CEEEEEEEEECSCCSSCC
T ss_pred CCCeEEEEEecC--CCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceE-EE---EEe--c-CCCcEEEEEeCCCCCCce
Confidence 478777766533 3699999998743322 256666654322211 00 110 0 012345678999999999
Q ss_pred EEEEeCC-----C---CccceEEEECCCC
Q 046207 128 YFYQLGS-----G---NATRRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~-----g---~~~~~~~f~T~p~ 148 (458)
|..||.. | .+|+...|+|++.
T Consensus 459 Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 459 YTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp BBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred EEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 9999863 3 3345667888763
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.64 E-value=4.4 Score=37.81 Aligned_cols=77 Identities=21% Similarity=0.383 Sum_probs=45.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-----------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-----------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKR 121 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 121 (458)
+|. |.+...+ +++.|+|. +.... .-.|.|+...........+. ...++|.+
T Consensus 104 pP~-v~~~~~~---~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~~-------------~~~~~l~~ 165 (306)
T 3s98_A 104 PPE-VHLEAED---KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENI-------------YSRHKIYK 165 (306)
T ss_dssp CCE-EEEEECS---SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEEEE-------------CTEEEECS
T ss_pred CCe-EEEEEcC---CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEecc-------------cceEEEcc
Confidence 454 7776543 48999999 42211 11566666554332221110 13478999
Q ss_pred CCCCCEEEEEeCC--------CCccceEEEECCC
Q 046207 122 LKYDTKYFYQLGS--------GNATRRFHFTTPP 147 (458)
Q Consensus 122 L~p~t~Y~Y~v~~--------g~~~~~~~f~T~p 147 (458)
|+|+|.|..+|.. |..|+...++|..
T Consensus 166 L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 166 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp CCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred CCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 9999999999853 4445566777754
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.63 E-value=0.89 Score=40.50 Aligned_cols=87 Identities=14% Similarity=0.125 Sum_probs=52.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC---------CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK---------YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRL 122 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~---------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL 122 (458)
.+|..|.+.. ...+.|+|..+... -.-.|+|....+.-....... ... .......+.+.+|
T Consensus 102 ~PP~nltv~~----~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~~W~~~~~~~--~~~----~~~~~~~~~~~~L 171 (219)
T 3tgx_A 102 APPFDVTVTF----SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGDPWAVSPRRK--LIS----VDSRSVSLLPLEF 171 (219)
T ss_dssp CCCEEEEEEE----SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTSCTTSCCEEE--EEC----SSCSEEEECTTSS
T ss_pred CCCCceEEEe----CCCEEEEEeCCcCCccccccccCEEEEEEEecCCCCceecccce--eEe----cCCCEEEEEeccC
Confidence 4677777763 25999999987421 124677877653211100111 110 1123455678899
Q ss_pred CCCCEEEEEeCC---------C---CccceEEEECCCC
Q 046207 123 KYDTKYFYQLGS---------G---NATRRFHFTTPPK 148 (458)
Q Consensus 123 ~p~t~Y~Y~v~~---------g---~~~~~~~f~T~p~ 148 (458)
.|++.|..||.. | .+|+...|+|++.
T Consensus 172 ~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 172 RKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp CSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 999999999863 2 2356889999875
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=88.22 E-value=1.6 Score=45.06 Aligned_cols=68 Identities=19% Similarity=0.166 Sum_probs=45.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|....++-... ++++++|..+...+ ...||+...++..|..+. ++ . .. ..++++|.||+.
T Consensus 12 pP~~P~v~~~~~--~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~------~---~t--~~~V~~L~~g~~ 77 (573)
T 3uto_A 12 PPRFPIIENILD--EAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS------R---YT--YTTIEGLRAGKQ 77 (573)
T ss_dssp CCEEEEEEEECS--SCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE------S---SS--EEEECCCCTTCE
T ss_pred cCCCCEEEEeeC--CEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc------c---CC--EEEeCCCCCCCc
Confidence 455555554444 69999999874222 246788887777776653 21 1 11 257899999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.+||..
T Consensus 78 Y~FRV~A 84 (573)
T 3uto_A 78 YEFRIIA 84 (573)
T ss_dssp EEEEEEE
T ss_pred EeEEEEE
Confidence 9999985
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=87.68 E-value=0.23 Score=36.18 Aligned_cols=32 Identities=47% Similarity=0.471 Sum_probs=23.3
Q ss_pred EEEecCCCCCCEEEEEeCC----CCc-cceEEEECCC
Q 046207 116 HATIKRLKYDTKYFYQLGS----GNA-TRRFHFTTPP 147 (458)
Q Consensus 116 ~~~l~gL~p~t~Y~Y~v~~----g~~-~~~~~f~T~p 147 (458)
.-+|.||+||.+|.-++.+ |.+ ...+.|+|..
T Consensus 39 SYtIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT~~ 75 (89)
T 1q38_A 39 SYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 75 (89)
T ss_dssp CCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEECSSS
T ss_pred eEEEeccCCCcEEEEEEEeeeecccCCceEEEEEecc
Confidence 3479999999999988765 332 3467777754
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=87.50 E-value=3.5 Score=40.31 Aligned_cols=77 Identities=19% Similarity=0.363 Sum_probs=46.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-----------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-----------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKR 121 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 121 (458)
+|. |.+.... +++.|+|. +.... .-.|.|+...........+ -...++|++
T Consensus 108 pP~-v~~~~~~---~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~-------------~~~~~~i~~ 169 (414)
T 3se4_A 108 PPE-VHLEAED---KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYK 169 (414)
T ss_dssp CCE-EEEEECS---SCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEEE-------------ECSEEEECC
T ss_pred CCe-EEEEEcC---CEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEec-------------CCcEEEEcC
Confidence 453 7766443 48999999 64221 2356777765443222111 112468999
Q ss_pred CCCCCEEEEEeCC--------CCccceEEEECCC
Q 046207 122 LKYDTKYFYQLGS--------GNATRRFHFTTPP 147 (458)
Q Consensus 122 L~p~t~Y~Y~v~~--------g~~~~~~~f~T~p 147 (458)
|.|+|.|..+|.. |..|+...++|..
T Consensus 170 L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 170 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp CCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred CCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 9999999999864 2234455677754
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.21 E-value=0.35 Score=49.79 Aligned_cols=89 Identities=13% Similarity=0.184 Sum_probs=52.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+...+...+++.|+|..+..... -.|+|....+..+..+.. .........+.+++|+|+|.
T Consensus 200 ~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~--------~~~~~~~~~~~i~~L~p~t~ 271 (589)
T 3l5h_A 200 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP--------EDTASTRSSFTVQDLKPFTE 271 (589)
T ss_dssp CCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCT--------TSSCSCCSEEEECSCCSSCC
T ss_pred CCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEcc--------ccCcCceeEEEECCCCCCCE
Confidence 477778776444445799999987642222 356776654332221100 00011234567999999999
Q ss_pred EEEEeCC----C--Cc---cceEEEECCCC
Q 046207 128 YFYQLGS----G--NA---TRRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~----g--~~---~~~~~f~T~p~ 148 (458)
|.+||.. | .. +....++|.+.
T Consensus 272 Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 272 YVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 9999875 2 22 34556777653
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=86.94 E-value=5.9 Score=37.67 Aligned_cols=83 Identities=23% Similarity=0.230 Sum_probs=49.3
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+.... .+++.|+|..+... +.. .|+|.......+.... .........|.+|+|++.
T Consensus 198 ~P~~~~~~~~~--~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~~ 264 (389)
T 2jll_A 198 SPYGVKIIELS--QTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNTT 264 (389)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTCE
T ss_pred CCcceEEeecc--CCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCCE
Confidence 56556555443 36899999865322 222 4566665443332111 011223567899999999
Q ss_pred EEEEeCC----C--CccceEEEECCCC
Q 046207 128 YFYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
|.|+|.. | ..+....++|.+.
T Consensus 265 y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 265 YEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEcCCccCCCCcceEEEecCC
Confidence 9999865 3 3344667888653
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.82 E-value=1.3 Score=44.13 Aligned_cols=79 Identities=9% Similarity=0.145 Sum_probs=48.0
Q ss_pred CCeEEEEEecCCCCCCc--HHHHHHHH----hCCCCcEEEEcCccccCCC-------CC---C--CchhHHHH-HHHHHH
Q 046207 153 VPYIFGIIGDLGQTYDS--NQTFEHYV----SNPKGQAVLFVGDLSYADD-------HP---Q--HDNRRWDS-WGRFVE 213 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~--~~~l~~~~----~~~~pd~vl~~GDl~y~~~-------~~---~--~~~~~~~~-~~~~~~ 213 (458)
.++++++.+......++ ..-+..++ ++.+||.+|++|.+++... .+ . .+...++. |.+.+.
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 67999999998665432 23333333 3237999999999998752 10 0 01222333 333333
Q ss_pred HH----hhccceEEccCCcccC
Q 046207 214 KS----TAYQAWIWVPGNHELD 231 (458)
Q Consensus 214 ~l----~~~~P~~~v~GNHD~~ 231 (458)
++ ...+-++.+||+||..
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHhccCCCEEEEeCCccccc
Confidence 33 3456689999999974
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=86.69 E-value=2.3 Score=43.41 Aligned_cols=93 Identities=14% Similarity=0.144 Sum_probs=49.2
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC-----CCeEEEEecCCCCc-eEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY-----PNVVTHWEANSKRK-HKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..+.... . .++++|+|..+...+ .-.|+|........ ...-+....+.. .........++|++|+|+
T Consensus 335 saP~nl~~~v--s-~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~-~~~~~~~ts~tI~gL~P~ 410 (536)
T 3fl7_A 335 SAPHYLTAVG--M-GAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSE-PPHGLTRTSVTVSDLEPH 410 (536)
T ss_dssp CCBSCEEEEC--C-TTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESS-CSSSBCSSEEEEECCCTT
T ss_pred CcccceEEEe--c-CCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEE-eecCCccceeEeCCCCCC
Confidence 4677774432 2 379999998765322 22566665321100 000000011110 001112346789999999
Q ss_pred CEEEEEeCC----CC-----ccceEEEECCCC
Q 046207 126 TKYFYQLGS----GN-----ATRRFHFTTPPK 148 (458)
Q Consensus 126 t~Y~Y~v~~----g~-----~~~~~~f~T~p~ 148 (458)
|.|.+||.. |. .+....++|.+.
T Consensus 411 T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~ 442 (536)
T 3fl7_A 411 MNYTFTVEARNGVSGLVTSRSFRTASVSINQT 442 (536)
T ss_dssp CEEEEEEEEECTTGGGCSCCCEEEEEEECCSC
T ss_pred CEEEEEEEEEecCCCCCCCCccceeEEeeccc
Confidence 999999864 32 234567788664
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.53 E-value=2.6 Score=37.45 Aligned_cols=79 Identities=20% Similarity=0.259 Sum_probs=49.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-----C------------CCeEEEEecCCCCceEEEEEEEEEEecccccceEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-----Y------------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIH 115 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-----~------------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (458)
+|. |.++..+ +++.|.|.-+... + .-.|.|+........ .. .. . .+
T Consensus 111 PP~-v~v~~~~---~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~~--~~---~~------~--~~ 173 (221)
T 4doh_R 111 PPE-VALTTDE---KSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTW--SQ---CV------T--NH 173 (221)
T ss_dssp CCE-EEEECCS---SCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEEE--EE---EE------C--SS
T ss_pred CCE-EEEEECC---CEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcEE--EE---ee------c--Cc
Confidence 565 8887433 5999999966421 1 236677766443211 10 10 1 13
Q ss_pred EEEecCCCCCCEEEEEeCC--------CCccceEEEECCCC
Q 046207 116 HATIKRLKYDTKYFYQLGS--------GNATRRFHFTTPPK 148 (458)
Q Consensus 116 ~~~l~gL~p~t~Y~Y~v~~--------g~~~~~~~f~T~p~ 148 (458)
.+.|.+|+|+|.|..+|.. |..|+...|+|.+.
T Consensus 174 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 174 TLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred EEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 5689999999999999763 34456788888774
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=86.48 E-value=2.2 Score=37.42 Aligned_cols=88 Identities=11% Similarity=0.174 Sum_probs=45.2
Q ss_pred CCCCccEEEEecCCCCCceEEEEEcCCCC-------CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCC
Q 046207 51 FNAPEQVHITQGDHDGRSVIVSWVTPDEK-------YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLK 123 (458)
Q Consensus 51 ~~~p~~v~~~~~~~~~~~~~i~W~t~~~~-------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 123 (458)
..+|..|++..... ....|+|..+... -.-.|+|....+.-... ... . . .........+.+|.
T Consensus 98 p~PP~nl~~~~~~~--~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~-~~~---~---~-~~~~~~~~~~~~L~ 167 (207)
T 1iar_B 98 PRAPGNLTVHTNVS--DTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-IYN---V---T-YLEPSLRIAASTLK 167 (207)
T ss_dssp CCCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-EEE---E---C-SSCCEEEECC----
T ss_pred cCCCCCeEEEEccC--CCEEEEECCCCCccccccccEEEEEEEccCCCchhhe-eee---e---e-cCCcEEEEEHHHCC
Confidence 35787787775332 4899999987421 12367887755432111 110 0 0 12234455677999
Q ss_pred CCCEEEEEeCC------C---CccceEEEECCCC
Q 046207 124 YDTKYFYQLGS------G---NATRRFHFTTPPK 148 (458)
Q Consensus 124 p~t~Y~Y~v~~------g---~~~~~~~f~T~p~ 148 (458)
||+.|..||.. | .+|+...|+|.++
T Consensus 168 p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 168 SGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp -CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 99999999874 4 2456788888764
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.42 E-value=0.91 Score=39.26 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=35.2
Q ss_pred CCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 66 GRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 66 ~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
.+++.|+|..+... ..-.|+|.......... .... .+-...+.|+||+|+|.|.++|..
T Consensus 125 ~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~----~~~v------~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 125 ASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ----YLDL------PSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp SCCEEEECCCSCTTEEEEEEEEEETTTCCCCE----EEEE------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCeEEEEEeCCCCCccEEEEEEEECCCCCcee----EEEc------CCceeEEEeCCCCCCCEEEEEEEE
Confidence 47999999766422 12356676543221111 0111 111245789999999999999875
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=86.33 E-value=2.5 Score=36.73 Aligned_cols=70 Identities=13% Similarity=0.181 Sum_probs=46.5
Q ss_pred CCCCccEEEEecCCCCCceEEEEEcCCCC--CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 51 FNAPEQVHITQGDHDGRSVIVSWVTPDEK--YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 51 ~~~p~~v~~~~~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
..+|..|++....+ ..+.|+|..+... -.-.|+|....+..+...... ......|.+|+|++.|
T Consensus 99 P~pP~~l~~~~~~~--~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~~------------~~~~~~l~~l~p~~~Y 164 (199)
T 2b5i_C 99 PWAPENLTLHKLSE--SQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRY 164 (199)
T ss_dssp CCCCEEEEEEEEET--TEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEEC------------SSCEEEECSCCTTSCE
T ss_pred cCCCcEEEEEECCC--CCEEEEECCCCCCCceEEEEEEeecCCcccEEEecc------------CceEEEecCCCCCcEE
Confidence 35787888887654 5999999987521 134688887655444322110 1134578899999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
..||..
T Consensus 165 ~vqVR~ 170 (199)
T 2b5i_C 165 TFRVRS 170 (199)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999874
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.46 E-value=3.1 Score=43.80 Aligned_cols=79 Identities=13% Similarity=0.197 Sum_probs=45.0
Q ss_pred CC-ccEEEEecCCCCCceEEEEEcCCCC-CC---CeEEEEecCC--------CCceEEEEEEEEEEecccccceEEEEEe
Q 046207 53 AP-EQVHITQGDHDGRSVIVSWVTPDEK-YP---NVVTHWEANS--------KRKHKTHSIIKTYRYFNYSSGYIHHATI 119 (458)
Q Consensus 53 ~p-~~v~~~~~~~~~~~~~i~W~t~~~~-~~---~~v~y~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (458)
+| ..+.+.-. ..+++.|+|..+... .. -.|+|....+ ..+..+.. .....++|
T Consensus 162 ~P~~~l~v~~~--~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~i 227 (680)
T 1zlg_A 162 KPRKELRFTEL--QSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQL 227 (680)
T ss_pred cccccceEEec--cCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEEe
Confidence 56 56666543 347999999976321 11 3566665422 11111111 01224678
Q ss_pred cCCCCCCEEEEEeCC----C---CccceEEEEC
Q 046207 120 KRLKYDTKYFYQLGS----G---NATRRFHFTT 145 (458)
Q Consensus 120 ~gL~p~t~Y~Y~v~~----g---~~~~~~~f~T 145 (458)
++|+|+|.|.|||.. | .++....|+|
T Consensus 228 ~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t 260 (680)
T 1zlg_A 228 TDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRS 260 (680)
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCCCCccceEc
Confidence 999999999999874 4 2333445666
|
| >2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A* | Back alignment and structure |
|---|
Probab=85.35 E-value=0.8 Score=47.66 Aligned_cols=92 Identities=21% Similarity=0.356 Sum_probs=49.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEEEEEE----EE---------eccc-----ccceE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKT----YR---------YFNY-----SSGYI 114 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~----~~---------~~~~-----~~~~~ 114 (458)
+|..|.+.-....++++++.|..++. ......|...-+.. .+ ++... +. +.+- ..-..
T Consensus 37 ~p~~~~~~t~~~~~~si~l~~~~p~~-~~~~~~y~vy~ng~--~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (608)
T 2uvf_A 37 APQQLQVPTLAYDESSIVLVWKAPED-TRKIVDYQIFSAGK--LL-GKASDNNDNFSPAKPYIDHFYVNDKDNFQHKIVM 112 (608)
T ss_dssp CCEEEECCTTCBCSSCEEEEEECCSC-CTTEEEEEEEETTE--EE-EEHHHHHHHHCSSHHHHHHHHHTCGGGCSCCCCC
T ss_pred CCCceEeeecccCCcEEEEEEeCCcc-ccccccEEEEECCE--Ee-Eeeccccccccccccccccccccccccccceeee
Confidence 67777653233334799999998863 44555555532211 01 11000 00 0000 00024
Q ss_pred EEEEecCCCCCCEEEEEeCC----CC---ccceEEEECCCC
Q 046207 115 HHATIKRLKYDTKYFYQLGS----GN---ATRRFHFTTPPK 148 (458)
Q Consensus 115 ~~~~l~gL~p~t~Y~Y~v~~----g~---~~~~~~f~T~p~ 148 (458)
++.++++|+|+|+|.|++.. |. .++.-..+|.+.
T Consensus 113 ~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 113 QNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred eeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 67889999999999999965 42 233455666653
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.33 E-value=0.61 Score=47.08 Aligned_cols=87 Identities=13% Similarity=0.185 Sum_probs=52.9
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..|++.... .+++.|+|..+... -.-.|+|....+..... .+.. .....-.+.+.|.+|+|+|.
T Consensus 383 ~PP~nl~v~~~~--stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv-~~~~~~~~s~~l~~L~PgT~ 453 (483)
T 3e0g_A 383 HTPTSFKVKDIN--STAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTI-QGVENSSYLVALDKLNPYTL 453 (483)
T ss_dssp CCCEEEEECCSS--SSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCC-BCCSSSBCCCCCCSCCSSSS
T ss_pred CCCeeeEEEEec--CCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEE-eccCCceeEEEEeccCCCcE
Confidence 478777776433 36999999987432 24578888765432111 1110 00011234567999999999
Q ss_pred EEEEeCC-----C---CccceEEEECCC
Q 046207 128 YFYQLGS-----G---NATRRFHFTTPP 147 (458)
Q Consensus 128 Y~Y~v~~-----g---~~~~~~~f~T~p 147 (458)
|..||.. | .+|+...|+|+.
T Consensus 454 Y~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 454 YTFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp CEEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 9999875 1 234566777765
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=84.02 E-value=3.9 Score=38.10 Aligned_cols=80 Identities=11% Similarity=0.077 Sum_probs=44.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEE-EEE-EecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSII-KTY-RYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..+++... .+++.|+|..+..... -.|+|....+..+....... ..- ............+.|.+|+|+
T Consensus 201 ~pP~~l~~~~~---~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~ 277 (314)
T 3bpo_C 201 DPPHIKNLSFH---NDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPD 277 (314)
T ss_dssp CCCEEEEEEEE---TTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTT
T ss_pred CCCCEEEEEEc---CCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCC
Confidence 47888888743 2699999998853222 35677765443322111000 000 000000123456789999999
Q ss_pred CEEEEEeCC
Q 046207 126 TKYFYQLGS 134 (458)
Q Consensus 126 t~Y~Y~v~~ 134 (458)
|.|..||..
T Consensus 278 t~Y~~qVra 286 (314)
T 3bpo_C 278 TLNTVRIRV 286 (314)
T ss_dssp SCEEEEEEE
T ss_pred CEEEEEEEe
Confidence 999999863
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.10 E-value=2.5 Score=37.10 Aligned_cols=79 Identities=10% Similarity=0.160 Sum_probs=46.9
Q ss_pred cEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC-
Q 046207 56 QVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS- 134 (458)
Q Consensus 56 ~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~- 134 (458)
.++++.. .+++.|.|..+...-.-.|.|+..+....... ..+. .....++|.+|+|+|.|..+|..
T Consensus 114 ~v~v~~~---~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~----~~~~------~~~~~~~i~~L~p~t~Ycv~Vra~ 180 (206)
T 4doh_B 114 GMEITKD---GFHLVIELEDLGPQFEFLVAYWRREPGAEEHV----KMVR------SGGIPVHLETMEPGAAYCVKAQTF 180 (206)
T ss_dssp CEEEEEE---TTEEEEEECCCCTTCEEEEEEEESSSSCCCEE----EEEC------CSSSEEEEEECCSSSCEEEEEEEE
T ss_pred eEEEEeC---CCEEEEEecCCCCcEEEEEEEEEcCCCceeEE----eEEc------cCCeEEEEeCCCCCCcEEEEEEEE
Confidence 3777632 36999999865333345788887654332111 1111 00124789999999999999864
Q ss_pred -------CCccceEEEECCC
Q 046207 135 -------GNATRRFHFTTPP 147 (458)
Q Consensus 135 -------g~~~~~~~f~T~p 147 (458)
|..|+..-|+|..
