Citrus Sinensis ID: 046277
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 380 | ||||||
| 255552418 | 416 | conserved hypothetical protein [Ricinus | 0.981 | 0.896 | 0.729 | 1e-167 | |
| 359477030 | 412 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 0.919 | 0.684 | 1e-156 | |
| 11094806 | 485 | hypothetical protein [Arabidopsis thalia | 0.976 | 0.764 | 0.684 | 1e-155 | |
| 79361624 | 445 | protein trichome berefringence-like 7 [A | 0.976 | 0.833 | 0.684 | 1e-155 | |
| 297847158 | 445 | hypothetical protein ARALYDRAFT_474028 [ | 0.963 | 0.822 | 0.685 | 1e-154 | |
| 224083418 | 334 | predicted protein [Populus trichocarpa] | 0.855 | 0.973 | 0.741 | 1e-148 | |
| 356528587 | 436 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.855 | 0.657 | 1e-148 | |
| 356511169 | 441 | PREDICTED: uncharacterized protein LOC10 | 0.957 | 0.825 | 0.661 | 1e-147 | |
| 449459278 | 428 | PREDICTED: uncharacterized protein LOC10 | 0.965 | 0.857 | 0.607 | 1e-147 | |
| 357519933 | 434 | hypothetical protein MTR_8g093530 [Medic | 0.984 | 0.861 | 0.657 | 1e-145 |
| >gi|255552418|ref|XP_002517253.1| conserved hypothetical protein [Ricinus communis] gi|223543624|gb|EEF45153.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 272/373 (72%), Positives = 324/373 (86%)
Query: 1 MLIVIGLFVSFIIFFAGGYIYVLPSLSPEFLGYSLSVFNNSMVGCDIFNGSWVLDDAYPL 60
+L+VIG ++F I GGYIYVLPSL+ F G+ +S N+S+ C++F G+WVLDD YPL
Sbjct: 42 VLVVIGSLLTFFIAIGGGYIYVLPSLTQAFYGFGISKSNDSIRNCNVFYGNWVLDDDYPL 101
Query: 61 YNASECPFAEQGFNCLGNGRSDNDYLKWRWKPKHCDLPRFDVYCILERFRNKRIVFVGDS 120
YNASECPFAEQGFNCLGNGR D DYLKWRWKPK+CD+PRF V+ +LERFRNKRI+FVGDS
Sbjct: 102 YNASECPFAEQGFNCLGNGRKDEDYLKWRWKPKNCDIPRFHVHDLLERFRNKRIIFVGDS 161
Query: 121 MSRTQWESLICLLMTRVEDKKSVYEVNGNNITKRIRFLGVRFSSFNFTIEFFRSVFLVQH 180
MSRTQWESL+CLLMT +EDKKSVYEVNGN ITKRIRFL VRF SFNFTIEFFRSVFLVQH
Sbjct: 162 MSRTQWESLVCLLMTGIEDKKSVYEVNGNKITKRIRFLSVRFRSFNFTIEFFRSVFLVQH 221
Query: 181 GLIPRHAPRRVTSTLKLDKLDNISNEWLHADILIFNTGQWWVPGKLFQVGCYFQVGNSLK 240
+PRH+P+RV STL+L+K+D+IS EW+++D+LIFNTGQWWVPGKLF+ GCYFQVGNS+K
Sbjct: 222 SWMPRHSPKRVRSTLRLNKMDDISGEWVNSDVLIFNTGQWWVPGKLFETGCYFQVGNSVK 281
Query: 241 LGMSIRTAFRLALGTWAAWVERSIDTNKTRVFFRTFEPSHWSDQSHRLCNVTQNPMTEPI 300
LGMSI AFR+AL TWA WV+ +IDTNKTRVFFRTFEPSHWSDQSHR CNVT++P +E
Sbjct: 282 LGMSIPAAFRIALDTWALWVQNTIDTNKTRVFFRTFEPSHWSDQSHRFCNVTRHPSSETG 341
Query: 301 GREHHVFSDSVLEVIKNMKIPITVLNITSLSSFRSDAHVGQWNDNQSAPDCAHWCLPGVP 360
GR+ FSD+VLEV+KN+ +PITVL+ITS+S+FR+DAHVG+WNDN PDC+HWCLPGVP
Sbjct: 342 GRDKSEFSDTVLEVVKNVTVPITVLHITSMSAFRTDAHVGEWNDNLPVPDCSHWCLPGVP 401
Query: 361 DVWNEIFFSCLFH 373
D+WNE+ S L +
Sbjct: 402 DMWNEVLLSFLLY 414
