Citrus Sinensis ID: 046241
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 638 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LMX4 | 613 | Probable inactive purple | yes | no | 0.774 | 0.805 | 0.383 | 2e-93 | |
| Q5MAU8 | 611 | Probable inactive purple | no | no | 0.857 | 0.895 | 0.334 | 3e-92 | |
| Q8H1R2 | 615 | Probable inactive purple | no | no | 0.797 | 0.827 | 0.342 | 7e-87 | |
| Q9ZQ81 | 651 | Probable inactive purple | no | no | 0.778 | 0.763 | 0.307 | 7e-63 | |
| Q9LMG7 | 656 | Probable inactive purple | no | no | 0.617 | 0.600 | 0.350 | 2e-58 | |
| Q687E1 | 368 | Nucleotide pyrophosphatas | N/A | no | 0.496 | 0.861 | 0.367 | 1e-56 | |
| Q9LJU7 | 437 | Purple acid phosphatase 1 | no | no | 0.495 | 0.723 | 0.281 | 3e-27 | |
| A5D6U8 | 443 | Iron/zinc purple acid pho | yes | no | 0.554 | 0.799 | 0.293 | 3e-25 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.435 | 0.636 | 0.278 | 2e-24 | |
| Q9SFU3 | 532 | Purple acid phosphatase 1 | no | no | 0.373 | 0.447 | 0.310 | 3e-24 |
| >sp|Q9LMX4|PPA1_ARATH Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 299/566 (52%), Gaps = 72/566 (12%)
Query: 97 PAESDWVAMISPSDSNVETCLSAEAMYVQTGDVSSLPLLCHYPVKAKL--MSNDRDYLSC 154
P++ DW+ + SP+D N TC M VQ P LC PVK + SN R
Sbjct: 74 PSDDDWIGVFSPADFNASTCPGDNKM-VQP------PRLCSAPVKFQYANFSNPR----- 121
Query: 155 KKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFVFFAGGFDTPCILNRTNPINFANPK 214
Y+N T +GS+K +IN R+D F F+GG P ++ +N + F NP
Sbjct: 122 -------YTN------TGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPN 168
Query: 215 SPLYGHLSSSDSTATSMRVTWVSGD----KEP---QQVQYGDGKSETSKVTTFTQDDMCN 267
+P+Y L+ M VTW SG EP V+ G+ K + TF ++ MC
Sbjct: 169 APVYPRLALGKEW-DEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCG 227
Query: 268 ATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323
A PA+ GW DPGYIHTA + L P++ ++YR G L + WS + QFK+ P
Sbjct: 228 A-----PARTVGWRDPGYIHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFP 282
Query: 324 GSSEVLRFLTYGDMGKAPLDDSAEHY-IQPGSLSVIKAMADEVDNGSVDSIFHIGDISYA 382
G + V + + +GDMGKA +D S+E+ Q SL+ K + ++ D++FHIGDI YA
Sbjct: 283 GQNSVQQVVIFGDMGKAEVDGSSEYNDFQRASLNTTKQLIKDLKK--TDAVFHIGDICYA 340
Query: 383 TGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFP 442
G+L +WD F+ QI P+AS V YM A GNHER + +SGS YE DSGGECGV ET F
Sbjct: 341 NGYLSQWDQFIAQIEPIASTVPYMIASGNHERVW-PNSGSFYEGLDSGGECGVPAETMFY 399
Query: 443 MPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHR 502
+P R K WYS + F V TEHDW E +EQY +++ +ASVDR K PWLIF HR
Sbjct: 400 VPAQNRAKVWYSSDYGMFRFCVADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHR 459
Query: 503 PM-------YSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMP 555
+ Y+ S + ++++ L KVD+A++GH HNYERTC VY+ C
Sbjct: 460 VLGYSSTYFYAEEGSFAEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVC---- 515
Query: 556 TKDANGIDTYDHSNYSAPVQAVIGMA----GFTLDKFPDNADHTWSLIRISKFGYLRGNA 611
+++ SNY AP+ I + G L +F D WSL R +G+L+ A
Sbjct: 516 -------TSHEKSNYKAPLNGTIHIVAGGGGAGLAEFSD-LQPNWSLFRDYDYGFLKLTA 567
Query: 612 -NKEEMKFEFVNSDTREVEDSFRIIK 636
+ + FE+ S V DSF I K
Sbjct: 568 IDHSNLLFEYKKSSDGRVHDSFTISK 593
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q5MAU8|PPA27_ARATH Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 211/631 (33%), Positives = 307/631 (48%), Gaps = 84/631 (13%)
Query: 26 GSASSSLLHPWALNSSIEHQNYTAISPFRLLNRRFLSECPDSNPYLQINVSKSSDLSDDE 85
G + S + +A+N + H + +SP L S D E
Sbjct: 25 GDQALSQIDIYAINLAQHHSAFIHVSPLVL----------------------GSQGQDTE 62
Query: 86 FVTVTVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVSSLPLLCHYPVKAKLM 145
+V V +S P+ DWV + SP+ + +C T D P +C PVK
Sbjct: 63 WVNVVISNPE-PSSDDWVGVFSPAKFDSSSC-------APTDDKEIAPFICSAPVKYMYA 114
Query: 146 SNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFVFFAGGFDTPCILNRT 205
+ DY+ T + +KF +IN R D F F GG P +++ +
Sbjct: 115 KSSPDYMK-----------------TGNAVLKFMLINQRADFSFALFTGGLSNPTLVSVS 157
Query: 206 NPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGKSETSK-------VT 258
N ++F NPK+P+Y L+ M VTW SG + V + + + ++
Sbjct: 158 NHVSFINPKAPVYPRLALG-KKWDEMTVTWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTL 216
Query: 259 TFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVG----WSDK 314
TFT++ MC A PA+ GW DPG+IHTA + L P+ ++YR G +L+ WS
Sbjct: 217 TFTRNSMCGA-----PARTVGWRDPGFIHTASLKDLWPNLKYTYRMGHELMNGSIVWSKN 271
Query: 315 IQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHY-IQPGSLSVIKAMADEVDNGSVDSI 373
FK+ P G + R + +GDMGK D S E+ QPGSL+ + ++ N +D +
Sbjct: 272 FTFKSSPYPGQDSLQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQLIKDLKN--IDIV 329
Query: 374 FHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGEC 433
FHIGDI+YA G++ +WD F Q+ P+AS V YM A GNHERD+ SGS Y DSGGEC
Sbjct: 330 FHIGDITYANGYISQWDQFTAQVEPIASTVPYMVASGNHERDW-PDSGSFYGGKDSGGEC 388
Query: 434 GVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKT 493
GV ET F P + K WYS + F V TEHDW E SEQY+++++ +ASVDR
Sbjct: 389 GVPAETMFDFPAENKAKFWYSADYGMFRFCVADTEHDWREGSEQYQFIERCLASVDRRAQ 448
Query: 494 PWLIFSGHRPM-------YSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSV 546
PWLIF HR + Y S + ++++ L KVD+A +GHVHNYERTC +
Sbjct: 449 PWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHNYERTCPI 508
Query: 547 YKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGY 606
Y+ C+ +G + + V+G AG L F + WS+ R +G+
Sbjct: 509 YQNQCMDNEKSHYSGA-------FKGTIHVVVGGAGSHLSSF-SSLKPKWSIFRDYDYGF 560
Query: 607 LRGNA-NKEEMKFEFVNSDTREVEDSFRIIK 636
++ A + + FE+ S V DSF I +
Sbjct: 561 VKLTAFDHSSLLFEYKKSSNGAVHDSFTIFR 591
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H1R2|PPA24_ARATH Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 322 bits (824), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 198/578 (34%), Positives = 289/578 (50%), Gaps = 69/578 (11%)
Query: 83 DDEFVTVTVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVSSLPLLCHYPVKA 142
D E+V + +S P DW+ + SP+ + C + +G P +C P+K
Sbjct: 63 DTEWVNLAISNPK-PTSDDWIGVFSPAKFDSGNC------WPTSGGKEKTPYICSSPIKY 115
Query: 143 KLMSNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFVFFAGGFDTPCIL 202
++ DY+ + + ++KF +IN R D+ F F+ G P +L
Sbjct: 116 MYCNSHPDYMK-----------------SGNVTLKFQIINQRADVSFALFSNGVQEPHLL 158
Query: 203 NRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGD-------GKSETS 255
+NP+ F NPK+P+Y L+ + M VTW SG + V + + + +
Sbjct: 159 GVSNPVAFFNPKAPVYPRLALGKN-WDEMTVTWTSGYNIDEAVPFIEWSAKGLPARRSPA 217
Query: 256 KVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVG----W 311
TF ++ MC +PA+ GW DPG+ HT+ + L P+ + YR G DLV W
Sbjct: 218 GTLTFNRNSMCG-----NPARGVGWRDPGFFHTSFLKELWPNREYIYRLGHDLVNGSTIW 272
Query: 312 SDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHY-IQPGSLS----VIKAMADEVD 366
S F + P G R + +GDMGK D S E+ QPGSL+ VIK + D
Sbjct: 273 SKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQVIKDLKD--- 329
Query: 367 NGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYES 426
+D +FHIGD++Y+ G+L +WD F Q+ P+AS V YM A GNHERD+ +GS Y
Sbjct: 330 ---IDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWP-DTGSFYAG 385
Query: 427 PDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMA 486
DSGGECGV ET F P R K WY + F V +EHDW E +EQY++++ +A
Sbjct: 386 TDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIENCLA 445
Query: 487 SVDRSKTPWLIFSGHRPM-------YSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHN 539
+VDR PWLIF HR + Y + + ++++ L KVDLA +GHVHN
Sbjct: 446 TVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAFYGHVHN 505
Query: 540 YERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLI 599
YERTC +Y+ C+ N D Y + + V+G AG L F WSL+
Sbjct: 506 YERTCPIYESQCV------NNDKDHYS-GTFKGTIHVVVGGAGSHLSPFSSLVP-KWSLV 557
Query: 600 RISKFGYLRGNA-NKEEMKFEFVNSDTREVEDSFRIIK 636
R FG+++ A + + FE+ S T +V DSF I +
Sbjct: 558 RDYDFGFVKLTASDHSSLLFEYKKSSTGQVYDSFNISR 595
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9ZQ81|PPA9_ARATH Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 242 bits (618), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 286/625 (45%), Gaps = 128/625 (20%)
Query: 73 INVSKSSDLSDDEFVTVTVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVSSL 132
I++S + + V + SGV P++ DW+ + SP DS +
Sbjct: 24 ISISPQTLNRSGDIVVIKWSGVESPSDLDWLGIYSPPDSPHD------------------ 65
Query: 133 PLLCHYPVKAKLMSNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFVFF 192
H+ + K +S+ + S SGSI + N+R++ F F
Sbjct: 66 ----HF-IGYKFLSDSPTWQSG------------------SGSISLPLTNLRSNYTFRIF 102
Query: 193 AGGFD----------------TPCILNRTNPINFA-NPKSPLYGHLSSSDSTATSMRVTW 235
T +L +N +NF P HLS +D+ MRV +
Sbjct: 103 HWTQSEINPKHQDHDHNPLPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNI-NEMRVVF 161
Query: 236 VSGDKEPQQVQYGDGKSETSKVTT-----FTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290
V+GD E ++ +YG+ K + + + + MC+A A + GW DPG+ AV
Sbjct: 162 VTGDGEEREARYGEVKDKLDNIAVARGVRYEIEHMCHAPANST----VGWRDPGWTFDAV 217
Query: 291 MTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMG-KAPLDDSAEHY 349
M L+ + Y+ GSDL GWS+ F + G S E L F+ +GDMG P
Sbjct: 218 MKNLKQGIRYYYQVGSDLKGWSEIHSFVSRNEG-SEETLAFM-FGDMGCYTPYTTFIRG- 274
Query: 350 IQPGSLSVIKAMADEVDNGSVDS---IFHIGDISYATGFLVEWDFFLHQISPVASRVSYM 406
+ SLS +K + +++ D + HIGDISYA G+ WD F QI P+AS+V Y
Sbjct: 275 -EEESLSTVKWILRDIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYH 333
Query: 407 TAIGNHERDYLGS------SGSVYESPDSGGECGVAYETYFPMPI-----------PARD 449
IGNHE D+ + VY DSGGECGV Y F MP P
Sbjct: 334 VCIGNHEYDWPNQPWKPDWAAYVY-GKDSGGECGVPYSVKFNMPGNSTEATGMVKGPQSR 392
Query: 450 KPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSS-- 507
+YS + VHF +STE D+ + +QY ++K D+ SV+RSKTP+++ GHRPMY++
Sbjct: 393 NLYYSYDMGSVHFVYISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHRPMYTTSR 452
Query: 508 --LSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTY 565
+++ K ++ +EPLL+ N V +AL+GHVH YER C++ +C +
Sbjct: 453 KIRDAAIREKMIEHLEPLLVKNNVTVALWGHVHRYERFCAISNNTCGERWQGN------- 505
Query: 566 DHSNYSAPVQAVIGMAGF-------------TLDKFPDNADHTWSLIRISKFGYLRGNAN 612
PV VIGMAG + FP A+ S+ R +FGY+R AN
Sbjct: 506 -------PVHLVIGMAGKDSQPMWEPRANHEDVPIFPQPAN---SMYRGGEFGYIRLVAN 555
Query: 613 KEEMKFEFVNSDTREVEDSFRIIKA 637
KE + +V + EV D I+ +
Sbjct: 556 KERLTLSYVGNHDGEVHDVVEILAS 580
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LMG7|PPA2_ARATH Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 229/456 (50%), Gaps = 62/456 (13%)
Query: 220 HLSSSDSTATSMRVTWVSGDKEPQQVQYGD-----GKSETSKVTTFTQDDMCNATALQSP 274
HLS ++ T MRV +V+GD E + V+YG+ G S ++ + ++ MC++ A +
Sbjct: 149 HLSFTNMVNT-MRVMFVAGDGEERFVRYGESKDLLGNSAAARGMRYEREHMCDSPANST- 206
Query: 275 AKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTY 334
GW DPG+I VM L + Y+ GSD GWS+ I + E + F+ +
Sbjct: 207 ---IGWRDPGWIFDTVMKNLNDGVRYYYQVGSDSKGWSE-IHSYIARDVTAEETVAFM-F 261
Query: 335 GDMGKA-PLDDSAEHYIQPGSLSVIKAMADEVD--NGSVDSIFHIGDISYATGFLVEWDF 391
GDMG A P Q S+S +K + +++ I HIGDISYA G+ WD
Sbjct: 262 GDMGCATPYTTFIR--TQDESISTVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDE 319
Query: 392 FLHQISPVASRVSYMTAIGNHERDYLGS------SGSVYESPDSGGECGVAYETYFPMP- 444
F Q+ P+AS V Y IGNHE D+ + S+Y + D GGECGV Y F MP
Sbjct: 320 FFAQVEPIASTVPYHVCIGNHEYDFSTQPWKPDWAASIYGN-DGGGECGVPYSLKFNMPG 378
Query: 445 ---------IPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPW 495
P +YS + VHF +STE ++ + QYE++K+D+ SVDR KTP+
Sbjct: 379 NSSESTGMKAPPTRNLYYSYDMGTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPF 438
Query: 496 LIFSGHRPMYSSLSSSVD----NKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSC 551
++ GHRPMY++ + D K V+ +EPL + N V LAL+GHVH YER C + +C
Sbjct: 439 VVVQGHRPMYTTSNEVRDTMIRQKMVEHLEPLFVKNNVTLALWGHVHRYERFCPISNNTC 498
Query: 552 LAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKF----PDNAD------HTWSLIRI 601
T N PV VIGMAG P++ D S+ R
Sbjct: 499 -----------GTQWQGN---PVHLVIGMAGQDWQPIWQPRPNHPDLPIFPQPEQSMYRT 544
Query: 602 SKFGYLRGNANKEEMKFEFVNSDTREVEDSFRIIKA 637
+FGY R ANKE++ FV + EV D+ ++ +
Sbjct: 545 GEFGYTRLVANKEKLTVSFVGNHDGEVHDTVEMLAS 580
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q687E1|NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2 | Back alignment and function description |
|---|
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 188/337 (55%), Gaps = 20/337 (5%)
Query: 309 VGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHY-IQPGSLSVIKAMADEVDN 367
V W+ F+ PP G + + R + +GDMGKA D S E QPGSL+ + +++DN
Sbjct: 23 VVWAKPYTFRAPPTPGQNSLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIEDLDN 82
Query: 368 GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESP 427
D +FHIGD+ YA G+L +WD F Q++P++++ YM A GNHERD+ ++G ++
Sbjct: 83 --YDIVFHIGDMPYANGYLSQWDQFTAQVAPISAKKPYMVASGNHERDWP-NTGGFFDVK 139
Query: 428 DSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMAS 487
DSGGECGV ET + P R WY ++ F V +EHDW E + QY+++++ +++
Sbjct: 140 DSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLST 199
Query: 488 VDRSKTPWLIFSGHRPM-YSSLSSSVDN------KFVDAVEPLLLDNKVDLALFGHVHNY 540
VDR PWLIF+ HR + YSS S D + ++++ L +VD+A FGHVHNY
Sbjct: 200 VDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNY 259
Query: 541 ERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIR 600
ERTC +Y+ C+ N T+ + + V G G L + A WS+ R
Sbjct: 260 ERTCPLYQSQCV-------NADKTHYSGTMNGTIFVVAGGGGSHLSSYT-TAIPKWSIFR 311
Query: 601 ISKFGYLRGNA-NKEEMKFEFVNSDTREVEDSFRIIK 636
+G+ + A N + FE++ S +V DSF I +
Sbjct: 312 DHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHR 348
|
Hydrolyzes pyrophosphate, phosphodiester and phosphosulfate linkages of nucleotide-sugars, sulfonucleotides and nucleoside di and triphosphates. Highest activity observed with the substrates ADP-glucose and adenosine 5'-phosphosulfate. Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 165/384 (42%), Gaps = 68/384 (17%)
Query: 231 MRVTWVSGDKE-PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289
MRVTWV+ DK P V+YG + K + Q + + + + + G IH
Sbjct: 60 MRVTWVTNDKSSPSFVEYG---TSPGKYSYLGQGESTSYSYIM--------YRSGKIHHT 108
Query: 290 VMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHY 349
V+ L + YR G + + KTPPA + F GD+G+
Sbjct: 109 VIGPLEADTVYYYRCGGE----GPEFHLKTPPA---QFPITFAVAGDLGQT--------- 152
Query: 350 IQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAI 409
K+ D +D GD+SYA +WD F + P+AS +M
Sbjct: 153 ------GWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKWDTFGELVQPLASVRPWMVTQ 206
Query: 410 GNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP---ARDKPWYSIEQAGVHFTVMS 466
GNHE++ + + V++ + + MP + +YS E AGVH ++
Sbjct: 207 GNHEKESIPFIVDEF----------VSFNSRWKMPYEESGSNSNLYYSFEVAGVHAIMLG 256
Query: 467 TEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVD--NKFVDAVEPLL 524
+ D+ S+QY W+K D++ VDR +TPWLI H P Y+S ++ ++ + +EPLL
Sbjct: 257 SYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEMEPLL 316
Query: 525 LDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFT 584
+ VD+ GHVH YERT V NG S+ PV IG G
Sbjct: 317 YASGVDIVFTGHVHAYERTKRV------------NNG-----KSDPCGPVHITIGDGGNR 359
Query: 585 --LDKFPDNADHTWSLIRISKFGY 606
L + + WS+ R + FG+
Sbjct: 360 EGLARKYKDPSPEWSVFREASFGH 383
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|A5D6U8|PAPL_DANRE Iron/zinc purple acid phosphatase-like protein OS=Danio rerio GN=papl PE=2 SV=1 | Back alignment and function description |
|---|
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 177/450 (39%), Gaps = 96/450 (21%)
Query: 229 TSMRVTWVSGDKEPQQVQYG--DGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286
SM VTW S +K V+YG GK F+ N++ + ++ YI
Sbjct: 43 NSMLVTWSSANKTDSVVEYGLWGGK-------LFSHSATGNSSIFINEGAEY---RVMYI 92
Query: 287 HTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLR--FLTYGDMGKAPLDD 344
H ++T LRP+A++ Y GS GWS+ F A S F +GD+G
Sbjct: 93 HRVLLTDLRPAASYVYHCGSG-AGWSELFFFT---ALNESVFFSPGFALFGDLGNE---- 144
Query: 345 SAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVE-----WDFFLHQISPV 399
P SLS ++ E G+ D I HIGD +Y L E D F+ QI +
Sbjct: 145 ------NPQSLSRLQK---ETQIGTYDVILHIGDFAYD---LYEDNGRIGDEFMKQIQSI 192
Query: 400 ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAG 459
A+ V YMT GNHE + S Y F MP + WYS
Sbjct: 193 AAYVPYMTCPGNHEWAFNFSQ----------------YRARFSMPGDT-EGLWYSWNVGP 235
Query: 460 VHFTVMSTE-------HDWSENSEQYEWMKKDMASVDR----SKTPWLIFSGHRPMYSS- 507
H STE + QYEW++ D+ +R ++ PW+I GHRPMY S
Sbjct: 236 AHIISFSTEVYFYYLEYGLDLLFRQYEWLRADLQEANRPENRAERPWIITMGHRPMYCSN 295
Query: 508 --------------LSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLA 553
L + +E L VDL L+ H H YER VY
Sbjct: 296 DDDDDCTHFQSYVRLGRNDTKPPAPGLEELFYQYGVDLELWAHEHTYERLWPVYDYKVF- 354
Query: 554 MPTKDANGIDTYDHSNYSAPVQAVIGMAGF--TLDKF-PDNADHTWSLIRISKFGYLRGN 610
NG + N APV + G AG D F P D WS R + +GY R
Sbjct: 355 ------NGSSEEPYVNPKAPVHIITGSAGCREKHDGFIPKPRD--WSAFRSTDYGYTRLQ 406
Query: 611 -ANKEEMKFEFVNSDTR-EVEDSFRIIKAK 638
N + E V+ D +V D ++K K
Sbjct: 407 LINNTHLYLEQVSDDQYGKVIDQMTLVKEK 436
|
Danio rerio (taxid: 7955) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 143/330 (43%), Gaps = 52/330 (15%)
Query: 242 PQQVQYGDGKSETSKVTTFTQDDMCNA---------------TALQSPAKDFGWHDPGYI 286
PQQV + +VT +T DD+ A TA +S + + +++ G I
Sbjct: 51 PQQVHISLAGKDHMRVT-YTTDDLNVASMVEYGKHPKKYDKKTAGESTSYTYFFYNSGKI 109
Query: 287 HTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSA 346
H + L+P+ + YR G G D+ FKTPP S + F GD+G+
Sbjct: 110 HHVKIGPLKPNTKYYYRCG----GHGDEFSFKTPP---SKFPIEFAVAGDLGQTDW---- 158
Query: 347 EHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYM 406
++ + D++ D GD+SYA WD F + +AS +M
Sbjct: 159 ----------TVRTL-DQIRKRDFDVFLLPGDLSYADTHQPLWDSFGRLLETLASTRPWM 207
Query: 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP---ARDKPWYSIEQAGVHFT 463
GNHE + P + +Y + MP + +YS + AGVH
Sbjct: 208 VTEGNHE---------IESFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHTV 258
Query: 464 VMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSV--DNKFVDAVE 521
++ + + +S+QY W++ D+ VDR KTPWL+ H P YS+ + K A+E
Sbjct: 259 MLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNKAHYGEGEKMRSALE 318
Query: 522 PLLLDNKVDLALFGHVHNYERTCSVYKQSC 551
LL +VD+ GHVH YER +Y +
Sbjct: 319 SLLYRAQVDVVFAGHVHTYERFKPIYNKKA 348
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SFU3|PPA15_ARATH Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 128/296 (43%), Gaps = 58/296 (19%)
Query: 284 GYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQ-FKTPPAGG-SSEVLRFLTYGDMGKA- 340
G IH +TGL+PS + YR G KI F+T P SS R GD+G
Sbjct: 140 GIIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGLTY 199
Query: 341 PLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLV------------- 387
D+ H I + S D I IGD+SYA +L
Sbjct: 200 NTTDTISHLI----------------HNSPDLILLIGDVSYANLYLTNGTSSDCYSCSFP 243
Query: 388 ----------EWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAY 437
WD++ + + S+V M GNHE + L + +E AY
Sbjct: 244 ETPIHETYQPRWDYWGRFMENLTSKVPLMVIEGNHEIE-LQAENKTFE----------AY 292
Query: 438 ETYFPMPI---PARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTP 494
+ F P + +YS G+HF ++ + +++EQYEW+KKD+A VDRS TP
Sbjct: 293 SSRFAFPFNESGSSSTLYYSFNAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTP 352
Query: 495 WLIFSGHRPMYSSLSSSVDNK--FVDAVEPLLLDNKVDLALFGHVHNYERTCSVYK 548
WL+ S H P YSS ++ +A+E LL D+ GHVH YER+ VY
Sbjct: 353 WLVASWHPPWYSSYTAHYREAECMKEAMEELLYSYGTDIVFNGHVHAYERSNRVYN 408
|
Acid phosphatase activity with p-nitrophenyl phosphate (pNPP), D-myoinositol 1-phosphate (Ins(1)P1), phytic acid and Myo-inositol hexakisphosphate. Low or no activity with Glc-6-P and ATP. Confers shoot growth stimulation, enhanced salt and osmotic stress tolerance, and ABA insensitivity. May modulate ascorbic acid (AsA) levels by controlling the input of myoinositol into this branch of AsA biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 638 | ||||||
| 359495063 | 639 | PREDICTED: probable inactive purple acid | 0.971 | 0.970 | 0.718 | 0.0 | |
| 296081295 | 1306 | unnamed protein product [Vitis vinifera] | 0.973 | 0.475 | 0.718 | 0.0 | |
| 255544093 | 639 | Nucleotide pyrophosphatase/phosphodieste | 0.935 | 0.934 | 0.724 | 0.0 | |
| 224075810 | 623 | predicted protein [Populus trichocarpa] | 0.952 | 0.975 | 0.707 | 0.0 | |
| 356529842 | 640 | PREDICTED: probable inactive purple acid | 0.968 | 0.965 | 0.683 | 0.0 | |
| 356544306 | 635 | PREDICTED: probable inactive purple acid | 0.965 | 0.970 | 0.688 | 0.0 | |
| 357470893 | 611 | Nucleotide pyrophosphatase/phosphodieste | 0.923 | 0.963 | 0.712 | 0.0 | |
| 147784700 | 650 | hypothetical protein VITISV_026818 [Viti | 0.973 | 0.955 | 0.666 | 0.0 | |
| 225449885 | 652 | PREDICTED: probable inactive purple acid | 0.940 | 0.920 | 0.680 | 0.0 | |
| 449445160 | 647 | PREDICTED: probable inactive purple acid | 0.946 | 0.933 | 0.652 | 0.0 |
| >gi|359495063|ref|XP_002267993.2| PREDICTED: probable inactive purple acid phosphatase 27-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/628 (71%), Positives = 534/628 (85%), Gaps = 8/628 (1%)
Query: 14 FVYVLF---IIILFPGSASSSLLHPWALNSSIEHQNYTAISPFRLLNRRFLSECPDSNPY 70
+V+ LF +++ FPG SSS P ++S E QNYTAIS FR+LNRR L ECPD+NPY
Sbjct: 15 WVFRLFLAAVLLSFPGPCSSSFSPPITISSIDEFQNYTAISDFRILNRRVLVECPDANPY 74
Query: 71 LQINVSKSSDLSDDEFVTVTVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVS 130
LQINVSK+S LSD+E++TVTVSGVLLPAE+DWVAMISPS S+V +C A Y+QTGD+S
Sbjct: 75 LQINVSKTSSLSDEEYLTVTVSGVLLPAETDWVAMISPSHSDVSSCPLAAIFYIQTGDIS 134
Query: 131 SLPLLCHYPVKAKLMSNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFV 190
+LPLLCHYPVKA+ +SND DYLSCKK+ECKKY NGKCV TC+GS+ FH INIRTDIEFV
Sbjct: 135 NLPLLCHYPVKAQFVSNDPDYLSCKKQECKKYENGKCVAVTCAGSLTFHAINIRTDIEFV 194
Query: 191 FFAGGFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDG 250
FFAGGF TPCIL R+NP++FA+P+ PLYGH+SS DST TSMR+TWVSGDKEPQQVQY +G
Sbjct: 195 FFAGGFQTPCILTRSNPVSFASPEKPLYGHISSIDSTGTSMRLTWVSGDKEPQQVQY-EG 253
Query: 251 KSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVG 310
KSE S+V TFTQ DMC T SPAKDFGWHDPGYIH+AVMTGL+PS+TFSY+YGSD VG
Sbjct: 254 KSEESEVVTFTQGDMC--TEKTSPAKDFGWHDPGYIHSAVMTGLQPSSTFSYKYGSDSVG 311
Query: 311 WSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSV 370
WSD+IQF+TPPAGGS E LRF+ +GDMGKAP D SAEHYIQPGS+SVI+A+A E+ +G++
Sbjct: 312 WSDQIQFRTPPAGGSDE-LRFIAFGDMGKAPRDASAEHYIQPGSISVIEAVAKELSSGNI 370
Query: 371 DSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSG 430
DSIFHIGDISYATGFLVEWDFFLH I+PVAS+VSYMTAIGNHE DY + S+Y++PDSG
Sbjct: 371 DSIFHIGDISYATGFLVEWDFFLHLINPVASQVSYMTAIGNHEMDYPDAE-SIYKTPDSG 429
Query: 431 GECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDR 490
GECGV Y TYFPMP ++KPWYSIEQ VHFT++STEHDW+E++EQYEWMK DMASVDR
Sbjct: 430 GECGVPYWTYFPMPTVQKEKPWYSIEQGSVHFTIISTEHDWAESAEQYEWMKNDMASVDR 489
Query: 491 SKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQS 550
SKTPWLIF GHR MY+S +S + F+ AVEPLLL NKVDL LFGHVHNYERTC++Y
Sbjct: 490 SKTPWLIFIGHRHMYTSTTSLGSSDFISAVEPLLLANKVDLVLFGHVHNYERTCAIYDHE 549
Query: 551 CLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGN 610
C MP KD +GIDTYD+SNY+APVQAVIGMAGF+LDKFPD+ D+ WSL RIS++GY+RG+
Sbjct: 550 CKGMPKKDEDGIDTYDNSNYTAPVQAVIGMAGFSLDKFPDDDDNAWSLSRISEYGYVRGH 609
Query: 611 ANKEEMKFEFVNSDTREVEDSFRIIKAK 638
A EE+K EFV S+TR+V DSFRII+++
Sbjct: 610 ATWEELKMEFVESNTRKVGDSFRIIRSQ 637
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296081295|emb|CBI17739.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/628 (71%), Positives = 534/628 (85%), Gaps = 7/628 (1%)
Query: 14 FVYVLF---IIILFPGSASSSLLHPWALNSSIEHQNYTAISPFRLLNRRFLSECPDSNPY 70
+V+ LF +++ FPG SSS P ++S E QNYTAIS FR+LNRR L ECPD+NPY
Sbjct: 671 WVFRLFLAAVLLSFPGPCSSSFSPPITISSIDEFQNYTAISDFRILNRRVLVECPDANPY 730
Query: 71 LQINVSKSSDLSDDEFVTVTVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVS 130
LQINVSK+S LSD+E++TVTVSGVLLPAE+DWVAMISPS S+V +C A Y+QTGD+S
Sbjct: 731 LQINVSKTSSLSDEEYLTVTVSGVLLPAETDWVAMISPSHSDVSSCPLAAIFYIQTGDIS 790
Query: 131 SLPLLCHYPVKAKLMSNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFV 190
+LPLLCHYPVKA+ +SND DYLSCKK+ECKKY NGKCV TC+GS+ FH INIRTDIEFV
Sbjct: 791 NLPLLCHYPVKAQFVSNDPDYLSCKKQECKKYENGKCVAVTCAGSLTFHAINIRTDIEFV 850
Query: 191 FFAGGFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDG 250
FFAGGF TPCIL R+NP++FA+P+ PLYGH+SS DST TSMR+TWVSGDKEPQQVQY +G
Sbjct: 851 FFAGGFQTPCILTRSNPVSFASPEKPLYGHISSIDSTGTSMRLTWVSGDKEPQQVQY-EG 909
Query: 251 KSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVG 310
KSE S+V TFTQ DMC T SPAKDFGWHDPGYIH+AVMTGL+PS+TFSY+YGSD VG
Sbjct: 910 KSEESEVVTFTQGDMC-GTEKTSPAKDFGWHDPGYIHSAVMTGLQPSSTFSYKYGSDSVG 968
Query: 311 WSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSV 370
WSD+IQF+TPPAGGS E LRF+ +GDMGKAP D SAEHYIQPGS+SVI+A+A E+ +G++
Sbjct: 969 WSDQIQFRTPPAGGSDE-LRFIAFGDMGKAPRDASAEHYIQPGSISVIEAVAKELSSGNI 1027
Query: 371 DSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSG 430
DSIFHIGDISYATGFLVEWDFFLH I+PVAS+VSYMTAIGNHE DY + S+Y++PDSG
Sbjct: 1028 DSIFHIGDISYATGFLVEWDFFLHLINPVASQVSYMTAIGNHEMDYPDAE-SIYKTPDSG 1086
Query: 431 GECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDR 490
GECGV Y TYFPMP ++KPWYSIEQ VHFT++STEHDW+E++EQYEWMK DMASVDR
Sbjct: 1087 GECGVPYWTYFPMPTVQKEKPWYSIEQGSVHFTIISTEHDWAESAEQYEWMKNDMASVDR 1146
Query: 491 SKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQS 550
SKTPWLIF GHR MY+S +S + F+ AVEPLLL NKVDL LFGHVHNYERTC++Y
Sbjct: 1147 SKTPWLIFIGHRHMYTSTTSLGSSDFISAVEPLLLANKVDLVLFGHVHNYERTCAIYDHE 1206
Query: 551 CLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGN 610
C MP KD +GIDTYD+SNY+APVQAVIGMAGF+LDKFPD+ D+ WSL RIS++GY+RG+
Sbjct: 1207 CKGMPKKDEDGIDTYDNSNYTAPVQAVIGMAGFSLDKFPDDDDNAWSLSRISEYGYVRGH 1266
Query: 611 ANKEEMKFEFVNSDTREVEDSFRIIKAK 638
A EE+K EFV S+TR+V DSFRII+++
Sbjct: 1267 ATWEELKMEFVESNTRKVGDSFRIIRSQ 1294
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255544093|ref|XP_002513109.1| Nucleotide pyrophosphatase/phosphodiesterase, putative [Ricinus communis] gi|223548120|gb|EEF49612.1| Nucleotide pyrophosphatase/phosphodiesterase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/609 (72%), Positives = 513/609 (84%), Gaps = 12/609 (1%)
Query: 38 LNSSIEHQNYTAISPFRLLNRRFLSECPDSNPYLQINVSKSS--------DLSDDEFVTV 89
LNS+I+H+NYT IS FR+LNRR L++C SNPYLQI + S LS++EFV+V
Sbjct: 34 LNSTIQHRNYTGISSFRVLNRRALTQCSFSNPYLQIKIVTSGNNNNNHNYTLSNEEFVSV 93
Query: 90 TVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVSSLPLLCHYPVKAKLMSNDR 149
TVSGVL P++ WVAMISPS+S+V C + Y+QTGD+ LPLLCHYPVKA+ +SND
Sbjct: 94 TVSGVLHPSKDHWVAMISPSNSDVSDCPLNKIQYIQTGDLGDLPLLCHYPVKAEYVSNDP 153
Query: 150 DYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFVFFAGGFDTPCILNRTNPIN 209
YLSCKK+ECKKY N KCVVT+CSG+IKFHVINIRTDIEFV FAGGF++PCIL R+ P+
Sbjct: 154 HYLSCKKQECKKYKNKKCVVTSCSGTIKFHVINIRTDIEFVLFAGGFESPCILARSAPLK 213
Query: 210 FANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGKSETSKVTTFTQDDMCNAT 269
F NP SPLYGH+SS DSTATSM+VTWVSG KEPQQV+YGD K S+VTTF+Q DMC ++
Sbjct: 214 FTNPNSPLYGHISSIDSTATSMKVTWVSGSKEPQQVEYGDDKKVASQVTTFSQKDMC-SS 272
Query: 270 ALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVL 329
L SPAKDFGWHDPGYIH+AVMTGL+PS+ ++YRYGS LVGWS + QF+TPPAGG++EV
Sbjct: 273 VLPSPAKDFGWHDPGYIHSAVMTGLKPSSNYTYRYGSALVGWSSQTQFRTPPAGGANEV- 331
Query: 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEW 389
RFL +GDMGKAP D SAEHYIQPGS+SV++AMA+EV +GSVDSIFHIGDISYATGFLVEW
Sbjct: 332 RFLAFGDMGKAPRDASAEHYIQPGSISVVEAMAEEVKSGSVDSIFHIGDISYATGFLVEW 391
Query: 390 DFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARD 449
DFFLHQI+P+ASRVSYMTAIGNHERDY+G+ G+VY +PDSGGECGVAYETYFPMP A+D
Sbjct: 392 DFFLHQITPLASRVSYMTAIGNHERDYIGT-GAVYGTPDSGGECGVAYETYFPMPTSAKD 450
Query: 450 KPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLS 509
KPWYSIEQ VHF VMSTEHDWS SEQY+WM+KDMASVDR +TPWL+F+GHRPMYSS
Sbjct: 451 KPWYSIEQGSVHFVVMSTEHDWSPGSEQYQWMRKDMASVDRWRTPWLVFTGHRPMYSSDL 510
Query: 510 SSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSN 569
SVD KF VEPLLL+ KVDL LFGHVHN+ER+CSVY+ CLAMPTKDANGIDTYDHSN
Sbjct: 511 LSVDGKFAGFVEPLLLEYKVDLVLFGHVHNFERSCSVYRAKCLAMPTKDANGIDTYDHSN 570
Query: 570 YSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTREVE 629
Y APVQAVIGMAGF+LD FP + WSL RISKFG+ R +A K E+K EFVNS TR+VE
Sbjct: 571 YKAPVQAVIGMAGFSLDNFPAFVPN-WSLKRISKFGFSRVHATKAELKLEFVNSHTRQVE 629
Query: 630 DSFRIIKAK 638
DSFRII+ +
Sbjct: 630 DSFRIIRKQ 638
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224075810|ref|XP_002304778.1| predicted protein [Populus trichocarpa] gi|222842210|gb|EEE79757.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/630 (70%), Positives = 518/630 (82%), Gaps = 22/630 (3%)
Query: 13 VFVYVLFIIILFPGSASSSLLHPWALNSSIEHQNYTAISPFRLLNRRFLSECPDSNPYLQ 72
+ + V I++ F +SS LL P L S+I HQNYTAIS FR+LNRR L +C NPYL+
Sbjct: 10 IILNVFTILLAFIPFSSSYLLPPSVLGSAIVHQNYTAISSFRVLNRRGLIQCRHPNPYLR 69
Query: 73 INVSKSSDL-SDDEFVTVTVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVSS 131
INVS + L SD+E+V VTVSGV LP++ DWVAMISPSDS+V++C ++ YVQTGD+S
Sbjct: 70 INVSSENGLLSDNEYVNVTVSGVFLPSDDDWVAMISPSDSDVKSCPLKKSRYVQTGDLSK 129
Query: 132 LPLLCHYPVKAKLMSNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFVF 191
LPLLCHYPVKA+ MSND DYL C K+ECKKY+N C V+ CSG+I FHVINIRTDIEFVF
Sbjct: 130 LPLLCHYPVKAQYMSNDPDYLKCTKQECKKYNNTNCEVSACSGTISFHVINIRTDIEFVF 189
Query: 192 FAGGFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGK 251
F+GGF+TPCIL R+ P+ F+NP PL+GH+SS DSTATSMR+TWVSG +E QQVQYGDG+
Sbjct: 190 FSGGFETPCILTRSGPMKFSNPNQPLHGHISSIDSTATSMRLTWVSGGEETQQVQYGDGE 249
Query: 252 SETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGW 311
+ TS TF+QDDMC + L SPA DFGWHDPGYIH+AVMTGLRPS T+SYRYGSD VGW
Sbjct: 250 TLTSTAKTFSQDDMC-TSVLPSPANDFGWHDPGYIHSAVMTGLRPSTTYSYRYGSDSVGW 308
Query: 312 SDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVD 371
SDKIQF+TPPAGGS E L+FL +GDMGKAPLD S EHYIQ V +G+VD
Sbjct: 309 SDKIQFRTPPAGGSDE-LKFLAFGDMGKAPLDPSVEHYIQ-------------VKSGNVD 354
Query: 372 SIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGG 431
SIFHIGDISYATGFLVEWDFFLH ISP+AS+VSYMTAIGNHERDY+G SGSVY +PDSGG
Sbjct: 355 SIFHIGDISYATGFLVEWDFFLHLISPMASQVSYMTAIGNHERDYIG-SGSVYITPDSGG 413
Query: 432 ECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRS 491
ECGV YETYFPMP PA+DKPWYSIEQ +HFTV+STEHDW+ENSEQYEWM KDM SVDRS
Sbjct: 414 ECGVPYETYFPMPTPAKDKPWYSIEQGSIHFTVISTEHDWTENSEQYEWMTKDMGSVDRS 473
Query: 492 KTPWLIFSGHRPMYSSLSS---SVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYK 548
KTPWLIF+GHRPMYSS ++ +VD++F AVEPLLL +KVDLA FGHVHNYERTCSVY+
Sbjct: 474 KTPWLIFTGHRPMYSSSTNRLFNVDDRFSKAVEPLLLQHKVDLAFFGHVHNYERTCSVYQ 533
Query: 549 QSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLR 608
+CLAMPTKD NGIDTYDHSNYSAPVQAVIGMAGF+L KF +WSL RIS FGYLR
Sbjct: 534 SNCLAMPTKDRNGIDTYDHSNYSAPVQAVIGMAGFSLTKFSKPG--SWSLTRISDFGYLR 591
Query: 609 GNANKEEMKFEFVNSDTREVEDSFRIIKAK 638
G+A KE++ EFVN++TR+V+DSFRI K +
Sbjct: 592 GHATKEDINLEFVNANTRQVQDSFRITKRQ 621
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356529842|ref|XP_003533496.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/629 (68%), Positives = 521/629 (82%), Gaps = 11/629 (1%)
Query: 15 VYVLFIIILFPGSASSSLLHPWAL-----NSSIEHQNYTAISPFRLLNRRFLSECPDSNP 69
V +L ++ L ++S L P L N+++ H N+TA+S FR++NRR L C SNP
Sbjct: 16 VSILLVLFLSLSCSTSETLTPSLLDFVVTNTTVLHSNFTAVSDFRMINRRILKGCSASNP 75
Query: 70 YLQINVSKSSDLSDDEFVTVTVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDV 129
++++NV+ +S SDDEFVTVTV+GV P+ DWVAMISPS S+V+ C+ E Y+QTGD
Sbjct: 76 FVKVNVTSNSSFSDDEFVTVTVTGVSSPSAGDWVAMISPSTSDVKNCILNEVYYLQTGDT 135
Query: 130 SSLPLLCHYPVKAKLMSNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEF 189
+ LPLLCHYPVKA+ M ND +YLSCKKKECK + NGKC V+TCSGS++FHVINIR+DIEF
Sbjct: 136 AKLPLLCHYPVKAQYMKNDPNYLSCKKKECKTFQNGKCDVSTCSGSLQFHVINIRSDIEF 195
Query: 190 VFFAGGFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGD 249
VFF+GGF PC++ R+ P++FANPK PLYGH+SS DST TSMR+TWVSGDKEPQQ+QYG+
Sbjct: 196 VFFSGGFVKPCLVGRSTPVSFANPKRPLYGHISSIDSTGTSMRLTWVSGDKEPQQIQYGN 255
Query: 250 GKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLV 309
GK+ TS VTTF+QDDMC++T L SPAKDFGWHDPGYIH+A+MTGL+PS+TFSYRYGS V
Sbjct: 256 GKTVTSAVTTFSQDDMCSST-LPSPAKDFGWHDPGYIHSALMTGLKPSSTFSYRYGSGSV 314
Query: 310 GWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGS 369
GWS++I+F TPPAGGS E LRF+ +GDMGK PLD S EHYIQPG+LSVIKA+A++V++ +
Sbjct: 315 GWSEEIKFSTPPAGGSDE-LRFIAFGDMGKTPLDASEEHYIQPGALSVIKAIANDVNSNN 373
Query: 370 VDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDS 429
++S+FHIGDISYATGFL EWD+FLH I+PVASR+SYMTAIGNHERDY+ SGSVY +PDS
Sbjct: 374 INSVFHIGDISYATGFLAEWDYFLHLINPVASRISYMTAIGNHERDYI-DSGSVYVTPDS 432
Query: 430 GGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVD 489
GGECGV YETYFPMP A+DKPWYSIEQ VHFTV+STEH WSENSEQY WM+KDMASV+
Sbjct: 433 GGECGVPYETYFPMPTSAKDKPWYSIEQGSVHFTVISTEHAWSENSEQYVWMQKDMASVN 492
Query: 490 RSKTPWLIFSGHRPMYSSLSSSV--DNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVY 547
R KTPWLIF GHRPMY++ V +NKF+ AVEPLLL+NKVDL LFGHVHNYERTCSV+
Sbjct: 493 RQKTPWLIFMGHRPMYTTNHGFVPSENKFMKAVEPLLLENKVDLVLFGHVHNYERTCSVF 552
Query: 548 KQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYL 607
+ C AMPTKD NG+DTYD NYSAPV AVIGMAGFTLDKF +N + +WSL RIS+FGYL
Sbjct: 553 QNECKAMPTKDKNGMDTYDGRNYSAPVHAVIGMAGFTLDKFSNNVE-SWSLKRISEFGYL 611
Query: 608 RGNANKEEMKFEFVNSDTREVEDSFRIIK 636
R +A + ++ EFV SDTREV+DSF I K
Sbjct: 612 RAHATRNDLNLEFVISDTREVKDSFHITK 640
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544306|ref|XP_003540594.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/627 (68%), Positives = 524/627 (83%), Gaps = 11/627 (1%)
Query: 17 VLFIIILFPGSASS-----SLLHPWALNSSIEHQNYTAISPFRLLNRRFLSECPDSNPYL 71
+L + L G ++S SLL N+++ H N+T +S FR++NRR L +C SNP++
Sbjct: 13 ILLVFFLSLGCSTSETLTRSLLDFVVTNTTVLHSNFTLVSEFRMINRRILKDCSASNPFV 72
Query: 72 QINVSKSSDLSDDEFVTVTVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVSS 131
++NV+ +S LSDDEFVTVTV+GV P+ SDWVAMISPS S+V+TC+ EA Y+QTGD +
Sbjct: 73 KVNVTSNSSLSDDEFVTVTVTGVSNPSVSDWVAMISPSTSDVKTCILNEAFYLQTGDTAK 132
Query: 132 LPLLCHYPVKAKLMSNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFVF 191
LPLLCHYPVKA+ M ND +YLSCKKKECK + NGKC V+TCSGS++FHV+NIR+DIEFVF
Sbjct: 133 LPLLCHYPVKAQYMKNDPNYLSCKKKECKTFQNGKCAVSTCSGSLQFHVVNIRSDIEFVF 192
Query: 192 FAGGFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGK 251
F+GGF PC++ R+ P++FANPK PLYGHLSS DST TSMR+TWVSGDKEPQQ+QYG+GK
Sbjct: 193 FSGGFVEPCLVGRSTPVSFANPKRPLYGHLSSIDSTGTSMRLTWVSGDKEPQQIQYGNGK 252
Query: 252 SETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGW 311
+ S VTTF+QDDMC ++AL SPAKDFGWHDPGYIH+A+MTGL+PS+TFSYRYGS VGW
Sbjct: 253 TVASAVTTFSQDDMC-SSALPSPAKDFGWHDPGYIHSALMTGLKPSSTFSYRYGSGWVGW 311
Query: 312 SDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVD 371
S++I+F TPPAGGS E LRF+ +GDMGK PLD S EHYIQPG+LSVIKA+A++V++ +V+
Sbjct: 312 SEQIKFSTPPAGGSDE-LRFIAFGDMGKTPLDASEEHYIQPGALSVIKAIANDVNSNNVN 370
Query: 372 SIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGG 431
S+FHIGDISYATGFL EWD+FLH I+PVASR+SYMTAIGNHERDY+ SGSVY +PDSGG
Sbjct: 371 SVFHIGDISYATGFLAEWDYFLHLINPVASRISYMTAIGNHERDYI-DSGSVYVTPDSGG 429
Query: 432 ECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRS 491
ECGV YETYFPMP A+DKPWYSIEQ VHFTV+STEHDWSENSEQYEW++KDMASV+R
Sbjct: 430 ECGVPYETYFPMPTSAKDKPWYSIEQGSVHFTVISTEHDWSENSEQYEWVQKDMASVNRQ 489
Query: 492 KTPWLIFSGHRPMYSSLSSSV--DNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQ 549
KTPWLIF GHRPMY++ + +NKF++AVEPLLL+NKVDL LFGHVHNYERTCS+++
Sbjct: 490 KTPWLIFMGHRPMYTTNHGFLPSENKFMEAVEPLLLENKVDLVLFGHVHNYERTCSLFQN 549
Query: 550 SCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRG 609
C AMP KD NG+DTYD NYSAPV AVIGMAGFTLDKF N +WSL RIS+FGYLR
Sbjct: 550 ECKAMPAKDKNGVDTYDGRNYSAPVHAVIGMAGFTLDKFSSNVK-SWSLKRISEFGYLRA 608
Query: 610 NANKEEMKFEFVNSDTREVEDSFRIIK 636
+A + ++ EFV SDTREV+DSFRI K
Sbjct: 609 HATRNDLNLEFVISDTREVKDSFRITK 635
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357470893|ref|XP_003605731.1| Nucleotide pyrophosphatase/phosphodiesterase [Medicago truncatula] gi|355506786|gb|AES87928.1| Nucleotide pyrophosphatase/phosphodiesterase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/595 (71%), Positives = 507/595 (85%), Gaps = 6/595 (1%)
Query: 44 HQNYTAISPFRLLNRRFLSECPDSNPYLQINVSKSSDLSDDEFVTVTVSGVLLPAESDWV 103
HQN+TA+S FRL+NRR L++C +PYL++N++ +S L D+EFVTVTV+GV P + DWV
Sbjct: 21 HQNFTALSDFRLINRRILNDCSHLSPYLKLNITSNSKLLDEEFVTVTVTGVSKPRDGDWV 80
Query: 104 AMISPSDSNVETCLSAEAMYVQTGDVSSLPLLCHYPVKAKLMSNDRDYLSCKKKECKKYS 163
AMISPS+SNV+ CL E Y+QTGD + LPLLCHYPVKA+ + ND DY+SCKKKECKK
Sbjct: 81 AMISPSNSNVKACLLNEFYYLQTGDTAKLPLLCHYPVKAQYLKNDPDYMSCKKKECKKEQ 140
Query: 164 NGKCVVTTCSGSIKFHVINIRTDIEFVFFAGGFDTPCILNRTNPINFANPKSPLYGHLSS 223
NGKC VTTCSGSIKFHVINIR+DIEFVFF GGF TPC++ R+ P++FANPK PLYGH+SS
Sbjct: 141 NGKCSVTTCSGSIKFHVINIRSDIEFVFFTGGFLTPCLVGRSTPLSFANPKKPLYGHISS 200
Query: 224 SDSTATSMRVTWVSGDKEPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDP 283
DSTATSMR+TWVSGDKEPQQ+QYG+GK+ TS VTTF+Q+DMC ++ + SPAKDFGWHDP
Sbjct: 201 IDSTATSMRLTWVSGDKEPQQIQYGNGKTVTSAVTTFSQEDMC-SSVVPSPAKDFGWHDP 259
Query: 284 GYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLD 343
GYIH+A+MTGL+PS+ +SYRYGS+ WS++ +F TPPAGGS E L+F+++GDMGK PLD
Sbjct: 260 GYIHSALMTGLKPSSAYSYRYGSNSADWSEQTKFSTPPAGGSDE-LKFISFGDMGKTPLD 318
Query: 344 DSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRV 403
S EHYIQPG+LSVIKA+A+EV++ +V+S+FHIGDISYATGFL EWDFFL+ ISPVASRV
Sbjct: 319 ASEEHYIQPGALSVIKAIANEVNSNNVNSVFHIGDISYATGFLAEWDFFLNLISPVASRV 378
Query: 404 SYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFT 463
SYMTAIGNHERDY+ SGSVY +PDSGGECGV YETYFPMP A+DKPWYSIEQ VHFT
Sbjct: 379 SYMTAIGNHERDYI-DSGSVYVTPDSGGECGVPYETYFPMPTAAKDKPWYSIEQGSVHFT 437
Query: 464 VMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLS--SSVDNKFVDAVE 521
V+STEHDWSENSEQY W+KKD+ASV+R TPWLIF GHRPMY+S + SS D KF++AVE
Sbjct: 438 VISTEHDWSENSEQYNWIKKDLASVNRQHTPWLIFMGHRPMYTSNNGFSSKDQKFINAVE 497
Query: 522 PLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMA 581
PLLL NKVDL LFGHVHNYERTCSVY+ C A+P KD G+DTYD+ NYSAPV AVIGMA
Sbjct: 498 PLLLQNKVDLVLFGHVHNYERTCSVYQNKCKAIPIKDQKGVDTYDNRNYSAPVHAVIGMA 557
Query: 582 GFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTREVEDSFRIIK 636
GF LDKF +NA+ +WSL RIS+FGYLR +A + ++ EFV SDTREV+DSFRI K
Sbjct: 558 GFALDKFSNNAE-SWSLKRISEFGYLRAHATRNDLSLEFVTSDTREVKDSFRITK 611
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147784700|emb|CAN63695.1| hypothetical protein VITISV_026818 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/633 (66%), Positives = 509/633 (80%), Gaps = 12/633 (1%)
Query: 13 VFVYVLF--IIILFP--GSASSSLLHPWALNSSIEHQNYTAISPFRLLNRRFLSECPDSN 68
VF LF +I+ FP S+SSS L P +S QN+TAIS FRLLNRR L EC + N
Sbjct: 9 VFGLFLFDALILFFPISCSSSSSFLPPLTASSIDXLQNHTAISDFRLLNRRILKECXNPN 68
Query: 69 PYLQINVSKSSDLSDDEFVTVTVSGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGD 128
PYL+I VSK+S L+D+E++TVTVSGVL+P +DWVAM+SPSDS++ C ++ Y+QTGD
Sbjct: 69 PYLEITVSKNSSLADEEYLTVTVSGVLIPEXTDWVAMVSPSDSDLSGCPLSKFYYIQTGD 128
Query: 129 VSSLPLLCHYPVKAKLMSNDRDYLSCKKKECKKYSN-GKCVVTTCSGSIKFHVINIRTDI 187
SSLPLLCHYPVKA+ +S+D YL+C KKEC+ Y + G C+V TCS S+ FHV+NIRTDI
Sbjct: 129 FSSLPLLCHYPVKAQFVSHDPGYLNCTKKECQAYDDDGTCLVNTCSASLTFHVVNIRTDI 188
Query: 188 EFVFFAGGFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQY 247
EFVFFAG FD PCI R+ P++FANPK PLYGHLSS DST TSMR+TWVSGDKEPQ VQY
Sbjct: 189 EFVFFAGAFDRPCIXTRSIPVSFANPKMPLYGHLSSIDSTGTSMRLTWVSGDKEPQLVQY 248
Query: 248 GDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSD 307
+GKSE S+VTTFT++DMC + + +PAKDFGWHDPGYIH+A+MTGL+PS FSYRYG D
Sbjct: 249 -EGKSEQSEVTTFTREDMCGSAKI-TPAKDFGWHDPGYIHSAMMTGLQPSRNFSYRYGCD 306
Query: 308 LVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN 367
VGWS QF+TPPAGGS E LRF+ +GDMGK+P D+S EH+IQPGS+SVI+ +A EV +
Sbjct: 307 SVGWSKLTQFRTPPAGGSDE-LRFIAFGDMGKSPRDNSTEHFIQPGSISVIEEIAKEVSS 365
Query: 368 GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESP 427
G+VDSIFHIGDISYATGFLVEWDFFL+ I+PVAS+VSYMTAIGNHE DY GS S++ +P
Sbjct: 366 GNVDSIFHIGDISYATGFLVEWDFFLNLINPVASQVSYMTAIGNHEMDYPGSV-SIHHTP 424
Query: 428 DSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMAS 487
DSGGECG+ Y TYFPMP + KPWYSIEQ VHFT++STEHD SE+SEQYEW+K+DMAS
Sbjct: 425 DSGGECGIPYWTYFPMPTMEKQKPWYSIEQGSVHFTIISTEHDCSEDSEQYEWLKEDMAS 484
Query: 488 VDRSKTPWLIFSGHRPMYSSLSSSV---DNKFVDAVEPLLLDNKVDLALFGHVHNYERTC 544
V+RS+TPWLI GHR MY+SL S + D FV AVEPLLL NKVDL L GHVHNYERTC
Sbjct: 485 VNRSRTPWLIVMGHRHMYTSLKSGLSRPDFMFVSAVEPLLLANKVDLVLVGHVHNYERTC 544
Query: 545 SVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKF 604
++Y CLAMP KD +G YD+SNY+APVQAVIGMAGF+LDKFP N ++ WSL RIS++
Sbjct: 545 AIYNNECLAMPGKDWSGTAVYDNSNYTAPVQAVIGMAGFSLDKFPANIENNWSLSRISEY 604
Query: 605 GYLRGNANKEEMKFEFVNSDTREVEDSFRIIKA 637
GY+RG+A +EE++ EFV S V DSFRIIK+
Sbjct: 605 GYVRGHATREELRMEFVESKXGTVGDSFRIIKS 637
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449885|ref|XP_002267949.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/610 (68%), Positives = 499/610 (81%), Gaps = 10/610 (1%)
Query: 32 LLHPWALNSSIEHQNYTAISPFRLLNRRFLSECPDSNPYLQINVSKSSDLSDDEFVTVTV 91
L P +S + QN+TAIS FRLLNRR L ECP+ NPYL+I VSK+S L+D+E++TVTV
Sbjct: 36 FLPPLTASSIDDLQNHTAISDFRLLNRRILKECPNPNPYLEITVSKNSSLADEEYLTVTV 95
Query: 92 SGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVSSLPLLCHYPVKAKLMSNDRDY 151
SGVL+P E+DWVAM+SPSDS++ C ++ Y+QTGD SSLPLLCHYPVKA+ +S+D Y
Sbjct: 96 SGVLIPEETDWVAMVSPSDSDLSGCPLSKFYYIQTGDFSSLPLLCHYPVKAQFVSHDPGY 155
Query: 152 LSCKKKECKKY-SNGKCVVTTCSGSIKFHVINIRTDIEFVFFAGGFDTPCILNRTNPINF 210
L+C KKEC+ Y +G C+V TCS S+ FHV+NIRTDIEFVFFAG FD PCI R+ P++F
Sbjct: 156 LNCTKKECQAYDDDGTCLVNTCSASLTFHVVNIRTDIEFVFFAGAFDRPCIWTRSIPVSF 215
Query: 211 ANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGKSETSKVTTFTQDDMCNATA 270
ANPK PLYGHLSS DST TSMR+TWVSGDKEPQ VQY +GKSE S+VTTFT++DMC+A
Sbjct: 216 ANPKMPLYGHLSSIDSTGTSMRLTWVSGDKEPQLVQY-EGKSEQSEVTTFTREDMCSAKI 274
Query: 271 LQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLR 330
+PAKDFGWHDPGYIH+A+MTGL+PS FSYRYG D VGWS QF+TPPAGGS E LR
Sbjct: 275 --TPAKDFGWHDPGYIHSAMMTGLQPSRNFSYRYGCDSVGWSKLTQFRTPPAGGSDE-LR 331
Query: 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWD 390
F+ +GDMGK+P D+S EH+IQPGS+SVI+ +A EV +G+VDSIFHIGDISYATGFLVEWD
Sbjct: 332 FIAFGDMGKSPRDNSTEHFIQPGSISVIEEIAKEVSSGNVDSIFHIGDISYATGFLVEWD 391
Query: 391 FFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDK 450
FFL+ I+PVAS+VSYMTAIGNHE DY GS S++ +PDSGGECG+ Y TYFPMP + K
Sbjct: 392 FFLNLINPVASQVSYMTAIGNHEMDYPGSV-SIHHTPDSGGECGIPYWTYFPMPTMEKQK 450
Query: 451 PWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSS 510
PWYSIEQ VHFT++STEHD SE+SEQYEW+K+DMASV+RS+TPWLI GHR MY+SL S
Sbjct: 451 PWYSIEQGSVHFTIISTEHDCSEDSEQYEWLKEDMASVNRSRTPWLIVMGHRHMYTSLKS 510
Query: 511 SV---DNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDH 567
+ D FV AVEPLLL NKVDL L GHVHNYERTC++Y CLAMP KD +G YD+
Sbjct: 511 GLSRPDFMFVSAVEPLLLANKVDLVLVGHVHNYERTCAIYNNECLAMPGKDWSGTAVYDN 570
Query: 568 SNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTRE 627
SNY+APVQAVIGMAGF+LDKFP N ++ WSL RIS++GY+RG+A +EE++ EFV S T
Sbjct: 571 SNYTAPVQAVIGMAGFSLDKFPANINN-WSLSRISEYGYVRGHATREELRMEFVESKTGT 629
Query: 628 VEDSFRIIKA 637
V DSFRIIK+
Sbjct: 630 VGDSFRIIKS 639
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445160|ref|XP_004140341.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Cucumis sativus] gi|449508855|ref|XP_004163428.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/615 (65%), Positives = 488/615 (79%), Gaps = 11/615 (1%)
Query: 34 HPWALNSSIEHQNYTAISPFRLLNRRFLSECP-DSNPYLQINV-SKSSDLSDDEFVTVTV 91
HP A +S+ H+NYTAIS FRLLNRR CP + N ++ I+V SKS+ L ++EFV VTV
Sbjct: 32 HPLAAHSANLHRNYTAISDFRLLNRRTFFSCPTNRNFFINIDVISKSNSLLNEEFVNVTV 91
Query: 92 SGVLLPAESDWVAMISPSDSNVETCLSAEAMYVQTGDVSSLPLLCHYPVKAKLMSNDRDY 151
G+ P++ W+AMI+PS++NVE C + +Y QTGD++ LPLLCHYPVKA +S+D DY
Sbjct: 92 GGITNPSKDHWIAMITPSNANVEDCSVSSILYGQTGDLTLLPLLCHYPVKAAYLSSDPDY 151
Query: 152 LSCKKKECKKYSNG-KCVVTTCSGSIKFHVINIRTDIEFVFFAGGFDTPCILNRTNPINF 210
L CKKK C G KC TC ++ FH+IN RTD+EF F GGF TPC+L ++ ++F
Sbjct: 152 LPCKKKGCVVPPVGDKCEEPTCIATLSFHIINFRTDVEFFLFDGGFLTPCLLYKSKTLSF 211
Query: 211 ANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYG-DGKSETSKVTTFTQDDMCNAT 269
NP +PLYGHLSS DSTATSMR++WVSGD EPQQVQY DGK +TS+V+TF+Q+DMCNA+
Sbjct: 212 QNPNAPLYGHLSSIDSTATSMRLSWVSGDGEPQQVQYDEDGKIQTSQVSTFSQNDMCNAS 271
Query: 270 ALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVL 329
LQSPAKDFGWHDPG+IHTA+MT L+PS T+SY+YGS+ VGWS++ F+TPPA G
Sbjct: 272 FLQSPAKDFGWHDPGFIHTAIMTQLKPSTTYSYKYGSEKVGWSEETTFRTPPAAGDETDF 331
Query: 330 RFLTYGDMGKAPLDDS-AEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVE 388
F+ +GDMGKAPLD S AEHYIQPGS+SV++AM +EV+ G +D +FHIGDISYATGFLVE
Sbjct: 332 SFIAFGDMGKAPLDSSSAEHYIQPGSISVVEAMKEEVERGEIDGVFHIGDISYATGFLVE 391
Query: 389 WDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPAR 448
WDFFLH I+P+ASR+ YMTAIGNHERDYL S+ SVY PDSGGECGV YETY MPI +
Sbjct: 392 WDFFLHLINPIASRLPYMTAIGNHERDYLQST-SVYTFPDSGGECGVPYETYLQMPISGK 450
Query: 449 DKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSL 508
D+PWYSIE A +HFT++STEHD++ NS QYEWMK DMASVDRS+TPWLIF+GHRPMYSS+
Sbjct: 451 DQPWYSIEMASIHFTIISTEHDFTINSPQYEWMKNDMASVDRSRTPWLIFAGHRPMYSSI 510
Query: 509 SSS-----VDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGID 563
S S VD FV AVEPLLL NKVDL LFGHVH+YERTCS++ C MP KD NGID
Sbjct: 511 SGSLLIPSVDPSFVAAVEPLLLQNKVDLVLFGHVHSYERTCSIFNSICKGMPLKDINGID 570
Query: 564 TYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNS 623
TYDH+NY+AP+ AVIGMAGFTLD+FP +WSL R+SKFGYLRG+A KE++ FE VN+
Sbjct: 571 TYDHNNYTAPLHAVIGMAGFTLDQFPLLGIESWSLSRVSKFGYLRGHATKEKLSFEMVNA 630
Query: 624 DTREVEDSFRIIKAK 638
TREVEDSF IIKA+
Sbjct: 631 ITREVEDSFNIIKAQ 645
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 638 | ||||||
| TAIR|locus:2023870 | 613 | AT1G13750 [Arabidopsis thalian | 0.719 | 0.748 | 0.396 | 1.3e-90 | |
| TAIR|locus:2177547 | 611 | PAP27 "purple acid phosphatase | 0.747 | 0.780 | 0.365 | 4.4e-90 | |
| TAIR|locus:2117353 | 615 | PAP24 "purple acid phosphatase | 0.827 | 0.858 | 0.347 | 5.2e-81 | |
| DICTYBASE|DDB_G0281861 | 594 | DDB_G0281861 [Dictyostelium di | 0.404 | 0.434 | 0.428 | 1.3e-72 | |
| TAIR|locus:2014839 | 656 | PAP2 "AT1G13900" [Arabidopsis | 0.615 | 0.599 | 0.350 | 1.3e-59 | |
| TAIR|locus:2063777 | 651 | PAP9 "purple acid phosphatase | 0.548 | 0.537 | 0.348 | 1.1e-52 | |
| DICTYBASE|DDB_G0282559 | 431 | dduA "N-terminal purple acid p | 0.496 | 0.735 | 0.274 | 1.4e-24 | |
| TAIR|locus:2098500 | 532 | PAP15 "purple acid phosphatase | 0.394 | 0.473 | 0.310 | 3.8e-23 | |
| WB|WBGene00013654 | 417 | Y105C5B.15 [Caenorhabditis ele | 0.537 | 0.822 | 0.274 | 1.4e-22 | |
| WB|WBGene00219316 | 496 | F21A3.11 [Caenorhabditis elega | 0.493 | 0.635 | 0.289 | 2.9e-22 |
| TAIR|locus:2023870 AT1G13750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 844 (302.2 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 200/505 (39%), Positives = 276/505 (54%)
Query: 156 KKECKKYSNGKCVVTTCSGSIKFHVINIRTDIEFVFFAGGFDTPCILNRTNPINFANPKS 215
K + +SN + T +GS+K +IN R+D F F+GG P ++ +N + F NP +
Sbjct: 111 KFQYANFSNPR-YTNTGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNA 169
Query: 216 PLYGHLSSSDSTATSMRVTWVSGD----KEPQQ---VQYGDGKSETSKVTTFTQDDMCNA 268
P+Y L+ M VTW SG EP V+ G+ K + TF ++ MC A
Sbjct: 170 PVYPRLALGKEW-DEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCGA 228
Query: 269 TALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVG----WSDKIQFKTPPAGG 324
PA+ GW DPGYIHTA + L P++ ++YR G L WS + QFK+ P G
Sbjct: 229 -----PARTVGWRDPGYIHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPG 283
Query: 325 SSEVLRFLTYGDMGKAPLDDSAEHY-IQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT 383
+ V + + +GDMGKA +D S+E+ Q SL+ K + ++ D++FHIGDI YA
Sbjct: 284 QNSVQQVVIFGDMGKAEVDGSSEYNDFQRASLNTTKQLIKDLKK--TDAVFHIGDICYAN 341
Query: 384 GFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPM 443
G+L +WD F+ QI P+AS V YM A GNHER + +SGS YE DSGGECGV ET F +
Sbjct: 342 GYLSQWDQFIAQIEPIASTVPYMIASGNHERVW-PNSGSFYEGLDSGGECGVPAETMFYV 400
Query: 444 PIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRP 503
P R K WYS + F V TEHDW E +EQY +++ +ASVDR K PWLIF HR
Sbjct: 401 PAQNRAKVWYSSDYGMFRFCVADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRV 460
Query: 504 M-YSSLSS-SVDNKFVD-----AVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPT 556
+ YSS + + F + +++ L KVD+A++GH HNYERTC VY+ C +
Sbjct: 461 LGYSSTYFYAEEGSFAEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTS--- 517
Query: 557 KDANGIDTYDHSNYSAPVQAVI----GMAGFTLDKFPDNADHTWSLIRISKFGYLRGNA- 611
++ SNY AP+ I G G L +F D WSL R +G+L+ A
Sbjct: 518 --------HEKSNYKAPLNGTIHIVAGGGGAGLAEFSD-LQPNWSLFRDYDYGFLKLTAI 568
Query: 612 NKEEMKFEFVNSDTREVEDSFRIIK 636
+ + FE+ S V DSF I K
Sbjct: 569 DHSNLLFEYKKSSDGRVHDSFTISK 593
|
|
| TAIR|locus:2177547 PAP27 "purple acid phosphatase 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 835 (299.0 bits), Expect = 4.4e-90, Sum P(2) = 4.4e-90
Identities = 194/531 (36%), Positives = 274/531 (51%)
Query: 126 TGDVSSLPLLCHYPVKAKLMSNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFHVINIRT 185
T D P +C PVK + DY+ G V +KF +IN R
Sbjct: 95 TDDKEIAPFICSAPVKYMYAKSSPDYMK----------TGNAV-------LKFMLINQRA 137
Query: 186 DIEFVFFAGGFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQV 245
D F F GG P +++ +N ++F NPK+P+Y L+ M VTW SG + V
Sbjct: 138 DFSFALFTGGLSNPTLVSVSNHVSFINPKAPVYPRLALGKKW-DEMTVTWTSGYNIGEAV 196
Query: 246 QYGDG--KSETSK-----VTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSA 298
+ + K S+ TFT++ MC A PA+ GW DPG+IHTA + L P+
Sbjct: 197 PFVEWSRKGTRSRRSPAGTLTFTRNSMCGA-----PARTVGWRDPGFIHTASLKDLWPNL 251
Query: 299 TFSYRYGSDLVG----WSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHY-IQPG 353
++YR G +L+ WS FK+ P G + R + +GDMGK D S E+ QPG
Sbjct: 252 KYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSNEYNDYQPG 311
Query: 354 SLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHE 413
SL+ + ++ N +D +FHIGDI+YA G++ +WD F Q+ P+AS V YM A GNHE
Sbjct: 312 SLNTTDQLIKDLKN--IDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMVASGNHE 369
Query: 414 RDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSE 473
RD+ SGS Y DSGGECGV ET F P + K WYS + F V TEHDW E
Sbjct: 370 RDW-PDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTEHDWRE 428
Query: 474 NSEQYEWMKKDMASVDRSKTPWLIFSGHRPM-YSSLS-SSVDNKFVD-----AVEPLLLD 526
SEQY+++++ +ASVDR PWLIF HR + YS+ + F + +++ L
Sbjct: 429 GSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQKLWQK 488
Query: 527 NKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLD 586
KVD+A +GHVHNYERTC +Y+ C+ +G + + V+G AG L
Sbjct: 489 YKVDIAFYGHVHNYERTCPIYQNQCMDNEKSHYSGA-------FKGTIHVVVGGAGSHLS 541
Query: 587 KFPDNADHTWSLIRISKFGYLRGNA-NKEEMKFEFVNSDTREVEDSFRIIK 636
F + WS+ R +G+++ A + + FE+ S V DSF I +
Sbjct: 542 SF-SSLKPKWSIFRDYDYGFVKLTAFDHSSLLFEYKKSSNGAVHDSFTIFR 591
|
|
| TAIR|locus:2117353 PAP24 "purple acid phosphatase 24" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 207/595 (34%), Positives = 304/595 (51%)
Query: 72 QINVSKSSDLSDDEFVTVTVSGVLLPAE---SDWV--AMISP---SDSNVETCLSAEA-- 121
QINV ++S L+ D V + S +L ++ ++WV A+ +P SD + A+
Sbjct: 34 QINVYETS-LALDSSVKLHASPQVLGSQGEDTEWVNLAISNPKPTSDDWIGVFSPAKFDS 92
Query: 122 --MYVQTGDVSSLPLLCHYPVKAKLMSNDRDYLSCKKKECKKYSNGKCVVTTCSGSIKFH 179
+ +G P +C P+K ++ DY+ K N VT +KF
Sbjct: 93 GNCWPTSGGKEKTPYICSSPIKYMYCNSHPDYM--------KSGN----VT-----LKFQ 135
Query: 180 VINIRTDIEFVFFAGGFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSG- 238
+IN R D+ F F+ G P +L +NP+ F NPK+P+Y L+ + M VTW SG
Sbjct: 136 IINQRADVSFALFSNGVQEPHLLGVSNPVAFFNPKAPVYPRLALGKNW-DEMTVTWTSGY 194
Query: 239 --DKEPQQVQYG----DGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292
D+ +++ + + TF ++ MC +PA+ GW DPG+ HT+ +
Sbjct: 195 NIDEAVPFIEWSAKGLPARRSPAGTLTFNRNSMCG-----NPARGVGWRDPGFFHTSFLK 249
Query: 293 GLRPSATFSYRYGSDLVG----WSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEH 348
L P+ + YR G DLV WS F + P G R + +GDMGK D S E+
Sbjct: 250 ELWPNREYIYRLGHDLVNGSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEY 309
Query: 349 Y-IQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407
QPGSL+ + ++ + +D +FHIGD++Y+ G+L +WD F Q+ P+AS V YM
Sbjct: 310 NDYQPGSLNTTDQVIKDLKD--IDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMI 367
Query: 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMST 467
A GNHERD+ +GS Y DSGGECGV ET F P R K WY + F V +
Sbjct: 368 ASGNHERDW-PDTGSFYAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADS 426
Query: 468 EHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPM-YSSLS-SSVDNKFVD-----AV 520
EHDW E +EQY++++ +A+VDR PWLIF HR + YS+ + F + ++
Sbjct: 427 EHDWREGTEQYKFIENCLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESL 486
Query: 521 EPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGM 580
+ L KVDLA +GHVHNYERTC +Y+ C+ N D Y + + V+G
Sbjct: 487 QKLWQKYKVDLAFYGHVHNYERTCPIYESQCVN------NDKDHYS-GTFKGTIHVVVGG 539
Query: 581 AGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEE-MKFEFVNSDTREVEDSFRI 634
AG L F WSL+R FG+++ A+ + FE+ S T +V DSF I
Sbjct: 540 AGSHLSPFSSLVPK-WSLVRDYDFGFVKLTASDHSSLLFEYKKSSTGQVYDSFNI 593
|
|
| DICTYBASE|DDB_G0281861 DDB_G0281861 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 518 (187.4 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
Identities = 119/278 (42%), Positives = 156/278 (56%)
Query: 372 SIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGS----SGSVYESP 427
S+ HIGDISYA G WD+F+ + P+ S+V YM +IGNHE D++G S S Y S
Sbjct: 324 SVHHIGDISYARGKAFIWDYFMDSMQPIVSKVPYMVSIGNHEYDFIGQPFAPSWSNYGS- 382
Query: 428 DSGGECGVAYETYFPMPIPARDKP---WYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKD 484
DSGGECGV Y F M A D W+S E +HFTVMS EHD+ S Q+EW+ D
Sbjct: 383 DSGGECGVPYSKRFHMT-GAEDSTRNLWFSYENGPIHFTVMSAEHDFLPGSPQFEWLNND 441
Query: 485 MASVDRSKTPWLIFSGHRPMYSSL--SSSVDN--KFVDAVEPLLLDNKVDLALFGHVHNY 540
+ASVDR KTPW+IFSGHRP+Y+S S+ + +A+EPL VD+AL+GHVH Y
Sbjct: 442 LASVDREKTPWVIFSGHRPLYTSALPEDSIGSITALREAIEPLFQKYDVDMALWGHVHIY 501
Query: 541 ERTCSVYKQSCLAMPTKDA--NGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSL 598
ERTC A D + I + YS P + +G + P+ WS+
Sbjct: 502 ERTCGFIGNFTCADNDNDGTVHVIIGMAGNTYSVPWEGSDISSGNGHEDEPE-----WSI 556
Query: 599 IRISKFGYLRGNANKEEMKFEFVNSDTREVEDSFRIIK 636
R +G++R AN + FEFV + V DSF + K
Sbjct: 557 FRSISYGHVRFYANTTSLYFEFVGNHRSIVHDSFWLNK 594
|
|
| TAIR|locus:2014839 PAP2 "AT1G13900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 571 (206.1 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 159/453 (35%), Positives = 223/453 (49%)
Query: 220 HLSSSDSTATSMRVTWVSGDKEPQQVQYGD-----GKSETSKVTTFTQDDMCNATALQSP 274
HLS ++ T MRV +V+GD E + V+YG+ G S ++ + ++ MC+ SP
Sbjct: 149 HLSFTNMVNT-MRVMFVAGDGEERFVRYGESKDLLGNSAAARGMRYEREHMCD-----SP 202
Query: 275 AKD-FGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLT 333
A GW DPG+I VM L + Y+ GSD GWS+ + + E + F+
Sbjct: 203 ANSTIGWRDPGWIFDTVMKNLNDGVRYYYQVGSDSKGWSEIHSYIARDVT-AEETVAFM- 260
Query: 334 YGDMGKAPLDDSAEHYIQPGSLSVIKAMAD-EVDNGSVDSIFHIGDISYATGFLVEWDFF 392
+GDMG A + +V + D E I HIGDISYA G+ WD F
Sbjct: 261 FGDMGCATPYTTFIRTQDESISTVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDEF 320
Query: 393 LHQISPVASRVSYMTAIGNHERDYLGS------SGSVYESPDSGGECGVAYETYFPMP-- 444
Q+ P+AS V Y IGNHE D+ + S+Y + D GGECGV Y F MP
Sbjct: 321 FAQVEPIASTVPYHVCIGNHEYDFSTQPWKPDWAASIYGN-DGGGECGVPYSLKFNMPGN 379
Query: 445 --------IPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWL 496
P +YS + VHF +STE ++ + QYE++K+D+ SVDR KTP++
Sbjct: 380 SSESTGMKAPPTRNLYYSYDMGTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFV 439
Query: 497 IFSGHRPMYSSLSSSVDN----KFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCL 552
+ GHRPMY++ + D K V+ +EPL + N V LAL+GHVH YER C + +C
Sbjct: 440 VVQGHRPMYTTSNEVRDTMIRQKMVEHLEPLFVKNNVTLALWGHVHRYERFCPISNNTC- 498
Query: 553 AMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKF----PDNAD------HTWSLIRIS 602
T N PV VIGMAG P++ D S+ R
Sbjct: 499 ----------GTQWQGN---PVHLVIGMAGQDWQPIWQPRPNHPDLPIFPQPEQSMYRTG 545
Query: 603 KFGYLRGNANKEEMKFEFVNSDTREVEDSFRII 635
+FGY R ANKE++ FV + EV D+ ++
Sbjct: 546 EFGYTRLVANKEKLTVSFVGNHDGEVHDTVEML 578
|
|
| TAIR|locus:2063777 PAP9 "purple acid phosphatase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 500 (181.1 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 142/408 (34%), Positives = 201/408 (49%)
Query: 263 DDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPA 322
+ MC+A A + GW DPG+ AVM L+ + Y+ GSDL GWS+ F +
Sbjct: 194 EHMCHAPANST----VGWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKGWSEIHSFVSRNE 249
Query: 323 GGSSEV-LRFLTYGDMGK-APLDDSAEHYIQPGS--LSVIKAMADEVDNGSVDSIFHIGD 378
G + F G E + L I+A+ D D + S HIGD
Sbjct: 250 GSEETLAFMFGDMGCYTPYTTFIRGEEESLSTVKWILRDIEALGD--DKPVIVS--HIGD 305
Query: 379 ISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGS------SGSVYESPDSGGE 432
ISYA G+ WD F QI P+AS+V Y IGNHE D+ + VY DSGGE
Sbjct: 306 ISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQPWKPDWAAYVY-GKDSGGE 364
Query: 433 CGVAYETYFPMPI-----------PARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWM 481
CGV Y F MP P +YS + VHF +STE D+ + +QY ++
Sbjct: 365 CGVPYSVKFNMPGNSTEATGMVKGPQSRNLYYSYDMGSVHFVYISTETDFLKGGKQYSFL 424
Query: 482 KKDMASVDRSKTPWLIFSGHRPMYSSL----SSSVDNKFVDAVEPLLLDNKVDLALFGHV 537
K D+ SV+RSKTP+++ GHRPMY++ +++ K ++ +EPLL+ N V +AL+GHV
Sbjct: 425 KSDLESVNRSKTPFVVVQGHRPMYTTSRKIRDAAIREKMIEHLEPLLVKNNVTVALWGHV 484
Query: 538 HNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGF-TLDKFPDNADH-- 594
H YER C++ +C G + + + PV VIGMAG + + A+H
Sbjct: 485 HRYERFCAISNNTC---------G-ERWQGN----PVHLVIGMAGKDSQPMWEPRANHED 530
Query: 595 -------TWSLIRISKFGYLRGNANKEEMKFEFVNSDTREVEDSFRII 635
S+ R +FGY+R ANKE + +V + EV D I+
Sbjct: 531 VPIFPQPANSMYRGGEFGYIRLVANKERLTLSYVGNHDGEVHDVVEIL 578
|
|
| DICTYBASE|DDB_G0282559 dduA "N-terminal purple acid phosphatase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 301 (111.0 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 105/382 (27%), Positives = 168/382 (43%)
Query: 284 GYIHTAVMTGLRPSATFSYRYGSDLVG-WSDKIQFKTPPAGGS-SEVLRFLT--YGDMGK 339
G I+TAVM+ L PS + Y G + WS F T +V+ F T +GDMG
Sbjct: 85 GKINTAVMSSLSPSTMYFYCVGDKSLNIWSSIFNFTTNQFDAPFGKVIPFTTSFFGDMG- 143
Query: 340 APLDDSAEHYIQPGSLSVIKAMADEVDN--GSVDSIFHIGDISYAT--------GFLVEW 389
+I+ SL+ D + + + + H+GDI+YA G W
Sbjct: 144 ---------WIEGDSLNSDVYTVDNLISRINEIQILHHVGDIAYADKQKPYNLPGNQTIW 194
Query: 390 DFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARD 449
+ F + ISP++S + Y+T GNH+R ++ S Y + MP+
Sbjct: 195 NKFQNSISPLSSHLPYLTCPGNHDR-FIDLS---------------VYTKTWQMPVDFES 238
Query: 450 KPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSK-TPWLIFSGHRPMYSSL 508
WYS + G+HF S+EHD+ S Q+ W++ D+ +S W++ HRP Y S+
Sbjct: 239 DSWYSYDYNGIHFVGFSSEHDYFPLSSQHTWIENDLKQYRKSNPNGWIVMYSHRPFYCSV 298
Query: 509 ----SSSVD---NK--FVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDA 559
S++D +K ++ ++E LL VDL + GH H+YERT V+K +
Sbjct: 299 VWDWCSNIDVVESKKIYLWSLEDLLYKYNVDLFISGHAHSYERTLPVFKNKIMG------ 352
Query: 560 NGIDTYDHSNYSAPVQAVIGMAGFTL-DKFPDNADHTWSL-IRISKFGY-LRGNANKEEM 616
D + A V V+G G + W+ +R S G+ L N +
Sbjct: 353 ------DVESPKATVHIVVGTGGDVEGEDMIWQPSQQWTTGLRTSINGFGLLNVINSTTL 406
Query: 617 KFEFVNSDTREVEDSFRIIKAK 638
++FV + + D F + K +
Sbjct: 407 NWQFVANINNTIIDEFNLTKGQ 428
|
|
| TAIR|locus:2098500 PAP15 "purple acid phosphatase 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 87/280 (31%), Positives = 126/280 (45%)
Query: 284 GYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQ-FKTPPAGG-SSEVLRFLTYGDMGKA- 340
G IH +TGL+PS + YR G KI F+T P SS R GD+G
Sbjct: 140 GIIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGLTY 199
Query: 341 PLDDSAEHYIQPGSLSVIKAMADE------VDNGSVDSIFHIG--DISYATGFLVEWDFF 392
D+ H I S +I + D + NG+ + + + WD++
Sbjct: 200 NTTDTISHLIH-NSPDLILLIGDVSYANLYLTNGTSSDCYSCSFPETPIHETYQPRWDYW 258
Query: 393 LHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKP- 451
+ + S+V M GNHE + L + +E AY + F P
Sbjct: 259 GRFMENLTSKVPLMVIEGNHEIE-LQAENKTFE----------AYSSRFAFPFNESGSSS 307
Query: 452 --WYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLS 509
+YS G+HF ++ + +++EQYEW+KKD+A VDRS TPWL+ S H P YSS +
Sbjct: 308 TLYYSFNAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYT 367
Query: 510 SSVDNK--FVDAVEPLLLDNKVDLALFGHVHNYERTCSVY 547
+ +A+E LL D+ GHVH YER+ VY
Sbjct: 368 AHYREAECMKEAMEELLYSYGTDIVFNGHVHAYERSNRVY 407
|
|
| WB|WBGene00013654 Y105C5B.15 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 284 (105.0 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 116/423 (27%), Positives = 177/423 (41%)
Query: 243 QQVQYG-DGKSETSKVTTFTQDDMCNAT----------ALQSPAK--DFGWHDPG----- 284
+QV GK + VT TQ + N T AL+ AK W D G
Sbjct: 23 EQVHLSLSGKMDEMVVTWLTQGPLPNVTPYVMYGLSKDALRWTAKATTTSWKDQGSHGYV 82
Query: 285 -YIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLD 343
Y H A MT + P T+ Y+ GS SD F P ++ LR +GD+
Sbjct: 83 RYTHRATMTKMVPGDTYYYKVGSSQ-DMSDVYHFHQPDP---TQPLRAAIFGDLS----- 133
Query: 344 DSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLV--EWDFFLHQISPVAS 401
+ G+ S IK + D + D I HIGDI+Y D +++ + P A+
Sbjct: 134 ------VYKGAPS-IKQLTDATHDNHFDVIIHIGDIAYDLHDDEGNRGDDYMNAVQPFAA 186
Query: 402 RVSYMTAIGNHERD-YLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGV 460
V YM GNHE D + + + P +G Y+ ++S +
Sbjct: 187 YVPYMVFAGNHESDSHFNQIINRFTMPKNG-----VYDNNL----------FWSFDYGLT 231
Query: 461 HFTVMSTEH----DWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVD-NK 515
HF +++E+ E QY+W++ D+A ++K W I HRP Y S N
Sbjct: 232 HFIGLNSEYYAEIHTKEAQAQYKWLQADLA---KNKAQWTIVMFHRPWYCSTKDKGGCND 288
Query: 516 FVD-----------AVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDT 564
++D +E LL D+KVD+ L+GH H YER +Y + + D+ I
Sbjct: 289 YLDMLSRKGNSELPGLEKLLFDHKVDMVLYGHKHTYERMWPIYDGT--GYKSSDSGHI-- 344
Query: 565 YDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNA-NKEEMKFEFVNS 623
N APV + G AG + P +A ++S R+ ++GY R N + FV++
Sbjct: 345 ---RNAKAPVYILTGSAGCHTHEGPSDAPQSFSATRLGQYGYTRLKVYNTTHLSTYFVDT 401
Query: 624 DTR 626
+
Sbjct: 402 SDK 404
|
|
| WB|WBGene00219316 F21A3.11 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 286 (105.7 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 109/377 (28%), Positives = 167/377 (44%)
Query: 285 YIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDD 344
YIH +TGL P + Y GSD GWS I F T + YGD+G
Sbjct: 107 YIHRVNLTGLVPGTRYFYHVGSDH-GWSP-IFFFTALKEREDGGFIYAVYGDLG------ 158
Query: 345 SAEHYIQPG-SLSVIKAMADEVDNGSVDSIFHIGDISY----ATGFLVEWDFFLHQISPV 399
++ G SL I+ MA + G +D + H+GD +Y + G D F QI PV
Sbjct: 159 -----VENGRSLGHIQKMAQK---GQLDMVLHVGDFAYNMDESNG--ETGDEFFRQIEPV 208
Query: 400 ASRVSYMTAIGNHERDYLGSSGSV--YESPDSGGECGVAYETYFPMPIPARDKPWYSIEQ 457
A + YM +GNHE Y + V + P+S +Y+ P+ +Y Q
Sbjct: 209 AGYIPYMATVGNHEY-YNNFTHYVNRFTMPNSEHNLFYSYDVG-PVHFVVFSTEFYFYTQ 266
Query: 458 AGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVD-NKF 516
G H M +++W N +KK A+ +R PW+I GHRPMY S D K+
Sbjct: 267 WGYH--QMENQYNWLIND-----LKK--ANSNRHNIPWIITMGHRPMYCSDFDGDDCTKY 317
Query: 517 VD------------AVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDT 564
A+E L + VD+ L+ H H+YER VY ++ NG
Sbjct: 318 ESVIRTGLPLTHGYALEKLFYEYGVDVELWAHEHSYERLWPVYNRTVY-------NGT-R 369
Query: 565 YDHSNYSAPVQAVIGMAGF--TLDKFPDNADHTWSLIRISKFGY-LRGNANKEEMKFEFV 621
+ + + APV + G AG D F ++ WS +R + +G+ + N + F+ +
Sbjct: 370 HPYVDPPAPVHIITGSAGCRENTDVFVEHPP-PWSAVRSTDYGFGVMRVYNSTHLNFKQI 428
Query: 622 N-SDTREVEDSFRIIKA 637
N + +++D F ++K+
Sbjct: 429 NVAQEGKIDDDFWVVKS 445
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 638 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-87 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 6e-34 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 5e-17 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 8e-15 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 4e-11 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 1e-04 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 274 bits (704), Expect = 1e-87
Identities = 114/319 (35%), Positives = 152/319 (47%), Gaps = 40/319 (12%)
Query: 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVE 388
+F +GDMG S + + + E+ N D+I H+GD++YA G+
Sbjct: 5 FKFAVFGDMG----------QNTNNSTNTLDHLEKELGN--YDAILHVGDLAYADGYNNG 52
Query: 389 --WDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP 446
WD F+ QI P+AS V YM GNHE DY S + + P
Sbjct: 53 SRWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFF--------PRFRFPHSPSG 104
Query: 447 ARDKPWYSIEQAGVHFTVMSTEHDWSEN---SEQYEWMKKDMASVDRSKTPWLIFSGHRP 503
+ WYS + VHF +STE D+ + S QY+W++ D+A VDRSKTPW+I GHRP
Sbjct: 105 STSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRP 164
Query: 504 MYSSLSSSVDNKFVD----AVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDA 559
MY S + D + A+E L VDL L GHVH YERTC VY + +
Sbjct: 165 MYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVG------ 218
Query: 560 NGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNAD-HTWSLIRISKFGYLRGNA-NKEEMK 617
D +SN PV VIG G P +A WS R S +G+ R N +
Sbjct: 219 ---DCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLH 275
Query: 618 FEFVNSDTREVEDSFRIIK 636
FE++ +D V DSF IIK
Sbjct: 276 FEWIRNDDGVVIDSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 6e-34
Identities = 113/432 (26%), Positives = 175/432 (40%), Gaps = 76/432 (17%)
Query: 207 PINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYG--DGKSETSKVTTFTQDD 264
P N +P P H+S MR++W++ D P V YG GK E S
Sbjct: 35 PDNEDDPTHPDQVHISLVG--PDKMRISWITQDSIPPSVVYGTVSGKYEGS--------- 83
Query: 265 MCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGG 324
A S + G I+ V+ L+P+ + Y+ G + F+TPP
Sbjct: 84 ---ANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSST--QEFSFRTPP--- 135
Query: 325 SSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATG 384
S ++F GD+G + K+ + V D GD+SYA
Sbjct: 136 SKFPIKFAVSGDLGTSEWT---------------KSTLEHVSKWDYDVFILPGDLSYANF 180
Query: 385 FLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMP 444
+ WD F + P+AS+ +M GNHE + + P E AY + MP
Sbjct: 181 YQPLWDTFGRLVQPLASQRPWMVTHGNHE---------LEKIPILHPEKFTAYNARWRMP 231
Query: 445 IP---ARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGH 501
+ +YS GVH ++ + D+ SEQY+W++ ++ +DR TPW++ H
Sbjct: 232 FEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVH 291
Query: 502 RPMYSSLSS------SVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMP 555
P Y+S + SV K +++E LL +VDL GHVH YER VY+
Sbjct: 292 APWYNSNEAHQGEKESVGMK--ESMETLLYKARVDLVFAGHVHAYERFDRVYQ------- 342
Query: 556 TKDANGIDTYDHSNYSAPVQAVIGMAGFT--LDKFPDNADHTWSLIRISKFGYLRGNA-N 612
++ PV IG G L + SL R + FG+ + N +
Sbjct: 343 ----------GKTDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVVD 392
Query: 613 KEEMKFEFVNSD 624
M++ + +D
Sbjct: 393 ANTMEWTWHRND 404
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 79.0 bits (194), Expect = 5e-17
Identities = 35/193 (18%), Positives = 58/193 (30%), Gaps = 19/193 (9%)
Query: 350 IQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAI 409
L ++ + + + D + +GD+ G L + +
Sbjct: 10 GGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDR-GPPSLEVLALLFALKLKAPGPVYLVR 68
Query: 410 GNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEH 469
GNH+ D S Y + V +S+ +
Sbjct: 69 GNHDFDSGNS----------------ELGFYLECAGLPYVLGNGDVSNGTVEIIGLSSLY 112
Query: 470 DWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVD--NKFVDAVEPLLLDN 527
E+++ + + I H P+ SL S D +A+E LL DN
Sbjct: 113 GKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEALEDLLKDN 172
Query: 528 KVDLALFGHVHNY 540
VDL L GH H
Sbjct: 173 GVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 69.1 bits (170), Expect = 8e-15
Identities = 29/63 (46%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 571 SAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNA-NKEEMKFEFVNSDTREVE 629
APV V+G AG LD FPD WS R S +GY R N+ + +EFV SD V
Sbjct: 1 KAPVHIVVGAAGNGLDPFPDPQ-PPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGTVL 59
Query: 630 DSF 632
DSF
Sbjct: 60 DSF 62
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 80/330 (24%), Positives = 106/330 (32%), Gaps = 88/330 (26%)
Query: 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATG---- 384
LRFL GD G G +V KAMA D I +GD Y G
Sbjct: 1 LRFLALGDWGGGG---------TAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSV 51
Query: 385 ----FLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETY 440
F ++ S +V + +GNH DY G+ + Y
Sbjct: 52 DDPRFETTFEDVYSAPS---LQVPWYLVLGNH--DYSGN-----------VSAQIDYTKR 95
Query: 441 FPMP---IPARDKPWYSIEQAG------VHF----TVMSTEHDWSENS-----------E 476
P +PA +Y + V F TV + S E
Sbjct: 96 PNSPRWTMPAY---YYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEE 152
Query: 477 QYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGH 536
Q W++K +A S W I GH P+YSS + VD + PLL KVD L GH
Sbjct: 153 QLAWLEKTLA---ASTADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKKYKVDAYLSGH 209
Query: 537 VHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTL--DKFPDNADH 594
HN + K +G T V G K D
Sbjct: 210 DHNLQ----HIKD----------DGSGTS---------FVVSGAGSKARPSVKHIDKVPQ 246
Query: 595 TWSLIRISKFGYLRGNANKEEMKFEFVNSD 624
+S S G+ KEE+ F ++D
Sbjct: 247 FFSGFTSSGGGFAYLELTKEELTVRFYDAD 276
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 1e-04
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 479 EWMKKDMASVDRSKTPWL-------IFSGHRPMYSSL--SSSVDNKFVDAVEPLLLDNKV 529
E + +A + P I H P Y L S ++ +A+ LL V
Sbjct: 45 EVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGV 104
Query: 530 DLALFGHVHNYERT 543
DL L GH H YER
Sbjct: 105 DLVLSGHTHVYERR 118
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 638 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.94 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.91 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.9 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.9 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.86 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.86 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.85 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.82 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.74 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.7 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.68 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.66 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.63 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.57 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.56 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.55 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.55 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.5 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.46 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.45 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.42 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.4 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.4 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.36 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.34 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.21 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.17 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.07 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 98.98 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.97 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.95 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.95 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.94 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.94 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.93 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.92 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.91 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.89 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.81 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.81 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.79 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.76 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.74 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.71 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.69 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 98.68 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.68 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.66 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.62 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.57 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.55 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.52 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.45 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.44 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.39 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.37 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.34 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.3 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.22 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.18 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.16 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.14 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.12 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.1 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.03 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.03 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.0 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.95 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.94 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.93 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 97.92 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.9 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.88 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.86 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.74 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.64 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.63 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.6 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.45 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.44 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 97.42 | |
| PHA02239 | 235 | putative protein phosphatase | 97.4 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.3 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.23 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.21 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.14 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.09 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.06 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.03 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.99 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.93 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.92 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.91 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 96.87 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.84 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.84 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.82 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.79 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.76 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 96.59 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.51 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.26 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 96.18 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.11 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.02 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 95.9 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 95.67 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 95.16 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 95.06 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 94.81 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 94.75 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 94.23 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 94.18 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 94.13 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 94.08 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 94.0 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 93.7 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 93.66 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 93.6 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 93.43 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 93.3 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 93.18 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 92.87 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 92.0 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 91.52 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 90.76 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 80.23 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-71 Score=584.92 Aligned_cols=381 Identities=40% Similarity=0.690 Sum_probs=311.8
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCCcEEEEcCCCCccceee-EeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGKSETSKVT-TFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~~~V~yg~~~~~~~~~~-t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
.+.|+|+||++++. .++|+|+|.|.+....+|+||.......... ......+|+ ....+|++.|++|+|+|
T Consensus 42 ~~~peQvhlS~~~~-~~~m~VswvT~~~~~~~V~Yg~~~~~~~~~~~~~~~~~~~~-------~y~~~~~~sg~ih~~~~ 113 (452)
T KOG1378|consen 42 VNSPEQVHLSFTDN-LNEMRVSWVTGDGEENVVRYGEVKDKLDNSAARGMTEAWTD-------GYANGWRDSGYIHDAVM 113 (452)
T ss_pred CCCCCeEEEeccCC-CCcEEEEEeCCCCCCceEEEeecCCCccccccccceEEEec-------ccccccceeeeEeeeee
Confidence 36899999999987 4599999999998889999996433211110 111112222 11235678999999999
Q ss_pred cCCCCCcEEEEEEeeCCCCcceeeEEECCCCCCCCccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCcc
Q 046241 292 TGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVD 371 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~~~~~S~~~sF~T~p~~~~~~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD 371 (638)
++|+|+|+|+||||++. .||++++|+|+| +++.+.+|+++||||......+. .... .+..++|
T Consensus 114 ~~L~~~t~YyY~~Gs~~-~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~s~------------~~~~--~~~~k~d 176 (452)
T KOG1378|consen 114 KNLEPNTRYYYQVGSDL-KWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYTST------------LRNQ--EENLKPD 176 (452)
T ss_pred cCCCCCceEEEEeCCCC-CcccceEeECCC--CccCceeEEEEccccccccccch------------HhHH--hcccCCc
Confidence 99999999999999986 499999999999 34467999999999987654321 1111 1234799
Q ss_pred EEEEeCCcccCCCcH-HHHHHHHHhhhhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCC--
Q 046241 372 SIFHIGDISYATGFL-VEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPAR-- 448 (638)
Q Consensus 372 fvl~~GDi~y~~g~~-~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~-- 448 (638)
+|||+|||+|++++. .+||+|++++||+++.+|+|++.||||.++.. +. |+.+|..+|.||.++.