T Consensus 181 ~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 181 VKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp EGGGTEECCCCCCEEECC--
T ss_pred ecCCCCCCCCCCCEeEEccc
Confidence 3334456666643
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.37 E-value=6 Score=40.30 Aligned_cols=72 Identities=13% Similarity=0.101 Sum_probs=42.6
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC-CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE-KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.+... .+++.|+|..+.. ...-.|+|........... ..... ...-.....+++|+|++.|.++
T Consensus 403 p~~~l~~~~~---~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~L~p~t~Y~~~ 472 (589)
T 3l5h_A 403 PVMDLKAFPK---DNMLWVEWTTPRESVKKYILEWCVLSDKAPCIT-----DWQQE--DGTVHRTYLRGNLAESKCYLIT 472 (589)
T ss_dssp CCCSCEEEEC---SSSEEEECCCCSSCCSCBCCEEEEECSSSCCCE-----EECCB--CSSCCEEECCSCCCSSSEEEEE
T ss_pred CcceEEEEEC---CCeEEEEEECCCCCccEEEEEEEECCCCCCCcc-----CcEEe--eCCcceEEehhccccCcEEEEE
Confidence 4456666644 2699999987642 3345777877654321100 00000 1112334567999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 473 V~A 475 (589)
T 3l5h_A 473 VTP 475 (589)
T ss_dssp ECB
T ss_pred EEE
Confidence 985
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=82.29 E-value=4.5 Score=36.63 Aligned_cols=83 Identities=12% Similarity=0.175 Sum_probs=51.4
Q ss_pred CCCCccEEEEecCCCCCceEEEEEcCCCCC--CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 51 FNAPEQVHITQGDHDGRSVIVSWVTPDEKY--PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 51 ~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
..+|..|++....+ ..+.|+|..+.... .-.|+|....+..+...... ......|.+|+|++.|
T Consensus 137 P~PP~nl~v~~~~~--~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~~------------~~~~~~l~~L~p~~~Y 202 (247)
T 2erj_C 137 PWAPENLTLHKLSE--SQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRY 202 (247)
T ss_dssp CCCCEEEEEEESSS--SCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEEC------------SSCEEEESCCCTTSCE
T ss_pred eCCCCeEEEEECCC--CcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEecC------------CceEEEecCCCCCCEE
Confidence 34787888876544 59999999875211 13578877655444332110 1124567899999999
Q ss_pred EEEeCC---------C---CccceEEEECCC
Q 046207 129 FYQLGS---------G---NATRRFHFTTPP 147 (458)
Q Consensus 129 ~Y~v~~---------g---~~~~~~~f~T~p 147 (458)
..||.. | .+|+...|.|.+
T Consensus 203 ~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~ 233 (247)
T 2erj_C 203 TFRVRSRFNPLCGSAQHWSEWSHPIHWGSNT 233 (247)
T ss_dssp EEEEEEEECSSSCCCCCCCCCCCCEEECC--
T ss_pred EEEEEEEeCCCCCCCCccCCCCcCEEEECCC
Confidence 999874 2 234556677754
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=81.19 E-value=12 Score=36.52 Aligned_cols=99 Identities=11% Similarity=0.109 Sum_probs=55.7
Q ss_pred CCCCccEEEEecCCCCCceEEEEEcCCCCC----------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEec
Q 046207 51 FNAPEQVHITQGDHDGRSVIVSWVTPDEKY----------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIK 120 (458)
Q Consensus 51 ~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (458)
..+|..|.+...+ +.+.|+|..+.... .-.|+|+... ..+..+... . .....+...+.
T Consensus 109 p~pP~~l~v~~~~---~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~----~----~~~~~~~~~~~ 176 (419)
T 2gys_A 109 PPEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL----L----SNTSQATLGPE 176 (419)
T ss_dssp CCCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE----E----ESSSEEEECTT
T ss_pred CCCCCceEEEecC---CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee----c----ccceEEEechh
Confidence 3468888887654 49999999875321 1356676654 222111100 0 01122333344
Q ss_pred CCCCCCEEEEEeCC---------CC---ccceEEEECCCCCCCCCCeEEEEEec
Q 046207 121 RLKYDTKYFYQLGS---------GN---ATRRFHFTTPPKVGPDVPYIFGIIGD 162 (458)
Q Consensus 121 gL~p~t~Y~Y~v~~---------g~---~~~~~~f~T~p~~~~~~~~~f~~~gD 162 (458)
+|.|++.|..||.. |. +|+...|+|++.. ...+..+-...+
T Consensus 177 ~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~ 229 (419)
T 2gys_A 177 HLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFFD 229 (419)
T ss_dssp TCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEEC
T ss_pred hcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEEC
Confidence 99999999999874 22 2456788887754 234444444433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 458 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 1e-104 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 2e-38 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 9e-36 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 1e-13 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 2e-05 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 2e-04 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 2e-04 | |
| d1uena_ | 125 | b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens | 0.001 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 309 bits (793), Expect = e-104
Identities = 212/310 (68%), Positives = 253/310 (81%), Gaps = 1/310 (0%)
Query: 148 KVGPDVPYIFGIIGDLGQTYDSNQTFEHY-VSNPKGQAVLFVGDLSYADDHPQHDNRRWD 206
+ G DVPY FG+IGDLGQ++DSN T HY +S KGQ VLFVGDLSYAD +P HDN RWD
Sbjct: 1 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWD 60
Query: 207 SWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSI 266
+WGRF E+S AYQ WIW GNHE+++APEI E PFKP+++RYHVPY ASQSTSP WYSI
Sbjct: 61 TWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSI 120
Query: 267 KRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEG 326
KRASA+IIVLSSYSAYG+ TPQY WL+KEL KV R+ETPWLIVL+HSP YNS ++H+MEG
Sbjct: 121 KRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEG 180
Query: 327 ESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIG 386
E+MR FE+WFV++KVD+V AGHVH+YER+ R SN+ Y ITNG+ TPVKD SAPVY+TIG
Sbjct: 181 EAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIG 240
Query: 387 DGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWL 446
D GN + +PQP YSA+REASFGH M +IKNRTHAHF+W+RN D AV ADS W
Sbjct: 241 DAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWF 300
Query: 447 FNRYWYPEEE 456
FNR+WYP ++
Sbjct: 301 FNRHWYPVDD 310
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 133 bits (335), Expect = 2e-38
Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
Query: 39 DMPL--AAFPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHK 96
DMPL F PPG+NAP+QVHITQGD GR++I+SWVT DE + V +W + RK
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 97 THSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPP 147
+ TYR+FNYSSG+IHH TI++LKY+TKY+Y++G N TRRF F TPP
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 126 bits (317), Expect = 9e-36
Identities = 62/114 (54%), Positives = 82/114 (71%), Gaps = 3/114 (2%)
Query: 37 SVDMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTP-DEKYPNVVTHWEANSKR 93
VDMP + F P G+NAP+QVHITQGD++GR VI+SW TP D+ N V +W NSK
Sbjct: 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKS 65
Query: 94 KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPP 147
+ + + TY+Y+NY+S +IHH TIK L+YDTKY+Y+LG G+A R+F F TPP
Sbjct: 66 QKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 69.4 bits (168), Expect = 1e-13
Identities = 38/306 (12%), Positives = 88/306 (28%), Gaps = 45/306 (14%)
Query: 151 PDVPYIFGIIGDLGQTYDSN----------QTFEHYVSNPKGQAVLFVGDLSYADDHPQH 200
P F +GD G ++ + V +L +GD Y
Sbjct: 1 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 60
Query: 201 DNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTS 260
++R+ V + + W D+ + + + + R++ P +
Sbjct: 61 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRF 120
Query: 261 PLWYSIKRASAYIIVLSSYSAYGKYTP---------------QYAWLEKELPKVNRAETP 305
+ S + +++ + Q AW++K+L A+
Sbjct: 121 KIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQL---AAAKED 177
Query: 306 WLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYN 365
+++V H P ++ + + HKV + GH H+ + + + +
Sbjct: 178 YVLVAGHYPVWSIAEHGPTHC--LVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFV 235
Query: 366 ITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTH 425
++ + + G + + G A +EI
Sbjct: 236 LSGAGNFMDPSKKHLRKVPNG--------------YLRFHFGAENSLGGFAYVEI-TPKE 280
Query: 426 AHFTWH 431
T+
Sbjct: 281 MSVTYI 286
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 44.0 bits (102), Expect = 2e-05
Identities = 25/243 (10%), Positives = 60/243 (24%), Gaps = 20/243 (8%)
Query: 152 DVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRF 211
V + +++ + DL DD ++ ++
Sbjct: 85 SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDL-IGDDIYAYEFSPAPNFRFV 143
Query: 212 VEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASA 271
+ + + + ++ +++ + +R
Sbjct: 144 LLDAYDLSVIGREEESEKHTHSWR---------ILTQHNHNLQDLNLPPVSVGLEQRFVK 194
Query: 272 YIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRV 331
+ S Q WL+ L + + ++ H P + + +
Sbjct: 195 FNGGFSEQ--------QLQWLDAVLTLSDHKQERV-LIFSHLPVHPCAADPICLAWNHEA 245
Query: 332 AFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTI-GDGGN 390
V +AGH H R S Q+ G+ A + D
Sbjct: 246 VLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETPPHSHAFATAYLYEDRMV 305
Query: 391 IEG 393
++G
Sbjct: 306 MKG 308
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 40.5 bits (93), Expect = 2e-04
Identities = 18/168 (10%), Positives = 36/168 (21%), Gaps = 12/168 (7%)
Query: 184 AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFK 243
A+ +G+L + D F S A+ +VPG + + E +
Sbjct: 35 AIALIGNLM------PKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLREAANVE 88
Query: 244 PYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAE 303
+ + P W+ + K
Sbjct: 89 LVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPA--WVAEYRLKALWEL 146
Query: 304 TPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVH 351
+ + L + + H LV+
Sbjct: 147 KDYPKIFLFHTMPYHKGLNEQGSHEVA----HLIKTHNPLLVLVAGKG 190
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 40.5 bits (93), Expect = 2e-04
Identities = 17/216 (7%), Positives = 49/216 (22%), Gaps = 26/216 (12%)
Query: 159 IIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK---- 214
I + + +D + ++ + ++ VG++ + + R + K
Sbjct: 7 AIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHE 66
Query: 215 ----------------STAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS-Q 257
VPG ++ + + V +
Sbjct: 67 NEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAG 126
Query: 258 STSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYN 317
++ K + ++ L+ + ++P
Sbjct: 127 WRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPR---RLVTIFYTPPIG 183
Query: 318 SNSYHYMEGESMRV--AFESWFVQHKVDLVVAGHVH 351
E + ++ + GHV
Sbjct: 184 EFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 219
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.4 bits (83), Expect = 0.001
Identities = 18/108 (16%), Positives = 28/108 (25%), Gaps = 11/108 (10%)
Query: 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPN---VVTHWEANSKRKHKTHSIIKTYRYFNY 109
AP V + + V W K + + +
Sbjct: 17 APGNVRVN--VVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILT 74
Query: 110 SSGYIHHATIKRLKYDTKYFYQL------GSGNATRRFHFTTPPKVGP 151
G H + L+ + Y + G G A+ F TP GP
Sbjct: 75 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP 122
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 458 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.93 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.91 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.91 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.89 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.85 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.69 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.68 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.45 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.42 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.17 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.13 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.12 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.01 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.75 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.7 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.68 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.21 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.95 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.51 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.5 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.46 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.42 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.39 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.38 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.36 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.27 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.25 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.25 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.25 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.24 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.21 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.17 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.15 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.15 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 97.12 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.02 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 97.01 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 96.99 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.98 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.98 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.96 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.95 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.95 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.94 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.92 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.88 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.86 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.86 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.83 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.8 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.79 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.75 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.74 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.74 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.73 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.69 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.69 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.67 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.64 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.63 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 96.62 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 96.61 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.6 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.56 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.56 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.55 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.54 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.54 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.53 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.52 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.49 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.49 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 96.48 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.44 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.37 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 96.36 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.36 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.31 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.23 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.22 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.2 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.14 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 96.06 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 96.06 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 96.06 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.03 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.01 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 95.93 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.82 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.79 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 95.74 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.59 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.45 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.35 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 94.99 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 94.99 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 94.38 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.16 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 93.97 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 93.84 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 93.69 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 93.28 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 93.02 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 91.77 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 91.13 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 91.02 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 90.87 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 90.64 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 90.33 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 88.76 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 81.19 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=9.6e-62 Score=470.49 Aligned_cols=307 Identities=69% Similarity=1.235 Sum_probs=269.4
Q ss_pred CCCCCeEEEEEecCCCCCCcHHHHHHHH-hCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCc
Q 046207 150 GPDVPYIFGIIGDLGQTYDSNQTFEHYV-SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 150 ~~~~~~~f~~~gD~~~~~~~~~~l~~~~-~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 228 (458)
|++.|+||+++||+|.......++.++. ...+|||||++||++|.++.......+|+.|.+.++++...+|+++++|||
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~GNH 82 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNH 82 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCGG
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEecccc
Confidence 3567999999999988766666776643 334899999999999987755556789999999999998899999999999
Q ss_pred ccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEE
Q 046207 229 ELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLI 308 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~I 308 (458)
|+......+....+..|..+|.+|..+.....+.||+|++|+++||+||++..+....+|++||+++|+++++++++|+|
T Consensus 83 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~i 162 (312)
T d2qfra2 83 EIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLI 162 (312)
T ss_dssp GTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCCEEE
T ss_pred cccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCCEEE
Confidence 98655444445667788889999988777677889999999999999999988888899999999999998888899999
Q ss_pred EEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCC
Q 046207 309 VLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDG 388 (458)
Q Consensus 309 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~g 388 (458)
|++|+|+|++...+..+.+.+|+.|++||.+++||+||+||+|.|||++|+++++....++.+.++.+++|++|||+|+|
T Consensus 163 v~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~g 242 (312)
T d2qfra2 163 VLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDA 242 (312)
T ss_dssp EECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCS
T ss_pred EEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECcC
Confidence 99999999887666566788999999999999999999999999999999999887777788888888999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEeeecCCCCC
Q 046207 389 GNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPEEE 456 (458)
Q Consensus 389 G~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~~~~~~ 456 (458)
|+.++....+.+++|.|+++++.+|||++|+|.|+|+|.|+|+++.||++++.|+|||.|+++.|-.+
T Consensus 243 G~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~~~~~~~~ 310 (312)
T d2qfra2 243 GNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDD 310 (312)
T ss_dssp CTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEEEEECTTTCCCCC
T ss_pred CCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeCCCCCCCC
Confidence 98877666777888999999999999999999999999999999999997777999999999888654
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=8.1e-35 Score=279.02 Aligned_cols=259 Identities=18% Similarity=0.273 Sum_probs=180.5
Q ss_pred CeEEEEEecCCCCCCc----------HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHH-H-HHhhccce
Q 046207 154 PYIFGIIGDLGQTYDS----------NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFV-E-KSTAYQAW 221 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~----------~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~-~-~l~~~~P~ 221 (458)
.+||+++||+|..... ...+.+.+++.+|||||++||++|.++.....+.+|..+.+.+ . .....+|+
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P~ 83 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPW 83 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCE
T ss_pred CeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCce
Confidence 6999999999865432 1122333333499999999999998776555566676543322 2 23457999
Q ss_pred EEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEc------CeEEEEEecCCCc------C-------
Q 046207 222 IWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKR------ASAYIIVLSSYSA------Y------- 282 (458)
Q Consensus 222 ~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~------g~~~fi~Lds~~~------~------- 282 (458)
++++||||+..... ....+..+..++.+| ..||++.+ ++++|+++|+... +
T Consensus 84 ~~~~GNHD~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~ 153 (302)
T d1utea_ 84 HVLAGNHDHLGNVS--AQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPER 153 (302)
T ss_dssp EECCCHHHHHSCHH--HHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCS
T ss_pred EEeecccccccccc--cccchhhccccccCC--------CcccceeecccCCCCcEEEEEccceeEeecccccccccccc
Confidence 99999999753211 011223334444444 23566543 4799999998521 0
Q ss_pred ----CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccc
Q 046207 283 ----GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNR 358 (458)
Q Consensus 283 ----~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~ 358 (458)
....+|++||+++|++ .+.+|+||++|||+++.... ......++.|.++|++++|++|||||+|.|+|+.
T Consensus 154 ~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~- 227 (302)
T d1utea_ 154 PRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ- 227 (302)
T ss_dssp CSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEE-
T ss_pred cccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCCCcceEEEe-
Confidence 0136899999999998 56789999999999976543 3356788999999999999999999999999974
Q ss_pred cccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCC---CCCc-ceeeCceeEEEEEEecCceEEEEEEEcC
Q 046207 359 FSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQ---PSYS-AYREASFGHAMLEIKNRTHAHFTWHRNH 434 (458)
Q Consensus 359 ~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~---p~~s-~~~~~~~Gf~~l~v~~~~~~~~~~~~~~ 434 (458)
+.+++.||++|+||............. +.+. ......+||++++|. .+.++++|+. .
T Consensus 228 -----------------~~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v~-~~~l~~~~~~-~ 288 (302)
T d1utea_ 228 -----------------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEIT-PKEMSVTYIE-A 288 (302)
T ss_dssp -----------------CTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEEC-SSCEEEEEEE-T
T ss_pred -----------------cCCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEEE-CCEEEEEEEe-C
Confidence 356789999999987654322111111 1111 122357899999994 5678999885 6
Q ss_pred CCceeeeeEEEEEee
Q 046207 435 DNEAVVADSQWLFNR 449 (458)
Q Consensus 435 dg~~~~~D~~~i~~~ 449 (458)
+|+ ++|+++|.+|
T Consensus 289 ~G~--~~~~~~~~~~ 301 (302)
T d1utea_ 289 SGK--SLFKTKLPRR 301 (302)
T ss_dssp TSC--EEEEEEECCC
T ss_pred CCC--EEEEEEecCC
Confidence 899 7899999876
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.93 E-value=5.4e-26 Score=183.47 Aligned_cols=109 Identities=58% Similarity=1.062 Sum_probs=99.4
Q ss_pred CCCCcC--CCCCCCCCCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEE
Q 046207 39 DMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHH 116 (458)
Q Consensus 39 ~~~~~~--~~~~~~~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (458)
|+|+++ |.+|+..++|+||||+++++++++|+|+|.|.+.+..+.|+||.+++.+...+.++..+|+..++..+|+|+
T Consensus 2 ~~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~ 81 (112)
T d2qfra1 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81 (112)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEE
T ss_pred CCCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEE
Confidence 678887 789999999999999999998899999999987788899999999998899999988887766777889999
Q ss_pred EEecCCCCCCEEEEEeCCCCccceEEEECCC
Q 046207 117 ATIKRLKYDTKYFYQLGSGNATRRFHFTTPP 147 (458)
Q Consensus 117 ~~l~gL~p~t~Y~Y~v~~g~~~~~~~f~T~p 147 (458)
|+|+||+|+|+|+|||+++.+|++++|+|+|
T Consensus 82 v~Lt~L~P~T~Y~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EEECSCCTTCEEEEEECCSSSCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCCCceeeEEEEcCC
Confidence 9999999999999999996667899999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.91 E-value=2.1e-24 Score=176.02 Aligned_cols=110 Identities=55% Similarity=1.033 Sum_probs=98.0
Q ss_pred CCCCCcC--CCCCCCCCCCccEEEEecCCCCCceEEEEEcCC-CCCCCeEEEEecCCCCceEEEEEEEEEEecccccceE
Q 046207 38 VDMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPD-EKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYI 114 (458)
Q Consensus 38 ~~~~~~~--~~~~~~~~~p~~v~~~~~~~~~~~~~i~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (458)
.|+|+.+ +..|...++|+||||+++++++++|+|+|+|.. ..+.+.|+||..++.+...+.|+..+|+..++..+|+
T Consensus 7 ~~~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~ 86 (119)
T d1xzwa1 7 VDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFI 86 (119)
T ss_dssp HBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEE
T ss_pred cccCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCeE
Confidence 3788887 788888899999999999998899999999964 3456799999999999999999988887767778899
Q ss_pred EEEEecCCCCCCEEEEEeCCCCccceEEEECCC
Q 046207 115 HHATIKRLKYDTKYFYQLGSGNATRRFHFTTPP 147 (458)
Q Consensus 115 ~~~~l~gL~p~t~Y~Y~v~~g~~~~~~~f~T~p 147 (458)
|+|+|+||+|+|+|+|||+++.++++++|||+|
T Consensus 87 H~v~LtgL~P~T~Y~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 87 HHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEEEECCCCTTCEEEEEECCGGGCEEEEEECCC
T ss_pred EEEEECCCCCCCEEEEEECCCCccceEEEeCCC
Confidence 999999999999999999996667899999997
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.91 E-value=1.2e-23 Score=196.56 Aligned_cols=225 Identities=19% Similarity=0.194 Sum_probs=139.1
Q ss_pred CeEEEEEecCCCCCC---------cHH----HHHHHHh-CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--
Q 046207 154 PYIFGIIGDLGQTYD---------SNQ----TFEHYVS-NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-- 217 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~---------~~~----~l~~~~~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-- 217 (458)
.+||++++|+|.... ..+ +++.+.+ ..+||+||++||+++.+. ...++.+.+.+.++..
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~-----~~~~~~~~~~l~~~~~~~ 78 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-----PAAYRKLRGLVEPFAAQL 78 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCC-----HHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-----hhHHHHHHHHhhhhhhhc
Confidence 699999999997432 122 3344443 248999999999998764 5567777776665543
Q ss_pred ccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC----CCChHHHHHHH
Q 046207 218 YQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY----GKYTPQYAWLE 293 (458)
Q Consensus 218 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~----~~~~~Q~~WL~ 293 (458)
.+|++.++||||.. ..+..+ +... ........|.+..++++|++|||.... ....+|++||+
T Consensus 79 ~~p~~~v~GNHD~~--------~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl~ 144 (256)
T d2hy1a1 79 GAELVWVMGNHDDR--------AELRKF---LLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLA 144 (256)
T ss_dssp TCEEEECCCTTSCH--------HHHHHH---TTCC---CCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHHH
T ss_pred CCCEEEEcccccch--------hhhhhh---hccc---cccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHHH
Confidence 58999999999941 111111 1100 111234578889999999999997542 23478999999
Q ss_pred HHhccccCCCCCeEEEEeccccccCCCCCC-ccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCccc
Q 046207 294 KELPKVNRAETPWLIVLLHSPWYNSNSYHY-MEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGIST 372 (458)
Q Consensus 294 ~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~ 372 (458)
+.|++. +.+.+||++|||++....... .......+.+.+++++++|+++||||+|......