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477030|ref|XP_002275060.2| PREDICTED: uncharacterized protein LOC100257418 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|11094806|gb|AAG29735.1|AC084414_3 hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|79361624|ref|NP_175319.2| protein trichome berefringence-like 7 [Arabidopsis thaliana] gi|332194241|gb|AEE32362.1| protein trichome berefringence-like 7 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297847158|ref|XP_002891460.1| hypothetical protein ARALYDRAFT_474028 [Arabidopsis lyrata subsp. lyrata] gi|297337302|gb|EFH67719.1| hypothetical protein ARALYDRAFT_474028 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|224083418|ref|XP_002307018.1| predicted protein [Populus trichocarpa] gi|222856467|gb|EEE94014.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356528587|ref|XP_003532881.1| PREDICTED: uncharacterized protein LOC100777877 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356511169|ref|XP_003524302.1| PREDICTED: uncharacterized protein LOC100775841 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449459278|ref|XP_004147373.1| PREDICTED: uncharacterized protein LOC101220700 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357519933|ref|XP_003630255.1| hypothetical protein MTR_8g093530 [Medicago truncatula] gi|355524277|gb|AET04731.1| hypothetical protein MTR_8g093530 [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 380 | ||||||
| TAIR|locus:2028533 | 445 | TBL7 "AT1G48880" [Arabidopsis | 0.973 | 0.831 | 0.686 | 3.8e-149 | |
| TAIR|locus:2182157 | 464 | TBL11 "TRICHOME BIREFRINGENCE- | 0.776 | 0.635 | 0.435 | 9.4e-82 | |
| TAIR|locus:2080389 | 469 | TBL10 "TRICHOME BIREFRINGENCE- | 0.860 | 0.697 | 0.436 | 1.2e-79 | |
| TAIR|locus:2080767 | 427 | TBL8 "AT3G11570" [Arabidopsis | 0.968 | 0.861 | 0.400 | 3.1e-74 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.855 | 0.684 | 0.414 | 4e-74 | |
| TAIR|locus:2149947 | 485 | TBL5 "AT5G20590" [Arabidopsis | 0.865 | 0.678 | 0.411 | 4.6e-73 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.868 | 0.542 | 0.383 | 4.2e-69 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.878 | 0.600 | 0.398 | 6.3e-69 | |
| TAIR|locus:2155874 | 457 | TBL4 "AT5G49340" [Arabidopsis | 0.910 | 0.757 | 0.375 | 1.5e-65 | |
| TAIR|locus:2036631 | 541 | TBL2 "AT1G60790" [Arabidopsis | 0.95 | 0.667 | 0.361 | 4.7e-64 |
| TAIR|locus:2028533 TBL7 "AT1G48880" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 258/376 (68%), Positives = 314/376 (83%)
Query: 1 MLIVIGLFVSFIIFFAGGYIYVLPSLSPEFLGYSLSV-FNNSMVG---CDIFNGSWVLDD 56
+LI+ G VSF++ AGGY+YV+PSL FLGY+ ++ FN+S+VG CDIF+G+WV+DD
Sbjct: 67 VLIIAGTIVSFLVIIAGGYLYVVPSLGQTFLGYNGALEFNSSVVGDTECDIFDGNWVVDD 126
Query: 57 AYPLYNASECPFAEQGFNCLGNGRSDNDYLKWRWKPKHCDLPRFDVYCILERFRNKRIVF 116