T Consensus 177 ~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~-~~-----------~F~~y~~Rf~mP~~~s~s 244 (452)
T KOG1378|consen 177 AVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPP-QP-----------CFVPYSARFNMPGNSSES 244 (452)
T ss_pred EEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCC-cc-----------cccccceeeccCCCcCCC
Confidence 999999999999988 69999999999999999999999999998765 21 6789999999996643
Q ss_pred -CCCeEEEEECCEEEEEEeCCCCC--CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCC--C---CCCHHHHHHH
Q 046241 449 -DKPWYSIEQAGVHFTVMSTEHDW--SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLS--S---SVDNKFVDAV 520 (638)
Q Consensus 449 -~~~yYsfd~G~v~fi~LDT~~~~--~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~--~---~~~~~~r~~l 520 (638)
.+.|||||+|++|||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+|++.. + +....+++.|
T Consensus 245 ~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~L 324 (452)
T KOG1378|consen 245 DSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGL 324 (452)
T ss_pred CCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHH
Confidence 45899999999999999999874 45789999999999999987799999999999999886 3 2223678899
Q ss_pred HHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCc--cCCCCCCCCCCcce
Q 046241 521 EPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFT--LDKFPDNADHTWSL 598 (638)
Q Consensus 521 ~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~--~~~~~~~~~~~ws~ 598 (638)
++||.+++||++|+||+|+|||+||+||.+|..... -..+ .++.|||||++|.||+. +..+..+ +|+||+
T Consensus 325 E~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~-----~~~~--~d~~aPvyI~~G~~G~~e~~~~~~~~-~p~~Sa 396 (452)
T KOG1378|consen 325 EPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWG-----PVHL--VDGMAPIYITVGDGGNHEHLDPFSSP-QPEWSA 396 (452)
T ss_pred HHHHHHhceeEEEeccceehhccchhhcceeeccCC-----cccc--cCCCCCEEEEEccCCcccccCcccCC-CCcccc
Confidence 999999999999999999999999999999865322 1122 25789999999999974 5555544 899999
Q ss_pred eeeccccEEEEEE-eCCEEEEEEEEc--CCCcEEEEEEEEecC
Q 046241 599 IRISKFGYLRGNA-NKEEMKFEFVNS--DTREVEDSFRIIKAK 638 (638)
Q Consensus 599 ~~~~~~Gy~~v~v-~~~~L~~~~~~~--~dG~v~D~f~I~k~~ 638 (638)
+|..+|||.+|++ |.+++.++.+++ ..|++.|+|+|.|++
T Consensus 397 ~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~ 439 (452)
T KOG1378|consen 397 FREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDY 439 (452)
T ss_pred cccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEccc
Confidence 9999999999999 789999999986 348999999999864
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-67 Score=571.44 Aligned_cols=363 Identities=28% Similarity=0.506 Sum_probs=298.6
Q ss_pred CCCCCCceEEEeecCCCCCceEEEEEeCCCCCcEEEEcCCCCccc-----eeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 211 ANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGKSETS-----KVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 211 ~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~~~V~yg~~~~~~~-----~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
+++..|+|+||++++ .++|+|+|.|.+...+.|+||+...... ..++|+. ...| .+|+
T Consensus 39 ~~~~~P~qvhls~~~--~~~m~V~W~T~~~~~~~V~yG~~~~~l~~~a~g~~~~~~~--------------~~~~-~~g~ 101 (427)
T PLN02533 39 DDPTHPDQVHISLVG--PDKMRISWITQDSIPPSVVYGTVSGKYEGSANGTSSSYHY--------------LLIY-RSGQ 101 (427)
T ss_pred CCCCCCceEEEEEcC--CCeEEEEEECCCCCCCEEEEecCCCCCcceEEEEEEEEec--------------cccc-cCCe
Confidence 467799999999996 5799999999988889999998654322 1222321 0122 4799
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCCCCcceeeEEECCCCCCCCccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHh
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEV 365 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~~~~S~~~sF~T~p~~~~~~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i 365 (638)
+|+|+|+||+|+|+|+||||.+ .+|+.++|+|+|.. .+++|+++||+|..... ..+++ .+
T Consensus 102 iH~v~l~~L~p~T~Y~Yrvg~~--~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~~-----------~~tl~----~i 161 (427)
T PLN02533 102 INDVVIGPLKPNTVYYYKCGGP--SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEWT-----------KSTLE----HV 161 (427)
T ss_pred EEEEEeCCCCCCCEEEEEECCC--CCccceEEECCCCC---CCeEEEEEEeCCCCccc-----------HHHHH----HH
Confidence 9999999999999999999965 46899999999863 45999999999864311 22333 34
Q ss_pred hCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCC
Q 046241 366 DNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPI 445 (638)
Q Consensus 366 ~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~ 445 (638)
.+.+||||||+||++|+++...+||.|+++++++.+.+|+|+++||||.+... ....+.+..|.++|.||.
T Consensus 162 ~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~---------~~~~~~f~~y~~rf~mP~ 232 (427)
T PLN02533 162 SKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP---------ILHPEKFTAYNARWRMPF 232 (427)
T ss_pred HhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc---------cccCcCccchhhcccCCc
Confidence 56789999999999999888889999999999999999999999999985321 111234567889999996
Q ss_pred CC---CCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCC----CHHHHH
Q 046241 446 PA---RDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSV----DNKFVD 518 (638)
Q Consensus 446 ~~---~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~----~~~~r~ 518 (638)
.+ ..+.||+|++|++|||+||++.++...++|++||+++|++++|+++||+||++|+|+|++..... ...+++
T Consensus 233 ~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~ 312 (427)
T PLN02533 233 EESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKE 312 (427)
T ss_pred cccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHH
Confidence 43 34689999999999999999998888899999999999999888899999999999998764321 245788
Q ss_pred HHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCcc---CCCCCCCCCC
Q 046241 519 AVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTL---DKFPDNADHT 595 (638)
Q Consensus 519 ~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~---~~~~~~~~~~ 595 (638)
.|++||.+++||++|+||+|.|||++|+|++++ ++.|||||++|+||+.. ..+..+ +++
T Consensus 313 ~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~-----------------~~~gpvyiv~G~gG~~e~~~~~~~~~-~~~ 374 (427)
T PLN02533 313 SMETLLYKARVDLVFAGHVHAYERFDRVYQGKT-----------------DKCGPVYITIGDGGNREGLATKYIDP-KPD 374 (427)
T ss_pred HHHHHHHHhCCcEEEecceecccccccccCCcc-----------------CCCCCEEEEeCCCccccccccccCCC-CCC
Confidence 999999999999999999999999999999864 24689999999999863 234444 788
Q ss_pred cceeeeccccEEEEEE-eCCEEEEEEEEcCCC--cEEEEEEEEec
Q 046241 596 WSLIRISKFGYLRGNA-NKEEMKFEFVNSDTR--EVEDSFRIIKA 637 (638)
Q Consensus 596 ws~~~~~~~Gy~~v~v-~~~~L~~~~~~~~dG--~v~D~f~I~k~ 637 (638)
|+.+|..+|||.+|++ +.++|+++|+++++| .+.|+|||.|-
T Consensus 375 ~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~ 419 (427)
T PLN02533 375 ISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSL 419 (427)
T ss_pred ceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEec
Confidence 9999999999999996 999999999987666 38999999984
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-45 Score=382.73 Aligned_cols=277 Identities=41% Similarity=0.709 Sum_probs=220.1
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcH--HHHHHHHHhhhhhccCcce
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFL--VEWDFFLHQISPVASRVSY 405 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~--~~wd~f~~~l~~l~~~vP~ 405 (638)
++||+++||+|.... .+.+++++|.++ ..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 4 ~~~f~v~gD~~~~~~----------~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 4 PFKFAVFGDMGQNTN----------NSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred cEEEEEEEECCCCCC----------CcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 499999999997521 235677777654 47899999999999988765 7899999999999999999
Q ss_pred EEecCCCccCCCCCCCCcccCCCCCCccchhccccccCC---CCCCCCCeEEEEECCEEEEEEeCCCCC---CCcHHHHH
Q 046241 406 MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMP---IPARDKPWYSIEQAGVHFTVMSTEHDW---SENSEQYE 479 (638)
Q Consensus 406 ~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P---~~~~~~~yYsfd~G~v~fi~LDT~~~~---~~~~~Q~~ 479 (638)
++++||||..... ..... ..+..++.++ .....+.||+|++|++|||+|||+... ..+.+|++
T Consensus 72 ~~~~GNHD~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~ 140 (294)
T cd00839 72 MVTPGNHEADYNF-SFYKI----------KAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYD 140 (294)
T ss_pred EEcCcccccccCC-CCccc----------ccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHH
Confidence 9999999986443 11100 0000011122 222356799999999999999998765 57899999
Q ss_pred HHHHHhccccCCCCCeEEEEeccCCccCCCCCC----CHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCC
Q 046241 480 WMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSV----DNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMP 555 (638)
Q Consensus 480 WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~----~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~ 555 (638)
||+++|+++++++.+|+||++|+|+|+...... ....++.|++||++|+|+++|+||+|.|+|++|+++++|+..
T Consensus 141 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~- 219 (294)
T cd00839 141 WLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGD- 219 (294)
T ss_pred HHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccc-
Confidence 999999988766779999999999998764432 357889999999999999999999999999999999887511
Q ss_pred ccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCC-CCCCcceeeeccccEEEEEEeC-CEEEEEEEEcCCCcEEEEEE
Q 046241 556 TKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDN-ADHTWSLIRISKFGYLRGNANK-EEMKFEFVNSDTREVEDSFR 633 (638)
Q Consensus 556 ~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~-~~~~ws~~~~~~~Gy~~v~v~~-~~L~~~~~~~~dG~v~D~f~ 633 (638)
. ..| .+++|++||++|+||+.+...... +.++|+.++...+||++|++.+ ++|+++++++.+|+|+|+|+
T Consensus 220 ---~---~~~--~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~ 291 (294)
T cd00839 220 ---C---NPY--SNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFW 291 (294)
T ss_pred ---c---ccc--cCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEE
Confidence 1 122 256899999999999987644322 1358999999999999999965 59999999988999999999
Q ss_pred EEe
Q 046241 634 IIK 636 (638)
Q Consensus 634 I~k 636 (638)
|.|
T Consensus 292 i~k 294 (294)
T cd00839 292 IIK 294 (294)
T ss_pred EeC
Confidence 987
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=299.96 Aligned_cols=265 Identities=23% Similarity=0.286 Sum_probs=196.8
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc----HHHHHH-HHHhhhhhc--c
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF----LVEWDF-FLHQISPVA--S 401 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~----~~~wd~-f~~~l~~l~--~ 401 (638)
++|+++||+|.+. ..+..+.++|.+.+++.++|||+.+||+. .+|. ..+|+. |-+.+.... .
T Consensus 27 l~F~~vGDwG~g~----------~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L 95 (394)
T PTZ00422 27 LRFASLGNWGTGS----------KQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDM 95 (394)
T ss_pred EEEEEEecCCCCc----------hhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhh
Confidence 9999999999642 13577888888888889999999999998 4443 355765 444444433 5
Q ss_pred CcceEEecCCCccCCCCCCCCc--ccCCCC--CCccchhc------cccccCCCCCCCCCeEEE----EE----------
Q 046241 402 RVSYMTAIGNHERDYLGSSGSV--YESPDS--GGECGVAY------ETYFPMPIPARDKPWYSI----EQ---------- 457 (638)
Q Consensus 402 ~vP~~~v~GNHD~~~~~~sgs~--y~~~ds--~ge~~~~y------~~~f~~P~~~~~~~yYsf----d~---------- 457 (638)
++||++++||||+..+. .... +...-. .+.....| ..+|.||. .||.+ ..
T Consensus 96 ~~Pwy~vLGNHDy~Gn~-~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~ 169 (394)
T PTZ00422 96 QIPFFTVLGQADWDGNY-NAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSG 169 (394)
T ss_pred CCCeEEeCCcccccCCc-hhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeeccccccccccc
Confidence 79999999999985433 1110 100000 00000011 35788884 47754 21
Q ss_pred ---CCEEEEEEeCCCC---C---CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCC
Q 046241 458 ---AGVHFTVMSTEHD---W---SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNK 528 (638)
Q Consensus 458 ---G~v~fi~LDT~~~---~---~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~ 528 (638)
..+.|++|||..- + .....|++||+++|+.+ ++.++|+||++|||+|+++.++.+.++++.|+|||++|+
T Consensus 170 ~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg~~~~L~~~L~PLL~ky~ 248 (394)
T PTZ00422 170 HKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSKGDSYLSYYLLPLLKDAQ 248 (394)
T ss_pred CCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCCCCHHHHHHHHHHHHHcC
Confidence 1289999999631 1 23578999999999754 356789999999999999988888889999999999999
Q ss_pred CeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEE
Q 046241 529 VDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLR 608 (638)
Q Consensus 529 VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~ 608 (638)
||++|+||+|+|||..+ +++.||++|+||....... . ..+|+.+....+||+.
T Consensus 249 VdlYisGHDH~lq~i~~-------------------------~gt~yIvSGaGs~~~~~~~-~-~~~~s~F~~~~~GF~~ 301 (394)
T PTZ00422 249 VDLYISGYDRNMEVLTD-------------------------EGTAHINCGSGGNSGRKSI-M-KNSKSLFYSEDIGFCI 301 (394)
T ss_pred cCEEEEccccceEEecC-------------------------CCceEEEeCccccccCCCC-C-CCCCcceecCCCCEEE
Confidence 99999999999999631 2467999999988654322 2 4567888888899999
Q ss_pred EEEeCCEEEEEEEEcCCCcEEEEEEEEecC
Q 046241 609 GNANKEEMKFEFVNSDTREVEDSFRIIKAK 638 (638)
Q Consensus 609 v~v~~~~L~~~~~~~~dG~v~D~f~I~k~~ 638 (638)
+++++++|+++|++..+|++++++++.|++
T Consensus 302 ~~l~~~~l~~~fid~~~GkvL~~~~~~~~~ 331 (394)
T PTZ00422 302 HELNAEGMVTKFVSGNTGEVLYTHKQPLKK 331 (394)
T ss_pred EEEecCEEEEEEEeCCCCcEEEEeeecccc
Confidence 999999999999976799999999997653
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=278.50 Aligned_cols=248 Identities=28% Similarity=0.363 Sum_probs=183.3
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcH----HHH-HHHHHhhhhhccCc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFL----VEW-DFFLHQISPVASRV 403 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~----~~w-d~f~~~l~~l~~~v 403 (638)
++|+++||+|.... +.+..+.+.|.+.+++.+|||||++||++|+.|.. .+| +.|.+.++.+..++
T Consensus 1 ~~f~~~gD~g~~~~---------~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (277)
T cd07378 1 LRFLALGDWGGGGT---------AGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQV 71 (277)
T ss_pred CeEEEEeecCCCCC---------HHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcC
Confidence 48999999997521 12456677777777778999999999999887642 334 34555555555689
Q ss_pred ceEEecCCCccCCCCCCCC-cccCCCCCCccchhccccccCCCCCCCCCeEEEEEC------CEEEEEEeCCCCC-----
Q 046241 404 SYMTAIGNHERDYLGSSGS-VYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQA------GVHFTVMSTEHDW----- 471 (638)
Q Consensus 404 P~~~v~GNHD~~~~~~sgs-~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G------~v~fi~LDT~~~~----- 471 (638)
|+|+++||||..... ... .|. ...+..+|.+| ..||+|+++ +++||+|||....
T Consensus 72 P~~~v~GNHD~~~~~-~~~~~~~--------~~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~ 137 (277)
T cd07378 72 PWYLVLGNHDYSGNV-SAQIDYT--------KRPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDD 137 (277)
T ss_pred CeEEecCCcccCCCc-hheeehh--------ccCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccc
Confidence 999999999985322 000 000 00012334444 468999998 7999999997531
Q ss_pred ----------CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 472 ----------SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 472 ----------~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
..+.+|++||+++|+++. .+|+||++|+|+++..........++.|++++++++|+++|+||+|.++
T Consensus 138 ~~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~ 214 (277)
T cd07378 138 IASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKKYKVDAYLSGHDHNLQ 214 (277)
T ss_pred ccccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCCCcHHHHHHHHHHHHHcCCCEEEeCCcccce
Confidence 247899999999999853 3799999999999876555556788999999999999999999999999
Q ss_pred eecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCC--CCCCcceeeeccccEEEEEEeCCEEEEE
Q 046241 542 RTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDN--ADHTWSLIRISKFGYLRGNANKEEMKFE 619 (638)
Q Consensus 542 Rt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~--~~~~ws~~~~~~~Gy~~v~v~~~~L~~~ 619 (638)
+..+ +..++.||++|++|......... ..++|..++...+||++++|++++|+++
T Consensus 215 ~~~~-----------------------~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~~~l~~~ 271 (277)
T cd07378 215 HIKD-----------------------DGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTKEELTVR 271 (277)
T ss_pred eeec-----------------------CCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEecCEEEEE
Confidence 8643 11367899999988764432221 1236788888899999999999999999
Q ss_pred EEEcCCC
Q 046241 620 FVNSDTR 626 (638)
Q Consensus 620 ~~~~~dG 626 (638)
|++ .+|
T Consensus 272 ~~~-~~g 277 (277)
T cd07378 272 FYD-ADG 277 (277)
T ss_pred EEC-CCC
Confidence 996 455
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=241.80 Aligned_cols=239 Identities=15% Similarity=0.186 Sum_probs=169.7
Q ss_pred ccEEEEEEecCCCCCCCCCccc--ccCCChHHHHHHHHHHhhCC--CccEEEEeCCcccCCCcH----HHHHHHHHhhhh
Q 046241 327 EVLRFLTYGDMGKAPLDDSAEH--YIQPGSLSVIKAMADEVDNG--SVDSIFHIGDISYATGFL----VEWDFFLHQISP 398 (638)
Q Consensus 327 ~~~rf~v~GD~g~~~~~~~~~~--~~~pg~~~~~~~l~~~i~~~--~pDfvl~~GDi~y~~g~~----~~wd~f~~~l~~ 398 (638)
++++|+++||+|.+........ .........++++++.+.+. +||+|+++||+++..... .+|+.+.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 3599999999999853321110 00112234567777777655 999999999999765432 456777777777
Q ss_pred hccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCC------C
Q 046241 399 VASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDW------S 472 (638)
Q Consensus 399 l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~------~ 472 (638)
+...+|+++++||||..... . .+....|...| +..||+|++|+++||+|||.... .
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~-~----------~~~~~~f~~~~-------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTP-T----------EESIKDYRDVF-------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCC-C----------hhHHHHHHHHh-------CCcceEEEECCEEEEEeccccccCcccccc
Confidence 66689999999999984322 0 01112233333 23589999999999999996432 2
Q ss_pred CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCC------CCCHHHHHHHHHHHHhCCCeEEEEccccccceeccc
Q 046241 473 ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSS------SVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSV 546 (638)
Q Consensus 473 ~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~------~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~ 546 (638)
...+|++||+++|+++.+.+.+++||++|+|++..... ......++.|.++|++++|+++|+||+|.+++..
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~-- 222 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR-- 222 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE--
Confidence 35799999999999875446678999999999864422 1235678899999999999999999999987631
Q ss_pred ccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEE
Q 046241 547 YKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVN 622 (638)
Q Consensus 547 ~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~ 622 (638)
+ .++.+++++++|..+.. ...||..+++++++++.|++.
T Consensus 223 ~-----------------------~g~~~~~~~~~~~~~~~--------------~~~g~~~~~v~~~~~~~~~~~ 261 (262)
T cd07395 223 Y-----------------------GGLEMVVTSAIGAQLGN--------------DKSGLRIVKVTEDKIVHEYYS 261 (262)
T ss_pred E-----------------------CCEEEEEcCceecccCC--------------CCCCcEEEEECCCceeeeeee
Confidence 1 23456777777754321 236999999999999999974
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=226.41 Aligned_cols=263 Identities=19% Similarity=0.292 Sum_probs=173.1
Q ss_pred EECCCCCCCCccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHH-HHHHh
Q 046241 317 FKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWD-FFLHQ 395 (638)
Q Consensus 317 F~T~p~~~~~~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd-~f~~~ 395 (638)
+.-++.+ +.+ ++|+++||+|.....+ +.++..+|.+..++.++||||.+||++|++|...+.| .|.+.
T Consensus 34 l~~p~~~-dgs-lsflvvGDwGr~g~~n---------qs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~s 102 (336)
T KOG2679|consen 34 LYDPAKS-DGS-LSFLVVGDWGRRGSFN---------QSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDS 102 (336)
T ss_pred hcCCCCC-CCc-eEEEEEcccccCCchh---------HHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhh
Confidence 4444432 334 9999999999544321 2345555655556689999999999999998766554 23333
Q ss_pred hhhhc----cCcceEEecCCCccCCCCCCCCcccCCCCCCccchhcc---ccccCCCCCCCCCeEE----EE--ECCEEE
Q 046241 396 ISPVA----SRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYE---TYFPMPIPARDKPWYS----IE--QAGVHF 462 (638)
Q Consensus 396 l~~l~----~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~---~~f~~P~~~~~~~yYs----fd--~G~v~f 462 (638)
++.+. -+.|||.+.||||+..+- .... ...|. .+|.-|. .||. .+ .-++.+
T Consensus 103 F~nIYT~pSLQkpWy~vlGNHDyrGnV-~AQl----------s~~l~~~d~RW~c~r-----sf~~~ae~ve~f~v~~~~ 166 (336)
T KOG2679|consen 103 FENIYTAPSLQKPWYSVLGNHDYRGNV-EAQL----------SPVLRKIDKRWICPR-----SFYVDAEIVEMFFVDTTP 166 (336)
T ss_pred hhhcccCcccccchhhhccCccccCch-hhhh----------hHHHHhhccceeccc-----HHhhcceeeeeecccccc
Confidence 33332 367999999999985443 1110 00121 2333221 1110 00 111233
Q ss_pred EEEeCCC-------CCC-------CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCC
Q 046241 463 TVMSTEH-------DWS-------ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNK 528 (638)
Q Consensus 463 i~LDT~~-------~~~-------~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~ 528 (638)
+++|+-. ++. ....|+.||+..|++ +.++|+||++|||+.+.+.++...++++.|.|||++++
T Consensus 167 f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~HG~T~eL~~~LlPiL~~n~ 243 (336)
T KOG2679|consen 167 FMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHHGPTKELEKQLLPILEANG 243 (336)
T ss_pred chhhheecccccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhccCChHHHHHHHHHHHHhcC
Confidence 3333311 121 146788999999998 67899999999999999999999999999999999999
Q ss_pred CeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCE-EEEECCCCCccCCCCCCCCCCcc----eeeecc
Q 046241 529 VDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPV-QAVIGMAGFTLDKFPDNADHTWS----LIRISK 603 (638)
Q Consensus 529 VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv-~iv~G~aG~~~~~~~~~~~~~ws----~~~~~~ 603 (638)
||++++||+|+.|... .++.++ |+++|+|......-.. ++.|. .+....
T Consensus 244 VdlY~nGHDHcLQhis------------------------~~e~~iqf~tSGagSkaw~g~~~--~~~~~p~~lkF~Ydg 297 (336)
T KOG2679|consen 244 VDLYINGHDHCLQHIS------------------------SPESGIQFVTSGAGSKAWRGTDH--NPEVNPKELKFYYDG 297 (336)
T ss_pred CcEEEecchhhhhhcc------------------------CCCCCeeEEeeCCcccccCCCcc--CCccChhheEEeeCC
Confidence 9999999999999852 112344 5555555433222111 22332 344556
Q ss_pred ccEEEEEEeCCEEEEEEEEcCCCcEEEEEEEEe
Q 046241 604 FGYLRGNANKEEMKFEFVNSDTREVEDSFRIIK 636 (638)
Q Consensus 604 ~Gy~~v~v~~~~L~~~~~~~~dG~v~D~f~I~k 636 (638)
-||+-++++..++++.|++. .|+++.+....|
T Consensus 298 qGfmsv~is~~e~~vvfyD~-~G~~Lhk~~t~k 329 (336)
T KOG2679|consen 298 QGFMSVEISHSEARVVFYDV-SGKVLHKWSTSK 329 (336)
T ss_pred CceEEEEEecceeEEEEEec-cCceEEEeeccc
Confidence 69999999999999999984 899988776554
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-22 Score=224.00 Aligned_cols=243 Identities=20% Similarity=0.290 Sum_probs=126.9
Q ss_pred CceEEEEEEcCCCCCcEEEEEEeeCC-CCcceeeEEECCCCCCCCccEEEEEEecCCCCCCCCCcccccCCChHHHHHHH
Q 046241 283 PGYIHTAVMTGLRPSATFSYRYGSDL-VGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAM 361 (638)
Q Consensus 283 ~g~~h~a~l~gL~P~T~Y~Yrvg~~~-~~~S~~~sF~T~p~~~~~~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l 361 (638)
..+++++.++||+|+|+|+||+..++ ...|+.++|+|+|...... +||+++||.+.... ...+++.|
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~~-~r~a~~SC~~~~~~-----------~~~~~~~~ 127 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPDP-FRFAFGSCQNYEDG-----------YFPAYRRI 127 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT------EEEEEE----CCC--------------HHHHHH
T ss_pred CCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCCc-eEEEEECCCCcccC-----------hHHHHHhh
Confidence 35889999999999999999999853 3567899999997654444 99999999875321 13444444
Q ss_pred HHHhhCCCccEEEEeCCcccCCCc-----------------------HHH----HHHHH--HhhhhhccCcceEEecCCC
Q 046241 362 ADEVDNGSVDSIFHIGDISYATGF-----------------------LVE----WDFFL--HQISPVASRVSYMTAIGNH 412 (638)
Q Consensus 362 ~~~i~~~~pDfvl~~GDi~y~~g~-----------------------~~~----wd~f~--~~l~~l~~~vP~~~v~GNH 412 (638)
++ +.+|||+||+||++|+++. ... |..+. ..++.+.+++|++.++.+|
T Consensus 128 a~---~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDH 204 (453)
T PF09423_consen 128 AE---RDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDH 204 (453)
T ss_dssp TT----S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---ST
T ss_pred hc---cCCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCc
Confidence 32 2689999999999999842 111 22221 2456667899999999999
Q ss_pred ccCCCCCCCCcccCCC-CCC-------ccchhccccccCCC----CCCCCCeEEEEECC-EEEEEEeCCCCCC-------
Q 046241 413 ERDYLGSSGSVYESPD-SGG-------ECGVAYETYFPMPI----PARDKPWYSIEQAG-VHFTVMSTEHDWS------- 472 (638)
Q Consensus 413 D~~~~~~sgs~y~~~d-s~g-------e~~~~y~~~f~~P~----~~~~~~yYsfd~G~-v~fi~LDT~~~~~------- 472 (638)
|+..+. .+..-...+ ..+ .....|.++.++.. ......|++|.+|+ +.|++||++....
T Consensus 205 di~nn~-~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~ 283 (453)
T PF09423_consen 205 DIGNNW-WGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGP 283 (453)
T ss_dssp TTSTT--BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSS
T ss_pred eecccc-cCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhcccccccccc
Confidence 995433 111000000 000 01123333333321 11345789999999 9999999975321
Q ss_pred --------------CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCC-------------CCCCHHHHHHHHHHHH
Q 046241 473 --------------ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLS-------------SSVDNKFVDAVEPLLL 525 (638)
Q Consensus 473 --------------~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~-------------~~~~~~~r~~l~~Ll~ 525 (638)
.|.+|++||++.|++ +.++|+|++.-.|+..... +..-..-|++|..+|.
T Consensus 284 ~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~ 360 (453)
T PF09423_consen 284 GDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLR 360 (453)
T ss_dssp EE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHH
T ss_pred ccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHH
Confidence 379999999999997 4589999998877743321 2233566899999998
Q ss_pred hCCCe--EEEEccccccceec
Q 046241 526 DNKVD--LALFGHVHNYERTC 544 (638)
Q Consensus 526 k~~Vd--lvlsGH~H~YeRt~ 544 (638)
+.++. ++|+|++|......
T Consensus 361 ~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 361 ESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp HTT---EEEEE-SSSSEEEEE
T ss_pred hhCCCCEEEEecCcchheeee
Confidence 88664 88999999987654
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=209.60 Aligned_cols=192 Identities=20% Similarity=0.243 Sum_probs=133.2
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc--HHHHHHHHHhhhhhccCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF--LVEWDFFLHQISPVASRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~--~~~wd~f~~~l~~l~~~vP~~ 406 (638)
|||++++|+|.......... ........++++++.+++.+||+|+++||+++.... ..+|+.+.+.++.+ .+|++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~-~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~~ 77 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPR-YYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPVH 77 (267)
T ss_pred CeEEEEeccccccCCCcccc-hHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCEE
Confidence 69999999996543211111 112245667778888877889999999999964432 15566666666654 58999
Q ss_pred EecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCC----------------
Q 046241 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHD---------------- 470 (638)
Q Consensus 407 ~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~---------------- 470 (638)
+++||||..... . ..+.. ......+..||+|++++++||+||+...
T Consensus 78 ~v~GNHD~~~~~--~-------------~~~~~---~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~ 139 (267)
T cd07396 78 HVLGNHDLYNPS--R-------------EYLLL---YTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENAD 139 (267)
T ss_pred EecCcccccccc--H-------------hhhhc---ccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHH
Confidence 999999984322 0 00000 1111224569999999999999999531
Q ss_pred ------------------CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCC-CCCCHHHHHHHHHHHHhC-CCe
Q 046241 471 ------------------WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLS-SSVDNKFVDAVEPLLLDN-KVD 530 (638)
Q Consensus 471 ------------------~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~-~~~~~~~r~~l~~Ll~k~-~Vd 530 (638)
.....+|++||++.|+++.. +..++||++|+|++.... .......++.+.+++.++ +|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~~~~~~~~~~~~~ll~~~~~V~ 218 (267)
T cd07396 140 DNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSPHGLLWNHEEVLSILRAYGCVK 218 (267)
T ss_pred HhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCccccccCHHHHHHHHHhCCCEE
Confidence 13468999999999997642 335689999999976543 111122357889999996 899
Q ss_pred EEEEccccccce
Q 046241 531 LALFGHVHNYER 542 (638)
Q Consensus 531 lvlsGH~H~YeR 542 (638)
++|+||+|.++.
T Consensus 219 ~v~~GH~H~~~~ 230 (267)
T cd07396 219 ACISGHDHEGGY 230 (267)
T ss_pred EEEcCCcCCCCc
Confidence 999999999984
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=204.81 Aligned_cols=225 Identities=13% Similarity=0.154 Sum_probs=154.8
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC--CccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG--SVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
||++++|+|.+..... ..........++++++.+++. +||+|+++||+++. +...+|+.+.+.++.+ .+|++.
T Consensus 1 r~~~iSDlH~~~~~~~--~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~~ 75 (240)
T cd07402 1 LLAQISDLHLRADGEG--ALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVYL 75 (240)
T ss_pred CEEEEeCCccCCCCcc--eecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEEE
Confidence 6999999998754321 011112355677888877765 99999999999965 4566788888887776 799999
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCC----CCcHHHHHHHHH
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDW----SENSEQYEWMKK 483 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~----~~~~~Q~~WL~~ 483 (638)
++||||.... +.+.|.......+..+|+|+.++++|++||+.... ....+|++||++
T Consensus 76 v~GNHD~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 76 LPGNHDDRAA-------------------MRAVFPELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred eCCCCCCHHH-------------------HHHhhccccccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 9999997311 11112111001234578999999999999996532 246889999999
Q ss_pred HhccccCCCCCeEEEEeccCCccCCCCCC---CHHHHHHHHHHHHhC-CCeEEEEccccccceecccccCccccCCccCC
Q 046241 484 DMASVDRSKTPWLIFSGHRPMYSSLSSSV---DNKFVDAVEPLLLDN-KVDLALFGHVHNYERTCSVYKQSCLAMPTKDA 559 (638)
Q Consensus 484 ~La~~~r~~~~w~IV~~H~P~yss~~~~~---~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~ 559 (638)
.|++.. .+++|+++|+|++....... ....++.+.+++.++ +|+++|+||.|......
T Consensus 137 ~L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~--------------- 198 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS--------------- 198 (240)
T ss_pred HHHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE---------------
Confidence 999853 34678899999976542111 112377899999999 99999999999976532
Q ss_pred CCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEE
Q 046241 560 NGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNA 611 (638)
Q Consensus 560 ~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v 611 (638)
.++..++++|+.|..+... ++........+||..+.+
T Consensus 199 ----------~~g~~~~~~gs~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 235 (240)
T cd07402 199 ----------WGGIPLLTAPSTCHQFAPD-----LDDFALDALAPGYRALSL 235 (240)
T ss_pred ----------ECCEEEEEcCcceeeecCC-----CCcccccccCCCCcEEEE
Confidence 1245678888888765332 222222334578888876
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=200.26 Aligned_cols=293 Identities=22% Similarity=0.316 Sum_probs=193.2
Q ss_pred CC-ceEEEeecCCCCCceEEEEEeCC--------CCCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 215 SP-LYGHLSSSDSTATSMRVTWVSGD--------KEPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 215 ~P-~~~~ls~~~~~~~sm~V~W~t~~--------~~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
.| .+..++.|+...++ .|-|+.-+ +..-.+||++.+.....+ +.. .+..+|+ -.+
T Consensus 36 rpaF~~GVaSGDp~~~s-vviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~iv----r~g----t~~a~p~-------~dh 99 (522)
T COG3540 36 RPAFTHGVASGDPTATS-VVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIV----RKG----TVIASPE-------LDH 99 (522)
T ss_pred CCccccccccCCCCCCe-EEEEEccCCccccCCCCcceEEEecCCccHHHHH----hcC----CccCCcc-------cCc
Confidence 45 55566777654444 77788766 334467777655432211 111 1222343 247
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCCCCcceeeEEECCCCCCCCccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHh
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEV 365 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~~~~S~~~sF~T~p~~~~~~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i 365 (638)
.+++.+.||+|++.|+||+..+. .-|+.++|||+|..+. .++|+.+||........ +-..+.+.|
T Consensus 100 tv~v~~~gL~P~~~yfYRf~~~~-~~spvGrtrTapa~~~--~i~~~~fa~ascQ~~~~--------gy~~aY~~m---- 164 (522)
T COG3540 100 TVHVDLRGLSPDQDYFYRFKAGD-ERSPVGRTRTAPAPGR--AIRFVWFADASCQGWEI--------GYMTAYKTM---- 164 (522)
T ss_pred eEEEeccCCCCCceEEEEEeeCC-ccccccccccCCCCCC--cchhhhhhhcccccccc--------chhHHHHHH----
Confidence 88999999999999999998865 4579999999999764 38899999976654321 234444555
Q ss_pred hCCCccEEEEeCCcccCCCcHHH----------------------HHHHH---------HhhhhhccCcceEEecCCCcc
Q 046241 366 DNGSVDSIFHIGDISYATGFLVE----------------------WDFFL---------HQISPVASRVSYMTAIGNHER 414 (638)
Q Consensus 366 ~~~~pDfvl~~GDi~y~~g~~~~----------------------wd~f~---------~~l~~l~~~vP~~~v~GNHD~ 414 (638)
.+.+|||+||.||.+|+.|.... .|.|. ..++...+..|+++.+.+||.
T Consensus 165 a~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv 244 (522)
T COG3540 165 AKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEV 244 (522)
T ss_pred HhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccc
Confidence 55789999999999999753211 12222 234556679999999999999
Q ss_pred CCCCCCCCcccCCCC-CCc---------cchhccccccCCCCC---CCCCeEEEEECC-EEEEEEeCCCCC---------
Q 046241 415 DYLGSSGSVYESPDS-GGE---------CGVAYETYFPMPIPA---RDKPWYSIEQAG-VHFTVMSTEHDW--------- 471 (638)
Q Consensus 415 ~~~~~sgs~y~~~ds-~ge---------~~~~y~~~f~~P~~~---~~~~yYsfd~G~-v~fi~LDT~~~~--------- 471 (638)
..+. +.+.-.. |+ ..+ ..++|.++.++-... ....|.+|.||+ +.|.+||++...
T Consensus 245 ~NN~-~~~~~~n-D~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~ 322 (522)
T COG3540 245 ANNW-SNSIDEN-DSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGN 322 (522)
T ss_pred cccc-ccccccc-CCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCC
Confidence 7554 2111110 22 111 112344433221111 246799999999 689999997543
Q ss_pred -------------CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccC----C-----------CCCCCHHHHHHHHHH
Q 046241 472 -------------SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSS----L-----------SSSVDNKFVDAVEPL 523 (638)
Q Consensus 472 -------------~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss----~-----------~~~~~~~~r~~l~~L 523 (638)
-.|.+|.+||+..|.+ +++.|.|+..-.|+--. . .+.+....|+.|...
T Consensus 323 ~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~f 399 (522)
T COG3540 323 PPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRF 399 (522)
T ss_pred cchhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHH
Confidence 1289999999999997 78999998877776211 1 122335568999999
Q ss_pred HHhCCCe--EEEEcccccccee
Q 046241 524 LLDNKVD--LALFGHVHNYERT 543 (638)
Q Consensus 524 l~k~~Vd--lvlsGH~H~YeRt 543 (638)
+...++. ++|+|.+|...-.
T Consensus 400 i~~~~~~N~V~LtgDvH~~wA~ 421 (522)
T COG3540 400 IADRKIRNTVVLTGDVHYSWAH 421 (522)
T ss_pred HHhcCCCCcEEEechhHHHHHh
Confidence 9988665 8999999986654
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=194.10 Aligned_cols=192 Identities=17% Similarity=0.218 Sum_probs=127.9
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHH-HHHHHHHhhCCCccEEEEeCCcccCCC--------cHHHHHHHHHhhhhhc-
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSV-IKAMADEVDNGSVDSIFHIGDISYATG--------FLVEWDFFLHQISPVA- 400 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~-~~~l~~~i~~~~pDfvl~~GDi~y~~g--------~~~~wd~f~~~l~~l~- 400 (638)
|+.++|+|.+.... ..... .+.+.+.+++.+||+|+++||+++... ...+|+.|.+.+....
T Consensus 2 ~~~iSDlH~g~~~~--------~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T cd07401 2 FVHISDIHVSSFHP--------PNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSV 73 (256)
T ss_pred EEEecccccCCcCc--------hhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCC
Confidence 78999999876432 11111 234556667789999999999996432 2467888888776543
Q ss_pred -cCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEE--EECCEEEEEEeCCCC-------
Q 046241 401 -SRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSI--EQAGVHFTVMSTEHD------- 470 (638)
Q Consensus 401 -~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsf--d~G~v~fi~LDT~~~------- 470 (638)
...|++.++||||..... +. +. ....|.++...... ...+|.+ +.|+++||+|||...
T Consensus 74 ~~~~p~~~v~GNHD~~~~~-~~------~~---~~~~~~~y~~~~~~--~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~ 141 (256)
T cd07401 74 INKEKWFDIRGNHDLFNIP-SL------DS---ENNYYRKYSATGRD--GSFSFSHTTRFGNYSFIGVDPTLFPGPKRPF 141 (256)
T ss_pred CCcceEEEeCCCCCcCCCC-Cc------cc---hhhHHHHhheecCC--CccceEEEecCCCEEEEEEcCccCCCCCCCC
Confidence 268999999999984222 10 00 01123332222111 1223333 359999999999642
Q ss_pred ---CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceeccc
Q 046241 471 ---WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSV 546 (638)
Q Consensus 471 ---~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~ 546 (638)
....++|++||++.|++.. +.+++||++|+|++....... ...+ .+.++|++++|+++|+||.|.+++..|+
T Consensus 142 ~~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~~-~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 142 NFFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPSA-KSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred ceeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCCc-chhH-HHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 2346899999999998753 456899999999965332211 1222 3999999999999999999999986664
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-19 Score=187.40 Aligned_cols=248 Identities=13% Similarity=0.127 Sum_probs=150.8
Q ss_pred EECCCCCCCCccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC--CCccEEEEeCCcccCCCcHHHHHHHHH
Q 046241 317 FKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN--GSVDSIFHIGDISYATGFLVEWDFFLH 394 (638)
Q Consensus 317 F~T~p~~~~~~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfvl~~GDi~y~~g~~~~wd~f~~ 394 (638)
.++.+.. .+ ++||++++|+|....... . .........++++++.+.+ .+|||||++||+++. +...+|+.+.+
T Consensus 5 ~~~~~~~-~~-~~~i~~iSD~Hl~~~~~~-~-~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~-~~~~~~~~~~~ 79 (275)
T PRK11148 5 LTLPLAG-EA-RVRILQITDTHLFADEHE-T-LLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQD-HSSEAYQHFAE 79 (275)
T ss_pred cccccCC-CC-CEEEEEEcCcccCCCCCC-c-eeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCC-CCHHHHHHHHH
Confidence 4555443 33 499999999997432210 0 0011124556666666644 479999999999964 55677888888
Q ss_pred hhhhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCC----
Q 046241 395 QISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHD---- 470 (638)
Q Consensus 395 ~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~---- 470 (638)
.++.+ .+|+++++||||..... ...+. ..+....++.+..++++||+||+...
T Consensus 80 ~l~~l--~~Pv~~v~GNHD~~~~~-------------------~~~~~--~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~ 136 (275)
T PRK11148 80 GIAPL--RKPCVWLPGNHDFQPAM-------------------YSALQ--DAGISPAKHVLIGEHWQILLLDSQVFGVPH 136 (275)
T ss_pred HHhhc--CCcEEEeCCCCCChHHH-------------------HHHHh--hcCCCccceEEecCCEEEEEecCCCCCCcC
Confidence 88776 58999999999973111 11111 00001123334456699999999642
Q ss_pred CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCC---CHHHHHHHHHHHHhC-CCeEEEEccccccceeccc
Q 046241 471 WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSV---DNKFVDAVEPLLLDN-KVDLALFGHVHNYERTCSV 546 (638)
Q Consensus 471 ~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~---~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~ 546 (638)
...+.+|++||++.|++.. + +..||++|||+........ .....+.|.++++++ +|+++|+||+|......
T Consensus 137 G~l~~~ql~wL~~~L~~~~--~-~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~-- 211 (275)
T PRK11148 137 GELSEYQLEWLERKLADAP--E-RHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLD-- 211 (275)
T ss_pred CEeCHHHHHHHHHHHhhCC--C-CCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhce--
Confidence 2347899999999999753 2 3455556655533322111 112356899999998 89999999999865321
Q ss_pred ccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEe-CCEEEEEEEEcCC
Q 046241 547 YKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNAN-KEEMKFEFVNSDT 625 (638)
Q Consensus 547 ~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~-~~~L~~~~~~~~d 625 (638)
..|..++++++.+..+... .... .......||..++++ ++.+..+.+...+
T Consensus 212 -----------------------~~gi~~~~~ps~~~q~~~~----~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~ 263 (275)
T PRK11148 212 -----------------------WNGRRLLATPSTCVQFKPH----CTNF-TLDTVAPGWRELELHADGSLETEVHRLAD 263 (275)
T ss_pred -----------------------ECCEEEEEcCCCcCCcCCC----CCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCC
Confidence 1234456666655432110 1111 111234699999994 5567777766543
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.8e-20 Score=182.75 Aligned_cols=156 Identities=18% Similarity=0.192 Sum_probs=117.8
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhc-cCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVA-SRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~-~~vP~~~ 407 (638)
|+|++++|+|...... .......+++|++.+.+.+||+|+++||+++......+|+.+.+.++.+. ..+|+++
T Consensus 1 f~~~~~~D~q~~~~~~------~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 74 (214)
T cd07399 1 FTLAVLPDTQYYTESY------PEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSV 74 (214)
T ss_pred CEEEEecCCCcCCcCC------HHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEE
Confidence 6899999999764321 11123456777777777899999999999976544778999999888886 6799999
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhcc
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMAS 487 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~ 487 (638)
++||||.- +.+|+ ....+|++||++.|++
T Consensus 75 ~~GNHD~~-----------------------------------------------~~ld~----~~~~~ql~WL~~~L~~ 103 (214)
T cd07399 75 LAGNHDLV-----------------------------------------------LALEF----GPRDEVLQWANEVLKK 103 (214)
T ss_pred ECCCCcch-----------------------------------------------hhCCC----CCCHHHHHHHHHHHHH
Confidence 99999941 11222 1347999999999997
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCC-------CHHHHHHHHHHHHhC-CCeEEEEccccccceec
Q 046241 488 VDRSKTPWLIFSGHRPMYSSLSSSV-------DNKFVDAVEPLLLDN-KVDLALFGHVHNYERTC 544 (638)
Q Consensus 488 ~~r~~~~w~IV~~H~P~yss~~~~~-------~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~ 544 (638)
. +.+++||++|+|++....... ....++.|++|++++ +|+++|+||+|.+.+..
T Consensus 104 ~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 104 H---PDRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred C---CCCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 4 335689999999986543221 123456788999999 79999999999998865
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-17 Score=172.62 Aligned_cols=183 Identities=14% Similarity=0.243 Sum_probs=122.9
Q ss_pred HHHHHHHHHHhhCC--CccEEEEeCCcccCCCcHH--------HHHHHHHhhhhhccCcceEEecCCCccCCCCCCCCcc
Q 046241 355 LSVIKAMADEVDNG--SVDSIFHIGDISYATGFLV--------EWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVY 424 (638)
Q Consensus 355 ~~~~~~l~~~i~~~--~pDfvl~~GDi~y~~g~~~--------~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y 424 (638)
..+++.+++.+++. +|||||++||+++...... .+..+.+.++.....+|+++++||||..... ...
T Consensus 52 ~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~-~~~-- 128 (296)
T cd00842 52 WRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN-QFP-- 128 (296)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc-ccC--
Confidence 45666666666655 9999999999997653221 2455666777777789999999999985332 100
Q ss_pred cCCCCCCccchhcccccc--CCCCC----CCCCeEEEE-ECCEEEEEEeCCCCC-----------CCcHHHHHHHHHHhc
Q 046241 425 ESPDSGGECGVAYETYFP--MPIPA----RDKPWYSIE-QAGVHFTVMSTEHDW-----------SENSEQYEWMKKDMA 486 (638)
Q Consensus 425 ~~~ds~ge~~~~y~~~f~--~P~~~----~~~~yYsfd-~G~v~fi~LDT~~~~-----------~~~~~Q~~WL~~~La 486 (638)
...........+...|. +|... ....||++. .++++||+|||.... ....+|++||+++|+
T Consensus 129 -~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~ 207 (296)
T cd00842 129 -PNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQ 207 (296)
T ss_pred -CcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHH
Confidence 00000010111112221 22211 135689998 899999999997421 235789999999999
Q ss_pred cccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCC--CeEEEEcccccccee
Q 046241 487 SVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNK--VDLALFGHVHNYERT 543 (638)
Q Consensus 487 ~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~YeRt 543 (638)
++.+. ...++|++|+|+........ ....+.|.+|+++|+ |.++|+||+|..+-.
T Consensus 208 ~a~~~-~~~v~I~~HiPp~~~~~~~~-~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 208 EAEQA-GEKVWIIGHIPPGVNSYDTL-ENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHHC-CCeEEEEeccCCCCcccccc-hHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 87533 34578889999976543322 466789999999996 778999999998754
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-17 Score=154.00 Aligned_cols=191 Identities=23% Similarity=0.237 Sum_probs=105.8
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHH-HhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFL-HQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~-~~l~~l~~~vP~~~ 407 (638)
+||+++||+|...... . . ....+.+.....++|+||++||+++.......+.... ..........|+++
T Consensus 1 ~ri~~isD~H~~~~~~--------~-~-~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (200)
T PF00149_consen 1 MRILVISDLHGGYDDD--------S-D-AFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYF 70 (200)
T ss_dssp EEEEEEEBBTTTHHHH--------C-H-HHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred CeEEEEcCCCCCCcch--------h-H-HHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccc
Confidence 6999999999764211 0 1 2344555556789999999999998766554444322 12334456899999
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchhccc--cccCC-CC-CCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHH
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYET--YFPMP-IP-ARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKK 483 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~--~f~~P-~~-~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~ 483 (638)
++||||+.... .. ........ ..... .. ...............+..............+..|+..
T Consensus 71 ~~GNHD~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (200)
T PF00149_consen 71 ILGNHDYYSGN-SF----------YGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLW 139 (200)
T ss_dssp EE-TTSSHHHH-HH----------HHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHH
T ss_pred cccccccceec-cc----------cccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccc
Confidence 99999984321 00 00000000 00000 00 0000001122222222222222111222233333333
Q ss_pred HhccccCCCCCeEEEEeccCCccCCCCCC----CHHHHHHHHHHHHhCCCeEEEEcccccc
Q 046241 484 DMASVDRSKTPWLIFSGHRPMYSSLSSSV----DNKFVDAVEPLLLDNKVDLALFGHVHNY 540 (638)
Q Consensus 484 ~La~~~r~~~~w~IV~~H~P~yss~~~~~----~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 540 (638)
.+....+...+++||++|+|++....... ....++.+..++.+++|+++|+||+|.|
T Consensus 140 ~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 140 LLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred cccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 22222224567999999999987765432 2356788999999999999999999987
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.3e-16 Score=158.38 Aligned_cols=159 Identities=19% Similarity=0.206 Sum_probs=107.1
Q ss_pred CCCccEEEEeCCcccCCC--cHHHH----HHHHHhhhhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhcccc
Q 046241 367 NGSVDSIFHIGDISYATG--FLVEW----DFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETY 440 (638)
Q Consensus 367 ~~~pDfvl~~GDi~y~~g--~~~~w----d~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~ 440 (638)
..+||+||++||+++.+. ...+| +.|.+.+.++....|++.++||||+.+.. . . .......|+++
T Consensus 43 ~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~-~-~-------~~~~~~rf~~~ 113 (257)
T cd08163 43 QLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGN-G-V-------VLPVRQRFEKY 113 (257)
T ss_pred hcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCC-C-C-------CHHHHHHHHHH
Confidence 368999999999996532 12344 44555555443458999999999985432 0 0 00112456666
Q ss_pred ccCCCCCCCCCeEEEEECCEEEEEEeCCCC-----CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCC----
Q 046241 441 FPMPIPARDKPWYSIEQAGVHFTVMSTEHD-----WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSS---- 511 (638)
Q Consensus 441 f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~-----~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~---- 511 (638)
|. ...|+|++|+++||+||+..- .....+|.+||++.|+... ....+||++|+|+|......
T Consensus 114 Fg-------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~--~~~p~ILl~H~Plyr~~~~~cg~~ 184 (257)
T cd08163 114 FG-------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV--KSKPRILLTHVPLYRPPNTSCGPL 184 (257)
T ss_pred hC-------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC--CCCcEEEEeccccccCCCCCCCCc
Confidence 74 235899999999999999631 2245689999999998643 23448999999998653110
Q ss_pred --C--------CHH----H-HHHHHHHHHhCCCeEEEEcccccccee
Q 046241 512 --V--------DNK----F-VDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 512 --~--------~~~----~-r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
. ... + .+.-..||++.++.+||+||+|.|-..
T Consensus 185 re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 185 RESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred cccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 0 000 1 234457778889999999999998765
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.6e-15 Score=153.83 Aligned_cols=191 Identities=17% Similarity=0.149 Sum_probs=117.9
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC--CccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG--SVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+.+++|+|.............+.+.+.++++.+.+++. +||+|+++||+++. +...+....++.++.+ ..|++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~-~~~~~~~~~l~~l~~l--~~~v~~V 77 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA-MKLEEAKLDLAWIDAL--PGTKVLL 77 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC-CChHHHHHHHHHHHhC--CCCeEEE
Confidence 36889999874211101112334466677776665544 99999999999953 3333344444444443 3478999
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCC-CCCeEEEEECCEEEEEEeCCC----CC------------
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPAR-DKPWYSIEQAGVHFTVMSTEH----DW------------ 471 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~-~~~yYsfd~G~v~fi~LDT~~----~~------------ 471 (638)
+||||+.... . ..+.+.+. ..+. -....++.++++.|+.++... .+
T Consensus 78 ~GNHD~~~~~--~-------------~~~~~~l~--~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~ 140 (232)
T cd07393 78 KGNHDYWWGS--A-------------SKLRKALE--ESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEED 140 (232)
T ss_pred eCCccccCCC--H-------------HHHHHHHH--hcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhH
Confidence 9999973211 0 11111111 0000 000234567889999886321 11
Q ss_pred -CCcHHHHHHHHHHhccccCC-CCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccc
Q 046241 472 -SENSEQYEWMKKDMASVDRS-KTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVY 547 (638)
Q Consensus 472 -~~~~~Q~~WL~~~La~~~r~-~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~ 547 (638)
....+|++||++.|+++... ...++|+++|+|++.... + .+.+..++++++++++|+||+|.+++..|+.
T Consensus 141 ~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~---~---~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~ 212 (232)
T cd07393 141 EKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG---D---DSPISKLIEEYGVDICVYGHLHGVGRDRAIN 212 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC---C---HHHHHHHHHHcCCCEEEECCCCCCccccccc
Confidence 01356999999999976422 224789999999876432 1 2467888899999999999999999987763
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.3e-15 Score=148.94 Aligned_cols=159 Identities=18% Similarity=0.206 Sum_probs=104.4
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHH-HHHHHHHhhhhhc-cCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLV-EWDFFLHQISPVA-SRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~-~wd~f~~~l~~l~-~~vP~~ 406 (638)
+||++++|+|......... .......+.+.+.+.+++.+||+||++||+++...... .++.+.+.++++. ..+|++
T Consensus 3 ~ki~~isDlH~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 3 FKILQFADLHFGEGEGTCE--GCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred eEEEEEeeecccCCCCCCC--cchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 8999999999876532100 00012345556665566789999999999998665432 3444444455443 379999
Q ss_pred EecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhc
Q 046241 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMA 486 (638)
Q Consensus 407 ~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La 486 (638)
+++||||.. ......|++||++.|+
T Consensus 81 ~~~GNHD~~-------------------------------------------------------g~l~~~ql~wL~~~l~ 105 (199)
T cd07383 81 ATFGNHDGY-------------------------------------------------------DWIRPSQIEWFKETSA 105 (199)
T ss_pred EECccCCCC-------------------------------------------------------CCCCHHHHHHHHHHHH
Confidence 999999920 0134689999999999
Q ss_pred ccc--CCCCCeEEEEeccCCccCCCC--------C--CC----HHH-HHHHHHHHHhCCCeEEEEccccccceec
Q 046241 487 SVD--RSKTPWLIFSGHRPMYSSLSS--------S--VD----NKF-VDAVEPLLLDNKVDLALFGHVHNYERTC 544 (638)
Q Consensus 487 ~~~--r~~~~w~IV~~H~P~yss~~~--------~--~~----~~~-r~~l~~Ll~k~~VdlvlsGH~H~YeRt~ 544 (638)
+.. +....+.++++|+|+...... + .+ ... .+.+..+.+..+|+++|+||+|.++...
T Consensus 106 ~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 106 ALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 863 224467899999998643210 0 01 111 2334444566799999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.4e-14 Score=153.24 Aligned_cols=92 Identities=22% Similarity=0.381 Sum_probs=72.6
Q ss_pred CCCeEEEE-ECCEEEEEEeCCCC-----CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCC-------HH
Q 046241 449 DKPWYSIE-QAGVHFTVMSTEHD-----WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVD-------NK 515 (638)
Q Consensus 449 ~~~yYsfd-~G~v~fi~LDT~~~-----~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~-------~~ 515 (638)
+..||+|+ .++++||+|||... ....++|++||+++|++. +.+++||++|||++.......+ ..
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 45699999 89999999999642 235799999999999973 4567999999999865432111 12
Q ss_pred HHHHHHHHHHhC-CCeEEEEcccccccee
Q 046241 516 FVDAVEPLLLDN-KVDLALFGHVHNYERT 543 (638)
Q Consensus 516 ~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt 543 (638)
..++|.++|++| +|.++|+||.|....+
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 357899999998 8999999999998754
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.7e-14 Score=136.11 Aligned_cols=164 Identities=16% Similarity=0.162 Sum_probs=103.5
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEecC
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIG 410 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 410 (638)
++++||+|... ..++. ..+++.++|+||++||+++. +...+...+ +.++. ...|+++++|
T Consensus 1 i~~~sD~H~~~--------------~~~~~--~~~~~~~~D~vv~~GDl~~~-~~~~~~~~~-~~l~~--~~~p~~~v~G 60 (188)
T cd07392 1 ILAISDIHGDV--------------EKLEA--IILKAEEADAVIVAGDITNF-GGKEAAVEI-NLLLA--IGVPVLAVPG 60 (188)
T ss_pred CEEEEecCCCH--------------HHHHH--HHhhccCCCEEEECCCccCc-CCHHHHHHH-HHHHh--cCCCEEEEcC
Confidence 57899999642 11121 33456789999999999964 333344333 44443 3689999999
Q ss_pred CCccCCCCCCCCcccCCCCCCccchhccc-cccCCCCCCCCCeEEEEECCEEEEEEeCCCC------CCCcHHHHHHHHH
Q 046241 411 NHERDYLGSSGSVYESPDSGGECGVAYET-YFPMPIPARDKPWYSIEQAGVHFTVMSTEHD------WSENSEQYEWMKK 483 (638)
Q Consensus 411 NHD~~~~~~sgs~y~~~ds~ge~~~~y~~-~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~------~~~~~~Q~~WL~~ 483 (638)
|||..... ..... .+.+ .+ ..+.+++++|+.+++... ....++|++|+ +
T Consensus 61 NHD~~~~~----------------~~~~~~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~ 116 (188)
T cd07392 61 NCDTPEIL----------------GLLTSAGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-G 116 (188)
T ss_pred CCCCHHHH----------------HhhhcCcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-h
Confidence 99963111 00000 0000 11 245678899999987421 13457899998 4
Q ss_pred HhccccCCCCCeEEEEeccCCccCCCCCC--C-HHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 484 DMASVDRSKTPWLIFSGHRPMYSSLSSSV--D-NKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 484 ~La~~~r~~~~w~IV~~H~P~yss~~~~~--~-~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
.|+. ...+..|+++|+|++....... . ....+.+..++++++++++|+||+|.-.
T Consensus 117 ~l~~---~~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 117 RLNN---LLAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hhhc---cCCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 4443 2345689999999976321110 0 1235678889999999999999999864
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-13 Score=144.09 Aligned_cols=184 Identities=17% Similarity=0.250 Sum_probs=126.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
++|+.++|.|..... ......+.+++++++..+||+|+++||+++. +...+++...+.++......|++++
T Consensus 1 ~~i~~isD~H~~~~~--------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~v 71 (301)
T COG1409 1 MRIAHISDLHLGALG--------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIVV 71 (301)
T ss_pred CeEEEEecCcccccc--------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEee
Confidence 489999999987411 1235677888888888999999999999965 7788888888888855567899999
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEE-CCEEEEEEeCCCC----CCCcHHHHHHHHH
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQ-AGVHFTVMSTEHD----WSENSEQYEWMKK 483 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~-G~v~fi~LDT~~~----~~~~~~Q~~WL~~ 483 (638)
|||||..... ...+...+.... ..+..... ++++++.+|+... ...+..|++||++
T Consensus 72 pGNHD~~~~~---------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 72 PGNHDARVVN---------------GEAFSDQFFNRY----AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred CCCCcCCchH---------------HHHhhhhhcccC----cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 9999974332 112222221110 01111122 6789999999753 3468999999999
Q ss_pred HhccccCCCCCeEEEEeccCCccCCCCC--CCHHHHHHHHHHHHhCC--CeEEEEcccccc
Q 046241 484 DMASVDRSKTPWLIFSGHRPMYSSLSSS--VDNKFVDAVEPLLLDNK--VDLALFGHVHNY 540 (638)
Q Consensus 484 ~La~~~r~~~~w~IV~~H~P~yss~~~~--~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~Y 540 (638)
.|++........+|+++|+|+....... ........+..++..++ |+++|+||.|..
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 9997542211245776777765443221 11223456677788887 999999999987
|
|
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.5e-14 Score=142.67 Aligned_cols=182 Identities=15% Similarity=0.124 Sum_probs=111.3
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEec
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAI 409 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 409 (638)
||++++|+|..... .+....++++++.+.+.++|+|+++||++... .+...+++.+..+ ...|++.++
T Consensus 1 ki~~iSDlH~~~~~--------~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v~ 68 (239)
T TIGR03729 1 KIAFSSDLHIDLNH--------FDTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFNA 68 (239)
T ss_pred CEEEEEeecCCCCC--------CCHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEEC
Confidence 58999999974211 11234567777777778899999999999542 2233444444433 468999999
Q ss_pred CCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCC-------------------
Q 046241 410 GNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHD------------------- 470 (638)
Q Consensus 410 GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~------------------- 470 (638)
||||+.... . + ..+.+.+. + ..-.+.++.+..++++|++++...+
T Consensus 69 GNHD~~~~~-~---~----------~~~~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 69 GNHDMLKDL-T---Y----------EEIESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCC-C---H----------HHHHhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 999974211 0 0 01111110 0 0001122333346677777773211
Q ss_pred -------C-----CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCC-------CCCC---HHHHHHHHHHHHhCC
Q 046241 471 -------W-----SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLS-------SSVD---NKFVDAVEPLLLDNK 528 (638)
Q Consensus 471 -------~-----~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~-------~~~~---~~~r~~l~~Ll~k~~ 528 (638)
. ....+|++||++.|++.. ...+|+++|+|+..... .... ....+.|.+++++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~ 209 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYE 209 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhC
Confidence 1 014678999999998753 23488889999854211 1111 112478899999999
Q ss_pred CeEEEEccccccce
Q 046241 529 VDLALFGHVHNYER 542 (638)
Q Consensus 529 VdlvlsGH~H~YeR 542 (638)
|+++++||.|.-..
T Consensus 210 v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 210 IKDVIFGHLHRRFG 223 (239)
T ss_pred CCEEEECCccCCCC
Confidence 99999999999753
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.2e-13 Score=135.54 Aligned_cols=203 Identities=14% Similarity=0.175 Sum_probs=120.1
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+||++++|+|..... ....++++.+.+.+.+||+|+++||+++...... +.+.+.++.+....|++.+
T Consensus 2 ~~i~~~sDlH~~~~~----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~v 69 (223)
T cd07385 2 LRIAHLSDLHLGPFV----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYAV 69 (223)
T ss_pred CEEEEEeecCCCccC----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEEE
Confidence 899999999986532 1245677777777889999999999997543322 3455666666667999999
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccc
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASV 488 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~ 488 (638)
+||||+.... ... .....+...+..- .+.+..++.++..+.++.-... ....+++.+.+++.
T Consensus 70 ~GNHD~~~~~-~~~-----------~~~~l~~~~v~~L--~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 70 LGNHDYYSGD-EEN-----------WIEALESAGITVL--RNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred CCCcccccCc-hHH-----------HHHHHHHcCCEEe--ecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 9999985322 000 0001010011100 1234456666655544432111 12234566666654
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCc--cccCCccCCCCCcccc
Q 046241 489 DRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQS--CLAMPTKDANGIDTYD 566 (638)
Q Consensus 489 ~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~--~~~~~~~d~~G~~~y~ 566 (638)
.+..+.|++.|.|.+. + .+.+.++|++++||+|..|...|..... |.... +-..|. |.
T Consensus 132 --~~~~~~I~l~H~P~~~--------------~-~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~-~~~~G~--~~ 191 (223)
T cd07385 132 --DEDDPNILLAHQPDTA--------------E-EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLAR-PYDYGL--YR 191 (223)
T ss_pred --CCCCCEEEEecCCChh--------------H-HhcccCccEEEeccCCCCEEeccccccccchhhcC-cccceE--EE
Confidence 3455789999998531 1 1267799999999999999877655331 11111 112332 21
Q ss_pred CCCCCCCEEEEECCCCC
Q 046241 567 HSNYSAPVQAVIGMAGF 583 (638)
Q Consensus 567 ~~~~~gpv~iv~G~aG~ 583 (638)
..+..+||..|.|..
T Consensus 192 --~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 192 --KGGSQLYVSRGLGTW 206 (223)
T ss_pred --ECCEEEEEcCCccCC
Confidence 224577777777654
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.5e-13 Score=124.70 Aligned_cols=126 Identities=21% Similarity=0.245 Sum_probs=91.2
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccC-cceEEec
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASR-VSYMTAI 409 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~-vP~~~v~ 409 (638)
|+.++|+|.+....... ......++++.+.+.+.++|+|+++||+++. +...+|+.+.+.++.+... .|++.++
T Consensus 1 il~isD~Hl~~~~~~~~----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v~ 75 (144)
T cd07400 1 ILHLSDLHFGPERKPEL----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVVP 75 (144)
T ss_pred CeEeCccCCCCCcchhH----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEeC
Confidence 57899999876432110 0111124456677778899999999999975 4566787777777776543 6999999
Q ss_pred CCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhcccc
Q 046241 410 GNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVD 489 (638)
Q Consensus 410 GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~~ 489 (638)
||||.
T Consensus 76 GNHD~--------------------------------------------------------------------------- 80 (144)
T cd07400 76 GNHDV--------------------------------------------------------------------------- 80 (144)
T ss_pred CCCeE---------------------------------------------------------------------------
Confidence 99981
Q ss_pred CCCCCeEEEEeccCCccCCCCCC-CHHHHHHHHHHHHhCCCeEEEEcccccccee
Q 046241 490 RSKTPWLIFSGHRPMYSSLSSSV-DNKFVDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 490 r~~~~w~IV~~H~P~yss~~~~~-~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
|+++|+|++....... ....++.+.+++.+++++++++||+|.....
T Consensus 81 -------iv~~Hhp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -------IVVLHHPLVPPPGSGRERLLDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -------EEEecCCCCCCCccccccCCCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 8889999976543211 1114678999999999999999999997753
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.4e-12 Score=129.35 Aligned_cols=177 Identities=13% Similarity=0.113 Sum_probs=109.7
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
+.|+++++|+|.. ...++++.+.+++.++|+|+++||+++......++..+++.+..+ .+|+++
T Consensus 4 ~~kIl~iSDiHgn--------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~~ 67 (224)
T cd07388 4 VRYVLATSNPKGD--------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTFY 67 (224)
T ss_pred eeEEEEEEecCCC--------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceEE
Confidence 4799999999942 456777777776688999999999997532355555666655543 479999
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCC-CCCCCeEEEEE-CCEEEEEEeCCCCC--CCcHHHH----H
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP-ARDKPWYSIEQ-AGVHFTVMSTEHDW--SENSEQY----E 479 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~-~~~~~yYsfd~-G~v~fi~LDT~~~~--~~~~~Q~----~ 479 (638)
++||||..... . ....|......|.. .-... ...+ |+++|+.++..... ...++|. +
T Consensus 68 V~GNhD~~v~~----~---------l~~~~~~~~~~p~~~~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~ 132 (224)
T cd07388 68 VPGPQDAPLWE----Y---------LREAYNAELVHPEIRNVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 132 (224)
T ss_pred EcCCCChHHHH----H---------HHHHhcccccCccceecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhh
Confidence 99999962000 0 00011100001110 00111 2345 56999999865432 2345552 5
Q ss_pred HHHH-HhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEcccc
Q 046241 480 WMKK-DMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVH 538 (638)
Q Consensus 480 WL~~-~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H 538 (638)
||.+ .|+...+...+..|+++|+|++..+.. ....+.+..++++++..+++|||.|
T Consensus 133 ~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~---h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 133 WVAEYRLKALWELKDYRKVFLFHTPPYHKGLN---EQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hHHHHHHHHHHhCCCCCeEEEECCCCCCCCCC---ccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 6433 222221123446899999999987421 1235677889999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.6e-12 Score=135.69 Aligned_cols=92 Identities=18% Similarity=0.290 Sum_probs=66.9
Q ss_pred CCeEEEE-ECCE--EEEEEeCCCC-----------CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCC---
Q 046241 450 KPWYSIE-QAGV--HFTVMSTEHD-----------WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSV--- 512 (638)
Q Consensus 450 ~~yYsfd-~G~v--~fi~LDT~~~-----------~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~--- 512 (638)
..||+|+ .|++ |||+||+... ....++|++||+++|+.+. .+.+++|++.|+|+.+......
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCcccCCccchhhh
Confidence 3599999 5855 9999998641 1247999999999999864 2567888888888875321110
Q ss_pred ------------CHHHHHHHHHHHHhC-CCeEEEEccccccce
Q 046241 513 ------------DNKFVDAVEPLLLDN-KVDLALFGHVHNYER 542 (638)
Q Consensus 513 ------------~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeR 542 (638)
+.....+|..+|.+| +|.++|+||.|...-
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~v 413 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNTV 413 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccccc
Confidence 011124799999999 798999999997543
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-12 Score=130.99 Aligned_cols=198 Identities=12% Similarity=0.089 Sum_probs=115.3
Q ss_pred EEEEEecCCCCCCCCCcccc-cCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCC-cHHHHHHHHHhhhhhc-cCcceE
Q 046241 330 RFLTYGDMGKAPLDDSAEHY-IQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATG-FLVEWDFFLHQISPVA-SRVSYM 406 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~-~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g-~~~~wd~f~~~l~~l~-~~vP~~ 406 (638)
||++++|+|.+......... ........++++.+.+.+.++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 68999999998643211100 01123567788888888889999999999997543 2345666667776654 479999
Q ss_pred EecCCCccCCCCCCCCcccCCCCCCccchhccccccC--CCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHH
Q 046241 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPM--PIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKD 484 (638)
Q Consensus 407 ~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~--P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~ 484 (638)
+++||||..... . ... . ...+...... ...........++.+++.|+.++..... ....+.++++..
T Consensus 81 ~~~GNHD~~~~~-~--~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~ 149 (223)
T cd00840 81 IIAGNHDSPSRL-G--ALS------P-LLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELR 149 (223)
T ss_pred EecCCCCCcccc-c--ccc------c-hHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHH
Confidence 999999985322 0 000 0 0001110000 0000011122334456778888764221 123344454555
Q ss_pred hccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 485 MASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 485 La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
+... .+....|+++|+|+.......... .......+...++|++++||.|..+.
T Consensus 150 ~~~~--~~~~~~Il~~H~~~~~~~~~~~~~--~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 150 PRPL--DPDDFNILLLHGGVAGAGPSDSER--APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred hhcc--CCCCcEEEEEeeeeecCCCCcccc--cccCcHhhcCcCCCEEECCCcccCee
Confidence 5543 345678999999986544221111 12334456678999999999999875
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.1e-12 Score=131.22 Aligned_cols=169 Identities=16% Similarity=0.144 Sum_probs=101.5
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
++|+++++|+|.+... ....++++++.+++.+||+|+++||+++.. ....++.+.+.++.+.+..|+++
T Consensus 49 ~~rI~~lSDlH~~~~~----------~~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv~~ 117 (271)
T PRK11340 49 PFKILFLADLHYSRFV----------PLSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPTFA 117 (271)
T ss_pred CcEEEEEcccCCCCcC----------CHHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCEEE
Confidence 4999999999975422 134566777777788999999999999622 22345566666777766789999
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchhccccc---cCCCCCCCCCeEEEEECC--EEEEEEeCCCCCCCcHHHHHHHH
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYETYF---PMPIPARDKPWYSIEQAG--VHFTVMSTEHDWSENSEQYEWMK 482 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f---~~P~~~~~~~yYsfd~G~--v~fi~LDT~~~~~~~~~Q~~WL~ 482 (638)
++||||+.... .. ...+.+.+ .+.- -.+....+..++ +.++.++.... +... ..
T Consensus 118 V~GNHD~~~~~-~~------------~~~~~~~l~~~gi~l--L~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~ 176 (271)
T PRK11340 118 CFGNHDRPVGT-EK------------NHLIGETLKSAGITV--LFNQATVIATPNRQFELVGTGDLWA---GQCK---PP 176 (271)
T ss_pred ecCCCCcccCc-cc------------hHHHHHHHHhcCcEE--eeCCeEEEeeCCcEEEEEEecchhc---cCCC---hh
Confidence 99999974211 00 00011111 0000 012344455544 55566653211 1100 11
Q ss_pred HHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceeccccc
Q 046241 483 KDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYK 548 (638)
Q Consensus 483 ~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~ 548 (638)
+.+++ ....|++.|.|-+ .+.+.+.++||+|+||+|.-|-..|..+
T Consensus 177 ~~~~~-----~~~~IlL~H~P~~---------------~~~~~~~~~dL~lsGHTHGGQi~lP~~~ 222 (271)
T PRK11340 177 PASEA-----NLPRLVLAHNPDS---------------KEVMRDEPWDLMLCGHTHGGQLRVPLVG 222 (271)
T ss_pred HhcCC-----CCCeEEEEcCCCh---------------hHhhccCCCCEEEeccccCCeEEccccC
Confidence 22221 3357889999953 1234567899999999999998767543
|
|
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-12 Score=104.64 Aligned_cols=61 Identities=43% Similarity=0.700 Sum_probs=41.0
Q ss_pred CCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEE-eCCEEEEEEEEcCCCcEEEEE
Q 046241 571 SAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNA-NKEEMKFEFVNSDTREVEDSF 632 (638)
Q Consensus 571 ~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v-~~~~L~~~~~~~~dG~v~D~f 632 (638)
++|||||+|+||+.++.+..+ +++|+++|..+|||.+|++ |.++|++||+.+.+|+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~-~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYP-PPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS---TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCC-CCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 379999999999988887766 7999999999999999996 899999999999999999998
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.6e-12 Score=120.51 Aligned_cols=144 Identities=19% Similarity=0.151 Sum_probs=88.5
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEecC
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIG 410 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 410 (638)
|+++||+|...... . ..+.+.+...++|+++++||+++.. ...++.. .........|+++++|
T Consensus 1 ~~~iSDlH~~~~~~----------~---~~~~~~~~~~~~d~li~~GDi~~~~-~~~~~~~---~~~~~~~~~~v~~v~G 63 (166)
T cd07404 1 IQYLSDLHLEFEDN----------L---ADLLNFPIAPDADILVLAGDIGYLT-DAPRFAP---LLLALKGFEPVIYVPG 63 (166)
T ss_pred CceEccccccCccc----------c---ccccccCCCCCCCEEEECCCCCCCc-chHHHHH---HHHhhcCCccEEEeCC
Confidence 57899999764321 0 0111334557899999999999643 3333332 2223345789999999
Q ss_pred CCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCC-cHHHHHHHHHHhcccc
Q 046241 411 NHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSE-NSEQYEWMKKDMASVD 489 (638)
Q Consensus 411 NHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~-~~~Q~~WL~~~La~~~ 489 (638)
|||+. +.|+...-..++.. .+++.+|+.++++
T Consensus 64 NHD~~--------------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~--- 96 (166)
T cd07404 64 NHEFY--------------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR--- 96 (166)
T ss_pred CcceE--------------------------------------------EEEEeeecccccCccchHHHHhCCCCCC---
Confidence 99962 12222211111111 2244555555544
Q ss_pred CCCCCeEEEEeccCCccCCCCC------CCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 490 RSKTPWLIFSGHRPMYSSLSSS------VDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 490 r~~~~w~IV~~H~P~yss~~~~------~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
+.+||++|+|+....... .+...++.+..++++++|+++++||+|....
T Consensus 97 ----~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 97 ----GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred ----CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 347999999997654211 1234566688888999999999999998753
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-09 Score=112.17 Aligned_cols=212 Identities=14% Similarity=0.159 Sum_probs=113.2
Q ss_pred cEEEEEEecCCCCCCCCCcccccCC------ChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhh-c
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQP------GSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPV-A 400 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~p------g~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l-~ 400 (638)
.||++.++|+|.+......-...-| ...++..-|.+.++.++||||+++||+++.......-..+++.++|. .
T Consensus 53 ~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~ 132 (379)
T KOG1432|consen 53 TFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAID 132 (379)
T ss_pred ceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHhhhHhh
Confidence 4999999999998652211011111 13455555666667899999999999998754443334455666665 4
Q ss_pred cCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccc-cccCCCCCC-----CCCeEEE-EEC----------CEEEE
Q 046241 401 SRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYET-YFPMPIPAR-----DKPWYSI-EQA----------GVHFT 463 (638)
Q Consensus 401 ~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~-~f~~P~~~~-----~~~yYsf-d~G----------~v~fi 463 (638)
.++||.+++||||-.... +.... .+.. ...+|.- .+. |..+. +...|-. .+| -..++
T Consensus 133 ~~IPwA~~lGNHDdes~l-tr~ql--~~~i--~~lP~s~~~v~-p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~sv~~ly 206 (379)
T KOG1432|consen 133 RKIPWAAVLGNHDDESDL-TRLQL--MKFI--SKLPYSLSQVN-PPDGHMYIIDGFGNYNLQIEGAIDSELENKSVFNLY 206 (379)
T ss_pred cCCCeEEEeccccccccc-CHHHH--HHHH--hcCCCccccCC-CcccceeeeecccceEEEeccCCCcccccCceeeEE
Confidence 799999999999964322 00000 0000 0000000 000 00000 0000100 011 12345
Q ss_pred EEeCCCCC----------CCcHHHHHHHHHHhcc---ccCCCCC-eEEEEeccCCc--cCCCC-----CC------CHHH
Q 046241 464 VMSTEHDW----------SENSEQYEWMKKDMAS---VDRSKTP-WLIFSGHRPMY--SSLSS-----SV------DNKF 516 (638)
Q Consensus 464 ~LDT~~~~----------~~~~~Q~~WL~~~La~---~~r~~~~-w~IV~~H~P~y--ss~~~-----~~------~~~~ 516 (638)
+||+..+- ...+.|.+||+..-.+ .+..-.| --.++.|.|+- ..-.. +. ....
T Consensus 207 fld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~ 286 (379)
T KOG1432|consen 207 FLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKH 286 (379)
T ss_pred EEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecccccccc
Confidence 56654321 2367899999987732 1112223 35677899973 22111 10 1122
Q ss_pred HHHHHHHHH-hCCCeEEEEccccccceecc
Q 046241 517 VDAVEPLLL-DNKVDLALFGHVHNYERTCS 545 (638)
Q Consensus 517 r~~l~~Ll~-k~~VdlvlsGH~H~YeRt~p 545 (638)
...+...|. ..+|+.|++||+|...--++
T Consensus 287 ~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~ 316 (379)
T KOG1432|consen 287 NSGFLTTLVNRGNVKGVFCGHDHVNDFCGE 316 (379)
T ss_pred ccHHHHHHHhccCcceEEeccccccceecc
Confidence 344555565 77999999999999876443
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.3e-10 Score=105.28 Aligned_cols=124 Identities=17% Similarity=0.243 Sum_probs=75.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+||+++||+|... ..++++++.+ .++|+|+++||++.. .++.+.++.+ |++++
T Consensus 1 Mki~~~sD~H~~~--------------~~~~~~~~~~--~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v 53 (156)
T PF12850_consen 1 MKIAVISDLHGNL--------------DALEAVLEYI--NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVV 53 (156)
T ss_dssp EEEEEEE--TTTH--------------HHHHHHHHHH--TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE
T ss_pred CEEEEEeCCCCCh--------------hHHHHHHHHh--cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEE
Confidence 6999999999742 3356777776 469999999999852 4445555443 99999
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccc
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASV 488 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~ 488 (638)
.||||... +...... . . +.+.+..
T Consensus 54 ~GNHD~~~--------------------~~~~~~~------~-~----------------------------~~~~~~~- 77 (156)
T PF12850_consen 54 RGNHDNWA--------------------FPNENDE------E-Y----------------------------LLDALRL- 77 (156)
T ss_dssp --CCHSTH--------------------HHSEECT------C-S----------------------------SHSEEEE-
T ss_pred eCCccccc--------------------chhhhhc------c-c----------------------------cccceee-
Confidence 99999521 1110000 0 0 1111110
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEcccccccee
Q 046241 489 DRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 489 ~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
.-....|++.|...+... ...+.+..++...+++++++||.|.....
T Consensus 78 --~~~~~~i~~~H~~~~~~~------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~ 124 (156)
T PF12850_consen 78 --TIDGFKILLSHGHPYDVQ------WDPAELREILSRENVDLVLHGHTHRPQVF 124 (156)
T ss_dssp --EETTEEEEEESSTSSSST------TTHHHHHHHHHHTTSSEEEESSSSSEEEE
T ss_pred --eecCCeEEEECCCCcccc------cChhhhhhhhcccCCCEEEcCCcccceEE
Confidence 112457888888776532 11335667788999999999999998764
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.5e-10 Score=99.60 Aligned_cols=117 Identities=23% Similarity=0.189 Sum_probs=81.8
Q ss_pred EEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEecCC
Q 046241 332 LTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGN 411 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GN 411 (638)
+++||+|...... .. .. ......+.++|+|+++||+++.... ..+..+...........|++.++||
T Consensus 1 ~~~gD~h~~~~~~----------~~-~~-~~~~~~~~~~~~vi~~GD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~GN 67 (131)
T cd00838 1 AVISDIHGNLEAL----------EA-VL-EAALAAAEKPDFVLVLGDLVGDGPD-PEEVLAAALALLLLLGIPVYVVPGN 67 (131)
T ss_pred CeeecccCCccch----------HH-HH-HHHHhcccCCCEEEECCcccCCCCC-chHHHHHHHHHhhcCCCCEEEeCCC
Confidence 4689999764321 00 00 0234466899999999999976543 3333333233334568999999999
Q ss_pred CccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccccCC
Q 046241 412 HERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRS 491 (638)
Q Consensus 412 HD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~~r~ 491 (638)
||
T Consensus 68 HD------------------------------------------------------------------------------ 69 (131)
T cd00838 68 HD------------------------------------------------------------------------------ 69 (131)
T ss_pred ce------------------------------------------------------------------------------
Confidence 97
Q ss_pred CCCeEEEEeccCCccCCCCCCCH--HHHHHHHHHHHhCCCeEEEEccccccceec
Q 046241 492 KTPWLIFSGHRPMYSSLSSSVDN--KFVDAVEPLLLDNKVDLALFGHVHNYERTC 544 (638)
Q Consensus 492 ~~~w~IV~~H~P~yss~~~~~~~--~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~ 544 (638)
|++.|.|++......... ..++.+..++.+.+++++|+||.|.+.+..
T Consensus 70 -----i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 -----ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -----EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 888899987665332221 147788899999999999999999999864
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.7e-09 Score=109.29 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=56.5
Q ss_pred ccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceE
Q 046241 327 EVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYM 406 (638)
Q Consensus 327 ~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~ 406 (638)
..++++.++|+|..... ....+.+..+.+..||+|+.+||+++. .....++...+.++++.+..+++
T Consensus 43 ~~~~iv~lSDlH~~~~~------------~~~~~~~~~i~~~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 43 QGLKIVQLSDLHSLPFR------------EEKLALLIAIANELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred CCeEEEEeehhhhchhh------------HHHHHHHHHHHhcCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 34999999999986532 222334444456677999999999974 22344566777788888899999
Q ss_pred EecCCCccCC
Q 046241 407 TAIGNHERDY 416 (638)
Q Consensus 407 ~v~GNHD~~~ 416 (638)
++.||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999854
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.7e-09 Score=98.78 Aligned_cols=58 Identities=21% Similarity=0.360 Sum_probs=41.4
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEec
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAI 409 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 409 (638)
|++++||+|.. ...++++.+.+++ +|.|+++||+++.... .. +....|++.+.
T Consensus 1 ~i~~isD~H~~--------------~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~-~~----------~~~~~~~~~V~ 53 (155)
T cd00841 1 KIGVISDTHGS--------------LELLEKALELFGD--VDLIIHAGDVLYPGPL-NE----------LELKAPVIAVR 53 (155)
T ss_pred CEEEEecCCCC--------------HHHHHHHHHHhcC--CCEEEECCcccccccc-ch----------hhcCCcEEEEe
Confidence 58999999953 2345566666533 9999999999864321 11 23467899999
Q ss_pred CCCcc
Q 046241 410 GNHER 414 (638)
Q Consensus 410 GNHD~ 414 (638)
||||.
T Consensus 54 GNhD~ 58 (155)
T cd00841 54 GNCDG 58 (155)
T ss_pred CCCCC
Confidence 99996
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.6e-08 Score=100.69 Aligned_cols=174 Identities=18% Similarity=0.238 Sum_probs=92.9
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+|++++||+|.... .. ..+.+++.+||+|+++||++... ..+.+.+..+ ..|++++
T Consensus 1 ~rIa~isDiHg~~~------------~~----~~~~l~~~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V 56 (238)
T cd07397 1 LRIAIVGDVHGQWD------------LE----DIKALHLLQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVI 56 (238)
T ss_pred CEEEEEecCCCCch------------HH----HHHHHhccCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEE
Confidence 58999999996421 01 12234556899999999998431 1233333333 4789999
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCC---eEEEEECCEEEEEEeCCCC---------------
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKP---WYSIEQAGVHFTVMSTEHD--------------- 470 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~---yYsfd~G~v~fi~LDT~~~--------------- 470 (638)
+||||..+.. . + ... ...+.+....- +.. |-..++....+.++.++-.
T Consensus 57 ~GNHD~~~~~-~---~---~~k---~~~l~~~L~~l----g~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~ 122 (238)
T cd07397 57 LGNHDAWYDA-T---F---RKK---GDRVQEQLELL----GDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKA 122 (238)
T ss_pred cCCCcccccc-c---c---cch---HHHHHHHHHHh----CCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHH
Confidence 9999985432 0 0 000 00111111100 001 1111222223333333310
Q ss_pred -C--CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCC---------------CCCCCHHHHHHHHHHHHhCCCeEE
Q 046241 471 -W--SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSL---------------SSSVDNKFVDAVEPLLLDNKVDLA 532 (638)
Q Consensus 471 -~--~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~---------------~~~~~~~~r~~l~~Ll~k~~Vdlv 532 (638)
+ ..-.+-++.+.+.++.++ ...+ .|++.|.++...+ ...+++++.+++..+-..-.++++
T Consensus 123 ~fgi~s~~eA~~~ive~~~~~~-~~~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~ 200 (238)
T cd07397 123 VYGVISLEESAQRIIAAAKKAP-PDLP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLV 200 (238)
T ss_pred HhCCCCHHHHHHHHHHHhhhcC-CCCC-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEE
Confidence 0 112233444444443322 2233 6888999986553 234567888888766545568999
Q ss_pred EEccccccce
Q 046241 533 LFGHVHNYER 542 (638)
Q Consensus 533 lsGH~H~YeR 542 (638)
++||.|.--|
T Consensus 201 ~fGH~H~~l~ 210 (238)
T cd07397 201 VFGHMHHRLR 210 (238)
T ss_pred EeCCccCccc
Confidence 9999998644
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.5e-09 Score=103.51 Aligned_cols=60 Identities=17% Similarity=0.373 Sum_probs=41.4
Q ss_pred HHHHHHHHhhCCCccEEEEeCCcccCCCc--HHHHHHHHHhhhhhc-------cCcceEEecCCCccCC
Q 046241 357 VIKAMADEVDNGSVDSIFHIGDISYATGF--LVEWDFFLHQISPVA-------SRVSYMTAIGNHERDY 416 (638)
Q Consensus 357 ~~~~l~~~i~~~~pDfvl~~GDi~y~~g~--~~~wd~f~~~l~~l~-------~~vP~~~v~GNHD~~~ 416 (638)
..+.+.+.+.+.+||+|+++||+++.... ..+|.+..+.++.+. ..+|++.++||||...
T Consensus 33 ~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 33 MRRAFKTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHHHHHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 33444455567899999999999975432 245665555444432 2689999999999853
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.2e-07 Score=92.43 Aligned_cols=171 Identities=13% Similarity=0.107 Sum_probs=98.6
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEec
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAI 409 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 409 (638)
+++++||+|.+.... ...+.+.+.++..++|.|+|+||+++ ...+ +.++.+ ..|++.+.
T Consensus 1 ~i~viSDtHl~~~~~-----------~~~~~~~~~~~~~~~d~iih~GDi~~----~~~~----~~l~~~--~~~~~~V~ 59 (178)
T cd07394 1 LVLVIGDLHIPHRAS-----------DLPAKFKKLLVPGKIQHVLCTGNLCS----KETY----DYLKTI--APDVHIVR 59 (178)
T ss_pred CEEEEEecCCCCCch-----------hhHHHHHHHhccCCCCEEEECCCCCC----HHHH----HHHHhh--CCceEEEE
Confidence 478999999654221 12234444444468999999999985 2222 233332 24789999
Q ss_pred CCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhcccc
Q 046241 410 GNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVD 489 (638)
Q Consensus 410 GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~~ 489 (638)
||||... .+|. ...+++++.+
T Consensus 60 GN~D~~~-------------------------~lp~------~~~~~~~g~~---------------------------- 80 (178)
T cd07394 60 GDFDENL-------------------------NYPE------TKVITVGQFK---------------------------- 80 (178)
T ss_pred CCCCccc-------------------------cCCC------cEEEEECCEE----------------------------
Confidence 9999621 1221 1234444444
Q ss_pred CCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCCC
Q 046241 490 RSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSN 569 (638)
Q Consensus 490 r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~ 569 (638)
|.+.|--.+... .. .+.+..++++.++|++++||+|......
T Consensus 81 -------i~l~HG~~~~~~---~~---~~~~~~~~~~~~~dvii~GHTH~p~~~~------------------------- 122 (178)
T cd07394 81 -------IGLIHGHQVVPW---GD---PDSLAALQRQLDVDILISGHTHKFEAFE------------------------- 122 (178)
T ss_pred -------EEEEECCcCCCC---CC---HHHHHHHHHhcCCCEEEECCCCcceEEE-------------------------
Confidence 444443221110 01 2244555667889999999999765421
Q ss_pred CCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEcCCCcE
Q 046241 570 YSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTREV 628 (638)
Q Consensus 570 ~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~v 628 (638)
.++.+.+--|+.|....+... .....|+.++++++.+.++.+...++++
T Consensus 123 ~~g~~viNPGSv~~~~~~~~~----------~~~~syail~~~~~~~~~~~~~l~~~~~ 171 (178)
T cd07394 123 HEGKFFINPGSATGAFSPLDP----------NVIPSFVLMDIQGSKVVTYVYQLIDGEV 171 (178)
T ss_pred ECCEEEEECCCCCCCCCCCCC----------CCCCeEEEEEecCCeEEEEEEEEECCcE
Confidence 023456667777643221000 0123689999988889999988655554
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.7e-09 Score=107.95 Aligned_cols=176 Identities=16% Similarity=0.184 Sum_probs=95.8
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHh--hCCCccEEEEeCCcccCC-C---cHHHHHHHHHhhhhhccC
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEV--DNGSVDSIFHIGDISYAT-G---FLVEWDFFLHQISPVASR 402 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i--~~~~pDfvl~~GDi~y~~-g---~~~~wd~f~~~l~~l~~~ 402 (638)
+|+++++|+|.+.... ...+++.+.+ .+.++|+|+++||+++.- + .....+...+.++.+...
T Consensus 1 M~i~~iSDlHl~~~~~-----------~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~ 69 (241)
T PRK05340 1 MPTLFISDLHLSPERP-----------AITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS 69 (241)
T ss_pred CcEEEEeecCCCCCCh-----------hHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc
Confidence 4799999999865321 1122232222 236899999999999631 1 112234455556665543
Q ss_pred -cceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHH
Q 046241 403 -VSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWM 481 (638)
Q Consensus 403 -vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL 481 (638)
+|++.++||||..... .+.+...+..- .....++.++.++++.-.... ...+..++++
T Consensus 70 g~~v~~v~GNHD~~~~~-----------------~~~~~~g~~~l---~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~ 128 (241)
T PRK05340 70 GVPCYFMHGNRDFLLGK-----------------RFAKAAGMTLL---PDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRF 128 (241)
T ss_pred CCeEEEEeCCCchhhhH-----------------HHHHhCCCEEe---CCcEEEEECCEEEEEECCccc-ccCCHHHHHH
Confidence 8999999999973211 11111111000 012346777777776654322 1233555555
Q ss_pred HHHhccccCCCCCeEEEEeccCCccCC-------------C-C----CCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 482 KKDMASVDRSKTPWLIFSGHRPMYSSL-------------S-S----SVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 482 ~~~La~~~r~~~~w~IV~~H~P~yss~-------------~-~----~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
.+.++. ||...++|.+++... . . .......+.+.+++.+++++++++||.|....