T Consensus 145 ~~L~~~---~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~--------------- 206 (256)
T d2hy1a1 145 EELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------------- 206 (256)
T ss_dssp HHHTSC---CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEE---------------
T ss_pred HHHHhh---hccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhceE---------------
Confidence 999883 445688999999976532110 0111235678889999999999999999654421
Q ss_pred ccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCc
Q 046207 373 PVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424 (458)
Q Consensus 373 ~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~ 424 (458)
-+|+.|+++|+..-... .. ..+.-........||..++|..++
T Consensus 207 ----~~gi~~~~~~s~~~~~~--~~---~~~~~~~~~~~~~g~~lv~v~~d~ 249 (256)
T d2hy1a1 207 ----FVGIPVSVASATCYTQD--LT---VAAGGTRGRDGAQGCNLVHVYPDT 249 (256)
T ss_dssp ----ETTEEEEECCCCC------------------------CEEEEEECSSC
T ss_pred ----ECCEEEEEcCCcccccc--cc---CCCCCcccccCCCCEEEEEEECCC
Confidence 24566777655332110 00 111111223446789999986554
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.89 E-value=3.2e-22 Score=188.41 Aligned_cols=182 Identities=14% Similarity=0.176 Sum_probs=121.5
Q ss_pred eEEEEEecCCCCCC---------c----HHHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 155 YIFGIIGDLGQTYD---------S----NQTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 155 ~~f~~~gD~~~~~~---------~----~~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
++|++++|+|.... . .++++++.+. .+||+||++||+++.+. ...|+.+.+.++.+ .+|
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~-----~~~y~~~~~~l~~l--~~p 73 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-----PEEYQVARQILGSL--NYP 73 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-----HHHHHHHHHHHTTC--SSC
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCc-----chhHHHHHHHHhcc--CCC
Confidence 58999999997432 1 2234444432 38999999999998654 55666666666654 589
Q ss_pred eEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC----CCChHHHHHHHHHh
Q 046207 221 WIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY----GKYTPQYAWLEKEL 296 (458)
Q Consensus 221 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~----~~~~~Q~~WL~~~L 296 (458)
+++++||||.. ..+..+...+ .+... .......|.++.++++||+||+.... ....+|++||+++|
T Consensus 74 ~~~i~GNHD~~--------~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~L 143 (271)
T d3d03a1 74 LYLIPGNHDDK--------ALFLEYLQPL-CPQLG-SDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQL 143 (271)
T ss_dssp EEEECCTTSCH--------HHHHHHHGGG-SGGGC-SCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHH
T ss_pred EEEEecCccch--------HHHHHHhhhh-hhccc-cccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHHH
Confidence 99999999952 1111111111 11000 11124567888889999999997542 23589999999999
Q ss_pred ccccCCCCCeEEEEeccccccCCCCCCc-cchHHHHHHHHHHHHc-CccEEEeccccccccc
Q 046207 297 PKVNRAETPWLIVLLHSPWYNSNSYHYM-EGESMRVAFESWFVQH-KVDLVVAGHVHSYERT 356 (458)
Q Consensus 297 ~~~~~~~~~~~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~ 356 (458)
++. +.+++||++|||++........ ......++|.++++++ +|+++||||.|.....
T Consensus 144 ~~~---~~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (271)
T d3d03a1 144 FEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (271)
T ss_dssp HHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred hhh---ccceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhce
Confidence 984 3345788899998765432211 1122356888999998 6999999999976554
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.85 E-value=5e-21 Score=182.03 Aligned_cols=236 Identities=17% Similarity=0.119 Sum_probs=140.3
Q ss_pred eEEEEEecCCCCCC----------------cHH----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHH
Q 046207 155 YIFGIIGDLGQTYD----------------SNQ----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK 214 (458)
Q Consensus 155 ~~f~~~gD~~~~~~----------------~~~----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 214 (458)
|||++++|+|.+.. +.. +++.+.+. +|||||++||+++..... .......+.+..+.
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~-~~DfVv~~GDl~~~~~~~--~~~~~~~~~~~~~~ 80 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRE-RVQCVVQLGDIIDGHNRR--RDASDRALDTVMAE 80 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBCTHHHH--TTCHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhC-CCCEEEECCCCCCCCCcc--hhHHHHHHHHHHHH
Confidence 99999999997521 112 23344444 999999999999754210 01112223333333
Q ss_pred Hhh-ccceEEccCCcccCCCCCCCCcccCcccceee--ccccCCCCCCCCceEEEEcCeEEEEEecCCCcC---------
Q 046207 215 STA-YQAWIWVPGNHELDYAPEIGENVPFKPYTHRY--HVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY--------- 282 (458)
Q Consensus 215 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f--~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~--------- 282 (458)
+.. .+|+++++||||+.................++ ..............+....++++|+.+|+....
T Consensus 81 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (320)
T d2nxfa1 81 LDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESE 160 (320)
T ss_dssp HHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSH
T ss_pred HHHcCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCccccccccccccc
Confidence 332 68999999999974211000000000000000 000000111123456677889999999874210
Q ss_pred -------------------------------------CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCcc
Q 046207 283 -------------------------------------GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYME 325 (458)
Q Consensus 283 -------------------------------------~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~ 325 (458)
....+|++||+++|+++++ ..+++|+++|+|++....... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~~~~~~~~~-~ 238 (320)
T d2nxfa1 161 KHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPVHPCAADPI-C 238 (320)
T ss_dssp HHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCCCTTSSCGG-G
T ss_pred ccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCCccCCCCCc-c
Confidence 0147899999999988643 345789999999976544321 1
Q ss_pred chHHHHHHHHHHHHc-CccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCC
Q 046207 326 GESMRVAFESWFVQH-KVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPS 404 (458)
Q Consensus 326 ~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~ 404 (458)
.....+++.++|.++ +|+++|+||+|..++.. ..+|+.||+.|+.....
T Consensus 239 ~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~------------------~~~g~~~i~~~~~~~~~------------ 288 (320)
T d2nxfa1 239 LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT------------------DSSGAQHITLEGVIETP------------ 288 (320)
T ss_dssp SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE------------------CTTSCEEEECCCGGGCC------------
T ss_pred chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee------------------ccCCCEEEECCeeecCC------------
Confidence 222356788899998 59999999999876542 35678888876532210
Q ss_pred CcceeeCceeEEEEEEecCceEEEEEE
Q 046207 405 YSAYREASFGHAMLEIKNRTHAHFTWH 431 (458)
Q Consensus 405 ~s~~~~~~~Gf~~l~v~~~~~~~~~~~ 431 (458)
....+|..++|.. ..+.++-+
T Consensus 289 -----~~~~~~~~~~v~~-d~~~~~~~ 309 (320)
T d2nxfa1 289 -----PHSHAFATAYLYE-DRMVMKGR 309 (320)
T ss_dssp -----TTSCEEEEEEECS-SEEEEEEE
T ss_pred -----CCCCCEEEEEEEC-CEEEEEEe
Confidence 1135899999955 45766644
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.69 E-value=4.3e-17 Score=147.77 Aligned_cols=176 Identities=13% Similarity=0.055 Sum_probs=109.3
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcc
Q 046207 153 VPYIFGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
.+-+|+++||+|.. .++++++++ +.++|+||++||+++.+. ...++..+.+.+..+ .+|+++++||||
T Consensus 4 ~~~~i~~~sd~hg~---~eale~~~~~~~~~~~D~vv~~GDl~~~~~----~~~~~~~~~~~L~~~--~~pv~~i~GNHD 74 (228)
T d1uf3a_ 4 TVRYILATSNPMGD---LEALEKFVKLAPDTGADAIALIGNLMPKAA----KSRDYAAFFRILSEA--HLPTAYVPGPQD 74 (228)
T ss_dssp CCCEEEEEECCTTC---HHHHHHHHTHHHHHTCSEEEEESCSSCTTC----CHHHHHHHHHHHGGG--CSCEEEECCTTS
T ss_pred cccEEEEEeCCCCC---HHHHHHHHHHHhhcCCCEEEECCCCCCCCc----cchHHHHhhhhhccc--cceEEEEecCCC
Confidence 34578899999866 444444432 238999999999998765 344454455544433 689999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC----------CCChHHHHHHHHHhccc
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY----------GKYTPQYAWLEKELPKV 299 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~----------~~~~~Q~~WL~~~L~~~ 299 (458)
...... ....+......+.. ......+.+..+++.++.++..... .....|..|+++.++..
T Consensus 75 ~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 146 (228)
T d1uf3a_ 75 APIWEY-----LREAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL 146 (228)
T ss_dssp CSHHHH-----HHHHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGS
T ss_pred chhhhh-----hhhhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhc
Confidence 521100 00000000000000 0011234566677888887754321 11367899999998873
Q ss_pred cCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccc
Q 046207 300 NRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 300 ~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
...+.|+++|+|++.....+. -.+.+.++++++++++++|||+|..
T Consensus 147 ---~~~~~il~~H~p~~~~~~~~~-----~~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 147 ---KDYPKIFLFHTMPYHKGLNEQ-----GSHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp ---CSCCEEEEESSCBCBTTTBTT-----SBHHHHHHHHHHCCSEEEECCSSCE
T ss_pred ---cCCceEEEEeeeccCcccccc-----ccHHHHHHHHhcCCcEEEEcccccc
Confidence 344579999999976543322 1245677889999999999999964
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.68 E-value=1e-16 Score=147.79 Aligned_cols=185 Identities=11% Similarity=0.100 Sum_probs=106.8
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHH-----------------------HHHH
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWD-----------------------SWGR 210 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~-----------------------~~~~ 210 (458)
+.||+++||+|...+..+.+..++++.+||+||++||+++... ....|. .+..
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~ 77 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEA----LEKEYERAHLARREPNRKVIHENEHYIIETLDK 77 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHH----HHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCC----CCHHHHHHHHhhhhhceeeeccccccchhhHHH
Confidence 5799999999977655555444444449999999999998643 111111 1222
Q ss_pred HHHHHhh-ccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCC------
Q 046207 211 FVEKSTA-YQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYG------ 283 (458)
Q Consensus 211 ~~~~l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~------ 283 (458)
.++.+.. .+|++.++||||..... .....+......+.. ......+.+..+++.|+++++.....
T Consensus 78 ~~~~L~~~~~pv~~i~GNHD~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T d2yvta1 78 FFREIGELGVKTFVVPGKNDAPLKI-----FLRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDF 149 (257)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHHH-----HHHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSSS
T ss_pred HHHHHHhcCCcEEEEeCCCcchhhH-----HHHHhcccccccccc---ccccceeEEecCCeEEEEeccccCCccccchh
Confidence 3344433 68999999999952100 000001000000000 00122334455677887776543211
Q ss_pred ---CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCcc--chHHHHHHHHHHHHcCccEEEecccccc
Q 046207 284 ---KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYME--GESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 284 ---~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~--~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
....+..|++..++. .+....|+++|+|++.+....... .....+.+..++++++++++++||.|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~ 221 (257)
T d2yvta1 150 VLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKG 221 (257)
T ss_dssp SCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCE
T ss_pred hhhhhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCC
Confidence 113344556665555 445668999999997643321111 1122457888999999999999999964
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.45 E-value=9.3e-12 Score=109.67 Aligned_cols=186 Identities=14% Similarity=0.188 Sum_probs=109.4
Q ss_pred EEEEEecCCCCCCc---HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 156 IFGIIGDLGQTYDS---NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 156 ~f~~~gD~~~~~~~---~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
=|+++||+|..... ...+.++.+..++|.|+++||++. . ...+.++.+ ..+++.|.||||...
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~--------~----~~l~~l~~l--~~~v~~V~GN~D~~~ 70 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS--------Q----EYVEMLKNI--TKNVYIVSGDLDSAI 70 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC--------H----HHHHHHHHH--CSCEEECCCTTCCSC
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCC--------H----HHHHHHHhh--CCCEEEEcCCCCcch
Confidence 37899999975332 244556665558999999999974 1 122334443 246889999999532
Q ss_pred CCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEec
Q 046207 233 APEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLH 312 (458)
Q Consensus 233 ~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H 312 (458)
... -..+... +| ....+.++ .++|.+.|
T Consensus 71 ~~~------~~~~~~~--lp---------~~~~~~~~-----------------------------------~~~i~l~H 98 (193)
T d2a22a1 71 FNP------DPESNGV--FP---------EYVVVQIG-----------------------------------EFKIGLMH 98 (193)
T ss_dssp CBC------CGGGTBC--CC---------SEEEEEET-----------------------------------TEEEEEEC
T ss_pred hhh------hHHHHhh--CC---------ccEEEEEC-----------------------------------CEEEEEEe
Confidence 110 0111111 11 11122222 23566666
Q ss_pred cccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCC
Q 046207 313 SPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIE 392 (458)
Q Consensus 313 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~ 392 (458)
...+.... -.+.+..++.+.++|++++||+|...... -+++++|-.|+-|.+.
T Consensus 99 ~~~~~~~~--------~~~~l~~~~~~~~~dvvi~GHTH~~~~~~-------------------~~g~~~iNPGSvg~pr 151 (193)
T d2a22a1 99 GNQVLPWD--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE-------------------KNGKLFLNPGTATGAF 151 (193)
T ss_dssp STTSSSTT--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------ETTEEEEECCCSSCCC
T ss_pred ccCCCCCC--------CHHHHHHHHhhcCCCEEEEcCccCceEEE-------------------ECCEEEEECCCCCcCc
Confidence 54332211 12456677888899999999999854321 3466777778887653
Q ss_pred CCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEe
Q 046207 393 GLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFN 448 (458)
Q Consensus 393 ~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 448 (458)
.. ...++ ...|+.|++.+ ..+++++++-.+|+ +-++...++|
T Consensus 152 ~~--~~~~~----------~~syaild~~~-~~v~v~~y~l~~~~-~~~~~~~~~~ 193 (193)
T d2a22a1 152 SA--LTPDA----------PPSFMLMALQG-NKVVLYVYDLRDGK-TNVAMSEFSK 193 (193)
T ss_dssp CT--TSTTC----------CCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred CC--CCCCC----------CCEEEEEEEEC-CEEEEEEEEecCCe-EEEEEEEEeC
Confidence 21 11111 23799999965 45888878766665 3566666654
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.42 E-value=9.3e-12 Score=108.43 Aligned_cols=179 Identities=15% Similarity=0.149 Sum_probs=110.3
Q ss_pred eEEEEEecCCCCCCc---HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccC
Q 046207 155 YIFGIIGDLGQTYDS---NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 231 (458)
+|++++||+|..... ...+.++.+..++|.|+++||++. . ...+.++.+ ..|++.|.||||..
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~--------~----e~l~~l~~~--~~~v~~V~GN~D~~ 66 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT--------K----ESYDYLKTL--AGDVHIVRGDFDEN 66 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS--------H----HHHHHHHHH--CSEEEECCCTTCCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc--------h----hhHHHHHhh--CCceEEEeCCcCcc
Confidence 589999999976433 234555555547999999999973 1 122334433 35789999999952
Q ss_pred CCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEe
Q 046207 232 YAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLL 311 (458)
Q Consensus 232 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~ 311 (458)
. .+|. .-.+.+ ..++|.+.
T Consensus 67 ~-----------------~~p~---------~~~~~~-----------------------------------~g~~i~~~ 85 (182)
T d1z2wa1 67 L-----------------NYPE---------QKVVTV-----------------------------------GQFKIGLI 85 (182)
T ss_dssp T-----------------TSCS---------EEEEEE-----------------------------------TTEEEEEE
T ss_pred c-----------------ccce---------EEEEEE-----------------------------------cCcEEEEE
Confidence 1 0111 001111 11356777
Q ss_pred ccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCC
Q 046207 312 HSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNI 391 (458)
Q Consensus 312 H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~ 391 (458)
|.+.+.... ..+.+..++++.++|++|+||+|...... .+++++|-.|+.|.+
T Consensus 86 Hg~~~~~~~--------~~~~l~~~~~~~~~divi~GHTH~p~~~~-------------------~~~~~~iNPGSv~~p 138 (182)
T d1z2wa1 86 HGHQVIPWG--------DMASLALLQRQFDVDILISGHTHKFEAFE-------------------HENKFYINPGSATGA 138 (182)
T ss_dssp CSCCCCBTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE-------------------ETTEEEEECCCTTCC
T ss_pred eCCCCCCCC--------CHHHHHHHHhccCCCEEEECCcCcceEEE-------------------ECCEEEEeCCCCCCC
Confidence 766543221 12356667788899999999999754321 246677888888776
Q ss_pred CCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEee
Q 046207 392 EGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNR 449 (458)
Q Consensus 392 ~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~ 449 (458)
... .-.++. ..|+.|++.+ ..+++..++-.++ .+..++++++|.
T Consensus 139 r~~--~~~~~~----------~syaild~~~-~~v~~~~~~l~~~-~v~~~~~~~~~~ 182 (182)
T d1z2wa1 139 YNA--LETNII----------PSFVLMDIQA-STVVTYVYQLIGD-DVKVERIEYKKS 182 (182)
T ss_dssp CCS--SCSCCC----------CEEEEEEEET-TEEEEEEEEEETT-EEEEEEEEEECC
T ss_pred CCC--CCCCCC----------CEEEEEEEeC-CEEEEEEEEecCC-cEEEEEEEEEcC
Confidence 421 111122 3599999965 4577666654444 467888888773
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.17 E-value=8.2e-10 Score=95.06 Aligned_cols=158 Identities=18% Similarity=0.177 Sum_probs=99.8
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHh--CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccC
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYVS--NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~~--~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 231 (458)
..||+++||+|.. ..+++++++ ..++|.|+++||+.+... .. ...++.+|.||||..
T Consensus 3 ~~kI~viSD~Hgn---~~al~~vl~~~~~~~D~iih~GD~~~~~~----~~--------------~~~~~~~V~GN~D~~ 61 (173)
T d3ck2a1 3 KQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELRPD----SP--------------LWEGIRVVKGNMDFY 61 (173)
T ss_dssp CEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSCTT----CG--------------GGTTEEECCCTTCCS
T ss_pred CCEEEEEeccCCC---HHHHHHHHHHhhcCCCEEEECCcccCccc----ch--------------hhcCCeEEecCcccc
Confidence 4799999999954 344444332 127999999999887543 11 114788999999952
Q ss_pred CCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEe
Q 046207 232 YAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLL 311 (458)
Q Consensus 232 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~ 311 (458)
. .+|. ...+.++ ...|.+.
T Consensus 62 ~-----------------~~~~---------~~~~~~~-----------------------------------~~~~~~~ 80 (173)
T d3ck2a1 62 A-----------------GYPE---------RLVTELG-----------------------------------STKIIQT 80 (173)
T ss_dssp T-----------------TCCS---------EEEEEET-----------------------------------TEEEEEE
T ss_pred c-----------------ccce---------EEEEEEC-----------------------------------CEEEEEE
Confidence 1 0110 1111111 2356677
Q ss_pred ccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCC
Q 046207 312 HSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNI 391 (458)
Q Consensus 312 H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~ 391 (458)
|...+..... .+.+..++.+.++|++++||+|...... .+++++|-.|+-|.+
T Consensus 81 Hg~~~~~~~~--------~~~l~~~~~~~~~dvvi~GHTH~p~~~~-------------------~~~~~~iNPGSvg~p 133 (173)
T d3ck2a1 81 HGHLFDINFN--------FQKLDYWAQEEEAAICLYGHLHVPSAWL-------------------EGKILFLNPGSISQP 133 (173)
T ss_dssp CSGGGTTTTC--------SHHHHHHHHHTTCSEEECCSSCCEEEEE-------------------ETTEEEEEECCSSSC
T ss_pred eCcCCCCCCC--------HHHHHHHHHhcCCCEEEeCCcCcceEEE-------------------ECCEEEEECCCCCCC
Confidence 7665543211 1245667778899999999999764422 346788999999876
Q ss_pred CCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCc
Q 046207 392 EGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNE 437 (458)
Q Consensus 392 ~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~ 437 (458)
.. ..+ ...|+.|++.+ ..+.++|+. -|++
T Consensus 134 r~-----~~~----------~~syail~~~~-~~~~v~~~~-~d~~ 162 (173)
T d3ck2a1 134 RG-----TIR----------ECLYARVEIDD-SYFKVDFLT-RDHE 162 (173)
T ss_dssp CT-----TCC----------SCCEEEEEECS-SEEEEEEEC-TTSC
T ss_pred CC-----CCC----------CCEEEEEEEeC-CEEEEEEEE-eCCe
Confidence 42 111 12589999955 458889884 5676
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.13 E-value=1e-10 Score=106.58 Aligned_cols=191 Identities=7% Similarity=-0.030 Sum_probs=95.2
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHHh----CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcc
Q 046207 155 YIFGIIGDLGQTYDS-NQTFEHYVS----NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-~~~l~~~~~----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
++|+++||+|..... .+.++.+.+ ..++|.+|++||+++.+. +. ....+.+..+....++++++||||
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~----~~---~evi~~l~~l~~~~~v~~v~GNHD 73 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFP----YP---KEVIEVIKDLTKKENVKIIRGKYD 73 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS----CH---HHHHHHHHHHHHHSCEEEECCHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCC----Cc---HHHHHHHHHHhhcCCEEEEeccHH
Confidence 589999999954222 222333321 126799999999998764 22 233455555555568999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEE
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIV 309 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv 309 (458)
............ ......+.+. +.... .++ ........++..||++...........-.++
T Consensus 74 ~~~~~~~~~~~~-~~~~~~~~~~----------------~~~~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 134 (251)
T d1nnwa_ 74 QIIAMSDPHATD-PGYIDKLELP----------------GHVKK-ALK-FTWEKLGHEGREYLRDLPIYLVDKIGGNEVF 134 (251)
T ss_dssp HHHHHSCTTCSS-SGGGGGSSCC----------------HHHHH-HHH-HHHHHHHHHHHHHHHTSCSCEEEEETTEEEE
T ss_pred HHHHhccccccc-cchhhhhccc----------------hhHHH-hhH-HHhhhcCHHHHHHHHhcccceEEeeCCCcEE
Confidence 521000000000 0000000000 00000 000 0000012456677766544322112234677
Q ss_pred EeccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCC
Q 046207 310 LLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDG 388 (458)
Q Consensus 310 ~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~g 388 (458)
+.|+++......... .......+...+... +++++|+||+|.-.... .++..++-.|+-
T Consensus 135 ~~H~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~-------------------~~~~~~in~Gsv 194 (251)
T d1nnwa_ 135 GVYGSPINPFDGEVL-AEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM-------------------TRYGRVVCPGSV 194 (251)
T ss_dssp EESSCSSCTTTCCCC-SSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE-------------------ETTEEEEEECCS
T ss_pred EEecCccCcccchhh-hhhHHHHHhhhcccccCceEEEEeccceEEEEE-------------------eeeeeccccccc
Confidence 889887654333221 111122333334433 68999999999743321 345578888988
Q ss_pred CCC
Q 046207 389 GNI 391 (458)
Q Consensus 389 G~~ 391 (458)
|.+
T Consensus 195 g~~ 197 (251)
T d1nnwa_ 195 GFP 197 (251)
T ss_dssp SSC
T ss_pred ccc
Confidence 865
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.12 E-value=4.9e-11 Score=113.28 Aligned_cols=73 Identities=16% Similarity=0.245 Sum_probs=50.0
Q ss_pred eEEEEEecCCCCCCc----------HHHHHHH----HhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-cc
Q 046207 155 YIFGIIGDLGQTYDS----------NQTFEHY----VSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQ 219 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~----------~~~l~~~----~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~ 219 (458)
+||+++||+|.+... ...++++ .++ ++|+||++||+++.... .......+.+.+..+.. .+
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~-~~D~vli~GDlfd~~~~---~~~~~~~~~~~~~~l~~~~i 76 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQE-NVDFILIAGDLFHSSRP---SPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHT-TCSEEEEESCSBSSSSC---CHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHc-CCCEEEECCCCCCCCCC---CHHHHHHHHHHHhhHHhcCC
Confidence 589999999986431 2233333 344 99999999999986431 22333445566666654 68
Q ss_pred ceEEccCCcccC
Q 046207 220 AWIWVPGNHELD 231 (458)
Q Consensus 220 P~~~v~GNHD~~ 231 (458)
|++.++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCCCccc
Confidence 999999999974
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.01 E-value=6.7e-10 Score=94.92 Aligned_cols=61 Identities=18% Similarity=0.208 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDS-NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+||+++||+|..... .++++.+.+. ++|.|+++||++.. ... +.+.. ...|++.+.||||.