YPLYNASECPF E+GFNCLGNGR ++YLKWRWKPKHC +PRF+V +L+R R KRIVF
Sbjct: 127 NYPLYNASECPFVEKGFNCLGNGRGHDEYLKWRWKPKHCTVPRFEVRDVLKRLRGKRIVF 186
Query: 117 VGDSMSRTQWESLICLLMTRVEDKKSVYEVNGNNITKRIRFLGVRFSSFNFTIEFFRSVF 176
VGDSMSRTQWESLIC+LMT +EDK+SVYEVNGNNITKRIRFLGVRFSS+NFT+EF+RSVF
Sbjct: 187 VGDSMSRTQWESLICMLMTGLEDKRSVYEVNGNNITKRIRFLGVRFSSYNFTVEFYRSVF 246
Query: 177 LVQHGLIPRHAPRRVTSTLKLDKLDNISNEWLHADILIFNTGQWWVPGKLFQVGCYFQVG 236
LVQ G + HAP+RV STLKLD LD I++EW AD LIFNTGQWWVPGKLF+ GCYFQVG
Sbjct: 247 LVQPGRLRWHAPKRVKSTLKLDVLDVINHEWSSADFLIFNTGQWWVPGKLFETGCYFQVG 306
Query: 237 NSLKLGMSIRTAFRLALGTWAAWVERSIDTNKTRVFFRTFEPSHWSDQSHRLCNVTQNPM 296
NSL+LGMSI A+R+AL TWA+W+E ++D NKTRV FRTFEPSHWSD HR CNVT+ P
Sbjct: 307 NSLRLGMSIPAAYRVALETWASWIESTVDPNKTRVLFRTFEPSHWSD--HRSCNVTKYPA 364
Query: 297 TEPIGREHHVFSDSVLEVIKNMKIPITVLNITSLSSFRSDAHVGQWNDNQSAPDCAHWCL 356
+ GR+ +FS+ + EV+KNM IP+++L++TS+S+FRSD HVG W+DN PDC+HWCL
Sbjct: 365 PDTEGRDKSIFSEMIKEVVKNMTIPVSILDVTSMSAFRSDGHVGLWSDNPLVPDCSHWCL 424
Query: 357 PGVPDVWNEIFFSCLF 372
PGVPD+WNEI LF
Sbjct: 425 PGVPDIWNEILLFFLF 440
|
|
| TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080389 TBL10 "TRICHOME BIREFRINGENCE-LIKE 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2080767 TBL8 "AT3G11570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2036631 TBL2 "AT1G60790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 380 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 5e-84 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 4e-83 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 1e-26 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 5e-84
Identities = 113/283 (39%), Positives = 148/283 (52%), Gaps = 25/283 (8%)
Query: 97 LPRFDVYCILERFRNKRIVFVGDSMSRTQWESLICLLMTRVEDKKSVYEVNGNNITKRIR 156
LPRFD LER R KR+VFVGDS+SR QWESL+CLL K E +G R
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDG-------R 53
Query: 157 FLGVRFSSFNFTIEFFRSVFLVQHGLIPRHAPRRVTSTLKLDKLDN-ISNEWLHADILIF 215
RF +N TIEF+ S FLV+ LKLD +D S W AD+L+F
Sbjct: 54 LFRFRFKDYNVTIEFYWSPFLVE-----SDNAEEGKRVLKLDSIDEKWSKLWPGADVLVF 108
Query: 216 NTGQWWVPGKLFQVGCYFQVGNSLKLGMSIRTAFRLALGTWAAWVERSIDTNKTRVFFRT 275
N+G WW+ K++ G + ++ K M A+R AL TWA WV+ ++ +KTRVFFRT
Sbjct: 109 NSGHWWLHRKVYI-GWDYCQKSNYK-EMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRT 166
Query: 276 FEPSHWSD---QSHRLCNVTQNPMTEPIGREHHVFS-DSVLEVIK--NMKIPITVLNITS 329
F P H+ + C T+ P+ + D V EV+ MK P+ +L+IT
Sbjct: 167 FSPVHFEGGEWNTGGSCYETE-PLLGSEYKGLTPEMIDIVNEVLSRAAMKTPVKLLDITL 225
Query: 330 LSSFRSDAHVGQWNDNQSAP---DCAHWCLPGVPDVWNEIFFS 369
LS +R D H + DC HWCLPGVPD WNE+ +
Sbjct: 226 LSQYRKDGHPSVYRKPGPPKKEQDCLHWCLPGVPDTWNELLLA 268