T Consensus 129 r~~~r~------~~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 129 RRKVRN------PWLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHhC------HHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 555543 122333344433211 0 0 00001135677888999999999999998764
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.5e-09 Score=101.68 Aligned_cols=179 Identities=16% Similarity=0.178 Sum_probs=97.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHH------------------
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWD------------------ 390 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd------------------ 390 (638)
-++++++|.+. ..+.++++.+.+.+..+|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g--------------~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~ 71 (255)
T PF14582_consen 6 RKILAISNFRG--------------DFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEE 71 (255)
T ss_dssp -EEEEEE--TT---------------HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHH
T ss_pred hhheeecCcch--------------HHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhh
Confidence 57899999773 4577888888888889999999999987666666777
Q ss_pred --------HHHHhhhhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEE
Q 046241 391 --------FFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHF 462 (638)
Q Consensus 391 --------~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~f 462 (638)
.|++.+..+ .+|.+++|||||-.... | ...+|....-.|.--.-..-+.+--|.+-|
T Consensus 72 ~~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~~~-----~--------lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v 136 (255)
T PF14582_consen 72 CYDSEALDKFFRILGEL--GVPVFVVPGNMDAPERF-----F--------LREAYNAEIVTPHIHNVHESFFFWKGEYLV 136 (255)
T ss_dssp HHHHHHHHHHHHHHHCC---SEEEEE--TTS-SHHH-----H--------HHHHHHCCCC-TTEEE-CTCEEEETTTEEE
T ss_pred hhhHHHHHHHHHHHHhc--CCcEEEecCCCCchHHH-----H--------HHHHhccceeccceeeeeeeecccCCcEEE
Confidence 677777654 79999999999962100 0 001222111111100000112222234677
Q ss_pred EEEeCCCC-------CC--CcHHHHHHHHHHhccccCCCCCeEEEEeccCC-ccCC-CCCCCHHHHHHHHHHHHhCCCeE
Q 046241 463 TVMSTEHD-------WS--ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPM-YSSL-SSSVDNKFVDAVEPLLLDNKVDL 531 (638)
Q Consensus 463 i~LDT~~~-------~~--~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~-yss~-~~~~~~~~r~~l~~Ll~k~~Vdl 531 (638)
+.+..+.. +. -.....+|..+.|..++ ..-+|+++|.|+ +..+ .+.+ .+.+..++++|+.++
T Consensus 137 ~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~G----S~~V~dlIk~~~P~i 209 (255)
T PF14582_consen 137 AGMGGEITDDQREEEFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHVG----SAAVRDLIKTYNPDI 209 (255)
T ss_dssp EEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTTS----BHHHHHHHHHH--SE
T ss_pred EecCccccCCCccccccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccccc----HHHHHHHHHhcCCcE
Confidence 77665420 10 12234566667777642 334788899999 4443 2222 356788999999999
Q ss_pred EEEcccccccee
Q 046241 532 ALFGHVHNYERT 543 (638)
Q Consensus 532 vlsGH~H~YeRt 543 (638)
+|+||.|.-.-.
T Consensus 210 vl~Ghihe~~~~ 221 (255)
T PF14582_consen 210 VLCGHIHESHGK 221 (255)
T ss_dssp EEE-SSS-EE--
T ss_pred EEecccccchhh
Confidence 999999985533
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.3e-09 Score=96.01 Aligned_cols=115 Identities=23% Similarity=0.292 Sum_probs=76.5
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEec
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAI 409 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 409 (638)
||+++||+|.... .+...++|+|+++||+++. +...+++.+.+.++.+. ..++++++
T Consensus 1 ~i~~isD~H~~~~---------------------~~~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~ 57 (135)
T cd07379 1 RFVCISDTHSRHR---------------------TISIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIA 57 (135)
T ss_pred CEEEEeCCCCCCC---------------------cCcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEE
Confidence 5899999996421 1234689999999999854 44555666666665542 22357899
Q ss_pred CCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhcccc
Q 046241 410 GNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVD 489 (638)
Q Consensus 410 GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~~ 489 (638)
||||.. . . +
T Consensus 58 GNHD~~--~------------------------------~-----------------------------------~---- 66 (135)
T cd07379 58 GNHDLT--L------------------------------D-----------------------------------P---- 66 (135)
T ss_pred CCCCCc--C------------------------------C-----------------------------------C----
Confidence 999951 0 0 1
Q ss_pred CCCCCeEEEEeccCCccCCCCCC--CHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 490 RSKTPWLIFSGHRPMYSSLSSSV--DNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 490 r~~~~w~IV~~H~P~yss~~~~~--~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
..+.|+++|.|++....... .....+.+..++++++++++++||+|...
T Consensus 67 ---~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 ---EDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred ---CCCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 12368888999976542211 11223456777788999999999999975
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.2e-09 Score=102.01 Aligned_cols=109 Identities=17% Similarity=0.215 Sum_probs=71.9
Q ss_pred HhhCCCccEEEEeCCcccCCCc--HHHHHHHHHhhhhh---ccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhcc
Q 046241 364 EVDNGSVDSIFHIGDISYATGF--LVEWDFFLHQISPV---ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYE 438 (638)
Q Consensus 364 ~i~~~~pDfvl~~GDi~y~~g~--~~~wd~f~~~l~~l---~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~ 438 (638)
.+...+||+|+++||+++.+.. ..+|.+..+.+.++ ...+|++.++||||.+... . +...+....|+
T Consensus 37 a~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~--~------~~~~~~v~RF~ 108 (195)
T cd08166 37 ALNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEE--E------DPIESKIRRFE 108 (195)
T ss_pred HHhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCC--C------CcCHHHHHHHH
Confidence 3455789999999999976542 33455444444443 2468999999999985322 0 00001112232
Q ss_pred ccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHH
Q 046241 439 TYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVD 518 (638)
Q Consensus 439 ~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~ 518 (638)
++| |++.|.|+..... .
T Consensus 109 ~~F-------------------------------------------------------i~lsH~P~~~~~~--------~ 125 (195)
T cd08166 109 KYF-------------------------------------------------------IMLSHVPLLAEGG--------Q 125 (195)
T ss_pred Hhh-------------------------------------------------------eeeeccccccccc--------H
Confidence 222 8889999875332 2
Q ss_pred HHHHHHHhCCCeEEEEcccccccee
Q 046241 519 AVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 519 ~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
.+..++.+++++++|+||.|.+...
T Consensus 126 ~~~~~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 126 ALKHVVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred HHHHHHHhcCceEEEEcCccceeeE
Confidence 6677888999999999999998764
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.4e-09 Score=100.23 Aligned_cols=82 Identities=13% Similarity=0.210 Sum_probs=49.4
Q ss_pred EEEecCCCCCCCCCcccccC--CChHHHHHHHHHHhhCCCccEEEEeCCcccCCC--cHHHHHHHHHhhhhhc---cCcc
Q 046241 332 LTYGDMGKAPLDDSAEHYIQ--PGSLSVIKAMADEVDNGSVDSIFHIGDISYATG--FLVEWDFFLHQISPVA---SRVS 404 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~~~~~--pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g--~~~~wd~f~~~l~~l~---~~vP 404 (638)
++++|+|....... ...+ .....+.+.+.+.+++.+||+|+++||++++.. ...+|..+...+..+. ...|
T Consensus 1 ~~isD~HL~~~~~~--~~l~~~~~~~~~~~~~~~~i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (156)
T cd08165 1 MFLADTHLLGSILG--HWLDKLRREWQMERSFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLP 78 (156)
T ss_pred CccccchhcCCccc--HHHHHHhhhHHHHHHHHHHHHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCe
Confidence 36789997432210 0000 001123334555566789999999999997542 2345655555444443 2589
Q ss_pred eEEecCCCccC
Q 046241 405 YMTAIGNHERD 415 (638)
Q Consensus 405 ~~~v~GNHD~~ 415 (638)
++.++||||..
T Consensus 79 i~~v~GNHD~~ 89 (156)
T cd08165 79 LHVVVGNHDIG 89 (156)
T ss_pred EEEEcCCCCcC
Confidence 99999999973
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.6e-07 Score=89.48 Aligned_cols=174 Identities=17% Similarity=0.222 Sum_probs=104.3
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCC-CcHHHHHHHHHhhhhhc-cCcce
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT-GFLVEWDFFLHQISPVA-SRVSY 405 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~-g~~~~wd~f~~~l~~l~-~~vP~ 405 (638)
.+|+++++|+|.. ...++++.+.++..++|+++.+||++|.. +...+-.+-.. ++.+. ..+|+
T Consensus 3 ~mkil~vtDlHg~--------------~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~-~e~l~~~~~~v 67 (226)
T COG2129 3 KMKILAVTDLHGS--------------EDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNK-LEALKELGIPV 67 (226)
T ss_pred cceEEEEeccccc--------------hHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhH-HHHHHhcCCeE
Confidence 3899999999964 34556676666667999999999999432 22211111100 33333 57999
Q ss_pred EEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCC--CC----CCcHHH-H
Q 046241 406 MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEH--DW----SENSEQ-Y 478 (638)
Q Consensus 406 ~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~--~~----~~~~~Q-~ 478 (638)
++++||-|-..-. ...+.....-. + -..+.|++.|+.+--.. .+ ...+++ +
T Consensus 68 ~avpGNcD~~~v~-----------------~~l~~~~~~v~---~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 68 LAVPGNCDPPEVI-----------------DVLKNAGVNVH---G--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred EEEcCCCChHHHH-----------------HHHHhcccccc---c--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 9999998842110 00000111100 1 36778888888754321 11 122332 3
Q ss_pred HHHHHHhccccCCCCCeEEEEeccCCccCCCCC--C-CHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 479 EWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSS--V-DNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 479 ~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~--~-~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
.-|++-+...+ .+-.|+++|.|+|...... + .....+.+.+++++.++-+.++||.|-+.
T Consensus 126 s~l~~~v~~~~---~~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~ 188 (226)
T COG2129 126 SKLKSLVKKAD---NPVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESR 188 (226)
T ss_pred HHHHHHHhccc---CcceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccc
Confidence 44444444432 1223999999999766331 1 22346788899999999999999999854
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.1e-07 Score=99.24 Aligned_cols=84 Identities=17% Similarity=0.139 Sum_probs=56.7
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc-HHHHHHHHHhhhh---------
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF-LVEWDFFLHQISP--------- 398 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~-~~~wd~f~~~l~~--------- 398 (638)
+||++++|+|.+..... .........+++++++.+.+.++|+||++||+.+.... ......+++.++.
T Consensus 4 mKIlh~SD~HlG~~~~~--~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~ 81 (405)
T TIGR00583 4 IRILVSTDNHVGYGEND--PVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCE 81 (405)
T ss_pred eEEEEEcCCCCCCccCC--chhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccc
Confidence 99999999998743211 11112245677888888888999999999999976432 2222233333332
Q ss_pred ------------------h-------ccCcceEEecCCCcc
Q 046241 399 ------------------V-------ASRVSYMTAIGNHER 414 (638)
Q Consensus 399 ------------------l-------~~~vP~~~v~GNHD~ 414 (638)
+ ...+|++++.||||.
T Consensus 82 ~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~ 122 (405)
T TIGR00583 82 LEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDD 122 (405)
T ss_pred hhhccchhhhcccccccccccccccccCCCCEEEEcCCCCC
Confidence 0 136999999999996
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3e-07 Score=89.75 Aligned_cols=70 Identities=13% Similarity=0.176 Sum_probs=47.4
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcH-----HHHHHHHHhhhhhccCc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFL-----VEWDFFLHQISPVASRV 403 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~-----~~wd~f~~~l~~l~~~v 403 (638)
+|++++||+|.. ...++++.+.+++.++|.|+++||+++..... ...++..+.++.+ ..
T Consensus 1 mri~viSD~Hg~--------------~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 64 (182)
T PRK09453 1 MKLMFASDTHGS--------------LPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--AD 64 (182)
T ss_pred CeEEEEEeccCC--------------HHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CC
Confidence 589999999943 23456677767678999999999998532210 0123334444432 35
Q ss_pred ceEEecCCCcc
Q 046241 404 SYMTAIGNHER 414 (638)
Q Consensus 404 P~~~v~GNHD~ 414 (638)
+++.+.||||.
T Consensus 65 ~v~~V~GNhD~ 75 (182)
T PRK09453 65 KIIAVRGNCDS 75 (182)
T ss_pred ceEEEccCCcc
Confidence 89999999996
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.9e-08 Score=90.44 Aligned_cols=187 Identities=17% Similarity=0.135 Sum_probs=99.2
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC--CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN--GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~ 406 (638)
+++..++|+|...........+.+++...-++|.+.... ..-|.|+..|||+.+....+.- .=++.+..+. .+ -+
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea~-~Dl~~i~~LP-G~-K~ 77 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEAE-EDLRFIGDLP-GT-KY 77 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhhh-hhhhhhhcCC-Cc-EE
Confidence 367788888876544322222333333333444443221 3458999999999887543322 2233444432 22 36
Q ss_pred EecCCCccCCCCCCCCcccCCCCCCccchhccc-cccCCCCCCCCCeEEEEECCEEEEEEe---CC-CCCCCcHHH----
Q 046241 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYET-YFPMPIPARDKPWYSIEQAGVHFTVMS---TE-HDWSENSEQ---- 477 (638)
Q Consensus 407 ~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~-~f~~P~~~~~~~yYsfd~G~v~fi~LD---T~-~~~~~~~~Q---- 477 (638)
.+.||||+.+.. -+.. ...+.. .|.+ .-.|.++++.++..- +- .++.+-++|
T Consensus 78 m~rGNHDYWw~s--~skl---------~n~lp~~l~~~--------n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki 138 (230)
T COG1768 78 MIRGNHDYWWSS--ISKL---------NNALPPILFYL--------NNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKI 138 (230)
T ss_pred EEecCCccccch--HHHH---------HhhcCchHhhh--------ccceeEeeEEEEEeecccCCCCCcCccchhHHHH
Confidence 689999997643 1100 001100 0000 012455554443322 11 112222233
Q ss_pred ----HHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEcccccccee
Q 046241 478 ----YEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 478 ----~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
+.-|+..+.++-++...-.|||.|+|+++.....+ .+.+++++++|+.++.||.|.-.|-
T Consensus 139 ~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~~------~~sevlee~rv~~~lyGHlHgv~~p 202 (230)
T COG1768 139 FLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTPG------PFSEVLEEGRVSKCLYGHLHGVPRP 202 (230)
T ss_pred HHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCCc------chHHHHhhcceeeEEeeeccCCCCC
Confidence 23333322222234455589999999998765443 4667788999999999999998873
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.8e-07 Score=87.76 Aligned_cols=62 Identities=18% Similarity=0.319 Sum_probs=40.9
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC-CccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG-SVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
+|++++||+|.... .++.+.+.++.. ++|.|+++||++. . ...+.++.+ ..|++.
T Consensus 1 m~i~viSD~H~~~~--------------~~~~~~~~~~~~~~~d~ii~~GD~~~----~----~~~~~l~~~--~~~~~~ 56 (158)
T TIGR00040 1 MKILVISDTHGPLR--------------ATELPVELFNLESNVDLVIHAGDLTS----P----FVLKEFEDL--AAKVIA 56 (158)
T ss_pred CEEEEEecccCCcc--------------hhHhHHHHHhhccCCCEEEEcCCCCC----H----HHHHHHHHh--CCceEE
Confidence 58999999995421 123333444444 8999999999982 1 122333332 458999
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 57 V~GN~D~ 63 (158)
T TIGR00040 57 VRGNNDG 63 (158)
T ss_pred EccCCCc
Confidence 9999995
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.7e-07 Score=96.11 Aligned_cols=188 Identities=18% Similarity=0.157 Sum_probs=95.1
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHH--HHHHHHHhhhhhccCcce
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVD-SIFHIGDISYATGFLV--EWDFFLHQISPVASRVSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~--~wd~f~~~l~~l~~~vP~ 405 (638)
++|+.++|+|...... .+.+....+..+++++++.++| +++.+||++....... ......+.+..+ -.-
T Consensus 1 l~i~~~sD~hg~~~~~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~---g~d 72 (252)
T cd00845 1 LTILHTNDLHGHFEPA-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL---GYD 72 (252)
T ss_pred CEEEEecccccCcccc-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc---CCC
Confidence 4799999999432110 1223456677777887777888 7789999985433211 112233333332 234
Q ss_pred EEecCCCccCCCCCCCCcccCCCCCCccchhcc-ccc-cC---CCCCCCCCeEEEEECCEEEEEEe--CCCCCC------
Q 046241 406 MTAIGNHERDYLGSSGSVYESPDSGGECGVAYE-TYF-PM---PIPARDKPWYSIEQAGVHFTVMS--TEHDWS------ 472 (638)
Q Consensus 406 ~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~-~~f-~~---P~~~~~~~yYsfd~G~v~fi~LD--T~~~~~------ 472 (638)
++++||||++... .+ ...... +...++. ... .. ........|..++.+++++-++. +.....
T Consensus 73 ~~~~GNHe~d~g~-~~-l~~~~~---~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~ 147 (252)
T cd00845 73 AVTIGNHEFDYGL-DA-LAELYK---DANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGW 147 (252)
T ss_pred EEeeccccccccH-HH-HHHHHH---hCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCc
Confidence 5678999986432 00 000000 0000000 000 00 00001234667788886554443 321100
Q ss_pred ----CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 473 ----ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 473 ----~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
......+.+++..+.. +.+...+|++.|.+... + ..+...+ .+||++|+||.|....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~------~----~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 148 IIGLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDD------D----EELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred ccCceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccc------h----HHHHhcC--CCccEEEcCCcCcccC
Confidence 0012233343322221 24677899999988642 1 1221112 5899999999998764
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.8e-07 Score=94.96 Aligned_cols=74 Identities=18% Similarity=0.180 Sum_probs=45.1
Q ss_pred EEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccC----CCcHHHHHHHHHhhhhhcc-CcceE
Q 046241 332 LTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYA----TGFLVEWDFFLHQISPVAS-RVSYM 406 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~----~g~~~~wd~f~~~l~~l~~-~vP~~ 406 (638)
++++|+|.+..... .....++.+.+.. .+||+|+++||+++. .......+.+.+.++.+.. ..|++
T Consensus 2 ~~iSDlHl~~~~~~-------~~~~~l~~l~~~~--~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPERPD-------ITALFLDFLREEA--RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCChh-------HHHHHHHHHHhhh--ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 68999998753210 0112233333222 379999999999962 1112223445555666543 58999
Q ss_pred EecCCCcc
Q 046241 407 TAIGNHER 414 (638)
Q Consensus 407 ~v~GNHD~ 414 (638)
+++||||+
T Consensus 73 ~v~GNHD~ 80 (231)
T TIGR01854 73 FMHGNRDF 80 (231)
T ss_pred EEcCCCch
Confidence 99999997
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.3e-07 Score=95.44 Aligned_cols=166 Identities=19% Similarity=0.159 Sum_probs=98.9
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc---------------------HHH
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF---------------------LVE 388 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~---------------------~~~ 388 (638)
||++.++.+..... ......+.....+.+||++||+||.+|++.. ..+
T Consensus 1 r~a~~SC~~~~~~~-----------~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (228)
T cd07389 1 RFAFGSCNKYESGY-----------FNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEE 69 (228)
T ss_pred CEEEEECCCCCCCC-----------cHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHH
Confidence 47777876654322 1222222211246899999999999999842 111
Q ss_pred HH----HHH--HhhhhhccCcceEEecCCCccCCCCCCCCccc-CC--C---CCCccchhccccccCCCCC-----CCCC
Q 046241 389 WD----FFL--HQISPVASRVSYMTAIGNHERDYLGSSGSVYE-SP--D---SGGECGVAYETYFPMPIPA-----RDKP 451 (638)
Q Consensus 389 wd----~f~--~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~-~~--d---s~ge~~~~y~~~f~~P~~~-----~~~~ 451 (638)
+. .++ ..++.+.+++|++.++.+||+..+. .+.... .. . ........|..+.+.+... ....
T Consensus 70 ~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~-~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~ 148 (228)
T cd07389 70 YRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNW-GGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGI 148 (228)
T ss_pred HHHHHHHHcCCHHHHHHhhcCCEEEecccccccccc-ccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceE
Confidence 21 111 2345667889999999999996544 111000 00 0 0011223455555554332 2457
Q ss_pred eEEEEECCE-EEEEEeCCCCCCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhC--C
Q 046241 452 WYSIEQAGV-HFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN--K 528 (638)
Q Consensus 452 yYsfd~G~v-~fi~LDT~~~~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~--~ 528 (638)
|+++.+|.. .|++||++... ..+.....-|+++..++.+. +
T Consensus 149 y~~~~~G~~~~~~~lD~R~~R------------------------------------d~W~~~~~er~~l~~~~~~~~~~ 192 (228)
T cd07389 149 YRSFRFGDLVDLILLDTRTYR------------------------------------DSWDGYPAERERLLDLLAKRKIK 192 (228)
T ss_pred EEEEecCCcceEEEEeccccc------------------------------------ccccccHHHHHHHHHHHHHhCCC
Confidence 999999996 99999998754 22334445577777775544 3
Q ss_pred CeEEEEcccccccee
Q 046241 529 VDLALFGHVHNYERT 543 (638)
Q Consensus 529 VdlvlsGH~H~YeRt 543 (638)
--++|+|++|..+-.
T Consensus 193 ~vv~lSGDvH~~~~~ 207 (228)
T cd07389 193 NVVFLSGDVHLAEAS 207 (228)
T ss_pred CeEEEecHHHHHHHh
Confidence 338899999987754
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.6e-07 Score=100.32 Aligned_cols=180 Identities=16% Similarity=0.229 Sum_probs=104.2
Q ss_pred HHHHHHHHHHhhC--CCccEEEEeCCcccCCCc----HH---HHHHHHHhhhhhccCcceEEecCCCccCCCCCCCCccc
Q 046241 355 LSVIKAMADEVDN--GSVDSIFHIGDISYATGF----LV---EWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYE 425 (638)
Q Consensus 355 ~~~~~~l~~~i~~--~~pDfvl~~GDi~y~~g~----~~---~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~ 425 (638)
..+++.+++.+++ .++|+|+++||++-.+.. .. ......+.+......+|+++++||||...... +.
T Consensus 194 ~~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~----F~ 269 (577)
T KOG3770|consen 194 KRLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL----FA 269 (577)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh----cC
Confidence 4566666666654 349999999999854311 11 11234445566667999999999999854331 10
Q ss_pred CCCCCCccch--hcccc---c--cCCCCCC----CCCeEEE-EECCEEEEEEeCCCC----------CCCcHHHHHHHHH
Q 046241 426 SPDSGGECGV--AYETY---F--PMPIPAR----DKPWYSI-EQAGVHFTVMSTEHD----------WSENSEQYEWMKK 483 (638)
Q Consensus 426 ~~ds~ge~~~--~y~~~---f--~~P~~~~----~~~yYsf-d~G~v~fi~LDT~~~----------~~~~~~Q~~WL~~ 483 (638)
.......... .|++. | .+|.... .+.+|.- -+++.++|+||+..- -.....|++|+..
T Consensus 270 ~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~ 349 (577)
T KOG3770|consen 270 PGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVD 349 (577)
T ss_pred CCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHH
Confidence 0000000000 11111 1 1232221 2345654 368999999999641 1345788999999
Q ss_pred HhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhC--CCeEEEEccccccce
Q 046241 484 DMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN--KVDLALFGHVHNYER 542 (638)
Q Consensus 484 ~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~--~VdlvlsGH~H~YeR 542 (638)
+|.++. ++..-+=+++|.|+-.... .......+-.++.++ -+...|.||.|.-+-
T Consensus 350 ~L~~ae-~~GekVhil~HIPpG~~~c---~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f 406 (577)
T KOG3770|consen 350 QLQEAE-SAGEKVHILGHIPPGDGVC---LEGWSINFYRIVNRFRSTIAGQFYGHTHIDEF 406 (577)
T ss_pred HHHHHH-hcCCEEEEEEeeCCCCcch---hhhhhHHHHHHHHHHHHhhhhhccccCcceeE
Confidence 999875 3444466779999854221 122233444555554 244669999998663
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.4e-07 Score=92.39 Aligned_cols=59 Identities=14% Similarity=0.224 Sum_probs=36.4
Q ss_pred HHHHHHHHh-hCCCccEEEEeCCcccCCCc--HHHHH----HHHHhhhhhc----------------cCcceEEecCCCc
Q 046241 357 VIKAMADEV-DNGSVDSIFHIGDISYATGF--LVEWD----FFLHQISPVA----------------SRVSYMTAIGNHE 413 (638)
Q Consensus 357 ~~~~l~~~i-~~~~pDfvl~~GDi~y~~g~--~~~wd----~f~~~l~~l~----------------~~vP~~~v~GNHD 413 (638)
.++.+.+.+ ...+||.|+++||+... +. .++|. .|.+.+-+-. ..+|++.++||||
T Consensus 31 YL~~~~~~~~~~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHD 109 (193)
T cd08164 31 FLGHIVSMMQFWLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHD 109 (193)
T ss_pred HHHHHHHHHHHhcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCccc
Confidence 334444433 34799999999999954 33 34453 3333321100 1489999999999
Q ss_pred cCC
Q 046241 414 RDY 416 (638)
Q Consensus 414 ~~~ 416 (638)
..+
T Consensus 110 IG~ 112 (193)
T cd08164 110 VGY 112 (193)
T ss_pred CCC
Confidence 854
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.6e-07 Score=93.79 Aligned_cols=191 Identities=17% Similarity=0.196 Sum_probs=99.9
Q ss_pred EEEEEEecCCCCCCCCCc--ccccCCChHHHHHHHHHHhhCCCccEEEE-eCCcccCCCcHHHHH---------HHHHhh
Q 046241 329 LRFLTYGDMGKAPLDDSA--EHYIQPGSLSVIKAMADEVDNGSVDSIFH-IGDISYATGFLVEWD---------FFLHQI 396 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~--~~~~~pg~~~~~~~l~~~i~~~~pDfvl~-~GDi~y~~g~~~~wd---------~f~~~l 396 (638)
++|+.++|+|..-..... ......+....+..+++++++.++|.+++ +||+..... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 478999999954211000 00011244566777888877778888776 999985332 12221 233444
Q ss_pred hhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCC---------C--CCCCCCeEEEEEC-CEEEEE
Q 046241 397 SPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMP---------I--PARDKPWYSIEQA-GVHFTV 464 (638)
Q Consensus 397 ~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P---------~--~~~~~~yYsfd~G-~v~fi~ 464 (638)
..+ ... +.++||||+++.. . .. ....+....| . ......|..++.+ ++++-+
T Consensus 80 n~~--g~d-~~~lGNHe~d~g~-~--~l----------~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgv 143 (277)
T cd07410 80 NAL--GYD-AGTLGNHEFNYGL-D--YL----------DKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGI 143 (277)
T ss_pred Hhc--CCC-EEeecccCcccCH-H--HH----------HHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEE
Confidence 433 233 5678999986432 0 00 0000111111 0 0012457778888 866555
Q ss_pred EeCCCCC---------------CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh-CC
Q 046241 465 MSTEHDW---------------SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD-NK 528 (638)
Q Consensus 465 LDT~~~~---------------~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k-~~ 528 (638)
+.-.... ....+..++..+.|++ .+...+|+++|.+......... ..+.....|.++ .+
T Consensus 144 iG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~--~~~~~~~~la~~~~~ 218 (277)
T cd07410 144 IGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESL--TGENAAYELAEEVPG 218 (277)
T ss_pred EecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccccc--CCccHHHHHHhcCCC
Confidence 5432111 1112234444445543 4677899999998754321000 111122334444 58
Q ss_pred CeEEEEccccccc
Q 046241 529 VDLALFGHVHNYE 541 (638)
Q Consensus 529 VdlvlsGH~H~Ye 541 (638)
||++|.||.|...
T Consensus 219 vD~IlgGHsH~~~ 231 (277)
T cd07410 219 IDAILTGHQHRRF 231 (277)
T ss_pred CcEEEeCCCcccc
Confidence 9999999999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.6e-07 Score=92.86 Aligned_cols=187 Identities=18% Similarity=0.204 Sum_probs=96.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHHHH---HHHHHhhhhhccCcc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVD-SIFHIGDISYATGFLVEW---DFFLHQISPVASRVS 404 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~~w---d~f~~~l~~l~~~vP 404 (638)
++++.+.|+|.-.... ..+.+....+..+++++++.+++ +++.+||++.... ...+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~~----~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l~~l--~~- 72 (257)
T cd07406 1 FTILHFNDVYEIAPLD----GGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSL-LSTATKGKQMVPVLNAL--GV- 72 (257)
T ss_pred CeEEEEccceeecccC----CCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCcc-chhhcCCccHHHHHHhc--CC-
Confidence 4789999998322110 11224466777777877777788 8999999985332 2122 2233333332 22
Q ss_pred eEEecCCCccCCCCCCCCcccCCCCCCccchhccc-cccCCCC-C---CCCCeEEEEECCEEE--EEEeCCCCC------
Q 046241 405 YMTAIGNHERDYLGSSGSVYESPDSGGECGVAYET-YFPMPIP-A---RDKPWYSIEQAGVHF--TVMSTEHDW------ 471 (638)
Q Consensus 405 ~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~-~f~~P~~-~---~~~~yYsfd~G~v~f--i~LDT~~~~------ 471 (638)
-+.++||||+++.. . .+.. .-.+...++.. ....... . .-+.|..++.+++++ +.+.+....
T Consensus 73 d~~~~GNHefd~g~-~--~l~~--~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 DLACFGNHEFDFGE-D--QLQK--RLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred cEEeecccccccCH-H--HHHH--HHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 36689999986422 0 0000 00000001100 0000000 0 124577888898654 555443211
Q ss_pred C---CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh-CCCeEEEEccccccc
Q 046241 472 S---ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD-NKVDLALFGHVHNYE 541 (638)
Q Consensus 472 ~---~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~Ye 541 (638)
. .-.+-.+.+++.+++..+.+...+|++.|-+... + ..+.++ .+||++|.||.|..+
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~------d-------~~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRLPN------D-------KRLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------h-------HHHHHhCCCCceEEecccceeE
Confidence 0 0112233344444333235678899999987531 1 123333 489999999999866
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.4e-06 Score=91.48 Aligned_cols=210 Identities=16% Similarity=0.185 Sum_probs=99.2
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHHHH---HHHHHhhhhhccCcc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVD-SIFHIGDISYATGFLVEW---DFFLHQISPVASRVS 404 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~~w---d~f~~~l~~l~~~vP 404 (638)
++|+.++|+|..-.........+.+....+..+++++++.+++ +++.+||++........+ +...+.+..+ ..-
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~--g~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAM--GVD 78 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhh--CCe
Confidence 4789999999542211000011223456667777777665565 888999998533322222 2223333322 222
Q ss_pred eEEecCCCccCCCCCCCC--cccC-CCCCCcc--chhcc-ccccC-----CCCC----CCCCeEEEEECCEEE--EEEeC
Q 046241 405 YMTAIGNHERDYLGSSGS--VYES-PDSGGEC--GVAYE-TYFPM-----PIPA----RDKPWYSIEQAGVHF--TVMST 467 (638)
Q Consensus 405 ~~~v~GNHD~~~~~~sgs--~y~~-~ds~ge~--~~~y~-~~f~~-----P~~~----~~~~yYsfd~G~v~f--i~LDT 467 (638)
+.++||||+++.. ..- .... .+..-.| ...|+ ..|++ .... .-..|.-++.+++++ |.+-+
T Consensus 79 -a~t~GNHefd~G~-~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl~~ 156 (288)
T cd07412 79 -ASAVGNHEFDEGY-AELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGAVT 156 (288)
T ss_pred -eeeecccccccCH-HHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEeecC
Confidence 5678999997532 000 0000 0000000 00000 01111 0000 013466678888654 44433
Q ss_pred CCC--C-C-------CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh--CCCeEEEEc
Q 046241 468 EHD--W-S-------ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD--NKVDLALFG 535 (638)
Q Consensus 468 ~~~--~-~-------~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k--~~VdlvlsG 535 (638)
... + . .-..-.+-+++.+++....+...+|++.|.....................++.+ .+||++|.|
T Consensus 157 ~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~l~~~~~~~iD~IlgG 236 (288)
T cd07412 157 KDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDTCSAASGPIADIVNRLDPDVDVVFAG 236 (288)
T ss_pred CCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCccccccChhHHHHHhhcCCCCCEEEeC
Confidence 210 0 0 011223344444444332467889999998875332211111111122334444 479999999
Q ss_pred cccccce
Q 046241 536 HVHNYER 542 (638)
Q Consensus 536 H~H~YeR 542 (638)
|.|....
T Consensus 237 HsH~~~~ 243 (288)
T cd07412 237 HTHQAYN 243 (288)
T ss_pred ccCcccc
Confidence 9998764
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.5e-07 Score=84.30 Aligned_cols=48 Identities=17% Similarity=0.106 Sum_probs=32.0
Q ss_pred EEEEeccCCccCCCC-CCCHHHHHHHHHHHHhCCCeEEEEcccccccee
Q 046241 496 LIFSGHRPMYSSLSS-SVDNKFVDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 496 ~IV~~H~P~yss~~~-~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
.|+++|+|++..... .......+.+..++.+++++++|+||.|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGEDFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcccccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 467778877643211 001122457778888899999999999987654
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.8e-07 Score=88.81 Aligned_cols=184 Identities=14% Similarity=0.098 Sum_probs=92.3
Q ss_pred EEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCC-----CcHHHHHH-HHHhhhhhccCcce
Q 046241 332 LTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT-----GFLVEWDF-FLHQISPVASRVSY 405 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~-----g~~~~wd~-f~~~l~~l~~~vP~ 405 (638)
++++|+|.+.... ........+.......++|.++++||+++.- ......+. +...++......++
T Consensus 1 ~~iSDlHlg~~~~--------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v 72 (217)
T cd07398 1 LFISDLHLGDGGP--------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRV 72 (217)
T ss_pred CEeeeecCCCCCC--------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeE
Confidence 4789999876442 1222233333222235899999999999531 11111222 23344444568899
Q ss_pred EEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHh
Q 046241 406 MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDM 485 (638)
Q Consensus 406 ~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~L 485 (638)
+.++||||..... .+......... ......+.+++.+++++-... +......+.|+...+
T Consensus 73 ~~v~GNHD~~~~~-----------------~~~~~~~~~~~--~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~ 132 (217)
T cd07398 73 YYVPGNHDFLLGD-----------------FFAEELGLILL--PDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLG 132 (217)
T ss_pred EEECCCchHHHHh-----------------HHHHHcCCEEe--ccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHh
Confidence 9999999974221 11111000000 011225677888888776532 334445555555543
Q ss_pred ccccC------CCCCeEEEEeccCCccC----CC----CCCCHHHHHHHHHHHHhCCCeEEEEcccccccee
Q 046241 486 ASVDR------SKTPWLIFSGHRPMYSS----LS----SSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 486 a~~~r------~~~~w~IV~~H~P~yss----~~----~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
..... ..-.+..-........+ .. ........+.+..++.+++++++++||+|.....
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 133 RNPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred CcHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 32100 00000000000000000 00 0111234556677788899999999999987653
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.3e-06 Score=86.30 Aligned_cols=160 Identities=17% Similarity=0.088 Sum_probs=86.7
Q ss_pred CCccEEEEeCCcccCCCcH-----------HHHHHHHHhhhhhc-cCcceEEecCCCccCCCCCCCCcccCCCCCCccch
Q 046241 368 GSVDSIFHIGDISYATGFL-----------VEWDFFLHQISPVA-SRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGV 435 (638)
Q Consensus 368 ~~pDfvl~~GDi~y~~g~~-----------~~wd~f~~~l~~l~-~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~ 435 (638)
.++|++|++||+.-..... ..+..|.+.++... ..+|++++.||||-.. . +..-..|++..
T Consensus 27 ~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~~~-~-----l~~l~~gg~v~- 99 (262)
T cd00844 27 TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEASN-Y-----LWELPYGGWVA- 99 (262)
T ss_pred CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCCHH-H-----HHhhcCCCeec-
Confidence 5799999999996322111 12344544444332 4677899999999411 0 00000011100
Q ss_pred hccccccCCCCCCCCCeEEEEECCEEEEEEeCCC---CCC--------CcHHHHHHH-------HHHhccccCCCCCeEE
Q 046241 436 AYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEH---DWS--------ENSEQYEWM-------KKDMASVDRSKTPWLI 497 (638)
Q Consensus 436 ~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~---~~~--------~~~~Q~~WL-------~~~La~~~r~~~~w~I 497 (638)
.+.+.+- ....+.+++++|..|.... ++. ..+.+...+ .+.|... +.+--|
T Consensus 100 --~Ni~~Lg------~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDI 168 (262)
T cd00844 100 --PNIYYLG------YAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDI 168 (262)
T ss_pred --CcEEEec------CCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcE
Confidence 0001110 0124567899999887632 111 122333321 1122221 112358
Q ss_pred EEeccCCccCCCCCCC-----------------HHHHHHHHHHHHhCCCeEEEEccccc-cceecc
Q 046241 498 FSGHRPMYSSLSSSVD-----------------NKFVDAVEPLLLDNKVDLALFGHVHN-YERTCS 545 (638)
Q Consensus 498 V~~H~P~yss~~~~~~-----------------~~~r~~l~~Ll~k~~VdlvlsGH~H~-YeRt~p 545 (638)
+++|.|+......... ......+..|+++.+....|+||.|. |++..|
T Consensus 169 lLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 169 FLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred EEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecC
Confidence 9999999765432221 11245678899999999999999999 776644
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.8e-06 Score=85.90 Aligned_cols=187 Identities=18% Similarity=0.149 Sum_probs=93.6
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHH---HHHHHhhhhhccCcce
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEW---DFFLHQISPVASRVSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~w---d~f~~~l~~l~~~vP~ 405 (638)
++++.++|+|..-.... .+.+....+..+++++++.+.++++.+||++... ....+ ....+.+..+ ..-+
T Consensus 1 i~il~~~D~H~~~~~~~----~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs-~~~~~~~g~~~~~~ln~~--g~d~ 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDD----NNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGL-PISDLDKGETIIKIMNAV--GYDA 73 (257)
T ss_pred CEEEEeccCcccccCCC----CccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCc-hhhhhcCCcHHHHHHHhc--CCcE
Confidence 47999999996432110 1223455566677766555678999999998532 11112 1222333322 3344
Q ss_pred EEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCC---------C--CCCCeEEEEEC-CE--EEEEEeCCCC-
Q 046241 406 MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP---------A--RDKPWYSIEQA-GV--HFTVMSTEHD- 470 (638)
Q Consensus 406 ~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~---------~--~~~~yYsfd~G-~v--~fi~LDT~~~- 470 (638)
.++||||+++.. . ....+.+.+..|-- + .-..|.-++.+ ++ -|+.+.+...
T Consensus 74 -~~~GNHefd~G~-~------------~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~ 139 (257)
T cd07408 74 -VTPGNHEFDYGL-D------------RLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETA 139 (257)
T ss_pred -EccccccccCCH-H------------HHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcc
Confidence 468999986422 0 00011111111110 0 01235556777 64 4555554321
Q ss_pred -C-CC-------cHHHHHHHHHH-hccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEcccccc
Q 046241 471 -W-SE-------NSEQYEWMKKD-MASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNY 540 (638)
Q Consensus 471 -~-~~-------~~~Q~~WL~~~-La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 540 (638)
. .+ -.+-.+-+++. .....+.+...+|++.|.+.......... ..+.. .-.+||++|.||.|..
T Consensus 140 ~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~~~~----~~la~--~~~giDvIigGH~H~~ 213 (257)
T cd07408 140 TKTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSPWTS----TELAA--NVTGIDLIIDGHSHTT 213 (257)
T ss_pred cccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCCccH----HHHHH--hCCCceEEEeCCCccc
Confidence 0 00 00112223332 22211246788999999887543211111 12222 1248999999999987
Q ss_pred ce
Q 046241 541 ER 542 (638)
Q Consensus 541 eR 542 (638)
..
T Consensus 214 ~~ 215 (257)
T cd07408 214 IE 215 (257)
T ss_pred cc
Confidence 64
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.7e-06 Score=85.68 Aligned_cols=185 Identities=14% Similarity=0.123 Sum_probs=95.9
Q ss_pred EEEEEEecCCCCCCCCC--------cccccCCChHHHHHHHHHHhhCC-CccEE-EEeCCcccCCCcHHHHHHHHHhhhh
Q 046241 329 LRFLTYGDMGKAPLDDS--------AEHYIQPGSLSVIKAMADEVDNG-SVDSI-FHIGDISYATGFLVEWDFFLHQISP 398 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~--------~~~~~~pg~~~~~~~l~~~i~~~-~pDfv-l~~GDi~y~~g~~~~wd~f~~~l~~ 398 (638)
++|+..+|+|..-.... .....+.+....+..+++++++. ++|.+ +.+||+..... ...+......++.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ 79 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSG-EALYTRGQAMVDA 79 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCCh-HHhhcCChhHHHH
Confidence 46888999987532210 01111234567778888887776 89977 57999995432 2222211122222
Q ss_pred hccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCC-----------CCCCCCeEEEEECCEE--EEEE
Q 046241 399 VASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPI-----------PARDKPWYSIEQAGVH--FTVM 465 (638)
Q Consensus 399 l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~-----------~~~~~~yYsfd~G~v~--fi~L 465 (638)
+..+++.++.||||+++.. .+ .....+.+..|- ...-..|..++.++++ ||.+
T Consensus 80 -l~~~g~da~~GNHefd~g~-~~------------l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~ 145 (264)
T cd07411 80 -LNALGVDAMVGHWEFTYGP-ER------------VRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQ 145 (264)
T ss_pred -HHhhCCeEEecccccccCH-HH------------HHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEe
Confidence 2235665555999986432 00 000111111110 0001246667888855 4555
Q ss_pred eCCCCCC--C--------cHHHHHHHHHHhcccc-CCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh-CCCeEEE
Q 046241 466 STEHDWS--E--------NSEQYEWMKKDMASVD-RSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD-NKVDLAL 533 (638)
Q Consensus 466 DT~~~~~--~--------~~~Q~~WL~~~La~~~-r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k-~~Vdlvl 533 (638)
.+..... . .....+.+++.+++.. ..+...+|++.|.+... + ..+.++ .+||++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~------~-------~~la~~~~~iDlil 212 (264)
T cd07411 146 TFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV------D-------VELAERVPGIDVIL 212 (264)
T ss_pred ccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh------h-------HHHHhcCCCCcEEE
Confidence 4431100 0 1223444554433321 24577899999987531 1 122223 4799999
Q ss_pred Eccccccc
Q 046241 534 FGHVHNYE 541 (638)
Q Consensus 534 sGH~H~Ye 541 (638)
.||.|...
T Consensus 213 gGH~H~~~ 220 (264)
T cd07411 213 SGHTHERT 220 (264)
T ss_pred eCcccccc
Confidence 99999754
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.34 E-value=2e-06 Score=94.03 Aligned_cols=85 Identities=13% Similarity=0.193 Sum_probs=59.1
Q ss_pred EEEEEEecCCCCC-CCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc-HHHHHHHHHhhhhhc-cCcce
Q 046241 329 LRFLTYGDMGKAP-LDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF-LVEWDFFLHQISPVA-SRVSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~-~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~-~~~wd~f~~~l~~l~-~~vP~ 405 (638)
+||+..+|+|.+. ...... ........+.++++.+.+.++||||++||+.+.... ...-..+.+.++.+. .++|+
T Consensus 1 mkilHtSD~HLG~~~~~~~~--r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPS--RLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhhccCcc--chHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 5899999999983 221111 111235667778888888999999999999965432 222345556666554 58999
Q ss_pred EEecCCCccC
Q 046241 406 MTAIGNHERD 415 (638)
Q Consensus 406 ~~v~GNHD~~ 415 (638)
+++.||||..
T Consensus 79 ~~I~GNHD~~ 88 (390)
T COG0420 79 VVIAGNHDSP 88 (390)
T ss_pred EEecCCCCch
Confidence 9999999973
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.2e-06 Score=84.95 Aligned_cols=184 Identities=16% Similarity=0.151 Sum_probs=95.9
Q ss_pred EEEEEEecCCCCCCCCCc-------ccccCCChHHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHH--HHHHHHHhhhh
Q 046241 329 LRFLTYGDMGKAPLDDSA-------EHYIQPGSLSVIKAMADEVDNGSVD-SIFHIGDISYATGFLV--EWDFFLHQISP 398 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~-------~~~~~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~--~wd~f~~~l~~ 398 (638)
++|+..+|+|..-..... ....+.+....+..+++++++.+++ +++.+||+........ +.+...+.+..
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 478999999964321100 0112234466677777777666777 5556999985432111 11222333333
Q ss_pred hccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCC--------C------CCCCCeEEEEECCEEE--
Q 046241 399 VASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPI--------P------ARDKPWYSIEQAGVHF-- 462 (638)
Q Consensus 399 l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~--------~------~~~~~yYsfd~G~v~f-- 462 (638)
+ ... +.++||||+++.. .+ ...+.+....|. . ..-..|..++.+++++
T Consensus 81 ~--g~D-~~~lGNHefd~G~-~~------------l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgv 144 (281)
T cd07409 81 L--GYD-AMTLGNHEFDDGV-EG------------LAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGI 144 (281)
T ss_pred c--CCC-EEEeccccccCCH-HH------------HHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEE
Confidence 2 333 4567999997533 10 000001011110 0 0113466778888654
Q ss_pred EEEeCCCCC---C--C---cHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh-CCCeEEE
Q 046241 463 TVMSTEHDW---S--E---NSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD-NKVDLAL 533 (638)
Q Consensus 463 i~LDT~~~~---~--~---~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k-~~Vdlvl 533 (638)
+.+.+.... . . -.+..+.+++.+++....+...+|++.|..... + ..+.++ .+||+++
T Consensus 145 iG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~------d-------~~la~~~~giD~Ii 211 (281)
T cd07409 145 IGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV------D-------KEIARKVPGVDVIV 211 (281)
T ss_pred EEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh------H-------HHHHHcCCCCcEEE
Confidence 544442210 0 0 122345566666555434578899999987421 1 122333 4899999
Q ss_pred Eccccccc
Q 046241 534 FGHVHNYE 541 (638)
Q Consensus 534 sGH~H~Ye 541 (638)
.||.|...
T Consensus 212 ggH~H~~~ 219 (281)
T cd07409 212 GGHSHTFL 219 (281)
T ss_pred eCCcCccc
Confidence 99999965
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.7e-05 Score=81.59 Aligned_cols=200 Identities=16% Similarity=0.104 Sum_probs=91.6
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC-----CCccEEEEeCCcccCCCcHHHHH---HHHHhhhhhc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN-----GSVDSIFHIGDISYATGFLVEWD---FFLHQISPVA 400 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-----~~pDfvl~~GDi~y~~g~~~~wd---~f~~~l~~l~ 400 (638)
++++..+|+|..-.... ...+....+..+++++++ ...-+++.+||+.... ....+. ...+.+..+
T Consensus 1 ltIl~tnD~Hg~l~~~~----~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs-~~~~~~~g~~~~~~~n~~- 74 (285)
T cd07405 1 ITILHTNDHHGHFWPNG----TGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGV-PESDLQDAEPDFRGMNLV- 74 (285)
T ss_pred CEEEEEcccccccccCC----CCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCc-hhHHhcCcchHHHHHHhh-
Confidence 47899999997532210 112334445555555543 2335788899998332 222221 111222222
Q ss_pred cCcceEEecCCCccCCCCCCCCcccCCCCCCccchhcc--ccccCCCCCCCCCeEEEEECCEEEE--EEeCCCC---CCC
Q 046241 401 SRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYE--TYFPMPIPARDKPWYSIEQAGVHFT--VMSTEHD---WSE 473 (638)
Q Consensus 401 ~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~--~~f~~P~~~~~~~yYsfd~G~v~fi--~LDT~~~---~~~ 473 (638)
..- ..++||||+++.. .. ...... +...++. +.+.......-..|.-++.+++++- .+.+... ..+
T Consensus 75 -g~D-a~~~GNHEfD~G~-~~--L~~~~~--~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~ 147 (285)
T cd07405 75 -GYD-AMAVGNHEFDNPL-EV--LRQQMK--WANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNP 147 (285)
T ss_pred -CCc-EEeecccccccCH-HH--HHHHHh--hCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCc
Confidence 233 4467999997633 00 000000 0000000 0000000001234677788886654 4433211 000
Q ss_pred -------cHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 474 -------NSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 474 -------~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
-.+..+=+++.+++....+..-+|++.|-.................+...+...++|++|.||.|...
T Consensus 148 ~~~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 148 AYFEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHGSNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCcCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccccccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 01112222222222222367789999999875332111110111233333333589999999999965
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00013 Score=70.55 Aligned_cols=64 Identities=17% Similarity=0.184 Sum_probs=42.6
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
++++++||+|.... ......+.....++|+|+|+||.+... ....|... -..+++++
T Consensus 2 m~ilviSDtH~~~~--------------~~~~~~~~~~~~~~d~vih~GD~~~~~-~~~~l~~~--------~~~~i~~V 58 (172)
T COG0622 2 MKILVISDTHGPLR--------------AIEKALKIFNLEKVDAVIHAGDSTSPF-TLDALEGG--------LAAKLIAV 58 (172)
T ss_pred cEEEEEeccCCChh--------------hhhHHHHHhhhcCCCEEEECCCcCCcc-chHHhhcc--------cccceEEE
Confidence 78999999997531 122333333557999999999999543 22222111 14788999
Q ss_pred cCCCccC
Q 046241 409 IGNHERD 415 (638)
Q Consensus 409 ~GNHD~~ 415 (638)
.||.|..
T Consensus 59 ~GN~D~~ 65 (172)
T COG0622 59 RGNCDGE 65 (172)
T ss_pred EccCCCc
Confidence 9999973
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.9e-05 Score=77.09 Aligned_cols=177 Identities=15% Similarity=0.152 Sum_probs=90.7
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCC-CcHHHHHHHHHhhhhhccCcceEEe
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT-GFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~-g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
|++++||.=.. ||...+.+.|-+..++.++||++..||++-.. +... ...+.+..+ .+-+ ++
T Consensus 1 ~ilfigdi~g~-----------~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~---~~~~~L~~~--G~D~-iT 63 (255)
T cd07382 1 KILFIGDIVGK-----------PGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITP---KIAKELLSA--GVDV-IT 63 (255)
T ss_pred CEEEEEeCCCH-----------HHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCH---HHHHHHHhc--CCCE-EE
Confidence 58899996432 23333334443333457899999999998432 2221 222233322 3344 45
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCC--CCCCCcHHHHHHHHHHhc
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTE--HDWSENSEQYEWMKKDMA 486 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~--~~~~~~~~Q~~WL~~~La 486 (638)
.||||++... .+..-+... . .. .--+.|....+..|..++.+++++-+++-. ........-++-+++.++
T Consensus 64 lGNH~fD~ge----l~~~l~~~~--~-~l-~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~ 135 (255)
T cd07382 64 MGNHTWDKKE----ILDFIDEEP--R-LL-RPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLE 135 (255)
T ss_pred ecccccCcch----HHHHHhcCc--C-ce-EeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHH
Confidence 5999986431 100000000 0 00 001122222345678888888776555432 111111122344555555
Q ss_pred cccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 487 SVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 487 ~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
+.. .+.+.+||.+|--.. .+ ...+.. .-.-+||+++.||.|..--
T Consensus 136 ~lk-~~~D~IIV~~H~g~t--------sE-k~ala~-~ldg~VdvIvGtHTHv~t~ 180 (255)
T cd07382 136 ELK-EEADIIFVDFHAEAT--------SE-KIALGW-YLDGRVSAVVGTHTHVQTA 180 (255)
T ss_pred HHh-cCCCEEEEEECCCCC--------HH-HHHHHH-hCCCCceEEEeCCCCccCC
Confidence 543 257789999997431 11 112221 2233699999999998653
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.14 E-value=5e-06 Score=85.58 Aligned_cols=85 Identities=12% Similarity=0.185 Sum_probs=56.9
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcH-HHHHHHHHhhhhhcc-C-cce
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFL-VEWDFFLHQISPVAS-R-VSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~-~~wd~f~~~l~~l~~-~-vP~ 405 (638)
+||++++|+|.+....... ..+.....++++.+.+.+.++|+|+++||+.+..... .....+.+.++.+.. . +|+
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v 78 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPI 78 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceE
Confidence 5899999999875432111 1111245677888877788999999999999754322 223334444554432 3 899
Q ss_pred EEecCCCccC
Q 046241 406 MTAIGNHERD 415 (638)
Q Consensus 406 ~~v~GNHD~~ 415 (638)
++++||||..
T Consensus 79 ~~i~GNHD~~ 88 (253)
T TIGR00619 79 VVISGNHDSA 88 (253)
T ss_pred EEEccCCCCh
Confidence 9999999973
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.3e-06 Score=81.89 Aligned_cols=70 Identities=17% Similarity=0.221 Sum_probs=44.6
Q ss_pred EEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh--------CCCccEEEEeCCcccCCCcHHH-HHHHHHhhhh-hcc
Q 046241 332 LTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD--------NGSVDSIFHIGDISYATGFLVE-WDFFLHQISP-VAS 401 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~--------~~~pDfvl~~GDi~y~~g~~~~-wd~f~~~l~~-l~~ 401 (638)
+++||+|. ....++++++.+. ..+.|.++++||+++.+....+ .+.+.+..+. ...
T Consensus 1 ~vi~DIHG--------------~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~ 66 (208)
T cd07425 1 VAIGDLHG--------------DLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKA 66 (208)
T ss_pred CEEeCccC--------------CHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhc
Confidence 47899995 3466777776653 3478999999999965433322 2222222111 123
Q ss_pred CcceEEecCCCccC
Q 046241 402 RVSYMTAIGNHERD 415 (638)
Q Consensus 402 ~vP~~~v~GNHD~~ 415 (638)
..+++++.||||..
T Consensus 67 ~~~v~~l~GNHE~~ 80 (208)
T cd07425 67 GGKVHFLLGNHELM 80 (208)
T ss_pred CCeEEEeeCCCcHH
Confidence 56899999999963
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=4.1e-05 Score=94.75 Aligned_cols=193 Identities=19% Similarity=0.149 Sum_probs=96.3
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEE-eCCcccCCCcHHH---HHHHHHhhhhhccCc
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFH-IGDISYATGFLVE---WDFFLHQISPVASRV 403 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~-~GDi~y~~g~~~~---wd~f~~~l~~l~~~v 403 (638)
.++|+.++|+|..- . ....+..+++++++.+++.|++ +||++... .... +....+.+..+ -
T Consensus 660 ~l~Il~~nD~Hg~l-~----------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs-~~~~~~~g~~~~~~ln~l---g 724 (1163)
T PRK09419 660 ELTILHTNDFHGHL-D----------GAAKRVTKIKEVKEENPNTILVDAGDVYQGS-LYSNLLKGLPVLKMMKEM---G 724 (1163)
T ss_pred EEEEEEEeecccCC-C----------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCc-chhhhcCChHHHHHHhCc---C
Confidence 49999999999432 1 1344566666667778888766 99998543 2221 12333333332 2
Q ss_pred ceEEecCCCccCCCCCCCCcccCCCCC-Cccchhccc-cccC-------CCCC----CCCCeEEEEECCEE--EEEEeCC
Q 046241 404 SYMTAIGNHERDYLGSSGSVYESPDSG-GECGVAYET-YFPM-------PIPA----RDKPWYSIEQAGVH--FTVMSTE 468 (638)
Q Consensus 404 P~~~v~GNHD~~~~~~sgs~y~~~ds~-ge~~~~y~~-~f~~-------P~~~----~~~~yYsfd~G~v~--fi~LDT~ 468 (638)
.-+.++||||+++... .-.-.....+ .+....|.. .|++ ...+ .-..|.-++.++++ ||.+-+.
T Consensus 725 ~d~~~~GNHEfd~g~~-~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~ 803 (1163)
T PRK09419 725 YDASTFGNHEFDWGPD-VLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTP 803 (1163)
T ss_pred CCEEEecccccccChH-HHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEeccc
Confidence 2356999999965331 0000000000 000000100 0110 0000 01357777888855 5555443
Q ss_pred CC--C-CC-------cHHHHHHHHHHhcccc-CCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhC-CCeEEEEcc
Q 046241 469 HD--W-SE-------NSEQYEWMKKDMASVD-RSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN-KVDLALFGH 536 (638)
Q Consensus 469 ~~--~-~~-------~~~Q~~WL~~~La~~~-r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH 536 (638)
.- + .+ -.+..+.+++..++.. ..+...+|++.|.......... ......|.++. +||++|.||
T Consensus 804 ~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~~-----~~~~~~lA~~v~gIDvIigGH 878 (1163)
T PRK09419 804 ETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTTG-----EITGLELAKKVKGVDAIISAH 878 (1163)
T ss_pred ccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccccccc-----ccHHHHHHHhCCCCCEEEeCC
Confidence 10 0 00 1122333444433332 2467889999999875332111 11123344433 799999999
Q ss_pred ccccc
Q 046241 537 VHNYE 541 (638)
Q Consensus 537 ~H~Ye 541 (638)
.|..-
T Consensus 879 sH~~~ 883 (1163)
T PRK09419 879 THTLV 883 (1163)
T ss_pred CCccc
Confidence 99864
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00023 Score=73.56 Aligned_cols=177 Identities=15% Similarity=0.155 Sum_probs=97.7
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh-CCCccEEEEeCCcccCC-CcHHHHHHHHHhhhhhccCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD-NGSVDSIFHIGDISYAT-GFLVEWDFFLHQISPVASRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfvl~~GDi~y~~-g~~~~wd~f~~~l~~l~~~vP~~ 406 (638)
+|++++||.=.. || ...+...+.+++ +.++||++..||++-.. +...+ ..+.+.. ..+-++
T Consensus 1 m~ilfiGDi~G~-----------~G-r~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~---~~~~L~~--~GvDvi 63 (266)
T TIGR00282 1 IKFLFIGDVYGK-----------AG-RKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLK---IYEFLKQ--SGVNYI 63 (266)
T ss_pred CeEEEEEecCCH-----------HH-HHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHH---HHHHHHh--cCCCEE
Confidence 589999997522 12 344444444443 46799999999998432 22221 1222222 245555
Q ss_pred EecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCC--CCCC--cHHHHHHHH
Q 046241 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEH--DWSE--NSEQYEWMK 482 (638)
Q Consensus 407 ~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~--~~~~--~~~Q~~WL~ 482 (638)
+. |||+++... .+..-+. + ....+..+.|....+..|..++.++.++-+++-.. ...+ ...-++-++
T Consensus 64 T~-GNH~~Dkge----~~~~i~~--~--~~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d 134 (266)
T TIGR00282 64 TM-GNHTWFQKL----ILDVVIN--Q--KDLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLK 134 (266)
T ss_pred Ec-cchhccCcH----HHHHHhc--c--ccccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHH
Confidence 54 999986432 1100000 0 00111223343334556777888887776666421 1111 111233355
Q ss_pred HHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 483 KDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 483 ~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
+.+++.+ .+.+.+||.+|--. ...+.....+.+.+|++|+.-|.|..--
T Consensus 135 ~~i~~lk-~~~d~IIVd~Haea----------tsEK~a~~~~ldg~vsaVvGtHtHV~Ta 183 (266)
T TIGR00282 135 ELINMLK-KDCDLIFVDFHAET----------TSEKNAFGMAFDGYVTAVVGTHTHVPTA 183 (266)
T ss_pred HHHHhhh-cCCCEEEEEeCCCC----------HHHHHHHHHHhCCCccEEEeCCCCCCCC
Confidence 5555443 24678999999553 1124556677788999999999998653
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.2e-05 Score=82.38 Aligned_cols=127 Identities=13% Similarity=0.066 Sum_probs=75.7
Q ss_pred ccEEEEEEecCCCCCCCCCc--cc-ccCCChHHHHHHHHHH-hhCCCccEEEEeCCcccCCC--cHHHHHHHHHhhhhhc
Q 046241 327 EVLRFLTYGDMGKAPLDDSA--EH-YIQPGSLSVIKAMADE-VDNGSVDSIFHIGDISYATG--FLVEWDFFLHQISPVA 400 (638)
Q Consensus 327 ~~~rf~v~GD~g~~~~~~~~--~~-~~~pg~~~~~~~l~~~-i~~~~pDfvl~~GDi~y~~g--~~~~wd~f~~~l~~l~ 400 (638)
+.+|+++++|.|.-...... -+ ...-+..-.+++.... ....+||.++++||+.+.+. ..++|.+..+.++.+.
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf 126 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIF 126 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhh
Confidence 34999999999986533210 00 0000111112222222 23479999999999997542 2466765444455443
Q ss_pred ---cCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCC
Q 046241 401 ---SRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEH 469 (638)
Q Consensus 401 ---~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~ 469 (638)
..+|.+.++||||.++.. ....+....|+..|. .....|+.|+..|+++|++.
T Consensus 127 ~~k~~~~~~~i~GNhDIGf~~---------~~~~~~i~Rfe~~fg-------~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 127 GRKGNIKVIYIAGNHDIGFGN---------ELIPEWIDRFESVFG-------PTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred CCCCCCeeEEeCCcccccccc---------ccchhHHHHHHHhhc-------chhhhhccCCceeEEeeehh
Confidence 479999999999986433 000111234555553 13457899999999999875
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.00 E-value=2e-05 Score=76.02 Aligned_cols=78 Identities=17% Similarity=0.150 Sum_probs=44.4
Q ss_pred EEEecCCCCCCCCCc-ccccCCChHHHHHHHHHHhhC--CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 332 LTYGDMGKAPLDDSA-EHYIQPGSLSVIKAMADEVDN--GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~-~~~~~pg~~~~~~~l~~~i~~--~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
.+++|+|.+...... +....+......+++.+.+.+ .++|.|+++||++.... ...+ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEE
Confidence 478999987642110 000111122233445544433 37899999999996543 3222 2333332 3689999
Q ss_pred cCCCccC
Q 046241 409 IGNHERD 415 (638)
Q Consensus 409 ~GNHD~~ 415 (638)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999963
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.8e-05 Score=86.98 Aligned_cols=85 Identities=16% Similarity=0.191 Sum_probs=53.9
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHH-HHHHHHHhhhhhc-cCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLV-EWDFFLHQISPVA-SRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~-~wd~f~~~l~~l~-~~vP~~ 406 (638)
+||++++|+|.+........ .......++++.+.+.+.+||+||++||+.+...... ....+.+.+..+. ..+|++
T Consensus 1 mkilh~SDlHlG~~~~~~~~--~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~ 78 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSR--AAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLV 78 (407)
T ss_pred CEEEEEcccCCCCcccCccc--HHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEE
Confidence 58999999998743210000 0012344677777778899999999999996532221 1122333333333 258999
Q ss_pred EecCCCccC
Q 046241 407 TAIGNHERD 415 (638)
Q Consensus 407 ~v~GNHD~~ 415 (638)
+++||||..
T Consensus 79 ~I~GNHD~~ 87 (407)
T PRK10966 79 VLAGNHDSV 87 (407)
T ss_pred EEcCCCCCh
Confidence 999999963
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.6e-05 Score=85.42 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=55.7
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCC-cH-HHHHHHHH-hhhhhc-cCcc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATG-FL-VEWDFFLH-QISPVA-SRVS 404 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g-~~-~~wd~f~~-~l~~l~-~~vP 404 (638)
+||+++||+|.+..... ..........++++++.+.+.++|+||++||+.+... .. .......+ .++.+. ..+|
T Consensus 1 MKilhiSD~HLG~~~~~--~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD--PWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred CeEEEEeeecCCCcCCC--hhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 58999999998754211 0111113456778888888899999999999996542 21 22222222 233332 3799
Q ss_pred eEEecCCCccC
Q 046241 405 YMTAIGNHERD 415 (638)
Q Consensus 405 ~~~v~GNHD~~ 415 (638)
++.++||||..
T Consensus 79 v~~I~GNHD~~ 89 (340)
T PHA02546 79 LHVLVGNHDMY 89 (340)
T ss_pred EEEEccCCCcc
Confidence 99999999974
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00015 Score=82.92 Aligned_cols=201 Identities=16% Similarity=0.136 Sum_probs=90.7
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC-----CCccEEEEeCCcccCCCcHHHH---HHHHHhhhhh
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN-----GSVDSIFHIGDISYATGFLVEW---DFFLHQISPV 399 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-----~~pDfvl~~GDi~y~~g~~~~w---d~f~~~l~~l 399 (638)
.++|+.+.|+|..-.... ........+..+++++++ ...-++|.+||+.... ....+ ....+.+..+
T Consensus 34 ~ltil~tnD~Hg~~~~~~----~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g~~~i~~mN~~ 108 (551)
T PRK09558 34 KITILHTNDHHGHFWRNE----YGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFRGMNLI 108 (551)
T ss_pred EEEEEEecccCCCccccc----cCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCCchhHHHHhcC
Confidence 499999999997542210 011123334444444432 2335788899997432 22222 1112223222
Q ss_pred ccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhcc-ccccCCCCC--CCCCeEEEEECCEEE--EEEeCCCC--C-
Q 046241 400 ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYE-TYFPMPIPA--RDKPWYSIEQAGVHF--TVMSTEHD--W- 471 (638)
Q Consensus 400 ~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~-~~f~~P~~~--~~~~yYsfd~G~v~f--i~LDT~~~--~- 471 (638)
..- +.++||||+++.. . .+... -....-++. ........+ .-..|.-++.+++++ |.+-+... +
T Consensus 109 --g~D-a~tlGNHEFD~G~-~--~L~~~--~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 109 --GYD-AMAVGNHEFDNPL-S--VLRKQ--EKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred --CCC-EEcccccccCcCH-H--HHHHh--hccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 233 4567999997643 1 00000 000000000 000000000 113577778888654 55543321 0
Q ss_pred CC-------cHHHHHHHHHHhccccC-CCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 472 SE-------NSEQYEWMKKDMASVDR-SKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 472 ~~-------~~~Q~~WL~~~La~~~r-~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
.+ -....+-+++.+++... .+..-+|++.|..+...............+..-+...+||++|.||.|..-
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~~~~~~d~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHGSNAPGDVEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccCCCCccHHHHHHhCCccCceEEEeCCCCccc
Confidence 00 01112223333333221 367789999998885332111000000122222223379999999999854
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.4e-05 Score=78.19 Aligned_cols=74 Identities=19% Similarity=0.148 Sum_probs=44.4
Q ss_pred EEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHH----hhhhhc-cCcceE
Q 046241 332 LTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLH----QISPVA-SRVSYM 406 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~----~l~~l~-~~vP~~ 406 (638)
++++|.|.++.. |.....+-.+++... .+.|.++++||+++.---...|.++.+ .+..++ ..+|++
T Consensus 1 lFISDlHL~~~~--------p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 1 LFISDLHLGPKR--------PALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred CeeeccccCCCC--------cHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEE
Confidence 368999988532 222233333333322 356999999999954211123444333 333444 469999
Q ss_pred EecCCCcc
Q 046241 407 TAIGNHER 414 (638)
Q Consensus 407 ~v~GNHD~ 414 (638)
.++||||+
T Consensus 72 ~i~GN~Df 79 (237)
T COG2908 72 YIHGNHDF 79 (237)
T ss_pred EecCchHH
Confidence 99999996
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.90 E-value=9.4e-05 Score=84.04 Aligned_cols=201 Identities=18% Similarity=0.181 Sum_probs=101.1
Q ss_pred CccEEEEEEecCCCCCCCCCcccccC-CChHHHHHHHHHHhhCCC-ccEEEEeCCcccCCCcHHH---HHHHHHhhhhhc
Q 046241 326 SEVLRFLTYGDMGKAPLDDSAEHYIQ-PGSLSVIKAMADEVDNGS-VDSIFHIGDISYATGFLVE---WDFFLHQISPVA 400 (638)
Q Consensus 326 ~~~~rf~v~GD~g~~~~~~~~~~~~~-pg~~~~~~~l~~~i~~~~-pDfvl~~GDi~y~~g~~~~---wd~f~~~l~~l~ 400 (638)
...++|+...|+|..-.......... .+....+..+.+++++.. ..++|.+||+......... .....+.|..
T Consensus 24 ~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~-- 101 (517)
T COG0737 24 TVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNA-- 101 (517)
T ss_pred ceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhh--
Confidence 34599999999997654111110000 233445556666665544 4678899999954322211 1122223322
Q ss_pred cCcce-EEecCCCccCCCCCCCCcccCCCCCCccchhcc--ccccCCCC--CCCCCeEEEEECCEE--EEEEeCCC--CC
Q 046241 401 SRVSY-MTAIGNHERDYLGSSGSVYESPDSGGECGVAYE--TYFPMPIP--ARDKPWYSIEQAGVH--FTVMSTEH--DW 471 (638)
Q Consensus 401 ~~vP~-~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~--~~f~~P~~--~~~~~yYsfd~G~v~--fi~LDT~~--~~ 471 (638)
+++ ..++||||+++... ... +.-.+...++. +.+.-+.. ...+.|.-++.++++ +|.+.+.. .+
T Consensus 102 --m~yDa~tiGNHEFd~g~~---~l~--~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~ 174 (517)
T COG0737 102 --LGYDAMTLGNHEFDYGLE---ALA--RLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTW 174 (517)
T ss_pred --cCCcEEeecccccccCHH---HHH--HHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCccccc
Confidence 222 56899999975330 000 00000000000 00000011 112578889999855 45555321 11
Q ss_pred C--------CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHH-HHHHHHHHHHhCCCeEEEEcccccc
Q 046241 472 S--------ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNK-FVDAVEPLLLDNKVDLALFGHVHNY 540 (638)
Q Consensus 472 ~--------~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~-~r~~l~~Ll~k~~VdlvlsGH~H~Y 540 (638)
. .-....+++++.+.+...+...-+|++.|-+............ ...... .++|+++.||.|.+
T Consensus 175 ~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~~~~~~~-----~~iD~i~~GH~H~~ 247 (517)
T COG0737 175 EKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPGDVDVAV-----PGIDLIIGGHSHTV 247 (517)
T ss_pred ccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccccccccc-----cCcceEeccCCccc
Confidence 0 1124556667766665433477899999999865432211100 000000 34999999999964
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0003 Score=73.65 Aligned_cols=195 Identities=17% Similarity=0.227 Sum_probs=91.5
Q ss_pred EEEEEEecCCCCCCCCCcccccCCCh----HHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcH--H--HHHHHHHhhhhh
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGS----LSVIKAMADEVDNGSVD-SIFHIGDISYATGFL--V--EWDFFLHQISPV 399 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~----~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~--~--~wd~f~~~l~~l 399 (638)
++|+..+|+|..-....... ...+. ...++++.++.++.+++ ++|.+||........ . .+....+.+.
T Consensus 6 ltILhtnD~Hg~l~~~~~~~-~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN-- 82 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDP-NYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFR-- 82 (282)
T ss_pred EEEEEEcccccCCcCcCCcc-cccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHH--
Confidence 99999999996422110000 00111 22234443333344555 667899998532111 1 2222233333
Q ss_pred ccCcce-EEecCCCccCCCCCCCCc-cc--CCCCCC--cc-chhcccc--ccCCCCCCCCCeEEEEEC-CEE--EEEEeC
Q 046241 400 ASRVSY-MTAIGNHERDYLGSSGSV-YE--SPDSGG--EC-GVAYETY--FPMPIPARDKPWYSIEQA-GVH--FTVMST 467 (638)
Q Consensus 400 ~~~vP~-~~v~GNHD~~~~~~sgs~-y~--~~ds~g--e~-~~~y~~~--f~~P~~~~~~~yYsfd~G-~v~--fi~LDT 467 (638)
.+++ ..++||||+++.. .+-. +. .+...- -| ...+... ...| ....|..++.+ +++ ||.+-+
T Consensus 83 --~mgyDa~tlGNHEFd~g~-~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~---~~~~y~i~~~~~G~kIgiiGltt 156 (282)
T cd07407 83 --MMPYDLLTIGNHELYNYE-VADDEYEGFVPSWGDRYLTSNVDITDDSGLLVP---IGSRYRKFTTKHGLRVLAFGFLF 156 (282)
T ss_pred --hcCCcEEeecccccCccc-cHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccc---cccceEEEEcCCCcEEEEEEEec
Confidence 3344 5689999996422 1100 00 000000 00 0000000 0001 11346666776 655 555544
Q ss_pred CCC-------CCC--cHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhC-CCe-EEEEcc
Q 046241 468 EHD-------WSE--NSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN-KVD-LALFGH 536 (638)
Q Consensus 468 ~~~-------~~~--~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~-~Vd-lvlsGH 536 (638)
... +.. ...+.+|+.+.|++ .+...+|++.|....... ...+....+.++. ++| ++|.||
T Consensus 157 ~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~------~~~~~~~~la~~~~~id~~Ii~GH 227 (282)
T cd07407 157 DFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA------EFKVLHDAIRKIFPDTPIQFLGGH 227 (282)
T ss_pred ccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc------cHHHHHHHHHHhCCCCCEEEEeCC
Confidence 321 111 12233488777874 357789999998864321 1111122333444 567 799999
Q ss_pred ccccc
Q 046241 537 VHNYE 541 (638)
Q Consensus 537 ~H~Ye 541 (638)
.|...
T Consensus 228 sH~~~ 232 (282)
T cd07407 228 SHVRD 232 (282)
T ss_pred ccccc
Confidence 99753
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00024 Score=81.19 Aligned_cols=183 Identities=16% Similarity=0.158 Sum_probs=90.8
Q ss_pred EEEEEEecCCCCCCCCCc------c-cccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccCCCcHHHH---HHHHHhhh
Q 046241 329 LRFLTYGDMGKAPLDDSA------E-HYIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYATGFLVEW---DFFLHQIS 397 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~------~-~~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~~g~~~~w---d~f~~~l~ 397 (638)
++|+.+.|+|..-..... . .....+....+..+++++++..+ -++|.+||..... ....+ +...+.+.
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs-~~~~~~~g~~~i~~~N 79 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGT-LYFTLFGGRADAALMN 79 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCc-cchhhcCCHHHHHHHh
Confidence 478999999865221100 0 01122445666666776665444 4778999998432 11111 22222332
Q ss_pred hhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCC---------CC----CCCCCeEEEEECC--EEE
Q 046241 398 PVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMP---------IP----ARDKPWYSIEQAG--VHF 462 (638)
Q Consensus 398 ~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P---------~~----~~~~~yYsfd~G~--v~f 462 (638)
.+ --=+.++||||+++.. . . ...+.+....| .. ..-..|.-++.++ +-|
T Consensus 80 ~~---g~Da~~lGNHEFd~G~-~--~----------l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgi 143 (550)
T TIGR01530 80 AA---GFDFFTLGNHEFDAGN-E--G----------LKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAI 143 (550)
T ss_pred cc---CCCEEEeccccccCCH-H--H----------HHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEE
Confidence 22 1226689999997532 0 0 00010000011 00 0123577778888 556
Q ss_pred EEEeCCCC-C---CCc-----HHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh-CCCeEE
Q 046241 463 TVMSTEHD-W---SEN-----SEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD-NKVDLA 532 (638)
Q Consensus 463 i~LDT~~~-~---~~~-----~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k-~~Vdlv 532 (638)
|.|.+... . .++ ....+=+++..+.....+..-+|++.|..... + ..|.++ .+||++
T Consensus 144 iGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~------d-------~~la~~~~~iD~I 210 (550)
T TIGR01530 144 IGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFEK------N-------CEIAQKINDIDVI 210 (550)
T ss_pred EEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH------H-------HHHHhcCCCCCEE
Confidence 77754211 0 111 01112222222222224567899999976421 1 123333 389999
Q ss_pred EEccccccc
Q 046241 533 LFGHVHNYE 541 (638)
Q Consensus 533 lsGH~H~Ye 541 (638)
|.||.|.+-
T Consensus 211 igGHsH~~~ 219 (550)
T TIGR01530 211 VSGDSHYLL 219 (550)
T ss_pred EeCCCCccc
Confidence 999999965
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00042 Score=73.61 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=26.3
Q ss_pred CCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhC-CCeEEEEccccccc
Q 046241 491 SKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN-KVDLALFGHVHNYE 541 (638)
Q Consensus 491 ~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~Ye 541 (638)
++..-+|++.|-.-+. .+ ..|.++. +||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~~~-----~d-------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS-----IE-------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc-----hH-------HHHHhcCCCCCEEEeCCCCccC
Confidence 4567899999974211 11 1234443 89999999999865
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00017 Score=68.18 Aligned_cols=56 Identities=13% Similarity=0.161 Sum_probs=36.0
Q ss_pred HHHHHHHH-HhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEecCCCc
Q 046241 356 SVIKAMAD-EVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHE 413 (638)
Q Consensus 356 ~~~~~l~~-~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD 413 (638)
.+++++.+ .-++.++|++|.+||+.-.+....+|..+..- .....+|.|++-||||
T Consensus 12 ~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 12 ALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred HHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 44455544 22457899999999998554433344444432 2235789999999985
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.63 E-value=7.4e-05 Score=72.25 Aligned_cols=83 Identities=14% Similarity=0.235 Sum_probs=52.0
Q ss_pred EEEecCCCCCCCCCcc-cccCCC--hHHHHHHHHHHhhCCCccEEEEeCCcccCCCc--HHHHHHHHHhhhhhccCcceE
Q 046241 332 LTYGDMGKAPLDDSAE-HYIQPG--SLSVIKAMADEVDNGSVDSIFHIGDISYATGF--LVEWDFFLHQISPVASRVSYM 406 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~-~~~~pg--~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~--~~~wd~f~~~l~~l~~~vP~~ 406 (638)
++++|+|.+....... ...-|. ....++++.+.+++.+||.|+++||+.+.... ..++... .........+|++
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~-~~~~~~~~~~~v~ 79 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEV-AFLRLLAKDVDVI 79 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHH-HHHHhccCCCeEE
Confidence 4789999875321000 111111 23677888888888999999999999965432 1222222 1233334678999
Q ss_pred EecCCCccC
Q 046241 407 TAIGNHERD 415 (638)
Q Consensus 407 ~v~GNHD~~ 415 (638)
.++||||..
T Consensus 80 ~i~GNHD~~ 88 (172)
T cd07391 80 LIRGNHDGG 88 (172)
T ss_pred EEcccCccc
Confidence 999999963
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0011 Score=78.30 Aligned_cols=64 Identities=16% Similarity=0.202 Sum_probs=36.2
Q ss_pred CCCCCCCCccEEEEEEecCCCCCCCCC--cccccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccC
Q 046241 319 TPPAGGSSEVLRFLTYGDMGKAPLDDS--AEHYIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYA 382 (638)
Q Consensus 319 T~p~~~~~~~~rf~v~GD~g~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~ 382 (638)
+.|..+..-.++|+...|+|..-..-. .......+....+..+++++++.++ -++|..||++..
T Consensus 106 ~~~~~~~~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQG 172 (814)
T PRK11907 106 SKPVEGQTVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQG 172 (814)
T ss_pred CCCccCCceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCC
Confidence 334444434599999999997632110 0000112234455566666655444 478889999853
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00026 Score=71.58 Aligned_cols=84 Identities=15% Similarity=0.130 Sum_probs=57.0
Q ss_pred EEEEEEecCCCCCCCCCcc-cc-cCC-ChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcce
Q 046241 329 LRFLTYGDMGKAPLDDSAE-HY-IQP-GSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~-~~-~~p-g~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~ 405 (638)
-+.++++|+|.+....... .. ..+ ...++++++.+.+++.+||.++++||+.++......|+.+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 4678999999874321100 01 111 22457778888777889999999999997654435566555555543 3589
Q ss_pred EEecCCCcc
Q 046241 406 MTAIGNHER 414 (638)
Q Consensus 406 ~~v~GNHD~ 414 (638)
+.++||||.
T Consensus 93 ~~V~GNHD~ 101 (225)
T TIGR00024 93 ILIRGNHDA 101 (225)
T ss_pred EEECCCCCC
Confidence 999999995
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00037 Score=71.22 Aligned_cols=75 Identities=15% Similarity=0.167 Sum_probs=49.7
Q ss_pred EEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC-----CccEEEEeCCcccCCC----c---------HHHHHHHH
Q 046241 332 LTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG-----SVDSIFHIGDISYATG----F---------LVEWDFFL 393 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-----~pDfvl~~GDi~y~~g----~---------~~~wd~f~ 393 (638)
++++|+|.+.... ....++.+.+.+... ++|.|+++||++.... . ...++.+.
T Consensus 2 ~~iSDlHl~~~~~---------~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (243)
T cd07386 2 VFISDVHVGSKTF---------LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAA 72 (243)
T ss_pred EEecccCCCchhh---------hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHH
Confidence 6899999754211 122334555544333 5799999999996521 0 12345566
Q ss_pred HhhhhhccCcceEEecCCCccC
Q 046241 394 HQISPVASRVSYMTAIGNHERD 415 (638)
Q Consensus 394 ~~l~~l~~~vP~~~v~GNHD~~ 415 (638)
+.++.+...+|+++++||||..
T Consensus 73 ~~l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 73 EYLSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHHHhcccCCeEEEeCCCCCcc
Confidence 6777777789999999999973
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00047 Score=77.91 Aligned_cols=80 Identities=13% Similarity=0.195 Sum_probs=54.8
Q ss_pred ccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh---------CCCccEEEEeCCcccCCCc------------
Q 046241 327 EVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD---------NGSVDSIFHIGDISYATGF------------ 385 (638)
Q Consensus 327 ~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~---------~~~pDfvl~~GDi~y~~g~------------ 385 (638)
+..++++++|+|.+.... ....++.+++.+. +.++|.++++||++...+.
T Consensus 242 ~~~~i~~ISDlHlgs~~~---------~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEF---------LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcch---------hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchh
Confidence 348999999999765321 1233445555554 5689999999999964221
Q ss_pred -HHHHHHHHHhhhhhccCcceEEecCCCccC
Q 046241 386 -LVEWDFFLHQISPVASRVSYMTAIGNHERD 415 (638)
Q Consensus 386 -~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~ 415 (638)
..+++.+.+.++.+...+|+++++||||..
T Consensus 313 ~~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 313 IYEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred hHHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 122345556666776789999999999973
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00039 Score=70.83 Aligned_cols=68 Identities=16% Similarity=0.341 Sum_probs=44.3
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC--CccEEEEeCCcccCCCcHHH--HHHHHHhhhhhccCcc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG--SVDSIFHIGDISYATGFLVE--WDFFLHQISPVASRVS 404 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfvl~~GDi~y~~g~~~~--wd~f~~~l~~l~~~vP 404 (638)
++++++||+|.. ...++++++.+... ..|.++++||+++. |.... .+.+++. +....+
T Consensus 1 m~~~~IsDIHG~--------------~~~l~~ll~~i~~~~~~~d~li~lGD~iDr-G~~s~~v~~~l~~~---~~~~~~ 62 (235)
T PHA02239 1 MAIYVVPDIHGE--------------YQKLLTIMDKINNERKPEETIVFLGDYVDR-GKRSKDVVNYIFDL---MSNDDN 62 (235)
T ss_pred CeEEEEECCCCC--------------HHHHHHHHHHHhhcCCCCCEEEEecCcCCC-CCChHHHHHHHHHH---hhcCCC
Confidence 478999999942 23456666666432 35999999999964 33221 2222222 223457
Q ss_pred eEEecCCCcc
Q 046241 405 YMTAIGNHER 414 (638)
Q Consensus 405 ~~~v~GNHD~ 414 (638)
+++++||||.
T Consensus 63 ~~~l~GNHE~ 72 (235)
T PHA02239 63 VVTLLGNHDD 72 (235)
T ss_pred eEEEECCcHH
Confidence 8999999996
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0028 Score=78.77 Aligned_cols=193 Identities=17% Similarity=0.251 Sum_probs=94.0
Q ss_pred cEEEEEEecCCCCCCCC--CcccccCCChHHHHHHHHHHhhCCCccEEE-EeCCcccCCCcHHHH------------HHH
Q 046241 328 VLRFLTYGDMGKAPLDD--SAEHYIQPGSLSVIKAMADEVDNGSVDSIF-HIGDISYATGFLVEW------------DFF 392 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~--~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl-~~GDi~y~~g~~~~w------------d~f 392 (638)
.++|+..+|+|..-..- ........+....+..+++++++.+++.++ ..||++.... ...| ...
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~-l~~~~~~~~~~~~~~~~~~ 119 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNP-LGEYAVKDNILFKNKTHPM 119 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCh-hhhHHhhhccccCCCcCHH
Confidence 39999999999753211 000011223456667777777766676555 5999995431 1111 111
Q ss_pred HHhhhhhccCcce-EEecCCCccCCCCCCCCcccCCCCCCccchhccccccCC--------CCCC--CCCeEEEEE----
Q 046241 393 LHQISPVASRVSY-MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMP--------IPAR--DKPWYSIEQ---- 457 (638)
Q Consensus 393 ~~~l~~l~~~vP~-~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P--------~~~~--~~~yYsfd~---- 457 (638)
.+.|.. +.+ ..++||||+++... .. ....+....| ..+. -..|--.+.
T Consensus 120 i~~mN~----lgyDa~~lGNHEFd~G~~---~L----------~~~~~~a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~ 182 (1163)
T PRK09419 120 IKAMNA----LGYDAGTLGNHEFNYGLD---FL----------DGTIKGANFPVLNANVKYKNGKNVYTPYKIKEKTVTD 182 (1163)
T ss_pred HHHHhh----cCccEEeecccccccCHH---HH----------HHHHhcCCCCEEEeeeecCCCCcccCCEEEEEEEeec
Confidence 122221 222 56799999975320 00 0000000011 0000 124555555
Q ss_pred -----CCEE--EEEEeCCC--CCC----Cc----HHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHH
Q 046241 458 -----AGVH--FTVMSTEH--DWS----EN----SEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAV 520 (638)
Q Consensus 458 -----G~v~--fi~LDT~~--~~~----~~----~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l 520 (638)
++++ ||.+-+.. .|. .+ ..-.+=+++.+++..+.+...+|++.|...-........+ ...
T Consensus 183 ~~g~~~gvkIgiiG~~~p~~~~~~~~~~~g~~~~~d~v~~~~~~v~~lk~~gaDvII~l~H~G~~~~~~~~~~e---n~~ 259 (1163)
T PRK09419 183 ENGKKQGVKVGYIGFVPPQIMTWDKKNLKGKVEVKNIVEEANKTIPEMKKGGADVIVALAHSGIESEYQSSGAE---DSV 259 (1163)
T ss_pred cCCCCCCeEEEEEecCCcchhhcchhhccCcEEECCHHHHHHHHHHHHHhcCCCEEEEEeccCcCCCCCCCCcc---hHH
Confidence 5555 45443321 111 01 1112223333333322467889999998875432211111 122
Q ss_pred HHHHHh-CCCeEEEEccccccc
Q 046241 521 EPLLLD-NKVDLALFGHVHNYE 541 (638)
Q Consensus 521 ~~Ll~k-~~VdlvlsGH~H~Ye 541 (638)
..|.++ -+||+++.||.|..-
T Consensus 260 ~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 260 YDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred HHHHHhCCCCcEEEeCCCcccc
Confidence 344444 489999999999975
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0064 Score=71.84 Aligned_cols=55 Identities=15% Similarity=0.143 Sum_probs=32.6
Q ss_pred cEEEEEEecCCCCCCCC--CcccccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccC
Q 046241 328 VLRFLTYGDMGKAPLDD--SAEHYIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYA 382 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~--~~~~~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~ 382 (638)
.++|+...|+|..-..- ........+....+..+++++++.++ -++|..||++..
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 39999999999763211 00000112234455666666655444 478889999843
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00088 Score=69.80 Aligned_cols=67 Identities=18% Similarity=0.309 Sum_probs=45.6
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh-CCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD-NGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
++++++||+|. ....++++++.+. +.+.|.++++||+++.+ ..+ .+..+.+..+ ..++.+
T Consensus 1 M~~~vIGDIHG--------------~~~~l~~ll~~~~~~~~~D~li~lGDlVdrG-p~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 1 MATYAIGDIQG--------------CYDELQRLLEKIDFDPAKDTLWLVGDLVNRG-PDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred CcEEEEEccCC--------------CHHHHHHHHHhcCCCCCCCEEEEeCCccCCC-cCH--HHHHHHHHhc--CCCeEE
Confidence 46899999994 3456677777664 34789999999999643 322 1223333332 346889
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 62 VlGNHD~ 68 (275)
T PRK00166 62 VLGNHDL 68 (275)
T ss_pred EecChhH
Confidence 9999996
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0012 Score=65.92 Aligned_cols=64 Identities=22% Similarity=0.276 Sum_probs=43.8
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC-CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN-GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
|++++||+|.. ...++++++.+.. .++|.++++||+++.+.... +.++.+. ..+++.+
T Consensus 2 ri~~isDiHg~--------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~---~~~~~l~----~~~~~~v 60 (207)
T cd07424 2 RDFVVGDIHGH--------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPESL---ACLELLL----EPWFHAV 60 (207)
T ss_pred CEEEEECCCCC--------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHH---HHHHHHh----cCCEEEe
Confidence 68999999942 3456667666543 46899999999996543321 2233332 2468899
Q ss_pred cCCCcc
Q 046241 409 IGNHER 414 (638)
Q Consensus 409 ~GNHD~ 414 (638)
.||||.
T Consensus 61 ~GNhe~ 66 (207)
T cd07424 61 RGNHEQ 66 (207)
T ss_pred ECCChH
Confidence 999996
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0063 Score=70.67 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=31.2
Q ss_pred EEEEEEecCCCCCCCCC--cccccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccC
Q 046241 329 LRFLTYGDMGKAPLDDS--AEHYIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYA 382 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~ 382 (638)
++++...|+|..-..-. .......+....+..+++++++..+ -++|..||++..
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qG 59 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQG 59 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCC
Confidence 89999999997632210 0000111234555566666654433 477889999853
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.013 Score=60.36 Aligned_cols=170 Identities=15% Similarity=0.188 Sum_probs=94.5
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh-----------CCCccEEEEeCCcccCCCc--------------
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD-----------NGSVDSIFHIGDISYATGF-------------- 385 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----------~~~pDfvl~~GDi~y~~g~-------------- 385 (638)
+++++|+|.+.... ....++.+.+.+. ..++.-+|++||.+...+.
T Consensus 2 i~~vSgL~ig~~~~---------~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~ 72 (257)
T cd07387 2 IALVSGLGLGGNAE---------SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKK 72 (257)
T ss_pred EEEEcccccCCCcc---------chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccc
Confidence 68899999876421 1122333333332 2345579999999964321
Q ss_pred -----HHHHHHHHHhhhhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhcc-ccccCCC-----CCCCCCeEE
Q 046241 386 -----LVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYE-TYFPMPI-----PARDKPWYS 454 (638)
Q Consensus 386 -----~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~-~~f~~P~-----~~~~~~yYs 454 (638)
..+.+++-+.+..+.+.+|+.+.|||||-.... .| +.++. ..|+.-. ..-.++ |.
T Consensus 73 ~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~-------lP------Qqplh~~lfp~s~~~~~~~~vtNP-~~ 138 (257)
T cd07387 73 SSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHS-------LP------QQPLHRCLFPKSSNYSTLNLVTNP-YE 138 (257)
T ss_pred cchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCccccc-------CC------CCCCCHHHhhcccccCCcEEeCCC-eE
Confidence 223445555666777899999999999963211 11 11111 1111000 001233 46
Q ss_pred EEECCEEEEEEeCCC-----CCCCcHHHHHHHHHHhccccCCCCCeEEEEeccCC-ccCCC-----CCCCHHHHHHHHHH
Q 046241 455 IEQAGVHFTVMSTEH-----DWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPM-YSSLS-----SSVDNKFVDAVEPL 523 (638)
Q Consensus 455 fd~G~v~fi~LDT~~-----~~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~-yss~~-----~~~~~~~r~~l~~L 523 (638)
|++++++|++.+... .+...+.-.+.|+..|+- | |--+ +.... ...| ++
T Consensus 139 ~~i~g~~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w--r----------HlaPTaPDTL~~yP~~~~D--------pf 198 (257)
T cd07387 139 FSIDGVRVLGTSGQNVDDILKYSSLESRLDILERTLKW--R----------HIAPTAPDTLWCYPFTDRD--------PF 198 (257)
T ss_pred EEECCEEEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh--c----------ccCCCCCCccccccCCCCC--------ce
Confidence 999999999887753 123344456778887763 1 2222 11110 0111 22
Q ss_pred HHhCCCeEEEEcccccccee
Q 046241 524 LLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 524 l~k~~VdlvlsGH~H~YeRt 543 (638)
+-+.-.+++++||.|.|+..
T Consensus 199 vi~~~PhVyf~Gnq~~f~t~ 218 (257)
T cd07387 199 ILEECPHVYFAGNQPKFGTK 218 (257)
T ss_pred eecCCCCEEEeCCCcceeee
Confidence 22344889999999999863
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0014 Score=66.77 Aligned_cols=68 Identities=13% Similarity=0.174 Sum_probs=44.6
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC----------CCccEEEEeCCcccCCCcHHHHHHHHHhhhhh
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN----------GSVDSIFHIGDISYATGFLVEWDFFLHQISPV 399 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~----------~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l 399 (638)
|++++||+|. ....++++++.+.- .+.|.++++||+++.+... .+..+.+..+
T Consensus 2 ~i~vigDIHG--------------~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s---~evl~~l~~l 64 (234)
T cd07423 2 PFDIIGDVHG--------------CYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDS---PEVLRLVMSM 64 (234)
T ss_pred CeEEEEECCC--------------CHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCH---HHHHHHHHHH
Confidence 7899999995 34567777777621 1368999999999643222 1223333333
Q ss_pred ccCcceEEecCCCcc
Q 046241 400 ASRVSYMTAIGNHER 414 (638)
Q Consensus 400 ~~~vP~~~v~GNHD~ 414 (638)
...-.+..+.||||.
T Consensus 65 ~~~~~~~~v~GNHE~ 79 (234)
T cd07423 65 VAAGAALCVPGNHDN 79 (234)
T ss_pred hhCCcEEEEECCcHH
Confidence 223457899999996
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.011 Score=68.86 Aligned_cols=84 Identities=17% Similarity=0.262 Sum_probs=45.5
Q ss_pred cEEEEEEecCCCCCCCCC--cccccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccCCCcHHHHHH-----------HH
Q 046241 328 VLRFLTYGDMGKAPLDDS--AEHYIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYATGFLVEWDF-----------FL 393 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~~g~~~~wd~-----------f~ 393 (638)
.++|+...|+|..-..-. .......+....+..+++++++..+ -++|..||++... ....|.. ..
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGs-p~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGS-PLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCc-hhhhhhhhccccCCCcchHH
Confidence 499999999997532110 0000111234555666666655444 4778899998532 2222211 12
Q ss_pred HhhhhhccCcce-EEecCCCccCC
Q 046241 394 HQISPVASRVSY-MTAIGNHERDY 416 (638)
Q Consensus 394 ~~l~~l~~~vP~-~~v~GNHD~~~ 416 (638)
+.|.. +.| ..++||||+++
T Consensus 104 ~amN~----lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 104 KAMNT----LDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHh----cCCcEEeccchhhhc
Confidence 22222 222 56899999975
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0018 Score=66.32 Aligned_cols=69 Identities=13% Similarity=0.233 Sum_probs=44.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC---------CCccEEEEeCCcccCCCcHHHHHHHHHhhhhh
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN---------GSVDSIFHIGDISYATGFLVEWDFFLHQISPV 399 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~---------~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l 399 (638)
+|++++||+|. ....+.++++.+.- ..-|.++++||+++. |..+. +.++.+..+
T Consensus 1 ~~~~vIGDIHG--------------~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDR-Gp~S~--~vl~~~~~~ 63 (245)
T PRK13625 1 MKYDIIGDIHG--------------CYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDR-GPHSL--RMIEIVWEL 63 (245)
T ss_pred CceEEEEECcc--------------CHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCC-CcChH--HHHHHHHHH
Confidence 36899999994 34566777766532 134789999999964 43221 122222222
Q ss_pred ccCcceEEecCCCcc
Q 046241 400 ASRVSYMTAIGNHER 414 (638)
Q Consensus 400 ~~~vP~~~v~GNHD~ 414 (638)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 234578999999995
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0022 Score=64.58 Aligned_cols=65 Identities=15% Similarity=0.263 Sum_probs=44.3
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh-CCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD-NGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
=|++++||+|.. ...++++.+.+. ..+.|.++++||+++.+....+ .++.+. ...+..