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~-~~D~ii~~GD~~~~--------~~~----~~l~~--~~~~~~~v~GN~D~ 62 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDE-NVETVIHCGDFVSL--------FVI----KEFEN--LNANIIATYGNNDG 62 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHS-CCSEEEECSCCCST--------HHH----HHGGG--CSSEEEEECCTTCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhc-CCCEEEECCCccCH--------HHH----HHHhh--cCccEEEEcccccc
Confidence 589999999965322 2334444455 99999999999852 111 11111 24789999999995
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.75 E-value=1.3e-07 Score=82.02 Aligned_cols=46 Identities=22% Similarity=0.303 Sum_probs=35.0
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.|+++|.|+....... .......+..+..+.+++++|+||+|....
T Consensus 108 ~i~l~H~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lhGH~H~~~~ 153 (188)
T d1xm7a_ 108 RILLSHYPAKDPITER---YPDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (188)
T ss_dssp EEEEESSCSSCSSCCS---CHHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred EEEEEeCCCccccccc---cccchhHHHHHHHhcCceEEEEeeccCCcc
Confidence 6899999996544322 234556778899999999999999997543
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=7.9e-08 Score=91.41 Aligned_cols=188 Identities=15% Similarity=0.119 Sum_probs=91.7
Q ss_pred CCeEEEEEecCCCCCC-------cH----HHHHHHHh---CCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh
Q 046207 153 VPYIFGIIGDLGQTYD-------SN----QTFEHYVS---NPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA 217 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~-------~~----~~l~~~~~---~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~ 217 (458)
..++|+.++|+|.... .. ..++++.+ ..+++ ++|.+||++..... ....+.....+.|+.+.
T Consensus 7 ~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~--s~~~~g~~~~~~mn~~g- 83 (337)
T d1usha2 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE--SDLQDAEPDFRGMNLVG- 83 (337)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHH--HHTTTTHHHHHHHHHHT-
T ss_pred eEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHH--HHHhCChHHHHHHHhcC-
Confidence 3588999999995321 11 12333322 12555 56669999864320 00111222334444432
Q ss_pred ccceEEccCCcccCCCCCCCCcccCcccceeeccccCC-------CC-CCCCceEEEEcCeE--EEEEecCCCc------
Q 046207 218 YQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRA-------SQ-STSPLWYSIKRASA--YIIVLSSYSA------ 281 (458)
Q Consensus 218 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~~-~~~~~~ys~~~g~~--~fi~Lds~~~------ 281 (458)
.=..++||||+.+.. ..+..+.....+|.-. .. ..-..|.-++.+++ -||++-+...
T Consensus 84 --~Da~~~GNHEfd~G~-----~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~ 156 (337)
T d1usha2 84 --YDAMAIGNHEFDNPL-----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNP 156 (337)
T ss_dssp --CCEEECCGGGGSSCH-----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSC
T ss_pred --CeEEEechhhhccch-----HHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCc
Confidence 225688999986431 1111111222222100 00 11234556677774 5577654321
Q ss_pred -C------CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 282 -Y------GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 282 -~------~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
. ....+..+..-++|++. .+.+.+|+++|.+......... .......+...+...+||++|.||.|...
T Consensus 157 ~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~--~~~~~~~la~~~~~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 157 EYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGS--NAPGDVEMARALPAGSLAMIVGGHSQDPV 232 (337)
T ss_dssp CCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTT--SCCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred ccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCccccccccc--ccchhHHHHHhCcccCceEEecCccCccc
Confidence 0 01122333333445432 4678899999998754332111 01111233333344579999999999753
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=3.5e-08 Score=85.24 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=43.7
Q ss_pred eEEEEEecCCCCCCcH-HHHHHHHhCCCCcEEEEcCccccCCCCCCCchh-HHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSN-QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNR-RWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~-~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+||+++||+|...... +.++.+.+. ++|.+|++||++..+........ ......+.+..+ ..|++.+.||||.
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~-~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~GNhD~ 76 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQS-GAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--AHKVIAVRGNCDS 76 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHH-TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--GGGEEECCCTTCC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhc-CCCEEEEcCcccccCccchhhhccCcHHHHHHHHhc--CCcEEEecCCCCc
Confidence 6999999999543222 223333334 89999999999976542111111 111222222222 4689999999995
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.21 E-value=8.6e-07 Score=83.47 Aligned_cols=183 Identities=12% Similarity=0.115 Sum_probs=86.9
Q ss_pred CCeEEEEEecCCCCCCc-------------HH----HHHHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHH
Q 046207 153 VPYIFGIIGDLGQTYDS-------------NQ----TFEHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEK 214 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~-------------~~----~l~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 214 (458)
..++|+..+|+|..... .. .+++..+..+++ ++|.+||++....+.+....+. ..+-.
T Consensus 10 ~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G----~~~~~ 85 (322)
T d3c9fa2 10 NDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNG----LKSTP 85 (322)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTT----TTTHH
T ss_pred CEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCC----hHHHH
Confidence 57999999999963210 11 122222223566 5667999997643110000011 11122
Q ss_pred Hhhccce-EEccCCcccCCCCCCCCcccCcccceeeccccCC--------CC---CCCCceEEEEcC--eEEEEEecCCC
Q 046207 215 STAYQAW-IWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRA--------SQ---STSPLWYSIKRA--SAYIIVLSSYS 280 (458)
Q Consensus 215 l~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~--------~~---~~~~~~ys~~~g--~~~fi~Lds~~ 280 (458)
+...+++ ..++||||+.+.... ...+......+..|.-. .. .....|..+..+ ++.++++....
T Consensus 86 ~mn~lgyDa~t~GNHEfd~g~~~--l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~~~ 163 (322)
T d3c9fa2 86 IFIKQDYDLLTIGNHELYLWENS--KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLF 163 (322)
T ss_dssp HHTTSCCSEECCCGGGSSSHHHH--HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCC
T ss_pred HHhccCCcEEeecceecccchHH--HHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEeecc
Confidence 2233455 779999998542110 00011111111122110 00 012345556654 47888876543
Q ss_pred cCCC---C--------hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-C-ccEEEe
Q 046207 281 AYGK---Y--------TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-K-VDLVVA 347 (458)
Q Consensus 281 ~~~~---~--------~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~-Vdlvl~ 347 (458)
.... + ..+..|+++.++ .+.+.+|++.|.++-... .........+.+.. + ++++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~-------~~~~~~~~~la~~~~~~~~~iig 232 (322)
T d3c9fa2 164 DFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW-------GEFYQVHQYLRQFFPDTIIQYFG 232 (322)
T ss_dssp CCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT-------CHHHHHHHHHHHHCTTSEEEEEE
T ss_pred ccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc-------cccchHHHHHHHhCCCCCEEEec
Confidence 3211 1 112245554443 457889999998863321 11112222233332 3 446899
Q ss_pred ccccc
Q 046207 348 GHVHS 352 (458)
Q Consensus 348 GH~H~ 352 (458)
||+|.
T Consensus 233 GHsH~ 237 (322)
T d3c9fa2 233 GHSHI 237 (322)
T ss_dssp CSSCC
T ss_pred ccccc
Confidence 99995
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.95 E-value=5e-05 Score=70.31 Aligned_cols=175 Identities=16% Similarity=0.133 Sum_probs=87.5
Q ss_pred CeEEEEEecCCCCCC--------------cHH----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHH
Q 046207 154 PYIFGIIGDLGQTYD--------------SNQ----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS 215 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~--------------~~~----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l 215 (458)
.++|+..+|+|..-. ... .++++.++..--++|-+||++..... ....+.....+.++.+
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~--~~~~~g~~~~~~~n~~ 79 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY--FNQYRGLADRYFMHRL 79 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH--HHHHTTHHHHHHHHHT
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh--HhhhcchhHHHHHHhc
Confidence 478999999985421 122 23333333133588999999865320 0000111122333332
Q ss_pred hhccceEEccCCcccCCCCCCCCcccCcccceeeccccC-------CC---CCCCCceEEEEcCeEE--EEEecCCCc--
Q 046207 216 TAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR-------AS---QSTSPLWYSIKRASAY--IIVLSSYSA-- 281 (458)
Q Consensus 216 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~-------~~---~~~~~~~ys~~~g~~~--fi~Lds~~~-- 281 (458)
-.=..++||||+.+... .+........+|.- +. ...-..|..++.++++ ||++-+...
T Consensus 80 ---gyDa~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~ 151 (302)
T d2z1aa2 80 ---RYRAMALGNHEFDLGPG-----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTRE 151 (302)
T ss_dssp ---TCCEEECCGGGGTTCHH-----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHH
T ss_pred ---ccccccccchhhhcChh-----HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEecccccccc
Confidence 23367999999865321 11111111111100 00 0112346667777754 555544311
Q ss_pred ---------CCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEecccc
Q 046207 282 ---------YGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVH 351 (458)
Q Consensus 282 ---------~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H 351 (458)
+....+..++..++|++ .+.+-+|++.|..... + ..+.++. +||++++||.|
T Consensus 152 ~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~~----------d-----~~la~~~~giD~ii~gh~h 213 (302)
T d2z1aa2 152 ISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE----------D-----LKLARRLVGVQVIVGGHSH 213 (302)
T ss_dssp HSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH----------H-----HHHHTTCSSCCEEEECSSC
T ss_pred cccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcch----------h-----hHHHhcCCCeeeeecCccc
Confidence 11113334444455544 5567899999986421 0 1233333 69999999999
Q ss_pred ccccc
Q 046207 352 SYERT 356 (458)
Q Consensus 352 ~y~r~ 356 (458)
.....
T Consensus 214 ~~~~~ 218 (302)
T d2z1aa2 214 TLLGS 218 (302)
T ss_dssp CCBSC
T ss_pred eeecc
Confidence 85443
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.51 E-value=0.00011 Score=54.89 Aligned_cols=68 Identities=18% Similarity=0.173 Sum_probs=44.4
Q ss_pred CceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC----C--C
Q 046207 67 RSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS----G--N 136 (458)
Q Consensus 67 ~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----g--~ 136 (458)
+++.|+|..+...+. -.|+|....+.......+. ...++|++|+|+|.|.+||.. | .
T Consensus 15 ~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~ 81 (93)
T d1x4xa1 15 TCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCRVQALSVVGAGP 81 (93)
T ss_dssp TEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEEEEEECSSCCCC
T ss_pred CeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEEEEEEECCcCcC
Confidence 699999986543322 3566666555433322221 123568999999999999865 3 3
Q ss_pred ccceEEEECCC
Q 046207 137 ATRRFHFTTPP 147 (458)
Q Consensus 137 ~~~~~~f~T~p 147 (458)
.++.-.|+|+|
T Consensus 82 ~S~~~~~~Tpp 92 (93)
T d1x4xa1 82 FSEVVACVTPP 92 (93)
T ss_dssp BCCCEEEECCC
T ss_pred CCCcEEEEeCC
Confidence 45677899977
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.50 E-value=0.00066 Score=50.02 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=48.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.+..-.+ +++.|+|..+... ....|+|....+......... ....-...++|++|+|+|.|.++
T Consensus 3 aP~~l~v~~~~~--~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~ 72 (92)
T d1tdqa2 3 APKNLRVGSRTA--TSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVG 72 (92)
T ss_dssp CCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEE
T ss_pred cCcCCEEEEecC--CEEEEEEEecCCcccceEEEEEEcCCCcceeeEEE--------ecCCCeeEEEECCccCCCEEEEE
Confidence 688888876554 6999999876533 334678887654332221111 01233456799999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 73 V~a 75 (92)
T d1tdqa2 73 ISA 75 (92)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.00019 Score=53.75 Aligned_cols=84 Identities=32% Similarity=0.395 Sum_probs=54.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC--CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK--YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|.++.++......+++.|+|..+... ..-.|+|....+...... ... .+-...++|+||+|||.|..
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~----~~v------~~~~~~~~l~gL~P~t~Y~v 71 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE----ATI------PGHLNSYTIKGLKPGVVYEG 71 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEE----EEE------CSSCCEEEECSCCSSEEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeee----ecc------CCCccEEEECCcccCcEEEE
Confidence 688888887765558999999986421 224678887654332110 011 12234568999999999999
Q ss_pred EeCC----CCcc-ceEEEECC
Q 046207 131 QLGS----GNAT-RRFHFTTP 146 (458)
Q Consensus 131 ~v~~----g~~~-~~~~f~T~ 146 (458)
+|.. |.+. ....|+|.
T Consensus 72 ~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 72 QLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp EEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEeCCCccCcEEEEEEec
Confidence 9875 4321 26677774
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.42 E-value=0.00016 Score=54.26 Aligned_cols=78 Identities=13% Similarity=0.249 Sum_probs=48.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC-CCCCeEEEE----ecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE-KYPNVVTHW----EANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~-~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+.-.+. +++.|+|..+.. .....++|. ...+ .... .. . ...++|++|+|+|.
T Consensus 5 ~p~~L~~~~~~~--~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~--~~~~------~~--~-----~t~~~i~~L~p~t~ 67 (94)
T d1x5aa1 5 SGLSLKLVKKEP--RQLELTWAGSRPRNPGGNLSYELHVLNQDE--EWHQ------MV--L-----EPRVLLTKLQPDTT 67 (94)
T ss_dssp CSCCCCEEEEET--TEEEEECCCCCSSCCSSCCEEEEEEECSSC--EEEE------EE--S-----SSEEEEESCCSSCE
T ss_pred CCCceEEEEcCC--CEEEEEEecccCCCCCcEEEEEEEEecCCc--eEEE------ee--c-----cCEEEECCCCCCCE
Confidence 565666665544 799999976532 222334443 3322 1110 00 1 12467999999999
Q ss_pred EEEEeCC------CCccceEEEECCC
Q 046207 128 YFYQLGS------GNATRRFHFTTPP 147 (458)
Q Consensus 128 Y~Y~v~~------g~~~~~~~f~T~p 147 (458)
|.+||.. |..|+...|+|.|
T Consensus 68 Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 68 YIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 9999875 4456788999987
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.00019 Score=53.56 Aligned_cols=82 Identities=24% Similarity=0.318 Sum_probs=47.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCC----C-eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYP----N-VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~-~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+..-+. +++.|+|..+..... . .++|.............. .....++|+||+|+|.
T Consensus 3 ~P~~~~v~~~~~--~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~-----------~~~~~~~v~~L~p~t~ 69 (96)
T d1x5xa1 3 MPASPVLTKAGI--TWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD-----------GEDLAYTVKNLRRSTK 69 (96)
T ss_dssp CCCCCEEEEECS--SEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE-----------ESCSEEEEESCCSSCE
T ss_pred cCCCCEEEEecC--CEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeec-----------CCCCEEEECCCCCCCE
Confidence 345555554433 699999986542221 1 334433333222221111 0112357899999999
Q ss_pred EEEEeCC----C--CccceEEEECCC
Q 046207 128 YFYQLGS----G--NATRRFHFTTPP 147 (458)
Q Consensus 128 Y~Y~v~~----g--~~~~~~~f~T~p 147 (458)
|.+||.. | ..|....|+|.|
T Consensus 70 Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 70 YKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 9999875 4 234577889987
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.38 E-value=0.00029 Score=53.35 Aligned_cols=85 Identities=18% Similarity=0.191 Sum_probs=50.4
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|.-+.+... .++++|.|..+...+ .-.|+|....+.......... . .......++|++|+|+|.
T Consensus 5 ~P~~~~~~~~---~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~---~----~~~~~~~~~i~~L~p~t~ 74 (101)
T d2haza1 5 SPSIDQVEPY---SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA---K----EASMEGIVTIVGLKPETT 74 (101)
T ss_dssp CCEEEEEEEC---SSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEH---H----HHHHHSEEEECSCCTTCE
T ss_pred CCccCEEEee---CCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeee---e----cccceeEEEecCCCCCeE
Confidence 5643333322 268999999764332 235677765543322211110 0 011123468999999999
Q ss_pred EEEEeCC------CCccceEEEECCC
Q 046207 128 YFYQLGS------GNATRRFHFTTPP 147 (458)
Q Consensus 128 Y~Y~v~~------g~~~~~~~f~T~p 147 (458)
|.+||.. |..++.-.|+|.|
T Consensus 75 Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 75 YAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 9999875 4456677899987
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00035 Score=51.72 Aligned_cols=81 Identities=15% Similarity=0.223 Sum_probs=52.6
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.+..... +++.|+|.-+... ....|+|.............. .....+.|++|+|+|.|.+|
T Consensus 4 aP~n~~~~~~s~--~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~ 70 (92)
T d1qg3a1 4 APQNPNAKAAGS--RKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEMK 70 (92)
T ss_dssp CCEEEEEEECST--TCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEEE
T ss_pred cCCCCEEEEccC--CEEEEEEEecCCCccceEEeeeeccccccEEEEec-----------CCccEEEECCCCCCcEEEEE
Confidence 687888776543 6999999876432 234677877654432211110 11235778999999999999
Q ss_pred eCC------CCccceEEEECC
Q 046207 132 LGS------GNATRRFHFTTP 146 (458)
Q Consensus 132 v~~------g~~~~~~~f~T~ 146 (458)
|.. |..|....++|.
T Consensus 71 V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 71 VCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEEECSSCBCCCCCCEEEECC
T ss_pred EEEEeCCcCcCCCCCEEEEcC
Confidence 875 344556677774
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00082 Score=49.85 Aligned_cols=80 Identities=24% Similarity=0.316 Sum_probs=49.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.... .+++.|.|..+...+. -.|+|....+...... .. ..-..+++|++|+|++.|
T Consensus 3 ~P~~~~~~~~~--~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y 69 (93)
T d2vkwa2 3 APKLEGQMGED--GNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----RL------PSGSDHVMLKSLDWNAEY 69 (93)
T ss_dssp CCEEEEEECTT--SSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----EE------CTTCCEEEECSCCTTCEE
T ss_pred CCccCEeEEcC--CCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeee-----ec------cCCceEEEEeccccceEE
Confidence 57666555333 4799999998753322 3677777654322111 00 111235679999999999
Q ss_pred EEEeCC----C--CccceEEEECC
Q 046207 129 FYQLGS----G--NATRRFHFTTP 146 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~ 146 (458)
.+||.. | ..+ ...|+|.
T Consensus 70 ~~~V~A~N~~G~s~ps-~~~~~T~ 92 (93)
T d2vkwa2 70 EVYVVAENQQGKSKAA-HFVFRTA 92 (93)
T ss_dssp EEEEEEEETTEECCCE-EEEEECC
T ss_pred EEEEEEEcCCCCcCCE-eEEEEec
Confidence 999986 3 233 5678875
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.25 E-value=0.00057 Score=50.23 Aligned_cols=70 Identities=14% Similarity=0.266 Sum_probs=46.0
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|.++.++.-. .+++.|+|..+... ..-.|+|....+....... .. ..-...++|++|+|+|.|.++
T Consensus 3 ~P~~l~v~~vt--~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~----~v------~~~~~~~~i~~L~p~t~Y~~~ 70 (89)
T d1fnfa3 3 SPTGIDFSDIT--ANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----RV------PHSRNSITLTNLTPGTEYVVS 70 (89)
T ss_dssp CCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----EE------ETTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEE----EE------CCCccEEEECCCcccCEEEEE
Confidence 68787777544 47999999876533 2346788876554332110 11 111234689999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 71 V~a 73 (89)
T d1fnfa3 71 IVA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.25 E-value=0.00023 Score=54.70 Aligned_cols=87 Identities=22% Similarity=0.461 Sum_probs=52.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.......+++.|+|..+...... .|.|....+..... ...... .+-....+|++|+|++.|
T Consensus 14 pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~L~p~t~Y 85 (111)
T d1x5ka1 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD--WVIEPV------VGNRLTHQIQELTLDTPY 85 (111)
T ss_dssp CCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTT--SEEEEE------STTCSEEEECSCCSSSEE
T ss_pred CCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcce--eEEEEe------CCCeeEEEECCCCCCCEE
Confidence 677788776544457999999876433222 45665544322110 000011 112234678999999999
Q ss_pred EEEeCC------CCccceEEEECCC
Q 046207 129 FYQLGS------GNATRRFHFTTPP 147 (458)
Q Consensus 129 ~Y~v~~------g~~~~~~~f~T~p 147 (458)
.+||.. |..|+...|+|+.
T Consensus 86 ~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 86 YFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEcCCCCcCCCCCEEEECCC
Confidence 999875 3456677888865
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.25 E-value=0.00048 Score=51.80 Aligned_cols=81 Identities=17% Similarity=0.322 Sum_probs=51.3
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+++...++ +++.|+|..+.... .-.|+|....+....... .. ......+|++|+|+|.|
T Consensus 6 ~p~~~~~~~~s~--~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y 72 (98)
T d1x5la1 6 QVVVIRQERAGQ--TSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----LK------AVTTRATVSGLKPGTRY 72 (98)
T ss_dssp CCCCEECSCBCS--SCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----EE------ESSSEEEECSCCTTCEE
T ss_pred CCCceEEEeccC--CEEEEEEECCCCCCCCEEEEEEEeecccccceeeEE-----ec------CCceEEEECCCCCCCEE
Confidence 466666665554 69999998764332 235777765543222111 10 11235679999999999
Q ss_pred EEEeCC------CCccceEEEECC
Q 046207 129 FYQLGS------GNATRRFHFTTP 146 (458)
Q Consensus 129 ~Y~v~~------g~~~~~~~f~T~ 146 (458)
.+||.. |..++...|+|.