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 380 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.94 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.5 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 94.81 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 94.28 | |
| cd04502 | 171 | SGNH_hydrolase_like_7 Members of the SGNH-hydrolas | 81.59 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-111 Score=830.04 Aligned_cols=321 Identities=38% Similarity=0.811 Sum_probs=279.3
Q ss_pred CCCCCCccCccCceeeCCCCCCCCCCCCC-CCCCCCCccCCCCCCcccccceeecCCCCCCCCCHHHHHHHhcCCeEEEE
Q 046277 39 NNSMVGCDIFNGSWVLDDAYPLYNASECP-FAEQGFNCLGNGRSDNDYLKWRWKPKHCDLPRFDVYCILERFRNKRIVFV 117 (380)
Q Consensus 39 ~~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpD~~y~~WrWqP~~C~Lp~Fd~~~fl~~lrgK~i~FV 117 (380)
..+.++||+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||||||.+|||+|||||||||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 35678899999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ecchhhHHHHHHHHHHhhccCCCceEEEecCcceeeeeeeeeeEecccCeEEEEEecccceecCccccCCCCcceeeeee
Q 046277 118 GDSMSRTQWESLICLLMTRVEDKKSVYEVNGNNITKRIRFLGVRFSSFNFTIEFFRSVFLVQHGLIPRHAPRRVTSTLKL 197 (380)
Q Consensus 118 GDSl~Rnq~~SL~CLL~~~v~~~~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~~~~~~~l~l 197 (380)
||||+|||||||+|||+++++..+.... .+. .+.+|+|++||+||+||||||||+.+... + ...|+|
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~-~~~------~~~~~~F~~yN~TV~~ywspfLV~~~~~~----~--~~~l~L 193 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMS-RGD------PLSTFKFLDYGVSISFYKAPYLVDIDAVQ----G--KRVLKL 193 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeee-cCC------ceEEEEeccCCEEEEEEecceEEeeecCC----C--ceeEEe
Confidence 9999999999999999886654322211 122 23578999999999999999999976432 1 246999
Q ss_pred ccccccccccccccEEEEecccccCCCeecccceeeecCCcccccccHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecC
Q 046277 198 DKLDNISNEWLHADILIFNTGQWWVPGKLFQVGCYFQVGNSLKLGMSIRTAFRLALGTWAAWVERSIDTNKTRVFFRTFE 277 (380)
Q Consensus 198 D~~d~~~~~w~~~DvlV~ntG~Ww~~~~~~~~g~~~~~~~~~~~~~~~~~A~~~aL~t~~~wv~~~~~~~~~~vffRt~S 277 (380)
|++|..++.|+++|||||||||||.+.+....++|++.|+....+|++..||++||+||++||++++++.+++|||||+|
T Consensus 194 D~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~S 273 (387)
T PLN02629 194 EEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSIS 273 (387)
T ss_pred cCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecC
Confidence 99998888999999999999999998776665667888887777889999999999999999999999999999999999
Q ss_pred CCCCCC---CCC-----CCCcccCCCCCCCCCCCc-hhhHHHHHHHHHhcCCCEEEeecccccccccCCCCCCCCCC---
Q 046277 278 PSHWSD---QSH-----RLCNVTQNPMTEPIGREH-HVFSDSVLEVIKNMKIPITVLNITSLSSFRSDAHVGQWNDN--- 345 (380)