T Consensus 15 ~ri~visDiHg~--------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~---~l~~l~----~~~~~~ 73 (218)
T PRK09968 15 RHIWVVGDIHGE--------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLN---VLRLLN----QPWFIS 73 (218)
T ss_pred CeEEEEEeccCC--------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHH---HHHHHh----hCCcEE
Confidence 389999999953 456677777665 4578999999999964433221 222222 124678
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 74 v~GNHE~ 80 (218)
T PRK09968 74 VKGNHEA 80 (218)
T ss_pred EECchHH
Confidence 9999996
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.018 Score=58.55 Aligned_cols=88 Identities=20% Similarity=0.151 Sum_probs=50.0
Q ss_pred CeEEEEECCE--EEEEEeCCCCCC----------CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHH
Q 046241 451 PWYSIEQAGV--HFTVMSTEHDWS----------ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVD 518 (638)
Q Consensus 451 ~yYsfd~G~v--~fi~LDT~~~~~----------~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~ 518 (638)
.+..++.+++ .|+.+.+..... ....-.+-+++.++++. ++...+||+.|-..-... ... ....
T Consensus 122 ~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~--~p~-~~~~ 197 (239)
T cd07381 122 RPAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAK-KKADIVIVSLHWGVEYSY--YPT-PEQR 197 (239)
T ss_pred CcEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHh-hcCCEEEEEecCcccCCC--CCC-HHHH
Confidence 4556778874 455555432110 01111234555555543 247899999997552211 111 2233
Q ss_pred HHHHHHHhCCCeEEEEccccccce
Q 046241 519 AVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 519 ~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
.+...+.+.++|+++.||.|..+-
T Consensus 198 ~la~~l~~~G~D~IiG~H~Hv~q~ 221 (239)
T cd07381 198 ELARALIDAGADLVIGHHPHVLQG 221 (239)
T ss_pred HHHHHHHHCCCCEEEcCCCCcCCC
Confidence 455555567999999999998763
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0074 Score=63.38 Aligned_cols=171 Identities=22% Similarity=0.282 Sum_probs=94.7
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHH--HHhhCCCccEEEEeCCcccCCC--------cHHHH---HHHHHh
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMA--DEVDNGSVDSIFHIGDISYATG--------FLVEW---DFFLHQ 395 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~--~~i~~~~pDfvl~~GDi~y~~g--------~~~~w---d~f~~~ 395 (638)
+|+++-|++|..- .++.+.+. +.....++|++|+.||+---+. ....| ..|++.
T Consensus 1 MrIaVqGCcHG~L-------------d~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~Y 67 (456)
T KOG2863|consen 1 MRIAVQGCCHGEL-------------DNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKY 67 (456)
T ss_pred CceeeecccchhH-------------HHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHH
Confidence 5789999998531 12222222 2222358999999999952221 11223 234443
Q ss_pred hh-hhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCC--CCCCeE-----EEEECCEEEEEEeC
Q 046241 396 IS-PVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPA--RDKPWY-----SIEQAGVHFTVMST 467 (638)
Q Consensus 396 l~-~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~--~~~~yY-----sfd~G~v~fi~LDT 467 (638)
.. .+.+.+|.+++=||||... |.. .+|..+ ..+.|| ...+|++|+-.|+.
T Consensus 68 Ysge~~APVlTIFIGGNHEAsn--------------------yL~--eLpyGGwVApNIyYlG~agVv~~~gvRIggiSG 125 (456)
T KOG2863|consen 68 YSGEIKAPVLTIFIGGNHEASN--------------------YLQ--ELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISG 125 (456)
T ss_pred hCCcccCceeEEEecCchHHHH--------------------HHH--hcccCceeccceEEeeecceEEECCEEEeeccc
Confidence 32 3446788999999999621 111 111111 012333 46789999988875
Q ss_pred ---CCCCCC-----------------cHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHH-------H----
Q 046241 468 ---EHDWSE-----------------NSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNK-------F---- 516 (638)
Q Consensus 468 ---~~~~~~-----------------~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~-------~---- 516 (638)
++++.. .-.+++ ...|.+. +.|-=|++.|.-+-....++.... +
T Consensus 126 I~k~~dy~kgh~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqei 200 (456)
T KOG2863|consen 126 IYKEHDYRKGHFEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEI 200 (456)
T ss_pred hhhhhhcccCCCCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHH
Confidence 233221 011111 1223332 345558888976644332222111 1
Q ss_pred ------HHHHHHHHHhCCCeEEEEccccc
Q 046241 517 ------VDAVEPLLLDNKVDLALFGHVHN 539 (638)
Q Consensus 517 ------r~~l~~Ll~k~~VdlvlsGH~H~ 539 (638)
...++.||++.+...+|+.|.|.
T Consensus 201 e~~~LGSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 201 EEGKLGSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred hcCCcCChHHHHHHHHhCcchhhhhhHhh
Confidence 34667899999999999999997
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0034 Score=65.42 Aligned_cols=71 Identities=14% Similarity=0.111 Sum_probs=42.3
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC------CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCc
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN------GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRV 403 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~------~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~v 403 (638)
+++++||+|.. ...++++.+.+.. ...+.++++||+++.+....+--.++..+.......
T Consensus 3 ~iyaIGDIHG~--------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~ 68 (304)
T cd07421 3 VVICVGDIHGY--------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQ 68 (304)
T ss_pred eEEEEEeccCC--------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhccccc
Confidence 68999999953 4556666555432 235789999999965433322222222222111122
Q ss_pred ceEEecCCCcc
Q 046241 404 SYMTAIGNHER 414 (638)
Q Consensus 404 P~~~v~GNHD~ 414 (638)
.++++.||||.
T Consensus 69 ~vv~LrGNHE~ 79 (304)
T cd07421 69 RHVFLCGNHDF 79 (304)
T ss_pred ceEEEecCChH
Confidence 47889999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0027 Score=64.08 Aligned_cols=67 Identities=13% Similarity=0.205 Sum_probs=43.1
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC--------CccEEEEeCCcccCCCcHHHHHHHHHhhhhhccC
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG--------SVDSIFHIGDISYATGFLVEWDFFLHQISPVASR 402 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--------~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~ 402 (638)
+.++||+|. ....++++++.+... ..|.++++||+++.+.... +.++.+..+...
T Consensus 1 ~~vIGDIHG--------------~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~---~vl~~l~~l~~~ 63 (222)
T cd07413 1 YDFIGDIHG--------------HAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR---ELLEIVKSMVDA 63 (222)
T ss_pred CEEEEeccC--------------CHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH---HHHHHHHHhhcC
Confidence 368999995 356677777776422 4689999999996543222 122333333223
Q ss_pred cceEEecCCCcc
Q 046241 403 VSYMTAIGNHER 414 (638)
Q Consensus 403 vP~~~v~GNHD~ 414 (638)
-.++.+.||||.
T Consensus 64 ~~~~~l~GNHE~ 75 (222)
T cd07413 64 GHALAVMGNHEF 75 (222)
T ss_pred CCEEEEEccCcH
Confidence 368889999996
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0027 Score=63.90 Aligned_cols=65 Identities=15% Similarity=0.151 Sum_probs=44.6
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC-CccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG-SVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
-|++++||+|. ....++++++.+... +.|-++++||+++.+....+ ..+.+. ...+..
T Consensus 17 ~ri~vigDIHG--------------~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~---vl~~l~----~~~~~~ 75 (218)
T PRK11439 17 RHIWLVGDIHG--------------CFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLR---CLQLLE----EHWVRA 75 (218)
T ss_pred CeEEEEEcccC--------------CHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHH---HHHHHH----cCCceE
Confidence 48999999995 356677788777543 68999999999965432221 222222 124678
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 76 v~GNHE~ 82 (218)
T PRK11439 76 VRGNHEQ 82 (218)
T ss_pred eeCchHH
Confidence 9999995
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.17 Score=51.16 Aligned_cols=180 Identities=17% Similarity=0.165 Sum_probs=101.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+|++++||+=.. ||...+.+.|-....+.++||+|..|-++ +.|..--|+.+.++++. .+- +++
T Consensus 1 mriLfiGDvvGk-----------~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~d-viT 64 (266)
T COG1692 1 MRILFIGDVVGK-----------PGRKAVKEHLPQLKSKYKIDFVIVNGENA-AGGFGITEKIYKELLEA---GAD-VIT 64 (266)
T ss_pred CeEEEEecccCc-----------chHHHHHHHhHHHHHhhcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCC-EEe
Confidence 589999997532 33334444444434557899999999998 56665556666555542 333 457
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCC--CCCCC-cHHHHHHHHHHh
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTE--HDWSE-NSEQYEWMKKDM 485 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~--~~~~~-~~~Q~~WL~~~L 485 (638)
.|||=++-.. .+..-+. .....+-.+.|....+..|+-|+..+..+.+++-. ..... ...-++-+++.|
T Consensus 65 ~GNH~wd~~e----i~~~i~~----~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~ 136 (266)
T COG1692 65 LGNHTWDQKE----ILDFIDN----ADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLL 136 (266)
T ss_pred cccccccchH----HHHHhhc----ccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHH
Confidence 9999874322 1100000 00111222334444466688888877666666542 21111 222344456666
Q ss_pred ccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEcccccccee
Q 046241 486 ASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 486 a~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
...+ .+++.+||-+|.--.+.. .-.-++-+-.|.+|+-=|+|....-
T Consensus 137 ~~~~-~~~~~iiVDFHAEtTSEK----------~a~g~yldGrvsavvGTHTHV~TaD 183 (266)
T COG1692 137 DEIK-LGTDLIIVDFHAETTSEK----------NAFGWYLDGRVSAVVGTHTHVPTAD 183 (266)
T ss_pred HhCc-cCCceEEEEccccchhhh----------hhhheEEcCeEEEEEeccCcccccc
Confidence 6543 456788998995432211 1112234557899999999986543
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0034 Score=62.93 Aligned_cols=67 Identities=15% Similarity=0.143 Sum_probs=43.9
Q ss_pred EEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhcc-CcceEEecC
Q 046241 332 LTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVAS-RVSYMTAIG 410 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~-~vP~~~v~G 410 (638)
.++||+|.. ...+.++++.+.....|.++++||+++.. ... .+..+.+..+.. ..+++.+.|
T Consensus 1 ~~igDiHg~--------------~~~l~~~l~~~~~~~~d~li~lGD~vdrg-~~~--~~~l~~l~~~~~~~~~~~~l~G 63 (225)
T cd00144 1 YVIGDIHGC--------------LDDLLRLLEKIGFPPNDKLIFLGDYVDRG-PDS--VEVIDLLLALKILPDNVILLRG 63 (225)
T ss_pred CEEeCCCCC--------------HHHHHHHHHHhCCCCCCEEEEECCEeCCC-CCc--HHHHHHHHHhcCCCCcEEEEcc
Confidence 378999942 35566777777667899999999999653 221 122222222211 457899999
Q ss_pred CCccC
Q 046241 411 NHERD 415 (638)
Q Consensus 411 NHD~~ 415 (638)
|||..
T Consensus 64 NHe~~ 68 (225)
T cd00144 64 NHEDM 68 (225)
T ss_pred Cchhh
Confidence 99974
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.046 Score=60.07 Aligned_cols=80 Identities=14% Similarity=0.211 Sum_probs=53.9
Q ss_pred ccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh-----CCCccEEEEeCCcccCCC-------------cHHH
Q 046241 327 EVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD-----NGSVDSIFHIGDISYATG-------------FLVE 388 (638)
Q Consensus 327 ~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----~~~pDfvl~~GDi~y~~g-------------~~~~ 388 (638)
+.+++++++|.|.+...- -...+..+++.+. +.+...++.+||.++.-| ...|
T Consensus 224 e~v~v~~isDih~GSk~F---------~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~q 294 (481)
T COG1311 224 ERVYVALISDIHRGSKEF---------LEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQ 294 (481)
T ss_pred cceEEEEEeeeecccHHH---------HHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHH
Confidence 349999999999864210 1223333444332 234578999999996432 1246
Q ss_pred HHHHHHhhhhhccCcceEEecCCCccC
Q 046241 389 WDFFLHQISPVASRVSYMTAIGNHERD 415 (638)
Q Consensus 389 wd~f~~~l~~l~~~vP~~~v~GNHD~~ 415 (638)
++++.+.+..+...+-+++.|||||..
T Consensus 295 y~~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 295 YEELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHHHHhhCCCCceEEEecCCCCcc
Confidence 777777777777788899999999973
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0066 Score=62.66 Aligned_cols=64 Identities=19% Similarity=0.295 Sum_probs=43.4
Q ss_pred EEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC-CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEecC
Q 046241 332 LTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN-GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIG 410 (638)
Q Consensus 332 ~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 410 (638)
.++||+|. ....++++++.+.. .+.|.++++||+++. |..+ .+..+.+..+. ..+..+.|
T Consensus 2 yvIGDIHG--------------~~~~L~~LL~~i~~~~~~D~Li~lGDlVdR-Gp~s--~evl~~l~~l~--~~v~~VlG 62 (257)
T cd07422 2 YAIGDIQG--------------CYDELQRLLEKINFDPAKDRLWLVGDLVNR-GPDS--LETLRFVKSLG--DSAKTVLG 62 (257)
T ss_pred EEEECCCC--------------CHHHHHHHHHhcCCCCCCCEEEEecCcCCC-CcCH--HHHHHHHHhcC--CCeEEEcC
Confidence 58999995 34667777777653 468999999999964 4322 12333333332 36789999
Q ss_pred CCcc
Q 046241 411 NHER 414 (638)
Q Consensus 411 NHD~ 414 (638)
|||.
T Consensus 63 NHD~ 66 (257)
T cd07422 63 NHDL 66 (257)
T ss_pred CchH
Confidence 9996
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.01 Score=61.71 Aligned_cols=66 Identities=18% Similarity=0.310 Sum_probs=43.8
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh-CCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD-NGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+..++||+|. ....++++++++. +...|-++++||+++.+....+ ..+.+..+. ..+..+
T Consensus 2 ~~YvIGDIHG--------------c~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sle---vL~~l~~l~--~~~~~V 62 (279)
T TIGR00668 2 ATYLIGDLHG--------------CYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLE---VLRYVKSLG--DAVRLV 62 (279)
T ss_pred cEEEEEcccC--------------CHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHH---HHHHHHhcC--CCeEEE
Confidence 4689999995 3566788888875 3467999999999965433222 222222221 235689
Q ss_pred cCCCcc
Q 046241 409 IGNHER 414 (638)
Q Consensus 409 ~GNHD~ 414 (638)
.||||.
T Consensus 63 lGNHD~ 68 (279)
T TIGR00668 63 LGNHDL 68 (279)
T ss_pred EChhHH
Confidence 999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.039 Score=51.76 Aligned_cols=79 Identities=18% Similarity=0.225 Sum_probs=42.7
Q ss_pred EEEEEEecCCCCCCCC-CcccccCCC--hHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcce
Q 046241 329 LRFLTYGDMGKAPLDD-SAEHYIQPG--SLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~-~~~~~~~pg--~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~ 405 (638)
..+.++||+|.+...- +...+..+. ....+....+.+ ..-|.+.|+||++....... .+...++.+...+
T Consensus 4 ~mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv--~p~D~lwhLGDl~~~~n~~~---~a~~IlerLnGrk-- 76 (186)
T COG4186 4 TMMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTV--GPDDVLWHLGDLSSGANRER---AAGLILERLNGRK-- 76 (186)
T ss_pred eEEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcC--CccceEEEecccccccchhh---HHHHHHHHcCCcE--
Confidence 3467889999865321 111111111 122223333333 34578999999996543322 2334555554444
Q ss_pred EEecCCCcc
Q 046241 406 MTAIGNHER 414 (638)
Q Consensus 406 ~~v~GNHD~ 414 (638)
..++||||-
T Consensus 77 hlv~GNhDk 85 (186)
T COG4186 77 HLVPGNHDK 85 (186)
T ss_pred EEeeCCCCC
Confidence 889999996
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.01 Score=59.82 Aligned_cols=86 Identities=15% Similarity=0.141 Sum_probs=54.0
Q ss_pred EEEEEEecCCCCCCCCCcc--cccCCCh-HHHHHHHHHHhhCCCccEEEEeCCcccCCCc--HHHHHHHHHhhhhhccCc
Q 046241 329 LRFLTYGDMGKAPLDDSAE--HYIQPGS-LSVIKAMADEVDNGSVDSIFHIGDISYATGF--LVEWDFFLHQISPVASRV 403 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~--~~~~pg~-~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~--~~~wd~f~~~l~~l~~~v 403 (638)
-+.++++|+|.+-...-.+ .+..+-+ ..+.+.+.+.++..+|+-++.+||+-.+-+. ..+|+.....++.+...
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~- 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER- 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC-
Confidence 4689999999875322111 1222212 3444555556778999999999999876543 34555444444433322
Q ss_pred ceEEecCCCccC
Q 046241 404 SYMTAIGNHERD 415 (638)
Q Consensus 404 P~~~v~GNHD~~ 415 (638)
-+..+.||||-+
T Consensus 99 evi~i~GNHD~~ 110 (235)
T COG1407 99 EVIIIRGNHDNG 110 (235)
T ss_pred cEEEEeccCCCc
Confidence 599999999964
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.11 Score=52.80 Aligned_cols=58 Identities=19% Similarity=0.202 Sum_probs=36.5
Q ss_pred HHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 481 MKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 481 L~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
+++.++++. .+...+||+.|-..-.... .... .+.+..-+.+.++|+++.||.|..+.
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~--p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~ 219 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE--PTDE-QRELAHALIDAGADVVIGHHPHVLQP 219 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC--CCHH-HHHHHHHHHHcCCCEEEcCCCCcCCc
Confidence 444444443 3578999999977632211 1222 23444445557899999999998874
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.28 Score=50.04 Aligned_cols=162 Identities=15% Similarity=0.153 Sum_probs=79.6
Q ss_pred ChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcH---HHHHHHHHhhhhhccCcceEEecCCCccCCCCCCCCcccCCCC
Q 046241 353 GSLSVIKAMADEVDNGSVDSIFHIGDISYATGFL---VEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDS 429 (638)
Q Consensus 353 g~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~---~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds 429 (638)
|-..+.+.|-+..++.++||||..|.++ +.|.. ...+++++. .+- ..+.|||=++... .+..-+.
T Consensus 11 Gr~~v~~~Lp~L~~~~~~DfVIaNgENa-a~G~Git~~~~~~L~~~------GvD-viT~GNH~wdkke----i~~~i~~ 78 (253)
T PF13277_consen 11 GRRAVKEHLPELKEEYGIDFVIANGENA-AGGFGITPKIAEELFKA------GVD-VITMGNHIWDKKE----IFDFIDK 78 (253)
T ss_dssp HHHHHHHHHHHHGG--G-SEEEEE-TTT-TTTSS--HHHHHHHHHH------T-S-EEE--TTTTSSTT----HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCEEEECCccc-CCCCCCCHHHHHHHHhc------CCC-EEecCcccccCcH----HHHHHhc
Confidence 3333444444444568999999999999 55543 333333332 333 4578999875322 1000000
Q ss_pred CCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCC--CCCCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccC
Q 046241 430 GGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTE--HDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSS 507 (638)
Q Consensus 430 ~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~--~~~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss 507 (638)
.....+-.++|...++.-|..++.++.++.+++-. ........-+..+++.|++. +.+.+.+||=+|.=.-
T Consensus 79 ----~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEaT-- 151 (253)
T PF13277_consen 79 ----EPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEAT-- 151 (253)
T ss_dssp -----SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S-H--
T ss_pred ----CCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCcH--
Confidence 00011113445555577899999999888777753 22222223344455555543 2577889998994321
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 508 LSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 508 ~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
--+.-.-.+-.-+|.+|+-=|+|..-
T Consensus 152 --------SEK~A~g~~lDGrvsaV~GTHTHVqT 177 (253)
T PF13277_consen 152 --------SEKQAMGWYLDGRVSAVVGTHTHVQT 177 (253)
T ss_dssp --------HHHHHHHHHHBTTBSEEEEESSSS-B
T ss_pred --------HHHHHHHHHhCCcEEEEEeCCCCccC
Confidence 11223345567799999999999854
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.02 Score=58.44 Aligned_cols=165 Identities=19% Similarity=0.192 Sum_probs=93.8
Q ss_pred ccEEEEeCCcccCCCcH-------HHHHHHHH----hhhhhccCcceEEecCCCccCCCCC--CCCcccCCCCCCccchh
Q 046241 370 VDSIFHIGDISYATGFL-------VEWDFFLH----QISPVASRVSYMTAIGNHERDYLGS--SGSVYESPDSGGECGVA 436 (638)
Q Consensus 370 pDfvl~~GDi~y~~g~~-------~~wd~f~~----~l~~l~~~vP~~~v~GNHD~~~~~~--sgs~y~~~ds~ge~~~~ 436 (638)
|=-++..||++++.+-. .++.+|.. ...++...+|+|+-.||||.+-++. +-.+|+. | ...
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRr-----E-lrd 200 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRR-----E-LRD 200 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHH-----H-HHH
Confidence 33467788999765421 12222221 2234445699999999999864331 1112210 0 111
Q ss_pred cccc-------ccC--CCC--CCCCCeEEEEECCEEEEEEeCCCCCC--CcHHHHHHHHHHhccccCCCCCeEEEEeccC
Q 046241 437 YETY-------FPM--PIP--ARDKPWYSIEQAGVHFTVMSTEHDWS--ENSEQYEWMKKDMASVDRSKTPWLIFSGHRP 503 (638)
Q Consensus 437 y~~~-------f~~--P~~--~~~~~yYsfd~G~v~fi~LDT~~~~~--~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P 503 (638)
|... |.. |.. ...+.-||+++|++|.+-+-+...-. -...-+-||+.+|........| ++++.|..
T Consensus 201 yve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyG 279 (392)
T COG5555 201 YVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYG 279 (392)
T ss_pred HHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhC
Confidence 1111 111 111 12345689999999888776532110 1123357999999875433444 78888886
Q ss_pred Cc--cCCCC----------------CCCHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 504 MY--SSLSS----------------SVDNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 504 ~y--ss~~~----------------~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
.- ++..+ .....-+..|...++-|+|...+.||.|...
T Consensus 280 wdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 280 WDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred ccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccc
Confidence 53 22211 1112236788888999999999999999864
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.34 Score=49.72 Aligned_cols=63 Identities=19% Similarity=0.190 Sum_probs=43.7
Q ss_pred HHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEcccccccee
Q 046241 477 QYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 477 Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
+.+.+.+++++++ ++..++||+.|.-.-.. ....+. .+.+...+.+.++|+|+.+|-|..+-.
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~--~~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~ 231 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYE--NYPTPE-QRELARALIDAGADIIIGHHPHVIQPV 231 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCC--CCCCHH-HHHHHHHHHHcCCCEEEeCCCCcccce
Confidence 4577888888775 67889999999753211 112333 344555555689999999999998754
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.089 Score=58.28 Aligned_cols=53 Identities=17% Similarity=0.156 Sum_probs=41.6
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCC
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT 383 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~ 383 (638)
+||++..|.|.+..... ......+..+++.|+..++..+.|+||..||+..++
T Consensus 14 irILVaTD~HlGY~EkD--~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKD--AVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred eEEEEeecCccccccCC--cccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 99999999998754321 112234678889999988899999999999999775
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.093 Score=54.68 Aligned_cols=71 Identities=15% Similarity=0.167 Sum_probs=43.7
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHH-HHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVE-WDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~-wd~f~~~l~~l~~~vP~~~ 407 (638)
-+++++||+|.. ...+.++.+.......+-++++||+++.+....+ ....+ .++ +...-.++.
T Consensus 28 ~~i~vvGDiHG~--------------~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~-~lk-~~~p~~v~l 91 (271)
T smart00156 28 APVTVCGDIHGQ--------------FDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLF-ALK-ILYPNRVVL 91 (271)
T ss_pred CCEEEEEeCcCC--------------HHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHH-HHH-hcCCCCEEE
Confidence 358999999943 4455666665555667889999999964432221 11111 111 112335789
Q ss_pred ecCCCccC
Q 046241 408 AIGNHERD 415 (638)
Q Consensus 408 v~GNHD~~ 415 (638)
+.||||..
T Consensus 92 lrGNHE~~ 99 (271)
T smart00156 92 LRGNHESR 99 (271)
T ss_pred EeccccHH
Confidence 99999974
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.28 Score=40.34 Aligned_cols=70 Identities=26% Similarity=0.419 Sum_probs=42.6
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCC-C----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDK-E----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~-~----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
+|..+++... ..+++.|+|..... . .-.|+|....... ....... + +-.+.+
T Consensus 2 ~P~~l~v~~~--~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~-~~~~~~~-----------~---------~~~~~~ 58 (85)
T PF00041_consen 2 APENLSVSNI--SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS-DWQEVTV-----------P---------GNETSY 58 (85)
T ss_dssp SSEEEEEEEE--CSSEEEEEEEESSSTSSSESEEEEEEEETTSSS-EEEEEEE-----------E---------TTSSEE
T ss_pred cCcCeEEEEC--CCCEEEEEEECCCCCCCCeeEEEEEEEecccce-eeeeeee-----------e---------eeeeee
Confidence 4666676665 36899999998842 1 2367775433221 0111100 1 111367
Q ss_pred EEcCCCCCcEEEEEEeeC
Q 046241 290 VMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~ 307 (638)
.++||+|+|+|.++|..-
T Consensus 59 ~i~~L~p~t~Y~~~v~a~ 76 (85)
T PF00041_consen 59 TITGLQPGTTYEFRVRAV 76 (85)
T ss_dssp EEESCCTTSEEEEEEEEE
T ss_pred eeccCCCCCEEEEEEEEE
Confidence 899999999999999853
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.15 Score=54.00 Aligned_cols=69 Identities=14% Similarity=0.140 Sum_probs=42.1
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhc--cCcceEE
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVA--SRVSYMT 407 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~--~~vP~~~ 407 (638)
+++++||+|.. ...+.++.+.......+-++++||+++.+....+ .+..+..+. ...-++.
T Consensus 44 ~i~ViGDIHG~--------------~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~E---vi~lL~~lki~~p~~v~l 106 (305)
T cd07416 44 PVTVCGDIHGQ--------------FYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSIE---CVLYLWALKILYPKTLFL 106 (305)
T ss_pred CEEEEEeCCCC--------------HHHHHHHHHhcCCCCCceEEEECCccCCCCChHH---HHHHHHHHHhhcCCCEEE
Confidence 58899999953 3445556665544456889999999964322211 111121221 1235788
Q ss_pred ecCCCccC
Q 046241 408 AIGNHERD 415 (638)
Q Consensus 408 v~GNHD~~ 415 (638)
+.||||..
T Consensus 107 LRGNHE~~ 114 (305)
T cd07416 107 LRGNHECR 114 (305)
T ss_pred EeCCCcHH
Confidence 99999973
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.51 Score=54.94 Aligned_cols=122 Identities=22% Similarity=0.382 Sum_probs=69.1
Q ss_pred EEEEeeeccc--eEEEEEec-CCC----cceeeccccccccCCCCCCce-EEEeecCCCCCceEEEEEeCCCCC-----c
Q 046241 177 KFHVINIRTD--IEFVFFAG-GFD----TPCILNRTNPINFANPKSPLY-GHLSSSDSTATSMRVTWVSGDKEP-----Q 243 (638)
Q Consensus 177 ~~~l~n~r~~--~~f~~f~~-~~~----~~~~~~~s~~~~f~~~~~P~~-~~ls~~~~~~~sm~V~W~t~~~~~-----~ 243 (638)
++.+-++|+. |.|-++.- |.+ .|...+ +-.|+- |-.+|.. .++-+.....++++++|.-.+... -
T Consensus 399 ~V~v~~L~ah~~YTFeV~AvNgVS~lsp~~~~~a-~vnItt-~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildY 476 (996)
T KOG0196|consen 399 SVTVSDLLAHTNYTFEVEAVNGVSDLSPFPRQFA-SVNITT-NQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDY 476 (996)
T ss_pred eEEEeccccccccEEEEEEeecccccCCCCCcce-eEEeec-cccCCCccceEEEeeeccCceEEecCCCCCCCCcceeE
Confidence 4456666654 78887762 322 121111 111221 2233333 344444556789999999776543 2
Q ss_pred EEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEEC
Q 046241 244 QVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKT 319 (638)
Q Consensus 244 ~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T 319 (638)
.|+|-++.... .+|.. +.+ -..+|+++||+|||.|.+||.... +..|....|.|
T Consensus 477 Evky~ek~~~e---~~~~~--------~~t-----------~~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT 534 (996)
T KOG0196|consen 477 EVKYYEKDEDE---RSYST--------LKT-----------KTTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQT 534 (996)
T ss_pred EEEEeeccccc---cceeE--------Eec-----------ccceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeee
Confidence 56665432211 11111 001 123789999999999999998632 24688999999
Q ss_pred CCC
Q 046241 320 PPA 322 (638)
Q Consensus 320 ~p~ 322 (638)
.+.
T Consensus 535 ~~~ 537 (996)
T KOG0196|consen 535 LPS 537 (996)
T ss_pred cCc
Confidence 875
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.13 Score=54.71 Aligned_cols=70 Identities=14% Similarity=0.077 Sum_probs=40.8
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC-CccEEEEeCCcccCCCcHHH-HHHHHHhhhhhccCcceEE
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG-SVDSIFHIGDISYATGFLVE-WDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfvl~~GDi~y~~g~~~~-wd~f~~~l~~l~~~vP~~~ 407 (638)
+++++||+|.. ...+.++.+..... .-+-++++||+++.+...-+ ....+. ++ +...--++.
T Consensus 52 ~~~vvGDiHG~--------------~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~-lk-~~~p~~v~l 115 (321)
T cd07420 52 QVTICGDLHGK--------------LDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIEILIILFA-FF-LVYPNEVHL 115 (321)
T ss_pred CeEEEEeCCCC--------------HHHHHHHHHHcCCCCccceEEEeccccCCCCCcHHHHHHHHH-Hh-hcCCCcEEE
Confidence 68999999953 44555665544322 23679999999965432221 111111 11 111234788
Q ss_pred ecCCCccC
Q 046241 408 AIGNHERD 415 (638)
Q Consensus 408 v~GNHD~~ 415 (638)
+.||||..
T Consensus 116 lRGNHE~~ 123 (321)
T cd07420 116 NRGNHEDH 123 (321)
T ss_pred ecCchhhh
Confidence 99999974
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.14 Score=53.65 Aligned_cols=69 Identities=13% Similarity=0.106 Sum_probs=41.7
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhh--ccCcceEE
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPV--ASRVSYMT 407 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l--~~~vP~~~ 407 (638)
.++++||+|.. ...+.++.+.......+-++++||+++. |.... +....+..+ .....++.
T Consensus 43 ~i~vvGDIHG~--------------~~dL~~ll~~~~~~~~~~~lfLGDyVDR-G~~s~--evl~ll~~lk~~~p~~v~l 105 (285)
T cd07415 43 PVTVCGDIHGQ--------------FYDLLELFRVGGDPPDTNYLFLGDYVDR-GYYSV--ETFLLLLALKVRYPDRITL 105 (285)
T ss_pred CEEEEEeCCCC--------------HHHHHHHHHHcCCCCCCeEEEEeEECCC-CcCHH--HHHHHHHHHhhcCCCcEEE
Confidence 38899999943 3445555555444455778999999965 43221 111111111 12345899
Q ss_pred ecCCCccC
Q 046241 408 AIGNHERD 415 (638)
Q Consensus 408 v~GNHD~~ 415 (638)
+.||||..
T Consensus 106 lrGNHE~~ 113 (285)
T cd07415 106 LRGNHESR 113 (285)
T ss_pred EecccchH
Confidence 99999973
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.48 Score=44.22 Aligned_cols=85 Identities=18% Similarity=0.088 Sum_probs=55.4
Q ss_pred HHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcce
Q 046241 519 AVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSL 598 (638)
Q Consensus 519 ~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~ 598 (638)
.|.-|-++.+||+.++||+|..+.... +|-.+|--|++-...... .
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~Aye~-------------------------eg~ffvnPGSaTGAfn~~---------~ 143 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFEAYEH-------------------------EGKFFVNPGSATGAFNVS---------D 143 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEEEEEe-------------------------CCcEEeCCCcccCCCccc---------c
Confidence 455566778999999999999886421 233455556552211100 0
Q ss_pred eeeccccEEEEEEeCCEEEEEEEEcCCCcE-EEEEEEEec
Q 046241 599 IRISKFGYLRGNANKEEMKFEFVNSDTREV-EDSFRIIKA 637 (638)
Q Consensus 599 ~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~v-~D~f~I~k~ 637 (638)
.......|+.+.+.+..+....|.--+|+| +|..+..|+
T Consensus 144 t~~~~PSFvLmDiqg~~~v~YvY~lidgeVkVdki~ykK~ 183 (183)
T KOG3325|consen 144 TDIIVPSFVLMDIQGSTVVTYVYRLIDGEVKVDKIEYKKP 183 (183)
T ss_pred cCCCCCceEEEEecCCEEEEEEeeeeCCcEEEEEEEecCC
Confidence 011345799999999988887777778887 677766553
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.14 Score=53.90 Aligned_cols=68 Identities=13% Similarity=0.122 Sum_probs=40.9
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhh--hhccCcceEEe
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQIS--PVASRVSYMTA 408 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~--~l~~~vP~~~v 408 (638)
+.++||+|.. ...+.++.+.+.....+-++++||+++. |.... +. ...+- .+.....++.+
T Consensus 54 ~~ViGDIHG~--------------~~~L~~l~~~~~~~~~~~~lfLGDyVDR-G~~s~-ev-l~ll~~lk~~~p~~v~ll 116 (294)
T PTZ00244 54 VRVCGDTHGQ--------------YYDLLRIFEKCGFPPYSNYLFLGDYVDR-GKHSV-ET-ITLQFCYKIVYPENFFLL 116 (294)
T ss_pred ceeeccCCCC--------------HHHHHHHHHHcCCCCcccEEEeeeEecC-CCCHH-HH-HHHHHHHhhccCCeEEEE
Confidence 6789999943 4455566665544455568899999965 43221 11 11111 12224468999
Q ss_pred cCCCccC
Q 046241 409 IGNHERD 415 (638)
Q Consensus 409 ~GNHD~~ 415 (638)
.||||..
T Consensus 117 rGNHE~~ 123 (294)
T PTZ00244 117 RGNHECA 123 (294)
T ss_pred ecccchH
Confidence 9999963
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.18 Score=53.06 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=42.1
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEec
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAI 409 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 409 (638)
.++++||+|.. ...+.++.+.......+-++++||+++.+....+-=.+...++ +.....++.+.
T Consensus 51 ~i~viGDIHG~--------------~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk-~~~p~~i~llr 115 (293)
T cd07414 51 PLKICGDIHGQ--------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK-IKYPENFFLLR 115 (293)
T ss_pred ceEEEEecCCC--------------HHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhh-hhCCCcEEEEe
Confidence 48899999942 3445556665544556778999999965432222111111111 11123478899
Q ss_pred CCCccC
Q 046241 410 GNHERD 415 (638)
Q Consensus 410 GNHD~~ 415 (638)
||||..
T Consensus 116 GNHE~~ 121 (293)
T cd07414 116 GNHECA 121 (293)
T ss_pred cccchh
Confidence 999974
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.18 Score=54.71 Aligned_cols=70 Identities=14% Similarity=0.061 Sum_probs=41.2
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccCCCcHHHHHHHHHhhhhh--ccCcce
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYATGFLVEWDFFLHQISPV--ASRVSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~~g~~~~wd~f~~~l~~l--~~~vP~ 405 (638)
-++.++||+|.. ...+..+.+.+.-... +.++++||+++. |.... + .+..+..+ ...--+
T Consensus 66 ~~i~VvGDIHG~--------------~~dL~~ll~~~g~~~~~~~ylFLGDyVDR-Gp~Sl-E-vl~lL~~lki~~p~~v 128 (377)
T cd07418 66 CEVVVVGDVHGQ--------------LHDVLFLLEDAGFPDQNRFYVFNGDYVDR-GAWGL-E-TFLLLLSWKVLLPDRV 128 (377)
T ss_pred CCEEEEEecCCC--------------HHHHHHHHHHhCCCCCCceEEEeccccCC-CCChH-H-HHHHHHHHhhccCCeE
Confidence 358999999953 4455566655432223 458999999964 43221 1 11111111 123357
Q ss_pred EEecCCCccC
Q 046241 406 MTAIGNHERD 415 (638)
Q Consensus 406 ~~v~GNHD~~ 415 (638)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8999999974
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.22 Score=52.69 Aligned_cols=69 Identities=17% Similarity=0.174 Sum_probs=41.1
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhh--ccCcceEE
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPV--ASRVSYMT 407 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l--~~~vP~~~ 407 (638)
.++++||+|.. ...+.++.+.+.....+-++++||+++. |.... + ....+-.+ ....-++.
T Consensus 44 ~i~vvGDIHG~--------------~~~L~~l~~~~~~~~~~~~lfLGDyVDR-G~~s~-e-vl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 44 PVNVCGDIHGQ--------------FYDLQALFKEGGDIPNANYIFIGDFVDR-GYNSV-E-TMEYLLCLKVKYPGNITL 106 (303)
T ss_pred CEEEEEeCCCC--------------HHHHHHHHHhcCCCCCceEEEeeeEcCC-CCCHH-H-HHHHHHHhhhcCCCcEEE
Confidence 37889999943 3445556555444455678999999965 43221 1 11111111 11234789
Q ss_pred ecCCCccC
Q 046241 408 AIGNHERD 415 (638)
Q Consensus 408 v~GNHD~~ 415 (638)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999963
|
|
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.30 E-value=2 Score=44.28 Aligned_cols=67 Identities=22% Similarity=0.354 Sum_probs=43.2
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
.||+.++|.|.-..+ +. ++ ..-|+++|+||... .|...+-..|.+.+..+.-.. =+++
T Consensus 62 ~r~VcisdtH~~~~~-----------------i~-~~--p~gDvlihagdfT~-~g~~~ev~~fn~~~gslph~y-KIVI 119 (305)
T KOG3947|consen 62 ARFVCISDTHELTFD-----------------IN-DI--PDGDVLIHAGDFTN-LGLPEEVIKFNEWLGSLPHEY-KIVI 119 (305)
T ss_pred eEEEEecCcccccCc-----------------cc-cC--CCCceEEeccCCcc-ccCHHHHHhhhHHhccCccee-eEEE
Confidence 999999999964322 11 12 56789999999994 455555455555444332111 2678
Q ss_pred cCCCccCCC
Q 046241 409 IGNHERDYL 417 (638)
Q Consensus 409 ~GNHD~~~~ 417 (638)
.||||....
T Consensus 120 aGNHELtFd 128 (305)
T KOG3947|consen 120 AGNHELTFD 128 (305)
T ss_pred eeccceeec
Confidence 999998544
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.21 Score=53.11 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=40.9
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhh--ccCcceEE
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPV--ASRVSYMT 407 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l--~~~vP~~~ 407 (638)
+++++||+|.. ...+.++.+.......+-++++||+++. |.... +. +..+..+ ...-.++.
T Consensus 60 ~i~vvGDIHG~--------------~~dL~~l~~~~g~~~~~~ylfLGDyVDR-G~~s~-ev-l~ll~~lki~~p~~v~l 122 (320)
T PTZ00480 60 PLKICGDVHGQ--------------YFDLLRLFEYGGYPPESNYLFLGDYVDR-GKQSL-ET-ICLLLAYKIKYPENFFL 122 (320)
T ss_pred CeEEEeecccC--------------HHHHHHHHHhcCCCCcceEEEeceecCC-CCCcH-HH-HHHHHHhcccCCCceEE
Confidence 48899999943 3445555555444455678899999964 43211 11 1111111 12235789
Q ss_pred ecCCCccC
Q 046241 408 AIGNHERD 415 (638)
Q Consensus 408 v~GNHD~~ 415 (638)
+.||||..
T Consensus 123 lRGNHE~~ 130 (320)
T PTZ00480 123 LRGNHECA 130 (320)
T ss_pred Eecccchh
Confidence 99999974
|
|
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.48 Score=53.43 Aligned_cols=58 Identities=19% Similarity=0.341 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhC-CCeE-EEEccccccc
Q 046241 475 SEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN-KVDL-ALFGHVHNYE 541 (638)
Q Consensus 475 ~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~-~Vdl-vlsGH~H~Ye 541 (638)
-.|.+|-.+.++. .+..-+|+++|.|.-. +.+..-.+..+...+ ++++ ||-||.|...
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~------~~e~~~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRD------DDEWKSLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEeccccccc------chhhhhHHHHHhhhCCCCceEEECchhhhhh
Confidence 4567888887775 5677789999998632 111111333344444 7888 9999999843
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.39 Score=51.18 Aligned_cols=23 Identities=17% Similarity=0.297 Sum_probs=20.1
Q ss_pred HHHHHHHHHhCCCeEEEEccccc
Q 046241 517 VDAVEPLLLDNKVDLALFGHVHN 539 (638)
Q Consensus 517 r~~l~~Ll~k~~VdlvlsGH~H~ 539 (638)
.+.+...+++.+.++++=||.-.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 56778899999999999999854
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=91.52 E-value=0.35 Score=47.98 Aligned_cols=76 Identities=8% Similarity=0.077 Sum_probs=45.9
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh-CCCccEEEEeCCcccCCCcHH---------HH-H----HHHHh
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD-NGSVDSIFHIGDISYATGFLV---------EW-D----FFLHQ 395 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfvl~~GDi~y~~g~~~---------~w-d----~f~~~ 395 (638)
|++++|.+..... ...+.++.+++.+. +.+|+.+|++|+++....... .. . .+.+.
T Consensus 1 Iv~~Sg~~~~~~~---------~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (209)
T PF04042_consen 1 IVFASGPFLDSDN---------LSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSF 71 (209)
T ss_dssp EEEEES--CTTT----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHH
T ss_pred CEEEecCccCCCH---------hHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHH
Confidence 5788898876322 13556666666666 788999999999997543221 11 1 12233
Q ss_pred hhhhccCcceEEecCCCccC
Q 046241 396 ISPVASRVSYMTAIGNHERD 415 (638)
Q Consensus 396 l~~l~~~vP~~~v~GNHD~~ 415 (638)
++.+...++++.+||+||..
T Consensus 72 ~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 72 LESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HCCCHCCSEEEEE--TTCTT
T ss_pred HhhcccccEEEEeCCCcccc
Confidence 44555688999999999973
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.76 E-value=0.82 Score=48.62 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=19.0
Q ss_pred HHHHHHHHHhCCCeEEEEccc
Q 046241 517 VDAVEPLLLDNKVDLALFGHV 537 (638)
Q Consensus 517 r~~l~~Ll~k~~VdlvlsGH~ 537 (638)
.+.++..+++++.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 567888999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=80.23 E-value=12 Score=29.77 Aligned_cols=20 Identities=25% Similarity=0.670 Sum_probs=17.6
Q ss_pred EEEEEcCCCCCcEEEEEEee
Q 046241 287 HTAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~ 306 (638)
..+.+.+|.|+++|.++|..
T Consensus 57 ~~~~i~~l~p~~~Y~~~v~a 76 (93)
T cd00063 57 TSYTLTGLKPGTEYEFRVRA 76 (93)
T ss_pred cEEEEccccCCCEEEEEEEE
Confidence 56788999999999999965
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 638 | ||||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 8e-23 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 8e-23 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 8e-23 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 3e-19 | ||
| 1ute_A | 313 | Pig Purple Acid Phosphatase Complexed With Phosphat | 2e-04 |
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
| >pdb|1UTE|A Chain A, Pig Purple Acid Phosphatase Complexed With Phosphate Length = 313 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 638 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 6e-99 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 5e-97 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 5e-46 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 9e-32 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 5e-07 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 4e-06 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 2e-05 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 3e-05 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-04 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 308 bits (789), Expect = 6e-99
Identities = 95/441 (21%), Positives = 164/441 (37%), Gaps = 55/441 (12%)
Query: 211 ANPKSPLYGHLSSSDSTATSMRVTWVSGDK-EPQQVQYGDGKSETSKVTTFTQDDMCNAT 269
+P H++ D +M ++WV+ D+ V+Y K+ ++
Sbjct: 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGK-------- 65
Query: 270 ALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVL 329
F + G+IH + L+ + + Y G + + F TPP G
Sbjct: 66 ---MSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLR--NTTRRFSFITPPQTGLDVPY 120
Query: 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFL--- 386
F GD+G++ ++ + + + ++ +GD+SYA +
Sbjct: 121 TFGLIGDLGQSFDSNTTLSHYE-------------LSPKKGQTVLFVGDLSYADRYPNHD 167
Query: 387 -VEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPI 445
V WD + + ++ GNHE ++ + E + + +P
Sbjct: 168 NVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE--------INETEPFKPFSYRYHVPY 219
Query: 446 PARDKP---WYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHR 502
A WYSI++A H V+S+ + + QY W+KK++ V RS+TPWLI H
Sbjct: 220 EASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 279
Query: 503 PMYSSLSS--SVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDAN 560
P+Y+S + E + KVD+ GHVH YER+ V +
Sbjct: 280 PLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAY------KIT 333
Query: 561 GIDTYDHSNYSAPVQAVIGMAG--FTLDKFPDNADHTWSLIRISKFGYLRGNA-NKEEMK 617
+ SAPV IG AG +D +S R + FG+ + N+
Sbjct: 334 NGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAH 393
Query: 618 FEFVNSDTREVE--DSFRIIK 636
F + + DS
Sbjct: 394 FSWNRNQDGVAVEADSVWFFN 414
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 303 bits (776), Expect = 5e-97
Identities = 96/447 (21%), Positives = 163/447 (36%), Gaps = 66/447 (14%)
Query: 211 ANPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQ--VQYGDGKSE-----TSKVTTFTQD 263
+ +P H++ D + ++W + + V Y S+ V T+
Sbjct: 20 SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYY 79
Query: 264 DMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAG 323
+ + +IH + L + YR G + F TPP
Sbjct: 80 NYTS----------------AFIHHCTIKDLEYDTKYYYRLGFG--DAKRQFWFVTPPKP 121
Query: 324 GSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT 383
G F GD+G+ S + + G ++ +GD+SY+
Sbjct: 122 GPDVPYVFGLIGDIGQTH-----------DSNTTLTHYEQNSAKG--QAVLFMGDLSYSN 168
Query: 384 GFLVE----WDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYET 439
+ WD + + ++ GNHE DY G + V +
Sbjct: 169 RWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIG--------EYQPFVPFTN 220
Query: 440 YFPMP---IPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWL 496
+P P + D WY+I++A H V+S+ + + S QY+W ++ V+RS+TPWL
Sbjct: 221 RYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWL 280
Query: 497 IFSGHRPMYSSLSS--SVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAM 554
I H P+Y+S + EP + KVD+ GHVH+YER+ V +
Sbjct: 281 IVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAY--- 337
Query: 555 PTKDANGIDTYDHSNYSAPVQAVIGMAG--FTLDKFPDNADHTWSLIRISKFGYLRGNA- 611
+ S+ SAPV IG G L ++S R + FG+ +
Sbjct: 338 ---NIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIK 394
Query: 612 NKEEMKFEFVNSDTREV--EDSFRIIK 636
N+ F + + DS ++
Sbjct: 395 NRTHAHFSWHRNQDGASVEADSLWLLN 421
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 164 bits (416), Expect = 5e-46
Identities = 62/329 (18%), Positives = 101/329 (30%), Gaps = 54/329 (16%)
Query: 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVE 388
LRF+ GD G P + ++ KA+A V D I +GD Y TG
Sbjct: 7 LRFVAVGDWGGVPNA----PFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62
Query: 389 WD------FFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFP 442
D F P V + GNH+ S+ Y Y
Sbjct: 63 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPY-YRLR 121
Query: 443 MPIPARDKPWYSIEQAGVHFTVMSTEH---------DWSENSEQYEWMKKDMASVDRSKT 493
IP + V S + + + Q W+KK +A+ +K
Sbjct: 122 FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKE 178
Query: 494 PWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLA 553
+++ +GH P++S + V + PLL +KV L GH HN +
Sbjct: 179 DYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDE------- 231
Query: 554 MPTKDANGIDTYDHSNYSAPVQAVIGMAGF------TLDKFPDNADHTWSLIRISKFGYL 607
+ + G F L K P+ S G+
Sbjct: 232 -----------------NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFA 274
Query: 608 RGNANKEEMKFEFVNSDTREVEDSFRIIK 636
+EM ++ + + ++ +
Sbjct: 275 YVEITPKEMSVTYIEASG-KSLFKTKLPR 302
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 125 bits (314), Expect = 9e-32
Identities = 51/343 (14%), Positives = 92/343 (26%), Gaps = 71/343 (20%)
Query: 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLV- 387
LRF + GD GK K + N V I G +
Sbjct: 4 LRFASLGDWGKDTKGQIL----------NAKYFKQFIKNERVTFIVSPGSNFIDGVKGLN 53
Query: 388 --EWDFFLHQI---SPVASRVSYMTAIGNHERDYLGSS---------GSVYESPDSGGEC 433
W + + + T +G + ++ +
Sbjct: 54 DPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDA 113
Query: 434 GVAYETYFPMP------------IPARDKPWYSIEQAGVHFTVMSTEHDWSE------NS 475
+ MP + F + T S +
Sbjct: 114 DATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHE 173
Query: 476 EQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFG 535
+ + +K ++ ++I G +P+YSS S + + PLL D +VDL + G
Sbjct: 174 KAWNDLKSQLSVAK-KIADFIIVVGDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISG 232
Query: 536 HVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHT 595
H +N E + G + K ++
Sbjct: 233 HDNNME-------------------------VIEDNDMAHITCGSGSMSQGKSGMK--NS 265
Query: 596 WSLIRISKFGYLRGNANKEEMKFEFVNSDTREVEDSFRIIKAK 638
SL S G+ + + +FV+S EV + ++ K
Sbjct: 266 KSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKK 308
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 5e-07
Identities = 31/250 (12%), Positives = 73/250 (29%), Gaps = 35/250 (14%)
Query: 312 SDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVD 371
+D + + P + + GK S + A +V++ D
Sbjct: 46 TD-VHYFAPSLTDNGKAFEKYVAAGDGKQLAY----------SDEITDAFLADVESKKTD 94
Query: 372 SIFHIGDISYATGFLVEWDFFLHQISPV-ASRVSYMTAIGNHE------RDYLGSSGSVY 424
+ GD++ G + +++ V + GNH+ R +
Sbjct: 95 VLIISGDLTN-NGEKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPT 153
Query: 425 ESPDSGGECGVAYETYFPMPIPARDKP-WYSIEQA-GVHFTVMST------------EHD 470
++ + + + I + + Y + V ++ T +
Sbjct: 154 DTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTE 213
Query: 471 WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDA--VEPLLLDNK 528
+ +W+K+ A ++ + H + V L +
Sbjct: 214 GGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGA 273
Query: 529 VDLALFGHVH 538
+D +L GH+H
Sbjct: 274 MDFSLSGHIH 283
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 4e-06
Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 30/177 (16%)
Query: 370 VDSIFHIGDISYATGFLVEWDFFLHQISPVASR--VSYMTAIGNHERDYLGSSGSVYESP 427
D+I GD++ G + + P A++ + +GNH D
Sbjct: 67 PDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH--DDRA--------- 114
Query: 428 DSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVM-STEHDWSE---NSEQYEWMKK 483
+ P+ G+ V+ ++ + Q W+ +
Sbjct: 115 --------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAE 166
Query: 484 DMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDA--VEPLLLDNKVDLALFGHVH 538
++A + ++ H P+ S L +V + D + +L V L GH+H
Sbjct: 167 ELA--TPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLH 221
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 2e-05
Identities = 25/216 (11%), Positives = 58/216 (26%), Gaps = 39/216 (18%)
Query: 353 GSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEW----------------------- 389
++ + + D + +G+I E+
Sbjct: 16 ERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYII 75
Query: 390 ---DFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP 446
D F +I + + + G ++ + YE+ + V +E +
Sbjct: 76 ETLDKFFREIGELGVKTFVV--PGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGE 133
Query: 447 ARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYS 506
+ G T E D+ +++ + V+ K L+ + P
Sbjct: 134 FEVIGF------GGLLTEHEFEEDFVLK-YPRWYVEYILKFVNELKPRRLVTIFYTPPIG 186
Query: 507 SLSSSVDNKFV----DAVEPLLLDNKVDLALFGHVH 538
V ++ ++A+ GHV
Sbjct: 187 EFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 3e-05
Identities = 36/262 (13%), Positives = 65/262 (24%), Gaps = 57/262 (21%)
Query: 334 YGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATG-FLVEWDFF 392
Y D+ GS +++ + V + +GDI D
Sbjct: 16 YADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRA 75
Query: 393 LHQISPVASRVS--YMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDK 450
L + S GNHE + +S T + D
Sbjct: 76 LDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQR----TGTDTGSDLIGDDI 131
Query: 451 PWYSIEQA-GVHFTVMST------------------------------------------ 467
Y A F ++
Sbjct: 132 YAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLE 191
Query: 468 ----EHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKF--VDAVE 521
+ + + +Q +W+ + D + LIFS H P++ + + + +
Sbjct: 192 QRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFS-HLPVHPCAADPICLAWNHEAVLS 250
Query: 522 PLLLDNKVDLALFGHVHNYERT 543
L V + GH H+ R
Sbjct: 251 VLRSHQSVLCFIAGHDHDGGRC 272
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 25/176 (14%), Positives = 50/176 (28%), Gaps = 27/176 (15%)
Query: 370 VDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDS 429
D++ GDI G E+ + + + + GNH D
Sbjct: 42 PDAVVVSGDIV-NCGRPEEYQVARQILGSLNYPLYLI--PGNH---------------DD 83
Query: 430 GGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVM-STEHDWSE---NSEQYEWMKKDM 485
+ P + +++ + S+ S+ E W++ +
Sbjct: 84 KALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQL 143
Query: 486 ASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPL-LLDN--KVDLALFGHVH 538
+ P IF H P+ + + L L++ + GH H
Sbjct: 144 F--EGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNH 197
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 6e-04
Identities = 81/559 (14%), Positives = 154/559 (27%), Gaps = 178/559 (31%)
Query: 186 DIEFVF---FAGGFDTPCILNRTNPINFANPKSPLYGH-LSSSDSTATSMRVTWVSGDKE 241
DI VF F FD + + I + + H + S D+ + ++R+ W K+
Sbjct: 20 DILSVFEDAFVDNFDCKDVQDMPKSI-LSKEE---IDHIIMSKDAVSGTLRLFWTLLSKQ 75
Query: 242 PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLR-PSA-T 299
+ VQ F ++ L+ ++ + + + + T R PS T
Sbjct: 76 EEMVQK------------FVEE------VLR---INYKF-----LMSPIKTEQRQPSMMT 109
Query: 300 FSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYI----QPGS- 354
Y D + ++D F V R Y + +A L+ + GS
Sbjct: 110 RMYIEQRDRL-YNDNQVF--AK----YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG 162
Query: 355 ---LSVIKAMADE-VDNGSVDSIF--HIGDISYATGFLVEWDFFLHQISP-VASRVSYMT 407
+ + V IF ++ + + L L+QI P SR + +
Sbjct: 163 KTWV-ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221
Query: 408 AIGNH-------------ERDYLGS--------SGSVYESPDSGGECGVAYETYFPMPIP 446
I + Y + + + + C + T
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS--CKILLTT------- 272
Query: 447 ARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPM-- 504
R K A + H + ++ + + P + + + P
Sbjct: 273 -RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN-PRRL 330
Query: 505 ---------------------YSSLSSSVDNKFVDAVEPLLL-DNKVDLALF-------- 534
L++ ++ ++ +EP L++F
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIE-SSLNVLEPAEYRKMFDRLSVFPPSAHIPT 389
Query: 535 -------------------GHVHNY--------ERTCSVY------KQSCLAMPTKDANG 561
+H Y E T S+ K +
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI 449
Query: 562 IDTYD-HSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGY-LRGNANKEEMKFE 619
+D Y+ + + D P D + S G+ L+ N E
Sbjct: 450 VDHYNIPKTFDSD------------DLIPPYLDQYF----YSHIGHHLK-NIEHPERMTL 492
Query: 620 FVNSDTREVEDSFRIIKAK 638
F R V FR ++ K
Sbjct: 493 F-----RMVFLDFRFLEQK 506
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 638 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.97 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.91 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.89 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.88 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.79 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.53 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.47 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.46 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.37 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.37 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.33 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.31 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.24 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.21 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.19 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.18 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.17 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.11 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.98 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.96 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.94 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.94 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.92 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.89 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.66 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.66 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.58 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.46 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.45 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.37 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.35 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.3 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.06 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.97 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.95 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.92 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.91 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.83 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.78 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.1 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.09 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.08 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.89 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.71 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 96.67 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.44 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.42 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.41 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.34 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.3 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.28 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.2 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.1 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.08 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 96.07 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 95.92 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 95.85 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 95.84 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 95.82 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 95.76 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.75 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 95.73 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.71 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.71 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 95.64 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.59 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 95.58 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 95.58 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 95.58 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 95.51 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 95.4 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 95.36 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.35 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.35 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 95.32 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 95.32 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.17 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 95.16 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 95.12 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 95.03 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 95.0 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.99 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 94.87 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 94.86 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 94.8 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 94.77 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 94.74 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 94.65 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 94.63 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 94.61 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 94.55 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 94.5 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 94.48 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 94.44 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 94.43 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 94.4 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.39 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 94.32 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 94.3 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 94.25 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 94.23 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 94.19 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 94.11 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.06 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 94.03 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 93.91 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 93.9 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 93.88 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 93.83 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 93.83 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 93.76 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 93.73 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 93.72 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 93.61 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 93.56 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 93.34 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 93.32 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 93.3 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 93.3 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 93.28 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 93.23 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 93.2 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 93.19 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 93.01 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 92.85 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 92.84 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 92.84 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 92.51 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 92.48 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 92.44 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 92.41 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 92.26 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 92.11 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 92.09 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 92.05 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 91.9 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 91.7 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 91.67 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 91.61 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 91.56 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 91.35 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 91.22 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 91.17 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 91.14 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 91.01 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 90.98 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 90.97 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 90.9 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 90.88 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 90.84 | |
| 2lfe_A | 138 | E3 ubiquitin-protein ligase HECW2; structural geno | 90.67 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 90.37 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 90.29 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 90.12 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 89.81 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 89.75 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 89.62 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 89.59 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 89.51 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 89.36 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 89.33 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 89.12 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 89.04 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 88.94 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 88.82 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 88.5 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 87.94 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 87.28 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 86.83 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 86.77 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 86.47 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 84.74 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 84.43 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 84.12 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 83.98 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 83.93 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 83.62 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 81.22 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 81.16 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-58 Score=505.45 Aligned_cols=384 Identities=25% Similarity=0.424 Sum_probs=300.5
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeC-CC-CCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSG-DK-EPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~-~~-~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
++++|+|+||++++++.++|+|+|+|. +. ..+.|+|++.+..... +..... . .+ ...-..++++|+|
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~--~~~~~~--~--~~-----~~~~~~~~~~~~v 89 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQK--RAMGTV--V--TY-----KYYNYTSAFIHHC 89 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCE--EEECEE--E--CC-----EETTEECCEEEEE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCce--EEEEEE--E--EE-----EecCCcCCEEEEE
Confidence 467899999999998779999999998 55 6789999976543221 111000 0 00 0001236899999
Q ss_pred EEcCCCCCcEEEEEEeeCCCCcceeeEEECCCCCCCCccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCC
Q 046241 290 VMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGS 369 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~~~~~S~~~sF~T~p~~~~~~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~ 369 (638)
+|+||+|||+|+|||+.+ .||+.++|+|+|.+++..++||+++||+|... ....+++.+.+. ..+
T Consensus 90 ~l~gL~p~t~Y~Yrv~~g--~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~-----------~~~~~l~~i~~~--~~~ 154 (426)
T 1xzw_A 90 TIKDLEYDTKYYYRLGFG--DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH-----------DSNTTLTHYEQN--SAK 154 (426)
T ss_dssp EECCCCTTCEEEEEECCG--GGCEEEEEECCCCCCTTCCEEEEEECSCTTBH-----------HHHHHHHHHHHC--TTC
T ss_pred EECCCCCCCEEEEEECCC--CccceeEEECCCCCCCCCCeEEEEEEeCCCCC-----------chHHHHHHHHhC--CCC
Confidence 999999999999999974 58999999999987666679999999998632 123344444321 148
Q ss_pred ccEEEEeCCcccCCCc----HHHHHHHHHhhhhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCC
Q 046241 370 VDSIFHIGDISYATGF----LVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPI 445 (638)
Q Consensus 370 pDfvl~~GDi~y~~g~----~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~ 445 (638)
|||||++||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.... . . ...+....|..+|.||.
T Consensus 155 ~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~-~---~----~~~~~~~~~~~~f~~p~ 226 (426)
T 1xzw_A 155 GQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAP-D---I----GEYQPFVPFTNRYPTPH 226 (426)
T ss_dssp CSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBG-G---G----TBCSTTHHHHHHSCCCC
T ss_pred CCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCC-c---c----ccccCChhheEEEeCCc
Confidence 9999999999998765 467999999999998899999999999985421 0 0 00123457888899996
Q ss_pred CC---CCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCC--CCCCHHHHHHH
Q 046241 446 PA---RDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLS--SSVDNKFVDAV 520 (638)
Q Consensus 446 ~~---~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~--~~~~~~~r~~l 520 (638)
++ .++.||+|++|+++||+||++.++..+.+|++||+++|+++++++++|+||++|+|+|+... ......+++.|
T Consensus 227 ~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l 306 (426)
T 1xzw_A 227 EASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIF 306 (426)
T ss_dssp GGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHH
T ss_pred ccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHH
Confidence 43 34689999999999999999987777899999999999998777899999999999997653 22345679999
Q ss_pred HHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCC-ccccCCCCCCCEEEEECCCCCccC---CCCCCCCCCc
Q 046241 521 EPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGI-DTYDHSNYSAPVQAVIGMAGFTLD---KFPDNADHTW 596 (638)
Q Consensus 521 ~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~-~~y~~~~~~gpv~iv~G~aG~~~~---~~~~~~~~~w 596 (638)
+++|.+++||++|+||+|.|+|++|++++++.. .+|. ..|. ++++|+||++|+||+... .+..+ +++|
T Consensus 307 ~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~-----~~g~~~~~~--~~~g~~yi~~G~gG~~~~~~~~~~~~-~p~~ 378 (426)
T 1xzw_A 307 EPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI-----VNAKCTPVS--DESAPVYITIGDGGNSEGLASEMTQP-QPSY 378 (426)
T ss_dssp HHHHHHTTCSEEEECSSSSEEEECSEECCCCCS-----TTCCCCCEE--CTTSCEEEEECCSCCTTCCCCCBCSS-CCTT
T ss_pred HHHHHHhCCCEEEEcChhhheeeeeecCccccc-----cCCcccccc--CCCccEEEEeCCCccccccccccCCC-CCCc
Confidence 999999999999999999999999999876421 1221 1222 357899999999998532 33333 7889
Q ss_pred ceeeeccccEEEEEE-eCCEEEEEEEEcCCCc--EEEEEEEEec
Q 046241 597 SLIRISKFGYLRGNA-NKEEMKFEFVNSDTRE--VEDSFRIIKA 637 (638)
Q Consensus 597 s~~~~~~~Gy~~v~v-~~~~L~~~~~~~~dG~--v~D~f~I~k~ 637 (638)
+.++...+||++|++ ++++|.++|+.+.+|+ |+|+|+|.|.
T Consensus 379 s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 379 SAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422 (426)
T ss_dssp EEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECS
T ss_pred eeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEec
Confidence 999999999999999 7889999999888998 8999999986
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-57 Score=500.08 Aligned_cols=385 Identities=25% Similarity=0.405 Sum_probs=296.1
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCC-CCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDK-EPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~-~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
+++.|+|+||++++++.++|+|+|+|.+. ..+.|+||+........ ... .+. .+ ...-..++++|+|+
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~--~~g--~~~--~~-----~~~~~~~~~~~~v~ 83 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI--AKG--KMS--TY-----RFFNYSSGFIHHTT 83 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEE--ECC--EEE--CC-----BCSSCBCCEEEEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceE--EEE--EEE--EE-----EecCCCCCEEEEEE
Confidence 45689999999999878999999999764 57899999865432211 000 000 00 00012468999999
Q ss_pred EcCCCCCcEEEEEEeeCCCCcceeeEEECCCCCCCCccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCc
Q 046241 291 MTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSV 370 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~~~~~S~~~sF~T~p~~~~~~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p 370 (638)
|+||+|||+|+|||+.+ +||+.++|+|+|.+++..++||+++||+|... +...+++.+.+ ...++
T Consensus 84 l~gL~p~t~Y~Yrv~~~--~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~-----------~~~~~l~~~~~--~~~~~ 148 (424)
T 2qfp_A 84 IRKLKYNTKYYYEVGLR--NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF-----------DSNTTLSHYEL--SPKKG 148 (424)
T ss_dssp ECSCCTTCEEEEEECCS--SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH-----------HHHHHHHHHHT--CSSCC
T ss_pred ECCCCCCCEEEEEECCC--CccceEEEECCCCCCCCCCeEEEEEEeCCCCC-----------ChHHHHHHHHh--CCCCC
Confidence 99999999999999986 58999999999987666679999999999642 11223333321 11389
Q ss_pred cEEEEeCCcccCCCc----HHHHHHHHHhhhhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCC
Q 046241 371 DSIFHIGDISYATGF----LVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP 446 (638)
Q Consensus 371 Dfvl~~GDi~y~~g~----~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~ 446 (638)
||||++||++|+.+. ..+|+.|.+.++++.+.+|+|+++||||+.+....+ .......|..+|.||..
T Consensus 149 D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~--------~~~~~~~~~~~f~~P~~ 220 (424)
T 2qfp_A 149 QTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEIN--------ETEPFKPFSYRYHVPYE 220 (424)
T ss_dssp CEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGGGT--------BCSTTHHHHHHCCCCGG
T ss_pred CEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCccc--------ccccchhhhhhccCCcc
Confidence 999999999998653 357999999999888889999999999985421000 00123567888999864
Q ss_pred C---CCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCC--CCCHHHHHHHH
Q 046241 447 A---RDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSS--SVDNKFVDAVE 521 (638)
Q Consensus 447 ~---~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~--~~~~~~r~~l~ 521 (638)
+ .++.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+++.... .....+++.|+
T Consensus 221 ~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~ 300 (424)
T 2qfp_A 221 ASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFE 300 (424)
T ss_dssp GGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHH
T ss_pred ccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHH
Confidence 2 356899999999999999998777667799999999999987777899999999999976432 23456789999
Q ss_pred HHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccC---CCCCCCCCCcce
Q 046241 522 PLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLD---KFPDNADHTWSL 598 (638)
Q Consensus 522 ~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~---~~~~~~~~~ws~ 598 (638)
++|++++||++|+||+|.|+|++|+++.+....+.. ...| .++.+|+||++|+||+... .+..+ +|+|+.
T Consensus 301 ~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~----~~~~--~~~~~~vyi~~G~gg~~~~~~~~~~~~-~p~~s~ 373 (424)
T 2qfp_A 301 AWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGL----CTPV--KDQSAPVYITIGDAGNYGVIDSNMIQP-QPEYSA 373 (424)
T ss_dssp HHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCC----CSCE--ECTTSCEEEEECCSCTTSCCCCCBCSS-CCTTEE
T ss_pred HHHHHhCCcEEEECChhhhheeccccCcceeccCCc----cccc--cCCCCcEEEEecCCCCccccCccCCCC-CCCcce
Confidence 999999999999999999999999987553221110 0112 2457899999999998632 23333 688999
Q ss_pred eeeccccEEEEEE-eCCEEEEEEEEcCCCcE--EEEEEEEec
Q 046241 599 IRISKFGYLRGNA-NKEEMKFEFVNSDTREV--EDSFRIIKA 637 (638)
Q Consensus 599 ~~~~~~Gy~~v~v-~~~~L~~~~~~~~dG~v--~D~f~I~k~ 637 (638)
++...+||++|++ +++++.++|+.+.+|++ .|+|+|.|.
T Consensus 374 ~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~ 415 (424)
T 2qfp_A 374 FREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNR 415 (424)
T ss_dssp EEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECT
T ss_pred EEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEec
Confidence 9999999999999 88899999999899997 599999986
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=325.40 Aligned_cols=355 Identities=18% Similarity=0.219 Sum_probs=228.7
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCC----------CCcEEEEcCC--CCccceeeEeecCCcccccccCCCCCCcCccC
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDK----------EPQQVQYGDG--KSETSKVTTFTQDDMCNATALQSPAKDFGWHD 282 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~----------~~~~V~yg~~--~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~ 282 (638)
.|....++.|+...+++ |.|+.-.+ ....|+|... +.....+..-+ ....| +
T Consensus 7 ~~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~--------~~a~~-------~ 70 (527)
T 2yeq_A 7 YPFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGT--------EMAKP-------S 70 (527)
T ss_dssp CSCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEE--------EEECG-------G
T ss_pred CCccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeee--------EEecC-------C
Confidence 46667788888777776 77998754 2345666432 22111111000 11112 2
Q ss_pred CceEEEEEEcCCCCCcEEEEEEeeCCCCcceeeEEECCCCCCCC-ccEEEEEEecCCCCCCCCCcccccCCChHHHHHHH
Q 046241 283 PGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPPAGGSS-EVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAM 361 (638)
Q Consensus 283 ~g~~h~a~l~gL~P~T~Y~Yrvg~~~~~~S~~~sF~T~p~~~~~-~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l 361 (638)
.+++|++.|+||+|+|+|+|||+.++ .+|++++|+|+|.+++. .++||+++||.+... +...+++.|
T Consensus 71 ~~~t~~v~v~gL~P~t~Y~Yr~~~~~-~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~-----------g~~~~~~~i 138 (527)
T 2yeq_A 71 LAHSVHVEADGLEPNKVYYYRFKTGH-ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH-----------GYYTAYKHM 138 (527)
T ss_dssp GTTEEEEEECSCCTTCEEEEEEEETT-EECCCEEEECCCCTTCCCCCEEEEEECCCCGGG-----------CCCHHHHHH
T ss_pred CceEEEeecCCcCCCCEEEEEEEeCC-CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC-----------CccHHHHHH
Confidence 36899999999999999999999865 58999999999987543 459999999988531 122445554
Q ss_pred HHHhhCCCccEEEEeCCcccCCCcH--------------------HH----HHHHH--HhhhhhccCcceEEecCCCccC
Q 046241 362 ADEVDNGSVDSIFHIGDISYATGFL--------------------VE----WDFFL--HQISPVASRVSYMTAIGNHERD 415 (638)
Q Consensus 362 ~~~i~~~~pDfvl~~GDi~y~~g~~--------------------~~----wd~f~--~~l~~l~~~vP~~~v~GNHD~~ 415 (638)
.+.+||||||+||++|+++.. .+ |..++ ..++.+.+.+|+|+++||||+.
T Consensus 139 ----a~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~ 214 (527)
T 2yeq_A 139 ----AKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVE 214 (527)
T ss_dssp ----TTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTS
T ss_pred ----HhcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEeccccccc
Confidence 446899999999999987532 12 22222 2356777899999999999996
Q ss_pred CCCCCCCcccCCCCCCc----cchhccccc-cCCCC-------CCCCCeEEEEECC-EEEEEEeCCCCCC----------
Q 046241 416 YLGSSGSVYESPDSGGE----CGVAYETYF-PMPIP-------ARDKPWYSIEQAG-VHFTVMSTEHDWS---------- 472 (638)
Q Consensus 416 ~~~~sgs~y~~~ds~ge----~~~~y~~~f-~~P~~-------~~~~~yYsfd~G~-v~fi~LDT~~~~~---------- 472 (638)
.+. .+.........+. ...+++.+| .||.. .....||+|++|+ ++|++|||+....
T Consensus 215 nn~-~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~ 293 (527)
T 2yeq_A 215 NNY-ANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKP 293 (527)
T ss_dssp TTC-BTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEEC
T ss_pred CCC-CCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccccccccccccccc
Confidence 443 2111100000000 001233333 23322 2346899999999 9999999975321
Q ss_pred ------------CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCC------------CCCHHHHHHHHHHHHhCC
Q 046241 473 ------------ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSS------------SVDNKFVDAVEPLLLDNK 528 (638)
Q Consensus 473 ------------~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~------------~~~~~~r~~l~~Ll~k~~ 528 (638)
.+.+|++||+++|++ ++++|+||++|+|++..... ......|+.|+++|.+++
T Consensus 294 ~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~ 370 (527)
T 2yeq_A 294 PSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKN 370 (527)
T ss_dssp CCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTT
T ss_pred ccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhC
Confidence 378999999999997 56899999999999875421 123567999999999999
Q ss_pred C--eEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCC---EEEEE-CC--C--CCccCCCCC--CCCCCc
Q 046241 529 V--DLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAP---VQAVI-GM--A--GFTLDKFPD--NADHTW 596 (638)
Q Consensus 529 V--dlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gp---v~iv~-G~--a--G~~~~~~~~--~~~~~w 596 (638)
| +++|+||+|.++++....+.. ++.++ +.+++ +. + |........ ....++
T Consensus 371 v~n~vvLsGDvH~~~~~~~~~~~~------------------~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~ 432 (527)
T 2yeq_A 371 LNNVVVLTGDVHASWASNLHVDFE------------------KTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENPH 432 (527)
T ss_dssp CCCEEEEECSSSSEEEEEEESSTT------------------CTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTT
T ss_pred CCCEEEEEcchHHHhHhhcccccc------------------CCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCCc
Confidence 8 499999999999986421110 11111 22332 21 1 111100000 001122
Q ss_pred ceeeeccccEEEEEEeCCEEEEEEEEc
Q 046241 597 SLIRISKFGYLRGNANKEEMKFEFVNS 623 (638)
Q Consensus 597 s~~~~~~~Gy~~v~v~~~~L~~~~~~~ 623 (638)
..+.....||++|++++++++++|+..
T Consensus 433 ~~~~~~~~Gy~~v~vt~~~~~~~~~~v 459 (527)
T 2yeq_A 433 IQFFNDYRGYVRCTVTPHQWKADYRVM 459 (527)
T ss_dssp EEEEEBCEEEEEEEEETTEEEEEEEEE
T ss_pred ceeeeCCCCEEEEEEeccEEEEEEEEe
Confidence 233446899999999999999999874
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=317.18 Aligned_cols=262 Identities=21% Similarity=0.236 Sum_probs=193.8
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc----HHHHHHHHH-hhhhh--cc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF----LVEWDFFLH-QISPV--AS 401 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~----~~~wd~f~~-~l~~l--~~ 401 (638)
+||+++||+|.+. +.+..+.++|.+.+++.+|||||++||++|. |. ..+|.+.++ .++.+ ..
T Consensus 4 l~f~~igD~g~g~----------~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~ 72 (342)
T 3tgh_A 4 LRFASLGDWGKDT----------KGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDM 72 (342)
T ss_dssp EEEEECCSCBSCC----------HHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTT
T ss_pred EEEEEEecCCCCC----------chHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhh
Confidence 9999999999742 1246778888888888999999999999998 54 345654333 33332 35
Q ss_pred CcceEEecCCCccCCCCCCCCcc-----cCCC----CCCccchhccccccCCCCCCCCCeEEE----EE---------C-
Q 046241 402 RVSYMTAIGNHERDYLGSSGSVY-----ESPD----SGGECGVAYETYFPMPIPARDKPWYSI----EQ---------A- 458 (638)
Q Consensus 402 ~vP~~~v~GNHD~~~~~~sgs~y-----~~~d----s~ge~~~~y~~~f~~P~~~~~~~yYsf----d~---------G- 458 (638)
.+|+++++||||+..+....-.| ...+ ...........+|.||. .||++ .. |
T Consensus 73 ~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~g~ 147 (342)
T 3tgh_A 73 YMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKTGH 147 (342)
T ss_dssp CSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC---------C
T ss_pred CCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeeccccccccccCC
Confidence 79999999999985321000000 0000 00000012345678884 57765 32 3
Q ss_pred ---CEEEEEEeCCCCCC----------CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHH
Q 046241 459 ---GVHFTVMSTEHDWS----------ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLL 525 (638)
Q Consensus 459 ---~v~fi~LDT~~~~~----------~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~ 525 (638)
.++||+|||..... ...+|++||+++|+. ++|+||++|||+|+...+.....+++.|++||+
T Consensus 148 ~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~~~~~~l~~~l~~ll~ 222 (342)
T 3tgh_A 148 KDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYSRGSSYLAYYLLPLLK 222 (342)
T ss_dssp EEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTTCCCHHHHHHTHHHHH
T ss_pred CCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCCCCcHHHHHHHHHHHH
Confidence 39999999974321 135899999999943 589999999999998766666788999999999
Q ss_pred hCCCeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeecccc
Q 046241 526 DNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFG 605 (638)
Q Consensus 526 k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~G 605 (638)
+|+||++|+||+|.|+|.++ .+++||++|++|....... . .++|+.++...+|
T Consensus 223 ~~~VdlvlsGH~H~~~~~~~-------------------------~g~~~iv~Ga~g~~~~~~~-~-~~~~s~f~~~~~G 275 (342)
T 3tgh_A 223 DAEVDLYISGHDNNMEVIED-------------------------NDMAHITCGSGSMSQGKSG-M-KNSKSLFFSSDIG 275 (342)
T ss_dssp HTTCCEEEECSSSSEEEEEE-------------------------TTEEEEEECCSSCCCCCCS-S-CCTTEEEEECSSE
T ss_pred HcCCCEEEECCCcceeEEee-------------------------CCcEEEEeCccccccccCC-C-CCCcceeecCCCc
Confidence 99999999999999999863 2478999999987654322 2 4678988889999
Q ss_pred EEEEEEeCCEEEEEEEEcCCCcEEEEEEEEecC
Q 046241 606 YLRGNANKEEMKFEFVNSDTREVEDSFRIIKAK 638 (638)
Q Consensus 606 y~~v~v~~~~L~~~~~~~~dG~v~D~f~I~k~~ 638 (638)
|.++++++++|+++|+.+.+|+++|+|+|.|++
T Consensus 276 f~~l~v~~~~l~~~~~~~~~G~vld~~~i~k~~ 308 (342)
T 3tgh_A 276 FCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKK 308 (342)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEECCC
T ss_pred EEEEEEECCEEEEEEEECCCCcEEEEEEEECCC
Confidence 999999999999999986799999999999863
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-31 Score=273.72 Aligned_cols=261 Identities=23% Similarity=0.333 Sum_probs=182.8
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHH-HHHHhhhhhc----c-
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWD-FFLHQISPVA----S- 401 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd-~f~~~l~~l~----~- 401 (638)
++||+++||+|...... +.......+.++|.+.+++.+|||||++||++|..|....++ +|.+.++.+. .
T Consensus 6 ~~~~~~isD~h~~~~~~----~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 81 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAP----FHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLR 81 (313)
T ss_dssp CEEEEEECSCCCCSSTT----SSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGT
T ss_pred ceEEEEEcccCCCCCcc----ccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhc
Confidence 39999999999865321 111122345566665566679999999999998754322111 3333333322 2
Q ss_pred CcceEEecCCCccCCCCCCCCcccCCCCCCccchhc---cccccCCCCCCCCCeEEEEE------CCEEEEEEeCCCC--
Q 046241 402 RVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAY---ETYFPMPIPARDKPWYSIEQ------AGVHFTVMSTEHD-- 470 (638)
Q Consensus 402 ~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y---~~~f~~P~~~~~~~yYsfd~------G~v~fi~LDT~~~-- 470 (638)
.+|+++++||||+.... . ....| ..+|.+| ..||++++ |+++||+||+...
T Consensus 82 ~~p~~~v~GNHD~~~~~-~------------~~~~~~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~ 143 (313)
T 1ute_A 82 NVPWHVLAGNHDHLGNV-S------------AQIAYSKISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCG 143 (313)
T ss_dssp TCCEEECCCHHHHHSCH-H------------HHHHGGGTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHC
T ss_pred CCCEEEECCCCccCCCc-c------------ccccccccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhC
Confidence 79999999999984321 0 00112 2334444 35889988 5899999998541
Q ss_pred ---------------CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 046241 471 ---------------WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFG 535 (638)
Q Consensus 471 ---------------~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsG 535 (638)
...+.+|++||++.|++. ..+|+|+++|+|++..........+++.|.++|.+++|+++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~l~~~l~~~~v~~~l~G 220 (313)
T 1ute_A 144 NSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCG 220 (313)
T ss_dssp CGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEEC
T ss_pred cCccccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCCCCcHHHHHHHHHHHHHcCCcEEEEC
Confidence 113579999999999985 35899999999999876655566778899999999999999999
Q ss_pred cccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCC--CCCCCcceeeec----cccEEEE
Q 046241 536 HVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPD--NADHTWSLIRIS----KFGYLRG 609 (638)
Q Consensus 536 H~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~--~~~~~ws~~~~~----~~Gy~~v 609 (638)
|+|.+++..+ ..++.||++|++|........ .....+..+... .+||.+|
T Consensus 221 H~H~~~~~~~------------------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l 276 (313)
T 1ute_A 221 HDHNLQYLQD------------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYV 276 (313)
T ss_dssp SSSSEEEEEC------------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEE
T ss_pred ChhhhhhccC------------------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEE
Confidence 9999998742 135789999998864221100 001234333332 3799999
Q ss_pred EEeCCEEEEEEEEcCCCcEEEEEEEEecC
Q 046241 610 NANKEEMKFEFVNSDTREVEDSFRIIKAK 638 (638)
Q Consensus 610 ~v~~~~L~~~~~~~~dG~v~D~f~I~k~~ 638 (638)
++++++++++++.. +|+++|+|+|.|++
T Consensus 277 ~v~~~~~~~~~~~~-~g~~~~~~~l~~~~ 304 (313)
T 1ute_A 277 EITPKEMSVTYIEA-SGKSLFKTKLPRRA 304 (313)
T ss_dssp EECSSCEEEEEEET-TSCEEEEEEECCCC
T ss_pred EEEcCEEEEEEEcC-CCcEEEEEEecccc
Confidence 99999999999985 99999999998863
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-23 Score=216.40 Aligned_cols=247 Identities=15% Similarity=0.144 Sum_probs=168.9
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC--CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhcc--Cc
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN--GSVDSIFHIGDISYATGFLVEWDFFLHQISPVAS--RV 403 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~--~v 403 (638)
.+||++++|+|....... .+........++++++.+.+ .++|+||++||+++. +...+|+.+.+.++++.. .+
T Consensus 25 ~~ri~~iSD~H~~~~~~~--~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~l~~~~~~ 101 (330)
T 3ib7_A 25 DYVLLHISDTHLIGGDRR--LYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK-GEPAAYRKLRGLVEPFAAQLGA 101 (330)
T ss_dssp SEEEEEECCCCBCSSSCC--BTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT-CCHHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEeCCccCCCCcc--cccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHHHHhhcCC
Confidence 499999999998654321 11111245667777777765 799999999999964 556778877777777643 78
Q ss_pred ceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCC----CCCcHHHHH
Q 046241 404 SYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHD----WSENSEQYE 479 (638)
Q Consensus 404 P~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~----~~~~~~Q~~ 479 (638)
|+++++||||+.. .+...+..........+|++++++++|++||+... .....+|++
T Consensus 102 pv~~v~GNHD~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~ 162 (330)
T 3ib7_A 102 ELVWVMGNHDDRA-------------------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 162 (330)
T ss_dssp EEEECCCTTSCHH-------------------HHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHH
T ss_pred CEEEeCCCCCCHH-------------------HHHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHH
Confidence 9999999999621 11111111111123568999999999999999753 235789999
Q ss_pred HHHHHhccccCCCCCeEEEEeccCCccCCCCCC---CHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCc
Q 046241 480 WMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSV---DNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPT 556 (638)
Q Consensus 480 WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~---~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~ 556 (638)
||++.|+... ....|+++|||++....... ....++.+.+++.+++|+++|+||+|..+... .
T Consensus 163 wl~~~l~~~~---~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~--~--------- 228 (330)
T 3ib7_A 163 WLAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--F--------- 228 (330)
T ss_dssp HHHHHTTSCC---TTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--E---------
T ss_pred HHHHHHHhcc---cCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce--E---------
Confidence 9999999853 23378889999876542211 11235788999999999999999999988532 1
Q ss_pred cCCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEcCCCc
Q 046241 557 KDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTRE 627 (638)
Q Consensus 557 ~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~ 627 (638)
++..+++.|+.+....... ............||..|+++++.+.++++....+.
T Consensus 229 --------------~g~~~~~~gs~~~~~~~~~---~~g~~~~~~~~~gy~iv~i~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 229 --------------VGIPVSVASATCYTQDLTV---AAGGTRGRDGAQGCNLVHVYPDTVVHSVIPLGGGE 282 (330)
T ss_dssp --------------TTEEEEECCCSSCEECTTS---CTTCCCEESCSCEEEEEEECSSCEEEEEEECSCCC
T ss_pred --------------CCEEEEecCcceeccCCCC---CCcceeccCCCCceEEEEEECCCeEEEEeccCCCC
Confidence 1345667777665332111 11112223345789999999999999999754433
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=209.33 Aligned_cols=237 Identities=16% Similarity=0.164 Sum_probs=156.2
Q ss_pred cEEEEEEecCCCCCCCCCccc-----ccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc-----HHHHHHHHHhhh
Q 046241 328 VLRFLTYGDMGKAPLDDSAEH-----YIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF-----LVEWDFFLHQIS 397 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~-----~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~-----~~~wd~f~~~l~ 397 (638)
++||++++|+|.......... .........++++++.+.+.+||+||++||+++.... ...|+.+.+.++
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l~ 84 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 84 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHHH
Confidence 499999999998764321000 0011123556666666666899999999999975321 234444555555
Q ss_pred hhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhcccccc-------------CCCCCCCCCeEEEEE-CCEEEE
Q 046241 398 PVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFP-------------MPIPARDKPWYSIEQ-AGVHFT 463 (638)
Q Consensus 398 ~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~-------------~P~~~~~~~yYsfd~-G~v~fi 463 (638)
.+ .+|+++++||||..... . ..+.+.+. +|. .+..||+|+. ++++||
T Consensus 85 ~~--~~p~~~v~GNHD~~~~~--~-------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~y~~~~~~~~~~i 145 (322)
T 2nxf_A 85 AC--SVDVHHVWGNHEFYNFS--R-------------PSLLSSRLNSAQRTGTDTGSDLIG--DDIYAYEFSPAPNFRFV 145 (322)
T ss_dssp TT--CSEEEECCCHHHHHHCC--H-------------HHHHTSTTCCCC------CEECGG--GTCCCEEEEEETTEEEE
T ss_pred hc--CCcEEEecCCCCcccCC--H-------------HHHhhhhCCcccccccccccccCC--CCceEEEEecCCCEEEE
Confidence 43 68999999999983111 0 01111111 232 2456899998 999999
Q ss_pred EEeCCCC----------------------------------------------CCCcHHHHHHHHHHhccccCCCCCeEE
Q 046241 464 VMSTEHD----------------------------------------------WSENSEQYEWMKKDMASVDRSKTPWLI 497 (638)
Q Consensus 464 ~LDT~~~----------------------------------------------~~~~~~Q~~WL~~~La~~~r~~~~w~I 497 (638)
+||+... .....+|++||++.|+++.+ ...++|
T Consensus 146 ~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~i 224 (322)
T 2nxf_A 146 LLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVL 224 (322)
T ss_dssp ECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEE
T ss_pred EEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEE
Confidence 9998641 11248999999999998642 234689
Q ss_pred EEeccCCccCCCCCC-CHHHHHHHHHHHHhC-CCeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEE
Q 046241 498 FSGHRPMYSSLSSSV-DNKFVDAVEPLLLDN-KVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQ 575 (638)
Q Consensus 498 V~~H~P~yss~~~~~-~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~ 575 (638)
|++|+|++....... ....++.+.+++.++ +|+++|+||+|.+++... ..+..+
T Consensus 225 v~~H~p~~~~~~~~~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~------------------------~~g~~~ 280 (322)
T 2nxf_A 225 IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD------------------------SSGAQH 280 (322)
T ss_dssp EEESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC------------------------TTSCEE
T ss_pred EEEccCCCCCCCCccccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec------------------------cCCceE
Confidence 999999986653210 111357889999999 799999999999998531 023456
Q ss_pred EEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEc
Q 046241 576 AVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNS 623 (638)
Q Consensus 576 iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~ 623 (638)
++.|+.- .. + ....||..++++++.++++.+..
T Consensus 281 i~~~~~~---~~-~-----------~~~~~y~~v~~~~~~~~~~~~~~ 313 (322)
T 2nxf_A 281 ITLEGVI---ET-P-----------PHSHAFATAYLYEDRMVMKGRGR 313 (322)
T ss_dssp EECCCGG---GC-C-----------TTSCEEEEEEECSSEEEEEEEET
T ss_pred EEecchh---hC-C-----------CCCCcEEEEEEECCeEEEEeccc
Confidence 6665541 11 1 12458999999999999998864
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=200.01 Aligned_cols=241 Identities=11% Similarity=0.041 Sum_probs=159.9
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC--CccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG--SVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~ 406 (638)
+||++++|+|........ +........++++++.+++. ++|+||++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 mri~~iSD~H~~~~~~~~--~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~l--~~p~~ 75 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKL--YGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC-GRPEEYQVARQILGSL--NYPLY 75 (274)
T ss_dssp CEEEEECCCCBCSTTCCB--TTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS-CCHHHHHHHHHHHTTC--SSCEE
T ss_pred CEEEEEecCCcCCCCccc--ccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhc--CCCEE
Confidence 589999999987532110 00012345677777777653 68999999999964 4566777777777765 68999
Q ss_pred EecCCCccCCCCCCCCcccCCCCCCccchhcccc-ccCCCCCCCCCeEEEEECCEEEEEEeCCCC----CCCcHHHHHHH
Q 046241 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYETY-FPMPIPARDKPWYSIEQAGVHFTVMSTEHD----WSENSEQYEWM 481 (638)
Q Consensus 407 ~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~-f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~----~~~~~~Q~~WL 481 (638)
+++||||..... ...+... +..+.+ .+..+|+++.++++|++||+... .....+|++||
T Consensus 76 ~v~GNHD~~~~~---------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl 139 (274)
T 3d03_A 76 LIPGNHDDKALF---------------LEYLQPLCPQLGSD-ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWL 139 (274)
T ss_dssp EECCTTSCHHHH---------------HHHHGGGSGGGCSC-GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHH
T ss_pred EECCCCCCHHHH---------------HHHhhhhhcCcccC-CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHH
Confidence 999999973110 0111111 111211 02357899999999999999753 23578999999
Q ss_pred HHHhccccCCCCCeEEEEeccCCccCCCCCCC---HHHHHHHHHHHHhC-CCeEEEEccccccceecccccCccccCCcc
Q 046241 482 KKDMASVDRSKTPWLIFSGHRPMYSSLSSSVD---NKFVDAVEPLLLDN-KVDLALFGHVHNYERTCSVYKQSCLAMPTK 557 (638)
Q Consensus 482 ~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~---~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~ 557 (638)
++.|++. +..++|+++|+|++.......+ ....+.+.++++++ +|+++|+||+|..+... +
T Consensus 140 ~~~l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--~---------- 204 (274)
T 3d03_A 140 EAQLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--Y---------- 204 (274)
T ss_dssp HHHHHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE--E----------
T ss_pred HHHHHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe--E----------
Confidence 9999974 3467899999999875432211 12356788999999 89999999999987642 1
Q ss_pred CCCCCccccCCCCCCCEEEEECCC-CCccCCCCCCCCCCc-ceeeeccccEEEEEEeCCEEEEEEEEc
Q 046241 558 DANGIDTYDHSNYSAPVQAVIGMA-GFTLDKFPDNADHTW-SLIRISKFGYLRGNANKEEMKFEFVNS 623 (638)
Q Consensus 558 d~~G~~~y~~~~~~gpv~iv~G~a-G~~~~~~~~~~~~~w-s~~~~~~~Gy~~v~v~~~~L~~~~~~~ 623 (638)
.+..++++++. +..... ...+ +.......||..+++++++++++++..
T Consensus 205 -------------~g~~~~~~pg~~~~~~~~-----~~~~~~~~~~~~~gy~i~~i~~~~~~~~~~~~ 254 (274)
T 3d03_A 205 -------------RQALISTLPGTVHQVPYC-----HADTDPYYDLSPASCLMHRQVGEQWVSYQHSL 254 (274)
T ss_dssp -------------TTEEEEECCCSSCBCCCC-----SSCCSCEEBCCCCEEEEEEEETTEEEEEEEEC
T ss_pred -------------CCEEEEEcCCcceeeccC-----CCccccccccCCCceEEEEEeCCcEEEEEEec
Confidence 12224444433 332111 1111 123345689999999999999999875
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-18 Score=186.69 Aligned_cols=213 Identities=14% Similarity=0.148 Sum_probs=134.7
Q ss_pred ccEEEEEEecCCCCCCCCCc--c----------cccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHH
Q 046241 327 EVLRFLTYGDMGKAPLDDSA--E----------HYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLH 394 (638)
Q Consensus 327 ~~~rf~v~GD~g~~~~~~~~--~----------~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~ 394 (638)
.++||++++|+|........ . ..........++++++.+.+.+||+||++||+++. +...+++.+.+
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~ 116 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN-GEKTSHEELAK 116 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS-CCHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHHH
Confidence 34999999999986421000 0 00000125567778777777889999999999964 44556776666
Q ss_pred hhhhhc-cCcceEEecCCCccCCCCCCCCcccCCC---CCCccchhccccccCCCC------C-CCCCeEEEEECCEEEE
Q 046241 395 QISPVA-SRVSYMTAIGNHERDYLGSSGSVYESPD---SGGECGVAYETYFPMPIP------A-RDKPWYSIEQAGVHFT 463 (638)
Q Consensus 395 ~l~~l~-~~vP~~~v~GNHD~~~~~~sgs~y~~~d---s~ge~~~~y~~~f~~P~~------~-~~~~yYsfd~G~v~fi 463 (638)
.++.+. ..+|+++++||||..... .. .+.... ........|.+.|..... . ....|+.+..++++|+
T Consensus 117 ~l~~l~~~~~~~~~v~GNHD~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 117 KLTQVEKNGTQVFVVPGNHDINNPW-AR-KFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHTTCEEEEECCTTTSSCTT-CE-EEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHhCCCeEEEECCcCCCCCcc-cc-ccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 666654 268999999999985322 10 000000 000001223333321110 0 1123444568999999
Q ss_pred EEeCCCC------------CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCC---CCHHHHHHHHHHHHhCC
Q 046241 464 VMSTEHD------------WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSS---VDNKFVDAVEPLLLDNK 528 (638)
Q Consensus 464 ~LDT~~~------------~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~---~~~~~r~~l~~Ll~k~~ 528 (638)
+||+... .....+|++||++.|+++.. +...+|+++|+|++...... .....++.+.+++++++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~ 273 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGA 273 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTT
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcC
Confidence 9999742 23468999999999987643 23468999999997653211 11123678899999999
Q ss_pred CeEEEEcccccccee
Q 046241 529 VDLALFGHVHNYERT 543 (638)
Q Consensus 529 VdlvlsGH~H~YeRt 543 (638)
|+++|+||+|.....
T Consensus 274 v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 274 MDFSLSGHIHTQNIR 288 (443)
T ss_dssp CCEEEECSSCSCEEE
T ss_pred CeEEEECCcccCchh
Confidence 999999999998754
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.1e-13 Score=136.58 Aligned_cols=174 Identities=13% Similarity=0.029 Sum_probs=104.1
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
.+||+++||+|.. ...++++.+.+.+.++|+|+++||+++......++..+++.++.+ ..|+++
T Consensus 5 ~mri~~iSD~H~~--------------~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~ 68 (228)
T 1uf3_A 5 VRYILATSNPMGD--------------LEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CCEEEEEECCTTC--------------HHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred eEEEEEEeeccCC--------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEE
Confidence 3899999999964 234566666665568999999999996543455566666666543 579999
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCC-CCCCeEEEEEC-CEEEEEEeCCC--CCCCc--------H
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPA-RDKPWYSIEQA-GVHFTVMSTEH--DWSEN--------S 475 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~-~~~~yYsfd~G-~v~fi~LDT~~--~~~~~--------~ 475 (638)
++||||..... . ....+......|... ..+ ..+.++ +++|+.++... .+... .