T Consensus 73 ~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 73 VFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EECEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEEEcCCCCcCCCCCEEEEcC
Confidence 999875 445667788885
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.24 E-value=0.00059 Score=52.23 Aligned_cols=83 Identities=22% Similarity=0.292 Sum_probs=52.6
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+..... +++.|+|.-+.... .-.|.|....+........ .......++|++|+|+++
T Consensus 13 ~P~~l~~~~~~~--~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~L~p~t~ 80 (107)
T d1x5fa1 13 APRDVVASLVST--RFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT----------SHPGEMQVTIQNLMPATV 80 (107)
T ss_dssp CCEEEEEEEECS--SCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEEC----------SSTTCSEEEECSCCTTCE
T ss_pred CCCccEEEEecC--CEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEE----------eCCCccEEEecCCCCCCE
Confidence 788888776653 69999998653221 1266666654433322111 112235578999999999
Q ss_pred EEEEeCC----CC--ccceEEEECCC
Q 046207 128 YFYQLGS----GN--ATRRFHFTTPP 147 (458)
Q Consensus 128 Y~Y~v~~----g~--~~~~~~f~T~p 147 (458)
|.+||.. |. .+....++|.|
T Consensus 81 Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 81 YIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 9999875 32 34567777766
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.21 E-value=0.00041 Score=52.17 Aligned_cols=70 Identities=17% Similarity=0.230 Sum_probs=44.0
Q ss_pred CCceEEEEEcCCCC-----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC----C-
Q 046207 66 GRSVIVSWVTPDEK-----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS----G- 135 (458)
Q Consensus 66 ~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----g- 135 (458)
.+++.|+|..+... ..-.|+|.......+..+. .. . ...++|++|+|++.|.|||.. |
T Consensus 16 ~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~------~~----~--~~~~~v~~L~p~t~Y~frV~A~N~~G~ 83 (97)
T d2crza1 16 AKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY------QG----S--EVECTVSSLLPGKTYSFRLRAANKMGF 83 (97)
T ss_dssp SSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE------EE----S--CSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred CCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEee------cC----C--ceEEEEcCCCCCEEEEEEEEEecCCeE
Confidence 37999999865322 2246667665544333221 10 1 123578999999999999875 3
Q ss_pred -CccceEEEECCC
Q 046207 136 -NATRRFHFTTPP 147 (458)
Q Consensus 136 -~~~~~~~f~T~p 147 (458)
..|+.-.++|+|
T Consensus 84 s~~S~~~~~~T~p 96 (97)
T d2crza1 84 GPFSEKCDITTAP 96 (97)
T ss_dssp CCCCCCEEEECCC
T ss_pred cCCcCCCeEEeCc
Confidence 345677788876
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.17 E-value=0.00071 Score=49.67 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=46.3
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.+....+ +++.|+|..+... ..-.|+|....+....... +. .-...+.|+||+|+|.|.++
T Consensus 3 ~P~~l~v~~v~~--~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~ 69 (88)
T d1qr4a2 3 SPKGISFSDITE--NSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----VD------GSKTRTKLVKLVPGVDYNVN 69 (88)
T ss_dssp CCSCEEEESCCS--SCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----EE------TTCCEEEECSCCSSCEEEEE
T ss_pred CCcceEEEEecC--CEEEEEEEcccEeeceEEEEEEeccCCceEEEE-----ec------CCccEEEECCCCCCCEEEEE
Confidence 688877776654 6999999866433 3347788876654333221 11 11234789999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 70 V~a 72 (88)
T d1qr4a2 70 IIS 72 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.15 E-value=0.00062 Score=51.42 Aligned_cols=84 Identities=17% Similarity=0.228 Sum_probs=52.8
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC------CCeEEEEecCCCCc-eEEEEEEEEEEecccccceEEEEEecCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY------PNVVTHWEANSKRK-HKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 124 (458)
.+|..|++..-.. +++.|+|..+.... .-.|+|....+... .... . .......+.|++|+|
T Consensus 4 ~pP~~l~v~~~~~--~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p 71 (104)
T d2b5ib2 4 MAPISLQVVHVET--HRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLL----T------LKQKQEWICLETLTP 71 (104)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCE----E------ECSCCCEEEECSCCT
T ss_pred CCCCCcEEEEEeC--CEEEEEEccccccccccceeEEEEEEecccccceeeeEE----e------cCCCcEEEEECCCCC
Confidence 4788888887764 69999998774321 12456655543211 1100 0 011233468899999
Q ss_pred CCEEEEEeCC----CC------ccceEEEECCC
Q 046207 125 DTKYFYQLGS----GN------ATRRFHFTTPP 147 (458)
Q Consensus 125 ~t~Y~Y~v~~----g~------~~~~~~f~T~p 147 (458)
+|.|.+||.. |. +|+...|+|.|
T Consensus 72 ~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 72 DTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp TCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred CCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 9999999875 31 24567899876
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.15 E-value=0.00044 Score=51.40 Aligned_cols=81 Identities=19% Similarity=0.283 Sum_probs=48.7
Q ss_pred CccEEEEecCCCCCceEEEEEcCCCCCCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 54 PEQVHITQGDHDGRSVIVSWVTPDEKYPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 54 p~~v~~~~~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
|..+++.... .++++|+|.-+...... .|+|.............. .....++|++|+|+|.|.
T Consensus 4 ~~~l~~~~~t--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~ 70 (95)
T d2djsa1 4 VPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYV 70 (95)
T ss_dssp CSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEE
T ss_pred CCccEEEeec--CCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEEE
Confidence 3356665544 36999999876543333 344554443322111100 011346799999999999
Q ss_pred EEeCC----C--CccceEEEECCC
Q 046207 130 YQLGS----G--NATRRFHFTTPP 147 (458)
Q Consensus 130 Y~v~~----g--~~~~~~~f~T~p 147 (458)
+||.. | ..|+...|+|.|
T Consensus 71 ~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 71 VQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCCCCCCCCCEEEEeCC
Confidence 99875 3 335677899987
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.12 E-value=0.0013 Score=48.36 Aligned_cols=71 Identities=21% Similarity=0.237 Sum_probs=45.9
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+++..-. .+++.|+|..+... ..-.|+|....+...... .... .-...++|.||+|+|.|.+
T Consensus 3 d~P~~l~v~~~s--~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~----~~~~------~~~~~~~i~~L~p~t~Y~~ 70 (90)
T d1tena_ 3 DAPSQIEVKDVT--DTTALITWFKPLAEIDGIELTYGIKDVPGDRTT----IDLT------EDENQYSIGNLKPDTEYEV 70 (90)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEEETTCTTCCEE----EEEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCCCcEEEEec--CCEEEEEEEeCceEeccEEEEEEEcCCCceeEE----EEec------CCcceeeEeeecCCCEEEE
Confidence 368888877544 47999999876533 334778877654322111 0111 1123468999999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 71 ~V~a 74 (90)
T d1tena_ 71 SLIS 74 (90)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0014 Score=48.18 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=44.6
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC--CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK--YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|..+++..-. .+++.|+|..+... ..-.|+|....+...... ... ..-...++|+||+|+|.|.+
T Consensus 3 pP~~l~~~~~~--~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~ 70 (91)
T d1fnfa2 3 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAE----LSI------SPSDNAVVLTNLLPGTEYVV 70 (91)
T ss_dssp CCEEEEEESCC--SSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEE----EEE------CTTCCEEEECSCCTTCEEEE
T ss_pred cCCceEEEEeC--CCEEEEEEEecCCCCcceeEEEEEECCCCccEEE----EEe------CCCceEEEEeceeCCCEEEE
Confidence 57777776444 47999999866321 223678887655432211 011 11223478999999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 71 ~V~a 74 (91)
T d1fnfa2 71 SVSS 74 (91)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=0.0028 Score=47.84 Aligned_cols=72 Identities=17% Similarity=0.244 Sum_probs=44.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC-C----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY-P----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
.+|..|.+....++ +.+.|.|..+.... . -.|+|....+....... .. ..-...+.|.+|+|+|
T Consensus 6 dPP~nl~v~~~~~~-~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~----~~------~~~~t~~~i~~L~p~t 74 (105)
T d1erna2 6 DAPVGLVARLADES-GHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRV----EI------LEGRTECVLSNLRGRT 74 (105)
T ss_dssp CCCEEEEEEECCC--CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEE----EE------CTTCCEEEECSCCSSC
T ss_pred CCCCCCEEEEecCC-CcEEEEeeeccccccceEEEEEEEEecCCCCCceEEE----ee------cCCccEEEEeCCCCCc
Confidence 47888988887665 68999999764221 2 25666665432221110 00 0111346799999999
Q ss_pred EEEEEeCC
Q 046207 127 KYFYQLGS 134 (458)
Q Consensus 127 ~Y~Y~v~~ 134 (458)
.|.+||..
T Consensus 75 ~Y~~rVRa 82 (105)
T d1erna2 75 RYTFAVRA 82 (105)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999864
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=96.99 E-value=0.0022 Score=46.96 Aligned_cols=66 Identities=24% Similarity=0.260 Sum_probs=41.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
.+|..+.+..-.. +++.|+|.-+. .......|....+.. ..... .. -..+++||+|+++|.||
T Consensus 5 ~~P~~l~~~~~~~--~sv~lsW~~p~-~~~~i~~Y~i~~~~~-~~~~~--------~~-----t~~~~~~L~p~t~Y~~~ 67 (88)
T d1k85a_ 5 TAPTNLASTAQTT--SSITLSWTAST-DNVGVTGYDVYNGTA-LATTV--------TG-----TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCS-CCSSEEEEEEEESSS-EEEEE--------SS-----SEEEECCCCSSCEEEEE
T ss_pred CCCCCcEEEEecC--CEEEEEEeCCC-CCCCEEEEEEEccce-EEEec--------CC-----CEEEECCCCCCCEEEEE
Confidence 3687777765443 69999998654 234566666543221 11100 11 13578999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 68 V~A 70 (88)
T d1k85a_ 68 VKA 70 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.0007 Score=51.28 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=48.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+..... +++.|+|..+.... .-.|+|..........+... ...++|+||+|+|.|
T Consensus 13 ~P~~l~v~~~s~--~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y 77 (103)
T d1x5ga1 13 PAPNLRAYAASP--TSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTEY 77 (103)
T ss_dssp CCSSCEEEEEET--TEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCEE
T ss_pred cCCCcEEEEccC--CEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEecc-------------ccEEecCCCCCCCEE
Confidence 566777766543 69999998654322 23567776654433222111 123578999999999
Q ss_pred EEEeCC----C--CccceEEEECC
Q 046207 129 FYQLGS----G--NATRRFHFTTP 146 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~ 146 (458)
.++|.. | ..++.-.++|.
T Consensus 78 ~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 78 SFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEEEcCCcCcCCCCCEEEEcC
Confidence 999864 3 33445566664
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.0018 Score=47.39 Aligned_cols=70 Identities=19% Similarity=0.200 Sum_probs=44.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.++.-.+ +++.|+|..+.... ...++|............ ... .. .-..+|+||+|+|.|++|
T Consensus 2 pP~~l~~~~v~~--~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~----~~~----~~--~~~~~i~~L~p~t~Y~~~ 69 (90)
T d1fnha1 2 APTDLKFTQVTP--TSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NLA----PD--SSSVVVSGLMVATKYEVS 69 (90)
T ss_dssp CCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEESSSCSCCCEE----EEC----TT--CCEEEECSCCTTCEEEEE
T ss_pred CCCCEEEEEecC--CEEEEEEEccceeccceEEEEEeeeCCCceEEE----EeC----CC--CeEEEEecccCceEEEEE
Confidence 577777776554 69999998775332 345677665443221110 000 11 124689999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 70 V~a 72 (90)
T d1fnha1 70 VYA 72 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 976
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.96 E-value=0.0017 Score=48.63 Aligned_cols=86 Identities=10% Similarity=0.110 Sum_probs=52.7
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..+++..... +++.|+|....... .-.|+|....+.......-. .. .......+|.+|+|+
T Consensus 3 ~~P~~~~~~~~s~--tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--~~------~~~~~~~~i~~L~p~ 72 (101)
T d1x4ya1 3 AGPYITFTDAVNE--TTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--MV------EGDRYWHSISHLQPE 72 (101)
T ss_dssp SCCEEEEEECSSS--SCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--EE------ETTCCEEEECSCCTT
T ss_pred CCCcccEEEEEcC--CEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEE--EE------cCCeeEEEEcCCCCC
Confidence 4787888776654 69999998653211 12577776554322111100 11 111234568999999
Q ss_pred CEEEEEeCC------CCccceEEEECCC
Q 046207 126 TKYFYQLGS------GNATRRFHFTTPP 147 (458)
Q Consensus 126 t~Y~Y~v~~------g~~~~~~~f~T~p 147 (458)
+.|.+||.. |..|+...++|..
T Consensus 73 t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 73 TSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp CEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 999999875 3456678888854
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.95 E-value=0.00026 Score=61.82 Aligned_cols=64 Identities=25% Similarity=0.328 Sum_probs=41.4
Q ss_pred EEEEEecCCCCCCc-HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDS-NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~-~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
|+.++||+|..... .+.++.+......|.++++||+++.+. +.. +.++-+ ...-+..+.||||.
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp----~s~------~vl~~l-~~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGA----ENV------ECLELI-TFPWFRAVRGNHEQ 78 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSS----CHH------HHHGGG-GSTTEEECCCHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccccCc----cHH------HHHHHh-hccccccccCcHHH
Confidence 79999999966332 223333332336689999999999876 221 222222 33457889999995
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.00051 Score=52.67 Aligned_cols=72 Identities=19% Similarity=0.254 Sum_probs=40.6
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|....+....-..+++.|+|..+...+.. .|+|....+... ..... .......++|+||+|+|+|
T Consensus 13 ~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~-~~~~~---------~~~~~~~~~i~~L~p~t~Y 82 (108)
T d1wf5a1 13 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWT-VLLAS---------VDPKATSVTVKGLVPARSY 82 (108)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCE-EEESS---------CCTTCCEEEEESCCTTCEE
T ss_pred CCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCce-EEeee---------ecCCccEEEECCCCCCCEE
Confidence 344433444433347999999876433322 455655443211 11110 1112234678999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.|||..
T Consensus 83 ~frV~A 88 (108)
T d1wf5a1 83 QFRLCA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.94 E-value=0.00084 Score=49.21 Aligned_cols=70 Identities=20% Similarity=0.257 Sum_probs=45.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.+..-.. +++.|+|.-+... ..-.|+|....+..... . .....-...++|++|+|+|.|.+|
T Consensus 3 aP~nl~v~~~~~--~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~L~p~t~Y~~~ 70 (89)
T d1fnha3 3 APSNLRFLATTP--NSLLVSWQPPRARITGYIIKYEKPGSPPREV-V---------PRPRPGVTEATITGLEPGTEYTIY 70 (89)
T ss_dssp CCEEEEEEEEET--TEEEEEEECCSSCCSEEEEEEECTTSCCEEC-T---------TCCCTTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEecC--CEEEEEEeCCCcCCceEEEEEeeccCCccEE-E---------EEcCCCccEEEEEeeeCCCEEEEE
Confidence 687888876554 6999999876533 23467787655422110 0 001112335789999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 71 V~a 73 (89)
T d1fnha3 71 VIA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.92 E-value=0.0021 Score=48.84 Aligned_cols=68 Identities=19% Similarity=0.259 Sum_probs=37.1
Q ss_pred CceEEEEEcCCCCCCC----eEEEEecCCC-CceEEEEEEEEEE-ecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 67 RSVIVSWVTPDEKYPN----VVTHWEANSK-RKHKTHSIIKTYR-YFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 67 ~~~~i~W~t~~~~~~~----~v~y~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
++++|+|..+...+.. .|+|...... .+........... .......-....+|+||+|+|+|.+||..
T Consensus 14 ~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A 87 (107)
T d2ic2a1 14 ESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 87 (107)
T ss_dssp --EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred CEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEEE
Confidence 6999999987543333 4566554332 2222221111000 00112334567789999999999999986
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.88 E-value=0.0026 Score=46.95 Aligned_cols=71 Identities=14% Similarity=0.283 Sum_probs=46.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+..-.. ++++|+|.-+... ....|+|....+..... .+.. ..-...+++++|+|+|+|.+
T Consensus 5 ~~P~~l~v~~v~~--~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~------~~~~----~~~~~~~~i~~L~p~t~Y~v 72 (93)
T d1tdqa1 5 DGPTQILVRDVSD--TVAFVEWTPPRAKVDFILLKYGLVGGEGGKT------TFRL----QPPLSQYSVQALRPGSRYEV 72 (93)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEESSSSCCCE------EEEE----CTTCSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEeCC--CEEEEEEEccccCCCceEEEEEeccCcceee------EEEe----CCCceEEEEeCcccceEEEE
Confidence 3788888877654 6999999866443 23477787765432211 1111 11123468999999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 73 ~V~a 76 (93)
T d1tdqa1 73 SISA 76 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9876
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.86 E-value=0.00077 Score=50.92 Aligned_cols=82 Identities=16% Similarity=0.326 Sum_probs=49.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC--CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE--KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
.+|..+.+....+ +++.|+|..+.. ...-.|+|............ .. .. ....|+||+|+|.|.
T Consensus 12 ~~P~~~~~~~~~~--~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~-----~~-----~~--~~~~i~~L~p~t~Y~ 77 (102)
T d1x5za1 12 GQPLNFKAEPESE--TSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT-----IE-----PG--TSYRLQGLKPNSLYY 77 (102)
T ss_dssp CCCEEEEEECSSS--SEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE-----EC-----SS--SEEEEECCCTTCEEE
T ss_pred cCCCCeEEEEccC--CEEEEEEECCCCCCccceEEEEEeCCCCceEEEE-----cC-----Cc--CEEEECCCCCCCEEE
Confidence 3687877775443 699999987531 11235666654432211110 00 11 135789999999999
Q ss_pred EEeCC----C--CccceEEEECCC
Q 046207 130 YQLGS----G--NATRRFHFTTPP 147 (458)
Q Consensus 130 Y~v~~----g--~~~~~~~f~T~p 147 (458)
+||.. | ..+..-.++|+.
T Consensus 78 ~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 78 FRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp ECEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCCEeCCCCCEEEEcCC
Confidence 99864 3 234566788764
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.86 E-value=0.0035 Score=45.85 Aligned_cols=69 Identities=22% Similarity=0.259 Sum_probs=45.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.+..-.. +++.|+|.-+... ..-.|+|....+....... . ..-.....|++|+|||.|.++
T Consensus 4 pP~~l~v~~~~~--~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p~t~Y~~~ 70 (90)
T d1fnha2 4 PPRRARVTDATE--TTITISWRTKTETITGFQVDAVPANGQTPIQRT-----I------KPDVRSYTITGLQPGTDYKIY 70 (90)
T ss_dssp CCEEEEEEEECS--SEEEEEEECCSSCCCCEEEEEEESSSSCCEEEE-----C------CTTCSEEEEESCCTTCEEEEE
T ss_pred cCCCCEEEEecC--CEEEEEEECCCCCCceeEEEEEEccCCceEEEe-----c------CCCccEEEeCCCCCCcEEEEE
Confidence 688888876554 6999999865433 3446778766543222111 0 111234688999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 71 V~a 73 (90)
T d1fnha2 71 LYT 73 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.83 E-value=0.0016 Score=48.26 Aligned_cols=71 Identities=18% Similarity=0.208 Sum_probs=42.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCC-----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYP-----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+..-. .+++.|.|..+..... -.|+|+...+....... ... ........|++|+|+|.
T Consensus 9 ~P~~~~v~~~s--~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~----~~~-----~~~~~~~~i~~L~p~t~ 77 (95)
T d2ibga1 9 VPELLEIEEYS--ETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKA----TIE-----GAHARSFKIAPLETATM 77 (95)
T ss_dssp CCEECCCBCCS--SSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEE----EEE-----CTTCCEEEECSCCTTCE
T ss_pred CCcCeEEEEeC--CCEEEEEEEeeeeccCCcccccceeEeeeeecceeeee----ecc-----CCceeEEEEeeccCCeE
Confidence 56555554433 4799999986532221 26788876543321111 110 11234568999999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.+||..
T Consensus 78 Y~~~V~A 84 (95)
T d2ibga1 78 YEFKLQS 84 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.80 E-value=0.0041 Score=46.68 Aligned_cols=71 Identities=11% Similarity=0.057 Sum_probs=42.5
Q ss_pred CCCccEEEEe--cCCCCCceEEEEEcCCCC----CCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecC
Q 046207 52 NAPEQVHITQ--GDHDGRSVIVSWVTPDEK----YPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKR 121 (458)
Q Consensus 52 ~~p~~v~~~~--~~~~~~~~~i~W~t~~~~----~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 121 (458)
.+|..+.+.. .....+++.|+|..+... +.. .|+|.............. ....++|.+
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~~------------~~~~~~i~~ 71 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTG------------HQTQFKVFD 71 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEEE------------TCSEEEECC
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeeccc------------ceeEEEeCC
Confidence 3677666543 344457899999987421 112 556666555443322111 112468999
Q ss_pred CCCCCEEEEEeCC
Q 046207 122 LKYDTKYFYQLGS 134 (458)
Q Consensus 122 L~p~t~Y~Y~v~~ 134 (458)
|+|+|.|.+||..
T Consensus 72 L~p~t~Y~~rVra 84 (103)
T d1f6fb2 72 LYPGQKYLVQTRC 84 (103)
T ss_dssp CCTTCEEEEEEEE
T ss_pred CCcceEEEEEEEE
Confidence 9999999999875
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0024 Score=47.34 Aligned_cols=73 Identities=14% Similarity=0.194 Sum_probs=46.1
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC--CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK--YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
.+|..+++..-.+. +++.|+|..+... ..-.|+|....+....... ... ..-...++|+||+|||.|.
T Consensus 3 ~PP~~l~v~~~~~t-s~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~---~~~------~~~~~~~~i~~L~p~t~Y~ 72 (94)
T d1fnfa1 3 SPPTNLHLEANPDT-GVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE---EVV------HADQSSCTFDNLSPGLEYN 72 (94)
T ss_dssp CCCEEEEEEECSSS-SCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEE---EEE------CTTCCEEECCCCCTTSCEE
T ss_pred CcCcCcEEEEecCC-CEEEEEeeCCCCCCeeEEEEEEEEecccCceEEE---EEe------CCCccEEEECCCCCCCEEE
Confidence 36888888765543 5689999876432 2346778866543221110 111 1123457899999999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
.+|..