Q Consensus 278 P~Hf~~---~~G-----g~C~~~~~P~~~~~~~~~-~~~~~~v~e~~~~~~~~v~lLDIt~ls~~R~DgHps~y~~~--- 345 (380)
|+||+| |+| |+|++++.|+.+.+..+. ....+++++++++++.+|++||||+||++|||||||+|+++
T Consensus 274 P~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~ 353 (387)
T PLN02629 274 PTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSP 353 (387)
T ss_pred cccccCCCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCch
Confidence 999998 655 468877779876543221 22345889999999999999999999999999999999642
Q ss_pred ------CCCCCcccccCCCchhHHHHHHHHHHh
Q 046277 346 ------QSAPDCAHWCLPGVPDVWNEIFFSCLF 372 (380)
Q Consensus 346 ------~~~~DC~HWCLPGv~D~WNelL~~~L~ 372 (380)
..++||+||||||||||||||||++|+
T Consensus 354 ~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 354 SQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred hhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 357899999999999999999999996
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 380 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 6e-05
Identities = 59/325 (18%), Positives = 97/325 (29%), Gaps = 92/325 (28%)
Query: 22 VLPSLSPEFLGYSLSVFNNSMVGCDIFNGSWVLDDAYPLYNAS--ECPFAEQGF--NCLG 77
L L P +V + ++G G + A + + +C + F N L
Sbjct: 143 ALLELRPA-----KNVLIDGVLGS----GKTWV--ALDVCLSYKVQCKMDFKIFWLN-LK 190
Query: 78 NGRSDNDYLKWRWK------PKHCDLPRFDVYCILERFRNKRIVFVGDSMSR--TQWESL 129
N S L+ K P L RI + + R
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL------RIHSIQAELRRLLKSKPYE 244
Query: 130 ICLLMTR-VEDKKSVYEVNGNNITKRI----RFLGVRFSSFNFTIEFFRSVFLVQHGLIP 184
CLL+ V++ K N N++ +I RF V +F + + H
Sbjct: 245 NCLLVLLNVQNAK---AWNAFNLSCKILLTTRFKQV----TDFLSAATTTHISLDH---- 293
Query: 185 RHAPRRVTSTLKLDKLDNISNEWLHADILIFNTGQWWVPGKLFQVGCYFQVGNSLKLGMS 244
+ TL D++ ++ ++L P L + N +L +
Sbjct: 294 ------HSMTLTPDEVKSLLLKYLDCR-----------PQDLPREVL---TTNPRRLSI- 332
Query: 245 IRTAFRLALGTWAAWVERSID--TNKTRVFFRTFEPSHWSDQSHRLCNVTQNPMTEPIGR 302
I + R L TW W + D T EP+ + RL
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS------------- 379
Query: 303 EHHVFSDSVLEVIKNMKIPITVLNI 327
VF S IP +L++
Sbjct: 380 ---VFPPSA-------HIPTILLSL 394
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 380 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.86 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0046 Score=54.11 Aligned_cols=120 Identities=14% Similarity=0.147 Sum_probs=66.4
Q ss_pred ccccEEEEecccccCCCeecccceeeecCCcccccccHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCC
Q 046277 208 LHADILIFNTGQWWVPGKLFQVGCYFQVGNSLKLGMSIRTAFRLALGTWAAWVERSIDTNKTRVFFRTFEPSHWSDQSHR 287 (380)
Q Consensus 208 ~~~DvlV~ntG~Ww~~~~~~~~g~~~~~~~~~~~~~~~~~A~~~aL~t~~~wv~~~~~~~~~~vffRt~SP~Hf~~~~Gg 287 (380)
..+|+|||+.|..=.. ...+.|+..|+++.+-+.+. .+++++++-+..|.....