T Consensus 69 v~GNHD~~~~~----~---------~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 133 (228)
T 1uf3_A 69 VPGPQDAPIWE----Y---------LREAANVELVHPEMRNVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 133 (228)
T ss_dssp ECCTTSCSHHH----H---------HHHHHHHHHHCTTEEECBT--SEEEETTTEEEEEECSEEESSSCCBSSSSCEEEH
T ss_pred ECCCCCchhHH----H---------HHhhhhhhccCcceEEccc--ceEeeCCCcEEecCCCCcCCCCccChhhcccchh
Confidence 99999973100 0 000000000001000 001 134556 88898887421 11111 2
Q ss_pred HHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEcccc
Q 046241 476 EQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVH 538 (638)
Q Consensus 476 ~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H 538 (638)
.+.+|+++.|++.. ..+.|++.|+|++........ .+.+.+++.++++|++++||+|
T Consensus 134 ~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 134 WVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQG---SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp HHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTTS---BHHHHHHHHHHCCSEEEECCSS
T ss_pred hhHHHHHHHHHhCC---CCCeEEEEccCcccCCccccC---HHHHHHHHHHhCCCEEEEcccc
Confidence 23345566666532 236899999999764211111 2356677888899999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-13 Score=139.50 Aligned_cols=179 Identities=11% Similarity=0.052 Sum_probs=97.0
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHH----------------H--
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVE----------------W-- 389 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~----------------w-- 389 (638)
++||+++||+|... ..++++++.+...++|+||++||+++.. .... +
T Consensus 5 ~mri~~iSDlH~~~--------------~~~~~~l~~~~~~~~D~vi~~GDl~~~~-~~~~~~~~~~~~~~~p~~~~~~~ 69 (260)
T 2yvt_A 5 PRKVLAIKNFKERF--------------DLLPKLKGVIAEKQPDILVVVGNILKNE-ALEKEYERAHLARREPNRKVIHE 69 (260)
T ss_dssp CCEEEEEECCTTCG--------------GGHHHHHHHHHHHCCSEEEEESCCCCCH-HHHHHHHHHHHTTCCCCTHHHHH
T ss_pred eEEEEEEeecCCCh--------------HHHHHHHHHHHhcCCCEEEECCCCCCcc-CcchhhhhhhhhhcccchhhhhH
Confidence 38999999999752 1245555555556899999999999543 2200 0
Q ss_pred ------HHHHHhhhhhcc-CcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEE
Q 046241 390 ------DFFLHQISPVAS-RVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHF 462 (638)
Q Consensus 390 ------d~f~~~l~~l~~-~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~f 462 (638)
+.+.+.++.+.. ..|+++++||||..... .....+...-..|....-..-..+++++++|
T Consensus 70 ~~~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i 136 (260)
T 2yvt_A 70 NEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKI-------------FLRAAYEAETAYPNIRVLHEGFAGWRGEFEV 136 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHH-------------HHHHHHHTTTTCTTEEECSSEEEEETTTEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhh-------------hHHHHhhhccCCcceEEecCcceEEECCEEE
Confidence 222233333332 58999999999963100 0000010000000000000111367889999
Q ss_pred EEEeCCCCC-CCcHHHH---------HHHHHHhccccCCCCCeEEEEeccCCccCCCC----CCCHHHHHHHHHHHHhCC
Q 046241 463 TVMSTEHDW-SENSEQY---------EWMKKDMASVDRSKTPWLIFSGHRPMYSSLSS----SVDNKFVDAVEPLLLDNK 528 (638)
Q Consensus 463 i~LDT~~~~-~~~~~Q~---------~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~----~~~~~~r~~l~~Ll~k~~ 528 (638)
+.++..... ....+|+ +|| +.|++.. + ...|++.|+|++..... .......+.+.+++.+++
T Consensus 137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~ 212 (260)
T 2yvt_A 137 IGFGGLLTEHEFEEDFVLKYPRWYVEYIL-KFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLN 212 (260)
T ss_dssp EEECSEEESSCCBSSSSCEEEHHHHHHHG-GGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHC
T ss_pred EecCCCcCCCCcCHHHHhhcchhhHHHHH-HHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhC
Confidence 999753210 1111222 344 3444321 2 34688899998753110 000111245677788889
Q ss_pred CeEEEEcccc
Q 046241 529 VDLALFGHVH 538 (638)
Q Consensus 529 VdlvlsGH~H 538 (638)
++++++||+|
T Consensus 213 ~~~vl~GH~H 222 (260)
T 2yvt_A 213 PEVAIVGHVG 222 (260)
T ss_dssp CSEEEECSSC
T ss_pred CCEEEECCcc
Confidence 9999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.7e-13 Score=144.84 Aligned_cols=252 Identities=13% Similarity=0.098 Sum_probs=131.7
Q ss_pred cEEEEEEecCCCCC----CCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCC-cccCCCcH--HHHHHHHHhhhhhc
Q 046241 328 VLRFLTYGDMGKAP----LDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGD-ISYATGFL--VEWDFFLHQISPVA 400 (638)
Q Consensus 328 ~~rf~v~GD~g~~~----~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GD-i~y~~g~~--~~wd~f~~~l~~l~ 400 (638)
.+||++++|+|.+. ...... ........++++++.+.+.++|+||++|| +++ .+.. ...+.+.+.++.+.
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~--r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d-~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVD--RREELKKALDKVVEEAEKREVDLILLTGDLLHS-RNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEE--CHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSC-SSCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEECcccCCCCccccccCcC--hhHHHHHHHHHHHHHHHHhCCCEEEECCccccC-CCCCCHHHHHHHHHHHHHHH
Confidence 49999999999762 111000 00113567788888888889999999999 664 3332 22445555666554
Q ss_pred cCcceEEecCCCccCCCCCCCCcccCCCCCCccchhcccc----ccCCCCCCCCCeEEEEECCEEEEEEeCCCCC-----
Q 046241 401 SRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETY----FPMPIPARDKPWYSIEQAGVHFTVMSTEHDW----- 471 (638)
Q Consensus 401 ~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~----f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~----- 471 (638)
..+|+++++||||... . +....+... +.+-.+......+.++.+++.|+.++.....
T Consensus 95 ~~~pv~~i~GNHD~~~-~-------------~~~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~ 160 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKG-L-------------KLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRK 160 (336)
T ss_dssp HHSCEEECCC-------C-------------HHHHHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------C
T ss_pred hcCCEEEECCCCCccc-c-------------ccHHHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHH
Confidence 3389999999999743 1 000111110 1111100000001122356888888643221
Q ss_pred --CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHH-HHHHHHHHHhCCCeEEEEccccccceeccccc
Q 046241 472 --SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKF-VDAVEPLLLDNKVDLALFGHVHNYERTCSVYK 548 (638)
Q Consensus 472 --~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~-r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~ 548 (638)
....+|++|+.+.|...-+....+.|+++|.|++..........+ ...+...+.+.++|++++||.|..+... .
T Consensus 161 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~---~ 237 (336)
T 2q8u_A 161 NEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQ---K 237 (336)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESCSSCEEEE---E
T ss_pred hhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCCCccchhhcccCHHHccccCCEEEEccccCceEeC---C
Confidence 123567889988886421023468899999998743211100000 0011122345689999999999988642 0
Q ss_pred CccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCC-EEEEEEEEcCCCc
Q 046241 549 QSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKE-EMKFEFVNSDTRE 627 (638)
Q Consensus 549 ~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~-~L~~~~~~~~dG~ 627 (638)
.+..+-.|+... .+++.. ....||..|+++++ .+.++++.... +
T Consensus 238 -----------------------~~~i~y~GS~~~----------~s~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~-r 282 (336)
T 2q8u_A 238 -----------------------QPLTIYPGSLIR----------IDFGEE-ADEKGAVFVELKRGEPPRYERIDASP-L 282 (336)
T ss_dssp -----------------------TTEEEECCCSSC----------CSGGGT-TCCCEEEEEEEETTSCCEEEEEECCC-C
T ss_pred -----------------------CccEEECCCCcC----------CCcccc-CCCCEEEEEEEeCCCccEEEEEECCC-E
Confidence 011122333211 111110 12468999999865 58899987644 5
Q ss_pred EEEEEEE
Q 046241 628 VEDSFRI 634 (638)
Q Consensus 628 v~D~f~I 634 (638)
.+-.+.+
T Consensus 283 ~~~~~~~ 289 (336)
T 2q8u_A 283 PLKTLYY 289 (336)
T ss_dssp CEEEEEE
T ss_pred EEEEeec
Confidence 5555443
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.37 E-value=7.1e-11 Score=114.65 Aligned_cols=182 Identities=13% Similarity=0.078 Sum_probs=112.0
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
.+||+++||+|....... ..+.+.+.+++.++|+|+++||++. . ...+.++.+ ..|++.
T Consensus 10 mm~i~~iSD~H~~~~~~~-----------~~~~l~~~~~~~~~d~ii~~GDl~~----~----~~~~~l~~~--~~~~~~ 68 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNS-----------LPAKFKKLLVPGKIQHILCTGNLCT----K----ESYDYLKTL--AGDVHI 68 (192)
T ss_dssp -CEEEEECCCCBTTTCSS-----------CCHHHHTTCCTTSCSEEEECSCCBS----H----HHHHHHHHH--CSEEEE
T ss_pred ceEEEEEecCCCCccchh-----------HHHHHHHHhccCCCCEEEEcCCCCC----H----HHHHHHHhc--CCCEEE
Confidence 389999999997532110 1133444444568999999999984 1 223334433 358999
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhcc
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMAS 487 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~ 487 (638)
++||||... .+|. ...++.
T Consensus 69 v~GNhD~~~-------------------------~lp~------~~~~~~------------------------------ 87 (192)
T 1z2w_A 69 VRGDFDENL-------------------------NYPE------QKVVTV------------------------------ 87 (192)
T ss_dssp CCCTTCCCT-------------------------TSCS------EEEEEE------------------------------
T ss_pred EcCCcCccc-------------------------cCCc------ceEEEE------------------------------
Confidence 999999621 0121 111111
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccC
Q 046241 488 VDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDH 567 (638)
Q Consensus 488 ~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~ 567 (638)
..+.|++.|.+++... .+ .+.+..++.+.++|++++||+|......
T Consensus 88 -----~~~~i~l~Hg~~~~~~---~~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~----------------------- 133 (192)
T 1z2w_A 88 -----GQFKIGLIHGHQVIPW---GD---MASLALLQRQFDVDILISGHTHKFEAFE----------------------- 133 (192)
T ss_dssp -----TTEEEEEECSCCCCBT---TC---HHHHHHHHHHHSSSEEECCSSCCCEEEE-----------------------
T ss_pred -----CCEEEEEECCCcCCCC---CC---HHHHHHHHHhcCCCEEEECCcCcCccEe-----------------------
Confidence 1256788885554221 11 3456677777899999999999865321
Q ss_pred CCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEcCCCcE-EEEEEEEec
Q 046241 568 SNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTREV-EDSFRIIKA 637 (638)
Q Consensus 568 ~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~v-~D~f~I~k~ 637 (638)
.++..++-.|+.+....+.. .....+|..++++++.++++++....+++ +.++++.|+
T Consensus 134 --~~~~~~inpGS~~~~~~~~~----------~~~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 192 (192)
T 1z2w_A 134 --HENKFYINPGSATGAYNALE----------TNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 192 (192)
T ss_dssp --ETTEEEEECCCTTCCCCSSC----------SCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECC
T ss_pred --ECCEEEEECCcccccCCCCC----------cCCCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEccC
Confidence 02345677777755321100 01245899999999999999998766665 667776653
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.2e-11 Score=116.61 Aligned_cols=166 Identities=16% Similarity=0.174 Sum_probs=110.4
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+|++++||+|.. ...++++++.+.+ ++|+|+++||+.+. .++.+.. |++.+
T Consensus 7 m~i~~isD~H~~--------------~~~~~~~~~~~~~-~~d~i~~~GD~~~~------------~l~~l~~--~~~~v 57 (176)
T 3ck2_A 7 QTIIVMSDSHGD--------------SLIVEEVRDRYVG-KVDAVFHNGDSELR------------PDSPLWE--GIRVV 57 (176)
T ss_dssp EEEEEECCCTTC--------------HHHHHHHHHHHTT-TSSEEEECSCCCSC------------TTCGGGT--TEEEC
T ss_pred cEEEEEecCCCC--------------HHHHHHHHHHhhc-CCCEEEECCCCchH------------HHHhhhC--CeEEe
Confidence 899999999932 3456677777655 89999999998431 2333332 89999
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccc
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASV 488 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~ 488 (638)
+||||... ..|. ...+..
T Consensus 58 ~GNhD~~~-------------------------~~p~------~~~~~~------------------------------- 75 (176)
T 3ck2_A 58 KGNMDFYA-------------------------GYPE------RLVTEL------------------------------- 75 (176)
T ss_dssp CCTTCCST-------------------------TCCS------EEEEEE-------------------------------
T ss_pred cCcccchh-------------------------cCCc------EEEEEE-------------------------------
Confidence 99999621 0121 000000
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCC
Q 046241 489 DRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHS 568 (638)
Q Consensus 489 ~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~ 568 (638)
..+.|++.|.|++... .. .+.+..++.++++|++++||+|......
T Consensus 76 ----~~~~i~~~Hg~~~~~~--~~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------------ 121 (176)
T 3ck2_A 76 ----GSTKIIQTHGHLFDIN--FN----FQKLDYWAQEEEAAICLYGHLHVPSAWL------------------------ 121 (176)
T ss_dssp ----TTEEEEEECSGGGTTT--TC----SHHHHHHHHHTTCSEEECCSSCCEEEEE------------------------
T ss_pred ----CCeEEEEECCCccCCC--CC----HHHHHHHHHhcCCCEEEECCcCCCCcEE------------------------
Confidence 1246888899886432 11 2356677788999999999999865421
Q ss_pred CCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEcCCCcEEEEEEE
Q 046241 569 NYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTREVEDSFRI 634 (638)
Q Consensus 569 ~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~v~D~f~I 634 (638)
.++..++..|+.|...... ...+|..++++++.++++++.. +|+++.+++.
T Consensus 122 -~~~~~~inpGs~~~~~~~~-------------~~~~y~il~~~~~~~~v~~~~~-~~~~~~~~~~ 172 (176)
T 3ck2_A 122 -EGKILFLNPGSISQPRGTI-------------RECLYARVEIDDSYFKVDFLTR-DHEVYPGLSK 172 (176)
T ss_dssp -ETTEEEEEECCSSSCCTTC-------------CSCCEEEEEECSSEEEEEEECT-TSCBCTTCCE
T ss_pred -ECCEEEEECCCCCcCCCCC-------------CCCeEEEEEEcCCEEEEEEEEE-CCEEcchhhc
Confidence 0235677778876543210 1248999999999999999875 7888775544
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.33 E-value=4.6e-12 Score=127.76 Aligned_cols=212 Identities=10% Similarity=0.044 Sum_probs=114.8
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh---CC--CccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD---NG--SVDSIFHIGDISYATGFLVEWDFFLHQISPVASRV 403 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~---~~--~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~v 403 (638)
+|++++||+|.. ...++++++.+. .. ++|+|+++||+++......+ ..+.+..+....
T Consensus 2 m~i~~isD~H~~--------------~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~---~~~~l~~l~~~~ 64 (252)
T 1nnw_A 2 VYVAVLANIAGN--------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKE---VIEVIKDLTKKE 64 (252)
T ss_dssp CEEEEEECCTTC--------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHH---HHHHHHHHHHHS
T ss_pred cEEEEEeecCCC--------------HHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHH---HHHHHHhhHhhc
Confidence 689999999952 234555666554 45 89999999999964322222 233333333236
Q ss_pred ceEEecCCCccCCCCCCCCcccCCCCCCccchhccc--cccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHH
Q 046241 404 SYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYET--YFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWM 481 (638)
Q Consensus 404 P~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~--~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL 481 (638)
|+++++||||..... ... . +. .+.. .+..+ .+ + ...+. ........+|++||
T Consensus 65 ~~~~v~GNhD~~~~~-~~~-----~----~~-~~~~~~~~~~~------~~-----~---~~~~~-~~~~~l~~~~~~~L 118 (252)
T 1nnw_A 65 NVKIIRGKYDQIIAM-SDP-----H----AT-DPGYIDKLELP------GH-----V---KKALK-FTWEKLGHEGREYL 118 (252)
T ss_dssp CEEEECCHHHHHHHH-SCT-----T----CS-SSGGGGGSSCC------HH-----H---HHHHH-HHHHHHHHHHHHHH
T ss_pred CeeEEecchHHHhhc-ccc-----c----cC-Ccccccchhhh------HH-----H---HHHHH-HHHHHCCHHHHHHH
Confidence 899999999963211 000 0 00 0000 00000 00 0 00000 00001246788998
Q ss_pred HHHhccccCCCCCeEEEEeccCCccC-CCCCCCHHHHHHHHHHHHhC-CCeEEEEccccccceecccccCccccCCccCC
Q 046241 482 KKDMASVDRSKTPWLIFSGHRPMYSS-LSSSVDNKFVDAVEPLLLDN-KVDLALFGHVHNYERTCSVYKQSCLAMPTKDA 559 (638)
Q Consensus 482 ~~~La~~~r~~~~w~IV~~H~P~yss-~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~ 559 (638)
++........-....|++.|++++.. ..........+.+..++.++ +++++++||+|......
T Consensus 119 ~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------------- 183 (252)
T 1nnw_A 119 RDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------------- 183 (252)
T ss_dssp HTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE---------------
T ss_pred HhCCceEEEeeCCcEEEEEcCCCCCCcccccCCCCCHHHHHHHHhcCCCCCEEEECCccccceEe---------------
Confidence 87443321111224677889887422 11111111135677788888 99999999999865431
Q ss_pred CCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEE
Q 046241 560 NGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFV 621 (638)
Q Consensus 560 ~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~ 621 (638)
.++.++|..|+.|...+.. ...+|..+++++.+++++.+
T Consensus 184 ----------~~~~~~in~Gs~~~~~~~~-------------~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 184 ----------TRYGRVVCPGSVGFPPGKE-------------HKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp ----------ETTEEEEEECCSSSCSSSS-------------CCEEEEEEETTTCCEEEEEE
T ss_pred ----------cCCeEEEECCCccCCCCCC-------------CcceEEEEECCCCeEEEEEe
Confidence 0235678888887643210 12468888887766666554
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.31 E-value=5.8e-11 Score=117.56 Aligned_cols=189 Identities=9% Similarity=0.053 Sum_probs=110.9
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+|++++||+|........ . +.+.+.+++.++|+|+++||++. ...++.++.+ ..|++++
T Consensus 26 m~i~~iSD~H~~~~~~~l--------~---~~l~~~~~~~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~V 84 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKEL--------P---SNFRELLATDKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYIV 84 (215)
T ss_dssp EEEEEECCCCTTTTCSSC--------C---GGGHHHHHCTTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEEC
T ss_pred cEEEEEecCCCCCChHHH--------H---HHHHHHHhcCCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEEe
Confidence 899999999975421100 1 12222234578999999999984 1233444443 3589999
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccc
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASV 488 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~ 488 (638)
+||||..... . ...+.. .+|. ... + +
T Consensus 85 ~GNHD~~~~~-----~---------~~~~~~--~lp~------~~~------------------------------~-~- 110 (215)
T 2a22_A 85 SGDLDSAIFN-----P---------DPESNG--VFPE------YVV------------------------------V-Q- 110 (215)
T ss_dssp CCTTCCSCCB-----C---------CGGGTB--CCCS------EEE------------------------------E-E-
T ss_pred cCCCcCcccc-----c---------ChhhHh--hCCc------eEE------------------------------E-e-
Confidence 9999974211 0 000000 0010 000 0 0
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCC
Q 046241 489 DRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHS 568 (638)
Q Consensus 489 ~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~ 568 (638)
...+.|++.|.+++... .+ .+.+..++.+.++|++++||+|......
T Consensus 111 ---~~~~~i~l~Hg~~~~~~---~~---~~~l~~~~~~~~~d~vl~GHtH~~~~~~------------------------ 157 (215)
T 2a22_A 111 ---IGEFKIGLMHGNQVLPW---DD---PGSLEQWQRRLDCDILVTGHTHKLRVFE------------------------ 157 (215)
T ss_dssp ---ETTEEEEEECSTTSSST---TC---HHHHHHHHHHHTCSEEEECSSCCCEEEE------------------------
T ss_pred ---cCCeEEEEEcCCccCCC---CC---HHHHHHHHhhcCCCEEEECCcCCCccEe------------------------
Confidence 12356888896554321 11 3456677777899999999999865321
Q ss_pred CCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEcCCCcE-EEEEEEEe
Q 046241 569 NYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTREV-EDSFRIIK 636 (638)
Q Consensus 569 ~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~v-~D~f~I~k 636 (638)
.+++.++-.|+.+....+.. .....+|..++++++.++++++...+|++ +.+..+.|
T Consensus 158 -~~~~~~inpGS~~~~~~~~~----------~~~~~~y~il~i~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 158 -KNGKLFLNPGTATGAFSALT----------PDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp -ETTEEEEECCCSSCCCCTTS----------TTCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred -eCCEEEEECCcccccCCCCC----------CCCCCcEEEEEEeCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 02345666777754321100 01245899999999999999998767764 66665554
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=3.6e-11 Score=129.50 Aligned_cols=188 Identities=11% Similarity=0.062 Sum_probs=101.8
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCC-cHHHHHHHHHhhhhhcc-Ccce
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATG-FLVEWDFFLHQISPVAS-RVSY 405 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g-~~~~wd~f~~~l~~l~~-~vP~ 405 (638)
.+||++++|+|.+........ ........++++++.+.+.++|+||++||+++... ....+..+.+.++.+.. .+|+
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~-r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~pv 98 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDD-REKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKV 98 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHH-HHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEccCCCCccccCcch-hhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcE
Confidence 499999999998642110000 00011345777888887889999999999986542 22345566666666643 5899
Q ss_pred EEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHH---H
Q 046241 406 MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWM---K 482 (638)
Q Consensus 406 ~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL---~ 482 (638)
++++||||..... .... ....+...+..-. ...++..+.+++.|+.++...... ..+..+|| .
T Consensus 99 ~~v~GNHD~~~~~-~~~~---------~~~~l~~~v~~l~---~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~ 164 (386)
T 3av0_A 99 YIVAGNHEMPRRL-GEES---------PLALLKDYVKILD---GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFE 164 (386)
T ss_dssp EECCCGGGSCSST-TSCC---------GGGGGTTTCEECS---EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHH
T ss_pred EEEcCCCCCCccc-cccC---------HHHHHHHHeEEcC---CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhh
Confidence 9999999974322 0000 0000111010000 011221112458888888653321 22333343 3
Q ss_pred HHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 483 KDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 483 ~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
..+. ...+.|+++|.|+.......... .+. .+. ++|++++||.|..++
T Consensus 165 ~~~~-----~~~~~Ill~H~~~~~~~~~~~~~----~~~-~l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 165 SEAK-----NYKKKILMLHQGINPYIPLDYEL----EHF-DLP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp HHHH-----TCSSEEEEECCCCTTTSSSSCSS----CGG-GSC--CCSEEEECSCCSCEE
T ss_pred hhcc-----cCCCEEEEECcCccccCCCCccc----CHH-Hhh--hCCeEEccCCCCCcc
Confidence 3222 23458999999985321100000 011 122 399999999998743
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=8.8e-11 Score=121.48 Aligned_cols=185 Identities=14% Similarity=0.071 Sum_probs=98.7
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
.+||+++||+|..... + +-.++|+||++||+++. |...+++.+.+.++.+. ..++++
T Consensus 59 ~mri~~iSD~H~~~~~-----------------l----~i~~~D~vi~aGDl~~~-g~~~e~~~~~~~L~~l~-~~~v~~ 115 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDG-----------------I----QMPYGDILLHTGDFTEL-GLPSEVKKFNDWLGNLP-YEYKIV 115 (296)
T ss_dssp EEEEEEEBCCTTCCTT-----------------C----CCCSCSEEEECSCCSSS-CCHHHHHHHHHHHHTSC-CSEEEE
T ss_pred CeEEEEEeeCCCCcch-----------------h----ccCCCCEEEECCcccCC-CCHHHHHHHHHHHHhCC-CCeEEE
Confidence 4999999999975321 1 12579999999999964 55666777777776653 356899
Q ss_pred ecCCCccCCCCCCCCcccC--C-CCC------CccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCC---CCCCcH
Q 046241 408 AIGNHERDYLGSSGSVYES--P-DSG------GECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEH---DWSENS 475 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~--~-ds~------ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~---~~~~~~ 475 (638)
++||||+.... ..+.. . +.. ......+...-.+..+..--.--+..+++++|+...-.. .+....
T Consensus 116 V~GNHD~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~ 192 (296)
T 3rl5_A 116 IAGNHELTFDK---EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNL 192 (296)
T ss_dssp CCCTTCGGGCH---HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBC
T ss_pred EcCCcccccch---hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCc
Confidence 99999984321 00000 0 000 000000000000111000000124567889988844221 111111
Q ss_pred HHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCC---CCHHHHHHHHHHH-HhCCCeEEEEccccccc
Q 046241 476 EQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSS---VDNKFVDAVEPLL-LDNKVDLALFGHVHNYE 541 (638)
Q Consensus 476 ~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~---~~~~~r~~l~~Ll-~k~~VdlvlsGH~H~Ye 541 (638)
++.+++.+.+.... ....|++.|.|++...... ......+.|..++ ++++++++++||+|...
T Consensus 193 ~~~~~~~~~~~~ip---~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~ 259 (296)
T 3rl5_A 193 PRGQSLLDKWNLIP---EGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGY 259 (296)
T ss_dssp CTTHHHHHHHTTSC---TTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGC
T ss_pred chHHHHHHHHhhCC---CCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCC
Confidence 22224433333332 2345889999998764211 0001123445555 68899999999999754
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.5e-10 Score=116.66 Aligned_cols=214 Identities=17% Similarity=0.171 Sum_probs=116.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+|++++||+|.. ...++++++.+. ++|.++++||++....... +..+.+..+. +++.+
T Consensus 4 mri~~isDiHg~--------------~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~---~~~~~l~~~~---~~~~v 61 (246)
T 3rqz_A 4 MRILIISDVHAN--------------LVALEAVLSDAG--RVDDIWSLGDIVGYGPRPR---ECVELVRVLA---PNISV 61 (246)
T ss_dssp CCEEEECCCTTC--------------HHHHHHHHHHHC--SCSEEEECSCCSSSSSCHH---HHHHHHHHHC---SSEEC
T ss_pred cEEEEEeecCCC--------------HHHHHHHHHhcc--CCCEEEECCCcCCCCCCHH---HHHHHHHhcC---CCEEE
Confidence 899999999932 345667777765 8999999999996433222 2333333331 25899
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccc
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASV 488 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~ 488 (638)
.||||..... . +... .+.... .....|. ......++++||++.....
T Consensus 62 ~GNhD~~~~~-~---~~~~--------~~~~~~-----~~~~~~~----------------~~~l~~~~~~~L~~lp~~~ 108 (246)
T 3rqz_A 62 IGNHDWACIG-R---LSLD--------EFNPVA-----RFASYWT----------------TMQLQAEHLQYLESLPNRM 108 (246)
T ss_dssp CCHHHHHHTC-C---CCCC----------CGGG-----GCHHHHH----------------HHHCCHHHHHHHHHCCSEE
T ss_pred eCchHHHHhc-c---CCcc--------ccCHHH-----HHHHHHH----------------HHHcCHHHHHHHHhCCcEE
Confidence 9999974221 0 0000 000000 0000000 0123578899999754443
Q ss_pred cCCCCCeEEEEeccCCccCC-CCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccC
Q 046241 489 DRSKTPWLIFSGHRPMYSSL-SSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDH 567 (638)
Q Consensus 489 ~r~~~~w~IV~~H~P~yss~-~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~ 567 (638)
.. . .|++.|.++.... ..... ...+..+|.++++|++|+||+|.......-.+..+...+..+ .+ ..+.
T Consensus 109 ~~--~--~i~~~Hg~p~~~~~~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~-~~-~~~~- 178 (246)
T 3rqz_A 109 ID--G--DWTVVHGSPRHPIWEYIYN---ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPN-DG-EVLD- 178 (246)
T ss_dssp EE--T--TEEEESSCSSSTTTCCCCS---HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCC-TT-CEEE-
T ss_pred EE--C--CEEEEECCcCCccccccCC---hHHHHHHHhccCCCEEEECCcCcccEEEeccccccccccccc-cc-ceee-
Confidence 21 1 3677788876532 12122 246678899999999999999974322100000000000000 00 0010
Q ss_pred CCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEE
Q 046241 568 SNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFV 621 (638)
Q Consensus 568 ~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~ 621 (638)
-..+...|..|+.|.+.+..+ .-+|+.++.+..+++++.+
T Consensus 179 -l~~g~~ivNpGSVG~Prdg~p-------------~A~Y~i~d~~~~~v~~~rv 218 (246)
T 3rqz_A 179 -VSSGRYIINPGAVGQPRDGDP-------------RASYAIFEPDAQRVTFHRV 218 (246)
T ss_dssp -CSSSCEEEEECCSSCCCSSCC-------------SEEEEEEEGGGTEEEEEEE
T ss_pred -cCCCeEEEECCccCCCCCcCC-------------cceEEEEECCCCEEEEEEe
Confidence 012366788899998754322 2368888887776666654
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.18 E-value=1.4e-10 Score=124.61 Aligned_cols=196 Identities=15% Similarity=0.245 Sum_probs=109.6
Q ss_pred EEEEEEecCCCCCC----CCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCC--cHHHHHHHHHhhhhhccC
Q 046241 329 LRFLTYGDMGKAPL----DDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATG--FLVEWDFFLHQISPVASR 402 (638)
Q Consensus 329 ~rf~v~GD~g~~~~----~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g--~~~~wd~f~~~l~~l~~~ 402 (638)
+||++++|+|.+.. ..... ........++++.+.+.+.+||+||++||++++.+ ....++.+.+.++.+...
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~--~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~ 78 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVD--RREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT 78 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEE--CHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcC--hhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC
Confidence 58999999998764 11000 01112456677777777789999999999993322 234455666666666534
Q ss_pred cceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCC----CCCCeEEEE--EC-CEEEEEEeCCCCC----
Q 046241 403 VSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPA----RDKPWYSIE--QA-GVHFTVMSTEHDW---- 471 (638)
Q Consensus 403 vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~----~~~~yYsfd--~G-~v~fi~LDT~~~~---- 471 (638)
+|+++++||||..... .+ ..... .++.+. .... +.+. .| .+.|+.+.-....
T Consensus 79 ~~v~~i~GNHD~~~~~----~~----------~~~~~--~~~~~~~~~~~~~~-v~l~~~~G~~v~i~glp~~~~~~~~~ 141 (379)
T 3tho_B 79 APVVVLPGNQDWKGLK----LF----------GNFVT--SISSDITFVMSFEP-VDVEAKRGQKVRILPFPYPDESEALR 141 (379)
T ss_dssp SCEEECCCTTSCTTHH----HH----------HHHHH--TTCSSEEECCSSCC-EEEECTTCCEEEEEEECCCCCC----
T ss_pred CCEEEEcCCCccccCc----cc----------ccccc--ccCCcceeecccce-EEEEcCCCCEEEEEECCCCCHHHHhh
Confidence 8999999999952100 00 00000 001000 0011 2222 23 4777777543221
Q ss_pred CCcHHHHHHHHHHhccc---cCCCCCeEEEEeccCCccCCC-CCCCHHHHHHHHHHHHhCCCeEEEEcccccccee
Q 046241 472 SENSEQYEWMKKDMASV---DRSKTPWLIFSGHRPMYSSLS-SSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 472 ~~~~~Q~~WL~~~La~~---~r~~~~w~IV~~H~P~yss~~-~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
..+.++.+|+.+.|+.. ......+.|+++|.++..... ......+...+...+...++|+++.||.|..+..
T Consensus 142 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 142 KNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC-------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred hhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCccccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 12457789999988721 112456789999999854322 1110000011222233468999999999998653
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-10 Score=118.01 Aligned_cols=217 Identities=12% Similarity=0.092 Sum_probs=122.9
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
+.|++++||+|.. ...++++++.+.+.++|.|+++||++...... .+..+.++.+ .|+++
T Consensus 11 ~~~i~~iSDiHg~--------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~~---~~~~~ 70 (270)
T 3qfm_A 11 MTKIALLSDIHGN--------------TTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQL---PITAR 70 (270)
T ss_dssp CEEEEEECCCTTC--------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHTS---CEEEE
T ss_pred ccEEEEEecCCCC--------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHcc---CCEEE
Confidence 3999999999942 35567777777777899999999999643222 2344444433 37899
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhcc
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMAS 487 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~ 487 (638)
+.||||..... .. . +.+ .|..|. ..+.. . .+ .........+|++||++.-..
T Consensus 71 v~GNhD~~~~~----~~---~--~~~------~~~~~~----~~~~~----~----~~-~~~~~~L~~~~~~~L~~LP~~ 122 (270)
T 3qfm_A 71 VLGNWEDSLWH----GV---R--KEL------DSTRPS----QRYLL----R----QC-QYVLEEISLEEIEVLHNQPLQ 122 (270)
T ss_dssp CCCHHHHHHHH----HH---T--TCS------CTTSHH----HHHHH----H----HH-HHHHTTSCHHHHHHHHSCCSE
T ss_pred EcCChHHHHHH----hh---c--ccc------CCCcHH----HHHHH----H----HH-HHHHHHcCHHHHHHHHhCCCc
Confidence 99999963210 00 0 000 000000 00000 0 00 000113457899999875443
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCC-CHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCcccc
Q 046241 488 VDRSKTPWLIFSGHRPMYSSLSSSV-DNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYD 566 (638)
Q Consensus 488 ~~r~~~~w~IV~~H~P~yss~~~~~-~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~ 566 (638)
....-....|++.|..+........ ...-.+.+..++.+.++|++++||+|...... +
T Consensus 123 ~~~~~~g~~i~lvHg~p~~~~~~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-~-------------------- 181 (270)
T 3qfm_A 123 IHRQFGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-G-------------------- 181 (270)
T ss_dssp EEEEETTEEEEEESSBTTBSSSSTTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-C--------------------
T ss_pred eEEEECCcEEEEEECCCCCCCCceecCCCcHHHHHHHhcccCCCEEEECCcCchHhee-c--------------------
Confidence 2111123467778876543211110 11124567788888899999999999643211 0
Q ss_pred CCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCE-EEEEEEEc
Q 046241 567 HSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEE-MKFEFVNS 623 (638)
Q Consensus 567 ~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~-L~~~~~~~ 623 (638)
.++.++|..|+.|.+.+..+.. .......|+.++++++. +.++++..
T Consensus 182 ---~~~~~~iNpGSvg~pr~~~~~~-------~~~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 182 ---TGGQLIVNPGSIGQPFFLDAQL-------RKDLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp ---TTSCEEEEECCSSSCCCSSTTG-------GGCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred ---cCCEEEEECCCccCCCCCCccc-------cCCCCCEEEEEEecCCCceEEEEEEe
Confidence 1245788899999764432100 00113479999998776 67888753
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.2e-09 Score=106.09 Aligned_cols=62 Identities=16% Similarity=0.387 Sum_probs=46.7
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+|++++||+|.. ...++++++.+.+.++|+|+++||+++. ...+.++.+ ..|++++
T Consensus 26 m~i~~iSD~Hg~--------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~V 81 (190)
T 1s3l_A 26 MKIGIMSDTHDH--------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIAT 81 (190)
T ss_dssp CEEEEECCCTTC--------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEEE
T ss_pred eEEEEEeeCCCC--------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEE
Confidence 899999999931 3455666676666789999999999842 234444433 5799999
Q ss_pred cCCCcc
Q 046241 409 IGNHER 414 (638)
Q Consensus 409 ~GNHD~ 414 (638)
+||||.
T Consensus 82 ~GNhD~ 87 (190)
T 1s3l_A 82 YGNNDG 87 (190)
T ss_dssp CCTTCC
T ss_pred eCCCcc
Confidence 999996
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.7e-08 Score=108.01 Aligned_cols=87 Identities=14% Similarity=0.163 Sum_probs=60.3
Q ss_pred ccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc-HHHHHHHHHhhhhh------
Q 046241 327 EVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF-LVEWDFFLHQISPV------ 399 (638)
Q Consensus 327 ~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~-~~~wd~f~~~l~~l------ 399 (638)
..+||++++|+|.+...... .........++++++.+.+.+||+||++||+++.... ......+.+.++.+
T Consensus 31 ~~mrilhiSDlHLg~~~~~~--~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~ 108 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDA--VRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRP 108 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCT--TTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSC
T ss_pred CCEEEEEEeccCCCCccccc--chhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCc
Confidence 45999999999987643211 1111234577888888888999999999999865432 23444555555432
Q ss_pred ----------------------------ccCcceEEecCCCccC
Q 046241 400 ----------------------------ASRVSYMTAIGNHERD 415 (638)
Q Consensus 400 ----------------------------~~~vP~~~v~GNHD~~ 415 (638)
...+|++++.||||..
T Consensus 109 ~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 109 VQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp CCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred ccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2379999999999973
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.96 E-value=6.6e-10 Score=107.93 Aligned_cols=150 Identities=14% Similarity=0.180 Sum_probs=88.1
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC--CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN--GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~ 406 (638)
+|++++||+|.+........... ......+++.+.+.+ .++|+|+++||+++.. .+++.+.+.++.+ ..|++
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l--~~~~~ 75 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEV-RFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKAL--PGRKI 75 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTT-CCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHS--SSEEE
T ss_pred cEEEEEeccccCCCccccccCCC-CHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHC--CCCEE
Confidence 68999999997543100000000 012344556555554 5899999999999652 2223344444444 25899
Q ss_pred EecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhc
Q 046241 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMA 486 (638)
Q Consensus 407 ~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La 486 (638)
.++||||.... .+... |-. +. +..|| +
T Consensus 76 ~v~GNhD~~~~------------------~~~~~-----------~~~----------l~----------~~~~l----~ 102 (195)
T 1xm7_A 76 LVMGNHDKDKE------------------SLKEY-----------FDE----------IY----------DFYKI----I 102 (195)
T ss_dssp EECCTTCCCHH------------------HHTTT-----------CSE----------EE----------SSEEE----E
T ss_pred EEeCCCCCchh------------------hhhhh-----------hhc----------hh----------HHHHH----H
Confidence 99999996210 11111 100 00 11121 1
Q ss_pred cccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 487 SVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 487 ~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
+. ..+.|+++|+|++...... .....+.+..++.+++++++++||+|....
T Consensus 103 ~~----~~~~i~~~H~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 103 EH----KGKRILLSHYPAKDPITER-YPDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp EE----TTEEEEEESSCSSCSSCCS-CHHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred hc----CCcEEEEEccCCcCCCccc-ccchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 11 2357899999987553222 123457888899999999999999998764
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-07 Score=102.40 Aligned_cols=244 Identities=14% Similarity=0.090 Sum_probs=125.6
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcH-HHHHHHHHhhhh--------
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFL-VEWDFFLHQISP-------- 398 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~-~~wd~f~~~l~~-------- 398 (638)
.+||++++|+|.+...... .........++++++.+.+.+||+||++||+++..... .....+++.++.
T Consensus 76 ~mrilhiSDlHLG~~~~~~--~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~ 153 (472)
T 4fbk_A 76 TIRILISSDPHVGYGEKDP--VRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 153 (472)
T ss_dssp CEEEEEECCCCBTTTTTCT--TTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CeEEEEEecccCCCcccCc--ccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 4999999999987543210 11112345778888888889999999999999654322 223334443332
Q ss_pred ----h----------------------ccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhc------cccccCCCC
Q 046241 399 ----V----------------------ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAY------ETYFPMPIP 446 (638)
Q Consensus 399 ----l----------------------~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y------~~~f~~P~~ 446 (638)
+ ...+|++++.||||..... .+ .+.... ...|....
T Consensus 154 ~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~----~~-------~s~~~LL~~~g~v~l~g~~~- 221 (472)
T 4fbk_A 154 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD----GR-------YSALDILQVTGLVNYFGRVP- 221 (472)
T ss_dssp CCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC------C-------CCHHHHHHHTTSCEECCCCS-
T ss_pred hheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcccc----cc-------ccHHHHhccCCcEEEeCCcc-
Confidence 1 2379999999999973211 00 000111 01121110
Q ss_pred CCCCC---eEEEEECC--EEEEEEeCCCCCCCcHHHHHHHHHHhcc-ccC---CCCCeEEEEeccCCccCCCCCCCHHHH
Q 046241 447 ARDKP---WYSIEQAG--VHFTVMSTEHDWSENSEQYEWMKKDMAS-VDR---SKTPWLIFSGHRPMYSSLSSSVDNKFV 517 (638)
Q Consensus 447 ~~~~~---yYsfd~G~--v~fi~LDT~~~~~~~~~Q~~WL~~~La~-~~r---~~~~w~IV~~H~P~yss~~~~~~~~~r 517 (638)
..++. -..+.-|+ +.+..+.-- ....-..++.+.... ... ....+.|++.|...........-+
T Consensus 222 ~~d~i~~~pv~l~kg~~~valyGl~y~----~d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yip--- 294 (472)
T 4fbk_A 222 ENDNIVVSPILLQKGFTKLALYGISNV----RDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLP--- 294 (472)
T ss_dssp CSSSEEECCEEEEETTEEEEEEECCCC----CHHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTTSSCC---
T ss_pred cCCceeEEEEEEEeCCceEEEEecCCC----chhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCccccCC---
Confidence 00110 01234454 334444321 111111333332222 111 123458999999875432111000
Q ss_pred HHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcc
Q 046241 518 DAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWS 597 (638)
Q Consensus 518 ~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws 597 (638)
.-+...++|+++.||.|..+...- .+ + .++...+-.|+.... .++.
T Consensus 295 ----e~ll~~g~DyValGH~H~~~~~~~-~~------~--------------~~g~~ivyPGS~~~~--s~~e------- 340 (472)
T 4fbk_A 295 ----ESFIQDFYDFVLWGHEHECLIDGS-YN------P--------------TQKFTVVQPGSTIAT--SLSP------- 340 (472)
T ss_dssp ----GGGSCTTCSEEEEESCCSCEEEEE-EE------T--------------TTTEEEEECCCSSCS--SCCG-------
T ss_pred ----hhhhhcCCCEEEecCcccceeeec-cc------C--------------CCCeEEEECCCcccc--ccCc-------
Confidence 124456899999999999875320 00 0 012222223333110 1110
Q ss_pred eeeeccccEEEEEEeCCEEEEEEEEcCCCc
Q 046241 598 LIRISKFGYLRGNANKEEMKFEFVNSDTRE 627 (638)
Q Consensus 598 ~~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~ 627 (638)
......||..|+++++.+.++++....-+
T Consensus 341 -~E~~~kg~~lveI~~~~v~ve~I~L~t~R 369 (472)
T 4fbk_A 341 -GETAPKHCGILNITGKDFHLEKIRLRTVR 369 (472)
T ss_dssp -GGCSCCEEEEEEEETTEEEEEEEECSSSC
T ss_pred -cCCCCCEEEEEEEECCEEEEEEEECCCcc
Confidence 00125699999999999999999865434
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.94 E-value=1e-07 Score=103.12 Aligned_cols=247 Identities=13% Similarity=0.058 Sum_probs=125.7
Q ss_pred ccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcH-HHHHHHHHhhhh-------
Q 046241 327 EVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFL-VEWDFFLHQISP------- 398 (638)
Q Consensus 327 ~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~-~~wd~f~~~l~~------- 398 (638)
..+||++++|+|.+...... .........++++++.+.+.++|+||++||+++..... .....+++.++.
T Consensus 12 ~~mrilhiSDlHLg~~~~~~--~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~ 89 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDP--VRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKP 89 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCT--TTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCC
T ss_pred CCeEEEEEEcCCCCCccccc--ccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCc
Confidence 34999999999987543210 11112356778888888889999999999998654322 223333443332
Q ss_pred -----h----------------------ccCcceEEecCCCccCCCCCCCCcccCCCCCCccc--hhccccccCCCCCCC
Q 046241 399 -----V----------------------ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECG--VAYETYFPMPIPARD 449 (638)
Q Consensus 399 -----l----------------------~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~--~~y~~~f~~P~~~~~ 449 (638)
+ ...+|++++.||||..... .+ .++.+.. ......|.... ..+
T Consensus 90 ~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~----~~---~s~~~lL~~~g~v~l~g~~~-~~~ 161 (417)
T 4fbw_A 90 CELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD----GR---YSALDILQVTGLVNYFGRVP-END 161 (417)
T ss_dssp CCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC---------C---CCHHHHHHHTTSCEECCCCC----
T ss_pred ccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc----cc---ccHHHHhccCCeEEEeCCcc-cCC
Confidence 2 1379999999999973211 00 0000000 00001121110 000
Q ss_pred CC---eEEEEECC--EEEEEEeCCCCCCCcHHHHHHHHHHhcc-cc---CCCCCeEEEEeccCCccCCCCCCCHHHHHHH
Q 046241 450 KP---WYSIEQAG--VHFTVMSTEHDWSENSEQYEWMKKDMAS-VD---RSKTPWLIFSGHRPMYSSLSSSVDNKFVDAV 520 (638)
Q Consensus 450 ~~---yYsfd~G~--v~fi~LDT~~~~~~~~~Q~~WL~~~La~-~~---r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l 520 (638)
+. -..+.-|. +.+..+.-- ..+.-..++.+.... .. .....+.|++.|...........-+
T Consensus 162 ~i~~~pv~l~~g~~~valyG~~~~----~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yip------ 231 (417)
T 4fbw_A 162 NIVVSPILLQKGFTKLALYGISNV----RDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLP------ 231 (417)
T ss_dssp CEEECCEEEEETTEEEEEEEECCC----CHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSCC------
T ss_pred ceeEEeEEEEecCceEEEEeccCC----chhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccCc------
Confidence 10 01234444 444455432 111111333332222 11 1234568999999875432111101
Q ss_pred HHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceee
Q 046241 521 EPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIR 600 (638)
Q Consensus 521 ~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~ 600 (638)
.-+...++|++++||.|..+...-. + ..++...+-.|+.... .+. ...
T Consensus 232 -~~l~~~~~DyvalGH~H~~~~~~~~-~--------------------~~~g~~i~~PGS~~~~--s~~--------e~E 279 (417)
T 4fbw_A 232 -ESFIQDFYDFVLWGHEHECLIDGSY-N--------------------PTQKFTVVQPGSTIAT--SLS--------PGE 279 (417)
T ss_dssp -GGGSCTTCSEEEEESCCSCEEEEEE-E--------------------TTTTEEEEECCCSSCS--SCC--------HHH
T ss_pred -hhHhhcCCCEEEecCccccceeccc-c--------------------CCCCEEEEECCCCCcC--CCc--------ccc
Confidence 1245568999999999997753100 0 0012223333443211 011 000
Q ss_pred eccccEEEEEEeCCEEEEEEEEcCC
Q 046241 601 ISKFGYLRGNANKEEMKFEFVNSDT 625 (638)
Q Consensus 601 ~~~~Gy~~v~v~~~~L~~~~~~~~d 625 (638)
....||..|+++++.+.++++....
T Consensus 280 ~~~kg~~lvei~~~~~~~e~i~l~~ 304 (417)
T 4fbw_A 280 TAPKHCGILNITGKDFHLEKIRLRT 304 (417)
T ss_dssp HSCCEEEEEEEETTEEEEEEEECSS
T ss_pred CCCCEEEEEEEECCEEEEEEEECCC
Confidence 1356899999999999999997644
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.6e-08 Score=93.83 Aligned_cols=63 Identities=14% Similarity=0.072 Sum_probs=41.3
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+|++++||+|...... .+.++++.+. .++|+|+++||+++. ...+.++.+ ..|++.+
T Consensus 23 mri~~iSD~Hg~~~~~------------~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V 79 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMA------------SLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGV 79 (178)
T ss_dssp EEEEEECCCCBTTTTC------------CCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEEC
T ss_pred eEEEEEecccCCCCHH------------HHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEE
Confidence 8999999999422111 1123333333 679999999999851 233334433 3689999
Q ss_pred cCCCcc
Q 046241 409 IGNHER 414 (638)
Q Consensus 409 ~GNHD~ 414 (638)
+||||.
T Consensus 80 ~GNhD~ 85 (178)
T 2kkn_A 80 HGNMDY 85 (178)
T ss_dssp CCSSSC
T ss_pred ECCCCc
Confidence 999996
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.89 E-value=2.5e-09 Score=112.72 Aligned_cols=86 Identities=14% Similarity=0.103 Sum_probs=57.9
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCC-cHHHHHHHHHhhhhhcc-CcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATG-FLVEWDFFLHQISPVAS-RVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g-~~~~wd~f~~~l~~l~~-~vP~~ 406 (638)
+||++++|+|.+....... .........++++++.+.+.++|+||++||+++... ....+..+.+.++.+.. .+|++
T Consensus 1 mkilh~sD~Hlg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~ 79 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKP-QREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCH-HHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEcccCCCCcccCCc-hhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEE
Confidence 5899999999874210000 000011245667777777789999999999986532 23345666666766643 68999
Q ss_pred EecCCCccC
Q 046241 407 TAIGNHERD 415 (638)
Q Consensus 407 ~v~GNHD~~ 415 (638)
+++||||..
T Consensus 80 ~v~GNHD~~ 88 (333)
T 1ii7_A 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCcCCCc
Confidence 999999974
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.66 E-value=7.3e-07 Score=87.52 Aligned_cols=70 Identities=10% Similarity=0.141 Sum_probs=48.9
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc---HHH--HHHHHHhhhhhccCc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF---LVE--WDFFLHQISPVASRV 403 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~---~~~--wd~f~~~l~~l~~~v 403 (638)
+|++++||+|.. ...++++++.+++.++|+|+++||+++.... ..+ -.++.+.++.+ ..
T Consensus 26 mki~~iSD~H~~--------------~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~--~~ 89 (208)
T 1su1_A 26 MKLMFASDIHGS--------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--AH 89 (208)
T ss_dssp CEEEEECCCTTB--------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--GG
T ss_pred EEEEEEEcCCCC--------------HHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhc--CC
Confidence 799999999952 3455667666665689999999999964321 111 13444555544 25
Q ss_pred ceEEecCCCcc
Q 046241 404 SYMTAIGNHER 414 (638)
Q Consensus 404 P~~~v~GNHD~ 414 (638)
|++.++||||.
T Consensus 90 ~v~~V~GNHD~ 100 (208)
T 1su1_A 90 KVIAVRGNCDS 100 (208)
T ss_dssp GEEECCCTTCC
T ss_pred ceEEEECCCch
Confidence 89999999996
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.66 E-value=3.5e-08 Score=110.20 Aligned_cols=190 Identities=15% Similarity=0.121 Sum_probs=94.5
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC----CCc-cEEEEeCCcccCCCcHH---HHHHHHHhhhhh
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN----GSV-DSIFHIGDISYATGFLV---EWDFFLHQISPV 399 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~----~~p-Dfvl~~GDi~y~~g~~~---~wd~f~~~l~~l 399 (638)
.++|++++|+|....... ...+....+..+++++++ .++ +++|.+||++... ... ..+...+.+..+
T Consensus 8 ~l~Il~~~D~H~~~~~~~----~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~-~~~~~~~~~~~~~~ln~l 82 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNE----YGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFRGMNLV 82 (516)
T ss_dssp EEEEEEECCCTTCCSCCT----TSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSC-HHHHTTTTHHHHHHHHHH
T ss_pred EEEEEEecccccCccCCC----CCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCc-chhhhcCCcHHHHHHhcc
Confidence 399999999997532210 001123334444444432 245 7999999997422 111 122333444443
Q ss_pred ccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCC--C-C------C--CCCCeEEEEECCE--EEEEEe
Q 046241 400 ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMP--I-P------A--RDKPWYSIEQAGV--HFTVMS 466 (638)
Q Consensus 400 ~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P--~-~------~--~~~~yYsfd~G~v--~fi~LD 466 (638)
. +-+.++||||+++.. +......+....| . + + ..+.|..++.+++ .|+.+.
T Consensus 83 --g-~d~~~~GNHEfd~g~-------------~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~ 146 (516)
T 1hp1_A 83 --G-YDAMAIGNHEFDNPL-------------TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLT 146 (516)
T ss_dssp --T-CCEEECCGGGGSSCH-------------HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEE
T ss_pred --C-CCEEeeccccccCCH-------------HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEec
Confidence 2 336789999996421 0000000001111 0 0 0 0134667788874 556665
Q ss_pred CCCC--CC-C----------cHHH-HHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEE
Q 046241 467 TEHD--WS-E----------NSEQ-YEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLA 532 (638)
Q Consensus 467 T~~~--~~-~----------~~~Q-~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~Vdlv 532 (638)
+... +. + ..+. .+|+++ |++. .+...+|++.|.|................+...+...+||++
T Consensus 147 ~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~~~~la~~~~~~~iDli 223 (516)
T 1hp1_A 147 TDDTAKIGNPEYFTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMI 223 (516)
T ss_dssp CTTTTTSSSCCSCTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEE
T ss_pred ccCcccccCcCccCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCcccccCchHHHHHHhCCCCceeEE
Confidence 5421 11 1 1122 233333 4321 246789999999985432211110011233333444569999
Q ss_pred EEccccccc
Q 046241 533 LFGHVHNYE 541 (638)
Q Consensus 533 lsGH~H~Ye 541 (638)
|+||.|...
T Consensus 224 lgGHtH~~~ 232 (516)
T 1hp1_A 224 VGGHSQDPV 232 (516)
T ss_dssp ECCSSCCBC
T ss_pred ECCCCCccc
Confidence 999999764
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=3.7e-07 Score=102.70 Aligned_cols=191 Identities=14% Similarity=0.025 Sum_probs=97.0
Q ss_pred cEEEEEEecCCCCCCCCCcc-ccc--CCChHHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHH--HHHHHHHhhhhhcc
Q 046241 328 VLRFLTYGDMGKAPLDDSAE-HYI--QPGSLSVIKAMADEVDNGSVD-SIFHIGDISYATGFLV--EWDFFLHQISPVAS 401 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~-~~~--~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~--~wd~f~~~l~~l~~ 401 (638)
.++|++++|+|......... ... ..+....+..+++++++.++| +++.+||++....... ..+...+.+..+
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~l-- 106 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRL-- 106 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHT--
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhc--
Confidence 39999999999642210000 000 013345666677777666787 8899999985322111 122333444433
Q ss_pred CcceEEecCCCccCCCCCCCCcccCCCCCCccchhccc-cccCCCC----CCCCCeEEEEECC--EEEEEEeCCCC----
Q 046241 402 RVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYET-YFPMPIP----ARDKPWYSIEQAG--VHFTVMSTEHD---- 470 (638)
Q Consensus 402 ~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~-~f~~P~~----~~~~~yYsfd~G~--v~fi~LDT~~~---- 470 (638)
-+-+.++||||+++.. . .....-. +...++.. ....... ...+.|..++.++ +.|+.+.+...
T Consensus 107 -g~d~~~lGNHEfd~g~-~-~l~~~l~---~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~ 180 (552)
T 2z1a_A 107 -RYRAMALGNHEFDLGP-G-PLADFLK---GARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREIS 180 (552)
T ss_dssp -TCCEEECCGGGGTTCH-H-HHHHHHT---TCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHS
T ss_pred -CCCccccccccccCCH-H-HHHHHHh---hCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhcc
Confidence 2336789999996421 0 0000000 00001100 0000000 0123567788887 45566655320
Q ss_pred -----C--CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh-CCCeEEEEccccccce
Q 046241 471 -----W--SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD-NKVDLALFGHVHNYER 542 (638)
Q Consensus 471 -----~--~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~YeR 542 (638)
. ....++.+...+.|++ .+...+|++.|.|... . ..+..+ .+||++|+||.|....
T Consensus 181 ~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~----------d---~~la~~~~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 181 NPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE----------D---LKLARRLVGVQVIVGGHSHTLLG 244 (552)
T ss_dssp CCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH----------H---HHHHTTCSSCCEEEECSSCCCBS
T ss_pred CCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcch----------H---HHHHHhCCCccEEEeCCcCcccc
Confidence 0 1112333434444543 3456799999998531 0 123333 5899999999998664
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=4.4e-07 Score=101.98 Aligned_cols=192 Identities=13% Similarity=0.121 Sum_probs=96.1
Q ss_pred cEEEEEEecCCCCCCCCCc--cc----ccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccCCCcHH--HHHHHHHhhhh
Q 046241 328 VLRFLTYGDMGKAPLDDSA--EH----YIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYATGFLV--EWDFFLHQISP 398 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~--~~----~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~~g~~~--~wd~f~~~l~~ 398 (638)
.++|+.++|+|..-..... .. ....+....+..+++++++.++ +++|.+||++....... ......+.+..
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~ 104 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 104 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHh
Confidence 4999999999964322100 00 0011334556666677666566 59999999995432111 12333444444
Q ss_pred hccCcceEEecCCCccCCCCC-CC-CcccCCCCCCccchhccc-ccc-----CCC-CCCCCCeEEEEECCEE--EEEEeC
Q 046241 399 VASRVSYMTAIGNHERDYLGS-SG-SVYESPDSGGECGVAYET-YFP-----MPI-PARDKPWYSIEQAGVH--FTVMST 467 (638)
Q Consensus 399 l~~~vP~~~v~GNHD~~~~~~-sg-s~y~~~ds~ge~~~~y~~-~f~-----~P~-~~~~~~yYsfd~G~v~--fi~LDT 467 (638)
+ ... +.++||||+++... -. ..+. ++..++.. ... -|. ....+.|..++.++++ |+.+.+
T Consensus 105 l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~ 175 (546)
T 4h2g_A 105 L--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTS 175 (546)
T ss_dssp H--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEEC
T ss_pred c--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEecc
Confidence 3 233 57799999864210 00 0000 00000100 000 000 0012356778888865 455544
Q ss_pred CCC--C-CC-----cHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh-CCCeEEEEcccc
Q 046241 468 EHD--W-SE-----NSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD-NKVDLALFGHVH 538 (638)
Q Consensus 468 ~~~--~-~~-----~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H 538 (638)
... + .+ -....+.+++.+++........+|++.|.+... ... +.++ .+||++|+||.|
T Consensus 176 ~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~----------d~~---la~~~~giDlIlgGHtH 242 (546)
T 4h2g_A 176 KETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM----------DKL---IAQKVRGVDVVVGGHSN 242 (546)
T ss_dssp TTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH----------HHH---HHHHSTTCCEEECCSSC
T ss_pred cccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc----------hHH---HHHhCCCCcEEEeCCcC
Confidence 310 0 01 012234444444443323467899999988521 112 2222 379999999999
Q ss_pred ccc
Q 046241 539 NYE 541 (638)
Q Consensus 539 ~Ye 541 (638)
...
T Consensus 243 ~~~ 245 (546)
T 4h2g_A 243 TFL 245 (546)
T ss_dssp CCC
T ss_pred ccc
Confidence 854
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.5e-06 Score=97.28 Aligned_cols=194 Identities=13% Similarity=0.150 Sum_probs=98.9
Q ss_pred cEEEEEEecCCCCCCCCCcc--cccCCChHHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHHH--------HHHHHHhh
Q 046241 328 VLRFLTYGDMGKAPLDDSAE--HYIQPGSLSVIKAMADEVDNGSVD-SIFHIGDISYATGFLVE--------WDFFLHQI 396 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~--~~~~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~~--------wd~f~~~l 396 (638)
.++|+.++|+|......... .....+....+..+++++++.+++ ++|.+||++... .... .....+.+
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs-~~~~~~~~~~~~~~~~~~~l 97 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGS-PFCNYLIAHSGSSQPLVDFY 97 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSS-HHHHHHHHTTCSSHHHHHHH
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCc-HHHHHHhhcccCcchHHHHH
Confidence 49999999999643211000 001233456677777777777777 677899998532 1211 12333344
Q ss_pred hhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCC-------C---CCCCeEEEEECCEE--EEE
Q 046241 397 SPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP-------A---RDKPWYSIEQAGVH--FTV 464 (638)
Q Consensus 397 ~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~-------~---~~~~yYsfd~G~v~--fi~ 464 (638)
..+ ... +.++||||+++.. +....+.+....|.- + ....|..++.++++ ||.
T Consensus 98 n~l--g~D-~~t~GNHefd~G~-------------~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG 161 (527)
T 3qfk_A 98 NRM--AFD-FGTLGNHEFNYGL-------------PYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIG 161 (527)
T ss_dssp HHT--CCC-EECCCGGGGTTCH-------------HHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEE
T ss_pred Hhc--CCc-EEeccccccccCH-------------HHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEE
Confidence 333 233 5679999986421 000011111111100 0 02346777888854 566
Q ss_pred EeCCCC--CCC--------cHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCC-------CCCHHHHHHHHHHHHhC
Q 046241 465 MSTEHD--WSE--------NSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSS-------SVDNKFVDAVEPLLLDN 527 (638)
Q Consensus 465 LDT~~~--~~~--------~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~-------~~~~~~r~~l~~Ll~k~ 527 (638)
+.+... +.. -....+.+++.+++.. .+...+|++.|.+.-..... ..+... ..+..-+ ..
T Consensus 162 ~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~-~~la~~~-~~ 238 (527)
T 3qfk_A 162 LTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENEG-YAMLEAF-SK 238 (527)
T ss_dssp EECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCCH-HHHHHHH-GG
T ss_pred eccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchHH-HHHHHhc-CC
Confidence 655321 110 1122344444444432 35678999999876432110 011111 1222212 24
Q ss_pred CCeEEEEccccccc
Q 046241 528 KVDLALFGHVHNYE 541 (638)
Q Consensus 528 ~VdlvlsGH~H~Ye 541 (638)
+||++|+||.|...
T Consensus 239 giDlIlgGHtH~~~ 252 (527)
T 3qfk_A 239 DIDIFITGHQHRQI 252 (527)
T ss_dssp GCSEEECCSSCCEE
T ss_pred CCcEEEECCCCccc
Confidence 79999999999865
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.37 E-value=5.3e-06 Score=93.45 Aligned_cols=154 Identities=14% Similarity=0.082 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHhhCC--C--cc-EEEEeCCcccCCCcHHHH---HHHHHhhhhhccCcceEEecCCCccCCCCCCCCccc
Q 046241 354 SLSVIKAMADEVDNG--S--VD-SIFHIGDISYATGFLVEW---DFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYE 425 (638)
Q Consensus 354 ~~~~~~~l~~~i~~~--~--pD-fvl~~GDi~y~~g~~~~w---d~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~ 425 (638)
....+..+++++++. + || ++|.+||++.... ...+ +...+.+..+ ..+++ + ||||+++..
T Consensus 103 G~arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~------- 170 (562)
T 2wdc_A 103 GMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGR------- 170 (562)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCH-------
T ss_pred CHHHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhh--CCcEE-e-cchhcccCH-------
Confidence 344555666666543 3 88 8999999995332 2222 3334445444 45665 6 999985421
Q ss_pred CCCCCCccchhccccccCCC---C------C--CCCCeEEEEECCEE--EEEEeCCC-----------C--CCCcHHHHH
Q 046241 426 SPDSGGECGVAYETYFPMPI---P------A--RDKPWYSIEQAGVH--FTVMSTEH-----------D--WSENSEQYE 479 (638)
Q Consensus 426 ~~ds~ge~~~~y~~~f~~P~---~------~--~~~~yYsfd~G~v~--fi~LDT~~-----------~--~~~~~~Q~~ 479 (638)
+....+.+.+..|- + + .-+.|..++.++++ |+.+.+.. . +....+..+
T Consensus 171 ------~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (562)
T 2wdc_A 171 ------ERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQ 244 (562)
T ss_dssp ------HHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHH
T ss_pred ------HHHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHH
Confidence 00001111111110 0 0 01346677888854 55554421 0 111223333
Q ss_pred HHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh-CCCeEEEEccccccc
Q 046241 480 WMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD-NKVDLALFGHVHNYE 541 (638)
Q Consensus 480 WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~Ye 541 (638)
-+.+.|++ .+...+|++.|.|... . ..+.++ .+||++|+||.|...
T Consensus 245 ~~v~~l~~---~~~d~iIvLsH~g~~~----------d---~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 245 EAVDKARA---EGANAVVLLSHNGMQL----------D---AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HHHHHHHH---TTCSEEEEEECSCHHH----------H---HHHHTTSSSCCEEEECSSCCCC
T ss_pred HHHHHHHH---CCCCEEEEEeCCCCcc----------h---HHHHhcCCCCcEEEeCCCCCCC
Confidence 23333432 3567899999998521 0 133344 489999999999854
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=3.4e-06 Score=93.95 Aligned_cols=192 Identities=16% Similarity=0.167 Sum_probs=96.6
Q ss_pred cEEEEEEecCCCCCCCCCc----ccccCCChHHHHHHHHHHhhCCCccEEEE-eCCcccCCCcHHH---HHHHHHhhhhh
Q 046241 328 VLRFLTYGDMGKAPLDDSA----EHYIQPGSLSVIKAMADEVDNGSVDSIFH-IGDISYATGFLVE---WDFFLHQISPV 399 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~----~~~~~pg~~~~~~~l~~~i~~~~pDfvl~-~GDi~y~~g~~~~---wd~f~~~l~~l 399 (638)
.++|+.++|+|..-..... ......+....+..+++++++.+++.+++ +||++.. ..... .+...+.+..+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g-~~~~~~~~g~~~~~~ln~l 84 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTG-PYISSLTKGKAIIDIMNTM 84 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSS-SHHHHTTTTHHHHHHHTTS
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCC-chhhhhcCChHHHHHHHhc
Confidence 3999999999954321100 00112234566777777777777887766 9999853 21111 22333444332
Q ss_pred ccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCC---------CC-C--CCCeEEEEECCEE--EEEE
Q 046241 400 ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPI---------PA-R--DKPWYSIEQAGVH--FTVM 465 (638)
Q Consensus 400 ~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~---------~~-~--~~~yYsfd~G~v~--fi~L 465 (638)
-+-++++||||+++.. .+ ...+.+....|- .+ . .+.|..++.++++ |+.+
T Consensus 85 ---g~D~~tlGNHEfd~G~-~~------------l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~ 148 (509)
T 3ive_A 85 ---PFDAVTIGNHEFDHGW-DN------------TLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGL 148 (509)
T ss_dssp ---CCSEECCCGGGGTTCH-HH------------HHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEE
T ss_pred ---CCcEEeecccccccCH-HH------------HHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEec
Confidence 2346678999986531 00 000000000000 00 0 2346677888854 5555
Q ss_pred eCCC-----CCC------CcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCC------HHHHHHHHHHHHh-C
Q 046241 466 STEH-----DWS------ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVD------NKFVDAVEPLLLD-N 527 (638)
Q Consensus 466 DT~~-----~~~------~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~------~~~r~~l~~Ll~k-~ 527 (638)
.+.. .+. .-....+.+++.+++... +...+|++.|.+.-........ .... ..+.++ .
T Consensus 149 t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~ 224 (509)
T 3ive_A 149 HGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVK 224 (509)
T ss_dssp ECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCS
T ss_pred ccCcccccccccccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCccccccccccccccchH---HHHHhcCC
Confidence 3310 000 012233445554444432 3778999999885322211110 0111 122333 3
Q ss_pred CCeEEEEcccccc
Q 046241 528 KVDLALFGHVHNY 540 (638)
Q Consensus 528 ~VdlvlsGH~H~Y 540 (638)
+||++|+||.|..
T Consensus 225 giDlIlgGHtH~~ 237 (509)
T 3ive_A 225 GLDILITGHAHVG 237 (509)
T ss_dssp SCCEEEEESSCCC
T ss_pred CCcEEEeCCcCcc
Confidence 7999999999964
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.9e-06 Score=97.39 Aligned_cols=185 Identities=15% Similarity=0.134 Sum_probs=94.4
Q ss_pred cEEEEEEecCCCCCCCCCc-------ccccCCChHHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHH--HHHHHHHhhh
Q 046241 328 VLRFLTYGDMGKAPLDDSA-------EHYIQPGSLSVIKAMADEVDNGSVD-SIFHIGDISYATGFLV--EWDFFLHQIS 397 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~-------~~~~~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~--~wd~f~~~l~ 397 (638)
.++|+.++|+|..-..... ......+....+..+++++++.+++ ++|.+||++....... ..+...+.|.
T Consensus 12 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln 91 (579)
T 3ztv_A 12 ELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVMN 91 (579)
T ss_dssp EEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHHH
T ss_pred EEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHHH
Confidence 4999999999954322100 0000123355566666766665666 8899999995431111 1223334444
Q ss_pred hhccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCC--------CC-----CCCCeEEEEECCEE--E
Q 046241 398 PVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPI--------PA-----RDKPWYSIEQAGVH--F 462 (638)
Q Consensus 398 ~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~--------~~-----~~~~yYsfd~G~v~--f 462 (638)
.+ .. -+.++||||+++.. +....+.+....|- .+ .-..|..++.++++ |
T Consensus 92 ~l--g~-D~~tlGNHEfd~G~-------------~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgv 155 (579)
T 3ztv_A 92 AG--NF-HYFTLGNHEFDAGN-------------EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAI 155 (579)
T ss_dssp HH--TC-SEEECCSGGGTTHH-------------HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEE
T ss_pred hc--Cc-CeeeccccccccCH-------------HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEE
Confidence 33 22 25679999986421 00001111111110 00 01246677888854 5
Q ss_pred EEEeC-C-----CCCCC---cHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh-CCCeEE
Q 046241 463 TVMST-E-----HDWSE---NSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD-NKVDLA 532 (638)
Q Consensus 463 i~LDT-~-----~~~~~---~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k-~~Vdlv 532 (638)
|.+.+ . ..... -....+-+++.+++........+|+++|.+... ... +..+ .+||++
T Consensus 156 iG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~----------d~~---la~~~~giDlI 222 (579)
T 3ztv_A 156 IGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK----------NIE---IAQKVNDIDVI 222 (579)
T ss_dssp EEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH----------HHH---HHHHCSSCCEE
T ss_pred EEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh----------hHH---HHHhCCCCCEE
Confidence 66643 1 00000 112233444444443324467799999987421 112 2222 379999
Q ss_pred EEccccccc
Q 046241 533 LFGHVHNYE 541 (638)
Q Consensus 533 lsGH~H~Ye 541 (638)
|.||.|...
T Consensus 223 lgGHtH~~~ 231 (579)
T 3ztv_A 223 VTGDSHYLY 231 (579)
T ss_dssp EECSSCCEE
T ss_pred EeCCCCccc
Confidence 999999866
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.06 E-value=4.9e-05 Score=77.80 Aligned_cols=175 Identities=13% Similarity=0.077 Sum_probs=90.5
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC-CCccEEEEeCCcccCC-CcHHHHHHHHHhhhhhccCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN-GSVDSIFHIGDISYAT-GFLVEWDFFLHQISPVASRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfvl~~GDi~y~~-g~~~~wd~f~~~l~~l~~~vP~~ 406 (638)
+|++++||++.. || ...+..+++++++ .++|+++..||.+... +.. ....+.+..+ ..- .
T Consensus 5 m~ilf~GDv~G~-----------~G-~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~D-a 66 (281)
T 1t71_A 5 IKFIFLGDVYGK-----------AG-RNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVN-Y 66 (281)
T ss_dssp CEEEEECEEBHH-----------HH-HHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCC-E
T ss_pred EEEEEECCcCCh-----------HH-HHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCC-E
Confidence 899999999832 22 2233334444433 3689999999998543 222 2222333322 233 4
Q ss_pred EecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCC----CCCCeEEEEECCEE--EEEEeCCCCCC--CcHHHH
Q 046241 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPA----RDKPWYSIEQAGVH--FTVMSTEHDWS--ENSEQY 478 (638)
Q Consensus 407 ~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~----~~~~yYsfd~G~v~--fi~LDT~~~~~--~~~~Q~ 478 (638)
.+.||||+++.. ..+..-+.. . ...--++|... .++.|.-++.++++ ++.+-+...+. .-..-+
T Consensus 67 ~TlGNHefD~g~---~~~~~l~~~---~--~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf 138 (281)
T 1t71_A 67 ITMGNHTWFQKL---DLAVVINKK---D--LVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPF 138 (281)
T ss_dssp EECCTTTTCCGG---GHHHHTTCT---T--EECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHH
T ss_pred EEEccCcccCCc---cHHHHhhhc---C--EEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHH
Confidence 467999997541 010000000 0 00001112111 24567778888754 45554443122 122234
Q ss_pred HHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 479 EWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 479 ~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
+.+++.++ +.+.+.+||.+|--. ..+ .+.+.. .-.-+||+++.||.|....
T Consensus 139 ~~a~~~v~---~~~~diIIv~~H~g~--------t~E-k~~la~-~~dg~VD~VvGgHTHv~t~ 189 (281)
T 1t71_A 139 KVLKELIL---KRDCDLHIVDFHAET--------TSE-KNAFCM-AFDGYVTTIFGTHTHVPSA 189 (281)
T ss_dssp HHHHHHHT---TCCCSEEEEEEECSC--------HHH-HHHHHH-HHTTTSSEEEEESSSSCCT
T ss_pred HHHHHHHh---hcCCCEEEEEeCCCc--------hHH-HHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 45666665 356788999999421 111 112222 1234699999999998653
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=6.7e-05 Score=79.14 Aligned_cols=54 Identities=13% Similarity=0.135 Sum_probs=32.9
Q ss_pred cEEEEEEecCCCCCCCCC--cccccCCChHHHHHHHHHHhhCCCcc-EEEEeCCccc
Q 046241 328 VLRFLTYGDMGKAPLDDS--AEHYIQPGSLSVIKAMADEVDNGSVD-SIFHIGDISY 381 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y 381 (638)
.++|+..+|+|..-.... .......+....+..+++++++.+++ ++|.+||++.
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~q 67 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQ 67 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSC
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCC
Confidence 399999999996532110 00011223455666666766655555 6678999994
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00026 Score=71.48 Aligned_cols=173 Identities=14% Similarity=0.087 Sum_probs=90.7
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCC-CcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT-GFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~-g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
+|++++||.=. .+| ...++.+++++++.. |+++..|+.+... +... ...+.+..+ ..-. .
T Consensus 1 m~ilf~GDv~g-----------~~G-~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~~--G~Da-~ 61 (255)
T 1t70_A 1 MRVLFIGDVFG-----------QPG-RRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALEA--GAGC-L 61 (255)
T ss_dssp CEEEEECCBBH-----------HHH-HHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHHH--TCSE-E
T ss_pred CEEEEEeccCC-----------hHH-HHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHhC--CCCE-E
Confidence 58999999641 112 345566666666666 9999988887443 3322 122223222 3333 4
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchh-c-cccccCC-CCCCCCCeEEEEECCEE--EEEEeCCCCCCCcHHHHHHHH
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVA-Y-ETYFPMP-IPARDKPWYSIEQAGVH--FTVMSTEHDWSENSEQYEWMK 482 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~-y-~~~f~~P-~~~~~~~yYsfd~G~v~--fi~LDT~~~~~~~~~Q~~WL~ 482 (638)
+.||||++... ....-+. .. + ..--++| ....++.|.-++.++.+ ++.|-+......-..-++-++
T Consensus 62 TlGNHefD~~~----l~~~l~~-----~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~ 132 (255)
T 1t70_A 62 TLGNHAWHHKD----IYPMLSE-----DTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMD 132 (255)
T ss_dssp ECCTTTTSSTT----HHHHHHT-----TCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHH
T ss_pred EeccccccCch----HHHHHhh-----CCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHH
Confidence 66999997431 0000000 00 0 0001112 22234567778888754 455544422212222344566
Q ss_pred HHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 483 KDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 483 ~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
+.+++. +.+.+||.+|--. ..+ .+.+.. .-.-+||+++.||.|....
T Consensus 133 ~~v~~l---~~d~IIv~~H~e~--------t~E-k~~la~-~~dg~vd~VvGgHTHv~~~ 179 (255)
T 1t70_A 133 ALLERD---DLGTVFVDFHAEA--------TSE-KEAMGW-HLAGRVAAVIGTHTHVPTA 179 (255)
T ss_dssp HHTTCS---SCCEEEEEEECSC--------HHH-HHHHHH-HHTTSSSEEEEESSCSCBS
T ss_pred HHHHHh---CCCEEEEEeCCCC--------hHH-HHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 666654 4678999999421 111 112222 2234699999999998654
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00023 Score=71.64 Aligned_cols=167 Identities=17% Similarity=0.221 Sum_probs=90.1
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCC-CcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT-GFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~-g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
+|++++||.=.. || ...+..+++++++.. |+++..|..+..+ +.. +...+.+..+ ..-.+
T Consensus 1 m~ilfiGDi~g~-----------~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~~--G~D~~- 61 (252)
T 2z06_A 1 MRVLFIGDVMAE-----------PG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLREA--GVDLV- 61 (252)
T ss_dssp CEEEEECCBCHH-----------HH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHHH--TCCEE-
T ss_pred CEEEEEEecCCc-----------cc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHhC--CCCEE-
Confidence 589999996321 22 345566666666666 9988877666332 222 1222233322 34444
Q ss_pred ecCCCccCCCCCCCCcccCCCCCCccchhccc------cccCCCCCCCCCeEEEEECCEEEEEEe--CCCCCCCcHHHHH
Q 046241 408 AIGNHERDYLGSSGSVYESPDSGGECGVAYET------YFPMPIPARDKPWYSIEQAGVHFTVMS--TEHDWSENSEQYE 479 (638)
Q Consensus 408 v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~------~f~~P~~~~~~~yYsfd~G~v~fi~LD--T~~~~~~~~~Q~~ 479 (638)
+.||||++... . ..|.+ --++|....++.|.-++.++.++-+++ .......-..-++
T Consensus 62 T~GNHefD~~~----l-----------~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~ 126 (252)
T 2z06_A 62 SLGNHAWDHKE----V-----------YALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFR 126 (252)
T ss_dssp ECCTTTTSCTT----H-----------HHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHH
T ss_pred EeccEeeECch----H-----------HHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHH
Confidence 77999997431 1 11111 112232223467888999887665554 3321111122233
Q ss_pred HHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccce
Q 046241 480 WMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYER 542 (638)
Q Consensus 480 WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 542 (638)
-+++.+++.. .+.+|+.+|--.. .+ .+.+. .+-.-+||+++.||+|....
T Consensus 127 ~~~~~v~~lk---~d~IIv~~H~g~t--------se-k~~la-~~~dg~Vd~VvGgHTHv~t~ 176 (252)
T 2z06_A 127 ALDRLLEEEK---ADYVLVEVHAEAT--------SE-KMALA-HYLDGRASAVLGTHTHVPTL 176 (252)
T ss_dssp HHHHHHHHCC---CSEEEEEEECSCH--------HH-HHHHH-HHHBTTBSEEEEESSCSCBS
T ss_pred HHHHHHHHhC---CCEEEEEeCCCcH--------HH-HHHHH-HhCCCCeEEEEcCCCCcCCC
Confidence 3555555432 6789999995421 11 11222 22335799999999998543
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00014 Score=81.62 Aligned_cols=190 Identities=14% Similarity=0.124 Sum_probs=90.5
Q ss_pred cEEEEEEecCCCCCCCCCcc-ccc-CCChHHHHHHHHHHh-hCCCcc-EEEEeCCcccCCCcHH----HHHHHHHhhhhh
Q 046241 328 VLRFLTYGDMGKAPLDDSAE-HYI-QPGSLSVIKAMADEV-DNGSVD-SIFHIGDISYATGFLV----EWDFFLHQISPV 399 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~-~~~-~pg~~~~~~~l~~~i-~~~~pD-fvl~~GDi~y~~g~~~----~wd~f~~~l~~l 399 (638)
.++|+.++|+|........+ .+. .-|....+...+++. ++.+++ ++|.+||++....... ..+...+.+..+
T Consensus 15 ~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~l 94 (557)
T 3c9f_A 15 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQ 94 (557)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTS
T ss_pred EEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHhc
Confidence 49999999999754221100 000 111122233333332 236788 5789999994321111 111223333332
Q ss_pred ccCcceEEecCCCccCCCCCCC-CcccCCCCCCccchhccccccCC---CC-------C----CCCCeEEEEE--CCEEE
Q 046241 400 ASRVSYMTAIGNHERDYLGSSG-SVYESPDSGGECGVAYETYFPMP---IP-------A----RDKPWYSIEQ--AGVHF 462 (638)
Q Consensus 400 ~~~vP~~~v~GNHD~~~~~~sg-s~y~~~ds~ge~~~~y~~~f~~P---~~-------~----~~~~yYsfd~--G~v~f 462 (638)
..- +.++||||+++.. .+ ..+ ....+....| .| + ..+.|..++. +++++
T Consensus 95 --g~D-a~tlGNHEfD~G~-~~l~~~----------~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kI 160 (557)
T 3c9f_A 95 --DYD-LLTIGNHELYLWE-NSKQEY----------ETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRV 160 (557)
T ss_dssp --CCS-EECCCGGGSSSHH-HHHHHH----------HHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEE
T ss_pred --CCC-EEeecchhcccch-HHHHHH----------HHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEE
Confidence 233 5688999996421 00 000 0000011111 01 0 0234667787 77554
Q ss_pred --EEEeCCCCCC-----C-cHHH---HHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHh--CCC
Q 046241 463 --TVMSTEHDWS-----E-NSEQ---YEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLD--NKV 529 (638)
Q Consensus 463 --i~LDT~~~~~-----~-~~~Q---~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k--~~V 529 (638)
|.+.+..... . ...+ .+|+++.++ .+...+|+++|.+.... .+.. ......+.+ .++
T Consensus 161 giiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~----~d~~--~~~~~~lA~~~~gi 230 (557)
T 3c9f_A 161 MAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHN----WGEF--YQVHQYLRQFFPDT 230 (557)
T ss_dssp EEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTT----TCHH--HHHHHHHHHHCTTS
T ss_pred EEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCcccc----Cccc--cHHHHHHHHhCCCC
Confidence 5554431100 0 1112 146665553 35778999999886300 1111 122222333 589
Q ss_pred eE-EEEccccccc
Q 046241 530 DL-ALFGHVHNYE 541 (638)
Q Consensus 530 dl-vlsGH~H~Ye 541 (638)
|+ +|.||.|...
T Consensus 231 DilIlgGHtH~~~ 243 (557)
T 3c9f_A 231 IIQYFGGHSHIRD 243 (557)
T ss_dssp EEEEEECSSCCEE
T ss_pred CEEEECCCCCCCC
Confidence 95 9999999973
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00026 Score=74.57 Aligned_cols=54 Identities=13% Similarity=0.139 Sum_probs=34.3
Q ss_pred cEEEEEEecCCCCCCCC--CcccccCCChHHHHHHHHHHhhCCCcc-EEEEeCCccc
Q 046241 328 VLRFLTYGDMGKAPLDD--SAEHYIQPGSLSVIKAMADEVDNGSVD-SIFHIGDISY 381 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~--~~~~~~~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y 381 (638)
.++|+..+|+|..-... ........+....+..+++++++.+++ ++|.+||++.
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~q 64 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQ 64 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSS
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCC
Confidence 39999999999753210 000011224456667777777666666 7788999994
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00034 Score=78.06 Aligned_cols=190 Identities=14% Similarity=0.121 Sum_probs=91.1
Q ss_pred EEEEEEecCCCCCCCCCc------ccccCCChHHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHH--HHHHHHHhhhhh
Q 046241 329 LRFLTYGDMGKAPLDDSA------EHYIQPGSLSVIKAMADEVDNGSVD-SIFHIGDISYATGFLV--EWDFFLHQISPV 399 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~------~~~~~pg~~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~--~wd~f~~~l~~l 399 (638)
++|+.+.|+|..-..... .....-|....+..+++++++.+++ ++|.+||++....... +.....+.|..+
T Consensus 4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~l 83 (530)
T 4h1s_A 4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNAL 83 (530)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHHT
T ss_pred EEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhcc
Confidence 899999999964321100 0000112345566666666655565 6777999995331111 111222233222
Q ss_pred ccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhcc--ccc-cCC----CCCCCCCeEEEEECCEE--EEEEeCCC-
Q 046241 400 ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYE--TYF-PMP----IPARDKPWYSIEQAGVH--FTVMSTEH- 469 (638)
Q Consensus 400 ~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~--~~f-~~P----~~~~~~~yYsfd~G~v~--fi~LDT~~- 469 (638)
. .=..++||||+++.. . ..... ...++.-++. +.. .-+ ....-..|.-++.++++ ||.+-+..
T Consensus 84 g---yDa~~lGNHEFd~G~-~-~l~~~--~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~~ 156 (530)
T 4h1s_A 84 R---YDAMALGNHEFDNGV-E-GLIEP--LLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKET 156 (530)
T ss_dssp T---CCEEECCGGGGTTTT-H-HHHTT--TTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTTH
T ss_pred C---CCEEEEchhhhccCH-H-HHHHH--HHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccce
Confidence 1 125689999997532 0 00000 0000000110 000 000 00011357778888855 55555532
Q ss_pred -----C-----CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhC-CCeEEEEcccc
Q 046241 470 -----D-----WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN-KVDLALFGHVH 538 (638)
Q Consensus 470 -----~-----~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H 538 (638)
. +...-+..+...+.|++ .+...+|++.|...- .- ..+.++. +||+++.||.|
T Consensus 157 ~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~----------~d---~~la~~v~giD~IlgGHsH 220 (530)
T 4h1s_A 157 PFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE----------MD---KLIAQKVRGVDVVVGGHSN 220 (530)
T ss_dssp HHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH----------HH---HHHHHHSTTCCEEECCSSC
T ss_pred eeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch----------HH---HHHHhcCCCCCeeccCCcc
Confidence 0 11112223333334443 456779999996531 11 1233333 89999999999
Q ss_pred ccc
Q 046241 539 NYE 541 (638)
Q Consensus 539 ~Ye 541 (638)
..-
T Consensus 221 ~~~ 223 (530)
T 4h1s_A 221 TFL 223 (530)
T ss_dssp CCB
T ss_pred cee
Confidence 754
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0003 Score=69.08 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=45.3
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC-CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN-GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
.+++++||+|.. ...+.++++.+.. .++|.++++||+++...... +..+.+. ..+++.
T Consensus 13 ~~i~visDiHg~--------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~---~~~~~l~----~~~~~~ 71 (221)
T 1g5b_A 13 RNIWVVGDLHGC--------------YTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV---ECLELIT----FPWFRA 71 (221)
T ss_dssp SCEEEECCCTTC--------------HHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH---HHHGGGG----STTEEE
T ss_pred ceEEEEEcCCCC--------------HHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH---HHHHHHh----cCCEEE
Confidence 789999999942 3456667776654 37899999999996432221 2222222 358999
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 72 v~GNhd~ 78 (221)
T 1g5b_A 72 VRGNHEQ 78 (221)
T ss_dssp CCCHHHH
T ss_pred EccCcHH
Confidence 9999996
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00064 Score=69.61 Aligned_cols=67 Identities=18% Similarity=0.221 Sum_probs=45.2
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC-CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN-GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
++++++||+|.. ...+.++++.+.. .++|.++++||+++...... +.++.+..+ ..+++.
T Consensus 1 M~i~vigDiHG~--------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l--~~~~~~ 61 (280)
T 2dfj_A 1 MATYLIGDVHGC--------------YDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSL--GDSVRL 61 (280)
T ss_dssp -CEEEECCCCSC--------------HHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHT--GGGEEE
T ss_pred CeEEEEecCCCC--------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhC--CCceEE
Confidence 478999999942 3456677776654 57899999999996433222 223333333 237999
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 62 v~GNHe~ 68 (280)
T 2dfj_A 62 VLGNHDL 68 (280)
T ss_dssp CCCHHHH
T ss_pred EECCCcH
Confidence 9999996
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00057 Score=69.24 Aligned_cols=65 Identities=17% Similarity=0.267 Sum_probs=45.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
.|++++||+|.. ...++++++.+...++ |.++++||+++...... +.++.+. ..+++.
T Consensus 19 ~~i~visDiHg~--------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~---~~l~~l~----~~~~~~ 77 (262)
T 2qjc_A 19 GRVIIVGDIHGC--------------RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF---GVVRLLK----RLGAYS 77 (262)
T ss_dssp SCEEEECCCTTC--------------HHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH---HHHHHHH----HHTCEE
T ss_pred CeEEEEeCCCCC--------------HHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH---HHHHHHH----HCCCEE
Confidence 489999999932 3456677777665555 99999999996432222 1223332 247999
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 78 v~GNHd~ 84 (262)
T 2qjc_A 78 VLGNHDA 84 (262)
T ss_dssp CCCHHHH
T ss_pred EeCcChH
Confidence 9999996
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.017 Score=49.35 Aligned_cols=93 Identities=16% Similarity=0.187 Sum_probs=56.7
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEE
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHT 288 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~ 288 (638)
..|..+.+.......+++.|+|...... .-.|+|......... .+... . ..+-...
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~------~-----------~~~~~~~ 70 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPID--DWIME------T-----------ISGDRLT 70 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTT--TSEEE------E-----------EETTCCE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCcc--ceEEE------E-----------ECCCceE
Confidence 5677777776543468999999876432 235667542211000 00000 0 0011236
Q ss_pred EEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCCCC
Q 046241 289 AVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAGGS 325 (638)
Q Consensus 289 a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~~~ 325 (638)
+.|++|+|+|.|.+||..-+ ..||....|+|.+.+..
T Consensus 71 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 71 HQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 78999999999999997632 24788899999876544
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.012 Score=52.08 Aligned_cols=86 Identities=17% Similarity=0.217 Sum_probs=54.1
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC---------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCC
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE---------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDP 283 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~---------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~ 283 (638)
|..|..+++.... .+++.|+|...... .-.|+|............. +
T Consensus 19 p~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~-------------~--------- 74 (123)
T 2edd_A 19 MLPPVGVQAVALT--HDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSE-------------D--------- 74 (123)
T ss_dssp SCCCEEEEEEEEE--TTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCE-------------E---------
T ss_pred CCCCcceEEEEcC--CCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEE-------------e---------
Confidence 4577777766543 58999999954321 2356775421100000000 0
Q ss_pred ceEEEEEEcCCCCCcEEEEEEeeC----CCCcceeeEEECCCC
Q 046241 284 GYIHTAVMTGLRPSATFSYRYGSD----LVGWSDKIQFKTPPA 322 (638)
Q Consensus 284 g~~h~a~l~gL~P~T~Y~Yrvg~~----~~~~S~~~sF~T~p~ 322 (638)
.....++|+||+|+|.|.++|... ...||....|+|.+.
T Consensus 75 ~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 75 TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp ESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 012367999999999999999763 235888999999876
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0077 Score=51.37 Aligned_cols=38 Identities=18% Similarity=0.445 Sum_probs=30.6
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAGGS 325 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~~~ 325 (638)
.+.|++|+|+|.|.+||..-+ ..||+...|+|++.++.
T Consensus 67 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 67 RATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 578999999999999997521 25788999999876543
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.014 Score=50.74 Aligned_cols=86 Identities=16% Similarity=0.218 Sum_probs=54.1
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC---------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCC
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE---------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDP 283 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~---------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~ 283 (638)
|..|..++..... .+++.|+|...... .-.|+|........... + ..
T Consensus 9 p~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~-~------------~~--------- 64 (113)
T 1x5j_A 9 MMPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYK-N------------AN--------- 64 (113)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCE-E------------CC---------
T ss_pred CCCCcceEEEEec--CCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEE-E------------Ee---------
Confidence 4578777776653 58999999864321 23567764211000000 0 00
Q ss_pred ceEEEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 284 GYIHTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 284 g~~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
+-...++|+||+|+|.|.++|..-. ..||+...++|.+.
T Consensus 65 ~~~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 65 ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp BCSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCcCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 1123689999999999999997632 25888888999765
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.018 Score=48.92 Aligned_cols=87 Identities=18% Similarity=0.299 Sum_probs=52.3
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+++.... .+++.|+|....... -.|+|............. .+-..
T Consensus 8 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----------------------~~~~~ 63 (108)
T 2djs_A 8 PSTVPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMA----------------------RSQTN 63 (108)
T ss_dssp CCCCSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEE----------------------EESSS
T ss_pred CCCCcceEEEecC--CCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEE----------------------ecCcc
Confidence 4566666665443 579999998754322 235554322110000000 01113
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
.+.|+||+|+|.|.+||..-+ ..||+...|+|++..
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 578999999999999997632 247788899998764
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.019 Score=62.58 Aligned_cols=181 Identities=14% Similarity=0.150 Sum_probs=94.5
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHh-----------hCCCccEEEEeCCcccCCCc-----------
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEV-----------DNGSVDSIFHIGDISYATGF----------- 385 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i-----------~~~~pDfvl~~GDi~y~~g~----------- 385 (638)
..++++++|+|.+..... ....++.+.+.+ ...++.-+|++||.+...+.
T Consensus 200 ~~~ialVSGL~igs~~~~--------~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~ 271 (476)
T 3e0j_A 200 DRFVLLVSGLGLGGGGGE--------SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYL 271 (476)
T ss_dssp CCEEEEECCCCBTSSCHH--------HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------C
T ss_pred CCEEEEECCcccCCCccc--------chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhcc
Confidence 378999999999764210 012223332222 23578899999999965321
Q ss_pred --------HHHHHHHHHhhhhhccCcceEEecCCCccCCCCCCCCcccCCCCCCccc---hhccccccCCCCCCCCCeEE
Q 046241 386 --------LVEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECG---VAYETYFPMPIPARDKPWYS 454 (638)
Q Consensus 386 --------~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~---~~y~~~f~~P~~~~~~~yYs 454 (638)
..+.+.+-+.+..+...+|+.+.|||||-.... ...+.-....+ ..|. .+..- .++ |.
T Consensus 272 ~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~-----lPQqplh~~lfp~s~~~~-~~~~v----tNP-~~ 340 (476)
T 3e0j_A 272 TKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYT-----LPQQPLHPCMFPLATAYS-TLQLV----TNP-YQ 340 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSS-----SSCCCCCTTSCHHHHTST-TEEEC----CSS-EE
T ss_pred ccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCccccc-----CCCCCcCHHHhhhhhhcC-ccEEe----CCC-eE
Confidence 023344445566667899999999999963111 10000000000 0110 11111 233 56
Q ss_pred EEECCEEEEEEeCCC--C---CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCC-ccCCCCCCCHHHHHHHHHHHHhCC
Q 046241 455 IEQAGVHFTVMSTEH--D---WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPM-YSSLSSSVDNKFVDAVEPLLLDNK 528 (638)
Q Consensus 455 fd~G~v~fi~LDT~~--~---~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~-yss~~~~~~~~~r~~l~~Ll~k~~ 528 (638)
|++++++|++..... + +...+.-++.|++.|+. | |--+ +....+-. +. ..-.++.-+.-
T Consensus 341 ~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw--r----------HlAPTaPdTl~~y-P~--~~~DpfVi~~~ 405 (476)
T 3e0j_A 341 ATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV--R----------HISPTAPDTLGCY-PF--YKTDPFIFPEC 405 (476)
T ss_dssp EEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB--T----------CSCTTSCCC---------CCSCTTSCSSC
T ss_pred EEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH--h----------ccCCCCCCceeec-cC--CCCCceeecCC
Confidence 999999998876431 0 11233456788888874 1 2211 11110000 00 00012233455
Q ss_pred CeEEEEccccccce
Q 046241 529 VDLALFGHVHNYER 542 (638)
Q Consensus 529 VdlvlsGH~H~YeR 542 (638)
.+++++||.|.|+-
T Consensus 406 PhVyf~Gnq~~f~t 419 (476)
T 3e0j_A 406 PHVYFCGNTPSFGS 419 (476)
T ss_dssp CSEEEEEEESSCEE
T ss_pred CcEEEeCCCCccce
Confidence 78999999999985
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0059 Score=63.27 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=45.1
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhc--cCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVA--SRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~--~~vP~~ 406 (638)
.+++++||+|.. ...+.++.+.+.....+.++++||+++.+....+ .+..+..+. ..-.++
T Consensus 50 ~~i~viGDIHG~--------------~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~ 112 (309)
T 2ie4_C 50 CPVTVCGDVHGQ--------------FHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRERIT 112 (309)
T ss_dssp SSEEEECCCTTC--------------HHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEE
T ss_pred CCEEEEecCCCC--------------HHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH---HHHHHHHHHhhCCCcEE
Confidence 569999999942 3455667666655567788999999965433222 122222221 123589
Q ss_pred EecCCCccC
Q 046241 407 TAIGNHERD 415 (638)
Q Consensus 407 ~v~GNHD~~ 415 (638)
.+.||||..