T Consensus 73 v~V~a 77 (94)
T d1fnfa1 73 VSVYT 77 (94)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0054 Score=45.83 Aligned_cols=83 Identities=13% Similarity=0.146 Sum_probs=45.4
Q ss_pred CCCccEEEEec--CCCCCceEEEEEcCCCC----CCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecC
Q 046207 52 NAPEQVHITQG--DHDGRSVIVSWVTPDEK----YPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKR 121 (458)
Q Consensus 52 ~~p~~v~~~~~--~~~~~~~~i~W~t~~~~----~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 121 (458)
.+|..+.+..- +...+++.|+|..+... ... .++|....+........ .....++|.+
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~ 71 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFA------------GQQTEFKILS 71 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEEE------------ETCSEEEECC
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeecc------------ccccEEEECC
Confidence 36777776643 33447899999976421 112 34444444332221110 1123467899
Q ss_pred CCCCCEEEEEeCC----CC---ccceEEEECC
Q 046207 122 LKYDTKYFYQLGS----GN---ATRRFHFTTP 146 (458)
Q Consensus 122 L~p~t~Y~Y~v~~----g~---~~~~~~f~T~ 146 (458)
|+|+|.|.+||.. |. +|+...++|+
T Consensus 72 L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 72 LHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp --CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 9999999999875 42 3556677775
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0049 Score=46.17 Aligned_cols=82 Identities=13% Similarity=0.152 Sum_probs=51.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+++..-. .+++.|+|..+... ..-.|+|....+..... ... +-...++|+||+|+|.|.++
T Consensus 3 ~P~~l~~~~~t--~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~------~~~------~~~~~~~l~~L~p~t~Y~~~ 68 (102)
T d2cuha1 3 GPTQLRALNLT--EGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQA------ETP------GSAVDYPLHDLVLHTNYTAT 68 (102)
T ss_dssp SCEEEECCCCS--SSCEEEEEECCSSCCSEEEEEEECSSSCCEEE------EEE------TTCSEEEECSCCSSSEEEEE
T ss_pred CCCccEEEEeC--CCEEEEEEEeeeccceeeEEEEEeccccceee------eee------eeeeeEEEccEEeeEEEEEE
Confidence 67777776443 47999999876433 33567776654322111 111 11224679999999999999
Q ss_pred eCC----CCc-cceEEEECCCC
Q 046207 132 LGS----GNA-TRRFHFTTPPK 148 (458)
Q Consensus 132 v~~----g~~-~~~~~f~T~p~ 148 (458)
|.. |.+ .....|+|.+.
T Consensus 69 V~a~~~~~~s~~~~~~~~T~~~ 90 (102)
T d2cuha1 69 VRGLRGPNLTSPASITFTTGLE 90 (102)
T ss_dssp EEEEETTEECCCEEEEEESCCC
T ss_pred EEEEeCCCCcCCEEEEEECCCC
Confidence 875 222 12557888764
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.74 E-value=0.0038 Score=45.29 Aligned_cols=68 Identities=15% Similarity=0.258 Sum_probs=44.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+++..-.+ +++.|+|..+.... .-.|+|....... .. .... .-...++|++|+|+|.|.++
T Consensus 2 aP~~l~v~~~t~--~sv~v~W~~p~~~~~~Y~v~~~~~~~~~-~~-----~~~~------~~~~~~~~~~L~p~t~Y~v~ 67 (87)
T d1qr4a1 2 NPKDLEVSDPTE--TTLSLRWRRPVAKFDRYRLTYVSPSGKK-NE-----MEIP------VDSTSFILRGLDAGTEYTIS 67 (87)
T ss_dssp CCEEEEEESCCS--SEEEEEEECCSSCCSEEEEEEECTTCCE-EE-----EEEC------TTCSEEEEESCCSSCEEEEE
T ss_pred cCcCcEEEEecC--CEEEEEEECCCCCcceeEEEeecCCcce-eE-----EeCC------CCcCEEEECCCCcCCEEEEE
Confidence 688888775543 69999999765433 3477787654321 11 1111 11235689999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 68 V~a 70 (87)
T d1qr4a1 68 LVA 70 (87)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.73 E-value=0.0016 Score=50.08 Aligned_cols=88 Identities=14% Similarity=0.192 Sum_probs=52.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+...+...++++|+|.-+..... -.|+|+...+........ ....+-..++.|++|.|++.
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~--------~~~~~~~~~~~i~~L~~~t~ 77 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP--------EDTASTRSSFTVQDLKPFTE 77 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG--------GGGCSCCSEEEECSCCSSEE
T ss_pred CCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecccc--------ccccccccEEeeCCCccCcE
Confidence 367778777655555799999986532222 356676655433211110 11122335678999999999
Q ss_pred EEEEeCC----CC-----ccceEEEECCC
Q 046207 128 YFYQLGS----GN-----ATRRFHFTTPP 147 (458)
Q Consensus 128 Y~Y~v~~----g~-----~~~~~~f~T~p 147 (458)
|.+||.. |. ++....++|..
T Consensus 78 Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 78 YVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 9999953 32 23466777754
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.0046 Score=47.33 Aligned_cols=85 Identities=11% Similarity=0.146 Sum_probs=52.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC----------CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP----------NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKR 121 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 121 (458)
.+|..|+++..+ +++.|+|..+..... -.|+|............- . .......+.+.+
T Consensus 7 ~pP~nl~v~~~~---~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~ 74 (114)
T d2gysa2 7 PEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAIL---L------SNTSQATLGPEH 74 (114)
T ss_dssp CCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEE---E------ESSSEEEECTTT
T ss_pred CcCCCeEEEEeC---CEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEe---e------ccCceEEEEeCC
Confidence 378889887654 489999998743211 246666655432211110 0 011234568899
Q ss_pred CCCCCEEEEEeCC----C--------CccceEEEECCCC
Q 046207 122 LKYDTKYFYQLGS----G--------NATRRFHFTTPPK 148 (458)
Q Consensus 122 L~p~t~Y~Y~v~~----g--------~~~~~~~f~T~p~ 148 (458)
|.|+|.|..||.. | .+|+.-.|+|+|.
T Consensus 75 L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 75 LMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp CCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 9999999999865 2 2355778999873
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.0065 Score=44.57 Aligned_cols=82 Identities=17% Similarity=0.244 Sum_probs=50.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
.+|..+.+..-. .+++.|+|..+... ..-.|+|....+.. .. ... ......++|+||+|+|.|.+
T Consensus 3 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~-~~-----~~~------~~~~~~~~i~~L~p~t~Y~~ 68 (93)
T d2cuma1 3 EAPRDLEAKEVT--PRTALLTWTEPPVRPAGYLLSFHTPGGQT-QE-----ILL------PGGITSHQLLGLFPSTSYNA 68 (93)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEECTTSCE-EE-----EEE------CSSCSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEeC--CCEEEEEEEccccccccEEEEEEcccccc-EE-----EEE------CCCccEEEEeCccCCCEEEE
Confidence 367776666433 47999999877533 33567787654321 11 111 11123468999999999999
Q ss_pred EeCC----CCcc-ceEEEECCC
Q 046207 131 QLGS----GNAT-RRFHFTTPP 147 (458)
Q Consensus 131 ~v~~----g~~~-~~~~f~T~p 147 (458)
+|.. |.+. ....|+|..
T Consensus 69 ~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 69 RLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp EEEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEEeCCCCCCCEEEEEEeCC
Confidence 9875 3222 245677755
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.67 E-value=0.0031 Score=47.80 Aligned_cols=58 Identities=9% Similarity=-0.018 Sum_probs=37.4
Q ss_pred CceEEEEEcCCCCCC----CeEEEEecCCC-CceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 67 RSVIVSWVTPDEKYP----NVVTHWEANSK-RKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 67 ~~~~i~W~t~~~~~~----~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
+++.|+|..+..... ..|+|....+. .+..+.-. ..-....+|++|+|+|.|.+||..
T Consensus 22 ~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~----------~~~~~~~~l~~L~p~t~Y~frVra 84 (106)
T d1cd9b2 22 GCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL----------PSSKDQFELCGLHQAPVYTLQMRC 84 (106)
T ss_dssp SCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE----------ESCEEEEEECCCCSCSCEEEEEEE
T ss_pred CEEEEEEcCcccCCccceEEEEEEeeccccccceeeecc----------cCCceEEEEeccCCCeEEEEEEEE
Confidence 699999986643332 27888765443 33332211 112345678999999999999875
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.64 E-value=0.015 Score=50.81 Aligned_cols=190 Identities=15% Similarity=0.098 Sum_probs=104.4
Q ss_pred eEEEEEecCCCCCCcHHH----HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+||+++||. .+...... |..+.+ +.||||..|.++-.+. .- ... .+.++++ ..+-+ .+.|||=|
T Consensus 1 MkILfiGDI-vG~~Gr~~v~~~Lp~lk~--~~DfVIaNgENaa~G~-Gi-t~~---~~~~l~~---~GvDv-iT~GNH~w 68 (255)
T d1t70a_ 1 MRVLFIGDV-FGQPGRRVLQNHLPTIRP--QFDFVIVNMENSAGGF-GM-HRD---AARGALE---AGAGC-LTLGNHAW 68 (255)
T ss_dssp CEEEEECCB-BHHHHHHHHHHHHHHHGG--GCSEEEEECTBTTTTS-SC-CHH---HHHHHHH---HTCSE-EECCTTTT
T ss_pred CeEEEEecC-CCHHHHHHHHHHhHHHHh--hCCEEEECCccCCCCc-CC-CHH---HHHHHHH---cCCcE-EEcCchhh
Confidence 589999998 33222333 344433 5799999999987643 11 122 2223222 23444 48999987
Q ss_pred CCCCCCCCcccCc-ccceeeccccCCC--CCCCCceEEEEcCeEEEEEecC--CCcCCCChHHHHHHHHHhccccCCCCC
Q 046207 231 DYAPEIGENVPFK-PYTHRYHVPYRAS--QSTSPLWYSIKRASAYIIVLSS--YSAYGKYTPQYAWLEKELPKVNRAETP 305 (458)
Q Consensus 231 ~~~~~~~~~~~~~-~~~~~f~~P~~~~--~~~~~~~ys~~~g~~~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 305 (458)
..... ..|- ....+..-|.+-+ ...+..|+.++..+.++.+++- +........-+.-+++.|++ .+.+
T Consensus 69 dkkei----~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~---~~~~ 141 (255)
T d1t70a_ 69 HHKDI----YPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLER---DDLG 141 (255)
T ss_dssp SSTTH----HHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTC---SSCC
T ss_pred cchhH----HHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhh---cCCC
Confidence 53210 1111 1111232343322 2345667888877756655553 33323333345556777765 4566
Q ss_pred eEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEe
Q 046207 306 WLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTI 385 (458)
Q Consensus 306 ~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~ 385 (458)
.+||=+|.=.-+ . +.-.-.+-.-+|.+|+-=|+|.-.--.++ -++|+.|++-
T Consensus 142 ~i~VDfHaEaTS-----------E-K~A~g~~ldGrvsav~GTHTHV~TaD~rI----------------lp~GTay~TD 193 (255)
T d1t70a_ 142 TVFVDFHAEATS-----------E-KEAMGWHLAGRVAAVIGTHTHVPTADTRI----------------LKGGTAYQTD 193 (255)
T ss_dssp EEEEEEECSCHH-----------H-HHHHHHHHTTSSSEEEEESSCSCBSCCEE----------------ETTTEEEESC
T ss_pred eEEEEccchhHH-----------H-HHHHHhhhcCcEEEEEecCcccccccceE----------------ecCCcEEEec
Confidence 788888853211 1 12223455678999999999986443322 1567777764
Q ss_pred -CCCCCC
Q 046207 386 -GDGGNI 391 (458)
Q Consensus 386 -G~gG~~ 391 (458)
|.-|..
T Consensus 194 vGMtG~~ 200 (255)
T d1t70a_ 194 AGFTGPH 200 (255)
T ss_dssp CCCBEES
T ss_pred Cccccch
Confidence 555554
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0034 Score=47.39 Aligned_cols=60 Identities=12% Similarity=0.009 Sum_probs=37.6
Q ss_pred CCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 66 GRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 66 ~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
.+++.|+|.-+.... .-.|+|....+......... ...-....+|++|+|+|.|.+||..
T Consensus 20 ~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~frVra 83 (105)
T d2d9qb2 20 AGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP---------LPLEALQYELCGLLPATAYTLQIRC 83 (105)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE---------ECSCEEEEEECSCCSCCCEEEEEEE
T ss_pred CCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeec---------ccCCcceeEEecccCCeEEEEEEEE
Confidence 369999998654222 23677776554322221111 1223455789999999999999864
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.62 E-value=0.002 Score=48.19 Aligned_cols=70 Identities=14% Similarity=0.200 Sum_probs=44.4
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+....+ ++++|+|.-+... ..-.|+|....+..+..+.. .......++++||+|++.
T Consensus 4 ~P~~~~v~~~~~--~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~----------~~~~~~~~~v~~L~~~~~ 71 (98)
T d1x5ya1 4 APQHLTVEDVTD--TTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGAR 71 (98)
T ss_dssp CCEEEEEEEECS--SEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTCC
T ss_pred CCcCcEEEEccC--CEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeee----------ecCceeEEEECCCcCCeE
Confidence 677777765544 6999999865322 12467777765543322110 011112457899999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.|||..
T Consensus 72 Y~frV~A 78 (98)
T d1x5ya1 72 ILFRVVG 78 (98)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999986
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.61 E-value=0.0053 Score=45.75 Aligned_cols=73 Identities=14% Similarity=0.249 Sum_probs=40.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC-------CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP-------NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~-------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 124 (458)
.+|..|.+.... .+++.|+|..+..... -.|+|....+.......-. ....-...+++.+|+|
T Consensus 3 ~~P~~l~v~~~~--~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p 72 (101)
T d1iarb2 3 RAPGNLTVHTNV--SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNV--------TYLEPSLRIAASTLKS 72 (101)
T ss_dssp CCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEE--------CSSCCEEEECC-----
T ss_pred ccCCcCEEEEEe--CCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeee--------ccCccceEEEECCCCC
Confidence 468777776554 3699999998743321 2677776655433221100 0122345678999999
Q ss_pred CCEEEEEeCC
Q 046207 125 DTKYFYQLGS 134 (458)
Q Consensus 125 ~t~Y~Y~v~~ 134 (458)
+|.|.+||..
T Consensus 73 ~t~Y~~rVrA 82 (101)
T d1iarb2 73 GISYRARVRA 82 (101)
T ss_dssp CCCEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999975
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.60 E-value=0.017 Score=50.18 Aligned_cols=190 Identities=14% Similarity=0.146 Sum_probs=103.3
Q ss_pred eEEEEEecCCCCCCcHHH----HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+||+++||. .+....+. |.++.+ +.||||..|.++-.+. .- .....+ ++++ ..+-+ .+.|||=|
T Consensus 1 MkiLfiGDI-vG~~Gr~~v~~~Lp~Lk~--~~DfVIaNgENaa~G~-Gi-t~k~~~---~L~~---~GVDv-IT~GNH~w 68 (252)
T d2z06a1 1 MRVLFIGDV-MAEPGLRAVGLHLPDIRD--RYDLVIANGENAARGK-GL-DRRSYR---LLRE---AGVDL-VSLGNHAW 68 (252)
T ss_dssp CEEEEECCB-CHHHHHHHHHHHHHHHGG--GCSEEEEECTTTTTTS-SC-CHHHHH---HHHH---HTCCE-EECCTTTT
T ss_pred CeEEEEecc-CCHHHHHHHHHHhHHHHh--hCCEEEEeeeccCCCc-CC-CHHHHH---HHHH---hCCCE-EEcCcccc
Confidence 589999998 33222333 334433 5799999999986543 11 122222 2221 23443 48999998
Q ss_pred CCCCCCCCcccCcccceeeccccCCC-CCCCCceEEEEcCeEEEEEecC--CCcCCCChHHHHHHHHHhccccCCCCCeE
Q 046207 231 DYAPEIGENVPFKPYTHRYHVPYRAS-QSTSPLWYSIKRASAYIIVLSS--YSAYGKYTPQYAWLEKELPKVNRAETPWL 307 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~~P~~~~-~~~~~~~ys~~~g~~~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 307 (458)
+.... ..|... ++.--|.+-+ +..+..|+.++.++.++.++|- .......+.-+.-+++.|++ .+.+.+
T Consensus 69 dkkei----~~~i~~-~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~---~~~~~i 140 (252)
T d2z06a1 69 DHKEV----YALLES-EPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEE---EKADYV 140 (252)
T ss_dssp SCTTH----HHHHHH-SSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHH---CCCSEE
T ss_pred cchhh----hhhhcc-ccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhh---cCccEE
Confidence 53211 111111 1222343332 2234567888877766666654 22222222333444454544 456778
Q ss_pred EEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEe-C
Q 046207 308 IVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTI-G 386 (458)
Q Consensus 308 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~-G 386 (458)
||=+|.=.-+ . +.-.-.+-.-+|.+|+-=|+|.-..-.++ -++|+.|++- |
T Consensus 141 ~VDfHaEaTS-----------E-K~A~g~~ldGrvsavvGTHTHV~TaD~rI----------------Lp~GTayiTDvG 192 (252)
T d2z06a1 141 LVEVHAEATS-----------E-KMALAHYLDGRASAVLGTHTHVPTLDATR----------------LPKGTLYQTDVG 192 (252)
T ss_dssp EEEEECSCHH-----------H-HHHHHHHHBTTBSEEEEESSCSCBSCCEE----------------CTTSCEEESCCC
T ss_pred EEEcccchhh-----------h-heeeeEecCCCEEEEEecCccccccccEE----------------ecCCeEEEccCc
Confidence 8888853221 1 12223455668999999999985433221 2677888864 6
Q ss_pred CCCCCC
Q 046207 387 DGGNIE 392 (458)
Q Consensus 387 ~gG~~~ 392 (458)
.-|...
T Consensus 193 M~G~~~ 198 (252)
T d2z06a1 193 MTGTYH 198 (252)
T ss_dssp CBEESS
T ss_pred cccchh
Confidence 666543
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.56 E-value=0.0045 Score=45.65 Aligned_cols=70 Identities=10% Similarity=0.026 Sum_probs=43.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC--CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK--YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|..+.+..-.+ +++.|+|..+... ..-.|+|....+...... .. ...-...++|+||+|+|.|.+
T Consensus 8 ~P~~l~v~~~t~--~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~------~~~~~t~~~i~~L~p~t~Y~~ 75 (95)
T d2fnba_ 8 QLTDLSFVDITD--SSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFE----DF------VDSSVGYYTVTGLEPGIDYDI 75 (95)
T ss_dssp CCTTCEEECCCS--SCEEEECCCCCCSSCCEEEEEEEEETSCCEEEE----EE------CCSSCSEEEECCCCTTSEEEE
T ss_pred cCCCeEEEEEcC--CEEEEEEEecCCceEEeEEEEEEEeeccceEEE----EE------eCCCCeEEEEecccCCEEEEE
Confidence 577777765543 6999999765421 223577776554322111 00 011223568999999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
+|..
T Consensus 76 ~V~a 79 (95)
T d2fnba_ 76 SVIT 79 (95)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.56 E-value=0.0064 Score=45.64 Aligned_cols=72 Identities=18% Similarity=0.190 Sum_probs=46.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC--CCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE--KYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~--~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..|.++.-....+++.|+|..+.. ... -.|+|............ . .......+|.+|+|+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~-------~----~~~~~~~~i~~L~p~ 71 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-------V----KDLQHHCVIHDAWSG 71 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-------C----GGGCSEEEESSCCTT
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeec-------c----ccceEEEEECCCCCC
Confidence 368888887755444789999997632 111 35667665544332211 1 112235679999999
Q ss_pred CEEEEEeCC
Q 046207 126 TKYFYQLGS 134 (458)
Q Consensus 126 t~Y~Y~v~~ 134 (458)
+.|.+||..
T Consensus 72 t~Y~~rVra 80 (104)
T d1n26a3 72 LRHVVQLRA 80 (104)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999975
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.55 E-value=0.0036 Score=46.77 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=43.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+..+. +++.|+|.-+...+ .-.|+|............... .. + ...+.+.+|+|+|.
T Consensus 7 ~~P~~~~v~~~~---~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~--~-----~~~~~~~~L~p~t~ 74 (100)
T d1cfba1 7 NAPKLTGITCQA---DKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK--VP--N-----TDSSFVVQMSPWAN 74 (100)
T ss_dssp CCCEEEEEEECS---SEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE--EE--T-----TCSEEEEECCSSEE
T ss_pred CcCcCcEEEEcC---CEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeee--cC--C-----ceEEEEecCCCCCE
Confidence 478888877543 58999998654322 236677765543332211111 00 1 12246779999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.+||..
T Consensus 75 Y~frV~A 81 (100)
T d1cfba1 75 YTFRVIA 81 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.54 E-value=0.0019 Score=48.25 Aligned_cols=82 Identities=15% Similarity=0.082 Sum_probs=46.9
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC--------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY--------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLK 123 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 123 (458)
.+|..|.+..-.. +++.|+|..+.... .-.|+|............ .. .. ...++|+||+
T Consensus 3 ~pP~~v~~~~~s~--tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----~~----~~--~~~~~i~~L~ 69 (100)
T d1x5ja1 3 MPPVGVQASILSH--DTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----AN----AT--TLSYLVTGLK 69 (100)
T ss_dssp CCCEEEEEEEEET--TEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEE-----CC----BC--SSEEEEESCC
T ss_pred CCCcCeEEEEecC--CEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEe-----cC----CC--ccEEEECCCC
Confidence 3687777765554 79999998653111 124555554433221111 00 11 1246789999
Q ss_pred CCCEEEEEeCC----C--CccceEEEECC
Q 046207 124 YDTKYFYQLGS----G--NATRRFHFTTP 146 (458)
Q Consensus 124 p~t~Y~Y~v~~----g--~~~~~~~f~T~ 146 (458)
|+|.|.+||.. | ..|..-.++|.
T Consensus 70 p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 70 PNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred CCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 99999999875 2 33444455553
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.54 E-value=0.0028 Score=47.98 Aligned_cols=86 Identities=17% Similarity=0.238 Sum_probs=50.6
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..+.+...+ .+++.|.|..+.... .-.|+|.............. . ........++.|++|+|+
T Consensus 10 ~pP~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~i~~L~p~ 81 (109)
T d1va9a1 10 GPPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV--E----MKATGDSEVYTLDNLKKF 81 (109)
T ss_dssp SCCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC--B----CCCCSSEEEEEEESCCSS
T ss_pred CCCcCcEEEEec--CCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeee--E----EecCCCeeEEEECCCCcc
Confidence 368888877554 379999999763221 12567766544322110000 0 011233556789999999
Q ss_pred CEEEEEeCC------CCccceEEEEC
Q 046207 126 TKYFYQLGS------GNATRRFHFTT 145 (458)
Q Consensus 126 t~Y~Y~v~~------g~~~~~~~f~T 145 (458)
|.|.+||.. |..|..-.|+|
T Consensus 82 t~Y~~~V~a~n~~G~g~~S~~v~~~T 107 (109)
T d1va9a1 82 AQYGVVVQAFNRAGTGPSSSEINATT 107 (109)
T ss_dssp CCEEEEEEEEETTEECCCCCCEECCC
T ss_pred eEEEEEEEEEcCCcCCCCCCCEEEEc
Confidence 999999875 33344445555
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.53 E-value=0.0023 Score=48.76 Aligned_cols=70 Identities=16% Similarity=0.211 Sum_probs=43.6
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+... .++++|+|.-+.... .-.|+|....+. +...... . ......++|++|+|++.
T Consensus 9 sPP~~~~~~~t---~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~~~~~---~------~~~~~~~~i~~L~p~t~ 75 (108)
T d1v5ja_ 9 SPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEVLDPA---V------AGTETELLVPGLIKDVL 75 (108)
T ss_dssp CCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEEEEEE---E------CSSCCEEECCCCCTTSC
T ss_pred CcCCCeEEEEc---CCEEEEEEEecccCCCceeEEEEEeeeeeee-eeecccc---c------cceeeeEEEEeccCCcE
Confidence 46777766543 268999998654222 236777765443 2221111 1 11234567999999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.|||..