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~---- 126 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGE---- 126 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESG----
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcccc----
Confidence 3589999998864110 01346777777777766432 357789999988843110
Q ss_pred CCcccCCCCCCCCCC--CchhhHHHHHHHHHhcCCCEEEeecccccccccCCCCCCCCCCCCCCCcccccCCCchhHHHH
Q 046277 288 LCNVTQNPMTEPIGR--EHHVFSDSVLEVIKNMKIPITVLNITSLSSFRSDAHVGQWNDNQSAPDCAHWCLPGVPDVWNE 365 (380)
Q Consensus 288 ~C~~~~~P~~~~~~~--~~~~~~~~v~e~~~~~~~~v~lLDIt~ls~~R~DgHps~y~~~~~~~DC~HWCLPGv~D~WNe 365 (380)
+....... ....++++++++.++ ..+.++|+...+.- |+..+. ..|-+|.---| -..|-+
T Consensus 127 -------~~~~~~~~~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~~----~~~~~~----~~Dg~Hpn~~G-y~~~A~ 188 (200)
T 4h08_A 127 -------GMKEFAPITERLNVRNQIALKHINR--ASIEVNDLWKVVID----HPEYYA----GGDGTHPIDAG-YSALAN 188 (200)
T ss_dssp -------GGCEECTHHHHHHHHHHHHHHHHHH--TTCEEECHHHHHTT----CGGGTT----TSCSSSCCHHH-HHHHHH
T ss_pred -------cccccchhHHHHHHHHHHHHHHhhh--cceEEEecHHhHhc----CHHHhc----CCCCCCCCHHH-HHHHHH
Confidence 00000000 113456777777776 46889999876543 222221 25777754433 234444
Q ss_pred HHHHHH
Q 046277 366 IFFSCL 371 (380)
Q Consensus 366 lL~~~L 371 (380)
.+...|
T Consensus 189 ~i~~~i 194 (200)
T 4h08_A 189 QVIKVI 194 (200)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 380 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.75 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 84.32 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 84.12 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 81.53 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=96.75 E-value=0.002 Score=54.70 Aligned_cols=70 Identities=14% Similarity=0.181 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCCCCcccCCCCCCCCCCCchhhHHHHHHHHHhcCCCEEEe
Q 046277 246 RTAFRLALGTWAAWVERSIDTNKTRVFFRTFEPSHWSDQSHRLCNVTQNPMTEPIGREHHVFSDSVLEVIKNMKIPITVL 325 (380)
Q Consensus 246 ~~A~~~aL~t~~~wv~~~~~~~~~~vffRt~SP~Hf~~~~Gg~C~~~~~P~~~~~~~~~~~~~~~v~e~~~~~~~~v~lL 325 (380)
.+.|+..|+++++-+.+ ....+++-+..| ++.. ..... +. ......++++++++.++. .+.++
T Consensus 92 ~~~~~~~l~~li~~~~~----~~~~~vl~~~~~-~~~~-----~~~~~-~~----~~~~~~~~~~~~~~a~~~--~v~~v 154 (208)
T d2o14a2 92 EAEFKEVMRDMIRQVKA----KGADVILSTPQG-RATD-----FTSEG-IH----SSVNRWYRASILALAEEE--KTYLI 154 (208)
T ss_dssp HHHHHHHHHHHHHHHHT----TTCEEEEECCCC-CTTC-----BCTTS-CB----CCTTSTTHHHHHHHHHHT--TCEEE
T ss_pred HHHHHHHHHHHHHHHHh----cCCceeeccccc-cccc-----ccccc-ch----HHHHHHHHHHHHHhhccC--CcEEe
Confidence 45677788887765532 244455544433 2111 00000 10 011134577888877774 57789
Q ss_pred ecccccc
Q 046277 326 NITSLSS 332 (380)
Q Consensus 326 DIt~ls~ 332 (380)
|++.++.
T Consensus 155 D~~~~~~ 161 (208)
T d2o14a2 155 DLNVLSS 161 (208)
T ss_dssp CHHHHHH
T ss_pred ccHHHHH
Confidence 9877653
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
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| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
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| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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