T Consensus 113 ~lrGNHE~~ 121 (309)
T 2ie4_C 113 ILRGNHESR 121 (309)
T ss_dssp ECCCTTSST
T ss_pred EEeCCCCHH
Confidence 999999974
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0052 Score=64.65 Aligned_cols=71 Identities=15% Similarity=0.153 Sum_probs=44.2
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC--------CCccEEEEeCCcccCCCcHHH-HHHHHHhhhh-
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN--------GSVDSIFHIGDISYATGFLVE-WDFFLHQISP- 398 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--------~~pDfvl~~GDi~y~~g~~~~-wd~f~~~l~~- 398 (638)
.+++++||+|.. ...+.++.+.+.. .++|.++++||+++.+....+ .+...+ ++.
T Consensus 71 ~~i~vigDiHG~--------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~-l~~~ 135 (342)
T 2z72_A 71 KKVVALSDVHGQ--------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQ-LDQQ 135 (342)
T ss_dssp CEEEEECCCTTC--------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHH-HHHH
T ss_pred CCEEEEECCCCC--------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHH-HHHH
Confidence 789999999942 3445566655431 157999999999965433222 222221 211
Q ss_pred -hccCcceEEecCCCcc
Q 046241 399 -VASRVSYMTAIGNHER 414 (638)
Q Consensus 399 -l~~~vP~~~v~GNHD~ 414 (638)
.....+++.+.||||.
T Consensus 136 ~~~~~~~v~~v~GNHE~ 152 (342)
T 2z72_A 136 ARDAGGMVHLLMGNHEQ 152 (342)
T ss_dssp HHHTTCEEEECCCHHHH
T ss_pred HhhCCCeEEEEecCCcH
Confidence 1224568999999996
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.045 Score=47.13 Aligned_cols=89 Identities=17% Similarity=0.194 Sum_probs=54.3
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCC-CC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGD-KE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~-~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
.|..|..+++.... .+++.|.|.... .. .-.|+|.......... .. . .. +-
T Consensus 17 ~P~~P~~l~~~~~~--~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~--~~--------~--~~---------~~ 73 (120)
T 1x5f_A 17 LPSAPRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERV--EN--------T--SH---------PG 73 (120)
T ss_dssp CCCCCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEE--EE--------C--SS---------TT
T ss_pred CCCCCCCcEEEecC--CCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceE--EE--------e--cc---------CC
Confidence 35677777766543 578999999754 21 1357775432211100 00 0 00 11
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCCC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPAG 323 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~~ 323 (638)
...+.|+||+|+|.|.+||..-+ . .||+...|+|.+..
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 115 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPES 115 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCC
Confidence 23578999999999999997632 2 46788889997643
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.018 Score=49.14 Aligned_cols=87 Identities=15% Similarity=0.227 Sum_probs=53.1
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCC-CccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGK-SETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~-~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
|..|..+++.... .+++.|+|...... .-.|+|.... .......... . ..
T Consensus 8 P~~p~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~-------------~-------~~-- 63 (109)
T 2e7h_A 8 PPAVSDIRVTRSS--PSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLK-------------T-------SE-- 63 (109)
T ss_dssp SCCCCCCEEEEEE--TTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEE-------------E-------SS--
T ss_pred CCCCCccEEEecC--CCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEc-------------c-------CC--
Confidence 4456666666543 57999999865432 1256665432 1110000000 0 01
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
..+.|+||+|+|.|.+||...+ ..||+...|+|.+.+
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 64 NRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp SEEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred CEEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 2678999999999999997632 247888899998754
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0097 Score=62.19 Aligned_cols=69 Identities=13% Similarity=0.088 Sum_probs=44.7
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhh--ccCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPV--ASRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l--~~~vP~~ 406 (638)
.+++++||+|. ....+.++.+.+.....|-++++||+++.+....+ .+..+..+ ...-.++
T Consensus 57 ~~i~viGDIHG--------------~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 57 APLKICGDIHG--------------QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFF 119 (330)
T ss_dssp SSEEEECBCTT--------------CHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEE
T ss_pred CceEEecCCCC--------------CHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHH---HHHHHHHhhhhcCCceE
Confidence 46899999994 34556677776655566789999999965433222 12222221 1234589
Q ss_pred EecCCCcc
Q 046241 407 TAIGNHER 414 (638)
Q Consensus 407 ~v~GNHD~ 414 (638)
.+.||||.
T Consensus 120 ~lrGNHE~ 127 (330)
T 1fjm_A 120 LLRGNHEC 127 (330)
T ss_dssp ECCCTTSS
T ss_pred EecCCchH
Confidence 99999996
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.047 Score=46.32 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=27.6
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~ 322 (638)
..+++||+|+|.|.|||..-+ . .+|+...++|.+.
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 568899999999999998643 2 3677788888764
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.078 Score=45.48 Aligned_cols=37 Identities=14% Similarity=0.236 Sum_probs=29.7
Q ss_pred EEEEcCCCCCcEEEEEEeeC----CCCcceeeEEECCCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSD----LVGWSDKIQFKTPPAGG 324 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~----~~~~S~~~sF~T~p~~~ 324 (638)
.++|+||+|+|.|.+||..- ...+|+...|+|.+.+.
T Consensus 70 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 70 WHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp EEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred EEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 57899999999999999752 22578889999986543
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.014 Score=60.14 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=44.7
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
.+++++||+|. +...+.++.+.+.....+-++++||+++.+....+-=.++..++ +...-.++.+
T Consensus 56 ~~i~viGDIHG--------------~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk-~~~p~~v~~l 120 (299)
T 3e7a_A 56 APLKICGDIHG--------------QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK-IKYPENFFLL 120 (299)
T ss_dssp SSEEEECBCTT--------------CHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHH-HHSTTTEEEC
T ss_pred CCEEEEecCCC--------------CHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHHHHHHHHHHH-hhCCCcEEEE
Confidence 35899999995 34556677776655666789999999965433222111111111 1123358999
Q ss_pred cCCCcc
Q 046241 409 IGNHER 414 (638)
Q Consensus 409 ~GNHD~ 414 (638)
.||||.
T Consensus 121 rGNHE~ 126 (299)
T 3e7a_A 121 RGNHEC 126 (299)
T ss_dssp CCTTSS
T ss_pred ecCchh
Confidence 999996
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.087 Score=44.55 Aligned_cols=85 Identities=18% Similarity=0.232 Sum_probs=52.4
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+++.......+++.|+|....... -.|+|....... +... ... ..
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~-----~~~~----------~~~---------~~ 63 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKM-----WASQ----------RAA---------SN 63 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSC-----CEEE----------EES---------SS
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCC-----eEEe----------cCC---------cc
Confidence 557877776664334689999999764322 245554322110 0000 000 12
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p 321 (638)
.+.|++|+|+|.|.+||..-+ ..||+...|+|.+
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 64 FTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 578999999999999997532 2478888899964
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.019 Score=59.56 Aligned_cols=71 Identities=17% Similarity=0.115 Sum_probs=42.2
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC-CccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG-SVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
.|++++||+|.. ...+.++.+.+... .-+.++++||+++.+....+--.++..++. ...-.++.
T Consensus 60 ~ri~viGDIHG~--------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~-~~p~~v~~ 124 (315)
T 3h63_A 60 EKITVCGDTHGQ--------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKL-LYPDHFHL 124 (315)
T ss_dssp CEEEEECCCTTC--------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHH-HSTTTEEE
T ss_pred ceEEEEecCCCC--------------HHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhh-hcCCcEEE
Confidence 789999999953 34455566655333 234699999999654332221111111111 11235888
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 125 lrGNHE~ 131 (315)
T 3h63_A 125 LRGNHET 131 (315)
T ss_dssp ECCTTSS
T ss_pred EecCccc
Confidence 9999995
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=95.82 E-value=0.11 Score=57.97 Aligned_cols=122 Identities=15% Similarity=0.132 Sum_probs=66.2
Q ss_pred EEEEEEeeeccc--eEEEEEecC---CCcceeeccccccccC-CCCCCceEEEeecCCCCCceEEEEEeCCCC-----Cc
Q 046241 175 SIKFHVINIRTD--IEFVFFAGG---FDTPCILNRTNPINFA-NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQ 243 (638)
Q Consensus 175 ~~~~~l~n~r~~--~~f~~f~~~---~~~~~~~~~s~~~~f~-~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~ 243 (638)
..++.|-+++.. |.|.+.... ...| -..+..+.+. .+..|..+.+.. ...++++|+|...... .-
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp--s~~s~~v~v~T~~~~Ps~~~~~~--~s~tSV~LsW~pP~~~ng~I~~Y 474 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVT--SRSFRTASVSINQTEPPKVRLEG--RSTTSLSVSWSIPPPQQSRVWKY 474 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCS--CCCEEEEEEECCSCCCCEEEEEE--CCC-CCEEEEECCTTTTTTCSEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCC--CCccceeEEeecccCCCCCceee--ccCCeEEEEEECCcCCCCcccEE
Confidence 345556666654 777776521 1111 1112222222 345677666633 3468999999965322 12
Q ss_pred EEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEEC
Q 046241 244 QVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKT 319 (638)
Q Consensus 244 ~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T 319 (638)
.|+|...... ...... + +-...++|+||+|+|.|.+||..-+ ..||+...|+|
T Consensus 475 ~V~y~~~~~~-~~~~~v-------------~---------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T 531 (536)
T 3fl7_A 475 EVTYRKKGDS-NSYNVR-------------R---------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531 (536)
T ss_dssp EEEEEEC--C-CCCEEE-------------E---------ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEEC
T ss_pred EEEEEECCCC-ceEEEE-------------c---------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEe
Confidence 5777543221 110110 0 1112578999999999999997532 24788999999
Q ss_pred CCCC
Q 046241 320 PPAG 323 (638)
Q Consensus 320 ~p~~ 323 (638)
++..
T Consensus 532 ~~~~ 535 (536)
T 3fl7_A 532 LSPE 535 (536)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8754
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.027 Score=47.82 Aligned_cols=34 Identities=29% Similarity=0.454 Sum_probs=27.9
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p 321 (638)
.++|+||+|+|.|.+||..-+ ..+|+...|+|.|
T Consensus 67 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 67 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 568999999999999997532 2478888999987
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.091 Score=43.89 Aligned_cols=87 Identities=24% Similarity=0.344 Sum_probs=52.3
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
|..|..+.+.... .++++|+|...... .-.|+|....... .+.. + .. ......
T Consensus 8 P~~P~~~~~~~~~--~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~----~~~~--------~-~~---------~~~~~~ 63 (106)
T 2dju_A 8 PKPPIDLVVTETT--ATSVTLTWDSGNSEPVTYYGIQYRAAGTEG----PFQE--------V-DG---------VATTRY 63 (106)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECCCSSCCSEEEEEEEETTCCS----CCCC--------B-CC---------CCSSEE
T ss_pred CcCCCCcEEEecc--CCEEEEEEcCCCCCCceEEEEEEEECCCCC----CeEE--------c-cC---------CCccEE
Confidence 5567777666543 47999999976322 2356675322110 0100 0 00 011246
Q ss_pred EEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 290 VMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
.|+||+|++.|.+||..-+ ..+|+...++|.+..
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 64 SIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 8899999999999997632 246778889987643
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.024 Score=59.20 Aligned_cols=71 Identities=13% Similarity=0.175 Sum_probs=43.3
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 407 (638)
.|++++||+|.. ...+.++.+.+..... +.++++||+++.+....+--.++..++. ...-.++.
T Consensus 64 ~ri~viGDIHG~--------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~-~~p~~v~l 128 (335)
T 3icf_A 64 VKISVCGDTHGQ--------------FYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKI-LHPNNFFL 128 (335)
T ss_dssp CEEEEECCCTTC--------------HHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHH-HCTTTEEE
T ss_pred ceEEEEecCCCC--------------HHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhh-hCCCcEEE
Confidence 899999999953 4455666666543333 4699999999654332221111111111 12345889
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 129 lrGNHE~ 135 (335)
T 3icf_A 129 NRGNHES 135 (335)
T ss_dssp CCCTTSS
T ss_pred ecCchhh
Confidence 9999995
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.14 Score=47.42 Aligned_cols=117 Identities=19% Similarity=0.162 Sum_probs=61.7
Q ss_pred EEEEeeeccc--eEEEEEec---CCCcceeeccccccccCCCCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcC
Q 046241 177 KFHVINIRTD--IEFVFFAG---GFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGD 249 (638)
Q Consensus 177 ~~~l~n~r~~--~~f~~f~~---~~~~~~~~~~s~~~~f~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~ 249 (638)
.+.|-+++.. |.|.+... +...|..+... ..|..|..+++... ..+++.|+|...... .-.|+|..
T Consensus 59 ~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~-----t~p~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~ 131 (186)
T 1qr4_A 59 SFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGS-----TVVGSPKGISFSDI--TENSATVSWTPPRSRVDSYRVSYVP 131 (186)
T ss_dssp EEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEE-----CCCCCCSCEEEESC--CSSCEEEEECCCSSCCSEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEE-----CCCCCCCccEEEEe--CCCEEEEEEECCCCcccEEEEEEEe
Confidence 4455555544 66666542 22233222211 23667776665543 358999999865432 23577754
Q ss_pred CCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEEeeC-CCCcce--eeEEECCCC
Q 046241 250 GKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSD-LVGWSD--KIQFKTPPA 322 (638)
Q Consensus 250 ~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~p~ 322 (638)
............ +-.....|+||+|++.|.++|... +.+.|+ ...|+|.|.
T Consensus 132 ~~~~~~~~~~~~----------------------~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 132 ITGGTPNVVTVD----------------------GSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp TTCCCCEEEEEE----------------------TTCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred CCCCCceEEEcC----------------------CCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 322111111110 111357899999999999999763 223343 456788764
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.054 Score=46.48 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=53.1
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
-|..|..+++.... .+++.|+|....... -.|+|.......... ... .. .-.
T Consensus 17 ~P~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~--~~~----------~~---------~~~ 73 (119)
T 2ed7_A 17 LPSAPRDVVPVLVS--SRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERA--LNT----------TQ---------PGS 73 (119)
T ss_dssp SCCCCSCCEEEEEC--SSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEE--EEC----------CC---------TTC
T ss_pred CCcCCcceEEEecC--CCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCccee--eEe----------ec---------CCc
Confidence 35677777776643 578999998654322 245554322111100 000 00 112
Q ss_pred EEEEEcCCCCCcEEEEEEeeC----CCCcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD----LVGWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~----~~~~S~~~sF~T~p~ 322 (638)
....|++|+|+|.|.+||..- ...||+...++|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 74 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp CEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 357899999999999999752 124788888999764
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=95.64 E-value=0.019 Score=60.35 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=44.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHH-HHHHHHhhhhhccCcceEE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVE-WDFFLHQISPVASRVSYMT 407 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~-wd~f~~~l~~l~~~vP~~~ 407 (638)
.+++++||+|.. ...+.++.+.......+-++++||+++.+....+ .+..+ .++. ...-.++.
T Consensus 70 ~pi~ViGDIHG~--------------~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~Evl~lL~-~lk~-~~p~~v~l 133 (357)
T 3ll8_A 70 APVTVCGDIHGQ--------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW-ALKI-LYPKTLFL 133 (357)
T ss_dssp SSEEEECCCTTC--------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHHHHHHHH-HHHH-HCTTTEEE
T ss_pred ccceeeccCCCC--------------HHHHHHHHHhcCCCCCcEEEECCCccCCCcChHHHHHHHH-Hhhh-hcCCcEEE
Confidence 358999999953 4455666666555667889999999965433222 12211 1111 11234889
Q ss_pred ecCCCcc
Q 046241 408 AIGNHER 414 (638)
Q Consensus 408 v~GNHD~ 414 (638)
+.||||.
T Consensus 134 lrGNHE~ 140 (357)
T 3ll8_A 134 LRGNHEC 140 (357)
T ss_dssp CCCTTSS
T ss_pred EeCchhh
Confidence 9999996
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.15 Score=42.86 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=51.6
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+++.... .++++|+|...... .-.|+|........ ..... . ..
T Consensus 8 P~~P~~l~~~~~~--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~--~~~~~-----------~-----------~~ 61 (106)
T 2ed8_A 8 PGPVENLQAVSTS--PTSILITWEPPAYANGPVQGYRLFCTEVSTGKE--QNIEV-----------D-----------GL 61 (106)
T ss_dssp CCCCEEEEEECSS--TTEEEEEEECCSSCSSCCCEEEEEEEETTTCCE--EEEEE-----------C-----------SS
T ss_pred CcCCceeEEEecC--CCEEEEEECCCCCCCCCeeEEEEEEEECCCCce--EEEeC-----------C-----------cc
Confidence 5577777766543 57999999966321 13566654322110 00000 0 02
Q ss_pred EEEEcCCCCCcEEEEEEeeCCC----CcceeeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDLV----GWSDKIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~~----~~S~~~sF~T~p~ 322 (638)
.+.|+||+|+|.|.+||..-+. .+|+...|+|...
T Consensus 62 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 62 SYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp CEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 4688999999999999976321 3677888998754
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.059 Score=45.93 Aligned_cols=86 Identities=17% Similarity=0.315 Sum_probs=51.3
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
|..|..+++... ..+++.|+|...... .-.|+|........ +. .. . +-...+
T Consensus 18 P~~P~~l~~~~~--~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~----------~~--~~------~-----~~~~~~ 72 (115)
T 1x5z_A 18 PGQPLNFKAEPE--SETSILLSWTPPRSDTIANYELVYKDGEHGEE----------QR--IT------I-----EPGTSY 72 (115)
T ss_dssp CCCCEEEEEECS--SSSEEEEEEECCSCCCCCEEEECBEESSSCCC----------BC--CE------E-----CSSSEE
T ss_pred CCCCccCEeeeC--CCCEEEEEEcCCCCCCccEEEEEEEeCCCCCc----------eE--Ee------c-----CCCcEE
Confidence 456766666543 368999999876442 12344443211100 00 00 0 001357
Q ss_pred EEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCCC
Q 046241 290 VMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPAG 323 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~~ 323 (638)
.|+||+|+|.|.+||..-+ . .||....|+|.+..
T Consensus 73 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 73 RLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp EEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred EECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 8999999999999997632 2 46788889998653
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.045 Score=46.82 Aligned_cols=37 Identities=27% Similarity=0.469 Sum_probs=30.6
Q ss_pred EEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCCCC
Q 046241 289 AVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAGGS 325 (638)
Q Consensus 289 a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~~~ 325 (638)
++|+||+|+|.|.+||...+ ..||+...|+|.+.++.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 78999999999999997632 25888899999887654
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.072 Score=45.17 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=28.8
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
...|+||+|+|.|.+||..-+ ..||+...|+|.+..
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 568899999999999997632 247888899998653
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=95.51 E-value=0.025 Score=61.86 Aligned_cols=70 Identities=17% Similarity=0.138 Sum_probs=43.4
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCC-ccEEEEeCCcccCCCcHHH-HHHHHHhhhhhccCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGS-VDSIFHIGDISYATGFLVE-WDFFLHQISPVASRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~-pDfvl~~GDi~y~~g~~~~-wd~f~~~l~~l~~~vP~~ 406 (638)
.+++++||+|.. ...+.++.+.+.... .|.++++||+++.+....+ .+..+. ++ +.....++
T Consensus 213 ~~~~vigDiHG~--------------~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~-l~-~~~~~~~~ 276 (477)
T 1wao_1 213 EKITVCGDTHGQ--------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFG-FK-LLYPDHFH 276 (477)
T ss_dssp CEEEEECBCTTC--------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHH-HH-HHSTTTEE
T ss_pred cceEEEeCCCCC--------------HHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHHHHHHHHH-HH-hhCCCceE
Confidence 789999999942 344556666654333 3569999999965432222 222211 11 12245789
Q ss_pred EecCCCcc
Q 046241 407 TAIGNHER 414 (638)
Q Consensus 407 ~v~GNHD~ 414 (638)
.+.||||.
T Consensus 277 ~lrGNHE~ 284 (477)
T 1wao_1 277 LLRGNHET 284 (477)
T ss_dssp EECCTTSS
T ss_pred eecCCccH
Confidence 99999995
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.40 E-value=0.067 Score=45.70 Aligned_cols=85 Identities=15% Similarity=0.187 Sum_probs=52.1
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+++.... .+++.|+|...... .-.|+|........ ... . ....
T Consensus 18 P~~P~~l~~~~~~--~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~--~~~-------------~---------~~~~ 71 (116)
T 1x5g_A 18 PGPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKE--QDV-------------D---------VSSH 71 (116)
T ss_dssp CCCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCC--CCE-------------E---------ECSS
T ss_pred CcCCCccEEEecC--CCEEEEEEeCCCCCCCcccEEEEEEEECCCCcc--EEE-------------e---------cCCc
Confidence 4567767766543 57899999865321 23566654221100 000 0 0113
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
...|+||+|+|.|.+||..-+ ..+|+...|+|.+..
T Consensus 72 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 72 SYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence 578999999999999997532 247888889997643
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.09 Score=45.99 Aligned_cols=36 Identities=17% Similarity=0.394 Sum_probs=26.7
Q ss_pred EEEEcCCCCCcEEEEEEeeC-CCCcce--eeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSD-LVGWSD--KIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~p~~ 323 (638)
.++|.||+|++.|.+||..- ..|.|+ ...|+|.+.+
T Consensus 65 ~~~l~~L~p~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 65 HIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp CEEECCCCTTCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 46899999999999999863 334443 4578887654
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.35 E-value=0.19 Score=42.81 Aligned_cols=88 Identities=11% Similarity=0.066 Sum_probs=53.2
Q ss_pred cCCCCCCceEEEeecCCCCCceEEEEEeCCC--------CCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCcc
Q 046241 210 FANPKSPLYGHLSSSDSTATSMRVTWVSGDK--------EPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWH 281 (638)
Q Consensus 210 f~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~--------~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~ 281 (638)
..-|..|..+++.......+++.|+|..... ..-.|+|.......-... . +.
T Consensus 5 ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~--~------------~~------ 64 (109)
T 1uc6_A 5 SVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHV--E------------LS------ 64 (109)
T ss_dssp SCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCE--E------------ES------
T ss_pred EEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEE--e------------cc------
Confidence 3457788888877654346899999997642 134677765322100000 0 00
Q ss_pred CCceEEEEEEcCCCCCcEEEEEEeeCC---C---CcceeeEEECC
Q 046241 282 DPGYIHTAVMTGLRPSATFSYRYGSDL---V---GWSDKIQFKTP 320 (638)
Q Consensus 282 ~~g~~h~a~l~gL~P~T~Y~Yrvg~~~---~---~~S~~~sF~T~ 320 (638)
-...+.|.+|+|||.|..||.... + .||+...++|.
T Consensus 65 ---~~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~~ 106 (109)
T 1uc6_A 65 ---NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATPW 106 (109)
T ss_dssp ---SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECCC
T ss_pred ---cCCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeeec
Confidence 012568899999999999998642 1 35555555543
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.35 E-value=1.1 Score=44.30 Aligned_cols=98 Identities=18% Similarity=0.224 Sum_probs=55.3
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
+..|..+.+.... .++++|+|...... .-.|+|............. + +......
T Consensus 113 ~~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~-------------~---------~~~~~~~ 168 (290)
T 3r8q_A 113 VSPPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPIQRTI-------------K---------PDVRSYT 168 (290)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCCCEEEEEEEESSSCCCEEEEE-------------C---------TTCSEEE
T ss_pred CCCCceeEEEEcC--CCeEEEEEeCCCCcccEEEEEEEECCCCcceEEec-------------C---------CCccEEE
Confidence 4567777666443 57999999976431 2356775432211100000 0 1112468
Q ss_pred EcCCCCCcEEEEEEeeC-CCCcce--eeEEECCCCCCCCccEEEEEEec
Q 046241 291 MTGLRPSATFSYRYGSD-LVGWSD--KIQFKTPPAGGSSEVLRFLTYGD 336 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~p~~~~~~~~rf~v~GD 336 (638)
|+||+|++.|.++|..- ..+.|. ...+.|.|.+. ..+++...++
T Consensus 169 i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P--~~l~~~~~~~ 215 (290)
T 3r8q_A 169 ITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAP--SNLRFLATTP 215 (290)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCC--EEEEEEEEET
T ss_pred ECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCC--CccEEEeeCC
Confidence 99999999999999753 223343 34466665432 2366655544
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=95.32 E-value=0.15 Score=43.13 Aligned_cols=88 Identities=19% Similarity=0.170 Sum_probs=49.4
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
|.+|..+++.-. +.+++.|+|...... .-.|+|........ ...... + +-...+.
T Consensus 3 p~~P~~l~v~~~--t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~-~~~~~v-----------~---------~~~~~~~ 59 (104)
T 2rb8_A 3 LDAPSQIEVKDV--TDTTALITWMPPSQPVDGFELTYGIKDVPGD-RTTIDL-----------T---------EDENQYS 59 (104)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEETTCTTC-CEEEEE-----------E---------TTCCEEE
T ss_pred CCCCCccEEEEe--cCCeEEEEEcCCCCccceEEEEEEECcCCCc-eEEEEc-----------C---------CCcCEEE
Confidence 456776666553 468999999865422 23577753221100 000000 1 1113578
Q ss_pred EcCCCCCcEEEEEEeeCC-CCcc--eeeEEECCCCC
Q 046241 291 MTGLRPSATFSYRYGSDL-VGWS--DKIQFKTPPAG 323 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~~-~~~S--~~~sF~T~p~~ 323 (638)
|+||+|||+|.++|..-. .+.| ....|+|.+..
T Consensus 60 l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 60 IGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC--
T ss_pred eCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCc
Confidence 999999999999997532 2222 34568887653
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.11 Score=45.68 Aligned_cols=95 Identities=17% Similarity=0.255 Sum_probs=52.0
Q ss_pred CCCCCc-eEEEeecCCCCCceEEEEEeCCCC--Cc-EEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCC--ce
Q 046241 212 NPKSPL-YGHLSSSDSTATSMRVTWVSGDKE--PQ-QVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDP--GY 285 (638)
Q Consensus 212 ~~~~P~-~~~ls~~~~~~~sm~V~W~t~~~~--~~-~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~--g~ 285 (638)
.|.+|. .+++... +.++++|+|...... .. .|+|.......... .++. ....|..- .-
T Consensus 15 ~P~~P~~~~~~~~~--~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~------~~~~--------~~~~w~~~~~~~ 78 (127)
T 2dmk_A 15 APNPPSIREELCTA--SHDTITVHWISDDEFSISSYELQYTIFTGQANFI------SLYN--------SVDSWMIVPNIK 78 (127)
T ss_dssp SCCCCEEEEEEEEE--ETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHH------HHHH--------TGGGSEEEEEEC
T ss_pred CCcCCCCCCEEEee--eCCEEEEEECCCCCCCccceEEEEEEeccccccc------cccc--------CCCCcEEeeccc
Confidence 467787 6665554 357999999976542 22 56675310000000 0000 00011100 00
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCC---CCcceeeEEECCCC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDL---VGWSDKIQFKTPPA 322 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~---~~~S~~~sF~T~p~ 322 (638)
-...+++||+|+|+|.|||..-+ ..+|....++|++.
T Consensus 79 ~~~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 79 QNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp SSEEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred CCeEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 12457899999999999997532 14567788888764
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.17 E-value=0.073 Score=46.55 Aligned_cols=88 Identities=16% Similarity=0.221 Sum_probs=52.4
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+++.... .+++.|+|....... -.|+|......... +... . ..+-..
T Consensus 28 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~---~~~~------~-----------~~~~~~ 85 (130)
T 1wfo_A 28 PGPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANT---ATVE------V-----------LAPSAR 85 (130)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSC---CCEE------E-----------ECTTCC
T ss_pred CCCCCceEEEecC--CCEEEEEEcCCCCCCCceEEEEEEEEECCCCCce---EEEE------E-----------eCCCce
Confidence 5567667766653 579999998654321 25666532211000 0000 0 011224
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~ 322 (638)
...|++|+|+|.|.+||..-+ . .+|....|+|.+.
T Consensus 86 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 86 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 678999999999999997632 2 3667778998754
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.13 Score=44.21 Aligned_cols=87 Identities=16% Similarity=0.135 Sum_probs=51.3
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCC--C-CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDK--E-PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~--~-~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
.|..+++.... .++++|+|..... . .-.|+|.............. . .+-...+.|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~---------~~~~~~~~i 78 (119)
T 2ee2_A 21 APTEVGVKVLS--SSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQ-----------V---------TSQEYSARL 78 (119)
T ss_dssp CCCSCEEEEEE--TTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCEEEE-----------E---------ETTCSEEEE
T ss_pred CCCcEEEEEcc--CCEEEEEecCCCCCccceEEEEEEECCCcccCcEEEE-----------c---------CCCEeEEEE
Confidence 45556655443 5799999987643 1 23566643221111000000 0 011136789
Q ss_pred cCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 292 TGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
+||+|+|.|.+||..-+ ..+|+...|+|.+.+
T Consensus 79 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 79 ENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAS 114 (119)
T ss_dssp CSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCC
T ss_pred CCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCC
Confidence 99999999999997632 247888889997654
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.12 E-value=0.13 Score=44.05 Aligned_cols=87 Identities=20% Similarity=0.439 Sum_probs=50.8
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-Cc----EEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-PQ----QVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-~~----~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+.+.... .+++.|+|...... .. .|+|...... . .|.. +. .+...
T Consensus 18 P~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~---~~~~---~~---------------~~~~~ 73 (118)
T 1x3d_A 18 PDIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN-G---EFCQ---CY---------------MGSQK 73 (118)
T ss_dssp CCCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSS-S---CCEE---EE---------------EESCS
T ss_pred CcCCCCcEEeccC--CCEEEEEECCCCCCCCcceEEEEEEecCCCC-C---CeEE---ee---------------ccCCc
Confidence 5566666665543 57999999876432 22 4555432211 0 0100 00 00012
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
...+++|+|+|.|.|||..-+ ..+|+.-.|+|.+..
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 468899999999999997522 246778888887643
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.03 E-value=0.037 Score=60.74 Aligned_cols=71 Identities=15% Similarity=0.162 Sum_probs=43.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
.+++++||+|.. ...+.++.+.......|-++++||+++.+....+-=.++..++. ...-.++.+
T Consensus 83 ~pI~VIGDIHGq--------------~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~-~~P~~v~lL 147 (521)
T 1aui_A 83 APVTVCGDIHGQ--------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKI-LYPKTLFLL 147 (521)
T ss_dssp SSEEEECCCTTC--------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHH-HSTTTEEEC
T ss_pred cceeeccCCCCC--------------HHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhh-hCCCeEEEe
Confidence 468999999942 44455666544344568899999999654332221111111211 112348899
Q ss_pred cCCCcc
Q 046241 409 IGNHER 414 (638)
Q Consensus 409 ~GNHD~ 414 (638)
.||||.
T Consensus 148 RGNHE~ 153 (521)
T 1aui_A 148 RGNHEC 153 (521)
T ss_dssp CCTTSS
T ss_pred cCCccH
Confidence 999996
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.14 Score=43.46 Aligned_cols=36 Identities=25% Similarity=0.452 Sum_probs=28.2
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
..++++|+|+++|.+||..-+ ..||+...++|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 567899999999999997632 247788889887643
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.99 E-value=1.1 Score=42.02 Aligned_cols=69 Identities=23% Similarity=0.318 Sum_probs=41.7
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
.|..+.+.... .+++.|+|...... .-.|+|........ ...... + +-...+.|
T Consensus 116 ~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~-~~~~~~-----------~---------~~~~~~~i 172 (203)
T 2gee_A 116 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEED-VAELSI-----------S---------PSDNAVVL 172 (203)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCCSEEEEEEEETTCGGG-CEEEEE-----------C---------TTCCEEEE
T ss_pred CCCceEEEEcC--CCEEEEEEcCCCCCCccEEEEEEEECCCCCc-cEEEEc-----------C---------CCcCEEEE
Confidence 67766665443 58999999976432 23577764222110 000000 0 11235789
Q ss_pred cCCCCCcEEEEEEee
Q 046241 292 TGLRPSATFSYRYGS 306 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~ 306 (638)
+||+|+|.|.++|..
T Consensus 173 ~~L~p~t~Y~~~V~A 187 (203)
T 2gee_A 173 TNLLPGTEYVVSVSS 187 (203)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEE
Confidence 999999999999975
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.19 Score=41.60 Aligned_cols=85 Identities=16% Similarity=0.194 Sum_probs=49.9
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCc-cceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSE-TSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~-~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
..|..+.+.... .++++|+|...... .-.|+|...... ....... + +-...+.
T Consensus 3 ~~P~~l~v~~~~--~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~~~-------------~---------~~~~~~~ 58 (98)
T 3teu_A 3 DAPTDLQVTNVT--DTSITVSWTPPSATITGYRITYTPSNGPGEPKELTV-------------P---------PSSTSVT 58 (98)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEEEE-------------C---------TTCSEEE
T ss_pred CCCCceEEEEec--CCEEEEEEeCCCCcccEEEEEEEECCCCCceEEEEc-------------C---------CCcCEEE
Confidence 357667665443 47899999976432 236777632211 1000100 1 1113578
Q ss_pred EcCCCCCcEEEEEEeeC-CCCcceeeEEECCCC
Q 046241 291 MTGLRPSATFSYRYGSD-LVGWSDKIQFKTPPA 322 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~-~~~~S~~~sF~T~p~ 322 (638)
|+||+|+|.|.++|..- ..+.|+..++...+.
T Consensus 59 i~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 59 ITGLTPGVEYVVSVYALKDNQESPPLVGTQTTG 91 (98)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCCEEEEEECS
T ss_pred ecCCCCCCEEEEEEEEEeCCCCCCCeEEEeccC
Confidence 99999999999999763 335666666555443
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.86 E-value=0.16 Score=43.46 Aligned_cols=84 Identities=21% Similarity=0.251 Sum_probs=49.2
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
.|..|..++..-. +.+++.|+|....... -.|+|..... . ... +. -.
T Consensus 7 ~Ps~v~~l~v~~~--t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~----~--~~~-----------~~---------~~ 58 (104)
T 2dle_A 7 GAIQVFDVTAVNI--SATSLTLIWKVSDNESSSNYTYKIHVAGETD----S--SNL-----------NV---------SE 58 (104)
T ss_dssp SCCBEEEEEEEEE--CSSCEEEEEEESCSTTCCSCEEEEEEECSSC----E--EEE-----------EE---------SS
T ss_pred CCCCCceEEEEEe--ecCEEEEEEcCCCCCCCceEEEEEEEECCCC----e--EEE-----------cC---------CC
Confidence 3455555555443 4689999998654321 3566653211 0 000 00 01
Q ss_pred EEEEEcCCCCCcEEEEEEeeCCC---CcceeeEEECCCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDLV---GWSDKIQFKTPPAG 323 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~~---~~S~~~sF~T~p~~ 323 (638)
..+.|+||+|||.|.++|..... +-+....++|.|.+
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCS
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCC
Confidence 26899999999999999986322 22345667887654
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=94.80 E-value=0.69 Score=45.76 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=27.5
Q ss_pred EEEEcCCCCCcEEEEEEeeCC---CCcceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL---VGWSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~---~~~S~~~sF~T~p 321 (638)
..+|+||+|+|.|.++|..-+ ..+|+...|+|+|
T Consensus 254 ~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 254 EYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 568999999999999996521 2478889999975
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=94.77 E-value=0.28 Score=46.38 Aligned_cols=85 Identities=16% Similarity=0.232 Sum_probs=50.5
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCC------CC---CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCc
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGD------KE---PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPG 284 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~------~~---~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g 284 (638)
..|..+.+.... .++++|+|.... .. .-.|+|............. .+
T Consensus 6 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------------------~~ 61 (211)
T 3p4l_A 6 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA----------------------NA 61 (211)
T ss_dssp CCCEEEEEEECS--SSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE----------------------EE
T ss_pred CCCCCEEEEecC--CCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe----------------------CC
Confidence 467667665543 579999999632 11 2357775432211100000 01
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
-.....|+||+|+|.|.++|..-+ ..||....|+|.+.
T Consensus 62 ~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 62 TTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 123678999999999999997522 24677888998653
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.063 Score=44.71 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=26.3
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p 321 (638)
...|+||+|+|.|.+||..-+ ..||+...|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 357899999999999997532 2467777788865
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.65 E-value=0.33 Score=40.56 Aligned_cols=83 Identities=18% Similarity=0.316 Sum_probs=46.8
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|. +.+... ..+++.|+|...... .-.|+|............. + +-..
T Consensus 8 P~~p~-~~v~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-------------~---------~~~~ 62 (107)
T 2dn7_A 8 PGRPT-MMISTT--AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDF-------------G---------KDDQ 62 (107)
T ss_dssp CCCCE-EEEEEC--STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEE-------------E---------TTCC
T ss_pred CCCCc-EeEEec--CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEEe-------------C---------CCcc
Confidence 44555 455544 468999999975422 1256675432111000000 0 1113
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-CC---cceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-VG---WSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~~sF~T~p 321 (638)
...|++|+|+|.|.+||..-+ .+ +|. ..|+|..
T Consensus 63 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 63 HFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 568999999999999997532 23 344 4577754
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.63 E-value=0.35 Score=41.56 Aligned_cols=85 Identities=24% Similarity=0.255 Sum_probs=49.7
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
..|..+++.-. +.++++|+|...... .-.|+|............ .+ +-...+.|
T Consensus 9 ~pP~~l~~~~v--t~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~-------------v~---------~~~t~~~l 64 (108)
T 2ee3_A 9 APPRHLGFSDV--SHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTE-------------AP---------GNATSAML 64 (108)
T ss_dssp CCSSCEEEESC--CSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEE-------------EE---------TTCCEEEE
T ss_pred CCCceEEEEEc--cCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEE-------------cC---------CCcCEEEc
Confidence 46766666544 468999999865432 236777643211100000 01 11236789
Q ss_pred cCCCCCcEEEEEEeeC-CCCcce--eeEEECCCC
Q 046241 292 TGLRPSATFSYRYGSD-LVGWSD--KIQFKTPPA 322 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~p~ 322 (638)
+||+|+|.|..+|..- +.+-|+ ...|+|.+.
T Consensus 65 ~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~v 98 (108)
T 2ee3_A 65 GPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKA 98 (108)
T ss_dssp CSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCC
T ss_pred CCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCC
Confidence 9999999999999753 223333 346899743
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.61 E-value=0.28 Score=42.12 Aligned_cols=86 Identities=13% Similarity=0.088 Sum_probs=49.4
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
.|.+|..+++.. ...+++.|+|...... .-.|+|....... ..... + +-...+
T Consensus 7 ~p~~P~~l~~~~--~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~---~~~~v-----------~---------~~~t~~ 61 (115)
T 2cuh_A 7 GPDGPTQLRALN--LTEGFAVLHWKPPQNPVDTYDIQVTAPGAPP---LQAET-----------P---------GSAVDY 61 (115)
T ss_dssp CCSSCEEEECCC--CSSSCEEEEEECCSSCCSEEEEEEECSSSCC---EEEEE-----------E---------TTCSEE
T ss_pred CCCCCcceEEEe--ccCCeEEEEEECCCCCccEEEEEEEcCCCCc---EEEEE-----------C---------CCccEE
Confidence 355676555543 3468999999864332 2357775422111 00000 1 111357
Q ss_pred EEcCCCCCcEEEEEEeeCC-CC--cceeeEEECCCC
Q 046241 290 VMTGLRPSATFSYRYGSDL-VG--WSDKIQFKTPPA 322 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~~-~~--~S~~~sF~T~p~ 322 (638)
.|+||+|+|+|.++|..-. .+ ......|+|.+.
T Consensus 62 ~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 62 PLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCC
T ss_pred EEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCC
Confidence 8999999999999997632 12 123556888754
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.55 E-value=0.35 Score=42.10 Aligned_cols=36 Identities=11% Similarity=0.028 Sum_probs=28.1
Q ss_pred EEEEEcCCCCCcEEEEEEeeC----CCCcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD----LVGWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~----~~~~S~~~sF~T~p~ 322 (638)
..+.|+||+|+|.|.+||..- ...||....|+|.+.
T Consensus 79 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 79 SSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 467899999999999999752 124777888998754
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.50 E-value=0.23 Score=40.33 Aligned_cols=67 Identities=16% Similarity=0.363 Sum_probs=39.5
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
|..|..+++.... .+++.|+|...........|..-... .... . .. + -...++
T Consensus 4 P~~P~~l~~~~~~--~~sv~L~W~~~~~~~~i~~Y~v~~~~-~~~~--------~-----~~---------~--~~~~~~ 56 (88)
T 1k85_A 4 PTAPTNLASTAQT--TSSITLSWTASTDNVGVTGYDVYNGT-ALAT--------T-----VT---------G--TTATIS 56 (88)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCSSEEEEEEEESS-SEEE--------E-----ES---------S--SEEEEC
T ss_pred cCCCCccEEEecc--CCEEEEEECCCCCCCCccEEEEEECC-EEEe--------e-----cC---------C--CEEEeC
Confidence 5677666665543 57899999876533334444321100 0000 0 00 1 135689
Q ss_pred CCCCCcEEEEEEee
Q 046241 293 GLRPSATFSYRYGS 306 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~ 306 (638)
+|+|+++|+|+|..
T Consensus 57 ~L~~~t~Y~~~V~A 70 (88)
T 1k85_A 57 GLAADTSYTFTVKA 70 (88)
T ss_dssp CCCSSCEEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999976
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.48 E-value=0.18 Score=43.25 Aligned_cols=89 Identities=17% Similarity=0.190 Sum_probs=53.2
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCC--C-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDK--E-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~--~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
.|..+++.... .+++.|+|..... . .-.|+|......... .+. . .....++-..
T Consensus 18 ~P~~~~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~--------~~~--~-------~~~~~~~~~~ 78 (122)
T 1va9_A 18 PPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNG--------QYS--I-------VEMKATGDSE 78 (122)
T ss_dssp CCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCC--------SCB--C-------CBCCCCSSEE
T ss_pred CCcceEEEecc--CCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCc--------ceE--E-------EEEecCCcee
Confidence 57667665543 5899999997643 1 125666543211000 000 0 0001123456
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
.+.|+||+|+|.|.+||..-+ ..+|....|+|...
T Consensus 79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 79 VYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 789999999999999997531 24778888988754
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.44 E-value=0.17 Score=43.23 Aligned_cols=36 Identities=22% Similarity=0.151 Sum_probs=28.4
Q ss_pred EEEEEcCCCCCcEEEEEEeeC----CCCcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD----LVGWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~----~~~~S~~~sF~T~p~ 322 (638)
..+.|++|+|+|.|.+||..- ...+|+...|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 357899999999999999752 124788889999754
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=94.43 E-value=0.64 Score=43.93 Aligned_cols=87 Identities=13% Similarity=0.257 Sum_probs=53.8
Q ss_pred CCCCCceEEEeecC--CCCCceEEEEEeCCCC---------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCc
Q 046241 212 NPKSPLYGHLSSSD--STATSMRVTWVSGDKE---------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGW 280 (638)
Q Consensus 212 ~~~~P~~~~ls~~~--~~~~sm~V~W~t~~~~---------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~ 280 (638)
.|..|..+.+.... ...+++.|+|...... .-.|+|....... +... . +
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~-----~~~~-~--------~------ 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAE-----WEIH-F--------A------ 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSS-----CEEE-E--------E------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCC-----CEEE-e--------c------
Confidence 46688777777643 2357999999875432 1246665432110 1000 0 0
Q ss_pred cCCceEEEEEEcCCCCCcEEEEEEeeC--C---CCcceeeEEECCC
Q 046241 281 HDPGYIHTAVMTGLRPSATFSYRYGSD--L---VGWSDKIQFKTPP 321 (638)
Q Consensus 281 ~~~g~~h~a~l~gL~P~T~Y~Yrvg~~--~---~~~S~~~sF~T~p 321 (638)
+-.....|.+|+|+|.|..||... . ..||+...|+|+.
T Consensus 162 ---~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 ---GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp ---ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred ---cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 011256899999999999999752 1 2578889999963
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.28 Score=41.09 Aligned_cols=78 Identities=22% Similarity=0.270 Sum_probs=45.7
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
|..|..+.+... ..+++.|+|...... .-.|+|......... .... .++-...++
T Consensus 2 p~~P~~l~~~~~--~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~-~~~~--------------------~~~~~t~~~ 58 (100)
T 3b83_A 2 LQPPFNIKVTNI--TLTTAVVTWQPPILPIEGILVTFGRKNDPSDE-TTVD--------------------LTSSITSLT 58 (100)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEESSCTTTC-EEEE--------------------ECTTEEEEE
T ss_pred CccCCccEEEEe--cCCEEEEEEcCCcccCCEEEEEEEECCCCCCc-eEEE--------------------ECCcceEEE
Confidence 456766666553 368999999865432 235777532211000 0000 012234678
Q ss_pred EcCCCCCcEEEEEEeeC-CCCcce
Q 046241 291 MTGLRPSATFSYRYGSD-LVGWSD 313 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~-~~~~S~ 313 (638)
|+||+|+|+|.+||... ..++|+
T Consensus 59 i~~L~p~t~Y~~~V~A~n~~g~s~ 82 (100)
T 3b83_A 59 LTNLEPNTTYEIRIVARNGQQYSP 82 (100)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC
T ss_pred ECCCCCCCEEEEEEEEEeCCCCCC
Confidence 99999999999999763 234554
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.39 E-value=0.55 Score=44.20 Aligned_cols=71 Identities=17% Similarity=0.194 Sum_probs=41.3
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
.|..|..+.... ...+++.|+|...... .-.|+|............. + +-.
T Consensus 109 ~P~~P~~~~~~~--~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~---------~~~ 164 (209)
T 2vkw_A 109 EPSAPKLEGQMG--EDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRL-------------P---------SGS 164 (209)
T ss_dssp SCCCCEEEEEEC--TTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEEE-------------C---------TTC
T ss_pred CCCCCccccccc--ccCCeEEEEEECcccCCCCCceEEEEEECCCCCCceeeec-------------C---------CCc
Confidence 356676654433 3468999999975321 1356776421111110000 1 112
Q ss_pred EEEEEcCCCCCcEEEEEEee
Q 046241 287 HTAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~ 306 (638)
....|+||+|+|.|.+||..
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A 184 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVA 184 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEE
Confidence 35689999999999999976
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.32 E-value=0.14 Score=44.00 Aligned_cols=35 Identities=23% Similarity=0.521 Sum_probs=24.7
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-CC---cceee-EEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-VG---WSDKI-QFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~~-sF~T~p~ 322 (638)
...++||+|+++|.|||..-+ .+ +|..- .++|++.
T Consensus 77 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 77 SVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 578999999999999997632 23 34443 4677654
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.08 Score=45.36 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=28.3
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
..+|+||+|+|.|.|||..-+ ..||+...|+|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 105 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGS 105 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCC
Confidence 357899999999999997532 247788889998754
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=94.25 E-value=0.23 Score=48.20 Aligned_cols=89 Identities=12% Similarity=0.218 Sum_probs=54.9
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
+..|.-+++...+ .+++.|+|...... .-.|+|...+.......... ....
T Consensus 106 ~~pP~~l~~~~~~--~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~w~~~~~~~--------------------~~~~ 163 (214)
T 2b5i_B 106 LMAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLT--------------------LKQK 163 (214)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEE--------------------ECSC
T ss_pred CCCCceEEEEEec--CCeEEEEECCCCccccCCCceEEEEEEecCCCChheeeeee--------------------eccc
Confidence 4678778877654 36899999876532 23566754322111100000 0011
Q ss_pred EEEEEEcCCCCCcEEEEEEeeC---C-----CCcceeeEEECCCCC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSD---L-----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~---~-----~~~S~~~sF~T~p~~ 323 (638)
.+.+.|.+|+|||+|..||... + ..||+...|+|.|..
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 2467889999999999999853 1 257888999998754
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=94.23 E-value=0.85 Score=42.87 Aligned_cols=127 Identities=13% Similarity=0.115 Sum_probs=66.2
Q ss_pred ceEEEEEEeeeccc--eEEEEEec---CCCcc---ee-eccccccccCCCCCCceEEEeecCCCCCceEEEEEeCC--CC
Q 046241 173 SGSIKFHVINIRTD--IEFVFFAG---GFDTP---CI-LNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGD--KE 241 (638)
Q Consensus 173 ~g~~~~~l~n~r~~--~~f~~f~~---~~~~~---~~-~~~s~~~~f~~~~~P~~~~ls~~~~~~~sm~V~W~t~~--~~ 241 (638)
.....+.+-+++.. |.|++... |...+ .. +.......-..+..|..+... ....+++.|+|.... ..
T Consensus 67 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~--~~~~~sv~l~W~~p~~~~~ 144 (214)
T 2ibg_A 67 GKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIE--EYSETAVVLHWSLASDADE 144 (214)
T ss_dssp EEEEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCB--CCSSSCEEEEEECCTTCCG
T ss_pred CcceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEE--EccCCeEEEEEeCCCccCC
Confidence 34566777777765 77777653 22111 11 111111111123345544433 334679999999763 11
Q ss_pred ----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEEeeCC----CCcce
Q 046241 242 ----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDL----VGWSD 313 (638)
Q Consensus 242 ----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~ 313 (638)
.-.|+|...... ........ .+ .-.....|+||+|+|.|.|||..-+ ..+|+
T Consensus 145 ~~i~~Y~v~~~~~~~~-~~~~~~~~----------~~---------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 204 (214)
T 2ibg_A 145 HLITGYYAYYRPSSSA-GEYFKATI----------EG---------AHARSFKIAPLETATMYEFKLQSFSAASASEFSA 204 (214)
T ss_dssp GGCCEEEEEEEETTCC-SCCEEEEE----------EC---------TTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCC
T ss_pred CCcceEEEEEEECCCC-cceEEeec----------cC---------CcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcc
Confidence 235777543221 00000000 00 0112467899999999999997532 24678
Q ss_pred eeEEECCC
Q 046241 314 KIQFKTPP 321 (638)
Q Consensus 314 ~~sF~T~p 321 (638)
...++|..
T Consensus 205 ~~~~~T~~ 212 (214)
T 2ibg_A 205 LKQGRTQR 212 (214)
T ss_dssp CEEEECCC
T ss_pred eEeeEecC
Confidence 88888863
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.19 E-value=0.11 Score=47.05 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=28.9
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
..++|+||+|+|.|..||..-. +.+|+...|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 3678999999999999997531 24688889999864
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.11 E-value=0.53 Score=39.75 Aligned_cols=85 Identities=16% Similarity=0.182 Sum_probs=49.8
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
.|..|..+++... ..+++.|+|.-.... .-.|+|...... ...... + +-...+
T Consensus 7 ~p~~P~~l~v~~~--~~~sv~lsW~~p~~~i~~Y~i~y~~~~~~---~~~~~~-----------~---------~~~ts~ 61 (105)
T 2cum_A 7 GLEAPRDLEAKEV--TPRTALLTWTEPPVRPAGYLLSFHTPGGQ---TQEILL-----------P---------GGITSH 61 (105)
T ss_dssp TCCCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEECTTSC---EEEEEE-----------C---------SSCSEE
T ss_pred CCCCCCceEEEec--cCCEEEEEEcCCCCccceEEEEEEeCCCc---eEEEEE-----------C---------CCccEE
Confidence 3556766665543 468999999865432 235777542211 111000 1 111367
Q ss_pred EEcCCCCCcEEEEEEeeC-CCCcc--eeeEEECCC
Q 046241 290 VMTGLRPSATFSYRYGSD-LVGWS--DKIQFKTPP 321 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~-~~~~S--~~~sF~T~p 321 (638)
.|+||+|+|.|.++|..- +.+.| ....|+|..
T Consensus 62 ~l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 62 QLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp EECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred EECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCC
Confidence 899999999999999763 22223 356688864
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.06 E-value=3 Score=40.86 Aligned_cols=102 Identities=18% Similarity=0.187 Sum_probs=57.1
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
.|..|..+++.... .++++|+|...... .-.|+|............. +.. .+-....
T Consensus 104 ~p~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~------~~~~~~~ 162 (283)
T 1tdq_A 104 EIDAPKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLV-------------PKG------IGPTTKT 162 (283)
T ss_dssp CCCCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEE-------------ECC------SSSEEEE
T ss_pred CCCCCCceEEEecC--CCeEEEEecCCCCCccEEEEEEEeCCCCcceEEEC-------------CCC------CcccceE
Confidence 35677777665543 57999999976432 2367775432211100100 000 0114577
Q ss_pred EEcCCCCCcEEEEEEeeC-CCCccee--eEEECCCCCCCCccEEEEEEec
Q 046241 290 VMTGLRPSATFSYRYGSD-LVGWSDK--IQFKTPPAGGSSEVLRFLTYGD 336 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~-~~~~S~~--~sF~T~p~~~~~~~~rf~v~GD 336 (638)
.++||+|++.|.++|..- +.+.|+. ..+.|.|.+ . ..+++...++
T Consensus 163 ~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~-P-~~l~~~~~~~ 210 (283)
T 1tdq_A 163 TLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDS-P-RDLMVTASSE 210 (283)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC-C-EEEEEEEECS
T ss_pred EEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCC-C-CccEEeEecC
Confidence 899999999999999763 2244443 445565542 2 2366655554
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.03 E-value=0.16 Score=43.51 Aligned_cols=73 Identities=21% Similarity=0.305 Sum_probs=41.9
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCCCc----EEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQ----QVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~~----~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
-|..|..+++... ..+++.|+|........ .|+|....... ...... .+ +-..
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~--~~~~~~----------~~---------~~~~ 73 (118)
T 2yrz_A 17 VPDTPTRLVFSAL--GPTSLRVSWQEPRCERPLQGYSVEYQLLNGGE--LHRLNI----------PN---------PAQT 73 (118)
T ss_dssp CCCCCCCCEECCC--BTTEEEEECCCCCCSSCEEEEEEEEEBSSSCC--EEEEEE----------SC---------TTCC
T ss_pred CCCCCCceEEEeC--CCCEEEEEeCCCCCCCCccEEEEEEEECCCCc--eEEEEc----------CC---------CCcC
Confidence 3556766665543 35799999986544322 45554322110 000000 00 1123
Q ss_pred EEEEcCCCCCcEEEEEEeeC
Q 046241 288 TAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
.+.|+||+|+|.|.+||..-
T Consensus 74 ~~~i~~L~p~t~Y~~~V~A~ 93 (118)
T 2yrz_A 74 SVVVEDLLPNHSYVFRVRAQ 93 (118)
T ss_dssp EEEEESCCTTCEEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEE
Confidence 57889999999999999763
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.91 E-value=0.24 Score=42.61 Aligned_cols=82 Identities=16% Similarity=0.216 Sum_probs=50.1
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCC--CC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDK--EP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~--~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
.|..+++.... .+++.|+|..... .. -.|+|........ .... + +-..
T Consensus 31 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~-~~~~-------------~---------~~~~ 85 (124)
T 2ed9_A 31 PPQNVSLEVVN--SRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGE-METL-------------E---------PNNL 85 (124)
T ss_dssp CCBSCCEEEEE--TTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCC-EEEE-------------C---------SSCS
T ss_pred CCeeeEEEEcC--CCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcc-eEEe-------------c---------CCcC
Confidence 46666665543 4789999987643 11 2566654322110 0000 0 1123
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p 321 (638)
...|+||+|+|.|.+||..-+ ..||+...|+|+.
T Consensus 86 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 86 WYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 568999999999999997532 2478888899864
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.90 E-value=0.11 Score=44.75 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=26.6
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
...+++|+|+|+|.|||..-+ ..||+...++|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 468899999999999997632 24677777888654
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=93.88 E-value=0.48 Score=39.54 Aligned_cols=70 Identities=23% Similarity=0.412 Sum_probs=40.7
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+.+. +-+.++++|+|...... .-.|+|...... ........ + +-.-.+.|+
T Consensus 4 ~P~~l~v~--~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~-~~~~~~~~-----------~---------~~~t~~~l~ 60 (98)
T 3tes_A 4 APKNLVVS--EVTEDSLRLSWTAPDAAFDSFMIQYQESEKV-GEAINLTV-----------P---------GSERSYDLT 60 (98)
T ss_dssp CCEEEEEE--SCCSSCEEEEEECCTTSCSEEEEEEEETTBC-SCCEEEEE-----------E---------TTCSEEEEC
T ss_pred CCCceEEE--ecCCCeEEEEecCCcCccceEEEEEEECCCC-CceEEEEc-----------C---------CCcCEEEEC
Confidence 35444444 34578999999976532 235777643211 00000000 1 111257899
Q ss_pred CCCCCcEEEEEEeeC
Q 046241 293 GLRPSATFSYRYGSD 307 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~ 307 (638)
||+|+|.|.++|..-
T Consensus 61 gL~P~t~Y~~~V~A~ 75 (98)
T 3tes_A 61 GLKPGTEYTVSIYGV 75 (98)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred CCCCCCEEEEEEEEE
Confidence 999999999999763
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=93.83 E-value=0.52 Score=39.65 Aligned_cols=81 Identities=14% Similarity=0.195 Sum_probs=47.5
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCC--C-----CcEEEEcCCCCcc-ce--eeEeecCCcccccccCCCCCCcCccCCc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDK--E-----PQQVQYGDGKSET-SK--VTTFTQDDMCNATALQSPAKDFGWHDPG 284 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~--~-----~~~V~yg~~~~~~-~~--~~t~~~~~~c~~~~~~~pa~~~g~~~~g 284 (638)
+|..+.+.... .+++.|+|..... . .-.|.|....... .. ..+.. +
T Consensus 7 ~P~~~~~~~~s--~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~----------------------~ 62 (102)
T 3n1f_C 7 GPHIAYTEAVS--DTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVE----------------------G 62 (102)
T ss_dssp CCEEEEEEECS--SSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEE----------------------T
T ss_pred CCceeEEEEcC--CCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEc----------------------C
Confidence 57666665543 5799999986542 1 1267776532210 00 01110 0
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEEC
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKT 319 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T 319 (638)
-...+.|.||+|+|.|..+|..-+ ...|+...++|
T Consensus 63 ~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 63 SKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred CceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 012468999999999999997521 23566777776
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.83 E-value=0.43 Score=41.40 Aligned_cols=36 Identities=19% Similarity=0.190 Sum_probs=29.0
Q ss_pred EEEEcCCCCCcEEEEEEeeC----CCCcceeeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSD----LVGWSDKIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~----~~~~S~~~sF~T~p~~ 323 (638)
.+.|+||+|+|.|.+||..- ...||+...|+|++..
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 46789999999999999752 1257889999998754
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.76 E-value=0.47 Score=41.18 Aligned_cols=93 Identities=19% Similarity=0.167 Sum_probs=50.7
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCC-ccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKS-ETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~-~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
-|..|..+.+... ..++++|.|.-.... .-.|+|..... ....-....... . .+.
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~--------~---------~~~ 77 (124)
T 1wis_A 17 LPGPPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS--------N---------EPD 77 (124)
T ss_dssp CCCCCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE--------S---------CTT
T ss_pred CCccCCCCEEEEe--cCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEc--------c---------CCC
Confidence 4567766666543 468999999654322 13677764210 000000000000 0 011
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCC-CC---ccee-eEEECCCCC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDL-VG---WSDK-IQFKTPPAG 323 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~-~sF~T~p~~ 323 (638)
...+.++||+|+|.|.+||..-+ .| +|.. ..++|.+..
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 23578899999999999997632 23 3443 458887543
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=93.73 E-value=0.17 Score=47.74 Aligned_cols=90 Identities=18% Similarity=0.268 Sum_probs=51.7
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCC--CC----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDK--EP----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~--~~----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
-|..|..+.+....+ +++|+|..... .. -.|+|.......-....+.... .+.
T Consensus 8 ~P~~P~~~~~~~~~~---s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~------------------~~~ 66 (209)
T 2vkw_A 8 TPSSPSIDQVEPYSS---TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE------------------ASM 66 (209)
T ss_dssp CCCCCEEEEEEECSS---CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHH------------------HHH
T ss_pred CCcCCcccEeeeccC---eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccC------------------CCc
Confidence 356787777765532 58999997632 11 2466654321110001010000 011
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
.....++||+|+|.|.|||..-+ ..+|....|+|.+.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp HSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred cceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 23578899999999999997521 24667778998764
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=93.72 E-value=0.79 Score=43.19 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=54.8
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCccc-eeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSETS-KVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~~-~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
.|..+.+... ..++++|+|...... .-.|+|........ ..... + +-.....
T Consensus 25 ~P~~l~~~~~--~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~---------~~~~~~~ 80 (203)
T 2gee_A 25 QPTDLSFVDI--TDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFV-------------D---------SSVGYYT 80 (203)
T ss_dssp CCEEEEEECC--TTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEEEE-------------E---------TTCCEEE
T ss_pred CCCccEEEec--CCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeEEc-------------C---------CCccEEE
Confidence 5655554443 468999999976532 23566754322110 00000 0 1112568
Q ss_pred EcCCCCCcEEEEEEeeC-CCCcceeeEEECCCCCCCCccEEEEEEec
Q 046241 291 MTGLRPSATFSYRYGSD-LVGWSDKIQFKTPPAGGSSEVLRFLTYGD 336 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~-~~~~S~~~sF~T~p~~~~~~~~rf~v~GD 336 (638)
++||+|+|.|.++|..- +.+.|....+.+.........+++...++
T Consensus 81 i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 81 VTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp ECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred eCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCCCceEEEEcCC
Confidence 89999999999999763 33556665666543322223366665555
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=93.61 E-value=0.51 Score=48.66 Aligned_cols=36 Identities=14% Similarity=0.264 Sum_probs=26.9
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC-CC---cceeeEEECCCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL-VG---WSDKIQFKTPPAG 323 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~~sF~T~p~~ 323 (638)
....|++|+|+|.|.+||..-+ .| +|. ..|+|++.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~-~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTV-YEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEE-EEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCcee-eEecCCCCC
Confidence 4568899999999999997632 23 443 479998765
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.56 E-value=0.19 Score=43.72 Aligned_cols=89 Identities=19% Similarity=0.310 Sum_probs=48.3
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-C----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-P----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-~----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
-|..|..+.+... ..++++|+|...... . -.|+|......... +.. +. . .+. -.
T Consensus 16 ~P~~P~~~~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~---w~~---~~--~--~~~---------~~ 74 (127)
T 1uey_A 16 VPNPPFDLELTDQ--LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGL---WHH---QT--E--VSG---------TQ 74 (127)
T ss_dssp SCCCCEEEEEECC--SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTC---EEE---EE--E--EES---------SC
T ss_pred CCcCCCCcEEEEc--cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCc---cEE---Ee--e--eCC---------Cc
Confidence 3567777766543 357999999965322 2 24556432211110 100 00 0 000 01
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC-C---Cccee-eEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL-V---GWSDK-IQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~-~sF~T~p~ 322 (638)
.. .+.+|+|+|.|.+||..-+ . .+|.. ..|+|.+.
T Consensus 75 ~~-~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 75 TT-AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CE-EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred eE-EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 12 4679999999999997632 2 35555 47888754
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=93.34 E-value=0.72 Score=44.43 Aligned_cols=100 Identities=12% Similarity=0.168 Sum_probs=57.4
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
+.+|..+.+.... .++++|+|...... .-.|+|.............. +......
T Consensus 6 ~~~P~~l~~~~~~--~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~~----------------------~~~~~~~ 61 (234)
T 3f7q_A 6 LGAPQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD----------------------SKVPSVE 61 (234)
T ss_dssp CCCCEEEEEEECS--SSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE----------------------ESSSEEE
T ss_pred CCCCcceEEEEcC--CCEEEEEEECCCCccceEEEEEEECCCCccceEEEc----------------------CCccEEE
Confidence 4567777776543 57999999976321 23577764322111111000 1113578
Q ss_pred EcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC-CCCccEEEEEEec
Q 046241 291 MTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG-GSSEVLRFLTYGD 336 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~-~~~~~~rf~v~GD 336 (638)
|+||+|+|.|.++|..-+ ..+|....|+|.... .....+++...++
T Consensus 62 i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 62 LTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred ECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 999999999999997521 236777889887432 1112255554444
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=93.32 E-value=0.42 Score=45.31 Aligned_cols=88 Identities=14% Similarity=0.254 Sum_probs=52.5
Q ss_pred CCCCCceEEEeecCC----CCCceEEEEEeCCCC-----CcEEEEc-CCCC-ccceeeEeecCCcccccccCCCCCCcCc
Q 046241 212 NPKSPLYGHLSSSDS----TATSMRVTWVSGDKE-----PQQVQYG-DGKS-ETSKVTTFTQDDMCNATALQSPAKDFGW 280 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~----~~~sm~V~W~t~~~~-----~~~V~yg-~~~~-~~~~~~t~~~~~~c~~~~~~~pa~~~g~ 280 (638)
.|..|..+.+....+ ..+++.|+|...... .-.|+|. .... ....+...
T Consensus 108 ~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~-------------------- 167 (215)
T 1cd9_B 108 KLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL-------------------- 167 (215)
T ss_dssp CCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE--------------------
T ss_pred EeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEecc--------------------
Confidence 467787666554311 367899999865421 2357776 3221 11110000
Q ss_pred cCCceEEEEEEcCCCCCcEEEEEEeeC----CC---CcceeeEEECCC
Q 046241 281 HDPGYIHTAVMTGLRPSATFSYRYGSD----LV---GWSDKIQFKTPP 321 (638)
Q Consensus 281 ~~~g~~h~a~l~gL~P~T~Y~Yrvg~~----~~---~~S~~~sF~T~p 321 (638)
.+......|.+|+|+|+|..||... .+ .||+...|+|+.
T Consensus 168 --~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 --PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp --ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred --cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 0123467899999999999999753 11 378888899864
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.30 E-value=0.39 Score=41.77 Aligned_cols=36 Identities=14% Similarity=0.190 Sum_probs=28.6
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
...+|+||+|+|.|.+||..-+ ..||....|+|.+.
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 77 LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 4678999999999999997632 24788889999764
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.30 E-value=0.44 Score=41.84 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=28.8
Q ss_pred EEEEEcCCCCCcEEEEEEeeC----CCCcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD----LVGWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~----~~~~S~~~sF~T~p~ 322 (638)
..++|+||+|+|.|..+|..- .+.+|+...|+|+..
T Consensus 75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 467999999999999999752 234788889999754
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.28 E-value=0.43 Score=40.17 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=49.0
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-cEEEEcCCCCc-cceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-QQVQYGDGKSE-TSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-~~V~yg~~~~~-~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
+..|..+++.... .+++.|+|....... -.|+|...... ....... ..++- .+.
T Consensus 9 ~~~P~~l~~~~~~--~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~~~--------------------~~~~~--~~~ 64 (104)
T 2dkm_A 9 LPPPRALTLAAVT--PRTVHLTWQPSAGATHYLVRCSPASPKGEEEEREV--------------------QVGRP--EVL 64 (104)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSSCSEEEEEEEESSSCCSSCCEEE--------------------EESSS--EEE
T ss_pred CCCCceeEEEecC--CCEEEEEEeCCCCCCeEEEEEEECCCCCCcceEEE--------------------ecCCC--EEE
Confidence 4467777766543 589999997543322 35666532110 0000000 00112 689
Q ss_pred EcCCCCCcEEEEEEeeC-CCCcce--eeEEECCCCC
Q 046241 291 MTGLRPSATFSYRYGSD-LVGWSD--KIQFKTPPAG 323 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~p~~ 323 (638)
|+||+|+|+|.++|..- +.+.|. ...++|.|.+
T Consensus 65 l~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 65 LDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSG 100 (104)
T ss_dssp EESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCS
T ss_pred ECCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCC
Confidence 99999999999999863 223343 3446676543
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.23 E-value=0.45 Score=40.94 Aligned_cols=89 Identities=20% Similarity=0.278 Sum_probs=49.4
Q ss_pred CCCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCC--CccceeeEeecCCcccccccCCCCCCcCccCC
Q 046241 211 ANPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGK--SETSKVTTFTQDDMCNATALQSPAKDFGWHDP 283 (638)
Q Consensus 211 ~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~--~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~ 283 (638)
.-|..|..+.+.... .++++|+|.-.... .-.|+|.... ..+...... + +
T Consensus 16 ~~P~~P~~~~~~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~-----~-------~--------- 72 (121)
T 1x4z_A 16 SPPEAPDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA-----I-------P--------- 72 (121)
T ss_dssp CCCCCCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE-----E-------C---------
T ss_pred CCCccCCCCEEEEcc--CCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc-----c-------C---------
Confidence 346677777666543 57999999853321 1256775432 111110000 0 0
Q ss_pred ceEEEEEEcCCCCCcEEEEEEeeCC-C---Ccceee-EEECCCC
Q 046241 284 GYIHTAVMTGLRPSATFSYRYGSDL-V---GWSDKI-QFKTPPA 322 (638)
Q Consensus 284 g~~h~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~-sF~T~p~ 322 (638)
+-...+.|+||+|+++|.|||..-+ . .+|..- .++|.+.
T Consensus 73 ~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~ 116 (121)
T 1x4z_A 73 PSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116 (121)
T ss_dssp TTCCEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSS
T ss_pred CCcCEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCC
Confidence 1123578899999999999997632 2 244433 3565543
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=93.20 E-value=0.56 Score=44.22 Aligned_cols=88 Identities=15% Similarity=0.246 Sum_probs=51.4
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
.|..+++...+...++++|+|...... .-.|+|......... .+.... .+ +-...+
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~~--------~~---------~~~~~~ 168 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIH--DWVIEP--------VV---------GNRLTH 168 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGG--GSEEEE--------EE---------SSCSEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCC--ceEEEE--------ec---------CCeeEE
Confidence 677777766542357999999965421 125666543221110 000000 00 112357
Q ss_pred EEcCCCCCcEEEEEEeeCC----CCcceeeEEECCC
Q 046241 290 VMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPP 321 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p 321 (638)
.|+||+|++.|.++|..-+ ..+|+...|+|..
T Consensus 169 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 169 QIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 8999999999999997532 2467788888764
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.19 E-value=0.61 Score=42.94 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=54.2
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
.|.+|..+++... ..++++|+|...... .-.|+|....... ..... +. -....
T Consensus 6 ~p~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~-~~~~~-------------~~---------~~~~~ 60 (186)
T 1qr4_A 6 DLDNPKDLEVSDP--TETTLSLRWRRPVAKFDRYRLTYVSPSGKK-NEMEI-------------PV---------DSTSF 60 (186)
T ss_dssp --CCCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECTTCCE-EEEEE-------------CT---------TCSEE
T ss_pred CCcCCCceEEEec--CCCEEEEEEeCCCCCccEEEEEEEeCCCCe-eEEEC-------------CC---------CCCEE
Confidence 3567877776654 357999999975432 2367776322110 00000 11 11246
Q ss_pred EEcCCCCCcEEEEEEeeCC-CCcce--eeEEECCCCCCCCccEEEEE
Q 046241 290 VMTGLRPSATFSYRYGSDL-VGWSD--KIQFKTPPAGGSSEVLRFLT 333 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~~-~~~S~--~~sF~T~p~~~~~~~~rf~v 333 (638)
.++||+|+|.|.++|.... .+.|. ...++|.|.+. ..+++..
T Consensus 61 ~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~P--~~l~~~~ 105 (186)
T 1qr4_A 61 ILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGSP--KGISFSD 105 (186)
T ss_dssp EEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCCC--SCEEEES
T ss_pred EECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCCC--CccEEEE
Confidence 8899999999999998632 33443 45677776542 2265543
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.01 E-value=0.64 Score=40.20 Aligned_cols=89 Identities=17% Similarity=0.156 Sum_probs=49.9
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCc-c------ceeeEeecCCcccccccCCCCCCcCccCC
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSE-T------SKVTTFTQDDMCNATALQSPAKDFGWHDP 283 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~-~------~~~~t~~~~~~c~~~~~~~pa~~~g~~~~ 283 (638)
|.+|..+++. +-+.++++|+|...... .-.|+|...... . ....... .|
T Consensus 9 pp~p~~L~v~--~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~-----------v~--------- 66 (112)
T 2cui_A 9 RPRLSQLSVT--DVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM-----------VP--------- 66 (112)
T ss_dssp CCCCCCCEEE--SCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE-----------EE---------
T ss_pred CCCCCceEEE--eecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEE-----------cC---------
Confidence 3345555544 44578999999865432 346888643211 0 0000000 01
Q ss_pred ceEEEEEEcCCCCCcEEEEEEeeCC-CCcc--eeeEEECCCCC
Q 046241 284 GYIHTAVMTGLRPSATFSYRYGSDL-VGWS--DKIQFKTPPAG 323 (638)
Q Consensus 284 g~~h~a~l~gL~P~T~Y~Yrvg~~~-~~~S--~~~sF~T~p~~ 323 (638)
+-...++|+||+|+|+|..+|.... .+-| -....+|.+.+
T Consensus 67 ~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 67 GTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp TTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred CCcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 1123689999999999999997532 2233 34557776644
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.85 E-value=0.28 Score=41.71 Aligned_cols=88 Identities=15% Similarity=0.220 Sum_probs=48.6
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
-|..|..+++... ..++++|+|...... .-.|+|...... ..+.. +. ... -.
T Consensus 15 ~P~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~----~~~~~---~~-----~~~---------~~ 71 (117)
T 1uem_A 15 LPGPPSKPQVTDV--TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVS----NSWQT---VA-----NHV---------KT 71 (117)
T ss_dssp SCBCCCCCEEEEE--CSSCEEEECCCCBCSSSCCCEEEEEEEETTTE----EEEEE---EE-----EEE---------CS
T ss_pred CccCCCCCEEEEe--cCCEEEEEEeCCCCCCcCceEEEEEEEECCCC----CceeE---cc-----ccc---------Cc
Confidence 3556776666643 357899999865421 135666532110 11111 00 000 01
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC-CC---cceeeE-EECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL-VG---WSDKIQ-FKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~~s-F~T~p~ 322 (638)
....++||+|++.|.|||..-+ .+ +|..-. ++|.+.
T Consensus 72 ~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 72 TLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 2468899999999999998632 23 344443 777654
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.84 E-value=0.37 Score=41.81 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=27.4
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
.++|++|+|+|+|.+||..-+ ..+|....|+|.|.
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 578999999999999997632 24677788888764
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=92.84 E-value=0.47 Score=41.06 Aligned_cols=71 Identities=28% Similarity=0.534 Sum_probs=42.6
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
|.+|..+++.-. +.+++.|+|...... .-.|+|....... ....... + +-...++
T Consensus 4 P~~P~~L~v~~~--t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~-~~~~~~v-----------~---------~~~ts~~ 60 (114)
T 3qwq_B 4 SDVPRDLEVVAA--TPTSLLISWDSGRGSYQYYRITYGETGGNS-PVQEFTV-----------P---------GPVHTAT 60 (114)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEECCSCCCSEEEEEEEESSCSS-CCEEEEE-----------E---------TTCCEEE
T ss_pred CCCCCceEEEec--CCCEEEEEEcCCcCcccEEEEEEEECCCCC-ccEEEEe-----------C---------CCcCEEE
Confidence 556777776654 358999999975432 2367776432210 0000000 1 1123578
Q ss_pred EcCCCCCcEEEEEEee
Q 046241 291 MTGLRPSATFSYRYGS 306 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~ 306 (638)
|+||+|+|.|..+|..
T Consensus 61 l~gL~P~T~Y~v~V~A 76 (114)
T 3qwq_B 61 ISGLKPGVDYTITVYA 76 (114)
T ss_dssp ECSCCTTCEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEE
Confidence 9999999999999975
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.51 E-value=0.6 Score=47.17 Aligned_cols=126 Identities=12% Similarity=0.178 Sum_probs=67.1
Q ss_pred cceEEEEEE--eeeccceEEEEEec---CCC--cceeeccccccccCCCCCCceEEEeecCC----CCCceEEEEEeCCC
Q 046241 172 CSGSIKFHV--INIRTDIEFVFFAG---GFD--TPCILNRTNPINFANPKSPLYGHLSSSDS----TATSMRVTWVSGDK 240 (638)
Q Consensus 172 g~g~~~~~l--~n~r~~~~f~~f~~---~~~--~~~~~~~s~~~~f~~~~~P~~~~ls~~~~----~~~sm~V~W~t~~~ 240 (638)
|..+..|.. +..-..|.|.+... |.. .+..+..... ..|..|..+++....+ ..+++.|+|.....
T Consensus 158 ~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~---~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~ 234 (313)
T 2d9q_B 158 GQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDV---VKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP 234 (313)
T ss_dssp TCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGG---EECCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECccccccceeEEEEEEEECCCCCccCccEEEehhhe---eccCcCceeEEEEecccccCCCCeEEEEECCCCC
Confidence 334555553 22335688877652 111 1222221111 2366776665544321 35899999997532
Q ss_pred C-----CcEEEEc-CCCC-ccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEEeeC----CC
Q 046241 241 E-----PQQVQYG-DGKS-ETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSD----LV 309 (638)
Q Consensus 241 ~-----~~~V~yg-~~~~-~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrvg~~----~~ 309 (638)
. .-.|+|. .... .+..+.. ..+..+...|.+|+|+|+|..||... .+
T Consensus 235 ~~~~~l~Y~v~y~~~~~~~~w~~~~~----------------------~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G 292 (313)
T 2d9q_B 235 GLHINQKCELRHKPQRGEASWALVGP----------------------LPLEALQYELCGLLPATAYTLQIRCIRWPLPG 292 (313)
T ss_dssp GTTSCEEEEEEEEESSSCCCCEEEEE----------------------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCC
T ss_pred CCceeEEEEEEEccCCCCCCcEEccc----------------------ccCcceEEEEeCCCCCCeEEEEEEeeECCCCC
Confidence 1 2357776 3221 1111000 01123567899999999999999752 12
Q ss_pred ---CcceeeEEECCCC
Q 046241 310 ---GWSDKIQFKTPPA 322 (638)
Q Consensus 310 ---~~S~~~sF~T~p~ 322 (638)
.||+...|+|+..
T Consensus 293 ~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 293 HWSDWSPSLELRTTER 308 (313)
T ss_dssp CCCCCCCCEEECCCC-
T ss_pred ccCCCCCccceeCCcc
Confidence 3778888998753
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=92.48 E-value=0.66 Score=45.42 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=25.9
Q ss_pred EEEEcCCCCCcEEEEEEeeC--CC----CcceeeEEECC
Q 046241 288 TAVMTGLRPSATFSYRYGSD--LV----GWSDKIQFKTP 320 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~--~~----~~S~~~sF~T~ 320 (638)
.+.|.+|+|||+|..||... .. .||+...|+|+
T Consensus 196 ~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 196 SVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred EEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 57889999999999999853 11 46777788875
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=92.44 E-value=0.69 Score=44.74 Aligned_cols=85 Identities=14% Similarity=0.304 Sum_probs=52.9
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC------CcEEEEcCCCCc-cceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE------PQQVQYGDGKSE-TSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~------~~~V~yg~~~~~-~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
|..|.-+++.... ..+++.|+|...... .-.|+|...... ....... . +-
T Consensus 122 p~pP~~l~~~~~~-~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~~-------------~---------~~ 178 (227)
T 1eer_B 122 LDAPVGLVARLAD-ESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEI-------------L---------EG 178 (227)
T ss_dssp CCCCEEEEEEECS-STTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEEE-------------C---------TT
T ss_pred cCcCcceEEEEcC-CCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEEE-------------e---------cC
Confidence 5678888877643 257899999876532 135677643221 1100000 0 01
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCC---------CCcceeeEEECC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDL---------VGWSDKIQFKTP 320 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~---------~~~S~~~sF~T~ 320 (638)
...+.|.+|+|||.|..||.... ..||+...|+|+
T Consensus 179 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 179 RTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp CCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred ceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 13578899999999999997531 247788889993
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=92.41 E-value=0.28 Score=46.40 Aligned_cols=92 Identities=18% Similarity=0.325 Sum_probs=53.1
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
.|..|..+++.......+++.|+|...... .-.|+|...... .+..-. .. . ..+-.
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~-----~~~~~~---------~~-~----~~~~~ 163 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAS-----TWSQIP---------PE-D----TASTR 163 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCS-----SCEECC---------GG-G----GCSCC
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCC-----CceEec---------cc-c----ccCcc
Confidence 466787777765433468999999865432 135666543211 011000 00 0 01112
Q ss_pred EEEEEcCCCCCcEEEEEEeeC---C-C---CcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD---L-V---GWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~---~-~---~~S~~~sF~T~p~ 322 (638)
....|+||+|+|+|.+||... + + .||+...|+|.+.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 164 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp SEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred ceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 357899999999999999753 1 1 2677788888753
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=92.26 E-value=0.31 Score=49.00 Aligned_cols=91 Identities=18% Similarity=0.314 Sum_probs=54.6
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
.|..|..+++.......+++.|+|...... .-.|+|...... .+..-. ... ..+-.
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~-----~w~~~~---------~~~-----~~~~~ 259 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAS-----TWSQIP---------PED-----TASTR 259 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCS-----SCEECC---------GGG-----GCSCC
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCC-----CceEEc---------ccc-----CCCce
Confidence 466787777765433468999999965432 235777643211 011000 000 01112
Q ss_pred EEEEEcCCCCCcEEEEEEeeC---C-C---CcceeeEEECCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD---L-V---GWSDKIQFKTPP 321 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~---~-~---~~S~~~sF~T~p 321 (638)
....|++|+|+|.|.+||... + + .||+...|+|+.
T Consensus 260 ~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 260 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 357899999999999999752 1 1 367888899964
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.11 E-value=0.79 Score=40.00 Aligned_cols=72 Identities=22% Similarity=0.419 Sum_probs=43.2
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
|.+|..+++.... .+++.|+|...... .-.|+|........ ...... + +-...+.
T Consensus 29 ~~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~-~~~~~v-----------~---------~~~t~~~ 85 (121)
T 2ocf_D 29 SDVPTKLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSP-VQEFTV-----------P---------GSKSTAT 85 (121)
T ss_dssp CCSCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEETTTCSC-BEEEEE-----------E---------TTCCEEE
T ss_pred CCCCCccEEEecC--CCEEEEEEcCCCCCCcEEEEEEEECCCCCc-cEEEEe-----------C---------CCcCEEE
Confidence 4567777776543 58999999865432 23566754321100 000000 1 1123678
Q ss_pred EcCCCCCcEEEEEEeeC
Q 046241 291 MTGLRPSATFSYRYGSD 307 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~ 307 (638)
|+||+|+|+|.++|..-
T Consensus 86 l~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 86 ISGLKPGVDYTITVYAV 102 (121)
T ss_dssp ECCCCTTCEEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEEE
Confidence 99999999999999864
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=92.09 E-value=1.1 Score=37.46 Aligned_cols=70 Identities=21% Similarity=0.382 Sum_probs=41.7
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCCCC----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGDKE----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~~~----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
.+|..+++.-.. .++++|+|...... .-.|+|....... ...... .|. -...+
T Consensus 6 ~~P~~l~v~~~t--~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~-~~~~~~-----------v~~---------~~t~~ 62 (101)
T 3k2m_C 6 SVPTKLEVVAAT--PTSLLISWDAPMSSSSVYYYRITYGETGGNS-PVQEFT-----------VPY---------SSSTA 62 (101)
T ss_dssp BSSCEEEEEEEE--TTEEEEEECCCCTTSCCCEEEEEEEETTCSS-CCEEEE-----------EET---------TCCEE
T ss_pred CCCcceEEeecC--CCEEEEEecCCCCCCceeeEEEEEEECCCCC-ccEEEE-----------cCC---------CccEE
Confidence 367777776543 57999999875421 1257776432110 000000 011 11367
Q ss_pred EEcCCCCCcEEEEEEee
Q 046241 290 VMTGLRPSATFSYRYGS 306 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~ 306 (638)
+|+||+|+|.|.++|..
T Consensus 63 ~l~~L~p~t~Y~~~V~A 79 (101)
T 3k2m_C 63 TISGLSPGVDYTITVYA 79 (101)
T ss_dssp EECSCCTTCEEEEEEEE
T ss_pred EECCCCCCCEEEEEEEE
Confidence 89999999999999975
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.05 E-value=4.5 Score=39.54 Aligned_cols=102 Identities=16% Similarity=0.200 Sum_probs=57.0
Q ss_pred EEEEEEeeeccc--eEEEEEec---CCCcceeeccccccccCCCCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEE
Q 046241 175 SIKFHVINIRTD--IEFVFFAG---GFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQY 247 (638)
Q Consensus 175 ~~~~~l~n~r~~--~~f~~f~~---~~~~~~~~~~s~~~~f~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~y 247 (638)
...+.|-+++.. |.|.+... |...|..+.. ...+..|..+.+.... .+++.|+|...... .-.|+|
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~-----~t~~~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~ 231 (283)
T 1tdq_A 159 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNA-----RTELDSPRDLMVTASS--ETSISLIWTKASGPIDHYRITF 231 (283)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEE-----ECCCCCCEEEEEEEEC--SSCEEEEEECCCSCCSEEEEEE
T ss_pred cceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEe-----cCCCCCCCccEEeEec--CCEEEEEEeCCCCcccEEEEEE
Confidence 455666666654 66666552 2222322211 1235567666665543 57899999875432 235777
Q ss_pred cCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEEee
Q 046241 248 GDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 248 g~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrvg~ 306 (638)
....... ...+. + +-.....|+||+|++.|.++|..
T Consensus 232 ~~~~~~~-~~~~~-------------~---------~~~~~~~i~~L~p~t~Y~~~V~A 267 (283)
T 1tdq_A 232 TPSSGIS-SEVTV-------------P---------RDRTSYTLTDLEPGAEYIISITA 267 (283)
T ss_dssp ECSSSCC-EEEEE-------------E---------SSCSEEEECCCCTTCCEEEEEEE
T ss_pred EcCCCCe-eEEEe-------------C---------CCccEEEECCCCCCCEEEEEEEE
Confidence 6432211 11110 0 11135689999999999999975
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.90 E-value=0.68 Score=38.95 Aligned_cols=72 Identities=19% Similarity=0.219 Sum_probs=41.1
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--Cc----EEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQ----QVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~----~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
|..|..+.+... ..++++|+|...... .. .|+|...... .+.. |. ..+. ..
T Consensus 8 P~~P~~l~~~~~--~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~-----~w~~---~~----~~~~---------~~ 64 (110)
T 2yuw_A 8 TSPPTLLTVDSV--TDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTE-----DWIV---AN----KDLI---------DK 64 (110)
T ss_dssp SCCCEEEEEEEE--CSSCEEEEEECCSSCCSSCEEEEEEEEEETTCS-----SEEE---CC----SSCC---------CS
T ss_pred CCCCCccEEEec--cCCeEEEEECCCCCCCCCCccEEEEEEEECCCc-----cceE---ec----cccC---------cc
Confidence 556766666543 357999999965422 22 4555432210 1111 10 0011 11
Q ss_pred EEEEEcCCCCCcEEEEEEeeC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
...+++||+|+++|.|||..-
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKAV 85 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEEE
Confidence 356789999999999999763
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=91.70 E-value=0.5 Score=39.15 Aligned_cols=70 Identities=20% Similarity=0.394 Sum_probs=42.0
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCcc-ceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSET-SKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~-~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
+..|..+++.-.. .+++.|+|...... .-.|+|....... ...... + +-...+
T Consensus 5 ~~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~v-------------~---------~~~t~~ 60 (97)
T 3qht_C 5 SSVPTKLEVVAAT--PTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTV-------------P---------GSSSTA 60 (97)
T ss_dssp CCSSSSCEEEEEE--TTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEEEE-------------E---------TTCCEE
T ss_pred CCCCCceEEEecC--CCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEEEe-------------C---------CCcCEE
Confidence 3467767766543 57999999865321 2357775432110 000000 1 112367
Q ss_pred EEcCCCCCcEEEEEEee
Q 046241 290 VMTGLRPSATFSYRYGS 306 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~ 306 (638)
.|+||+|+|.|..+|..
T Consensus 61 ~l~~L~p~t~Y~v~V~A 77 (97)
T 3qht_C 61 TISGLSPGVDYTITVYA 77 (97)
T ss_dssp EECSCCTTCEEEEEEEE
T ss_pred EeCCCCCCCEEEEEEEE
Confidence 89999999999999975
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.67 E-value=0.84 Score=37.27 Aligned_cols=83 Identities=22% Similarity=0.249 Sum_probs=46.0
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+++.... .+++.|+|...... .-.|+|...... . .. .+. . . .+-...+.|+
T Consensus 4 ~P~~l~~~~~~--~~si~lsW~~p~~~i~~Y~v~y~~~~~~--~-~~-----~~~--~---~--------~~~~~~~~l~ 60 (94)
T 1j8k_A 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDG--I-HE-----LFP--A---P--------DGEEDTAELQ 60 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTE--E-EE-----ECC--C---C--------CSSCCEEEEC
T ss_pred CCCccEEEeec--CCEEEEEEcCCCCCcceEEEEEEeCCCC--C-ce-----EEe--c---C--------CCCccEEEeC
Confidence 45556665543 47999999654421 236777542211 0 00 000 0 0 0112367899
Q ss_pred CCCCCcEEEEEEeeCC-CCcce--eeEEECC
Q 046241 293 GLRPSATFSYRYGSDL-VGWSD--KIQFKTP 320 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~~-~~~S~--~~sF~T~ 320 (638)
||+|||+|.++|..-. .+-|. ...++|.
T Consensus 61 ~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 61 GLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp SCCCCSEEEEEEEECSSSCCCCCEEEEEECC
T ss_pred CCCCCCEEEEEEEEEcCCCcCCCEEeEEEec
Confidence 9999999999998642 23332 3446664
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=91.61 E-value=1.8 Score=42.73 Aligned_cols=101 Identities=11% Similarity=0.056 Sum_probs=56.6
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
|.+|..+.+.... .++++|+|...... .-.|+|........ ...... + +-...+.
T Consensus 21 p~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~-~~~~~~-----------~---------~~~~~~~ 77 (290)
T 3r8q_A 21 IPAPTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGP-MKEINL-----------A---------PDSSSVV 77 (290)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEESSSSSC-CEEEEE-----------C---------TTCCEEE
T ss_pred CCCCCceEEEECC--CCEEEEEEeCCCCCeeEEEEEEEeCCCCCc-eEEEEc-----------C---------CCccEEE
Confidence 5577777765543 57999999976432 23677764321110 010000 0 1123678
Q ss_pred EcCCCCCcEEEEEEeeCC-CCcc--eeeEEECCCCCCCCccEEEEEEec
Q 046241 291 MTGLRPSATFSYRYGSDL-VGWS--DKIQFKTPPAGGSSEVLRFLTYGD 336 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~~-~~~S--~~~sF~T~p~~~~~~~~rf~v~GD 336 (638)
++||+|++.|.++|..-. .+.| ....|+|.+.+.....+++...++
T Consensus 78 i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 78 VSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp ECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEECS
T ss_pred eCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEcCC
Confidence 999999999999997532 2222 234578865433323355554444
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.56 E-value=2 Score=39.19 Aligned_cols=71 Identities=21% Similarity=0.284 Sum_probs=41.7
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
.|..|..+.+.... .+++.|+|...... .-.|+|.......- ..... .-
T Consensus 102 ~p~~p~~~~~~~~~--~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~-~~~~~----------------------~~ 156 (197)
T 3lpw_A 102 RPLPPGKITLMDVT--RNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKW-ATCAT----------------------VK 156 (197)
T ss_dssp CCCCCSCEEEEEEC--SSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCC-EEEEE----------------------ES
T ss_pred CCCCCcccEEEecc--CCeEEEEecCCCcCCCCcccEEEEEEEeCCCCce-EEeec----------------------cc
Confidence 45677777765443 57899999965332 12566653221110 00000 00
Q ss_pred EEEEEEcCCCCCcEEEEEEeeC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
.....+++|+|++.|.|+|..-
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A~ 178 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSAQ 178 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEEE
T ss_pred ccEEEeCCcCCCCEEEEEEEEE
Confidence 1246889999999999999863
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.35 E-value=3.1 Score=37.90 Aligned_cols=102 Identities=11% Similarity=0.097 Sum_probs=54.1
Q ss_pred CCCCCCceEEEeecCCCCCceEEEEEeCCC--C----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCc
Q 046241 211 ANPKSPLYGHLSSSDSTATSMRVTWVSGDK--E----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPG 284 (638)
Q Consensus 211 ~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~--~----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g 284 (638)
.-|.+|..+++.... .++++|+|..... . .-.|+|.......- ..... + .
T Consensus 4 ~~P~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~--~~~~~-----------~---------~ 59 (197)
T 3lpw_A 4 DTPGPPQDLKVKEVT--KTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAY--STVAT-----------N---------C 59 (197)
T ss_dssp CSCCCCEEEEEEEEC--SSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSC--EEEEE-----------E---------E
T ss_pred CCCCCCCCcEEEEec--CCEEEEEEcCCccCCCCcccEEEEEEEECCCCcc--EEeec-----------C---------C
Confidence 346678777766443 5799999997632 1 12566654321110 00000 0 0
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeCC-CC---cceeeEEECCC-CCCCCccEEEEEEec
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSDL-VG---WSDKIQFKTPP-AGGSSEVLRFLTYGD 336 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~~sF~T~p-~~~~~~~~rf~v~GD 336 (638)
-.....+++|+|+|.|.|+|..-. .+ +|....+.|.. .+.....+++...++
T Consensus 60 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~ 116 (197)
T 3lpw_A 60 HKTSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTR 116 (197)
T ss_dssp CSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECS
T ss_pred CccEEEEcCCCCCCEEEEEEEEEcCccccCCCCCccceecCCCCCCCcccEEEeccC
Confidence 112568999999999999997532 22 34333344432 122222366555544
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=91.22 E-value=1.4 Score=43.10 Aligned_cols=91 Identities=22% Similarity=0.311 Sum_probs=55.1
Q ss_pred CCCCCCceEEEeecCCCCCceEEEEEeCCCC-------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCC
Q 046241 211 ANPKSPLYGHLSSSDSTATSMRVTWVSGDKE-------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDP 283 (638)
Q Consensus 211 ~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~ 283 (638)
.-|.+|..+.+..... ..++.|+|...... .-.|+|........ -..... .
T Consensus 111 VKPdPP~nLtv~~~~~-~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~-W~~v~~-----------~--------- 168 (223)
T 3up1_A 111 VKPEAPFDLSVVYREG-ANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENK-WTHVNL-----------S--------- 168 (223)
T ss_dssp BCCCCCEEEEEEEETT-TTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSC-CEEEEE-----------S---------
T ss_pred EEcCCCcceEEEEEcC-CCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCc-eEEEEe-----------c---------
Confidence 3477898888877653 46799999976421 23567754321100 000000 0
Q ss_pred ceEEEEEEcCCCCCcEEEEEEeeCC-----C---CcceeeEEECCCCC
Q 046241 284 GYIHTAVMTGLRPSATFSYRYGSDL-----V---GWSDKIQFKTPPAG 323 (638)
Q Consensus 284 g~~h~a~l~gL~P~T~Y~Yrvg~~~-----~---~~S~~~sF~T~p~~ 323 (638)
.......+.+|+|+|+|..||.... + .||+...|+|++..
T Consensus 169 ~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 169 STKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred CceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 1113455789999999999997521 1 46778899998654
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.17 E-value=0.68 Score=39.82 Aligned_cols=20 Identities=20% Similarity=0.421 Sum_probs=17.5
Q ss_pred EEEEcCCCCCcEEEEEEeeC
Q 046241 288 TAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
..+++||+|+++|.|||..-
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~ 88 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAK 88 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEE
Confidence 46789999999999999863
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.14 E-value=1.7 Score=37.77 Aligned_cols=84 Identities=20% Similarity=0.242 Sum_probs=48.0
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+++... . +++.|+|.-.... .-.|+|..+.. ..... . .+ +-..
T Consensus 28 P~~P~~l~~~~~--~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~~-~~~~~-----------~--~~---------~~~~ 81 (126)
T 1x5i_A 28 PEVPSSLHVRPL--V-TSIVVSWTPPENQNIVVRGYAIGYGIGSP-HAQTI-----------K--VD---------YKQR 81 (126)
T ss_dssp CCSCSEEEEEEE--T-TEEEEEEECCSCTTBCCCEEEEEECSSCG-GGEEE-----------E--CC---------TTCC
T ss_pred CCCCCeeEEEec--C-CEEEEEEcCCCCCCCCEeEEEEEEEcCCC-CceEE-----------E--eC---------CCee
Confidence 556777777665 2 7999999976432 12566753211 00000 0 01 1223
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-CCcce--eeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-VGWSD--KIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~~~S~--~~sF~T~p~ 322 (638)
..+|+||+|+|+|.++|..-+ .+.++ ...++|.+.