T Consensus 76 Y~~rV~A 82 (108)
T d1v5ja_ 76 YEFRLVA 82 (108)
T ss_dssp EECCBEE
T ss_pred EEEEEEE
Confidence 9999885
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.52 E-value=0.0036 Score=46.45 Aligned_cols=69 Identities=13% Similarity=0.240 Sum_probs=46.8
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC--CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK--YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
.+|+.+.+..... +++.|+|..+... ..-.|+|....+....... . ......+|.+|.|+|.|.
T Consensus 4 ~~P~nl~v~~~~~--~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~-----------~~~~~~~~~~L~p~t~Y~ 69 (95)
T d2b5ic1 4 WAPENLTLHKLSE--SQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-V-----------DYRHKFSLPSVDGQKRYT 69 (95)
T ss_dssp CCCEEEEEEEEET--TEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-E-----------CSSCEEEECSCCTTSCEE
T ss_pred cCCCCCEEEEEeC--CEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-e-----------cccceeEcCCCCCCCEEE
Confidence 4788888876554 6999999976532 2347788876654332211 1 112357889999999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
+||..
T Consensus 70 frVRa 74 (95)
T d2b5ic1 70 FRVRS 74 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0058 Score=46.04 Aligned_cols=81 Identities=15% Similarity=0.274 Sum_probs=47.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCCCeEEE----EecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTH----WEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+..... ++++|+|.-+...+.....| .............. .-.....+.+|+|+|.|
T Consensus 13 ~P~~~~~~~~~~--~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~Y 79 (105)
T d1x3da1 13 IPNPPRIANRTK--NSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM-----------GSQKQFKITKLSPAMGC 79 (105)
T ss_dssp CCCCCEEEEEET--TEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE-----------ESCSEEEEESCCTTCEE
T ss_pred CCCCCEEEEccC--CEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEec-----------CCccEEEecCCcCCcEE
Confidence 577777766543 69999998765433343344 33322221111111 01124577899999999
Q ss_pred EEEeCC----C--CccceEEEECC
Q 046207 129 FYQLGS----G--NATRRFHFTTP 146 (458)
Q Consensus 129 ~Y~v~~----g--~~~~~~~f~T~ 146 (458)
.+||.. | ..|+...|+|.
T Consensus 80 ~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 80 KFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEECCEEESSCBCCCCCCEEEECS
T ss_pred EEEEEEECCCeEcCCCCcEEEECC
Confidence 999985 3 34556677764
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0046 Score=45.44 Aligned_cols=82 Identities=16% Similarity=0.190 Sum_probs=49.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.+.--.. +++.|+|..+... ....++|....+.... .. ..........+|+||+|+|.|.++
T Consensus 4 ~P~~l~v~~vt~--~sv~l~W~~p~~~~~~y~i~~~~~~~~~~~-------~~---~~~~~~~~~~~i~~L~p~t~Y~~~ 71 (94)
T d1j8ka_ 4 RPKGLAFTDVDV--DSIKIAWESPQGQVSRYRVTYSSPEDGIHE-------LF---PAPDGEEDTAELQGLRPGSEYTVS 71 (94)
T ss_dssp CCCCCEEEEEET--TEEEEECCCCSSCCSCEEEEEEETTTEEEE-------EC---CCCCSSCCEEEECSCCCCSEEEEE
T ss_pred CCCCCEEEEecC--CEEEEEEeCCCccccceEEEEEeecCCCce-------EE---EecCCCccEEEECCCCCCCEEEEE
Confidence 677787775443 6999999766432 3346777766542111 00 011223345789999999999999
Q ss_pred eCC----CCccc-eEEEECC
Q 046207 132 LGS----GNATR-RFHFTTP 146 (458)
Q Consensus 132 v~~----g~~~~-~~~f~T~ 146 (458)
|.. |.+.+ ...++|.
T Consensus 72 V~a~~~~g~S~p~~~~~~T~ 91 (94)
T d1j8ka_ 72 VVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp EEECSSSCCCCCEEEEEECC
T ss_pred EEEEeCCCCcCCEEEEEEEC
Confidence 875 33222 4556663
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=96.48 E-value=0.0091 Score=52.86 Aligned_cols=193 Identities=16% Similarity=0.103 Sum_probs=103.3
Q ss_pred CCeEEEEEecCCCCCCcHH----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCc
Q 046207 153 VPYIFGIIGDLGQTYDSNQ----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~~~----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 228 (458)
..+||+++||. .+..... .|..+.++.++||||..|-++-.+. .- ... .+.++++ ..+-+ .+.|||
T Consensus 3 ~~MkILfiGDI-vG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~-Gi-t~k---~~~eL~~---~GvDv-IT~GNH 72 (281)
T d1t71a_ 3 NSIKFIFLGDV-YGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGK-GL-SLK---HYEFLKE---AGVNY-ITMGNH 72 (281)
T ss_dssp CCCEEEEECEE-BHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTS-SC-CHH---HHHHHHH---HTCCE-EECCTT
T ss_pred ccceEEEEEcc-CCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCc-CC-CHH---HHHHHHH---hCCcE-EEcCch
Confidence 46899999998 3322233 3445555559999999999987643 11 122 2222221 23443 489999
Q ss_pred ccCCCCCCCCcccCcccceeeccccCC----C-CCCCCceEEEEcCeEEEEEecCC--CcCCC--ChHHHHHHHHHhccc
Q 046207 229 ELDYAPEIGENVPFKPYTHRYHVPYRA----S-QSTSPLWYSIKRASAYIIVLSSY--SAYGK--YTPQYAWLEKELPKV 299 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~f~~P~~~----~-~~~~~~~ys~~~g~~~fi~Lds~--~~~~~--~~~Q~~WL~~~L~~~ 299 (458)
=|..... ..+-.-..+.--|.+- + ...+..|..++.++..+.+++-- ..... ......-+++.+.+
T Consensus 73 ~wd~kei----~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~- 147 (281)
T d1t71a_ 73 TWFQKLD----LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK- 147 (281)
T ss_dssp TTCCGGG----HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT-
T ss_pred hhhchhh----HHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc-
Confidence 8753211 0111111222233332 1 22345688888766555555542 21111 12233444444444
Q ss_pred cCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCC
Q 046207 300 NRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSA 379 (458)
Q Consensus 300 ~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g 379 (458)
.+.+.+||=+|.=.-+ + +.-.-.+-.-+|.+|+-=|+|.-.--.++ -++|
T Consensus 148 --~~~d~i~VDfHaEATS---------E---K~A~g~~lDGrvsaVvGTHTHV~TaD~rI----------------Lp~G 197 (281)
T d1t71a_ 148 --RDCDLHIVDFHAETTS---------E---KNAFCMAFDGYVTTIFGTHTHVPSADLRI----------------TPKG 197 (281)
T ss_dssp --CCCSEEEEEEECSCHH---------H---HHHHHHHHTTTSSEEEEESSSSCCTTCEE----------------CTTS
T ss_pred --cCCCeEEEEeccchhh---------h---hhhheeeeCCcEEEEEecCcccccCcccc----------------ccCC
Confidence 5567889988853221 1 11223455678999999999985433222 2567
Q ss_pred CeEEEe-CCCCC
Q 046207 380 PVYLTI-GDGGN 390 (458)
Q Consensus 380 ~~yiv~-G~gG~ 390 (458)
+-|++- |.-|.
T Consensus 198 TAyiTDvGMtG~ 209 (281)
T d1t71a_ 198 SAYITDVGMCGP 209 (281)
T ss_dssp CEEESCCCEEBC
T ss_pred eEEEecCccccC
Confidence 778754 44443
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.44 E-value=0.0057 Score=46.50 Aligned_cols=72 Identities=15% Similarity=0.174 Sum_probs=41.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.--. .+++.|+|.-....+ .-.|+|.............. .. ......+++++|+|+|.|
T Consensus 13 ~P~~~~v~~~~--~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~--~~------~~~~~~~~v~~L~p~t~Y 82 (108)
T d1x4za1 13 APDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--AI------PPSRLSVEITGLEKGISY 82 (108)
T ss_dssp CCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--EE------CTTCCEEEEESCCTTCEE
T ss_pred cCCCCEEEEcc--CCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEE--ee------cCCccEEEECCCCCCCEE
Confidence 55666665443 369999995332212 23567776544322211111 00 112234678999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.|||..
T Consensus 83 ~frV~A 88 (108)
T d1x4za1 83 KFRVRA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.37 E-value=0.0016 Score=50.82 Aligned_cols=88 Identities=22% Similarity=0.306 Sum_probs=51.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC--C----CCeEEEEecCCCC---ceEEEEEEEEEEecccccceEEEEEecCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK--Y----PNVVTHWEANSKR---KHKTHSIIKTYRYFNYSSGYIHHATIKRLK 123 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~--~----~~~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 123 (458)
+|..|.+..-.+ +++.|+|..+... . ...++|....... ..........+. .-..+++|.+|+
T Consensus 17 ~P~~v~v~~~~~--~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~L~ 88 (125)
T d1uena_ 17 APGNVRVNVVNS--TLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ------GSKTHGMLPGLE 88 (125)
T ss_dssp CCSSCEEEEEET--TEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE------SSCSEEEEESCC
T ss_pred CCcccEEEEecC--CEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeC------CCccEEEECCCC
Confidence 678888776554 6999999765311 1 1234444332211 111111111111 123468899999
Q ss_pred CCCEEEEEeCC----C--CccceEEEECCCC
Q 046207 124 YDTKYFYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 124 p~t~Y~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
|+|.|.+||.. | ..+....|+|.+.
T Consensus 89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 99999999875 3 3345778999763
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.011 Score=44.65 Aligned_cols=70 Identities=17% Similarity=0.141 Sum_probs=44.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
+|..+.+..-....+++.|+|..+.... .-.++|....+.....+.. .-....+|.+|+|+
T Consensus 10 PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~~~ 77 (109)
T d1uc6a_ 10 PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL------------SNGTAHTITDAYAG 77 (109)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE------------SSCSEEEETTCCSS
T ss_pred CCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEecc------------CCceeEEeCCCCCC
Confidence 6878888765444479999999864221 1245666555433322111 11224678999999
Q ss_pred CEEEEEeCC
Q 046207 126 TKYFYQLGS 134 (458)
Q Consensus 126 t~Y~Y~v~~ 134 (458)
|.|.+||..
T Consensus 78 t~Y~~rVrA 86 (109)
T d1uc6a_ 78 KEYIIQVAA 86 (109)
T ss_dssp SCEEEEEEC
T ss_pred CEEEEEEEE
Confidence 999999975
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.0028 Score=48.04 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=34.0
Q ss_pred CceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 67 RSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 67 ~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
+++.|+|..+...+ .-.|+|.............. .-.....++||+|+|.|.+||..
T Consensus 26 ~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~rV~A 87 (107)
T d2crma1 26 HSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS-----------GATREHLCDRLNPGCFYRLRVYC 87 (107)
T ss_dssp TEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC-----------SSCSEEEECSCCTTSCEEEEEEE
T ss_pred CEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEeec-----------CCccEEEEeccCCCCEEEEEEEE
Confidence 69999998654222 12555554443332221111 11123578999999999999975
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.31 E-value=0.0022 Score=47.97 Aligned_cols=77 Identities=16% Similarity=0.181 Sum_probs=44.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCCCceEE--EEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSKRKHKT--HSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
..|+.+++.--.. +++.|+|..+... ....|+|........... ......... .+-....+|.+|+|+|+|
T Consensus 5 p~~~~l~v~~~t~--~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~L~p~t~Y 78 (101)
T d2cuia1 5 PRLSQLSVTDVTT--SSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMV----PGTRHSAVLRDLRSGTLY 78 (101)
T ss_dssp CCCCCCEEESCCS--SCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEE----ETTCCEEEECSCCTTCEE
T ss_pred cCCCCcEEEEECC--CEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEeec----ccceeEEEeCCCCcCCEE
Confidence 3567777776543 6999999655322 234777876543221110 001111110 122344578999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.++|..
T Consensus 79 ~~~V~a 84 (101)
T d2cuia1 79 SLTLYG 84 (101)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.0052 Score=46.63 Aligned_cols=76 Identities=13% Similarity=0.074 Sum_probs=42.9
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC----CeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP----NVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+..-. .++++|+|.-+...+. ..|+|.............. .... .........|+||+|++.
T Consensus 12 ~~P~~~~~~~~~--~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~v~~L~p~t~ 84 (111)
T d1wisa1 12 GPPTNLGISNIG--PRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI-HQLS----NEPDARSMEVPDLNPFTC 84 (111)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE-EEEE----SCTTCSEEEECSCCTTSE
T ss_pred cCCCCCEEEEcC--CCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeee-eeee----cccceeEEEeCCCCCCCE
Confidence 368787776433 3799999986542222 2556655433222110101 1111 112223467899999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.+||..
T Consensus 85 Y~frV~A 91 (111)
T d1wisa1 85 YSFRMRQ 91 (111)
T ss_dssp ECCCCEE
T ss_pred EEEEEEE
Confidence 9999875
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.22 E-value=0.004 Score=48.18 Aligned_cols=84 Identities=21% Similarity=0.325 Sum_probs=49.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CC-C----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YP-N----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~-~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|..|.+..... +++.|+|..+... .. . .|+|....+. .. ... .........+.|++|+|+|
T Consensus 14 ~P~~v~~~~~~~--~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~~--~~~--~~~~~~~~~~~i~~L~p~t 81 (119)
T d1x5ha1 14 APQNLSLEVRNS--KSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SD--VTE--TLVSGTQLSQLIEGLDRGT 81 (119)
T ss_dssp CCEEEEEECCSS--SEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EE--EEC--CBCCTTCCEEEEECCCSSC
T ss_pred CCcCeEEEEecC--cEEEEEEEcccccCCCCCEEEEEEEEeecccc------cc--eee--eecCCCccEEEeCCCCCCC
Confidence 688887775543 6999999865321 11 2 2344443221 00 000 0012223567899999999
Q ss_pred EEEEEeCC----C--CccceEEEECCCC
Q 046207 127 KYFYQLGS----G--NATRRFHFTTPPK 148 (458)
Q Consensus 127 ~Y~Y~v~~----g--~~~~~~~f~T~p~ 148 (458)
.|.+||.. | ..|....|+|.+.
T Consensus 82 ~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 82 EYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 99999874 3 3455778999753
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.20 E-value=0.012 Score=42.39 Aligned_cols=68 Identities=13% Similarity=0.204 Sum_probs=45.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC-CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY-PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
+|..+.++.-.. +++.|+|..+...- .-.|+|....+...... .. .-.-++.|+||+|+|.|.++
T Consensus 3 ~P~nl~v~~~~~--~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~------~~------~~~~~~~~~~L~p~t~Y~v~ 68 (86)
T d1tdqa3 3 SPRDLMVTASSE--TSISLIWTKASGPIDHYRITFTPSSGISSEVT------VP------RDRTSYTLTDLEPGAEYIIS 68 (86)
T ss_dssp CCEEEEEEEECS--SCEEEEEECCCSCCSEEEEEEECSSSCCEEEE------EE------SSCSEEEECCCCTTCCEEEE
T ss_pred cCCCCEEEEecC--CEEEEEEeCCCCCccceEEEEecccccceEEE------eC------CCccEEEECCCccccEEEEE
Confidence 677888876543 69999998875332 34778876554322111 11 11224789999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 69 V~a 71 (86)
T d1tdqa3 69 ITA 71 (86)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.14 E-value=0.0099 Score=45.62 Aligned_cols=72 Identities=17% Similarity=0.266 Sum_probs=42.8
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+..-.+ +++.|+|..+.... .-.|+|............ ... ........|++|+|+|.
T Consensus 22 ~~P~~~~~~~~~~--~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~---~~~------~~~~~~~~i~~L~p~t~ 90 (117)
T d1wfoa1 22 GPPMGILFPEVRT--TSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV---EVL------APSARQYTATGLKPESV 90 (117)
T ss_dssp CCCCCCEEEEECS--SEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE---EEE------CTTCCEEEEESCCSSSE
T ss_pred cCCCCcEEEEecC--CEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeE---Eec------CCceEEEEECCCCCCCE
Confidence 3677777765543 69999997654322 235677665443221110 011 01122456899999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.+||..
T Consensus 91 Y~~~V~A 97 (117)
T d1wfoa1 91 YLFRITA 97 (117)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.0035 Score=47.59 Aligned_cols=70 Identities=17% Similarity=0.181 Sum_probs=42.9
Q ss_pred CCccEEEEecCCC----CCceEEEEEcCCCCC--------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEec
Q 046207 53 APEQVHITQGDHD----GRSVIVSWVTPDEKY--------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIK 120 (458)
Q Consensus 53 ~p~~v~~~~~~~~----~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (458)
+|..+.++..... ..++.|+|.-+.... .-.|+|+...+..+..... ....+++|+
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~~------------~~~~~~~i~ 70 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP------------ILTTSVPVY 70 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC------------BSSSEEEEE
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeeee------------cccceEEEC
Confidence 6777777653321 247999998764211 1356677665544332211 111357899
Q ss_pred CCCCCCEEEEEeCC
Q 046207 121 RLKYDTKYFYQLGS 134 (458)
Q Consensus 121 gL~p~t~Y~Y~v~~ 134 (458)
+|+|+|.|.+||..
T Consensus 71 ~L~~~t~Y~frVRa 84 (106)
T d1axib2 71 SLKVDKEYEVRVRS 84 (106)
T ss_dssp EEETTSCEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999964
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.0043 Score=46.59 Aligned_cols=70 Identities=17% Similarity=0.221 Sum_probs=40.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
+|..+.+..-.+ ++++|+|..+... ....++|............. ........+++||+|+|.
T Consensus 5 pP~~p~~~~~t~--~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~ 72 (104)
T d1bpva_ 5 PPGKPVPLNITR--HTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTEDAA 72 (104)
T ss_dssp CCCCCEEEEEET--TEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCSSCC
T ss_pred CCCCCEEEEecC--CEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe----------eccceeEEEEcCCCCCCE
Confidence 344444443333 6999999865322 22466676655433322110 111223467899999999
Q ss_pred EEEEeCC
Q 046207 128 YFYQLGS 134 (458)
Q Consensus 128 Y~Y~v~~ 134 (458)
|.|||..
T Consensus 73 Y~frV~A 79 (104)
T d1bpva_ 73 YEFRVIA 79 (104)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.06 E-value=0.018 Score=44.60 Aligned_cols=94 Identities=13% Similarity=0.160 Sum_probs=52.2
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCC----CCCeEEEEecCCCCceEE--EEEEEEEEeccc---ccceEEEEEecCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEK----YPNVVTHWEANSKRKHKT--HSIIKTYRYFNY---SSGYIHHATIKRL 122 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~l~gL 122 (458)
.+|..|.++.+ .+++.|+|.-+... ..-.|+|........... ......+..... ........+|.+|
T Consensus 9 ~aP~~v~v~~~---~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L 85 (123)
T d1wfta_ 9 GAPSTVRISKN---VDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDY 85 (123)
T ss_dssp CCCEEEEEEEC---SSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBC
T ss_pred cCCcccEEEeC---CCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCC
Confidence 37888888753 26899999965432 234677766544321100 000001110000 0000112367899
Q ss_pred CCCCEEEEEeCC------CCccceEEEECCCC
Q 046207 123 KYDTKYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 123 ~p~t~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
+|+|.|.+||.. |..+++..|+|...
T Consensus 86 ~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~ 117 (123)
T d1wfta_ 86 TSRPAIVFRISAKNEKGYGPATQIRWLQGNSK 117 (123)
T ss_dssp SSSCEEEEEEEEBSSSSBCCCEEEEEECCSCC
T ss_pred CCCCEEEEEEEEecCCcCCCCCCcEEEEecCC
Confidence 999999999875 44566778888654
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.03 E-value=0.0048 Score=47.99 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=45.9
Q ss_pred CCceEEEEEcCCCCC---CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC------CC
Q 046207 66 GRSVIVSWVTPDEKY---PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS------GN 136 (458)
Q Consensus 66 ~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------g~ 136 (458)
.+++.|+|.-+.... .-.|.|......... +...... ........++|.||+|+|.|.+||.. |.
T Consensus 29 ~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~---~~~~~~~---v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~ 102 (120)
T d1ujta_ 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQAT---SSWQNLD---AKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTT---TCCEEEE---CCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred CCeEEEEecCCCCCCcEEEEEEEeeecccCCCC---cceEEEE---eccCceeEEEECCCCCCCEEEEEEEEEeCCcCcC
Confidence 379999998764222 246778765432110 0000000 01122345678999999999999875 34
Q ss_pred ccceEEEECCCC
Q 046207 137 ATRRFHFTTPPK 148 (458)
Q Consensus 137 ~~~~~~f~T~p~ 148 (458)
.|+.-.++|++.
T Consensus 103 ~S~~~~~~T~e~ 114 (120)
T d1ujta_ 103 DSESKTVRTTEE 114 (120)
T ss_dssp CCCCEEEEECSS
T ss_pred CCCCEEEEeCCC
Confidence 556778888874
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.014 Score=45.31 Aligned_cols=86 Identities=17% Similarity=0.228 Sum_probs=49.3
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+.+....+ +++.|.|.-+...... .++|............-.. ........+.+|+|++.
T Consensus 18 ~~P~~~~v~~~~~--~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~L~p~t~ 86 (127)
T d1ueya_ 18 NPPFDLELTDQLD--KSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE---------VSGTQTTAQLNLSPYVN 86 (127)
T ss_dssp CCCEEEEEECCSS--SCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE---------EESSCCEEEECCCTTCE
T ss_pred cCCCCcEEEEecC--CeEEEEEeCCcccccceEeeeeeeccccccceeEEEEee---------cCCceEEEECCCccCCE
Confidence 3688888776554 6999999866433322 4445444333222111110 01123356789999999
Q ss_pred EEEEeCC----CCc--c-ceEEEECCCC
Q 046207 128 YFYQLGS----GNA--T-RRFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~----g~~--~-~~~~f~T~p~ 148 (458)
|.+||.. |.+ + ....++|.+.
T Consensus 87 Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 87 YSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp ECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 9999875 322 2 2345677654
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.93 E-value=0.02 Score=41.80 Aligned_cols=57 Identities=19% Similarity=0.360 Sum_probs=36.3
Q ss_pred CceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 67 RSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 67 ~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
+++.|+|.-+.... .-.|+|............ +. .-....+|++|+|++.|.+||..