T Consensus 82 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~ 119 (126)
T 1x5i_A 82 YYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 119 (126)
T ss_dssp EEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEecccC
Confidence 578999999999999997632 23322 234666543
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=91.01 E-value=1.2 Score=37.82 Aligned_cols=87 Identities=14% Similarity=0.107 Sum_probs=45.9
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCCCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
.|.+|..+...... ..+++.|+|..........-|+...... .|.. .+ .+.. .. ....
T Consensus 4 ~P~aP~~l~a~~~~-~~~~v~LsW~~~~~~~~Y~VyR~~~~~~----~~~~---i~-----~~~~-----~t----sy~d 61 (103)
T 3mpc_A 4 APAFPTGLSAVLDS-SGNTANLTWNAAPGANSYNVKRSTKSGG----PYTT---IA-----TNIT-----ST----NYTD 61 (103)
T ss_dssp CCCCCEEEEEEECT-TSCCEEEEEECCTTCSEEEEEEESSTTC----CCEE---EE-----EEEC-----SS----EEEE
T ss_pred CCCCCceeEEEEeC-CCCEEEEEEECCCCCCEEEEEEecCCCC----CcEE---Ee-----ecCC-----CC----EEEE
Confidence 46678766665532 2468999999865555544444221100 0110 00 0000 01 2345
Q ss_pred cCCCCCcEEEEEEeeC-CC---CcceeeEEECC
Q 046241 292 TGLRPSATFSYRYGSD-LV---GWSDKIQFKTP 320 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~-~~---~~S~~~sF~T~ 320 (638)
++|+||++|+|+|..- .. ..|..-+.+++
T Consensus 62 ~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~ 94 (103)
T 3mpc_A 62 TGVATGTKYYYVVSAVSNGVETLNSAEAILQYP 94 (103)
T ss_dssp TTCCTTCCCEEEEEEEETTEECCCCCCEECBCC
T ss_pred CCCCCCCEEEEEEEEEeCcCCcCCCccEEEECC
Confidence 8999999999999752 11 23445555444
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=90.98 E-value=3.8 Score=41.92 Aligned_cols=116 Identities=16% Similarity=0.046 Sum_probs=61.3
Q ss_pred EEEEEeeeccc--eEEEEEec---CCCcceeeccccccccCCCCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEc
Q 046241 176 IKFHVINIRTD--IEFVFFAG---GFDTPCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYG 248 (638)
Q Consensus 176 ~~~~l~n~r~~--~~f~~f~~---~~~~~~~~~~s~~~~f~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg 248 (638)
..+.|-+++.. |.|.+... |...|.... ....|..|..+.+... ..+++.|+|...... .-.|+|.
T Consensus 241 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~-----~~t~p~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~Y~v~~~ 313 (375)
T 3t1w_A 241 NAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR-----QKTGLDSPTGIDFSDI--TANSFTVHWIAPRATITGYRIRHH 313 (375)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCEEEE-----EECCCCCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEEcCCCcCCceeeE-----EecCCCCCCccEeeec--cCCEEEEEECCCCcceeeEEEEEE
Confidence 44555555544 66666542 222222221 1224567766665433 468999999975432 2367776
Q ss_pred CCCC-ccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEEeeC-CCCcce--eeEEECC
Q 046241 249 DGKS-ETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSD-LVGWSD--KIQFKTP 320 (638)
Q Consensus 249 ~~~~-~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~ 320 (638)
.... ........ + +-.....++||+||+.|.++|..- ..+.|+ ...++|.
T Consensus 314 ~~~~~~~~~~~~~-------------~---------~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~~~ 367 (375)
T 3t1w_A 314 PEHFSGRPREDRV-------------P---------HSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTV 367 (375)
T ss_dssp ETTCCSSCEEEEE-------------E---------TTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred ECCCCCcceeEEc-------------C---------CCccEEEECCCCCCCEEEEEEEEECCCCCCCceeeeeEEe
Confidence 4332 11111100 0 111256899999999999999753 223443 3445554
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.97 E-value=0.55 Score=40.44 Aligned_cols=85 Identities=12% Similarity=0.059 Sum_probs=49.4
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEE
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHT 288 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~ 288 (638)
..|..+.+.. ..+++.|+|.-.... .-.|+|......+.....- . + +-..+
T Consensus 9 ~pP~~l~v~~---~~~sv~L~W~pP~~~~~~I~gY~vey~~~~~~W~~~~~~----~--------~---------~~~t~ 64 (108)
T 1v5j_A 9 SPPRGLVAVR---TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPA----V--------A---------GTETE 64 (108)
T ss_dssp CCCEEEEEEE---CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEEEEEE----E--------C---------SSCCE
T ss_pred CCCcceEEEE---eCCEEEEEECCCCCCCCCCcEEEEEEEeCCCCcEEeeee----c--------C---------CCcCE
Confidence 4666666654 247899999976532 2368887532222111100 0 0 11235
Q ss_pred EEEcCCCCCcEEEEEEeeCC-CC---cceeeEEECCCC
Q 046241 289 AVMTGLRPSATFSYRYGSDL-VG---WSDKIQFKTPPA 322 (638)
Q Consensus 289 a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~~sF~T~p~ 322 (638)
..+.+|.|+++|.+||..-+ .+ .|+...++|...
T Consensus 65 ~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 65 LLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 67999999999999997532 22 355556666543
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.90 E-value=0.75 Score=38.82 Aligned_cols=73 Identities=18% Similarity=0.203 Sum_probs=42.2
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC--C----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE--P----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
-|..|..+.+.... .++++|+|...... . -.|+|...... .+.. |. ..+. -
T Consensus 8 ~P~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~-----~w~~---~~----~~~~---------~ 64 (111)
T 1x5y_A 8 PTSAPQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSE-----EWVP---AN----KEPV---------E 64 (111)
T ss_dssp CCCCCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCC-----CCEE---SS----SSCB---------S
T ss_pred CCcCCCCCEEEecc--CCEEEEEECCCCcCCCCcccEEEEEEEECCCC-----ceEE---cc----ccCC---------c
Confidence 35677666665543 57999999965321 1 24666432211 1110 11 0011 1
Q ss_pred EEEEEEcCCCCCcEEEEEEeeC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
....++++|+|+++|.|||..-
T Consensus 65 ~~~~~v~~L~p~t~Y~frV~A~ 86 (111)
T 1x5y_A 65 RCGFTVKDLPTGARILFRVVGV 86 (111)
T ss_dssp SSEEEEECCCTTCCEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEE
Confidence 2356789999999999999863
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=90.88 E-value=0.96 Score=46.35 Aligned_cols=89 Identities=12% Similarity=0.121 Sum_probs=50.2
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCC--C-CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDK--E-PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~--~-~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
|..|..+.+....+ .++++|+|..... . .-.|+|.......... +.. .. + +.....
T Consensus 2 p~~P~~l~~~~~~~-~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~--~~-------~---------~~~~~~ 60 (368)
T 1fnf_A 2 LSPPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEE--VV-------H---------ADQSSC 60 (368)
T ss_dssp CCCCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSSCC--EEE--EE-------C---------TTCCEE
T ss_pred CCCCcceEEEecCC-CcEEEEEEeCCCCCCceEEEEEEEECCCCCCce--eEE--Ee-------c---------CCcCEE
Confidence 45677777765432 2469999997642 1 2367775432211100 000 00 0 112357
Q ss_pred EEcCCCCCcEEEEEEeeC-CCCcceeeEEECCCC
Q 046241 290 VMTGLRPSATFSYRYGSD-LVGWSDKIQFKTPPA 322 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~-~~~~S~~~sF~T~p~ 322 (638)
.+++|+|+|.|.|||..- ..+.|...+..+.+.
T Consensus 61 ~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~ 94 (368)
T 1fnf_A 61 TFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPA 94 (368)
T ss_dssp ECCCCCTTSCEEEEEEEEETTEECCCEEEEECCC
T ss_pred EECCCCCCCEEEEEEEEEcCCCccCceeeeecCC
Confidence 899999999999999753 335565555555443
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.84 E-value=1.3 Score=37.65 Aligned_cols=72 Identities=15% Similarity=0.196 Sum_probs=41.1
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+++... ..+++.|+|....... -.|+|........ .+.. . .++-..
T Consensus 18 P~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~---------~~~~-~-----------~~~~~~ 74 (119)
T 1wfn_A 18 PGPVGHLSFSEI--LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---------RVTH-Y-----------LPNVTL 74 (119)
T ss_dssp CCCCSCCEEESC--CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---------CCCE-E-----------ECSSCC
T ss_pred CCCCCceEEEEC--CCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCc---------eEEE-E-----------eCCCce
Confidence 556766665543 3579999998654321 2455543221100 0000 0 011224
Q ss_pred EEEEcCCCCCcEEEEEEeeC
Q 046241 288 TAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
.+.|++|+|+|.|.+||..-
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~ 94 (119)
T 1wfn_A 75 EYRVTGLTALTTYTIEVAAM 94 (119)
T ss_dssp EEEEESCCTTCEEEEEEEEE
T ss_pred EEEEcCCCCCCEEEEEEEEE
Confidence 67899999999999999763
|
| >2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.67 E-value=0.29 Score=42.92 Aligned_cols=40 Identities=13% Similarity=0.106 Sum_probs=31.1
Q ss_pred CeeEEEecCCC-CCCCCCEEEEEEecCCCCCCCCEEEEEcC
Q 046241 69 PYLQINVSKSS-DLSDDEFVTVTVSGVLLPAESDWVAMISP 108 (638)
Q Consensus 69 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~p 108 (638)
..-.|++++.. .|-++|.++|.|.=-..-.+.||||||--
T Consensus 33 sRSsLt~S~~~ytiG~~q~lvI~WDIKEev~a~DWIGLy~i 73 (138)
T 2lfe_A 33 SRSSLTASMYEYTLGQAQNLIIFWDIKEEVDPSDWIGLYHI 73 (138)
T ss_dssp CCCEEEESCSEEETTCSCCEEEEEECCSCCCTTCEEEEEEC
T ss_pred ccceeEEEeeEEEecCCCcEEEEEeccCccCccceEEEEEe
Confidence 34456777655 77888899999996555689999999964
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.37 E-value=1 Score=38.55 Aligned_cols=68 Identities=15% Similarity=0.254 Sum_probs=41.0
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+++... . +++.|+|....... -.|+|..+.. ....... + +-..
T Consensus 18 P~~P~~l~~~~~--~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~~~-------------~---------~~~~ 71 (116)
T 2edb_A 18 PDQPSSLHVRPQ--T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETVRV-------------D---------SKQR 71 (116)
T ss_dssp CCCCSCEEEEEC--S-SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEEEE-------------E---------TTCC
T ss_pred CCCCCCeEEEEC--C-CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEEEe-------------C---------CCee
Confidence 456777776654 3 79999998653321 2566653211 1000000 0 1123
Q ss_pred EEEEcCCCCCcEEEEEEee
Q 046241 288 TAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~ 306 (638)
..+|+||+|+|+|.+||..
T Consensus 72 ~~~l~~L~p~t~Y~~~V~A 90 (116)
T 2edb_A 72 YYSIERLESSSHYVISLKA 90 (116)
T ss_dssp EEEECSCCSSSBEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 5689999999999999975
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.29 E-value=0.8 Score=39.34 Aligned_cols=77 Identities=19% Similarity=0.231 Sum_probs=44.3
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
-|..|..+++.... .+++.|+|...... .-.|+|....... +.. +. ... -
T Consensus 17 ~P~~P~~l~~~~~~--~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~-----w~~---~~-----~~~---------~ 72 (120)
T 2yux_A 17 RPGPPQIVKIEDVW--GENVALTWTPPKDDGNAAITGYTIQKADKKSME-----WFT---VI-----EHY---------H 72 (120)
T ss_dssp CCCCCSCEEEEEEE--TTEEEEEECCCSCCCSSCCCCCCEEEEETTTCC-----CEE---EE-----SSC---------C
T ss_pred CCCcCCCCEEEEec--CCEEEEEEcCCCcCCCCCceEEEEEEEECCCCc-----eEE---ee-----ecC---------C
Confidence 45677777665443 47999999865321 2357775432110 100 00 000 1
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCC-CCcc
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDL-VGWS 312 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~-~~~S 312 (638)
.....+++|+|++.|.|||...+ .|+|
T Consensus 73 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s 100 (120)
T 2yux_A 73 RTSATITELVIGNEYYFRVFSENMCGLS 100 (120)
T ss_dssp SSCCEECCCCSSEEEEEEECCCSSSCSC
T ss_pred cCEEEECCCCCCCEEEEEEEEeeCCcCC
Confidence 12357899999999999998643 2444
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=90.12 E-value=3 Score=42.29 Aligned_cols=86 Identities=16% Similarity=0.202 Sum_probs=50.9
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCc
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPG 284 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g 284 (638)
.|..|..+++.......+++.|+|...... .-.|+|...... .+..-. .+ +
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~-----~W~~~~--------~~---------~ 253 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSK-----TFTTWM--------VK---------D 253 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCS-----CCEEEE--------CG---------G
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCC-----CCEEEc--------cc---------C
Confidence 367787777776543457999999976531 125677543211 011000 00 0
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeCC----C---CcceeeEEEC
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSDL----V---GWSDKIQFKT 319 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~~----~---~~S~~~sF~T 319 (638)
......|.+|+|++.|..||...+ + .||+...++|
T Consensus 254 ~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 254 LQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp GCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 113568999999999999997632 1 3555555555
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.81 E-value=0.35 Score=42.52 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=28.5
Q ss_pred EEEEcCCCCCcEEEEEEeeCCC----CcceeeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDLV----GWSDKIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~~----~~S~~~sF~T~p~~ 323 (638)
.++++||+|+|+|.+||..-+. .||+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 4689999999999999986432 36778889998653
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.75 E-value=1.9 Score=37.01 Aligned_cols=23 Identities=30% Similarity=0.408 Sum_probs=19.2
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeC
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
-...++++||+|+|.|.+||..-
T Consensus 69 ~~~~~~v~~L~p~t~Y~FRV~A~ 91 (115)
T 2ic2_A 69 KSFTASVTDLKPQHTYRFRILAV 91 (115)
T ss_dssp EEEEEEECSCCSSEEEEEEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEEEEE
Confidence 34567899999999999999863
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.62 E-value=1.8 Score=36.14 Aligned_cols=82 Identities=18% Similarity=0.371 Sum_probs=53.9
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCcc---CCceEE
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWH---DPGYIH 287 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~---~~g~~h 287 (638)
..|.|+-++...+-.++-.|.|...... .-.+.|+..... + -|+ -|+.+.
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~-g-----------------------~Wke~~Ip~h~n 61 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSV-G-----------------------RWKEATIPGHLN 61 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCS-S-----------------------CCEEEEECSSCC
T ss_pred CcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCC-C-----------------------ceeEEEecCccc
Confidence 3577888877766689999999987643 224455432110 0 121 145566
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-CCccee--eEEEC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-VGWSDK--IQFKT 319 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~~~S~~--~sF~T 319 (638)
.-+|+||+||..|.=+|-+-. .||++. +.|.|
T Consensus 62 SYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 62 SYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred eEEEecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 778999999999999998743 478764 44554
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=89.59 E-value=0.86 Score=49.99 Aligned_cols=127 Identities=16% Similarity=0.209 Sum_probs=70.4
Q ss_pred ceEEEEEEeeeccceEEEEEec-CCC-cc--eeeccccccccCCCCCCceEEEeecCCCCCceEEEEEeCCCC-----Cc
Q 046241 173 SGSIKFHVINIRTDIEFVFFAG-GFD-TP--CILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQ 243 (638)
Q Consensus 173 ~g~~~~~l~n~r~~~~f~~f~~-~~~-~~--~~~~~s~~~~f~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~ 243 (638)
..+..|.+...-..|.|.+..- ++. .+ ..+...+ -..|..|..+++... ..+++.|+|...... .-
T Consensus 346 ~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~S~~~~~~~~---~v~P~PP~nl~v~~~--s~~sl~LsW~pP~~~~g~~l~Y 420 (488)
T 2q7n_A 346 TYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVINVTE---RVAPHDPTSLKVKDI--NSTVVTFSWYLPGNFTKINLLC 420 (488)
T ss_dssp CEEEEEECCSSCCCCEEEEEEEETTEEEEEEEECCGGG---TBCCCCCEEEEEEEC--STTCEEEEEEEEEECSSSEEEE
T ss_pred eEEEEEcCCCCccEEEEEEEEEeCCCCccceEEEEecC---CCCCCCCeEEEEEec--CCCEEEEEEeCCCCCCCcceEE
Confidence 3456666554336678877652 111 11 1111111 124677877776553 357999999976422 23
Q ss_pred EEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEEeeC--C----CCcceeeEE
Q 046241 244 QVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSD--L----VGWSDKIQF 317 (638)
Q Consensus 244 ~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrvg~~--~----~~~S~~~sF 317 (638)
.|+|....... ........ +. ..-.+.+.|.+|+|+|+|..||... + ..||+...|
T Consensus 421 eV~Yr~~~~~~-w~~~~~~~----------~~-------~~~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~ 482 (488)
T 2q7n_A 421 QIEICKANSKK-EVRNATIR----------GA-------EDSTYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRH 482 (488)
T ss_dssp EEEEBCTTSCC-EEEEEEEE----------CC-------EEEEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCB
T ss_pred EEEEEECCCCC-ceEEEEEe----------cC-------CCcEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeE
Confidence 57776533211 00000000 00 0134567999999999999998742 1 257778889
Q ss_pred ECCCC
Q 046241 318 KTPPA 322 (638)
Q Consensus 318 ~T~p~ 322 (638)
+|++.
T Consensus 483 ~T~e~ 487 (488)
T 2q7n_A 483 LTTEA 487 (488)
T ss_dssp CCCCC
T ss_pred ECCCC
Confidence 99764
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=89.51 E-value=1.4 Score=41.60 Aligned_cols=69 Identities=22% Similarity=0.392 Sum_probs=39.8
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
.|..+++... +.+++.|+|...... .-.|+|......... .... .|. -...++|+
T Consensus 106 ~P~~l~v~~~--t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~-~~~~-----------v~~---------~~t~~~l~ 162 (195)
T 2qbw_A 106 VPTNLEVVAA--TPTSLLISWDASYYGVSYYRITYGETGGNSPV-QEFT-----------VPY---------SSSTATIS 162 (195)
T ss_dssp SSCCCEEEEE--ETTEEEEECCCCCSSCSEEEEEEEETTCCSCC-EEEE-----------EET---------TCSEEEEC
T ss_pred CCcccEEEeC--CCCEEEEEEeCCCCCccEEEEEEEECCCCCcc-eEEE-----------eCC---------CCCEEEeC
Confidence 4555555544 357999999765422 235667532211100 0000 011 11367999
Q ss_pred CCCCCcEEEEEEee
Q 046241 293 GLRPSATFSYRYGS 306 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~ 306 (638)
||+|+|+|.++|..
T Consensus 163 gL~p~t~Y~~~V~A 176 (195)
T 2qbw_A 163 GLKPGVDYTITVYA 176 (195)
T ss_dssp SCCTTCEEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999986
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=89.36 E-value=2 Score=44.09 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=54.3
Q ss_pred CCCceEEEeecCCCCC-ceEEEEEeCCC--CC-cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 214 KSPLYGHLSSSDSTAT-SMRVTWVSGDK--EP-QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~-sm~V~W~t~~~--~~-~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
.+|..+.+.... .+ ++.|+|..... .. -.|+|............... + +-....
T Consensus 4 ~~P~~l~~~~~~--~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~-----------~---------~~~~~~ 61 (375)
T 3t1w_A 4 SPPTNLHLEANP--DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVV-----------H---------ADQSSC 61 (375)
T ss_dssp CCCEEEEEEEET--TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEEE-----------E---------TTCCEE
T ss_pred CCCCccEEEecC--CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEEc-----------C---------CCccEE
Confidence 356666666543 46 89999997642 22 36777543211110000000 0 112357
Q ss_pred EEcCCCCCcEEEEEEeeC-CCCcceeeEEECCCCCCCCccEEEEEEec
Q 046241 290 VMTGLRPSATFSYRYGSD-LVGWSDKIQFKTPPAGGSSEVLRFLTYGD 336 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~-~~~~S~~~sF~T~p~~~~~~~~rf~v~GD 336 (638)
.|+||+|+|.|.++|..- +.++|....+.+.+.......+++...++
T Consensus 62 ~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p~p~~l~~~~~~~ 109 (375)
T 3t1w_A 62 TFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVPQLTDLSFVDITD 109 (375)
T ss_dssp EECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCCCCSCCEEECCCS
T ss_pred EEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCCCCceEEEEecCC
Confidence 899999999999999763 33566655555543221122255544444
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.33 E-value=0.86 Score=38.29 Aligned_cols=71 Identities=23% Similarity=0.437 Sum_probs=42.4
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCc-cceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSE-TSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~-~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
+.+|..+++.-. +.++++|+|...... .-.|+|...... ....... + +-.
T Consensus 8 ~~~P~~l~v~~~--t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v-------------~---------~~~ 63 (103)
T 3t04_D 8 SSVPTKLEVVDA--TPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTV-------------P---------GYY 63 (103)
T ss_dssp CCCCCSCEEEEE--ETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEEEE-------------E---------TTC
T ss_pred CCCCceeEEEec--CCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEEEc-------------C---------CCc
Confidence 346767776654 358999999865521 125777643211 0000000 1 112
Q ss_pred EEEEEcCCCCCcEEEEEEeeC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
..++|+||+|+|.|..+|..-
T Consensus 64 ts~~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 64 STATISGLKPGVDYTITVYAY 84 (103)
T ss_dssp CEEEECSCCTTCCEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEE
Confidence 367899999999999999753
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.12 E-value=0.87 Score=44.06 Aligned_cols=91 Identities=13% Similarity=0.219 Sum_probs=52.9
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC----------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCcc
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE----------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWH 281 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~----------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~ 281 (638)
-|.+|..+.+.. .+.+.|+|...... .-.|+|......+....+.....
T Consensus 100 kp~PP~nltv~~----~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~~W~~~~~~~~~~----------------- 158 (219)
T 3tgx_A 100 KPAPPFDVTVTF----SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGDPWAVSPRRKLIS----------------- 158 (219)
T ss_dssp CCCCCEEEEEEE----SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTSCTTSCCEEEEEC-----------------
T ss_pred EeCCCCceEEEe----CCCEEEEEeCCcCCccccccccCEEEEEEEecCCCCceecccceeEe-----------------
Confidence 466787666652 35899999986431 23567764432221110000000
Q ss_pred CCceEEEEEEcCCCCCcEEEEEEeeC---C----C---CcceeeEEECCCCC
Q 046241 282 DPGYIHTAVMTGLRPSATFSYRYGSD---L----V---GWSDKIQFKTPPAG 323 (638)
Q Consensus 282 ~~g~~h~a~l~gL~P~T~Y~Yrvg~~---~----~---~~S~~~sF~T~p~~ 323 (638)
..+....+.+.+|.||++|..||... + + .||+...|+|++..
T Consensus 159 ~~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 159 VDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp SSCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred cCCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 01223456788999999999999742 1 2 36888999998753
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.04 E-value=1.3 Score=41.36 Aligned_cols=85 Identities=18% Similarity=0.312 Sum_probs=46.7
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
.|..+.+.-.....++++|+|...... .-.|+|........ ...... + +-...+.|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~-~~~~~~-----------~---------~~~~~~~i 60 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGR-WKEATI-----------P---------GHLNSYTI 60 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSC-CEEEEE-----------C---------TTCCEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCc-eEEEec-----------C---------CCccEEEe
Confidence 455555544333368999999976321 23577764221100 000000 1 11136789
Q ss_pred cCCCCCcEEEEEEeeCC-CCcce--eeEEECC
Q 046241 292 TGLRPSATFSYRYGSDL-VGWSD--KIQFKTP 320 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~~-~~~S~--~~sF~T~ 320 (638)
+||+|+|.|.++|..-. .+.+. ...|+|.
T Consensus 61 ~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~ 92 (201)
T 2ha1_A 61 KGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (201)
T ss_dssp CSCCTTEEEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred cCCCCCCEEEEEEEEEecccccCceeEEEecC
Confidence 99999999999998642 23322 3456654
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=88.94 E-value=17 Score=36.64 Aligned_cols=99 Identities=16% Similarity=0.072 Sum_probs=54.3
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccc-eeeEeecCCcccccccCCCCCCcCccCCceEEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETS-KVTTFTQDDMCNATALQSPAKDFGWHDPGYIHT 288 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~-~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~ 288 (638)
.+..|..+.+... ..+++.|+|...... .-.|+|........ ..... + +-...
T Consensus 185 ~~~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~---------~~~~~ 240 (368)
T 1fnf_A 185 GLDSPTGIDFSDI--TANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRV-------------P---------HSRNS 240 (368)
T ss_dssp CCCCCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEEEE-------------E---------TTCCE
T ss_pred CCCCCCccEEEEc--cCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccEEEe-------------C---------CCcCE
Confidence 3456765555443 358999999875432 23677764322110 00000 1 11135
Q ss_pred EEEcCCCCCcEEEEEEeeCC-CCcc--eeeEEECCCCCCCCccEEEEEEec
Q 046241 289 AVMTGLRPSATFSYRYGSDL-VGWS--DKIQFKTPPAGGSSEVLRFLTYGD 336 (638)
Q Consensus 289 a~l~gL~P~T~Y~Yrvg~~~-~~~S--~~~sF~T~p~~~~~~~~rf~v~GD 336 (638)
..++||+|++.|.++|..-. .+.+ ....+.|+|.+. ..+++...++
T Consensus 241 ~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~P--~~l~~~~~~~ 289 (368)
T 1fnf_A 241 ITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVP--RDLEVVAATP 289 (368)
T ss_dssp EEEESCCTTCEEEEEEEEEETTEECCCEEEEEECCCCSC--EEEEEEEEET
T ss_pred EEECCCCCCCEEEEEEEEEeCCccCCcccccccCCCCCC--CeeEEEecCC
Confidence 68899999999999997532 2222 234466766532 2266655554
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=88.82 E-value=1.3 Score=41.27 Aligned_cols=86 Identities=15% Similarity=0.199 Sum_probs=48.5
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCc--cceeeEeecCCcccccccCCCCCCcCccCCc
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSE--TSKVTTFTQDDMCNATALQSPAKDFGWHDPG 284 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~--~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g 284 (638)
-|..|..+.+.. ..++++|+|...... .-.|+|...... +...... .+..
T Consensus 5 ~P~~P~~~~~~~---~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~------------~~~~-------- 61 (205)
T 1cfb_A 5 VPNAPKLTGITC---QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK------------VPNT-------- 61 (205)
T ss_dssp CCCCCEEEEEEE---CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE------------EETT--------
T ss_pred CCCCCCCcEEEe---cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeec------------cCCC--------
Confidence 356787777766 368999999976321 135677542211 1000000 0111
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeCC----CCcc-eeeEEECCCC
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSDL----VGWS-DKIQFKTPPA 322 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S-~~~sF~T~p~ 322 (638)
.....+ ||+|+|.|.+||..-+ ..+| ....++|.+.
T Consensus 62 -~~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 62 -DSSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp -CSEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred -ceEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 113345 9999999999997521 1355 4567888653
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.50 E-value=1.1 Score=49.08 Aligned_cols=126 Identities=16% Similarity=0.223 Sum_probs=70.5
Q ss_pred eEEEEEEeeeccceEEEEEec-CCCc---ceeeccccccccCCCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcE
Q 046241 174 GSIKFHVINIRTDIEFVFFAG-GFDT---PCILNRTNPINFANPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQ 244 (638)
Q Consensus 174 g~~~~~l~n~r~~~~f~~f~~-~~~~---~~~~~~s~~~~f~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~ 244 (638)
-+..|........|.|.+-.. ++.. ...+... .-..|.+|..+++... ..+++.|+|...... .-.
T Consensus 342 ~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~~~~---~~VkP~PP~nl~v~~~--~stsl~LsW~~P~~~~~~~L~Ye 416 (483)
T 3e0g_A 342 YQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVNIT---EKVYPHTPTSFKVKDI--NSTAVKLSWHLPGNFAKINFLCE 416 (483)
T ss_dssp EEEEEECCTTCCCEEEEEEEECSSCEEEEEEEECGG---GGBCCCCCEEEEECCS--SSSSCCEEEECCSCCTTSBCCCE
T ss_pred EEEEEccCCCCcEEEEEEEEEeCCCCcccceEEEec---cccCCCCCeeeEEEEe--cCCeEEEEECCCCCCCCceEEEE
Confidence 355666554455677776552 1211 1111111 2235778877777543 357899999976431 347
Q ss_pred EEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEEeeCC------CCcceeeEEE
Q 046241 245 VQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDL------VGWSDKIQFK 318 (638)
Q Consensus 245 V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrvg~~~------~~~S~~~sF~ 318 (638)
|+|........ ...++. +.. ..-.+.+.|.+|+|+|+|..||.... ..||+...|+
T Consensus 417 VrYr~~~~~~~-~~~vsv-----------~~~------~~~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~ 478 (483)
T 3e0g_A 417 IEIKKSNSVQE-QRNVTI-----------QGV------ENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHL 478 (483)
T ss_dssp EEEECSSSCCC-EEECCC-----------BCC------SSSBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCC
T ss_pred EEEEECCCCCc-eEEEEE-----------ecc------CCceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeE
Confidence 88875432210 011100 000 00123467899999999999998532 2477888899
Q ss_pred CCCC
Q 046241 319 TPPA 322 (638)
Q Consensus 319 T~p~ 322 (638)
|+.+
T Consensus 479 T~E~ 482 (483)
T 3e0g_A 479 TTEA 482 (483)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9753
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=87.94 E-value=0.7 Score=44.51 Aligned_cols=92 Identities=16% Similarity=0.263 Sum_probs=49.4
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+++.... .+++.|+|...... .-.|+|............... ... ......
T Consensus 99 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~--------~~~--------~~~~~~ 160 (234)
T 3f7q_A 99 PSEPGRLAFNVVS--STVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKK--------VLV--------DNPKNR 160 (234)
T ss_dssp CCCCCCCEEEECS--SSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEE--------CCC--------SCTTCC
T ss_pred CCCCCccEEEEec--CCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceE--------EEe--------cCCcce
Confidence 5567666666543 57899999864321 125666532211100000000 000 011123
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-C---Ccce-eeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-V---GWSD-KIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~-~~sF~T~p~ 322 (638)
...|+||+|+|.|.++|..-+ . .+|. ...|+|.+.
T Consensus 161 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 161 MLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 578999999999999997532 1 2454 466777654
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.28 E-value=9 Score=35.59 Aligned_cols=37 Identities=30% Similarity=0.483 Sum_probs=27.5
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPAGG 324 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~~~ 324 (638)
...|.+|+|++.|.|||...+ . .+|....|+|+|..+
T Consensus 174 ~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 174 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp EEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred cEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 568999999999999997532 2 356788899988653
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.83 E-value=7.8 Score=43.89 Aligned_cols=37 Identities=11% Similarity=0.277 Sum_probs=27.1
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCC----CCccee---eEEECCCC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDL----VGWSDK---IQFKTPPA 322 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~---~sF~T~p~ 322 (638)
...++|+||+|+|.|.+||..-+ ..+|.. ..++|.+.
T Consensus 333 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 333 QNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred eeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 35788999999999999997532 134544 67888654
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.77 E-value=0.47 Score=39.99 Aligned_cols=73 Identities=14% Similarity=0.222 Sum_probs=43.3
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
.|..|..+++.-.. .+++.|+|...... .-.|+|........ ..+ +..+ +-...+
T Consensus 7 ~p~~P~~l~v~~~t--~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~--------~~~----~~v~---------~~~~~~ 63 (105)
T 2ekj_A 7 GRSPPSNLALASET--PDSLQVSWTPPLGRVLHYWLTYAPASGLGP--------EKS----VSVP---------GARSHV 63 (105)
T ss_dssp TCCCCEEEEEEEEE--TTEEEEEEECCSSCCSBBCBBCCCTTSCSC--------CCC----BCCB---------TTSSEE
T ss_pred CCCCCCceEEEeCC--CCEEEEEEeCCCCcceEEEEEEEECCCCCc--------cEE----EEeC---------CCcCEE
Confidence 35678777776543 58999999976431 23455643211100 000 0001 122467
Q ss_pred EEcCCCCCcEEEEEEeeC
Q 046241 290 VMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~ 307 (638)
+|+||+|+|.|.++|..-
T Consensus 64 ~l~~L~p~t~Y~~~V~A~ 81 (105)
T 2ekj_A 64 TLPDLQAATKYRVLVSAI 81 (105)
T ss_dssp EECSCCSSCCCBCBBCBB
T ss_pred EeCCCCCCCEEEEEEEEE
Confidence 899999999999999763
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=86.47 E-value=0.66 Score=39.03 Aligned_cols=62 Identities=19% Similarity=0.285 Sum_probs=37.4
Q ss_pred cCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEE
Q 046241 224 SDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFS 301 (638)
Q Consensus 224 ~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~ 301 (638)
.+-+.++++|+|...... .-.|+|......... .... -+|-...+.|+||+|||+|.
T Consensus 15 t~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~-~~~~--------------------v~g~~~s~~l~~L~PgT~Y~ 73 (95)
T 2h41_A 15 TEITASSFVVSWVSASDTVSGFRVEYELSEEGDEP-QYLD--------------------LPSTATSVNIPDLLPGRKYI 73 (95)
T ss_dssp CCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCC-EEEE--------------------EETTCCEEEECSCCTTCEEE
T ss_pred EEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcc-eEEE--------------------CCCCccEEEECCCCCCCEEE
Confidence 345578899999865432 346777643221110 0000 01222468999999999999
Q ss_pred EEEee
Q 046241 302 YRYGS 306 (638)
Q Consensus 302 Yrvg~ 306 (638)
-+|..
T Consensus 74 V~v~a 78 (95)
T 2h41_A 74 VNVYQ 78 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98865
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=84.74 E-value=8.6 Score=37.41 Aligned_cols=66 Identities=15% Similarity=0.255 Sum_probs=39.7
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCCcEEEE---cCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQY---GDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~~~V~y---g~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
|.+|.-.+..-. +.+++.++|.........-.| ..++. ..+- +... .+.
T Consensus 151 p~Pp~NL~At~V--T~tSVtLsW~aP~~~~GI~gY~ly~~g~~----v~~v-------------~~~~---------tsy 202 (238)
T 2w1n_A 151 VNPVRDFKASEI--NKKNVTVTWTEPETTEGLEGYILYKDGKK----VAEI-------------GKDE---------TSY 202 (238)
T ss_dssp CCCCEEEEEEEE--CSSCEEEEEECCSCCTTEEEEEEEETTEE----EEEE-------------ETTC---------CEE
T ss_pred cCCCCceEEEEc--cCCeEEEEecCCCCCCCceeEEEEeCCce----eEEe-------------eccc---------eEE
Confidence 445655555543 468999999987765443333 32211 1110 1110 134
Q ss_pred EEcCCCCCcEEEEEEee
Q 046241 290 VMTGLRPSATFSYRYGS 306 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~ 306 (638)
+++||+|+|.|.|||..
T Consensus 203 t~~gLk~~TeYsF~V~A 219 (238)
T 2w1n_A 203 TFKKLNRHTIYNFKIAA 219 (238)
T ss_dssp EECSCCTTCEEEEEEEE
T ss_pred EecCCCCCCEEEEEEEE
Confidence 78999999999999975
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=84.43 E-value=2.3 Score=46.00 Aligned_cols=80 Identities=11% Similarity=0.088 Sum_probs=54.3
Q ss_pred ccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCC-CccEEEEeCCcccCCCc----------------HHHH
Q 046241 327 EVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNG-SVDSIFHIGDISYATGF----------------LVEW 389 (638)
Q Consensus 327 ~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfvl~~GDi~y~~g~----------------~~~w 389 (638)
.++++++.+.......+- ..+-+..+++.+.+. +||.+|++|.+++.... ..-+
T Consensus 146 ~~l~ivvAsGPyT~sdnl---------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~ 216 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNF---------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTL 216 (460)
T ss_dssp SCEEEEEEESCCSCSSCC---------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSH
T ss_pred CCcEEEEEeCCccCCCcc---------ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCH
Confidence 459999999977654321 235677888887765 89999999999976521 1223
Q ss_pred HHHH-Hhh----hhhccCcceEEecCCCccC
Q 046241 390 DFFL-HQI----SPVASRVSYMTAIGNHERD 415 (638)
Q Consensus 390 d~f~-~~l----~~l~~~vP~~~v~GNHD~~ 415 (638)
++++ +.+ +.+...+-++.+||+||..
T Consensus 217 ~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 217 DELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 3333 333 3344567799999999974
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=84.12 E-value=12 Score=34.59 Aligned_cols=34 Identities=3% Similarity=-0.081 Sum_probs=23.8
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC-C---C-cceeeEEECC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL-V---G-WSDKIQFKTP 320 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~-~---~-~S~~~sF~T~ 320 (638)
....|+||+|+|.|.+||..-+ . . +|+.-.++|.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 164 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 3568899999999999997532 1 2 2455566664
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=83.98 E-value=1.1 Score=38.29 Aligned_cols=36 Identities=19% Similarity=0.246 Sum_probs=28.2
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
..+.|+||+|+|.|.+||..-+ ..+|+...|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 3678999999999999997521 14677888999754
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=83.93 E-value=7 Score=41.17 Aligned_cols=101 Identities=19% Similarity=0.270 Sum_probs=56.1
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCCC-----------cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCc
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----------QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGW 280 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----------~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~ 280 (638)
-|.+|..+.+...+ +.+.|+|....... -.|+|...........+.. .
T Consensus 108 ~p~pP~~l~v~~~~---~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~~~w~~~~~~~-------------~----- 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILL-------------S----- 166 (419)
T ss_dssp CCCCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEE-------------E-----
T ss_pred cCCCCCceEEEecC---CeEEEEECCCccccccchhccCceEEEEEEccCCCChhheeeec-------------c-----
Confidence 46778888777643 48999999865431 2455553321111111100 0
Q ss_pred cCCceEEEEEEcCCCCCcEEEEEEeeCC-------C---CcceeeEEECCCCCCCCccEEEEEEec
Q 046241 281 HDPGYIHTAVMTGLRPSATFSYRYGSDL-------V---GWSDKIQFKTPPAGGSSEVLRFLTYGD 336 (638)
Q Consensus 281 ~~~g~~h~a~l~gL~P~T~Y~Yrvg~~~-------~---~~S~~~sF~T~p~~~~~~~~rf~v~GD 336 (638)
....+...+.+|.|+++|..||.... + .||+...|+|++.. ...+..+-.+.+
T Consensus 167 --~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~ 229 (419)
T 2gys_A 167 --NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFFD 229 (419)
T ss_dssp --SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEEC
T ss_pred --cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEEC
Confidence 01122223339999999999997531 1 36788999998765 223344444433
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=83.62 E-value=2.6 Score=45.20 Aligned_cols=70 Identities=20% Similarity=0.354 Sum_probs=43.4
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCcc-ceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSET-SKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~-~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
.|..+|+.-.. .++++|+|....+. .-.|+|....... ....+. + +--.+++
T Consensus 372 ~~~~l~~~~~~--~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~~~-------------~---------~~~~~~~ 427 (461)
T 3csg_A 372 VPTNLEVVAAT--PTSLLISWDASYSSSVSYYRITYGETGGNSPVQEFTV-------------P---------GSKSTAT 427 (461)
T ss_dssp SSCCCEEEEEC--SSCEEEECCCTTGGGCSEEEEEEEETTCCSCCEEEEE-------------E---------TTCCEEE
T ss_pred CCcceEEeccC--CCeEEEEecCCCCCcceEEEEEEEECCCCccceEEEe-------------c---------CCCceEE
Confidence 57777777654 57899999876221 2357775532111 011110 1 1114789
Q ss_pred EcCCCCCcEEEEEEeeCC
Q 046241 291 MTGLRPSATFSYRYGSDL 308 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~~ 308 (638)
|+||+|||+|..+|..-.
T Consensus 428 i~~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 428 ISGLSPGVDYTITVYAYS 445 (461)
T ss_dssp ECSCCTTCEEEEEEEEEC
T ss_pred ecCCCCCCEEEEEEEEEe
Confidence 999999999999998643
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.22 E-value=5 Score=37.92 Aligned_cols=74 Identities=11% Similarity=0.131 Sum_probs=40.1
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
.|..|.-+++.... ..+++.|+|...... .-.|+|....... .+..-. +. ..-..
T Consensus 109 kp~pP~~l~v~~~~-~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~----~w~~~~---------~~-------~~~~~ 167 (206)
T 3v6o_A 109 KPLPPSSVKAEITI-NIGLLKISWEKPVFPENNLQFQIRYGLSGKEV----QWKMYE---------VY-------DAKSK 167 (206)
T ss_dssp CCCCCCSCEEEEET-TTTEEEEEC--------CEEEEEEEEESSSSC----CCEEEE---------EC-------C---C
T ss_pred cCCCCCceEeEEec-CCCeEEEEECCCCCCCCcEEEEEEEEECCCCC----ceEEEe---------cc-------cCcce
Confidence 56778777776653 367999999875432 2356665432110 011000 00 00113
Q ss_pred EEEEcCCCCCcEEEEEEee
Q 046241 288 TAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~ 306 (638)
.+.|.+|+|+|+|..||..
T Consensus 168 ~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 168 SVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp EEEECCSCTTSCEEEEEEE
T ss_pred eEEeecCCCCCEEEEEEEE
Confidence 5789999999999999975
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=81.16 E-value=3.1 Score=38.82 Aligned_cols=22 Identities=32% Similarity=0.471 Sum_probs=19.0
Q ss_pred eEEEEEEcCCCCCcEEEEEEee
Q 046241 285 YIHTAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~ 306 (638)
-.....+++|+|+|.|.|||..
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A 89 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILA 89 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEE
Confidence 4467789999999999999975
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 638 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 1e-46 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 3e-24 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 1e-23 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 5e-23 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 2e-07 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 2e-04 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.001 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 165 bits (417), Expect = 1e-46
Identities = 77/327 (23%), Positives = 125/327 (38%), Gaps = 41/327 (12%)
Query: 324 GSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT 383
G F GD+G++ + ++ ++ +GD+SYA
Sbjct: 3 GLDVPYTFGLIGDLGQSF----------DSNTTLSHYELSPKK---GQTVLFVGDLSYAD 49
Query: 384 GFL----VEWDFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYET 439
+ V WD + + ++ GNHE ++ E +
Sbjct: 50 RYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEIN--------ETEPFKPFSY 101
Query: 440 YFPMP---IPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWL 496
+ +P + WYSI++A H V+S+ + + QY W+KK++ V RS+TPWL
Sbjct: 102 RYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 161
Query: 497 IFSGHRPMYSSLSSSV--DNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAM 554
I H P+Y+S + E + KVD+ GHVH YER+ V +
Sbjct: 162 IVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAY--- 218
Query: 555 PTKDANGIDTYDHSNYSAPVQAVIGMAGFT--LDKFPDNADHTWSLIRISKFGYLRGNA- 611
K NG+ T + SAPV IG AG +D +S R + FG+ +
Sbjct: 219 --KITNGLCTP-VKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIK 275
Query: 612 NKEEMKFEFVNSDTREV--EDSFRIIK 636
N+ F + + DS
Sbjct: 276 NRTHAHFSWNRNQDGVAVEADSVWFFN 302
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 101 bits (251), Expect = 3e-24
Identities = 61/329 (18%), Positives = 99/329 (30%), Gaps = 54/329 (16%)
Query: 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVE 388
LRF+ GD G P + ++ KA+A V D I +GD Y TG
Sbjct: 5 LRFVAVGDWGGVPNA----PFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 60
Query: 389 WD------FFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFP 442
D F P V + GNH+ S+ Y Y
Sbjct: 61 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYR-LR 119
Query: 443 MPIPARDKPWYSIEQAGVHFTVMS---------TEHDWSENSEQYEWMKKDMASVDRSKT 493
IP + V S + + Q W+KK +A+
Sbjct: 120 FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---E 176
Query: 494 PWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLA 553
+++ +GH P++S + V + PLL +KV L GH HN +
Sbjct: 177 DYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ--------- 227
Query: 554 MPTKDANGIDTYDHSNYSAPVQAVIGMAGF------TLDKFPDNADHTWSLIRISKFGYL 607
+ + + G F L K P+ S G+
Sbjct: 228 ---------------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFA 272
Query: 608 RGNANKEEMKFEFVNSDTREVEDSFRIIK 636
+EM ++ + + ++ +
Sbjct: 273 YVEITPKEMSVTYIEAS-GKSLFKTKLPR 300
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 93.9 bits (233), Expect = 1e-23
Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 18/117 (15%)
Query: 210 FANPK---SPLYGHLSSSDSTATSMRVTWVSGDKEPQ--QVQYGDGKSETSKVTTFTQDD 264
FA P +P H++ D + ++W + + +V Y S++ K T
Sbjct: 16 FAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGT--- 72
Query: 265 MCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPP 321
+ + +IH + L + YR G + F TPP
Sbjct: 73 --------VVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFG--DAKRQFWFVTPP 119
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 92.3 bits (229), Expect = 5e-23
Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 17/116 (14%)
Query: 210 FANPKS---PLYGHLSSSDSTATSMRVTWVSGDK-EPQQVQYGDGKSETSKVTTFTQDDM 265
F P P H++ D +M ++WV+ D+ V+Y K+ ++
Sbjct: 10 FRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGK---- 65
Query: 266 CNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPP 321
F + G+IH + L+ + + Y G + + F TPP
Sbjct: 66 -------MSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLR--NTTRRFSFITPP 112
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 49.7 bits (117), Expect = 2e-07
Identities = 22/186 (11%), Positives = 45/186 (24%), Gaps = 11/186 (5%)
Query: 353 GSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIGNH 412
G L ++ + D+I IG++ ++ F +S +Y+ G
Sbjct: 16 GDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYV--PGPQ 73
Query: 413 ERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWS 472
+ E P+ G E +
Sbjct: 74 DAPIWEYLREAA-----NVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEA 128
Query: 473 ENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLA 532
+ + A + P + P + L + + V L+ + L
Sbjct: 129 LRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGL----NEQGSHEVAHLIKTHNPLLV 184
Query: 533 LFGHVH 538
L
Sbjct: 185 LVAGKG 190
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 19/126 (15%), Positives = 38/126 (30%), Gaps = 4/126 (3%)
Query: 418 GSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQ 477
SV + + ++ +D + V + + +Q
Sbjct: 147 AYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVK---FNGGFSEQQ 203
Query: 478 YEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN-KVDLALFGH 536
+W+ + D + LIFS + +AV +L + V + GH
Sbjct: 204 LQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGH 263
Query: 537 VHNYER 542
H+ R
Sbjct: 264 DHDGGR 269
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 38.9 bits (89), Expect = 0.001
Identities = 23/216 (10%), Positives = 55/216 (25%), Gaps = 39/216 (18%)
Query: 353 GSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEW----------------------- 389
++ + + D + +G+I E+
Sbjct: 13 ERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYII 72
Query: 390 ---DFFLHQISPVASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP 446
D F +I + + + G ++ + YE+ + V +E +
Sbjct: 73 ETLDKFFREIGELGVKTFVV--PGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAG---- 126
Query: 447 ARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYS 506
+ I G+ E + Y + + + L+ + P
Sbjct: 127 -WRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPR--RLVTIFYTPPIG 183
Query: 507 SLSSSVDNKFV----DAVEPLLLDNKVDLALFGHVH 538
V ++ ++A+ GHV
Sbjct: 184 EFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 638 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.89 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.86 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.85 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.81 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.77 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.68 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.63 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.29 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.25 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.08 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.03 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.95 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.86 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.51 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.5 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.37 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.98 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.88 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.22 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.15 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 96.92 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 96.9 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 96.85 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 96.83 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.82 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.75 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.7 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.59 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.55 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.45 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.37 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 96.32 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.29 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.28 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.27 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.26 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.25 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.23 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.09 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.08 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.07 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.0 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 95.97 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 95.93 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 95.9 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 95.89 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.89 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 95.74 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 95.7 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.69 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 95.65 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 95.58 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 95.46 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 95.44 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 95.42 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.42 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.38 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.34 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.17 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.13 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.03 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 94.92 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.91 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 94.9 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 94.88 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 94.86 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 94.84 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 94.8 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.77 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 94.73 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.71 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 94.69 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 94.55 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 94.5 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 94.49 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 94.49 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.23 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 94.2 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 94.17 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.17 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 94.15 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.14 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 94.14 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 94.06 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 94.0 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 93.94 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 93.93 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 93.89 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 93.8 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 93.71 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 93.5 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 93.4 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 93.36 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 92.46 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 91.92 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 91.91 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 91.2 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 91.03 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 89.95 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 89.8 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 88.15 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 88.0 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 85.02 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 84.06 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 81.46 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 80.18 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=2.1e-51 Score=430.06 Aligned_cols=286 Identities=27% Similarity=0.435 Sum_probs=232.0
Q ss_pred CCCccEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc----HHHHHHHHHhhhhh
Q 046241 324 GSSEVLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF----LVEWDFFLHQISPV 399 (638)
Q Consensus 324 ~~~~~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~----~~~wd~f~~~l~~l 399 (638)
|++.|+||+++||+|.... ...++..+ .+...+|||||++||++|+++. ..+||+|++.++++
T Consensus 3 g~~~p~~F~v~GD~g~~~~-----------~~~~~~~~--~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~ 69 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFD-----------SNTTLSHY--ELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS 69 (312)
T ss_dssp CSSCCEEEEEECSCCSBHH-----------HHHHHHHH--HHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeeCCCCCc-----------hHHHHHHH--HHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHH
Confidence 4456899999999985321 12222222 2355789999999999987653 46899999999999
Q ss_pred ccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCC---CCCCeEEEEECCEEEEEEeCCCCCCCcHH
Q 046241 400 ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPA---RDKPWYSIEQAGVHFTVMSTEHDWSENSE 476 (638)
Q Consensus 400 ~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~---~~~~yYsfd~G~v~fi~LDT~~~~~~~~~ 476 (638)
.+.+|+|+++||||+++.. .....+++..|..+|.||.++ ..+.||+|++|++|||+||++..+..+++
T Consensus 70 ~~~~P~~~~~GNHD~~~~~--------~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~ 141 (312)
T d2qfra2 70 VAYQPWIWTAGNHEIEFAP--------EINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTP 141 (312)
T ss_dssp HTTSCEEECCCGGGTCCBG--------GGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSH
T ss_pred hhcceEEEecccccccccc--------cccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHH
Confidence 9999999999999985432 111234567888999999764 34679999999999999999988888999
Q ss_pred HHHHHHHHhccccCCCCCeEEEEeccCCccCCCCC--CCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccC
Q 046241 477 QYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSS--VDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAM 554 (638)
Q Consensus 477 Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~--~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~ 554 (638)
|++||+++|++++|++++|+||++|+|+|++.... ....+|+.|++||.+++||++|+||+|.|||++|++++++...
T Consensus 142 Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~ 221 (312)
T d2qfra2 142 QYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 221 (312)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSS
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCccccc
Confidence 99999999999988899999999999999876433 3467899999999999999999999999999999999886421
Q ss_pred CccCCCCC-ccccCCCCCCCEEEEECCCCCc---cCCCCCCCCCCcceeeeccccEEEEEE-eCCEEEEEEEEcCCCcEE
Q 046241 555 PTKDANGI-DTYDHSNYSAPVQAVIGMAGFT---LDKFPDNADHTWSLIRISKFGYLRGNA-NKEEMKFEFVNSDTREVE 629 (638)
Q Consensus 555 ~~~d~~G~-~~y~~~~~~gpv~iv~G~aG~~---~~~~~~~~~~~ws~~~~~~~Gy~~v~v-~~~~L~~~~~~~~dG~v~ 629 (638)
+|. ..+ .++.||||||+|+||+. ...+..+ ++.|++++..+|||.+|++ +.++|.++++.+.||+++
T Consensus 222 -----~~~~~~~--~~~~g~vyiv~G~gG~~~~~~~~~~~~-~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~ 293 (312)
T d2qfra2 222 -----NGLCTPV--KDQSAPVYITIGDAGNYGVIDSNMIQP-QPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAV 293 (312)
T ss_dssp -----SCCCSCE--ECTTSCEEEEECCSCTTSCCCCCBCSS-CCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTC
T ss_pred -----CCccccc--cCCCcCEEEEECcCCCcccccccccCC-CCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEE
Confidence 111 112 25689999999999963 2233333 6889999999999999999 889999999999999987
Q ss_pred --EEEEEEecC
Q 046241 630 --DSFRIIKAK 638 (638)
Q Consensus 630 --D~f~I~k~~ 638 (638)
|+|+|.|..
T Consensus 294 ~~D~~~i~~~~ 304 (312)
T d2qfra2 294 EADSVWFFNRH 304 (312)
T ss_dssp CSEEEEEECTT
T ss_pred eeeEEEEEeCC
Confidence 999999973
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=5.4e-34 Score=291.83 Aligned_cols=262 Identities=21% Similarity=0.312 Sum_probs=187.5
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcH----HHHHHHHHhh--hhhccC
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFL----VEWDFFLHQI--SPVASR 402 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~----~~wd~f~~~l--~~l~~~ 402 (638)
+||+++||+|...... ..........++|.+.+++.+|||||++||++|..|.. .+|.++.+.+ .....+
T Consensus 5 ~~F~vigD~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (302)
T d1utea_ 5 LRFVAVGDWGGVPNAP----FHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRN 80 (302)
T ss_dssp EEEEEECSCCCCSSTT----SSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTT
T ss_pred eEEEEEecCCCCCCcc----cccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcC
Confidence 9999999998765432 11222344556777777888999999999999887643 3455444332 223468
Q ss_pred cceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEE------CCEEEEEEeCCC-------
Q 046241 403 VSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQ------AGVHFTVMSTEH------- 469 (638)
Q Consensus 403 vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~------G~v~fi~LDT~~------- 469 (638)
+|+++++||||+.... . ..+....+..++.+| ..||++.+ +.++|+++|+..
T Consensus 81 ~P~~~~~GNHD~~~~~-~---------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~ 145 (302)
T d1utea_ 81 VPWHVLAGNHDHLGNV-S---------AQIAYSKISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDD 145 (302)
T ss_dssp CCEEECCCHHHHHSCH-H---------HHHHGGGTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGG
T ss_pred CceEEeeccccccccc-c---------cccchhhccccccCC-----CcccceeecccCCCCcEEEEEccceeEeecccc
Confidence 9999999999974322 0 000011222334444 24677765 369999999741
Q ss_pred ----------CCCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccc
Q 046241 470 ----------DWSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHN 539 (638)
Q Consensus 470 ----------~~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~ 539 (638)
....+++|++||++.|++ .+.+|+|+++|||+++..........++.|++||++++|+++|+||+|.
T Consensus 146 ~~~~~~~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~~~~~~~~~~~~~ll~~~~v~~~~~GH~H~ 222 (302)
T d1utea_ 146 FVSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHN 222 (302)
T ss_dssp STTCSCCSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSS
T ss_pred cccccccccccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCCCCchhhhhhhhHHHHhcCceEEEeCCCcc
Confidence 011357899999999998 4678999999999999887778888999999999999999999999999
Q ss_pred cceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCCCCC-----CCCCcce-eeeccccEEEEEEeC
Q 046241 540 YERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDN-----ADHTWSL-IRISKFGYLRGNANK 613 (638)
Q Consensus 540 YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~-----~~~~ws~-~~~~~~Gy~~v~v~~ 613 (638)
|+|+.+ .+++.||++|+||......... ....|.. .....+||++++|++
T Consensus 223 ~~r~~~------------------------~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v~~ 278 (302)
T d1utea_ 223 LQYLQD------------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITP 278 (302)
T ss_dssp EEEEEC------------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECS
T ss_pred eEEEec------------------------CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEEEC
Confidence 999742 2357899999888753221110 0112221 223568999999999
Q ss_pred CEEEEEEEEcCCCcEEEEEEEEec
Q 046241 614 EEMKFEFVNSDTREVEDSFRIIKA 637 (638)
Q Consensus 614 ~~L~~~~~~~~dG~v~D~f~I~k~ 637 (638)
++|+++|++ .+|+++|+++|.+.
T Consensus 279 ~~l~~~~~~-~~G~~~~~~~~~~~ 301 (302)
T d1utea_ 279 KEMSVTYIE-ASGKSLFKTKLPRR 301 (302)
T ss_dssp SCEEEEEEE-TTSCEEEEEEECCC
T ss_pred CEEEEEEEe-CCCCEEEEEEecCC
Confidence 999999997 59999999999874
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.89 E-value=1.4e-22 Score=203.36 Aligned_cols=240 Identities=15% Similarity=0.161 Sum_probs=148.6
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh--CCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhc--cCcc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD--NGSVDSIFHIGDISYATGFLVEWDFFLHQISPVA--SRVS 404 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~--~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~--~~vP 404 (638)
|||++++|+|........ +..+.....++++++++. ..+|||||++||++. .|...+|+.+.+.++++. ..+|
T Consensus 5 ~~i~~iSD~Hl~~~~~~~--~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~-~g~~~~~~~~~~~l~~~~~~~~~p 81 (256)
T d2hy1a1 5 YVLLHISDTHLIGGDRRL--YGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQLGAE 81 (256)
T ss_dssp EEEEEECCCCBC------------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBS-SCCHHHHHHHHHHHHHHHHHHTCE
T ss_pred EEEEEEeeCccCCCCccc--ccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCChhHHHHHHHHhhhhhhhcCCC
Confidence 999999999986543211 111222345566666654 368999999999995 466778888888777654 3689
Q ss_pred eEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCC----CCcHHHHHH
Q 046241 405 YMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDW----SENSEQYEW 480 (638)
Q Consensus 405 ~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~----~~~~~Q~~W 480 (638)
+++++||||... .+.+.+..........+|+++.++++|++|||.... ....+|++|
T Consensus 82 ~~~v~GNHD~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~w 142 (256)
T d2hy1a1 82 LVWVMGNHDDRA-------------------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGW 142 (256)
T ss_dssp EEECCCTTSCHH-------------------HHHHHTTCCCCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHH
T ss_pred EEEEcccccchh-------------------hhhhhhccccccccccceEEEecccceeeeeeeecCCcCCcccHHHHHH
Confidence 999999999421 122222222222234578899999999999986532 346899999
Q ss_pred HHHHhccccCCCCCeEEEEeccCCccCCCC---CCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCcc
Q 046241 481 MKKDMASVDRSKTPWLIFSGHRPMYSSLSS---SVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTK 557 (638)
Q Consensus 481 L~~~La~~~r~~~~w~IV~~H~P~yss~~~---~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~ 557 (638)
|++.|++. +.+.+||++|+|++..... .......+.+..++++++|+++|+||.|...+.. +
T Consensus 143 l~~~L~~~---~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~--~---------- 207 (256)
T d2hy1a1 143 LAEELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--F---------- 207 (256)
T ss_dssp HHHHHTSC---CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEE--E----------
T ss_pred HHHHHHhh---hccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhceE--E----------
Confidence 99999873 3345788899999765421 1111225678899999999999999999765421 1
Q ss_pred CCCCCccccCCCCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEE
Q 046241 558 DANGIDTYDHSNYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFV 621 (638)
Q Consensus 558 d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~ 621 (638)
+|..+++.|+..... .... .+.-........||..|+++++.+.++.+
T Consensus 208 -------------~gi~~~~~~s~~~~~-~~~~--~~~~~~~~~~~~g~~lv~v~~d~~~~~~i 255 (256)
T d2hy1a1 208 -------------VGIPVSVASATCYTQ-DLTV--AAGGTRGRDGAQGCNLVHVYPDTVVHSVI 255 (256)
T ss_dssp -------------TTEEEEECCCCC----------------------CEEEEEECSSCEEEEEE
T ss_pred -------------CCEEEEEcCCccccc-cccC--CCCCcccccCCCCEEEEEEECCCEEEEeC
Confidence 122344444432211 1000 01111122345789999998888877664
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.86 E-value=8.7e-21 Score=192.26 Aligned_cols=192 Identities=12% Similarity=0.105 Sum_probs=131.1
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh--CCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD--NGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~--~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~ 406 (638)
++|+.++|+|........ +........++++++.++ ..+||+|+++||+++ .+...+|+.+.+.++++ .+|++
T Consensus 1 M~i~hiSD~Hl~~~~~~~--~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~-~~~~~~y~~~~~~l~~l--~~p~~ 75 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKL--YGFIDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPLY 75 (271)
T ss_dssp CEEEEECCCCBCSTTCCB--TTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCEE
T ss_pred CEEEEEecCcCCCCcccc--ccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCc-CCcchhHHHHHHHHhcc--CCCEE
Confidence 589999999986543211 111123345566666654 358999999999996 46677888888888776 68999
Q ss_pred EecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCC----CCcHHHHHHHH
Q 046241 407 TAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDW----SENSEQYEWMK 482 (638)
Q Consensus 407 ~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~----~~~~~Q~~WL~ 482 (638)
+++||||..... ...+...+...........|.++.++++|++||+.... ....+|++||+
T Consensus 76 ~i~GNHD~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~ 140 (271)
T d3d03a1 76 LIPGNHDDKALF---------------LEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLE 140 (271)
T ss_dssp EECCTTSCHHHH---------------HHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHH
T ss_pred EEecCccchHHH---------------HHHhhhhhhccccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHH
Confidence 999999963111 01111111111111233467888899999999997532 34789999999
Q ss_pred HHhccccCCCCCeEEEEeccCCccCCCCCCCH---HHHHHHHHHHHhC-CCeEEEEcccccccee
Q 046241 483 KDMASVDRSKTPWLIFSGHRPMYSSLSSSVDN---KFVDAVEPLLLDN-KVDLALFGHVHNYERT 543 (638)
Q Consensus 483 ~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~---~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt 543 (638)
++|++. ++ +++||++|||++.......+. ...++|.++|+++ +|+++|+||.|.....
T Consensus 141 ~~L~~~--~~-~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (271)
T d3d03a1 141 AQLFEG--GD-KPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (271)
T ss_dssp HHHHHH--TT-SCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred HHHhhh--cc-ceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhce
Confidence 999874 23 446788899987665433221 2246788899998 7999999999986654
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.85 E-value=1.8e-20 Score=189.27 Aligned_cols=249 Identities=15% Similarity=0.136 Sum_probs=154.3
Q ss_pred EEEEEEecCCCCCCCCCcc-----cccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCC-----CcHHHHHHHHHhhhh
Q 046241 329 LRFLTYGDMGKAPLDDSAE-----HYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYAT-----GFLVEWDFFLHQISP 398 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~-----~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~-----g~~~~wd~f~~~l~~ 398 (638)
|||++++|+|.+....... ......+...++++++.+++.+|||||++||+++.. .....|+.+.+.++.
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDA 83 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHT
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 9999999999864332110 001112356677777777889999999999999542 122345555555554
Q ss_pred hccCcceEEecCCCccCCCCCCCCc-ccCCCCCCc-cchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCC------
Q 046241 399 VASRVSYMTAIGNHERDYLGSSGSV-YESPDSGGE-CGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHD------ 470 (638)
Q Consensus 399 l~~~vP~~~v~GNHD~~~~~~sgs~-y~~~ds~ge-~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~------ 470 (638)
+ .+|++.++||||..... .... ......... ........+. ......+.+..++++|+.+++...
T Consensus 84 ~--~~p~~~v~GNHD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (320)
T d2nxfa1 84 C--SVDVHHVWGNHEFYNFS-RPSLLSSRLNSAQRTGTDTGSDLIG----DDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 156 (320)
T ss_dssp T--CSEEEECCCHHHHHHCC-HHHHHTSTTCCCC------CEECGG----GTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred c--CCCEEEecccCcccccc-chhcccccccchhhhcccccccccC----CCCccceeecCCCeEEEEecCccccccccc
Confidence 3 79999999999974221 0000 000000000 0000111111 112345677899999999987421
Q ss_pred ----------------------------------------CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCC
Q 046241 471 ----------------------------------------WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSS 510 (638)
Q Consensus 471 ----------------------------------------~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~ 510 (638)
...+.+|++||++.|+++.+ +..++|+++|+|++.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~~~~~~~ 235 (320)
T d2nxfa1 157 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPVHPCAAD 235 (320)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCCCTTSSC
T ss_pred ccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCCccCCCC
Confidence 01268999999999987653 3457899999999765533
Q ss_pred CC-CHHHHHHHHHHHHhC-CCeEEEEccccccceecccccCccccCCccCCCCCccccCCCCCCCEEEEECCCCCccCCC
Q 046241 511 SV-DNKFVDAVEPLLLDN-KVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSNYSAPVQAVIGMAGFTLDKF 588 (638)
Q Consensus 511 ~~-~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~~~~~ 588 (638)
.. .....+++..+|.++ +|+++|+||.|..++... ..|..||+.|+....
T Consensus 236 ~~~~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~------------------------~~g~~~i~~~~~~~~---- 287 (320)
T d2nxfa1 236 PICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD------------------------SSGAQHITLEGVIET---- 287 (320)
T ss_dssp GGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC------------------------TTSCEEEECCCGGGC----
T ss_pred CccchhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeec------------------------cCCCEEEECCeeecC----
Confidence 21 112356788899998 699999999998875421 123457776653211
Q ss_pred CCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEcC
Q 046241 589 PDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSD 624 (638)
Q Consensus 589 ~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~~ 624 (638)
. ....+|..+++.+++|.++-+.-.
T Consensus 288 ~-----------~~~~~~~~~~v~~d~~~~~~~~~~ 312 (320)
T d2nxfa1 288 P-----------PHSHAFATAYLYEDRMVMKGRGRV 312 (320)
T ss_dssp C-----------TTSCEEEEEEECSSEEEEEEEETS
T ss_pred C-----------CCCCCEEEEEEECCEEEEEEeccc
Confidence 1 123589999999999999987543
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.81 E-value=8.6e-20 Score=160.51 Aligned_cols=101 Identities=23% Similarity=0.431 Sum_probs=78.2
Q ss_pred cccCCC---CCCceEEEeecCCCCCceEEEEEeCCC-CCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCC
Q 046241 208 INFANP---KSPLYGHLSSSDSTATSMRVTWVSGDK-EPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDP 283 (638)
Q Consensus 208 ~~f~~~---~~P~~~~ls~~~~~~~sm~V~W~t~~~-~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~ 283 (638)
..|++| ++|+|+||++++++.++|+|+|+|.+. ..+.|+||+.+.......+ .. ......++.+.
T Consensus 8 ~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~--~~---------~~~~~~~~~~~ 76 (112)
T d2qfra1 8 DVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAK--GK---------MSTYRFFNYSS 76 (112)
T ss_dssp GGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEE--CE---------EECCBCSSCBC
T ss_pred ccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEE--EE---------EEEEEecccCC
Confidence 356665 679999999999888999999999765 5789999986554332211 10 01123345567
Q ss_pred ceEEEEEEcCCCCCcEEEEEEeeCCCCcceeeEEECCC
Q 046241 284 GYIHTAVMTGLRPSATFSYRYGSDLVGWSDKIQFKTPP 321 (638)
Q Consensus 284 g~~h~a~l~gL~P~T~Y~Yrvg~~~~~~S~~~sF~T~p 321 (638)
+++|+|+|+||+|||+|+||||++ +||++++|+|+|
T Consensus 77 ~~~h~v~Lt~L~P~T~Y~YrVG~~--~~S~~~~F~T~P 112 (112)
T d2qfra1 77 GFIHHTTIRKLKYNTKYYYEVGLR--NTTRRFSFITPP 112 (112)
T ss_dssp CEEEEEEECSCCTTCEEEEEECCS--SSCEEEEEECCC
T ss_pred cEEEEEEECCCCCCCEEEEEECCC--CceeeEEEEcCC
Confidence 899999999999999999999975 699999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.77 E-value=9e-19 Score=155.59 Aligned_cols=96 Identities=20% Similarity=0.314 Sum_probs=72.6
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCC--CCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDK--EPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~--~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
.++|+|+||++++++.++|+|+|+|... ..+.|+||..........+.+.. .....+...+|+|+|+
T Consensus 22 ~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~-----------~~~~~~~~~~~~H~v~ 90 (119)
T d1xzwa1 22 YNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVV-----------TYKYYNYTSAFIHHCT 90 (119)
T ss_dssp TTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEE-----------CCEETTEECCEEEEEE
T ss_pred CCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEE-----------EeecccccCCeEEEEE
Confidence 4789999999999888999999999543 46799999765443322111000 0011223468999999
Q ss_pred EcCCCCCcEEEEEEeeCCCCcceeeEEECCC
Q 046241 291 MTGLRPSATFSYRYGSDLVGWSDKIQFKTPP 321 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~~~~~S~~~sF~T~p 321 (638)
|+||+|||+|+||||++ +||++++|+|+|
T Consensus 91 LtgL~P~T~Y~YrVG~~--~~S~~~~F~T~P 119 (119)
T d1xzwa1 91 IKDLEYDTKYYYRLGFG--DAKRQFWFVTPP 119 (119)
T ss_dssp ECCCCTTCEEEEEECCG--GGCEEEEEECCC
T ss_pred ECCCCCCCEEEEEECCC--CccceEEEeCCC
Confidence 99999999999999986 599999999987
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.68 E-value=1.4e-16 Score=154.38 Aligned_cols=177 Identities=13% Similarity=0.046 Sum_probs=118.5
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
-+|+++||+|. ..+.++++++.+.+.++|+|+++||++.......++..+.+.+..+ .+|++++
T Consensus 6 ~~i~~~sd~hg--------------~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~i 69 (228)
T d1uf3a_ 6 RYILATSNPMG--------------DLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYV 69 (228)
T ss_dssp CEEEEEECCTT--------------CHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEE
T ss_pred cEEEEEeCCCC--------------CHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEEE
Confidence 57889999994 4678899998888889999999999997655566777777766654 6899999
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCC----------CCCcHHHH
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHD----------WSENSEQY 478 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~----------~~~~~~Q~ 478 (638)
+||||..... .. ...+......+........+.+..+++.++.++.... ......|.
T Consensus 70 ~GNHD~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (228)
T d1uf3a_ 70 PGPQDAPIWE---YL----------REAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVA 136 (228)
T ss_dssp CCTTSCSHHH---HH----------HHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHH
T ss_pred ecCCCchhhh---hh----------hhhcccccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHH
Confidence 9999963211 00 0000000000000001123456777888887765321 12367899
Q ss_pred HHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEcccccc
Q 046241 479 EWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNY 540 (638)
Q Consensus 479 ~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 540 (638)
+|+.+.++.. ...+.|+++|+|++........ .+.+..++++++++++++||+|..
T Consensus 137 ~~l~~~l~~~---~~~~~il~~H~p~~~~~~~~~~---~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 137 EYRLKALWEL---KDYPKIFLFHTMPYHKGLNEQG---SHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp HHHHGGGGGS---CSCCEEEEESSCBCBTTTBTTS---BHHHHHHHHHHCCSEEEECCSSCE
T ss_pred HHHHHHHhhc---cCCceEEEEeeeccCccccccc---cHHHHHHHHhcCCcEEEEcccccc
Confidence 9999999864 2334688899999765432222 245677788999999999999964
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.63 E-value=3.5e-16 Score=153.80 Aligned_cols=183 Identities=11% Similarity=0.070 Sum_probs=106.6
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHH---------------
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFF--------------- 392 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f--------------- 392 (638)
|.||++++|+|.. ...++++.+.+.+.+||+||++||+++......+|...
T Consensus 2 ~~ri~~isD~h~~--------------~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (257)
T d2yvta1 2 PRKVLAIKNFKER--------------FDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHEN 67 (257)
T ss_dssp CCEEEEEECCTTC--------------GGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred CcEEEEEeCCCCC--------------HHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccc
Confidence 4799999999953 23467777777778999999999999653222222211
Q ss_pred --------HHhhhhhc-cCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEE
Q 046241 393 --------LHQISPVA-SRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFT 463 (638)
Q Consensus 393 --------~~~l~~l~-~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi 463 (638)
...++.+. ..+|++.++||||..... .....+......+........+.+..+++.|+
T Consensus 68 ~n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (257)
T d2yvta1 68 EHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKI-------------FLRAAYEAETAYPNIRVLHEGFAGWRGEFEVI 134 (257)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHH-------------HHHHHHHTTTTCTTEEECSSEEEEETTTEEEE
T ss_pred cccchhhHHHHHHHHHhcCCcEEEEeCCCcchhhH-------------HHHHhccccccccccccccceeEEecCCeEEE
Confidence 11122222 368999999999953111 00011111111111000112234445677777
Q ss_pred EEeCCCC-------C--CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCC----CCHHHHHHHHHHHHhCCCe
Q 046241 464 VMSTEHD-------W--SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSS----VDNKFVDAVEPLLLDNKVD 530 (638)
Q Consensus 464 ~LDT~~~-------~--~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~----~~~~~r~~l~~Ll~k~~Vd 530 (638)
.++.... . .....+.+|++..++. .+....|+++|+|++...... ......+.+..++++++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~ 211 (257)
T d2yvta1 135 GFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPE 211 (257)
T ss_dssp EECSEEESSCCBSSSSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCS
T ss_pred EeccccCCccccchhhhhhhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCc
Confidence 7665321 1 1133444555555554 344568999999997644211 1112245788889999999
Q ss_pred EEEEcccccc
Q 046241 531 LALFGHVHNY 540 (638)
Q Consensus 531 lvlsGH~H~Y 540 (638)
++++||.|..
T Consensus 212 ~~~~GHiH~~ 221 (257)
T d2yvta1 212 VAIVGHVGKG 221 (257)
T ss_dssp EEEECSSCCE
T ss_pred EEEEEeecCC
Confidence 9999999964
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.29 E-value=2.2e-10 Score=108.26 Aligned_cols=181 Identities=13% Similarity=0.085 Sum_probs=112.8
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+|++++||+|....... ..+.+.+.++..++|.|+|+||++. . +..+.++.+ ..|++.+
T Consensus 1 MkI~viSD~H~~~~~~~-----------l~~~~~~~~~~~~~D~Ii~~GDi~~----~----e~l~~l~~~--~~~v~~V 59 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNS-----------LPAKFKKLLVPGKIQHILCTGNLCT----K----ESYDYLKTL--AGDVHIV 59 (182)
T ss_dssp CEEEEECCCCBTTTCSS-----------CCHHHHTTCCTTSCSEEEECSCCBS----H----HHHHHHHHH--CSEEEEC
T ss_pred CEEEEEeecCCCCcchh-----------hHHHHHHHhcccCCCEEEEccCccc----h----hhHHHHHhh--CCceEEE
Confidence 58999999997543210 1123444455578999999999983 1 223344443 3478999
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccc
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASV 488 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~ 488 (638)
.||||..... |. .-.++.++
T Consensus 60 ~GN~D~~~~~-------------------------p~------~~~~~~~g----------------------------- 79 (182)
T d1z2wa1 60 RGDFDENLNY-------------------------PE------QKVVTVGQ----------------------------- 79 (182)
T ss_dssp CCTTCCCTTS-------------------------CS------EEEEEETT-----------------------------
T ss_pred eCCcCccccc-------------------------ce------EEEEEEcC-----------------------------
Confidence 9999963211 11 11222222
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCC
Q 046241 489 DRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHS 568 (638)
Q Consensus 489 ~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~ 568 (638)
+.|.+.|...+... .. .+.+..++.+.++|++++||+|...-..
T Consensus 80 ------~~i~~~Hg~~~~~~---~~---~~~l~~~~~~~~~divi~GHTH~p~~~~------------------------ 123 (182)
T d1z2wa1 80 ------FKIGLIHGHQVIPW---GD---MASLALLQRQFDVDILISGHTHKFEAFE------------------------ 123 (182)
T ss_dssp ------EEEEEECSCCCCBT---TC---HHHHHHHHHHHSSSEEECCSSCCCEEEE------------------------
T ss_pred ------cEEEEEeCCCCCCC---CC---HHHHHHHHhccCCCEEEECCcCcceEEE------------------------
Confidence 24555665543221 11 2456667778899999999999865321
Q ss_pred CCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEcCCCcE-EEEEEEEec
Q 046241 569 NYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTREV-EDSFRIIKA 637 (638)
Q Consensus 569 ~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~v-~D~f~I~k~ 637 (638)
.++.++|--|+.|.+....... ....|+.++++++++++..+....++| +++++..|+
T Consensus 124 -~~~~~~iNPGSv~~pr~~~~~~----------~~~syaild~~~~~v~~~~~~l~~~~v~~~~~~~~~~ 182 (182)
T d1z2wa1 124 -HENKFYINPGSATGAYNALETN----------IIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182 (182)
T ss_dssp -ETTEEEEECCCTTCCCCSSCSC----------CCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECC
T ss_pred -ECCEEEEeCCCCCCCCCCCCCC----------CCCEEEEEEEeCCEEEEEEEEecCCcEEEEEEEEEcC
Confidence 1245667778877654322111 123699999999999999998767776 677887774
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.25 E-value=4.5e-10 Score=107.00 Aligned_cols=188 Identities=9% Similarity=0.072 Sum_probs=110.1
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEec
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAI 409 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 409 (638)
=++++||+|....... ...++.+.++..++|.|+|+||++.. ...+.++.+ ..+++.+.
T Consensus 5 lIlviSD~H~~~~~~~-----------l~~~~~~~~~~~~vD~ii~~GDi~~~--------~~l~~l~~l--~~~v~~V~ 63 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKE-----------LPSNFRELLATDKINYVLCTGNVCSQ--------EYVEMLKNI--TKNVYIVS 63 (193)
T ss_dssp EEEEECCCCTTTTCSS-----------CCGGGHHHHHCTTCCEEEECSCCCCH--------HHHHHHHHH--CSCEEECC
T ss_pred EEEEEeCCCCCcccch-----------hhHHHHHHhccCCCCEEEECCCCCCH--------HHHHHHHhh--CCCEEEEc
Confidence 3899999996432211 01123333456789999999999831 223344443 24688999
Q ss_pred CCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhcccc
Q 046241 410 GNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASVD 489 (638)
Q Consensus 410 GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~~ 489 (638)
||||..... . ...+... .| ..-.+.+++.
T Consensus 64 GN~D~~~~~-~-------------~~~~~~~--lp------~~~~~~~~~~----------------------------- 92 (193)
T d2a22a1 64 GDLDSAIFN-P-------------DPESNGV--FP------EYVVVQIGEF----------------------------- 92 (193)
T ss_dssp CTTCCSCCB-C-------------CGGGTBC--CC------SEEEEEETTE-----------------------------
T ss_pred CCCCcchhh-h-------------hHHHHhh--CC------ccEEEEECCE-----------------------------
Confidence 999974322 0 0111111 12 1233444444
Q ss_pred CCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCCC
Q 046241 490 RSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHSN 569 (638)
Q Consensus 490 r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~ 569 (638)
.|.+.|...+.. ..+ .+.+..++.+.++|++++||+|......
T Consensus 93 ------~i~l~H~~~~~~---~~~---~~~l~~~~~~~~~dvvi~GHTH~~~~~~------------------------- 135 (193)
T d2a22a1 93 ------KIGLMHGNQVLP---WDD---PGSLEQWQRRLDCDILVTGHTHKLRVFE------------------------- 135 (193)
T ss_dssp ------EEEEECSTTSSS---TTC---HHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------------
T ss_pred ------EEEEEeccCCCC---CCC---HHHHHHHHhhcCCCEEEEcCccCceEEE-------------------------
Confidence 344455432211 112 2456777888899999999999965321
Q ss_pred CCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEcCCCcE-EEEEEEEe
Q 046241 570 YSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTREV-EDSFRIIK 636 (638)
Q Consensus 570 ~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~v-~D~f~I~k 636 (638)
.++.+.|--|+.|.+...... .....|+.++++++++++++|+..+|++ ++..+..|
T Consensus 136 ~~g~~~iNPGSvg~pr~~~~~----------~~~~syaild~~~~~v~v~~y~l~~~~~~~~~~~~~~ 193 (193)
T d2a22a1 136 KNGKLFLNPGTATGAFSALTP----------DAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFSK 193 (193)
T ss_dssp ETTEEEEECCCSSCCCCTTST----------TCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred ECCEEEEECCCCCcCcCCCCC----------CCCCEEEEEEEECCEEEEEEEEecCCeEEEEEEEEeC
Confidence 023456666888765322111 1123799999999999999998877765 45445443
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.08 E-value=5.3e-09 Score=97.70 Aligned_cols=161 Identities=16% Similarity=0.171 Sum_probs=104.6
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
.||+++||+|.. ...++++++.. ..++|.|+|+||+.+..... ...++.++
T Consensus 4 ~kI~viSD~Hgn--------------~~al~~vl~~~-~~~~D~iih~GD~~~~~~~~--------------~~~~~~~V 54 (173)
T d3ck2a1 4 QTIIVMSDSHGD--------------SLIVEEVRDRY-VGKVDAVFHNGDSELRPDSP--------------LWEGIRVV 54 (173)
T ss_dssp EEEEEECCCTTC--------------HHHHHHHHHHH-TTTSSEEEECSCCCSCTTCG--------------GGTTEEEC
T ss_pred CEEEEEeccCCC--------------HHHHHHHHHHh-hcCCCEEEECCcccCcccch--------------hhcCCeEE
Confidence 899999999942 34566666544 35799999999998643211 12467899
Q ss_pred cCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCCCCCCCcHHHHHHHHHHhccc
Q 046241 409 IGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTEHDWSENSEQYEWMKKDMASV 488 (638)
Q Consensus 409 ~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~~~~~~~~~Q~~WL~~~La~~ 488 (638)
.||||..... | ....+++++.
T Consensus 55 ~GN~D~~~~~-------------------------~------~~~~~~~~~~---------------------------- 75 (173)
T d3ck2a1 55 KGNMDFYAGY-------------------------P------ERLVTELGST---------------------------- 75 (173)
T ss_dssp CCTTCCSTTC-------------------------C------SEEEEEETTE----------------------------
T ss_pred ecCccccccc-------------------------c------eEEEEEECCE----------------------------
Confidence 9999963211 1 0112333332
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccceecccccCccccCCccCCCCCccccCC
Q 046241 489 DRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYERTCSVYKQSCLAMPTKDANGIDTYDHS 568 (638)
Q Consensus 489 ~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~ 568 (638)
.|++.|..++..... .+.+..++.+.++|++++||+|......
T Consensus 76 -------~~~~~Hg~~~~~~~~------~~~l~~~~~~~~~dvvi~GHTH~p~~~~------------------------ 118 (173)
T d3ck2a1 76 -------KIIQTHGHLFDINFN------FQKLDYWAQEEEAAICLYGHLHVPSAWL------------------------ 118 (173)
T ss_dssp -------EEEEECSGGGTTTTC------SHHHHHHHHHTTCSEEECCSSCCEEEEE------------------------
T ss_pred -------EEEEEeCcCCCCCCC------HHHHHHHHHhcCCCEEEeCCcCcceEEE------------------------
Confidence 455556554432211 1356667778899999999999865421
Q ss_pred CCCCCEEEEECCCCCccCCCCCCCCCCcceeeeccccEEEEEEeCCEEEEEEEEcCCCcEE
Q 046241 569 NYSAPVQAVIGMAGFTLDKFPDNADHTWSLIRISKFGYLRGNANKEEMKFEFVNSDTREVE 629 (638)
Q Consensus 569 ~~~gpv~iv~G~aG~~~~~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~~~~~~~dG~v~ 629 (638)
.++.++|--|+.|.+.+..+ ...|+.++++++.++++++.. +++++
T Consensus 119 -~~~~~~iNPGSvg~pr~~~~-------------~~syail~~~~~~~~v~~~~~-d~~~~ 164 (173)
T d3ck2a1 119 -EGKILFLNPGSISQPRGTIR-------------ECLYARVEIDDSYFKVDFLTR-DHEVY 164 (173)
T ss_dssp -ETTEEEEEECCSSSCCTTCC-------------SCCEEEEEECSSEEEEEEECT-TSCBC
T ss_pred -ECCEEEEECCCCCCCCCCCC-------------CCEEEEEEEeCCEEEEEEEEe-CCeEe
Confidence 12467888899887643322 225999999999999999864 66544
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.03 E-value=3.6e-10 Score=110.15 Aligned_cols=69 Identities=9% Similarity=0.195 Sum_probs=46.5
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhh-----CCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVD-----NGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRV 403 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~v 403 (638)
++|+++||+|.. ...++++++.++ ..++|.|+++||+++.+... .+..+.+..+..+.
T Consensus 1 v~I~visDiHg~--------------~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~~---~evi~~l~~l~~~~ 63 (251)
T d1nnwa_ 1 VYVAVLANIAGN--------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP---KEVIEVIKDLTKKE 63 (251)
T ss_dssp CEEEEEECCTTC--------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH---HHHHHHHHHHHHHS
T ss_pred CEEEEEEccccC--------------HHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCCc---HHHHHHHHHHhhcC
Confidence 479999999932 344555555442 25679999999999643222 23445555554456
Q ss_pred ceEEecCCCcc
Q 046241 404 SYMTAIGNHER 414 (638)
Q Consensus 404 P~~~v~GNHD~ 414 (638)
++++++||||.
T Consensus 64 ~v~~v~GNHD~ 74 (251)
T d1nnwa_ 64 NVKIIRGKYDQ 74 (251)
T ss_dssp CEEEECCHHHH
T ss_pred CEEEEeccHHH
Confidence 88999999995
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.95 E-value=3e-09 Score=98.37 Aligned_cols=63 Identities=14% Similarity=0.331 Sum_probs=47.0
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
+|++++||+|. +...++++++.+++.++|.|+++||++.. .. .+.+.. ...|++.+
T Consensus 1 MkI~iiSDiHg--------------n~~al~~vl~~~~~~~~D~ii~~GD~~~~----~~----~~~l~~--~~~~~~~v 56 (165)
T d1s3la_ 1 MKIGIMSDTHD--------------HLPNIRKAIEIFNDENVETVIHCGDFVSL----FV----IKEFEN--LNANIIAT 56 (165)
T ss_dssp CEEEEECCCTT--------------CHHHHHHHHHHHHHSCCSEEEECSCCCST----HH----HHHGGG--CSSEEEEE
T ss_pred CEEEEEEeCCC--------------CHHHHHHHHHHHHhcCCCEEEECCCccCH----HH----HHHHhh--cCccEEEE
Confidence 58999999994 24567777777778899999999999842 11 122222 25789999
Q ss_pred cCCCccC
Q 046241 409 IGNHERD 415 (638)
Q Consensus 409 ~GNHD~~ 415 (638)
.||||.+
T Consensus 57 ~GN~D~~ 63 (165)
T d1s3la_ 57 YGNNDGE 63 (165)
T ss_dssp CCTTCCC
T ss_pred ccccccc
Confidence 9999964
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.86 E-value=1.2e-09 Score=110.46 Aligned_cols=86 Identities=14% Similarity=0.101 Sum_probs=57.9
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCC-cHHHHHHHHHhhhhhc-cCcceE
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATG-FLVEWDFFLHQISPVA-SRVSYM 406 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g-~~~~wd~f~~~l~~l~-~~vP~~ 406 (638)
+||++++|+|.+....... .........++++++.+.+.++|+||++||+++... .......+.+.++.+. ..+|++
T Consensus 1 Mkilh~SDlHlG~~~~~~~-~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~ 79 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKP-QREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCH-HHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEecCcCCCCCcCch-hHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEE
Confidence 6899999999865321100 000112456777777777899999999999986432 2333445555555554 469999
Q ss_pred EecCCCccC
Q 046241 407 TAIGNHERD 415 (638)
Q Consensus 407 ~v~GNHD~~ 415 (638)
+++||||..
T Consensus 80 ~i~GNHD~~ 88 (333)
T d1ii7a_ 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCCCccc
Confidence 999999974
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=1.9e-07 Score=96.01 Aligned_cols=191 Identities=15% Similarity=0.158 Sum_probs=96.7
Q ss_pred cEEEEEEecCCCCCCCCCcccccCCCh----HHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHHH---HHHHHHhhhhh
Q 046241 328 VLRFLTYGDMGKAPLDDSAEHYIQPGS----LSVIKAMADEVDNGSVD-SIFHIGDISYATGFLVE---WDFFLHQISPV 399 (638)
Q Consensus 328 ~~rf~v~GD~g~~~~~~~~~~~~~pg~----~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~~---wd~f~~~l~~l 399 (638)
.++|+.++|+|..-.... ...+. ...++++.+++++.+++ ++|.+||+.... .... .....+.|..+
T Consensus 8 ~ltILhtnD~Hg~l~~~~----~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs-~~s~~~~g~~~~~~mn~~ 82 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNE----YGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFRGMNLV 82 (337)
T ss_dssp EEEEEEECCCTTCCSCCT----TSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSC-HHHHTTTTHHHHHHHHHH
T ss_pred EEEEEEEeecccCCcCCC----CCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccC-HHHHHhCChHHHHHHHhc
Confidence 389999999996432210 11111 23345555555556666 556699998432 1222 12233333333
Q ss_pred ccCcceEEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCC-----------CCCCCeEEEEECCEEE--EEEe
Q 046241 400 ASRVSYMTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIP-----------ARDKPWYSIEQAGVHF--TVMS 466 (638)
Q Consensus 400 ~~~vP~~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~-----------~~~~~yYsfd~G~v~f--i~LD 466 (638)
. .- ..++||||+++.. +....+......|.- ..-..|.-++.+++++ |.+-
T Consensus 83 g--~D-a~~~GNHEfd~G~-------------~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~ 146 (337)
T d1usha2 83 G--YD-AMAIGNHEFDNPL-------------TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLT 146 (337)
T ss_dssp T--CC-EEECCGGGGSSCH-------------HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEE
T ss_pred C--Ce-EEEechhhhccch-------------HHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeeccc
Confidence 1 12 5678999996532 000111111111100 0123577788998655 6664
Q ss_pred CCCC-------C------CCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEE
Q 046241 467 TEHD-------W------SENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLAL 533 (638)
Q Consensus 467 T~~~-------~------~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~Vdlvl 533 (638)
+... . ....+..+...+.|++. .+...+|++.|.+................+...+...+||+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~~~~~la~~~~~~~vD~Iv 224 (337)
T d1usha2 147 TDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIV 224 (337)
T ss_dssp CTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEE
T ss_pred ccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccchhHHHHHhCcccCceEEe
Confidence 4321 0 11123333333445432 3567899999998764432211111122344444556899999
Q ss_pred Eccccccc
Q 046241 534 FGHVHNYE 541 (638)
Q Consensus 534 sGH~H~Ye 541 (638)
.||.|...
T Consensus 225 gGHsH~~~ 232 (337)
T d1usha2 225 GGHSQDPV 232 (337)
T ss_dssp CCSSCCBC
T ss_pred cCccCccc
Confidence 99999754
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.50 E-value=5.9e-07 Score=83.34 Aligned_cols=70 Identities=11% Similarity=0.144 Sum_probs=48.3
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc-----HHHHHHHHHhhhhhccCc
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF-----LVEWDFFLHQISPVASRV 403 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~-----~~~wd~f~~~l~~l~~~v 403 (638)
+|++++||+|. ....++++++.+++.++|.|+++||++..... ........+.++.+ ..
T Consensus 2 Mki~iiSDiHg--------------~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~--~~ 65 (184)
T d1su1a_ 2 MKLMFASDIHG--------------SLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--AH 65 (184)
T ss_dssp CEEEEECCCTT--------------BHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--GG
T ss_pred cEEEEEeecCC--------------CHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhc--CC
Confidence 69999999993 24567778777777799999999999853211 01112233333332 46
Q ss_pred ceEEecCCCcc
Q 046241 404 SYMTAIGNHER 414 (638)
Q Consensus 404 P~~~v~GNHD~ 414 (638)
+++.+.||||.
T Consensus 66 ~~~~v~GNhD~ 76 (184)
T d1su1a_ 66 KVIAVRGNCDS 76 (184)
T ss_dssp GEEECCCTTCC
T ss_pred cEEEecCCCCc
Confidence 89999999996
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.37 E-value=1.5e-06 Score=81.66 Aligned_cols=45 Identities=22% Similarity=0.346 Sum_probs=34.0
Q ss_pred EEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 496 LIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 496 ~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
.|++.|.|+...... ......+.+..+..+.+++++|+||+|...
T Consensus 108 ~i~l~H~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 108 RILLSHYPAKDPITE-RYPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEESSCSSCSSCC-SCHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEEeCCCcccccc-ccccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 688999998644332 223445677888999999999999999754
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.98 E-value=2.3e-05 Score=79.53 Aligned_cols=192 Identities=17% Similarity=0.185 Sum_probs=89.7
Q ss_pred EEEEEEecCCCCCCCCCccc-c-cCCC-hHHHHHHHHHHhhCCCcc-EEEEeCCcccCCCcHHHHHHHHHhhhhhccCcc
Q 046241 329 LRFLTYGDMGKAPLDDSAEH-Y-IQPG-SLSVIKAMADEVDNGSVD-SIFHIGDISYATGFLVEWDFFLHQISPVASRVS 404 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~-~-~~pg-~~~~~~~l~~~i~~~~pD-fvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP 404 (638)
++|+...|+|..-.....+. + ..-+ -......+.+..++.+++ +++.+||+............--+.+-+++..++
T Consensus 12 l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn~lg 91 (322)
T d3c9fa2 12 INFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQD 91 (322)
T ss_dssp EEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSC
T ss_pred EEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHHhccC
Confidence 99999999996432111110 0 0001 122333444444456677 555799999543211100000012223334556
Q ss_pred e-EEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCC----------CC----CCCCeEEEEEC--CEEEEEEeC
Q 046241 405 Y-MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPI----------PA----RDKPWYSIEQA--GVHFTVMST 467 (638)
Q Consensus 405 ~-~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~----------~~----~~~~yYsfd~G--~v~fi~LDT 467 (638)
+ ..++||||+++....-..+ ......+..|- .+ ....|..+..+ .+.++.+.+
T Consensus 92 yDa~t~GNHEfd~g~~~l~~~----------~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~ 161 (322)
T d3c9fa2 92 YDLLTIGNHELYLWENSKQEY----------ETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGF 161 (322)
T ss_dssp CSEECCCGGGSSSHHHHHHHH----------HHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEEC
T ss_pred CcEEeecceecccchHHHHHH----------HHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEee
Confidence 6 7789999996421000000 00001111110 00 12346666654 478888776
Q ss_pred CCCCCC---------c--HHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhC-CCe-EEEE
Q 046241 468 EHDWSE---------N--SEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN-KVD-LALF 534 (638)
Q Consensus 468 ~~~~~~---------~--~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~-~Vd-lvls 534 (638)
...... . ..+..|+++.++ .+..-+|+++|.++-... .........+-+.. +++ ++|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~-----~~~~~~~~~la~~~~~~~~~iig 232 (322)
T d3c9fa2 162 LFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW-----GEFYQVHQYLRQFFPDTIIQYFG 232 (322)
T ss_dssp CCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT-----CHHHHHHHHHHHHCTTSEEEEEE
T ss_pred ccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc-----cccchHHHHHHHhCCCCCEEEec
Confidence 533211 1 112234444443 456789999998863221 11112222222232 344 6899
Q ss_pred ccccc
Q 046241 535 GHVHN 539 (638)
Q Consensus 535 GH~H~ 539 (638)
||.|.
T Consensus 233 GHsH~ 237 (322)
T d3c9fa2 233 GHSHI 237 (322)
T ss_dssp CSSCC
T ss_pred ccccc
Confidence 99996
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.88 E-value=0.00012 Score=73.38 Aligned_cols=189 Identities=14% Similarity=0.074 Sum_probs=93.6
Q ss_pred EEEEEEecCCCCCCCCC---cccccCCChHHHHHHHHHHhhCCCc-cEEEEeCCcccCCCcHHHHH---HHHHhhhhhcc
Q 046241 329 LRFLTYGDMGKAPLDDS---AEHYIQPGSLSVIKAMADEVDNGSV-DSIFHIGDISYATGFLVEWD---FFLHQISPVAS 401 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~---~~~~~~pg~~~~~~~l~~~i~~~~p-Dfvl~~GDi~y~~g~~~~wd---~f~~~l~~l~~ 401 (638)
++|+..+|+|..-.... .......+....+..+++++++.++ -+++.+||++... ....+. ...+.+..+
T Consensus 3 l~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs-~~~~~~~g~~~~~~~n~~-- 79 (302)
T d2z1aa2 3 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGT-LYFNQYRGLADRYFMHRL-- 79 (302)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSS-HHHHHHTTHHHHHHHHHT--
T ss_pred EEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCC-HhHhhhcchhHHHHHHhc--
Confidence 78999999996432100 0001111335566667776655444 4677899998432 222221 122222222
Q ss_pred CcceEEecCCCccCCCCC------CCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEE--EEEeCCC----
Q 046241 402 RVSYMTAIGNHERDYLGS------SGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHF--TVMSTEH---- 469 (638)
Q Consensus 402 ~vP~~~v~GNHD~~~~~~------sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~f--i~LDT~~---- 469 (638)
-.=..++||||+++... ..+.+.--.+ ...+..--.. ...-..|...+.+++++ |.+-+..