T Consensus 14 ~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V~A 74 (94)
T d2dn7a1 14 NTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----FG------KDDQHFTVTGLHKGTTYIFRLAA 74 (94)
T ss_dssp TEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----EE------TTCCEEEEECCCTTCEEEEEEEE
T ss_pred CEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEE-----cC------CCccEEEEEccCCeeEEEEEEEE
Confidence 69999999764322 235677766544332211 11 11234578999999999999985
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.0064 Score=45.46 Aligned_cols=75 Identities=17% Similarity=0.175 Sum_probs=43.4
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+..-.. +++.|+|.-+.... .-.|+|.......... +........+ .-..+++|.||+|++.|
T Consensus 5 ~P~~~~~~~~~~--~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~i~~L~p~t~Y 77 (103)
T d1qg3a2 5 EPGRLAFNVVSS--TVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLVDN---PKNRMLLIENLRESQPY 77 (103)
T ss_dssp CCCCCEEEEEET--TEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBC--SCCEEEEECC---TTCCEEEECCCCTTCCE
T ss_pred cCCCcEEEEecC--CEEEEEEEECccCCCCceEEEEEeeccccccccc--cceEEEEecC---CCceEEEEeecCCCCEE
Confidence 577777766554 69999998664322 2256666554332110 0001111101 11246789999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.+||..
T Consensus 78 ~~~V~A 83 (103)
T d1qg3a2 78 RYTVKA 83 (103)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999885
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.79 E-value=0.0089 Score=46.00 Aligned_cols=70 Identities=16% Similarity=0.290 Sum_probs=40.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+..-.+ +++.|+|.-+...+ .-.|+|.............. . .. ....+|++|+|+|.|
T Consensus 18 pP~~~~v~~~~~--~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--~------~~--~~~~~v~~L~p~t~Y 85 (117)
T d1uema_ 18 PPSKPQVTDVTK--NSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN--H------VK--TTLYTVRGLRPNTIY 85 (117)
T ss_dssp CCCCCEEEEECS--SCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE--E------EC--SSEEEECSCCTTCEE
T ss_pred CCCCCEEEEccC--CEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEecc--c------cc--cccceECCCCCCCEE
Confidence 566677765443 69999997443222 23556665443221111100 0 01 124578999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.+||..
T Consensus 86 ~frV~A 91 (117)
T d1uema_ 86 LFMVRA 91 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.74 E-value=0.0056 Score=48.61 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=26.2
Q ss_pred EEEecCCCCCCEEEEEeCC------CCccceEEEECCCC
Q 046207 116 HATIKRLKYDTKYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 116 ~~~l~gL~p~t~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
.++|++|+|+|.|.+||.. |..++...|+|++.
T Consensus 83 ~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 4689999999999999875 34455677999754
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.59 E-value=0.017 Score=43.30 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=41.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.--.. +++.|+|..+.... .-.|+|.......... .... ..-.....|++|+|+|.|
T Consensus 13 ~p~~l~~~~~~~--~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y 80 (106)
T d1wfna1 13 PVGHLSFSEILD--TSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV----THYL------PNVTLEYRVTGLTALTTY 80 (106)
T ss_dssp CCSCCEEESCCS--SEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC----CEEE------CSSCCEEEEESCCTTCEE
T ss_pred CCCCcEEEEecC--CEEEEEEECCCCCCCcEEeEEEEEEECCCCcceE----EEec------CCCeeEEEEccCCCCCEE
Confidence 677777665443 69999998654322 2356666554322110 0000 112235678999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.+||..
T Consensus 81 ~~~V~A 86 (106)
T d1wfna1 81 TIEVAA 86 (106)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.45 E-value=0.016 Score=44.12 Aligned_cols=82 Identities=18% Similarity=0.259 Sum_probs=49.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCE
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTK 127 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 127 (458)
.+|..+++..+. +++.|+|.-+...+ .-.|+|+...... ... .. ..-....+|.+|+|++.
T Consensus 22 ~~P~~~~~~~~~---~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~-~~~-----~~------~~~~~~~~i~~L~p~t~ 86 (113)
T d1x5ia1 22 EVPSSLHVRPLV---TSIVVSWTPPENQNIVVRGYAIGYGIGSPHA-QTI-----KV------DYKQRYYTIENLDPSSH 86 (113)
T ss_dssp CSCSEEEEEEET---TEEEEEEECCSCTTBCCCEEEEEECSSCGGG-EEE-----EC------CTTCCEEEECSCCSSCE
T ss_pred CCCEeeeeeeCC---CEEEEEEEccccCCccEEEEEEEeeeccccc-eee-----ee------eCCccEEEEeccccCcE
Confidence 478888887653 58999999654322 2255665543321 111 10 11223567999999999
Q ss_pred EEEEeCC----CCccc-eEEEECCCC
Q 046207 128 YFYQLGS----GNATR-RFHFTTPPK 148 (458)
Q Consensus 128 Y~Y~v~~----g~~~~-~~~f~T~p~ 148 (458)
|.+||.. |.+.+ .-.++|.|.
T Consensus 87 Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 87 YVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp ECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 9999875 43221 345777763
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.35 E-value=0.016 Score=42.08 Aligned_cols=58 Identities=24% Similarity=0.235 Sum_probs=36.8
Q ss_pred CceEEEEEcCCCC-CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 67 RSVIVSWVTPDEK-YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 67 ~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
+++.|+|..+... ..-.|+|....+...... .... .-...++|+||+|+|.|.++|..
T Consensus 11 ~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~----~~~~------~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 11 TSLLISWDAPAVTVRYYRITYGETGGNSPVQE----FTVP------GSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp SCEEEECCCCSSCCSEEEEEEEETTCCSCCEE----EEEE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred CEEEEEEEccceEecEEEEEEEcCCCCceeEE----EEeC------CCccEEEeCCCCCCCEEEEEEEE
Confidence 6999999765433 234778877654332111 0111 11235789999999999999875
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=94.99 E-value=0.04 Score=41.10 Aligned_cols=72 Identities=13% Similarity=0.164 Sum_probs=43.4
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC------CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE------KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..|.+..... ++++|+|.-... ...-.|+|............ .. .......++|.+|+|+
T Consensus 6 ~~P~~v~~~~~~~--~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~----~~-----~~~~~~~~~i~~L~p~ 74 (105)
T d1cfba2 6 KNPDNVVGQGTEP--NNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN----NI-----FDWRQNNIVIADQPTF 74 (105)
T ss_dssp CCCSCCEEECSST--TCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE----EE-----CCTTCCEEEECSCCSS
T ss_pred CCCcCeEEEEccC--CeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEE----Ee-----cCCCccEEEECCCCCC
Confidence 3677887765543 699999964311 12235677665433221110 10 1122345689999999
Q ss_pred CEEEEEeCC
Q 046207 126 TKYFYQLGS 134 (458)
Q Consensus 126 t~Y~Y~v~~ 134 (458)
|.|.+||..
T Consensus 75 t~Y~~~V~A 83 (105)
T d1cfba2 75 VKYLIKVVA 83 (105)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999875
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.99 E-value=0.0089 Score=46.15 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=25.2
Q ss_pred EEEecCCCCCCEEEEEeCC----CC--ccceEEEECCCC
Q 046207 116 HATIKRLKYDTKYFYQLGS----GN--ATRRFHFTTPPK 148 (458)
Q Consensus 116 ~~~l~gL~p~t~Y~Y~v~~----g~--~~~~~~f~T~p~ 148 (458)
..+|++|+|+|.|.+||.. |. .++...++|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 3578999999999999875 43 346778888653
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.38 E-value=0.019 Score=42.44 Aligned_cols=68 Identities=16% Similarity=0.292 Sum_probs=37.5
Q ss_pred CccEEEEecCCCCCceEEEEEcCCCCC-----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 54 PEQVHITQGDHDGRSVIVSWVTPDEKY-----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 54 p~~v~~~~~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
|..|+++.++ +++.|+|..+.... .-.|+|....+......... . .-...++|.+|+|++.|
T Consensus 8 Pp~l~v~~~~---~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~--~--------~~~~~~~l~~L~p~t~Y 74 (100)
T d2gysa4 8 PPSLQVTKDG---DSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET--L--------QNAHSMALPALEPSTRY 74 (100)
T ss_dssp CCEEEEC------CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE--E--------ESCSEEECCCCCSSCCC
T ss_pred CCccEEEECC---CEEEEEEecCcccCCccceEEEEEEeecccceeceeecc--c--------CCceEEEeCCCCCCCeE
Confidence 3357776544 58999999875332 24677776544321110000 0 01235789999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.+||..
T Consensus 75 ~~rVRa 80 (100)
T d2gysa4 75 WARVRV 80 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.16 E-value=0.1 Score=38.79 Aligned_cols=78 Identities=9% Similarity=0.059 Sum_probs=43.8
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC---CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY---PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
+|..|....... .++|+++|.-+...+ ...+.|............-..... .........+.+++|+|++.|.
T Consensus 7 ~P~~v~~i~~~~-~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~t~Y~ 82 (107)
T d1cd9b1 7 SPSNLSCLMHLT-TNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV---AKKRQNNCSIPRKNLLLYQYMA 82 (107)
T ss_dssp CCEEEEEEEETT-TTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEE---CCTTCCEEEEEGGGCCTTSCEE
T ss_pred CCcCCEEEEecC-CCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeec---cccCccccEEEcCCCCcCceEE
Confidence 687776332222 369999998654332 235566554432111110000000 1122345678899999999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
+||..
T Consensus 83 frV~A 87 (107)
T d1cd9b1 83 IWVQA 87 (107)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99985
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=93.97 E-value=0.045 Score=49.21 Aligned_cols=65 Identities=22% Similarity=0.344 Sum_probs=38.6
Q ss_pred EEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHH-HHhhccceEEccCCccc
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVE-KSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~-~l~~~~P~~~v~GNHD~ 230 (458)
+.++||+|... ..+-.+.+ .+.-.-.|++||+++.+. . ..+.+.-.+. ++.-..-++...||||.
T Consensus 54 v~VvGDiHG~~---~DL~~if~~~g~p~~~~ylFLGDYVDRG~----~--slE~i~lL~aLKi~~P~~v~lLRGNHE~ 122 (294)
T d1jk7a_ 54 LKICGDIHGQY---YDLLRLFEYGGFPPESNYLFLGDYVDRGK----Q--SLETICLLLAYKIKYPENFFLLRGNHEC 122 (294)
T ss_dssp EEEECBCTTCH---HHHHHHHHHHCCTTSSCEEECSCCSSSSS----C--HHHHHHHHHHHHHHSTTTEEECCCTTSS
T ss_pred eEEEEECCCCh---HhHHHHHhhcCCCccceEEeeccccCCCc----c--chHHHHHHHHHHhhCCCeEEEecCCccc
Confidence 78999998653 22222322 223345899999999875 2 2233222211 12223468999999996
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.84 E-value=0.048 Score=48.92 Aligned_cols=65 Identities=18% Similarity=0.230 Sum_probs=38.3
Q ss_pred EEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHH-HHHhhccceEEccCCccc
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFV-EKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~ 230 (458)
+.++||+|... ..+-.+.+ .+.-.-.|++||+++.+. .. .+.+.-.+ -++.-..-++...||||.
T Consensus 47 v~VvGDlHG~~---~DL~~if~~~g~p~~~~ylFLGDYVDRG~----~s--lEvl~lL~alKi~~P~~v~lLRGNHE~ 115 (288)
T d3c5wc1 47 VTVCGDVHGQF---HDLMELFRIGGKSPDTNYLFMGDYVDRGY----YS--VETVTLLVALKVRYRERITILRGNHES 115 (288)
T ss_dssp EEEECBCTTCH---HHHHHHHHHHCCTTTSCEEECSCCCCSSS----SH--HHHHHHHHHHHHHCTTTEEECCCTTSS
T ss_pred eEEEeeCCCCH---HHHHHHHHhcCCCccceEEecCcccCCCC----cc--eeHHHHHHHHHhhCCCeEEEeccCCcc
Confidence 88999998663 22333332 212245899999998876 21 22222111 112223468999999996
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.69 E-value=0.053 Score=49.34 Aligned_cols=66 Identities=15% Similarity=0.120 Sum_probs=39.1
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC--CCC--cEEEEcCccccCCCCCCCchhHHHHHHHHH-HHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN--PKG--QAVLFVGDLSYADDHPQHDNRRWDSWGRFV-EKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~--~~p--d~vl~~GDl~y~~~~~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~ 230 (458)
.+.++||+|... ..+-++.+. ..+ .-.|++||+++.+. . ..+.+.-.+ -++.-..-++.+.||||.
T Consensus 61 pv~VvGDiHGq~---~DL~~if~~~g~p~~~~~ylFLGDYVDRG~----~--slEvi~lL~~lKi~yP~~v~LLRGNHE~ 131 (324)
T d1s95a_ 61 KITVCGDTHGQF---YDLLNIFELNGLPSETNPYIFNGDFVDRGS----F--SVEVILTLFGFKLLYPDHFHLLRGNHET 131 (324)
T ss_dssp EEEEECCCTTCH---HHHHHHHHHHCCCBTTBCEEEESCCSSSST----T--HHHHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CEEEEEECCCCH---HHHHHHHHHCCCCCCCCeEEEecccccCcC----c--ceeehHHHHHHHHhCCCcEEeccCCccc
Confidence 688999998663 333333321 122 34899999999875 2 223322111 112223458999999996
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.28 E-value=0.062 Score=51.18 Aligned_cols=26 Identities=8% Similarity=0.048 Sum_probs=21.6
Q ss_pred HHHHHHHHHHcCccEEEecccccccc
Q 046207 330 RVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 330 ~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+++.+.+++++.++++-||.=..+-
T Consensus 249 ~~a~~~FL~~n~L~~IIR~HE~~~~G 274 (473)
T d1auia_ 249 YPAVCEFLQHNNLLSILRAHEAQDAG 274 (473)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCTTS
T ss_pred hHHHHHHHHHcCCcEEEEcCcchhhh
Confidence 46788999999999999999965443
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.02 E-value=0.19 Score=36.37 Aligned_cols=72 Identities=15% Similarity=0.058 Sum_probs=41.1
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCCCe--EEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPNV--VTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~--v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
+|..|.+.... ..++++|.-+...+... ++|............... . .........+++|.+++.|++
T Consensus 3 ~P~nv~v~s~n---~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~l~~~~~Y~f 72 (98)
T d1fyhb1 3 TPTNVTIESYN---MNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACI-N------ISHHYCNISDHVGDPSNSLWV 72 (98)
T ss_dssp CCEEEEEECBS---SCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEE-E------ESSSEEECGGGCCSTTSCEEE
T ss_pred cCCceEEEEeC---CcEEEEECCCCCCCCCceeEEEEEeccccceeEEeee-e------cccceeeeEecccCCCCEEEE
Confidence 57778776543 36689999775444333 333333322221111110 0 122334557889999999999
Q ss_pred EeCC
Q 046207 131 QLGS 134 (458)
Q Consensus 131 ~v~~ 134 (458)
||..
T Consensus 73 RV~A 76 (98)
T d1fyhb1 73 RVKA 76 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.77 E-value=0.084 Score=38.49 Aligned_cols=67 Identities=16% Similarity=0.194 Sum_probs=36.5
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC--------CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY--------PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLK 123 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 123 (458)
.+|+.|.+....++ +.+.|+|..+.... .-.|+|.............. . . +...|.
T Consensus 3 dPP~nl~v~~~~~~-~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~~-------~---~-----t~~~L~ 66 (94)
T d3d85d3 3 DPPKNLQLKPLKNS-RQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFT-------D---K-----TSATVI 66 (94)
T ss_dssp CCCEEEEEEEC-----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEE-------S---S-----SEEEEC
T ss_pred CCCcccEEEEecCC-CeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEeccc-------c---c-----eEEEec
Confidence 47888888775554 68999999875321 12566665443322211110 0 1 123588
Q ss_pred CCCEEEEEeCC
Q 046207 124 YDTKYFYQLGS 134 (458)
Q Consensus 124 p~t~Y~Y~v~~ 134 (458)
|++.|.+||..
T Consensus 67 p~~~Y~v~VRa 77 (94)
T d3d85d3 67 CRKNASISVRA 77 (94)
T ss_dssp CCSSCEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 99999999875
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.13 E-value=0.063 Score=40.92 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=44.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCC------CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDE------KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.+|..|.+..+..+ +++.|+|.-+.. .....+.|....+..... .... ...-...++|++|+|+
T Consensus 12 ~pP~~v~v~~~~s~-~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~------~~~~---~~~~~~~~~i~~L~~~ 81 (117)
T d2cspa1 12 APPQDVTVQAGVTP-ATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVA------EVIF---PTADSTAVELVRLRSL 81 (117)
T ss_dssp CCCEEEEECCCSST-TEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEE------EECC---TTCSEEEEESHHHHHH
T ss_pred CCCCccEEEEecCC-CEEEEEEcCCCccccCcccccceEEEEEEeecccce------eeee---eccceeeeeccCCCCC
Confidence 47877777554333 589999985421 123466787654322111 0111 1222345789999999
Q ss_pred CEEEEEeCC
Q 046207 126 TKYFYQLGS 134 (458)
Q Consensus 126 t~Y~Y~v~~ 134 (458)
|.|.+||..
T Consensus 82 t~Y~v~V~A 90 (117)
T d2cspa1 82 EAKGVTVRT 90 (117)
T ss_dssp TCSCBEEEE
T ss_pred cEEEEEEEE
Confidence 999999875
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.02 E-value=0.0055 Score=46.01 Aligned_cols=71 Identities=17% Similarity=0.172 Sum_probs=39.4
Q ss_pred CceEEEEEcCCCCCCCeEEEEec----CCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC------CC
Q 046207 67 RSVIVSWVTPDEKYPNVVTHWEA----NSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS------GN 136 (458)
Q Consensus 67 ~~~~i~W~t~~~~~~~~v~y~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------g~ 136 (458)
+++.|+|..+.......+.|... .+..... ... .......+.+.+.+|+|++ |.+||.. |.
T Consensus 19 ~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~----~~~----~~~~~~~~~~~~~~L~~~t-Y~~rV~A~n~~G~g~ 89 (102)
T d2dtge1 19 NVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHL----CDT----RKHFALERGCRLRGLSPGN-YSVRIRATSLAGNGS 89 (102)
T ss_dssp SCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCC----CCC----SSSCCCTTCCCCCSCCSSE-ECCCCCEEETTBCCC
T ss_pred CEEEEEEEeCCCCcceEEEeeeEEEecCCCCcee----eee----eecccceEEEEEeccceee-EEEEEEEEcCCccCC
Confidence 68999998765444445555432 2111110 000 0012233457789999975 9999875 34
Q ss_pred ccceEEEECC
Q 046207 137 ATRRFHFTTP 146 (458)
Q Consensus 137 ~~~~~~f~T~ 146 (458)
.|+.-.|.|+
T Consensus 90 ~S~~v~f~~~ 99 (102)
T d2dtge1 90 WTEPTYFYVT 99 (102)
T ss_dssp CCCCCEECCC
T ss_pred CCCCEEEEcc
Confidence 4556667663
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.87 E-value=0.5 Score=35.37 Aligned_cols=54 Identities=11% Similarity=0.154 Sum_probs=31.0
Q ss_pred CceEEEEEcCCC--CC----CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCC
Q 046207 67 RSVIVSWVTPDE--KY----PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 67 ~~~~i~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
+++.|.|..... .. .-.|+|............ . + . ...+.+|+|+|.|.+||..
T Consensus 32 ~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~~~-~-------~--~----~~~~~~L~p~t~Y~~~V~A 91 (117)
T d1wj3a_ 32 TKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-T-------N--K----TSAELVLPIKEDYIIEVKA 91 (117)
T ss_dssp TEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-E-------S--S----SEEEEECCCSSCEEEEEEE
T ss_pred CEEEEEEeecccccCCCceeEEEEEEEecCCCceeeee-c-------e--e----eEEEeeccCCcEEEEEEEE
Confidence 689999986422 11 125555554433222111 1 0 1 1245589999999999875
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.64 E-value=0.25 Score=35.67 Aligned_cols=70 Identities=9% Similarity=-0.012 Sum_probs=41.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC---CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY---PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
+|..|.+..-.. ++++++|.-+...+ ...|+|........... .. ..... -...+.+|+|++.|+
T Consensus 6 ~P~n~~~~~~~~--~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~------~~--~~~~~--~~~~~~~L~~~~~Y~ 73 (95)
T d1bqua1 6 KPKNLSCIVNEG--KKMRCEWDGGRETHLETNFTLKSEWATHKFADCK------AK--RDTPT--SCTVDYSTVYFVNIE 73 (95)
T ss_dssp CCEEEEEEEETT--SCCEEEEECCSCCSSCCEEEEEEEETTEECCCEE------CC--SSCTT--EEECSSCCCTTSCEE
T ss_pred CCeeeEEEEccC--CEEEEEEeCcccCCCceEEEEEEEEcccceeEee------cc--cccce--eeeeeeecCCCcEEE
Confidence 787788776653 69999998765332 23556655433211110 00 00111 223567999999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
+||..
T Consensus 74 f~V~A 78 (95)
T d1bqua1 74 VWVEA 78 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99985
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.33 E-value=0.021 Score=44.20 Aligned_cols=22 Identities=18% Similarity=0.010 Sum_probs=18.3
Q ss_pred eEEEEEecCCCCCCEEEEEeCC
Q 046207 113 YIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 113 ~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
.....+|+||+|+|.|.++|..
T Consensus 80 ~~~~~~l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 80 NHPGWLMRGLKPWTQYAIFVKT 101 (125)
T ss_dssp SCCEEEECSCCSSCBCCBEEEE
T ss_pred ccCEEEECCCccCCEEEEEEEE
Confidence 3445789999999999999874
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.76 E-value=0.33 Score=35.46 Aligned_cols=72 Identities=13% Similarity=0.067 Sum_probs=45.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCC---CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKY---PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
+|..|.+.... ...+|.|.-+...+ .-.|+|.......+..+..-.. .........+.+|.++..|+
T Consensus 6 ~P~nv~~~s~n---~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~-------~t~~~~~~~~~~l~~~~~Y~ 75 (99)
T d1y6kr1 6 SPPSVWFEAEF---FHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQ-------TLSYDLTAVTLDLYHSNGYR 75 (99)
T ss_dssp CCSCEEEEEET---TEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEES-------SSEEECGGGGTTGGGSSCEE
T ss_pred CCCcceEEEEC---CEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEeecc-------ccccceeeeeeecCCCCEEE
Confidence 57788887664 47999997554322 2478887766555655543211 01011112467899999999
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
+||..
T Consensus 76 fRVrA 80 (99)
T d1y6kr1 76 ARVRA 80 (99)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.19 E-value=0.45 Score=38.16 Aligned_cols=33 Identities=21% Similarity=0.149 Sum_probs=24.5
Q ss_pred EEEEecCCCCCCEEEEEeCC----CC-----ccceEEEECCC
Q 046207 115 HHATIKRLKYDTKYFYQLGS----GN-----ATRRFHFTTPP 147 (458)
Q Consensus 115 ~~~~l~gL~p~t~Y~Y~v~~----g~-----~~~~~~f~T~p 147 (458)
...+|++|+|+|.|.++|.. |. .+..-.+||+|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 35779999999999999864 21 13466788876
|