T Consensus 80 -gyDa~~~GNHEfd~G~~~l~~~~~~~~~p~l~a----Ni~~~~~~~~--~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~ 152 (302)
T d2z1aa2 80 -RYRAMALGNHEFDLGPGPLADFLKGARFKVVSA----NVDASREPRL--KGLFAPYAVVVVGGERVGIIGLTTPDTREI 152 (302)
T ss_dssp -TCCEEECCGGGGTTCHHHHHHHHTTCCSEEECT----TEECTTCGGG--TTSCBSEEEEEETTEEEEEEEEECTTHHHH
T ss_pred -ccccccccchhhhcChhHHHHHhhhcccceeEe----eeeccccccc--cCccceeEEEEECCeEEEEEeccccccccc
Confidence 22367899999975320 0000000000 0000000000 00123467788898665 4444431
Q ss_pred -----C--CCCcHHHHHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhC-CCeEEEEccccccc
Q 046241 470 -----D--WSENSEQYEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDN-KVDLALFGHVHNYE 541 (638)
Q Consensus 470 -----~--~~~~~~Q~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~Ye 541 (638)
. +....+..++..+.|++ .+..-+|++.|.... .-..+.++. +||+++.||.|..-
T Consensus 153 ~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~-------------~d~~la~~~~giD~ii~gh~h~~~ 216 (302)
T d2z1aa2 153 SNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYG-------------EDLKLARRLVGVQVIVGGHSHTLL 216 (302)
T ss_dssp SCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH-------------HHHHHHTTCSSCCEEEECSSCCCB
T ss_pred ccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcc-------------hhhHHHhcCCCeeeeecCccceee
Confidence 0 11223344455555543 456679999998631 112344443 79999999999855
Q ss_pred ee
Q 046241 542 RT 543 (638)
Q Consensus 542 Rt 543 (638)
..
T Consensus 217 ~~ 218 (302)
T d2z1aa2 217 GS 218 (302)
T ss_dssp SC
T ss_pred cc
Confidence 43
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=0.001 Score=53.43 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=27.8
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~ 322 (638)
...++||+|+|+|.+||..-+ . .||+...|+|.|.
T Consensus 58 ~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~pd 96 (96)
T d1x5xa1 58 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 96 (96)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCcC
Confidence 467899999999999997632 2 3778889999873
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.15 E-value=0.00063 Score=55.51 Aligned_cols=83 Identities=18% Similarity=0.239 Sum_probs=52.0
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCC--CCc----EEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDK--EPQ----QVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~--~~~----~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
-|..|..+++.-.. .++|+|+|..... ... .|+|...... ..... ..
T Consensus 2 ~p~~p~~L~~~~~~--~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~----~~~~~-----------~~---------- 54 (94)
T d1x5aa1 2 ESLSGLSLKLVKKE--PRQLELTWAGSRPRNPGGNLSYELHVLNQDEE----WHQMV-----------LE---------- 54 (94)
T ss_dssp CCCCSCCCCEEEEE--TTEEEEECCCCCSSCCSSCCEEEEEEECSSCE----EEEEE-----------SS----------
T ss_pred cCCCCCceEEEEcC--CCEEEEEEecccCCCCCcEEEEEEEEecCCce----EEEee-----------cc----------
Confidence 35567777776654 5899999975432 122 3444432211 00000 00
Q ss_pred EEEEEEcCCCCCcEEEEEEeeC----CCCcceeeEEECCCC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSD----LVGWSDKIQFKTPPA 322 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~----~~~~S~~~sF~T~p~ 322 (638)
..++|+||+|+|.|.+||..- .+.||+...|+|.|.
T Consensus 55 -t~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~PP 94 (94)
T d1x5aa1 55 -PRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 94 (94)
T ss_dssp -SEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred -CEEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCCC
Confidence 246899999999999999763 235889999999863
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.92 E-value=0.0023 Score=52.13 Aligned_cols=87 Identities=11% Similarity=0.210 Sum_probs=53.9
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-------cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-------QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-------~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
+.+|..+++.... .+++.|+|....... -.|+|.............. ..+.
T Consensus 3 l~pP~~l~v~~~~--~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------------------~~~~ 60 (104)
T d2b5ib2 3 LMAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLT--------------------LKQK 60 (104)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEE--------------------ECSC
T ss_pred cCCCCCcEEEEEe--CCEEEEEEccccccccccceeEEEEEEecccccceeeeEEe--------------------cCCC
Confidence 4578888877764 579999998764421 2456654332211100000 0112
Q ss_pred EEEEEEcCCCCCcEEEEEEeeC---C-----CCcceeeEEECCC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSD---L-----VGWSDKIQFKTPP 321 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~---~-----~~~S~~~sF~T~p 321 (638)
-..+.|.||+|+|.|.+||... + ..||+...|+|.|
T Consensus 61 ~~~~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 61 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred cEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 2356889999999999999852 1 1467788999987
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.0015 Score=53.32 Aligned_cols=85 Identities=15% Similarity=0.328 Sum_probs=52.5
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
.|..|..+++.... .+++.|.|...... .-.|+|............. .+..
T Consensus 3 ~P~~p~~~~~~~~s--~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~----------------------~~~~ 58 (98)
T d1x5la1 3 APSQVVVIRQERAG--QTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTL----------------------KAVT 58 (98)
T ss_dssp CCCCCCCEECSCBC--SSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEE----------------------EESS
T ss_pred CCCCCCceEEEecc--CCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEEe----------------------cCCc
Confidence 35567666666554 68999999854332 1257775432211111110 0112
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTP 320 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~ 320 (638)
+..+|+||+|+++|.+||..-+ ..||+...|+|.
T Consensus 59 ~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 59 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 3668999999999999997522 257888999985
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.0021 Score=51.63 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=28.0
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
..+|+||+|++.|.+||..-+ ..||+...|+|+|.
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 55 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCCC
Confidence 457899999999999997532 25788889999863
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.002 Score=51.77 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=27.7
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p 321 (638)
.+.|.||+|+|.|.+||..-+ . .||+...|+|.|
T Consensus 57 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 57 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 578999999999999997532 2 467888999986
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.82 E-value=0.00055 Score=64.44 Aligned_cols=64 Identities=19% Similarity=0.209 Sum_probs=45.0
Q ss_pred EEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhC-CCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEe
Q 046241 330 RFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDN-GSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTA 408 (638)
Q Consensus 330 rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 408 (638)
|++++||+|. ....++++++.+.. ...|.++++||+++.+ .... +.++.+ .+.-+..+
T Consensus 14 rI~vIgDIHG--------------~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrG-p~s~--~vl~~l----~~~~~~~i 72 (219)
T d1g5ba_ 14 NIWVVGDLHG--------------CYTNLMNKLDTIGFDNKKDLLISVGDLVDRG-AENV--ECLELI----TFPWFRAV 72 (219)
T ss_dssp CEEEECCCTT--------------CHHHHHHHHHHHTCCTTTCEEEECSCCSSSS-SCHH--HHHGGG----GSTTEEEC
T ss_pred eEEEEEeccc--------------CHHHHHHHHHHcCCCCCCCEEEEeCCccccC-ccHH--HHHHHh----hccccccc
Confidence 6899999994 35667788887753 5668999999999654 3321 122222 34567889
Q ss_pred cCCCcc
Q 046241 409 IGNHER 414 (638)
Q Consensus 409 ~GNHD~ 414 (638)
.||||.
T Consensus 73 ~GNHE~ 78 (219)
T d1g5ba_ 73 RGNHEQ 78 (219)
T ss_dssp CCHHHH
T ss_pred cCcHHH
Confidence 999995
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0056 Score=49.05 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=49.5
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-C----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-P----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-~----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|.+|..+.+.-. ..++++|.|...... . -.|+|............ .+ +-..
T Consensus 1 P~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~-------------~~---------~~~~ 56 (93)
T d2vkwa2 1 PSAPKLEGQMGE--DGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIR-------------LP---------SGSD 56 (93)
T ss_dssp CCCCEEEEEECT--TSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEE-------------EC---------TTCC
T ss_pred CCCCccCEeEEc--CCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeee-------------cc---------CCce
Confidence 456766555433 468999999976532 1 25777643322111000 01 1123
Q ss_pred EEEEcCCCCCcEEEEEEeeC-CCCcce--eeEEECC
Q 046241 288 TAVMTGLRPSATFSYRYGSD-LVGWSD--KIQFKTP 320 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~ 320 (638)
...++||+|++.|.+||..- ..|.|+ ...|+|.
T Consensus 57 ~~~i~~L~p~t~Y~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 57 HVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEEEeccccceEEEEEEEEEcCCCCcCCEeEEEEec
Confidence 57889999999999999763 234443 4667774
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.70 E-value=0.007 Score=48.11 Aligned_cols=82 Identities=12% Similarity=0.207 Sum_probs=51.3
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+.+.... .++++|+|.-.... .-.|+|............. ++....+.++
T Consensus 4 aP~n~~~~~~s--~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~----------------------~~~~~~~~i~ 59 (92)
T d1qg3a1 4 APQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLL----------------------DSKVPSVELT 59 (92)
T ss_dssp CCEEEEEEECS--TTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEE----------------------EESSSEEEEC
T ss_pred cCCCCEEEEcc--CCEEEEEEEecCCCccceEEeeeeccccccEEEEe----------------------cCCccEEEEC
Confidence 57667666553 58999999865432 2367775432221111100 1122357899
Q ss_pred CCCCCcEEEEEEeeCC----CCcceeeEEECC
Q 046241 293 GLRPSATFSYRYGSDL----VGWSDKIQFKTP 320 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~ 320 (638)
||+|+|.|.+||..-+ ..||+...|+|+
T Consensus 60 ~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 60 NLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp SCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred CCCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 9999999999997532 247888888884
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.59 E-value=0.0076 Score=49.37 Aligned_cols=87 Identities=15% Similarity=0.203 Sum_probs=51.4
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccc-eeeEeecCCcccccccCCCCCCcCccCCceEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETS-KVTTFTQDDMCNATALQSPAKDFGWHDPGYIHT 288 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~-~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~ 288 (638)
.|..+.+.......+++.|+|....... -.|+|........ ...... ..+-.+.
T Consensus 14 pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~--------------------~~~~~~~ 73 (111)
T d1x5ka1 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEP--------------------VVGNRLT 73 (111)
T ss_dssp CCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEE--------------------ESTTCSE
T ss_pred CCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEE--------------------eCCCeeE
Confidence 4666666655445689999998543321 2455543222110 000000 0112235
Q ss_pred EEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCC
Q 046241 289 AVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPP 321 (638)
Q Consensus 289 a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p 321 (638)
..|.||+|++.|.+||..-+ ..||+...|+|+.
T Consensus 74 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 74 HQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp EEECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 67899999999999998632 2478888899964
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.55 E-value=0.0083 Score=48.60 Aligned_cols=85 Identities=18% Similarity=0.305 Sum_probs=52.6
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
+|.++.++......+++.|+|...... .-.|+|........ ..... -++-...+.|
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~-~~~~~--------------------v~~~~~~~~l 60 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGR-WKEAT--------------------IPGHLNSYTI 60 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSC-CEEEE--------------------ECSSCCEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccce-eeeec--------------------cCCCccEEEE
Confidence 577788877766678999999976432 23577764322111 01110 1223346799
Q ss_pred cCCCCCcEEEEEEeeC-CCCcce--eeEEECC
Q 046241 292 TGLRPSATFSYRYGSD-LVGWSD--KIQFKTP 320 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~ 320 (638)
+||+|||.|..+|..- ..|.|+ ...|+|.
T Consensus 61 ~gL~P~t~Y~v~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 61 KGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp CSCCSSEEEEEEEEEEESSSCEEEEEEEEEEC
T ss_pred CCcccCcEEEEEEEEEeCCCccCcEEEEEEec
Confidence 9999999999999752 234443 4557764
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.45 E-value=0.0084 Score=48.41 Aligned_cols=69 Identities=16% Similarity=0.258 Sum_probs=45.0
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
|.+|..+.+.-.. .+++.|+|...... .-.|+|.......-... .. +.....
T Consensus 3 P~~P~nl~v~~~~--~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~--~~---------------------~~~~~~ 57 (95)
T d2b5ic1 3 PWAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ--SV---------------------DYRHKF 57 (95)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE--EE---------------------CSSCEE
T ss_pred CcCCCCCEEEEEe--CCEEEEEECCCCCceeEEEEEEEEcCCCceeeEe--ee---------------------ccccee
Confidence 6688888877554 47999999976543 24677765432211110 00 011357
Q ss_pred EEcCCCCCcEEEEEEee
Q 046241 290 VMTGLRPSATFSYRYGS 306 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~ 306 (638)
+|.+|.|+|.|.+||..
T Consensus 58 ~~~~L~p~t~Y~frVRa 74 (95)
T d2b5ic1 58 SLPSVDGQKRYTFRVRS 74 (95)
T ss_dssp EECSCCTTSCEEEEEEE
T ss_pred EcCCCCCCCEEEEEEEE
Confidence 88999999999999976
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.37 E-value=0.0083 Score=48.76 Aligned_cols=84 Identities=21% Similarity=0.416 Sum_probs=49.0
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--C-cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--P-QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTA 289 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~-~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a 289 (638)
|.+|..+.+.... .+++.|+|...... . -.|+|............ .+ +. ...
T Consensus 11 P~~P~~~~~~~~~--~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~-------------~~--------~~--~~~ 65 (102)
T d1x5za1 11 PGQPLNFKAEPES--ETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT-------------IE--------PG--TSY 65 (102)
T ss_dssp CCCCEEEEEECSS--SSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE-------------EC--------SS--SEE
T ss_pred CcCCCCeEEEEcc--CCEEEEEEECCCCCCccceEEEEEeCCCCceEEEE-------------cC--------Cc--CEE
Confidence 5567767666543 58999999864332 1 24555432211100000 00 11 145
Q ss_pred EEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCC
Q 046241 290 VMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPP 321 (638)
Q Consensus 290 ~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p 321 (638)
.|+||+|+|.|.+||..-+ . .+|+...|+|..
T Consensus 66 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 66 RLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp EEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred EECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 7899999999999997522 2 367778888863
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=96.32 E-value=0.01 Score=47.09 Aligned_cols=80 Identities=20% Similarity=0.358 Sum_probs=46.2
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
|.+|..+.+... ..+++.|+|.-.........|....... ...+ . . . -...++
T Consensus 4 P~~P~~l~~~~~--~~~sv~lsW~~p~~~~~i~~Y~i~~~~~-~~~~--~-----------~---------~--t~~~~~ 56 (88)
T d1k85a_ 4 PTAPTNLASTAQ--TTSSITLSWTASTDNVGVTGYDVYNGTA-LATT--V-----------T---------G--TTATIS 56 (88)
T ss_dssp CCCCEEEEEEEE--CSSCEEEEEECCSCCSSEEEEEEEESSS-EEEE--E-----------S---------S--SEEEEC
T ss_pred cCCCCCcEEEEe--cCCEEEEEEeCCCCCCCEEEEEEEccce-EEEe--c-----------C---------C--CEEEEC
Confidence 667866666544 3589999998544334455553211100 0000 0 0 0 135789
Q ss_pred CCCCCcEEEEEEeeC-CC----CcceeeEEEC
Q 046241 293 GLRPSATFSYRYGSD-LV----GWSDKIQFKT 319 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~-~~----~~S~~~sF~T 319 (638)
||+|+++|.|||..- .. .+|+...++|
T Consensus 57 ~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 57 GLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 999999999999852 11 3455566655
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.29 E-value=0.0036 Score=51.13 Aligned_cols=34 Identities=29% Similarity=0.454 Sum_probs=27.9
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p 321 (638)
.+.|+||+|+|+|.+||..-+ ..+|+.-.|+|.|
T Consensus 63 ~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 63 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 468999999999999997532 2478888999987
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.28 E-value=0.0039 Score=51.68 Aligned_cols=74 Identities=12% Similarity=0.241 Sum_probs=41.8
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-C----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-P----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-~----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|.+|..+.+.......+++.|+|...... . -.|+|........ .... . .+ +...
T Consensus 11 P~~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~---~~~~-~--------~~---------~~~~ 69 (108)
T d1wf5a1 11 PHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWT---VLLA-S--------VD---------PKAT 69 (108)
T ss_dssp CCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCE---EEES-S--------CC---------TTCC
T ss_pred CCCCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCce---EEee-e--------ec---------CCcc
Confidence 44555555554444568999999865332 2 2456654322111 0000 0 01 1112
Q ss_pred EEEEcCCCCCcEEEEEEeeC
Q 046241 288 TAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
...++||+|+++|.+||..-
T Consensus 70 ~~~i~~L~p~t~Y~frV~A~ 89 (108)
T d1wf5a1 70 SVTVKGLVPARSYQFRLCAV 89 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEE
Confidence 46889999999999999763
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.025 Score=45.52 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=24.8
Q ss_pred EEEEEcCCCCCcEEEEEEeeC----C-CCcceeeEEECC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD----L-VGWSDKIQFKTP 320 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~----~-~~~S~~~sF~T~ 320 (638)
..+.|.||+|+|.|.+||... . ..||+...|+||
T Consensus 65 ~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 65 TEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp SEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 356889999999999999752 1 247888888886
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.018 Score=47.21 Aligned_cols=86 Identities=19% Similarity=0.254 Sum_probs=51.7
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCC--C----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDK--E----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~--~----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
|.+|..+.+.... .++|+|.|.-... . .-.|.|........... .. .. ...
T Consensus 11 P~~P~~l~~~~~~--~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~----------~~---------~~~ 67 (107)
T d1x5fa1 11 PSAPRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE--NT----------SH---------PGE 67 (107)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEE--EC----------SS---------TTC
T ss_pred CcCCCccEEEEec--CCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEE--EE----------eC---------CCc
Confidence 5678777776654 5899999985321 1 12566653222111110 00 01 112
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC-CC---cceeeEEECCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL-VG---WSDKIQFKTPP 321 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~~sF~T~p 321 (638)
..+.|++|.|+++|.+||..-+ .| +|....++|.|
T Consensus 68 ~~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 68 MQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 4678999999999999997632 23 56777888875
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.25 E-value=0.02 Score=45.04 Aligned_cols=71 Identities=20% Similarity=0.293 Sum_probs=43.5
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+.+.... .++++|.|...... .-.|+|............... ..+-.+.+.|+
T Consensus 3 aP~~l~v~~~~--~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~~-------------------~~~~~~~~~i~ 61 (92)
T d1tdqa2 3 APKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPK-------------------GIGPTTKTTLT 61 (92)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEEC-------------------CSSSEEEEEEC
T ss_pred cCcCCEEEEec--CCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEEe-------------------cCCCeeEEEEC
Confidence 56666665543 58999999875432 346777643221111111000 12334678999
Q ss_pred CCCCCcEEEEEEee
Q 046241 293 GLRPSATFSYRYGS 306 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~ 306 (638)
||+|+|.|.++|..
T Consensus 62 ~L~p~t~Y~~~V~a 75 (92)
T d1tdqa2 62 DLVPGTEYGVGISA 75 (92)
T ss_dssp SCCTTCEEEEEEEE
T ss_pred CccCCCEEEEEEEE
Confidence 99999999999975
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.006 Score=50.63 Aligned_cols=90 Identities=17% Similarity=0.293 Sum_probs=52.7
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCC-C----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDK-E----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~-~----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+.+...+...++++|.|.-... . .-.|+|........ ....... ..+-..
T Consensus 5 P~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~--~~~~~~~-----------------~~~~~~ 65 (115)
T d1bqua2 5 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTW--SQIPPED-----------------TASTRS 65 (115)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSC--EECCGGG-----------------GCSCCS
T ss_pred CCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeee--ecccccc-----------------cccccc
Confidence 5678777777655567899999985432 1 23566654322111 1111100 012224
Q ss_pred EEEEcCCCCCcEEEEEEeeC---C-C---CcceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSD---L-V---GWSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~---~-~---~~S~~~sF~T~p 321 (638)
.+.|++|.|+++|.+||... + + .||....|+|+.
T Consensus 66 ~~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 66 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 67899999999999999641 1 1 356777888864
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.09 E-value=0.031 Score=45.15 Aligned_cols=33 Identities=15% Similarity=0.280 Sum_probs=25.0
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-----CCcceeeEEECC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-----VGWSDKIQFKTP 320 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-----~~~S~~~sF~T~ 320 (638)
...+.||.|||+|.+||.... ..||+.-.++||
T Consensus 66 ~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 66 QFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp EEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred EEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeECc
Confidence 578899999999999997531 246777777664
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.08 E-value=0.012 Score=47.71 Aligned_cols=86 Identities=13% Similarity=0.097 Sum_probs=50.8
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
|.+|..+++.-. +.+++.|+|...... .-.|+|....... ..... + +-.....
T Consensus 1 P~~P~~l~~~~~--t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~-~~~~~-------------~---------~~~~~~~ 55 (102)
T d2cuha1 1 PDGPTQLRALNL--TEGFAVLHWKPPQNPVDTYDIQVTAPGAPP-LQAET-------------P---------GSAVDYP 55 (102)
T ss_dssp CSSCEEEECCCC--SSSCEEEEEECCSSCCSEEEEEEECSSSCC-EEEEE-------------E---------TTCSEEE
T ss_pred CcCCCccEEEEe--CCCEEEEEEEeeeccceeeEEEEEeccccc-eeeee-------------e---------eeeeeEE
Confidence 456766666543 468999999865432 2467776432211 11100 0 1113568
Q ss_pred EcCCCCCcEEEEEEeeCC-CCcc--eeeEEECCCCC
Q 046241 291 MTGLRPSATFSYRYGSDL-VGWS--DKIQFKTPPAG 323 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~~-~~~S--~~~sF~T~p~~ 323 (638)
|+||+|+|+|.++|..-. .+.| ....|+|.+.+
T Consensus 56 l~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~T~~~~ 91 (102)
T d2cuha1 56 LHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEA 91 (102)
T ss_dssp ECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCC
T ss_pred EccEEeeEEEEEEEEEEeCCCCcCCEEEEEECCCCC
Confidence 999999999999997532 2333 34568887543
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.07 E-value=0.025 Score=45.98 Aligned_cols=86 Identities=15% Similarity=0.266 Sum_probs=51.5
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--C----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--P----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
+.+|..+.+....+ .+++.|.|...... . -.|+|......... ..... +. --
T Consensus 5 ~dPP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~-~~~~~-----------~~---------~~ 62 (105)
T d1erna2 5 LDAPVGLVARLADE-SGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSV-QRVEI-----------LE---------GR 62 (105)
T ss_dssp CCCCEEEEEEECCC--CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEE-EEEEE-----------CT---------TC
T ss_pred cCCCCCCEEEEecC-CCcEEEEeeeccccccceEEEEEEEEecCCCCCce-EEEee-----------cC---------Cc
Confidence 45788888887654 57899999865322 1 25677543321111 00000 00 11
Q ss_pred EEEEEcCCCCCcEEEEEEeeC--C----C---CcceeeEEECC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD--L----V---GWSDKIQFKTP 320 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~--~----~---~~S~~~sF~T~ 320 (638)
....|.+|+|+|+|.+||... + + .||+..+++||
T Consensus 63 t~~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 63 TECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp CEEEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred cEEEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 256799999999999999762 1 1 36777888875
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.00 E-value=0.016 Score=46.52 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=25.5
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTP 320 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~ 320 (638)
.+.|+||+|+|.|.+||...+ ..||..-.++|.
T Consensus 62 ~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 62 SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp EEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 467899999999999997532 247777777774
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.97 E-value=0.02 Score=46.06 Aligned_cols=86 Identities=12% Similarity=0.146 Sum_probs=51.5
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCCCC-------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGDKE-------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~~~-------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
.+|.-++..... .++|+|.|...... .-.|+|........... .. .+ ..+..
T Consensus 3 ~~P~~~~~~~~s--~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~--~~--~~---------------~~~~~ 61 (101)
T d1x4ya1 3 AGPYITFTDAVN--ETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDY--KK--DM---------------VEGDR 61 (101)
T ss_dssp SCCEEEEEECSS--SSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGC--CC--EE---------------EETTC
T ss_pred CCCcccEEEEEc--CCEEEEEEecCcccccccceEEEEEEeeeccceeeeee--eE--EE---------------EcCCe
Confidence 357667776664 57999999864321 12477764322111000 00 00 01122
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTP 320 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~ 320 (638)
....|.||+|++.|.+||..-+ ..||+...++|.
T Consensus 62 ~~~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 62 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECC
T ss_pred eEEEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEcc
Confidence 3457899999999999998632 358888899985
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.93 E-value=0.018 Score=46.52 Aligned_cols=34 Identities=26% Similarity=0.470 Sum_probs=27.2
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPP 321 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p 321 (638)
..++++|+|+++|.+||...+ ..||+.-.++|.|
T Consensus 59 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 59 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 457899999999999997632 2467888898876
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.90 E-value=0.02 Score=46.48 Aligned_cols=72 Identities=17% Similarity=0.268 Sum_probs=44.8
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCC---C----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDK---E----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~---~----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
|.+|..+.+.......+++.|+|..... . .-.|+|....... ..+... .+.
T Consensus 2 P~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~--~~~~~~--------------------~~~ 59 (104)
T d1n26a3 2 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKT--FTTWMV--------------------KDL 59 (104)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSC--CEEEEC--------------------GGG
T ss_pred CcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCc--eeeecc--------------------ccc
Confidence 6678888877655556899999996432 1 1356665432211 111110 011
Q ss_pred EEEEEEcCCCCCcEEEEEEee
Q 046241 286 IHTAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~ 306 (638)
.....|.+|+|++.|.+||..
T Consensus 60 ~~~~~i~~L~p~t~Y~~rVra 80 (104)
T d1n26a3 60 QHHCVIHDAWSGLRHVVQLRA 80 (104)
T ss_dssp CSEEEESSCCTTCCEEEEEEE
T ss_pred eEEEEECCCCCCCEEEEEEEE
Confidence 235678999999999999975
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.89 E-value=0.048 Score=44.38 Aligned_cols=89 Identities=11% Similarity=0.131 Sum_probs=51.4
Q ss_pred cccCCCCCCceEEEeecCCCCCceEEEEEeCCCC--------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcC
Q 046241 208 INFANPKSPLYGHLSSSDSTATSMRVTWVSGDKE--------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFG 279 (638)
Q Consensus 208 ~~f~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g 279 (638)
+....|..|..+.+.......+++.|+|...... .-.++|....... +.. .
T Consensus 3 ~~iVkP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~-----~~~-------~--------- 61 (109)
T d1uc6a_ 3 LGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQ-----WQH-------V--------- 61 (109)
T ss_dssp TTSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCC-----CCC-------E---------
T ss_pred CCCEECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCc-----eEE-------e---------
Confidence 4445677898888876554568999999975321 1234444322110 000 0
Q ss_pred ccCCceEEEEEEcCCCCCcEEEEEEeeCC---C---CcceeeEEEC
Q 046241 280 WHDPGYIHTAVMTGLRPSATFSYRYGSDL---V---GWSDKIQFKT 319 (638)
Q Consensus 280 ~~~~g~~h~a~l~gL~P~T~Y~Yrvg~~~---~---~~S~~~sF~T 319 (638)
..+-.....|.+|.|+|.|.+||...+ . .||+...++|
T Consensus 62 --~~~~~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 62 --ELSNGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp --EESSCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred --ccCCceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 001113567899999999999997521 2 3555555544
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.89 E-value=0.03 Score=46.13 Aligned_cols=87 Identities=20% Similarity=0.267 Sum_probs=53.1
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-----------cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCcc
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----------QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWH 281 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----------~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~ 281 (638)
|.+|.-+++... .+++.|+|....... -.|+|............-..
T Consensus 6 P~pP~nl~v~~~---~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~------------------- 63 (114)
T d2gysa2 6 PPEPRDLQISTD---QDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLS------------------- 63 (114)
T ss_dssp CCCCEEEEEEEE---TTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEEE-------------------
T ss_pred CCcCCCeEEEEe---CCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEeec-------------------
Confidence 678888887654 368999998764321 23555543322111110000
Q ss_pred CCceEEEEEEcCCCCCcEEEEEEeeC---C-------CCcceeeEEECCCC
Q 046241 282 DPGYIHTAVMTGLRPSATFSYRYGSD---L-------VGWSDKIQFKTPPA 322 (638)
Q Consensus 282 ~~g~~h~a~l~gL~P~T~Y~Yrvg~~---~-------~~~S~~~sF~T~p~ 322 (638)
..--..+.+.+|.|+|.|..||... + ..||+.-.|+|+|.
T Consensus 64 -~~~~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 64 -NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp -SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred -cCceEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 0122367889999999999999762 1 14788899999874
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.74 E-value=0.029 Score=44.12 Aligned_cols=68 Identities=22% Similarity=0.243 Sum_probs=41.9
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
.|..+.+.-.. .+++.|+|...... .-.|+|...........++. +-...+.++
T Consensus 3 ~P~~l~v~~v~--~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~~~----------------------~~~~~~~i~ 58 (88)
T d1qr4a2 3 SPKGISFSDIT--ENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTVD----------------------GSKTRTKLV 58 (88)
T ss_dssp CCSCEEEESCC--SSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEEEE----------------------TTCCEEEEC
T ss_pred CCcceEEEEec--CCEEEEEEEcccEeeceEEEEEEeccCCceEEEEec----------------------CCccEEEEC
Confidence 46666665543 68999999865432 23677765332211111111 111357899
Q ss_pred CCCCCcEEEEEEee
Q 046241 293 GLRPSATFSYRYGS 306 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~ 306 (638)
||+|+|+|.++|..
T Consensus 59 ~L~p~t~Y~~~V~a 72 (88)
T d1qr4a2 59 KLVPGVDYNVNIIS 72 (88)
T ss_dssp SCCSSCEEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999975
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.70 E-value=0.022 Score=45.74 Aligned_cols=73 Identities=10% Similarity=0.132 Sum_probs=37.2
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCc
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPG 284 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g 284 (638)
|.+|..+.+... ..+++.|+|...... .-.|+|......... ...... ..+
T Consensus 2 P~~P~~l~v~~~--~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~-~~~~~~------------------~~~ 60 (101)
T d1iarb2 2 PRAPGNLTVHTN--VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADF-RIYNVT------------------YLE 60 (101)
T ss_dssp CCCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCE-EEEEEC------------------SSC
T ss_pred cccCCcCEEEEE--eCCeEEEEEccccCCCCccceeeEEEEeeecccceeee-eeeeec------------------cCc
Confidence 667876766554 357999999965432 125677543322111 111100 012
Q ss_pred eEEEEEEcCCCCCcEEEEEEee
Q 046241 285 YIHTAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~ 306 (638)
-...+.+.+|+|+|+|.+||..
T Consensus 61 ~~~~~~i~~L~p~t~Y~~rVrA 82 (101)
T d1iarb2 61 PSLRIAASTLKSGISYRARVRA 82 (101)
T ss_dssp CEEEECC-----CCCEEEEEEE
T ss_pred cceEEEECCCCCCCEEEEEEEE
Confidence 3346789999999999999975
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.69 E-value=0.016 Score=47.03 Aligned_cols=82 Identities=16% Similarity=0.205 Sum_probs=48.4
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+.+.... .+++.|+|....... -.|+|........ ... .. -..
T Consensus 11 P~~P~~l~v~~~s--~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~--~~~-------------~~---------~~~ 64 (103)
T d1x5ga1 11 PGPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKE--QDV-------------DV---------SSH 64 (103)
T ss_dssp CCCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCC--CCE-------------EE---------CSS
T ss_pred cccCCCcEEEEcc--CCEEEEEEECCcCCCccEEEEEEEEEeCCCcee--EEE-------------ec---------ccc
Confidence 5667766666543 479999997543221 2466654221100 000 00 012
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTP 320 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~ 320 (638)
...|+||+|+|.|.++|..-+ +.+|+...++|.
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 65 SYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred EEecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 467899999999999997521 236777778875
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.65 E-value=0.031 Score=45.45 Aligned_cols=85 Identities=16% Similarity=0.381 Sum_probs=49.8
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-Cc----EEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-PQ----QVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-~~----~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
-|..|..+.+.... .++++|+|.-.... .+ .|+|............. . +--
T Consensus 10 ~P~~P~~~~~~~~~--~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~-------------~---------~~~ 65 (105)
T d1x3da1 10 EPDIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY-------------M---------GSQ 65 (105)
T ss_dssp CCCCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE-------------E---------ESC
T ss_pred CCcCCCCCEEEEcc--CCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEe-------------c---------CCc
Confidence 35567777776653 57999999865432 23 34443222111100000 0 111
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTP 320 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~ 320 (638)
....+.+|+|+++|.+||..-+ ..||+...|+|.
T Consensus 66 ~~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 66 KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred cEEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 2457889999999999997421 247788888884
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.58 E-value=0.028 Score=45.61 Aligned_cols=87 Identities=18% Similarity=0.183 Sum_probs=51.2
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC-------CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE-------PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~-------~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
+|..+.+.... .+++.|.|...... .-.|+|............ .......+...
T Consensus 11 pP~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~-----------------~~~~~~~~~~~ 71 (109)
T d1va9a1 11 PPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS-----------------IVEMKATGDSE 71 (109)
T ss_dssp CCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB-----------------CCBCCCCSSEE
T ss_pred CCcCcEEEEec--CCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceee-----------------eeEEecCCCee
Confidence 57777776554 58999999964321 124666532211100000 00011233456
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTP 320 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~ 320 (638)
...|++|+|+|.|.+||..-+ ..||..-.|+|.
T Consensus 72 ~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 72 VYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred EEEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 788999999999999997532 246777777774
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=95.46 E-value=0.32 Score=45.91 Aligned_cols=170 Identities=18% Similarity=0.247 Sum_probs=96.2
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc---HHHHHHHHHhhhhhccCcce
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF---LVEWDFFLHQISPVASRVSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~---~~~wd~f~~~l~~l~~~vP~ 405 (638)
+|++++||.=.. || .+.++..+..+++ +.||||..|.++ +.|. ....+++++. .+-
T Consensus 1 MkiLfiGDIvG~-----------~G-r~~v~~~Lp~Lk~-~~DfVIaNgENa-a~G~Git~k~~~~L~~~------GVD- 59 (252)
T d2z06a1 1 MRVLFIGDVMAE-----------PG-LRAVGLHLPDIRD-RYDLVIANGENA-ARGKGLDRRSYRLLREA------GVD- 59 (252)
T ss_dssp CEEEEECCBCHH-----------HH-HHHHHHHHHHHGG-GCSEEEEECTTT-TTTSSCCHHHHHHHHHH------TCC-
T ss_pred CeEEEEeccCCH-----------HH-HHHHHHHhHHHHh-hCCEEEEeeecc-CCCcCCCHHHHHHHHHh------CCC-
Confidence 589999996421 22 3444555555543 579999999998 4443 3334444432 233
Q ss_pred EEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCCCCCCCCeEEEEECCEEEEEEeCC--CCCCCcHHHHHHHHH
Q 046241 406 MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPIPARDKPWYSIEQAGVHFTVMSTE--HDWSENSEQYEWMKK 483 (638)
Q Consensus 406 ~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~~~~~~~yYsfd~G~v~fi~LDT~--~~~~~~~~Q~~WL~~ 483 (638)
..+.|||=++... .+..- + .....+-.++|...++.-|+.++.++.++.+++-. ......+.-++-+++
T Consensus 60 vIT~GNH~wdkke----i~~~i----~-~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~ 130 (252)
T d2z06a1 60 LVSLGNHAWDHKE----VYALL----E-SEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDR 130 (252)
T ss_dssp EEECCTTTTSCTT----HHHHH----H-HSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHH
T ss_pred EEEcCcccccchh----hhhhh----c-cccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHH
Confidence 4578999765322 11000 0 00111223455555677789999988777777643 211222223334444
Q ss_pred HhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 484 DMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 484 ~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
.|.. .+.+.+||=+|-=.- --+.-.-.+-+-+|.+|+-=|+|.-.
T Consensus 131 ~~~~---~~~~~i~VDfHaEaT----------SEK~A~g~~ldGrvsavvGTHTHV~T 175 (252)
T d2z06a1 131 LLEE---EKADYVLVEVHAEAT----------SEKMALAHYLDGRASAVLGTHTHVPT 175 (252)
T ss_dssp HHHH---CCCSEEEEEEECSCH----------HHHHHHHHHHBTTBSEEEEESSCSCB
T ss_pred HHhh---cCccEEEEEcccchh----------hhheeeeEecCCCEEEEEecCccccc
Confidence 4443 356778888884321 11222334556789999999999854
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.44 E-value=0.054 Score=42.46 Aligned_cols=71 Identities=18% Similarity=0.209 Sum_probs=42.9
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
.+|..+++.-. ..++++|+|...... .-.|+|....... ....... ++-...+.|
T Consensus 3 d~P~~l~v~~~--s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~-~~~~~~~--------------------~~~~~~~~i 59 (90)
T d1tena_ 3 DAPSQIEVKDV--TDTTALITWFKPLAEIDGIELTYGIKDVPG-DRTTIDL--------------------TEDENQYSI 59 (90)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEETTCTT-CCEEEEE--------------------ETTCCEEEE
T ss_pred CCCCCcEEEEe--cCCEEEEEEEeCceEeccEEEEEEEcCCCc-eeEEEEe--------------------cCCcceeeE
Confidence 36777777654 468999999864432 2367776432211 1111100 111235789
Q ss_pred cCCCCCcEEEEEEeeC
Q 046241 292 TGLRPSATFSYRYGSD 307 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~ 307 (638)
.||+|+|+|.++|..-
T Consensus 60 ~~L~p~t~Y~~~V~a~ 75 (90)
T d1tena_ 60 GNLKPDTEYEVSLISR 75 (90)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred eeecCCCEEEEEEEEE
Confidence 9999999999999763
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.42 E-value=0.043 Score=42.84 Aligned_cols=67 Identities=13% Similarity=0.257 Sum_probs=42.0
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+++... ..++++|+|...... .-.|+|....... ..... +. -.....|+
T Consensus 2 aP~~l~v~~~--t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~-~~~~~-------------~~---------~~~~~~~~ 56 (87)
T d1qr4a1 2 NPKDLEVSDP--TETTLSLRWRRPVAKFDRYRLTYVSPSGKK-NEMEI-------------PV---------DSTSFILR 56 (87)
T ss_dssp CCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECTTCCE-EEEEE-------------CT---------TCSEEEEE
T ss_pred cCcCcEEEEe--cCCEEEEEEECCCCCcceeEEEeecCCcce-eEEeC-------------CC---------CcCEEEEC
Confidence 4666666544 468999999975442 2367886533211 10100 11 12357899
Q ss_pred CCCCCcEEEEEEee
Q 046241 293 GLRPSATFSYRYGS 306 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~ 306 (638)
||+|+++|.++|..
T Consensus 57 ~L~p~t~Y~v~V~a 70 (87)
T d1qr4a1 57 GLDAGTEYTISLVA 70 (87)
T ss_dssp SCCSSCEEEEEEEE
T ss_pred CCCcCCEEEEEEEE
Confidence 99999999999976
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.42 E-value=0.034 Score=44.46 Aligned_cols=84 Identities=11% Similarity=0.075 Sum_probs=47.7
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--C-cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--P-QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~-~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
.|..+++....+ .++++|.|...... . -.|+|............... ++-...+.|
T Consensus 4 PP~~l~v~~~~~-ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~~~~--------------------~~~~~~~~i 62 (94)
T d1fnfa1 4 PPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVV--------------------HADQSSCTF 62 (94)
T ss_dssp CCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEEE--------------------CTTCCEEEC
T ss_pred cCcCcEEEEecC-CCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEEEEe--------------------CCCccEEEE
Confidence 577777765432 45699999865332 2 35777643221111111000 112246889
Q ss_pred cCCCCCcEEEEEEeeC-CCCcceeeEEEC
Q 046241 292 TGLRPSATFSYRYGSD-LVGWSDKIQFKT 319 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~-~~~~S~~~sF~T 319 (638)
+||+|||.|..+|..- +.+.|...+.+.
T Consensus 63 ~~L~p~t~Y~v~V~a~~~~g~s~p~s~t~ 91 (94)
T d1fnfa1 63 DNLSPGLEYNVSVYTVKDDKESVPISDTI 91 (94)
T ss_dssp CCCCTTSCEEEEEEEEETTEECCCEEEEE
T ss_pred CCCCCCCEEEEEEEEEcCCCEeCCEEEEE
Confidence 9999999999999753 334554444443
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.38 E-value=0.079 Score=41.55 Aligned_cols=69 Identities=16% Similarity=0.264 Sum_probs=42.5
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
.|..+++.... .++++|.|...... .-.|+|............ .+ +-.....|+
T Consensus 4 pP~~l~v~~~~--~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~~-------------~~---------~~~~~~~i~ 59 (90)
T d1fnha2 4 PPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPIQRT-------------IK---------PDVRSYTIT 59 (90)
T ss_dssp CCEEEEEEEEC--SSEEEEEEECCSSCCCCEEEEEEESSSSCCEEEE-------------CC---------TTCSEEEEE
T ss_pred cCCCCEEEEec--CCEEEEEEECCCCCCceeEEEEEEccCCceEEEe-------------cC---------CCccEEEeC
Confidence 57777776554 58999999854332 346777643321111110 01 112356899
Q ss_pred CCCCCcEEEEEEeeC
Q 046241 293 GLRPSATFSYRYGSD 307 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~ 307 (638)
||+|||+|.++|..-
T Consensus 60 ~L~p~t~Y~~~V~a~ 74 (90)
T d1fnha2 60 GLQPGTDYKIYLYTL 74 (90)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred CCCCCcEEEEEEEEE
Confidence 999999999999763
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.34 E-value=0.06 Score=42.09 Aligned_cols=70 Identities=11% Similarity=0.158 Sum_probs=41.4
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+.+.... .++++|.|...... ...++|......... .... .+. -.-..+|+
T Consensus 2 pP~~l~~~~v~--~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~-~~~~-----------~~~---------~~~~~~i~ 58 (90)
T d1fnha1 2 APTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPM-KEIN-----------LAP---------DSSSVVVS 58 (90)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSCSCC-CEEE-----------ECT---------TCCEEEEC
T ss_pred CCCCEEEEEec--CCEEEEEEEccceeccceEEEEEeeeCCCce-EEEE-----------eCC---------CCeEEEEe
Confidence 46666666543 58999999875442 235666542221110 0000 011 11257899
Q ss_pred CCCCCcEEEEEEeeC
Q 046241 293 GLRPSATFSYRYGSD 307 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~ 307 (638)
||+|||+|.+||..-
T Consensus 59 ~L~p~t~Y~~~V~a~ 73 (90)
T d1fnha1 59 GLMVATKYEVSVYAL 73 (90)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred cccCceEEEEEEEEE
Confidence 999999999999763
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.17 E-value=0.093 Score=41.29 Aligned_cols=82 Identities=18% Similarity=0.211 Sum_probs=47.8
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+.+.- -..++++|+|...... .-.|+|....... ..... + +......|+
T Consensus 4 ~P~~l~~~~--~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~---~~~~~-----------~---------~~~~~~~i~ 58 (93)
T d2cuma1 4 APRDLEAKE--VTPRTALLTWTEPPVRPAGYLLSFHTPGGQT---QEILL-----------P---------GGITSHQLL 58 (93)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEECTTSCE---EEEEE-----------C---------SSCSEEEEC
T ss_pred cCCCCEEEE--eCCCEEEEEEEccccccccEEEEEEcccccc---EEEEE-----------C---------CCccEEEEe
Confidence 465555443 3468999999875432 2467786533211 11100 1 111256899
Q ss_pred CCCCCcEEEEEEeeC-CCCcce--eeEEECCC
Q 046241 293 GLRPSATFSYRYGSD-LVGWSD--KIQFKTPP 321 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~p 321 (638)
||+|||+|.++|..- +.+.|+ ...|+|..
T Consensus 59 ~L~p~t~Y~~~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 59 GLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp SCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred CccCCCEEEEEEEEEeCCCCCCCEEEEEEeCC
Confidence 999999999999753 234443 34577753
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.13 E-value=0.052 Score=42.44 Aligned_cols=76 Identities=16% Similarity=0.177 Sum_probs=44.5
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+++.... .++++|+|.-.... .-.|+|........ .... ..+ +-.....|+
T Consensus 3 aP~nl~v~~~~--~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~-----~~~~-------~~~---------~~~~~~~~~ 59 (89)
T d1fnha3 3 APSNLRFLATT--PNSLLVSWQPPRARITGYIIKYEKPGSPPR-----EVVP-------RPR---------PGVTEATIT 59 (89)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEECTTSCCE-----ECTT-------CCC---------TTCCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEeCCCcCCceEEEEEeeccCCcc-----EEEE-------EcC---------CCccEEEEE
Confidence 56666665543 58999999865432 23677765332110 0000 001 112357899
Q ss_pred CCCCCcEEEEEEeeC-CCCcce
Q 046241 293 GLRPSATFSYRYGSD-LVGWSD 313 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~-~~~~S~ 313 (638)
||+|+|.|.++|..- +.+.|+
T Consensus 60 ~L~p~t~Y~~~V~a~n~~g~S~ 81 (89)
T d1fnha3 60 GLEPGTEYTIYVIALKNNQKSE 81 (89)
T ss_dssp SCCTTCEEEEEEEEESSSCEEE
T ss_pred eeeCCCEEEEEEEEEcCCCEeC
Confidence 999999999999763 234444
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.03 E-value=0.04 Score=46.30 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=28.6
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPAG 323 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~~ 323 (638)
++.+|.||+|+|.|.+||..-. ..+|+...|+|++..
T Consensus 75 ~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCcCcCCCCCEEEEeCCCC
Confidence 4568899999999999997531 235778889998754
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.92 E-value=0.034 Score=47.50 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=28.6
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
..++|+||+|+|.|.+||...+ ..||+...|+|++.
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 3578999999999999997632 24788888999754
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.91 E-value=0.078 Score=41.38 Aligned_cols=70 Identities=17% Similarity=0.183 Sum_probs=42.4
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC-C-cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE-P-QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~-~-~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+++.-. ..++++|+|...... . -.|+|......... ..... + +-...+.|+
T Consensus 3 ~P~~l~v~~v--t~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~-~~~~v-----------~---------~~~~~~~i~ 59 (89)
T d1fnfa3 3 SPTGIDFSDI--TANSFTVHWIAPRATITGYRIRHHPEHFSGRP-REDRV-----------P---------HSRNSITLT 59 (89)
T ss_dssp CCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECSCCSSCC-EEEEE-----------E---------TTCCEEEEE
T ss_pred cCcCCEEEEe--cCCEEEEEEEeCCCEEeeEEEEEEECCCCCce-EEEEE-----------C---------CCccEEEEC
Confidence 5666655543 468999999865432 2 35788653322111 00000 1 112357899
Q ss_pred CCCCCcEEEEEEeeC
Q 046241 293 GLRPSATFSYRYGSD 307 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~ 307 (638)
||+|++.|.++|..-
T Consensus 60 ~L~p~t~Y~~~V~a~ 74 (89)
T d1fnfa3 60 NLTPGTEYVVSIVAL 74 (89)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred CCcccCEEEEEEEEE
Confidence 999999999999763
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.90 E-value=0.048 Score=44.89 Aligned_cols=84 Identities=20% Similarity=0.243 Sum_probs=50.9
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|.-+++..+ .+++.|+|.-.... .-.|+|+...... .... . + +-..
T Consensus 21 P~~P~~~~~~~~---~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~-~~~~--~-----------~---------~~~~ 74 (113)
T d1x5ia1 21 PEVPSSLHVRPL---VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHA-QTIK--V-----------D---------YKQR 74 (113)
T ss_dssp CCSCSEEEEEEE---TTEEEEEEECCSCTTBCCCEEEEEECSSCGGG-EEEE--C-----------C---------TTCC
T ss_pred CCCCEeeeeeeC---CCEEEEEEEccccCCccEEEEEEEeeeccccc-eeee--e-----------e---------CCcc
Confidence 567877777654 36899999954322 1267776533211 0000 0 1 1123
Q ss_pred EEEEcCCCCCcEEEEEEeeC-CCCcce--eeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSD-LVGWSD--KIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T~p~ 322 (638)
..+|.||+|++.|.+||..- ..|+|+ ..+++|.|.
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 75 YYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp EEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEeccccCcEEEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 56799999999999999763 335554 345788764
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.88 E-value=0.03 Score=45.85 Aligned_cols=86 Identities=12% Similarity=0.064 Sum_probs=50.0
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
+..|.-+.... ..++++|+|.-.... .-.|+|.............. + +..+
T Consensus 8 ~sPP~~~~~~~---t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~ 63 (108)
T d1v5ja_ 8 LSPPRGLVAVR---TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAV------------A---------GTET 63 (108)
T ss_dssp CCCCEEEEEEE---CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEEEEEEE------------C---------SSCC
T ss_pred CCcCCCeEEEE---cCCEEEEEEEecccCCCceeEEEEEeeeeeeeeeeccccc------------c---------ceee
Confidence 44576665544 247899999854322 13677765433221111000 1 1224
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~ 322 (638)
.+.+.||+|++.|.|||..-+ . .+|+...++|...
T Consensus 64 ~~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 64 ELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred eEEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 678999999999999997532 2 3556666777543
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.86 E-value=0.092 Score=41.49 Aligned_cols=21 Identities=10% Similarity=0.240 Sum_probs=18.2
Q ss_pred EEEEEcCCCCCcEEEEEEeeC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
+...|+||+|+|.|.+||..-
T Consensus 65 ~~~~i~~L~p~t~Y~~~V~A~ 85 (95)
T d2ibga1 65 RSFKIAPLETATMYEFKLQSF 85 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEE
T ss_pred eEEEEeeccCCeEEEEEEEEE
Confidence 457899999999999999863
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.84 E-value=0.024 Score=46.21 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=24.7
Q ss_pred EEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTP 320 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~ 320 (638)
...+.||+||++|.+||...+ ..||+...|+|+
T Consensus 69 ~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 69 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 105 (107)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred EEEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEECC
Confidence 357899999999999997632 246666667764
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.80 E-value=0.028 Score=45.14 Aligned_cols=80 Identities=18% Similarity=0.203 Sum_probs=42.8
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAV 290 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~ 290 (638)
|..|..+++.-. +.++++|.|...... ...|+|.......... ..... +... ...++-.....
T Consensus 4 Pp~~~~l~v~~~--t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~-----~~~~~------~~~~--~~~~~~~~~~~ 68 (101)
T d2cuia1 4 RPRLSQLSVTDV--TTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEP-----HPRPL------LQRE--LMVPGTRHSAV 68 (101)
T ss_dssp CCCCCCCEEESC--CSSCEEEECCCCTTSCSEEEEEEECCCCSSSCC-----CSSCC------CCEE--EEEETTCCEEE
T ss_pred ccCCCCcEEEEE--CCCEEEEEEEeccccccceEEEEEecCCCceee-----ccCCc------ceeE--eecccceeEEE
Confidence 445666666654 468999999654332 2467776432111000 00000 0000 00112234568
Q ss_pred EcCCCCCcEEEEEEeeC
Q 046241 291 MTGLRPSATFSYRYGSD 307 (638)
Q Consensus 291 l~gL~P~T~Y~Yrvg~~ 307 (638)
|.||+|+|+|.++|..-
T Consensus 69 v~~L~p~t~Y~~~V~a~ 85 (101)
T d2cuia1 69 LRDLRSGTLYSLTLYGL 85 (101)
T ss_dssp ECSCCTTCEEEEEEEEE
T ss_pred eCCCCcCCEEEEEEEEE
Confidence 89999999999999763
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.77 E-value=0.029 Score=45.82 Aligned_cols=76 Identities=16% Similarity=0.148 Sum_probs=42.3
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccce-eeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSK-VTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~-~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
|..|..+.+... ..++++|.|.-.... .-.|+|......... ........ ..+..
T Consensus 11 P~~P~~~~~~~~--~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~ 71 (111)
T d1wisa1 11 PGPPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS-----------------NEPDA 71 (111)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE-----------------SCTTC
T ss_pred CcCCCCCEEEEc--CCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeee-----------------cccce
Confidence 567777766543 368999999854321 125666542221110 00000000 01112
Q ss_pred EEEEEcCCCCCcEEEEEEeeC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
....|.||+|++.|.+||..-
T Consensus 72 ~~~~v~~L~p~t~Y~frV~A~ 92 (111)
T d1wisa1 72 RSMEVPDLNPFTCYSFRMRQV 92 (111)
T ss_dssp SEEEECSCCTTSEECCCCEEE
T ss_pred eEEEeCCCCCCCEEEEEEEEE
Confidence 346789999999999999863
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.73 E-value=0.08 Score=43.01 Aligned_cols=29 Identities=28% Similarity=0.306 Sum_probs=22.1
Q ss_pred ceEEEEEEcCCCCCcEEEEEEeeC-CCCcc
Q 046241 284 GYIHTAVMTGLRPSATFSYRYGSD-LVGWS 312 (638)
Q Consensus 284 g~~h~a~l~gL~P~T~Y~Yrvg~~-~~~~S 312 (638)
+--...+|+||+|+|+|.+||..- ..|.|
T Consensus 65 ~~~~~~~i~~L~p~t~Y~frV~A~N~~G~s 94 (107)
T d2ic2a1 65 GKSFTASVTDLKPQHTYRFRILAVYSNNDN 94 (107)
T ss_dssp EEEEEEEECSCCSSEEEEEEEEEEETTSCE
T ss_pred cceeEEEECCCcCCcEEEEEEEEEcCCCCC
Confidence 445678999999999999999863 23444
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.71 E-value=0.049 Score=44.15 Aligned_cols=36 Identities=17% Similarity=0.355 Sum_probs=26.8
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeC----C---CCcceeeEEECC
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSD----L---VGWSDKIQFKTP 320 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~----~---~~~S~~~sF~T~ 320 (638)
-.+...|.||+|+|.|.+||..- . ..||+..+++|.
T Consensus 62 ~~~~~~i~~L~p~t~Y~frVra~n~~g~G~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 62 EALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTT 104 (105)
T ss_dssp CEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCC
T ss_pred CcceeEEecccCCeEEEEEEEEEeCCCCCCCcCCCCCEEEeCC
Confidence 44667899999999999999752 1 136777777763
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.69 E-value=0.11 Score=40.90 Aligned_cols=83 Identities=22% Similarity=0.223 Sum_probs=47.8
Q ss_pred CCCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 214 KSPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 214 ~~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
.+|..+.+.... .++++|+|.-.... .-.|+|...... .....+.. + +-...+.+
T Consensus 5 ~~P~~l~v~~v~--~~si~v~W~~p~~~~~~y~i~~~~~~~~-~~~~~~~~-----------~---------~~~~~~~i 61 (93)
T d1tdqa1 5 DGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGE-GGKTTFRL-----------Q---------PPLSQYSV 61 (93)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSS-CCCEEEEE-----------C---------TTCSEEEE
T ss_pred CcCCCCEEEEeC--CCEEEEEEEccccCCCceEEEEEeccCc-ceeeEEEe-----------C---------CCceEEEE
Confidence 367777776654 57899999854432 236777643221 11111111 1 11235689
Q ss_pred cCCCCCcEEEEEEeeC-CCCcce--eeEEEC
Q 046241 292 TGLRPSATFSYRYGSD-LVGWSD--KIQFKT 319 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~-~~~~S~--~~sF~T 319 (638)
+||+|+|+|..+|..- +.+.|+ ...|+|
T Consensus 62 ~~L~p~t~Y~v~V~a~~~~g~s~~~~~~~tT 92 (93)
T d1tdqa1 62 QALRPGSRYEVSISAVRGTNESDASSTQFTT 92 (93)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred eCcccceEEEEEEEEEeCCCCcCCEEEEEEC
Confidence 9999999999999763 223332 344655
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.55 E-value=0.076 Score=41.34 Aligned_cols=68 Identities=16% Similarity=0.253 Sum_probs=42.7
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
.|..+.+.... .++++|.|...... .-.|+|....... ...... + -.-++.|+
T Consensus 3 ~P~nl~v~~~~--~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~-~~~~~~------------~----------~~~~~~~~ 57 (86)
T d1tdqa3 3 SPRDLMVTASS--ETSISLIWTKASGPIDHYRITFTPSSGIS-SEVTVP------------R----------DRTSYTLT 57 (86)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCCSCCSEEEEEEECSSSCC-EEEEEE------------S----------SCSEEEEC
T ss_pred cCCCCEEEEec--CCEEEEEEeCCCCCccceEEEEecccccc-eEEEeC------------C----------CccEEEEC
Confidence 46666666543 58999999876543 2478887533211 111100 0 11257899
Q ss_pred CCCCCcEEEEEEeeC
Q 046241 293 GLRPSATFSYRYGSD 307 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~ 307 (638)
||+|||.|.++|..-
T Consensus 58 ~L~p~t~Y~v~V~a~ 72 (86)
T d1tdqa3 58 DLEPGAEYIISITAE 72 (86)
T ss_dssp CCCTTCCEEEEEEEE
T ss_pred CCccccEEEEEEEEE
Confidence 999999999999763
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.50 E-value=0.09 Score=43.89 Aligned_cols=90 Identities=21% Similarity=0.316 Sum_probs=50.0
Q ss_pred CCCCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 211 ANPKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 211 ~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
.-|..|..+++.... .+++.|.|.-..... ..++|............... ...
T Consensus 15 d~P~~P~~~~v~~~~--~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------------------~~~ 72 (127)
T d1ueya_ 15 DVPNPPFDLELTDQL--DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE--------------------VSG 72 (127)
T ss_dssp CSCCCCEEEEEECCS--SSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE--------------------EES
T ss_pred ccCcCCCCcEEEEec--CCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEee--------------------cCC
Confidence 456778877776654 578999998654432 23444432211111000000 011
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCC-CC---ccee-eEEECCCC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDL-VG---WSDK-IQFKTPPA 322 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~-~sF~T~p~ 322 (638)
.+...+.+|+|+++|.+||..-+ .+ +|.. ..|+|.+.
T Consensus 73 ~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 73 TQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp SCCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred ceEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 12457889999999999997522 22 4433 44677654
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.49 E-value=0.075 Score=41.90 Aligned_cols=19 Identities=26% Similarity=0.532 Sum_probs=16.9
Q ss_pred EEEEcCCCCCcEEEEEEee
Q 046241 288 TAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~ 306 (638)
...|+||+|++.|.+||..
T Consensus 56 ~~~i~~L~p~t~Y~~~V~A 74 (94)
T d2dn7a1 56 HFTVTGLHKGTTYIFRLAA 74 (94)
T ss_dssp EEEEECCCTTCEEEEEEEE
T ss_pred EEEEEccCCeeEEEEEEEE
Confidence 4578999999999999985
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.49 E-value=0.049 Score=44.66 Aligned_cols=77 Identities=22% Similarity=0.308 Sum_probs=43.3
Q ss_pred cCCCCCCceEEEeecCCCCCceEEEEEeCCC-CC----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCc
Q 046241 210 FANPKSPLYGHLSSSDSTATSMRVTWVSGDK-EP----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPG 284 (638)
Q Consensus 210 f~~~~~P~~~~ls~~~~~~~sm~V~W~t~~~-~~----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g 284 (638)
++-|..|..+.+.-.. .+++.|+|.-... .. -.|+|........ ....... .+ +
T Consensus 8 ~~pP~~P~~~~v~~~~--~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~-~~~~~~~---------~~---------~ 66 (108)
T d1x4za1 8 LSPPEAPDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGD-WILATSA---------IP---------P 66 (108)
T ss_dssp CCCCCCCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCC-CEEEEEE---------EC---------T
T ss_pred cCCCccCCCCEEEEcc--CCEEEEEEECCCCCCCccEEEEEEEEecCCCCc-eEEEEEe---------ec---------C
Confidence 3446677777766543 5799999964332 11 2567754222111 0000000 01 1
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeC
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
......++||+|+|+|.+||..-
T Consensus 67 ~~~~~~v~~L~p~t~Y~frV~A~ 89 (108)
T d1x4za1 67 SRLSVEITGLEKGISYKFRVRAL 89 (108)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEE
T ss_pred CccEEEECCCCCCCEEEEEEEEE
Confidence 12356789999999999999763
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.23 E-value=0.14 Score=39.88 Aligned_cols=69 Identities=23% Similarity=0.317 Sum_probs=41.4
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC--C-cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE--P-QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~--~-~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
+|..+++.-. ..+++.|.|...... . -.|+|........ ...... + +-...+.|
T Consensus 3 pP~~l~~~~~--~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~-~~~~~~-----------~---------~~~~~~~i 59 (91)
T d1fnfa2 3 PPTDLRFTNI--GPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED-VAELSI-----------S---------PSDNAVVL 59 (91)
T ss_dssp CCEEEEEESC--CSSCEEEEEECCTTCCCSEEEEEEEETTCTTC-CEEEEE-----------C---------TTCCEEEE
T ss_pred cCCceEEEEe--CCCEEEEEEEecCCCCcceeEEEEEECCCCcc-EEEEEe-----------C---------CCceEEEE
Confidence 4665666543 468999999865432 2 3677864332111 111000 1 11235789
Q ss_pred cCCCCCcEEEEEEee
Q 046241 292 TGLRPSATFSYRYGS 306 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~ 306 (638)
+||+|+|+|.++|..
T Consensus 60 ~~L~p~t~Y~~~V~a 74 (91)
T d1fnfa2 60 TNLLPGTEYVVSVSS 74 (91)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred eceeCCCEEEEEEEE
Confidence 999999999999975
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.20 E-value=0.059 Score=44.67 Aligned_cols=87 Identities=14% Similarity=0.204 Sum_probs=47.0
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC----C-cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE----P-QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~----~-~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|..|..+.+.... .++++|+|.-.... . -.|+|...... ..+.... .. . -..
T Consensus 16 P~pP~~~~v~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~----~~~~~~~-~~------~----------~~~ 72 (117)
T d1uema_ 16 PGPPSKPQVTDVT--KNSVTLSWQPGTPGTLPASAYIIEAFSQSVS----NSWQTVA-NH------V----------KTT 72 (117)
T ss_dssp CBCCCCCEEEEEC--SSCEEEECCCCBCSSSCCCEEEEEEEETTTE----EEEEEEE-EE------E----------CSS
T ss_pred CcCCCCCEEEEcc--CCEEEEEEECCCcCCCCeEEEEEEEeccCCc----eeeEEec-cc------c----------ccc
Confidence 5567777776543 57899999744321 1 25666532211 1111000 00 0 012
Q ss_pred EEEEcCCCCCcEEEEEEeeC-CCC---cceee-EEECCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSD-LVG---WSDKI-QFKTPPA 322 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~-~~~---~S~~~-sF~T~p~ 322 (638)
..+|+||+|+|.|.+||..- ..| ||+.- .++|.+.
T Consensus 73 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~v~t~~~ 112 (117)
T d1uema_ 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred cceECCCCCCCEEEEEEEEEeCCcCCCCcCCCcCEEeCCC
Confidence 45789999999999999763 233 34332 3666543
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.17 E-value=0.095 Score=43.30 Aligned_cols=36 Identities=14% Similarity=0.200 Sum_probs=28.3
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~ 322 (638)
....|+||+|+|.|.+||..-+ . .||+...|+|.+.
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 70 LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 4678999999999999997521 1 3788889999754
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.17 E-value=0.12 Score=40.55 Aligned_cols=82 Identities=21% Similarity=0.234 Sum_probs=46.7
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCC--CCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEc
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDK--EPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMT 292 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~--~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (638)
+|..+.+.-.. .++++|.|..... ..-.++|........ .... . . .+......++
T Consensus 4 ~P~~l~v~~vt--~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~---~~~~-~---------~--------~~~~~~~~i~ 60 (94)
T d1j8ka_ 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDGIH---ELFP-A---------P--------DGEEDTAELQ 60 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTEEE---EECC-C---------C--------CSSCCEEEEC
T ss_pred CCCCCEEEEec--CCEEEEEEeCCCccccceEEEEEeecCCCc---eEEE-e---------c--------CCCccEEEEC
Confidence 56666665443 5799999975432 234677764322110 0000 0 0 1122357889
Q ss_pred CCCCCcEEEEEEeeCC-CCcce--eeEEEC
Q 046241 293 GLRPSATFSYRYGSDL-VGWSD--KIQFKT 319 (638)
Q Consensus 293 gL~P~T~Y~Yrvg~~~-~~~S~--~~sF~T 319 (638)
||+|+|.|.++|..-. .+.|+ ...++|
T Consensus 61 ~L~p~t~Y~~~V~a~~~~g~S~p~~~~~~T 90 (94)
T d1j8ka_ 61 GLRPGSEYTVSVVALHDDMESQPLIGTQST 90 (94)
T ss_dssp SCCCCSEEEEEEEECSSSCCCCCEEEEEEC
T ss_pred CCCCCCEEEEEEEEEeCCCCcCCEEEEEEE
Confidence 9999999999997632 24444 334555
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=94.15 E-value=0.077 Score=42.41 Aligned_cols=72 Identities=14% Similarity=0.337 Sum_probs=41.3
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|.+|..+.+..+ .++++|+|.-.... .-.|+|............... .+. .+
T Consensus 6 P~~P~~~~v~~~---~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~----------~~ 62 (100)
T d1cfba1 6 PNAPKLTGITCQ---ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK----------VPN----------TD 62 (100)
T ss_dssp CCCCEEEEEEEC---SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE----------EET----------TC
T ss_pred CCcCcCcEEEEc---CCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeee----------cCC----------ce
Confidence 667877777653 36899999855431 135677543221111000000 000 12
Q ss_pred EEEEcCCCCCcEEEEEEeeC
Q 046241 288 TAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
...+.+|+|+|.|.+||..-
T Consensus 63 ~~~~~~L~p~t~Y~frV~A~ 82 (100)
T d1cfba1 63 SSFVVQMSPWANYTFRVIAF 82 (100)
T ss_dssp SEEEEECCSSEEEEEEEEEE
T ss_pred EEEEecCCCCCEEEEEEEEE
Confidence 34678999999999999763
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.14 E-value=0.076 Score=42.98 Aligned_cols=71 Identities=18% Similarity=0.263 Sum_probs=40.9
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|.+|..+++.-. ..+++.|.|....... -.|+|............ . .++-..
T Consensus 11 P~~p~~l~~~~~--~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~-~--------------------~~~~~~ 67 (106)
T d1wfna1 11 PGPVGHLSFSEI--LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH-Y--------------------LPNVTL 67 (106)
T ss_dssp CCCCSCCEEESC--CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE-E--------------------ECSSCC
T ss_pred CcCCCCcEEEEe--cCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEE-e--------------------cCCCee
Confidence 556766666544 3579999997543221 24566432211100000 0 011223
Q ss_pred EEEEcCCCCCcEEEEEEee
Q 046241 288 TAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~ 306 (638)
...|+||+|+++|.+||..
T Consensus 68 ~~~i~~L~p~t~Y~~~V~A 86 (106)
T d1wfna1 68 EYRVTGLTALTTYTIEVAA 86 (106)
T ss_dssp EEEEESCCTTCEEEEEEEE
T ss_pred EEEEccCCCCCEEEEEEEE
Confidence 5688999999999999975
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.14 E-value=0.013 Score=48.95 Aligned_cols=36 Identities=19% Similarity=0.246 Sum_probs=29.1
Q ss_pred EEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEECCCC
Q 046241 287 HTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKTPPA 322 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T~p~ 322 (638)
.++.|.+|+|+|+|.+||..-+ ..||+...|+|++.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 4688999999999999997532 24788899999764
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=94.06 E-value=0.3 Score=46.88 Aligned_cols=173 Identities=13% Similarity=0.087 Sum_probs=92.4
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc---HHHHHHHHHhhhhhccCcce
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF---LVEWDFFLHQISPVASRVSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~---~~~wd~f~~~l~~l~~~vP~ 405 (638)
+|++++||.=. .||...+.+.|-+..++.++||||..|.++ +.|. ....+++++. .+-
T Consensus 5 MkILfiGDIvG-----------~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENa-a~G~Git~k~~~eL~~~------GvD- 65 (281)
T d1t71a_ 5 IKFIFLGDVYG-----------KAGRNIIKNNLAQLKSKYQADLVIVNAENT-THGKGLSLKHYEFLKEA------GVN- 65 (281)
T ss_dssp CEEEEECEEBH-----------HHHHHHHHTTHHHHHHHHTCSEEEEECTBT-TTTSSCCHHHHHHHHHH------TCC-
T ss_pred ceEEEEEccCC-----------HHHHHHHHHHhHHHHHHhCCCEEEECCccC-CCCcCCCHHHHHHHHHh------CCc-
Confidence 89999999642 123223333333334557999999999998 4443 2333444332 333
Q ss_pred EEecCCCccCCCCCCCCcccCCCCCCccchhccccccC----CCCCCCCCeEEEEECCEEEEEEeCCC--CCC--CcHHH
Q 046241 406 MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPM----PIPARDKPWYSIEQAGVHFTVMSTEH--DWS--ENSEQ 477 (638)
Q Consensus 406 ~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~----P~~~~~~~yYsfd~G~v~fi~LDT~~--~~~--~~~~Q 477 (638)
..+.|||=++... .+..-+. + ....+-.++ |....++-|..++.++.++.+++-.- ... .....
T Consensus 66 vIT~GNH~wd~ke----i~~~i~~--~--~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~p 137 (281)
T d1t71a_ 66 YITMGNHTWFQKL----DLAVVIN--K--KDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNP 137 (281)
T ss_dssp EEECCTTTTCCGG----GHHHHTT--C--TTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCH
T ss_pred EEEcCchhhhchh----hHHHHhh--c--ccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHH
Confidence 4578999764221 1000000 0 000111122 32334566888888776666666432 111 12223
Q ss_pred HHHHHHHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 478 YEWMKKDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 478 ~~WL~~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
+.-+++.+.. .+.+.+||=+|-=.-+ -+.-.-.+-+-+|.+|+-=|+|.--
T Consensus 138 f~~~~~~~~~---~~~d~i~VDfHaEATS----------EK~A~g~~lDGrvsaVvGTHTHV~T 188 (281)
T d1t71a_ 138 FKVLKELILK---RDCDLHIVDFHAETTS----------EKNAFCMAFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp HHHHHHHHTT---CCCSEEEEEEECSCHH----------HHHHHHHHHTTTSSEEEEESSSSCC
T ss_pred HHHHHHhhcc---cCCCeEEEEeccchhh----------hhhhheeeeCCcEEEEEecCccccc
Confidence 3444444443 4677788888843211 1122234456789999999999854
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.00 E-value=0.06 Score=43.95 Aligned_cols=33 Identities=15% Similarity=0.229 Sum_probs=24.1
Q ss_pred EEEEcCCCCCcEEEEEEeeC---C---CCcceeeEEECC
Q 046241 288 TAVMTGLRPSATFSYRYGSD---L---VGWSDKIQFKTP 320 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~---~---~~~S~~~sF~T~ 320 (638)
.+.|+||+|+|.|.+||... + ..||+...++||
T Consensus 66 ~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 66 SVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp EEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred eEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 67899999999999999752 2 245666555553
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.94 E-value=0.085 Score=43.74 Aligned_cols=36 Identities=19% Similarity=0.368 Sum_probs=28.0
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCCC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPAG 323 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~~ 323 (638)
..+|++|+|+|+|.+||..-+ . .||+...|+|.+..
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCC
Confidence 457899999999999998632 2 46788889987543
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.93 E-value=0.023 Score=45.87 Aligned_cols=25 Identities=24% Similarity=0.549 Sum_probs=19.8
Q ss_pred EEEEcCCCCCcEEEEEEeeC-CCCcc
Q 046241 288 TAVMTGLRPSATFSYRYGSD-LVGWS 312 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~-~~~~S 312 (638)
.+.+.||+|+++|.+||..- ..|++
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g 90 (103)
T d1qg3a2 65 MLLIENLRESQPYRYTVKARNGAGWG 90 (103)
T ss_dssp EEEECCCCTTCCEEEEEEEEETTEEC
T ss_pred EEEEeecCCCCEEEEEEEEEcCCccC
Confidence 57899999999999999753 23454
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=93.89 E-value=1.2 Score=41.92 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=95.3
Q ss_pred EEEEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCc---HHHHHHHHHhhhhhccCcce
Q 046241 329 LRFLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGF---LVEWDFFLHQISPVASRVSY 405 (638)
Q Consensus 329 ~rf~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~---~~~wd~f~~~l~~l~~~vP~ 405 (638)
+||+++||.=. .|| ...++..+..+++ +.||||..|.++ +.|. ....+++++. .+-
T Consensus 1 MkILfiGDIvG-----------~~G-r~~v~~~Lp~lk~-~~DfVIaNgENa-a~G~Git~~~~~~l~~~------GvD- 59 (255)
T d1t70a_ 1 MRVLFIGDVFG-----------QPG-RRVLQNHLPTIRP-QFDFVIVNMENS-AGGFGMHRDAARGALEA------GAG- 59 (255)
T ss_dssp CEEEEECCBBH-----------HHH-HHHHHHHHHHHGG-GCSEEEEECTBT-TTTSSCCHHHHHHHHHH------TCS-
T ss_pred CeEEEEecCCC-----------HHH-HHHHHHHhHHHHh-hCCEEEECCccC-CCCcCCCHHHHHHHHHc------CCc-
Confidence 58999999642 122 3455555555543 589999999998 4454 3334444432 333
Q ss_pred EEecCCCccCCCCCCCCcccCCCCCCccchhccccccCCC-CCCCCCeEEEEECCEEEEEEeC--CCCCCCcHHHHHHHH
Q 046241 406 MTAIGNHERDYLGSSGSVYESPDSGGECGVAYETYFPMPI-PARDKPWYSIEQAGVHFTVMST--EHDWSENSEQYEWMK 482 (638)
Q Consensus 406 ~~v~GNHD~~~~~~sgs~y~~~ds~ge~~~~y~~~f~~P~-~~~~~~yYsfd~G~v~fi~LDT--~~~~~~~~~Q~~WL~ 482 (638)
..+.|||=++-.. .+..-+ .+. .....-.++|. ..++..|+.++..+.++.+++- +....+.+.-++-++
T Consensus 60 viT~GNH~wdkke----i~~~i~--~~~-~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d 132 (255)
T d1t70a_ 60 CLTLGNHAWHHKD----IYPMLS--EDT-YPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMD 132 (255)
T ss_dssp EEECCTTTTSSTT----HHHHHH--TTC-SCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHH
T ss_pred EEEcCchhhcchh----HHHHHh--hcc-hhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHH
Confidence 4578999764322 110000 000 00011112332 2346678888888777777664 222222233445566
Q ss_pred HHhccccCCCCCeEEEEeccCCccCCCCCCCHHHHHHHHHHHHhCCCeEEEEccccccc
Q 046241 483 KDMASVDRSKTPWLIFSGHRPMYSSLSSSVDNKFVDAVEPLLLDNKVDLALFGHVHNYE 541 (638)
Q Consensus 483 ~~La~~~r~~~~w~IV~~H~P~yss~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 541 (638)
+.|+. .+.+.+||=+|-=.- --+.-.-.+-+-+|.+|+-=|+|.--
T Consensus 133 ~~l~~---~~~~~i~VDfHaEaT----------SEK~A~g~~ldGrvsav~GTHTHV~T 178 (255)
T d1t70a_ 133 ALLER---DDLGTVFVDFHAEAT----------SEKEAMGWHLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp HHTTC---SSCCEEEEEEECSCH----------HHHHHHHHHHTTSSSEEEEESSCSCB
T ss_pred HHHhh---cCCCeEEEEccchhH----------HHHHHHHhhhcCcEEEEEecCccccc
Confidence 77764 345678888884321 11122334556789999999999854
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.80 E-value=0.11 Score=40.85 Aligned_cols=70 Identities=10% Similarity=0.060 Sum_probs=39.9
Q ss_pred CCceEEEeecCCCCCceEEEEEeCCCC---CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEE
Q 046241 215 SPLYGHLSSSDSTATSMRVTWVSGDKE---PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVM 291 (638)
Q Consensus 215 ~P~~~~ls~~~~~~~sm~V~W~t~~~~---~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l 291 (638)
.|..+.+.-. ..+++.|.|...... .-.|+|....... ...... .+ +-.....|
T Consensus 8 ~P~~l~v~~~--t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~-~~~~~~-----------~~---------~~~t~~~i 64 (95)
T d2fnba_ 8 QLTDLSFVDI--TDSSIGLRWTPLNSSTIIGYRITVVAAGEGI-PIFEDF-----------VD---------SSVGYYTV 64 (95)
T ss_dssp CCTTCEEECC--CSSCEEEECCCCCCSSCCEEEEEEEEETSCC-EEEEEE-----------CC---------SSCSEEEE
T ss_pred cCCCeEEEEE--cCCEEEEEEEecCCceEEeEEEEEEEeeccc-eEEEEE-----------eC---------CCCeEEEE
Confidence 4555555443 468999999764332 1256665422211 111000 01 11235689
Q ss_pred cCCCCCcEEEEEEeeC
Q 046241 292 TGLRPSATFSYRYGSD 307 (638)
Q Consensus 292 ~gL~P~T~Y~Yrvg~~ 307 (638)
+||+|||.|.++|..-
T Consensus 65 ~~L~p~t~Y~~~V~a~ 80 (95)
T d2fnba_ 65 TGLEPGIDYDISVITL 80 (95)
T ss_dssp CCCCTTSEEEEEEEEE
T ss_pred ecccCCEEEEEEEEEE
Confidence 9999999999999753
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.71 E-value=0.11 Score=41.52 Aligned_cols=72 Identities=17% Similarity=0.220 Sum_probs=41.8
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCC--C---C-cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDK--E---P-QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYI 286 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~--~---~-~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~ 286 (638)
|.+|..+.+.-.. .++++|+|.-... . . -.|+|....... +..-.. .+.. .
T Consensus 2 P~~P~~~~v~~~~--~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~-----~~~~~~-------~~~~---------~ 58 (98)
T d1x5ya1 2 TSAPQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEE-----WVPANK-------EPVE---------R 58 (98)
T ss_dssp CCCCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCCC-----CEESSS-------SCBS---------S
T ss_pred CCCCcCcEEEEcc--CCEEEEEEECCCcCCCCCceEEEEEEEecCcce-----eEEeee-------ecCc---------e
Confidence 4567767666443 5799999985321 1 1 356775432211 111000 1111 1
Q ss_pred EEEEEcCCCCCcEEEEEEeeC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
..++++||.||+.|.+||..-
T Consensus 59 ~~~~v~~L~~~~~Y~frV~A~ 79 (98)
T d1x5ya1 59 CGFTVKDLPTGARILFRVVGV 79 (98)
T ss_dssp SEEEEECCCTTCCEEEEEEEE
T ss_pred eEEEECCCcCCeEEEEEEEEE
Confidence 256789999999999999864
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.50 E-value=0.2 Score=41.62 Aligned_cols=100 Identities=7% Similarity=0.084 Sum_probs=53.2
Q ss_pred CCCCCceEEEeecCCCCCceEEEEEeCCCC-----CcEEEEcCCCCcccee---eEeecCCcccccccCCCCCCcCccCC
Q 046241 212 NPKSPLYGHLSSSDSTATSMRVTWVSGDKE-----PQQVQYGDGKSETSKV---TTFTQDDMCNATALQSPAKDFGWHDP 283 (638)
Q Consensus 212 ~~~~P~~~~ls~~~~~~~sm~V~W~t~~~~-----~~~V~yg~~~~~~~~~---~t~~~~~~c~~~~~~~pa~~~g~~~~ 283 (638)
.|.+|..+.+... .+++.|+|.-.... .-.|+|.......... ..+.. .+++ +.... ...
T Consensus 7 ~P~aP~~v~v~~~---~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~-~~~~------~~~~~--~~~ 74 (123)
T d1wfta_ 7 GPGAPSTVRISKN---VDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMR-IYCG------LKTSC--TVT 74 (123)
T ss_dssp CCCCCEEEEEEEC---SSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEE-EEEE------SCSEE--EEE
T ss_pred CCcCCcccEEEeC---CCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEE-EecC------CceeE--eec
Confidence 4667887777652 47899999954321 2467776433211100 00000 0000 00000 000
Q ss_pred ceEEEEEEcCCCCCcEEEEEEeeCC-C---CcceeeEEECCCCC
Q 046241 284 GYIHTAVMTGLRPSATFSYRYGSDL-V---GWSDKIQFKTPPAG 323 (638)
Q Consensus 284 g~~h~a~l~gL~P~T~Y~Yrvg~~~-~---~~S~~~sF~T~p~~ 323 (638)
+-.-...+.+|+|+|.|.+||..-+ . .+|+...|+|....
T Consensus 75 ~~~~~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 75 AGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp HHHHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCS
T ss_pred CCccEEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCC
Confidence 1111236789999999999998643 2 35677888886544
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.40 E-value=0.1 Score=42.37 Aligned_cols=34 Identities=15% Similarity=0.293 Sum_probs=24.7
Q ss_pred EEEEEEcCCCCCcEEEEEEeeC----CC---CcceeeEEEC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSD----LV---GWSDKIQFKT 319 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~----~~---~~S~~~sF~T 319 (638)
.+..+|++|.|+|.|.+||..- .+ .||...+|+|
T Consensus 64 ~~~~~l~~L~p~t~Y~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 64 KDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp EEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred ceEEEEeccCCCeEEEEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 4566899999999999999652 11 3556666665
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.36 E-value=0.12 Score=42.55 Aligned_cols=85 Identities=19% Similarity=0.301 Sum_probs=47.0
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCCC-----cEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKEP-----QQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIH 287 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~~-----~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h 287 (638)
|.+|..+.+.... .+++.|.|....... -.|+|.......... ... .. . +-..
T Consensus 21 P~~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~-~~~--------~~--~---------~~~~ 78 (117)
T d1wfoa1 21 PGPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTA-TVE--------VL--A---------PSAR 78 (117)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCC-CEE--------EE--C---------TTCC
T ss_pred CcCCCCcEEEEec--CCEEEEEEECCCCCCCceEEEeeeeeeccCCCceE-eEE--------ec--C---------CceE
Confidence 5667766666543 579999997543221 246665322211100 000 00 0 1112
Q ss_pred EEEEcCCCCCcEEEEEEeeCC-CC---cceeeEEEC
Q 046241 288 TAVMTGLRPSATFSYRYGSDL-VG---WSDKIQFKT 319 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~~-~~---~S~~~sF~T 319 (638)
...++||+|+|.|.+||..-+ .| +|+...++|
T Consensus 79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 79 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 114 (117)
T ss_dssp EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred EEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEEC
Confidence 457899999999999998632 23 455555655
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.46 E-value=0.13 Score=40.24 Aligned_cols=59 Identities=27% Similarity=0.524 Sum_probs=35.5
Q ss_pred CCCceEEEEEeCCCC--CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEEEEEcCCCCCcEEEEEE
Q 046241 227 TATSMRVTWVSGDKE--PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHTAVMTGLRPSATFSYRY 304 (638)
Q Consensus 227 ~~~sm~V~W~t~~~~--~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~T~Y~Yrv 304 (638)
+.++++|+|...... .-.|+|........ ...... + +-...+.|+||+||+.|.++|
T Consensus 9 t~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~-~~~~~~-----------~---------~~~t~~~l~~L~p~t~Y~~~V 67 (91)
T d1fnaa_ 9 TPTSLLISWDAPAVTVRYYRITYGETGGNSP-VQEFTV-----------P---------GSKSTATISGLKPGVDYTITV 67 (91)
T ss_dssp CSSCEEEECCCCSSCCSEEEEEEEETTCCSC-CEEEEE-----------E---------TTCCEEEECSCCTTCEEEEEE
T ss_pred CCCEEEEEEEccceEecEEEEEEEcCCCCce-eEEEEe-----------C---------CCccEEEeCCCCCCCEEEEEE
Confidence 368999999764432 23677764322111 111100 1 111357899999999999999
Q ss_pred ee
Q 046241 305 GS 306 (638)
Q Consensus 305 g~ 306 (638)
..
T Consensus 68 ~a 69 (91)
T d1fnaa_ 68 YA 69 (91)
T ss_dssp EE
T ss_pred EE
Confidence 76
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.92 E-value=0.18 Score=49.14 Aligned_cols=69 Identities=19% Similarity=0.160 Sum_probs=39.9
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhhhhccCcceEEecC
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQISPVASRVSYMTAIG 410 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 410 (638)
+.++||+|.. ...+-++.+......-.-.+++||+++.+...-+-=.++=.+ .+.-.--++...|
T Consensus 47 v~VvGDlHG~--------------~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~slEvl~lL~al-Ki~~P~~v~lLRG 111 (288)
T d3c5wc1 47 VTVCGDVHGQ--------------FHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVAL-KVRYRERITILRG 111 (288)
T ss_dssp EEEECBCTTC--------------HHHHHHHHHHHCCTTTSCEEECSCCCCSSSSHHHHHHHHHHH-HHHCTTTEEECCC
T ss_pred eEEEeeCCCC--------------HHHHHHHHHhcCCCccceEEecCcccCCCCcceeHHHHHHHH-HhhCCCeEEEecc
Confidence 8899999953 344445555443322234788999996543322211111111 2223456899999
Q ss_pred CCcc
Q 046241 411 NHER 414 (638)
Q Consensus 411 NHD~ 414 (638)
|||.
T Consensus 112 NHE~ 115 (288)
T d3c5wc1 112 NHES 115 (288)
T ss_dssp TTSS
T ss_pred CCcc
Confidence 9996
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.91 E-value=0.15 Score=40.71 Aligned_cols=20 Identities=20% Similarity=0.421 Sum_probs=17.6
Q ss_pred EEEEcCCCCCcEEEEEEeeC
Q 046241 288 TAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 288 ~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
...++||+|+|+|.|||..-
T Consensus 61 ~~~i~~L~p~t~Y~frV~A~ 80 (104)
T d1bpva_ 61 EFTVSGLTEDAAYEFRVIAK 80 (104)
T ss_dssp EEEECSCCSSCCEEEEEEEE
T ss_pred EEEEcCCCCCCEEEEEEEEE
Confidence 56789999999999999863
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.20 E-value=0.22 Score=49.17 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCCeEEEEccccc
Q 046241 517 VDAVEPLLLDNKVDLALFGHVHN 539 (638)
Q Consensus 517 r~~l~~Ll~k~~VdlvlsGH~H~ 539 (638)
.+.++..++++++++++=||.=.
T Consensus 233 ~~~~~~Fl~~n~l~lIIR~He~v 255 (324)
T d1s95a_ 233 PDVTKAFLEENNLDYIIRSHEVK 255 (324)
T ss_dssp HHHHHHHHHHHTCCEEEECCSCC
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46788899999999999999733
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=91.03 E-value=0.25 Score=48.14 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=40.3
Q ss_pred EEEEecCCCCCCCCCcccccCCChHHHHHHHHHHhhCCCccEEEEeCCcccCCCcHHHHHHHHHhhh-hhccCcceEEec
Q 046241 331 FLTYGDMGKAPLDDSAEHYIQPGSLSVIKAMADEVDNGSVDSIFHIGDISYATGFLVEWDFFLHQIS-PVASRVSYMTAI 409 (638)
Q Consensus 331 f~v~GD~g~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfvl~~GDi~y~~g~~~~wd~f~~~l~-~l~~~vP~~~v~ 409 (638)
+.++||+|.. ...+-++.+......-.-.+++||+++.+... .+-..-.+. .+...--++...
T Consensus 54 v~VvGDiHG~--------------~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~s--lE~i~lL~aLKi~~P~~v~lLR 117 (294)
T d1jk7a_ 54 LKICGDIHGQ--------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS--LETICLLLAYKIKYPENFFLLR 117 (294)
T ss_dssp EEEECBCTTC--------------HHHHHHHHHHHCCTTSSCEEECSCCSSSSSCH--HHHHHHHHHHHHHSTTTEEECC
T ss_pred eEEEEECCCC--------------hHhHHHHHhhcCCCccceEEeeccccCCCccc--hHHHHHHHHHHhhCCCeEEEec
Confidence 7899999953 33444555544333334478899999654332 222211111 222345689999
Q ss_pred CCCccC
Q 046241 410 GNHERD 415 (638)
Q Consensus 410 GNHD~~ 415 (638)
||||..
T Consensus 118 GNHE~~ 123 (294)
T d1jk7a_ 118 GNHECA 123 (294)
T ss_dssp CTTSSH
T ss_pred CCcccc
Confidence 999963
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.95 E-value=0.25 Score=39.18 Aligned_cols=20 Identities=25% Similarity=0.436 Sum_probs=17.6
Q ss_pred EEEEEcCCCCCcEEEEEEee
Q 046241 287 HTAVMTGLRPSATFSYRYGS 306 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~ 306 (638)
....|.+|+|+++|.+||..
T Consensus 61 ~~~~l~~L~p~t~Y~~rVRa 80 (100)
T d2gysa4 61 HSMALPALEPSTRYWARVRV 80 (100)
T ss_dssp SEEECCCCCSSCCCEEEEEE
T ss_pred eEEEeCCCCCCCeEEEEEEE
Confidence 36789999999999999965
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.80 E-value=0.32 Score=50.16 Aligned_cols=27 Identities=22% Similarity=0.057 Sum_probs=22.1
Q ss_pred HHHHHHHHHhCCCeEEEEcccccccee
Q 046241 517 VDAVEPLLLDNKVDLALFGHVHNYERT 543 (638)
Q Consensus 517 r~~l~~Ll~k~~VdlvlsGH~H~YeRt 543 (638)
.+.+...+++++.++++=||.=.-+-.
T Consensus 249 ~~a~~~FL~~n~L~~IIR~HE~~~~Gy 275 (473)
T d1auia_ 249 YPAVCEFLQHNNLLSILRAHEAQDAGY 275 (473)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCTTSE
T ss_pred hHHHHHHHHHcCCcEEEEcCcchhhhh
Confidence 467889999999999999998665433
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=88.15 E-value=0.48 Score=37.86 Aligned_cols=21 Identities=5% Similarity=0.009 Sum_probs=18.2
Q ss_pred EEEEEcCCCCCcEEEEEEeeC
Q 046241 287 HTAVMTGLRPSATFSYRYGSD 307 (638)
Q Consensus 287 h~a~l~gL~P~T~Y~Yrvg~~ 307 (638)
....|++|+|+|.|.+||..-
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~ 84 (105)
T d1cfba2 64 NNIVIADQPTFVKYLIKVVAI 84 (105)
T ss_dssp CEEEECSCCSSCEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEE
Confidence 467899999999999999763
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.00 E-value=0.18 Score=41.87 Aligned_cols=36 Identities=22% Similarity=0.171 Sum_probs=26.1
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeCC---------CCcceeeEEECC
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSDL---------VGWSDKIQFKTP 320 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~~---------~~~S~~~sF~T~ 320 (638)
......|+||+|+|+|.++|..-. +..|+...|+|.
T Consensus 80 ~~~~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~ 124 (125)
T d2dtge3 80 NHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD 124 (125)
T ss_dssp SCCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred ccCEEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence 445678999999999999997521 125666667764
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.02 E-value=1.7 Score=33.98 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=18.1
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCC
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDK 240 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~ 240 (638)
|..|.-+.+....+ .+.+.|+|.....
T Consensus 2 PdPP~nl~v~~~~~-~~~l~v~W~~P~~ 28 (94)
T d3d85d3 2 PDPPKNLQLKPLKN-SRQVEVSWEYPDT 28 (94)
T ss_dssp CCCCEEEEEEEC-----CEEEEEECCTT
T ss_pred CCCCcccEEEEecC-CCeEEEEecCCCC
Confidence 56788888877544 4679999997653
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.06 E-value=2.2 Score=33.62 Aligned_cols=24 Identities=4% Similarity=-0.180 Sum_probs=20.0
Q ss_pred eEEEEEEcCCCCCcEEEEEEeeCC
Q 046241 285 YIHTAVMTGLRPSATFSYRYGSDL 308 (638)
Q Consensus 285 ~~h~a~l~gL~P~T~Y~Yrvg~~~ 308 (638)
....+.+++|+|++.|.+||...+
T Consensus 66 ~~~~~~~~~L~~~t~Y~frV~A~N 89 (107)
T d1cd9b1 66 NNCSIPRKNLLLYQYMAIWVQAEN 89 (107)
T ss_dssp CEEEEEGGGCCTTSCEEEEEEEEE
T ss_pred cccEEEcCCCCcCceEEEEEEEEe
Confidence 445788999999999999998643
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.46 E-value=1.4 Score=34.25 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=41.1
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCCC----CcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCceEEE
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDKE----PQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGYIHT 288 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~~----~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~~h~ 288 (638)
|..|.-++..... .++|+++|.-.... .-.|+|........ .|. ..... .. ..
T Consensus 4 P~~P~n~~~~~~~--~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~---------~~~---~~~~~-------~~--~~ 60 (95)
T d1bqua1 4 PEKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHKFA---------DCK---AKRDT-------PT--SC 60 (95)
T ss_dssp CCCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEECC---------CEE---CCSSC-------TT--EE
T ss_pred cCCCeeeEEEEcc--CCEEEEEEeCcccCCCceEEEEEEEEccccee---------Eee---ccccc-------ce--ee
Confidence 5567666666543 57899999976543 22455543221100 000 00011 11 12
Q ss_pred EEEcCCCCCcEEEEEEeeCC
Q 046241 289 AVMTGLRPSATFSYRYGSDL 308 (638)
Q Consensus 289 a~l~gL~P~T~Y~Yrvg~~~ 308 (638)
..+.+|.|++.|++||...+
T Consensus 61 ~~~~~L~~~~~Y~f~V~A~N 80 (95)
T d1bqua1 61 TVDYSTVYFVNIEVWVEAEN 80 (95)
T ss_dssp ECSSCCCTTSCEEEEEEEEE
T ss_pred eeeeecCCCcEEEEEEEEEe
Confidence 35689999999999998643
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.18 E-value=0.36 Score=39.70 Aligned_cols=86 Identities=15% Similarity=0.093 Sum_probs=46.9
Q ss_pred CCCCceEEEeecCCCCCceEEEEEeCCC-------CCcEEEEcCCCCccceeeEeecCCcccccccCCCCCCcCccCCce
Q 046241 213 PKSPLYGHLSSSDSTATSMRVTWVSGDK-------EPQQVQYGDGKSETSKVTTFTQDDMCNATALQSPAKDFGWHDPGY 285 (638)
Q Consensus 213 ~~~P~~~~ls~~~~~~~sm~V~W~t~~~-------~~~~V~yg~~~~~~~~~~t~~~~~~c~~~~~~~pa~~~g~~~~g~ 285 (638)
|..|..+.+.... ..++|.|+|.-... ...++.|....... .... .. .+ .+-
T Consensus 11 p~pP~~v~v~~~~-s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~-~~~~--~~---------~~--------~~~ 69 (117)
T d2cspa1 11 PAPPQDVTVQAGV-TPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQ-RVAE--VI---------FP--------TAD 69 (117)
T ss_dssp CCCCEEEEECCCS-STTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSS-EEEE--EC---------CT--------TCS
T ss_pred CCCCCccEEEEec-CCCEEEEEEcCCCccccCcccccceEEEEEEeecc-ccee--ee---------ee--------ccc
Confidence 4467666664433 35789999985311 13456675321111 1100 00 01 122
Q ss_pred EEEEEEcCCCCCcEEEEEEeeCC----CCcceeeEEEC
Q 046241 286 IHTAVMTGLRPSATFSYRYGSDL----VGWSDKIQFKT 319 (638)
Q Consensus 286 ~h~a~l~gL~P~T~Y~Yrvg~~~----~~~S~~~sF~T 319 (638)
...+.|+||+|+|+|.+||..-+ ..+|+.-.++|
T Consensus 70 ~~~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 70 STAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp EEEEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCH
T ss_pred eeeeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeC
Confidence 34678999999999999997532 13555555554
|